BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012777
(456 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 152/288 (52%), Gaps = 21/288 (7%)
Query: 129 PSTAPMHVQNAREVPEYEIDPKELDFSNSVEITK-GTFRIASWRGTQVAVKTLGEEVFTD 187
P+T ++ Q A + + +I +L+ + GT A W G+ VAVK L E+ F
Sbjct: 16 PTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHA 75
Query: 188 EDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGA---L 244
E +V F+ E+A+++++RHPN+V F+GAVTQ + IVTEYL +G L L + GA L
Sbjct: 76 E-RVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQL 134
Query: 245 KPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFAN 304
+ A D+A+GMNYLH NR I+HRDL+ N+L D +KV DFGLS+L
Sbjct: 135 DERRRLSMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXF 193
Query: 305 TVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVP 364
+ T E + APEV ++E + K DV+SF +IL E+ P+ +V
Sbjct: 194 LXSKXAAGTPE-----WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVV 248
Query: 365 KAYIANERPPFRAPTTHYAYGLR----ELIEDCWSEEPFRRPTFRQIL 408
A F+ L +IE CW+ EP++RP+F I+
Sbjct: 249 AAV------GFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIM 290
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 129 PSTAPMHVQNAREVPEYEIDPKELDFSNSVEITK-GTFRIASWRGTQVAVKTLGEEVFTD 187
P+T ++ Q A + + +I +L+ + GT A W G+ VAVK L E+ F
Sbjct: 16 PTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHA 75
Query: 188 EDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGA---L 244
E +V F+ E+A+++++RHPN+V F+GAVTQ + IVTEYL +G L L + GA L
Sbjct: 76 E-RVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQL 134
Query: 245 KPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFAN 304
+ A D+A+GMNYLH NR I+HR+L+ N+L D +KV DFGLS+ LK +
Sbjct: 135 DERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR-LKAST 192
Query: 305 TVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVP 364
+ E + APEV ++E + K DV+SF +IL E+ P+ +V
Sbjct: 193 FLSSKSAAGTPE----WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVV 248
Query: 365 KAYIANERPPFRAPTTHYAYGLR----ELIEDCWSEEPFRRPTFRQIL 408
A F+ L +IE CW+ EP++RP+F I+
Sbjct: 249 AAV------GFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIM 290
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 148/284 (52%), Gaps = 32/284 (11%)
Query: 144 EYEIDPKELDFSNSVEITKGTF---RIASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELA 199
++ IDP EL F EI G F + W +VA+KT+ E ++ED FI+E
Sbjct: 2 KWVIDPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAE 55
Query: 200 LLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDIAR 258
++ K+ HP +VQ G + P+ +VTE++ G L YL+ Q+G + LD+
Sbjct: 56 VMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 115
Query: 259 GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCE 315
GM YL E +IHRDL N L ++ +KV+DFG+++ + ++ ++ PV
Sbjct: 116 GMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV--- 169
Query: 316 ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMI-EGCPPFPTKQEKEVPKAYIANER-- 372
++A+PEV+ Y +K DV+SF +++ E+ EG P+ + EV + R
Sbjct: 170 ----KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY 225
Query: 373 PPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISD 416
P R +TH + +++ CW E P RP F ++L +L +I++
Sbjct: 226 KP-RLASTH----VYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 145/281 (51%), Gaps = 32/281 (11%)
Query: 147 IDPKELDFSNSVEITKGTF---RIASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQ 202
IDP EL F EI G F + W +VA+KT+ E ++ED FI+E ++
Sbjct: 4 IDPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMM 57
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDIARGMN 261
K+ HP +VQ G + P+ +V E++ G L YL+ Q+G + LD+ GM
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 117
Query: 262 YLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETS 318
YL E +IHRDL N L ++ +KV+DFG+++ + ++ ++ PV
Sbjct: 118 YLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV------ 168
Query: 319 WRYAAPEVYKNEEYDTKVDVFSFALILQEMI-EGCPPFPTKQEKEVPKAYIANER--PPF 375
++A+PEV+ Y +K DV+SF +++ E+ EG P+ + EV + R P
Sbjct: 169 -KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP- 226
Query: 376 RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISD 416
R +TH + +++ CW E P RP F ++L +L +I++
Sbjct: 227 RLASTH----VYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 263
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 147/284 (51%), Gaps = 32/284 (11%)
Query: 144 EYEIDPKELDFSNSVEITKGTF---RIASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELA 199
++ IDP EL F EI G F + W +VA+KT+ E ++ED FI+E
Sbjct: 4 KWVIDPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAE 57
Query: 200 LLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDIAR 258
++ K+ HP +VQ G + P+ +V E++ G L YL+ Q+G + LD+
Sbjct: 58 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 117
Query: 259 GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCE 315
GM YL E +IHRDL N L ++ +KV+DFG+++ + ++ ++ PV
Sbjct: 118 GMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV--- 171
Query: 316 ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMI-EGCPPFPTKQEKEVPKAYIANER-- 372
++A+PEV+ Y +K DV+SF +++ E+ EG P+ + EV + R
Sbjct: 172 ----KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY 227
Query: 373 PPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISD 416
P R +TH + +++ CW E P RP F ++L +L +I++
Sbjct: 228 KP-RLASTH----VYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 145/281 (51%), Gaps = 32/281 (11%)
Query: 147 IDPKELDFSNSVEITKGTF---RIASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQ 202
IDP EL F EI G F + W +VA+KT+ E ++ED FI+E ++
Sbjct: 2 IDPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMM 55
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDIARGMN 261
K+ HP +VQ G + P+ +V E++ G L YL+ Q+G + LD+ GM
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 115
Query: 262 YLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETS 318
YL E +IHRDL N L ++ +KV+DFG+++ + ++ ++ PV
Sbjct: 116 YLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV------ 166
Query: 319 WRYAAPEVYKNEEYDTKVDVFSFALILQEMI-EGCPPFPTKQEKEVPKAYIANER--PPF 375
++A+PEV+ Y +K DV+SF +++ E+ EG P+ + EV + R P
Sbjct: 167 -KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP- 224
Query: 376 RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISD 416
R +TH + +++ CW E P RP F ++L +L +I++
Sbjct: 225 RLASTH----VYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 144/280 (51%), Gaps = 32/280 (11%)
Query: 147 IDPKELDFSNSVEITKGTF---RIASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQ 202
IDP EL F EI G F + W +VA+KT+ E ++ED FI+E ++
Sbjct: 4 IDPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMM 57
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDIARGMN 261
K+ HP +VQ G + P+ +V E++ G L YL+ Q+G + LD+ GM
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 117
Query: 262 YLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETS 318
YL E ++IHRDL N L ++ +KV+DFG+++ + ++ ++ PV
Sbjct: 118 YLEE---ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV------ 168
Query: 319 WRYAAPEVYKNEEYDTKVDVFSFALILQEMI-EGCPPFPTKQEKEVPKAYIANER--PPF 375
++A+PEV+ Y +K DV+SF +++ E+ EG P+ + EV + R P
Sbjct: 169 -KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP- 226
Query: 376 RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDIS 415
R +TH + +++ CW E P RP F ++L +L I+
Sbjct: 227 RLASTH----VYQIMNHCWKERPEDRPAFSRLLRQLAAIA 262
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 145/281 (51%), Gaps = 32/281 (11%)
Query: 147 IDPKELDFSNSVEITKGTF---RIASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQ 202
IDP EL F EI G F + W +VA+KT+ E +++D FI+E ++
Sbjct: 24 IDPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDD----FIEEAEVMM 77
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDIARGMN 261
K+ HP +VQ G + P+ +V E++ G L YL+ Q+G + LD+ GM
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 137
Query: 262 YLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETS 318
YL E +IHRDL N L ++ +KV+DFG+++ + ++ ++ PV
Sbjct: 138 YLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV------ 188
Query: 319 WRYAAPEVYKNEEYDTKVDVFSFALILQEMI-EGCPPFPTKQEKEVPKAYIANER--PPF 375
++A+PEV+ Y +K DV+SF +++ E+ EG P+ + EV + R P
Sbjct: 189 -KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP- 246
Query: 376 RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISD 416
R +TH + +++ CW E P RP F ++L +L +I++
Sbjct: 247 RLASTH----VYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 283
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 137/263 (52%), Gaps = 27/263 (10%)
Query: 163 GTFRIASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTP 221
G ++ W+G VAVK + E ++++ F E + K+ HP +V+F G ++ P
Sbjct: 22 GVVKLGKWKGQYDVAVKMIKEGSMSEDE----FFQEAQTMMKLSHPKLVKFYGVCSKEYP 77
Query: 222 MMIVTEYLPKGDLRAYLKQKG-ALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSN 280
+ IVTEY+ G L YL+ G L+P+ ++ D+ GM +L ++ IHRDL N
Sbjct: 78 IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARN 134
Query: 281 ILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVD 337
L D +KV+DFG+++ + ++ ++V PV +++APEV+ +Y +K D
Sbjct: 135 CLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPV-------KWSAPEVFHYFKYSSKSD 187
Query: 338 VFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERP--PFRAPTTHYAYGLRELIEDCW 394
V++F +++ E+ G P+ EV R P A T Y +++ CW
Sbjct: 188 VWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIY-----QIMYSCW 242
Query: 395 SEEPFRRPTFRQILMRLDDISDQ 417
E P +RPTF+Q+L ++ + ++
Sbjct: 243 HELPEKRPTFQQLLSSIEPLREK 265
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 137/265 (51%), Gaps = 26/265 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ S + VA+KTL +V E + + F+ E +++ + HPN+++ G VT+
Sbjct: 31 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 88
Query: 219 STPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLE 277
S P+MIVTEY+ G L ++L++ A + + L IA GM YL + +HRDL
Sbjct: 89 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 145
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEEY 332
NIL + + KV+DFGLS++L ED P T R+ +PE ++
Sbjct: 146 ARNILINSNLVCKVSDFGLSRVL-------EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 198
Query: 333 DTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLREL 389
+ DV+S+ ++L E++ G P+ ++V KA R PP P Y +L
Sbjct: 199 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QL 253
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDI 414
+ DCW ++ RP F QI+ LD +
Sbjct: 254 MLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 137/265 (51%), Gaps = 26/265 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ S + VA+KTL +V E + + F+ E +++ + HPN+++ G VT+
Sbjct: 48 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 105
Query: 219 STPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLE 277
S P+MIVTEY+ G L ++L++ A + + L IA GM YL + +HRDL
Sbjct: 106 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 162
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEEY 332
NIL + + KV+DFGLS++L ED P T R+ +PE ++
Sbjct: 163 ARNILINSNLVCKVSDFGLSRVL-------EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 215
Query: 333 DTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLREL 389
+ DV+S+ ++L E++ G P+ ++V KA R PP P Y +L
Sbjct: 216 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QL 270
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDI 414
+ DCW ++ RP F QI+ LD +
Sbjct: 271 MLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 137/265 (51%), Gaps = 26/265 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ S + VA+KTL +V E + + F+ E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 219 STPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLE 277
S P+MIVTEY+ G L ++L++ A + + L IA GM YL + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGFVHRDLA 174
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEEY 332
NIL + + KV+DFGLS++L ED P T R+ +PE ++
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVL-------EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 333 DTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLREL 389
+ DV+S+ ++L E++ G P+ ++V KA R PP P Y +L
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QL 282
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDI 414
+ DCW ++ RP F QI+ LD +
Sbjct: 283 MLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 137/265 (51%), Gaps = 26/265 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ S + VA+KTL +V E + + F+ E +++ + HPN+++ G VT+
Sbjct: 58 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 115
Query: 219 STPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLE 277
S P+MIVTEY+ G L ++L++ A + + L IA GM YL + +HRDL
Sbjct: 116 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 172
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEEY 332
NIL + + KV+DFGLS++L ED P T R+ +PE ++
Sbjct: 173 ARNILINSNLVCKVSDFGLSRVL-------EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 225
Query: 333 DTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLREL 389
+ DV+S+ ++L E++ G P+ ++V KA R PP P Y +L
Sbjct: 226 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QL 280
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDI 414
+ DCW ++ RP F QI+ LD +
Sbjct: 281 MLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 137/265 (51%), Gaps = 26/265 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ S + VA+KTL +V E + + F+ E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 219 STPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLE 277
S P+MIVTEY+ G L ++L++ A + + L IA GM YL + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEEY 332
NIL + + KV+DFGLS++L ED P T R+ +PE ++
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVL-------EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 333 DTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLREL 389
+ DV+S+ ++L E++ G P+ ++V KA R PP P Y +L
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QL 282
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDI 414
+ DCW ++ RP F QI+ LD +
Sbjct: 283 MLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 137/265 (51%), Gaps = 26/265 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ S + VA+KTL +V E + + F+ E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 219 STPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLE 277
S P+MIVTEY+ G L ++L++ A + + L IA GM YL + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEEY 332
NIL + + KV+DFGLS++L ED P T R+ +PE ++
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVL-------EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 333 DTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLREL 389
+ DV+S+ ++L E++ G P+ ++V KA R PP P Y +L
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QL 282
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDI 414
+ DCW ++ RP F QI+ LD +
Sbjct: 283 MLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 137/265 (51%), Gaps = 26/265 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ S + VA+KTL +V E + + F+ E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 219 STPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLE 277
S P+MIVTEY+ G L ++L++ A + + L IA GM YL + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEEY 332
NIL + + KV+DFGLS++L ED P T R+ +PE ++
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVL-------EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 333 DTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLREL 389
+ DV+S+ ++L E++ G P+ ++V KA R PP P Y +L
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QL 282
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDI 414
+ DCW ++ RP F QI+ LD +
Sbjct: 283 MLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 137/265 (51%), Gaps = 26/265 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ S + VA+KTL +V E + + F+ E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 219 STPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLE 277
S P+MIVTEY+ G L ++L++ A + + L IA GM YL + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEEY 332
NIL + + KV+DFGLS++L ED P T R+ +PE ++
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVL-------EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 333 DTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLREL 389
+ DV+S+ ++L E++ G P+ ++V KA R PP P Y +L
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QL 282
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDI 414
+ DCW ++ RP F QI+ LD +
Sbjct: 283 MLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 138/274 (50%), Gaps = 27/274 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ R VA+KTL + +TD+ + + F+ E +++ + HPN++ G VT+
Sbjct: 29 EVCSGRLKVPGKREICVAIKTL-KAGYTDKQR-RDFLSEASIMGQFDHPNIIHLEGVVTK 86
Query: 219 STPMMIVTEYLPKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLE 277
P+MI+TEY+ G L A+L K G V I GM YL + + +HRDL
Sbjct: 87 CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSYVHRDLA 143
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEEY 332
NIL + + KV+DFG+S++L ED P T R+ APE ++
Sbjct: 144 ARNILVNSNLVCKVSDFGMSRVL-------EDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 196
Query: 333 DTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLREL 389
+ DV+S+ +++ E++ G P+ ++V KA R PP P L +L
Sbjct: 197 TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIA-----LHQL 251
Query: 390 IEDCWSEEPFRRPTFRQILMRLDD-ISDQLSIKR 422
+ DCW +E RP F QI+ LD I + S+KR
Sbjct: 252 MLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKR 285
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 138/274 (50%), Gaps = 27/274 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ R VA+KTL + +TD+ + + F+ E +++ + HPN++ G VT+
Sbjct: 23 EVCSGRLKVPGKREICVAIKTL-KAGYTDKQR-RDFLSEASIMGQFDHPNIIHLEGVVTK 80
Query: 219 STPMMIVTEYLPKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLE 277
P+MI+TEY+ G L A+L K G V I GM YL + + +HRDL
Sbjct: 81 CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSYVHRDLA 137
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEEY 332
NIL + + KV+DFG+S++L ED P T R+ APE ++
Sbjct: 138 ARNILVNSNLVCKVSDFGMSRVL-------EDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 190
Query: 333 DTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLREL 389
+ DV+S+ +++ E++ G P+ ++V KA R PP P L +L
Sbjct: 191 TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIA-----LHQL 245
Query: 390 IEDCWSEEPFRRPTFRQILMRLDD-ISDQLSIKR 422
+ DCW +E RP F QI+ LD I + S+KR
Sbjct: 246 MLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKR 279
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 138/274 (50%), Gaps = 27/274 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ R VA+KTL + +TD+ + + F+ E +++ + HPN++ G VT+
Sbjct: 44 EVCSGRLKVPGKREICVAIKTL-KAGYTDKQR-RDFLSEASIMGQFDHPNIIHLEGVVTK 101
Query: 219 STPMMIVTEYLPKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLE 277
P+MI+TEY+ G L A+L K G V I GM YL + + +HRDL
Sbjct: 102 CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSAVHRDLA 158
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEEY 332
NIL + + KV+DFG+S++L ED P T R+ APE ++
Sbjct: 159 ARNILVNSNLVCKVSDFGMSRVL-------EDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
Query: 333 DTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLREL 389
+ DV+S+ +++ E++ G P+ ++V KA R PP P L +L
Sbjct: 212 TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIA-----LHQL 266
Query: 390 IEDCWSEEPFRRPTFRQILMRLDD-ISDQLSIKR 422
+ DCW +E RP F QI+ LD I + S+KR
Sbjct: 267 MLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKR 300
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 137/265 (51%), Gaps = 26/265 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ S + VA+KTL +V E + + F+ E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 219 STPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLE 277
S P+MIVTEY+ G L ++L++ A + + L IA GM YL + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEEY 332
NIL + + KV+DFGL+++L ED P T R+ +PE ++
Sbjct: 175 ARNILINSNLVCKVSDFGLARVL-------EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 333 DTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLREL 389
+ DV+S+ ++L E++ G P+ ++V KA R PP P Y +L
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QL 282
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDI 414
+ DCW ++ RP F QI+ LD +
Sbjct: 283 MLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 136/265 (51%), Gaps = 26/265 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ S + VA+KTL +V E + + F+ E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 219 STPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLE 277
S P+MIVTEY+ G L ++L++ A + + L IA GM YL + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEEY 332
NIL + + KV+DFGL ++L ED P T R+ +PE ++
Sbjct: 175 ARNILINSNLVCKVSDFGLGRVL-------EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 333 DTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLREL 389
+ DV+S+ ++L E++ G P+ ++V KA R PP P Y +L
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QL 282
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDI 414
+ DCW ++ RP F QI+ LD +
Sbjct: 283 MLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 134/263 (50%), Gaps = 22/263 (8%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ R VA+KTL +V E + + F+ E +++ + HPNVV G VT+
Sbjct: 58 EVCSGRLKLPGKRDVAVAIKTL--KVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTR 115
Query: 219 STPMMIVTEYLPKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLE 277
P+MIV E++ G L A+L K G V IA GM YL + +HRDL
Sbjct: 116 GKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADM---GYVHRDLA 172
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEEY 332
NIL + + KV+DFGLS+++ ED P T+ R+ APE + ++
Sbjct: 173 ARNILVNSNLVCKVSDFGLSRVI-------EDDPEAVYTTTGGKIPVRWTAPEAIQYRKF 225
Query: 333 DTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIE 391
+ DV+S+ +++ E++ G P+ ++V KA R P AP A GL +L+
Sbjct: 226 TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP--APMDCPA-GLHQLML 282
Query: 392 DCWSEEPFRRPTFRQILMRLDDI 414
DCW +E RP F QI+ LD +
Sbjct: 283 DCWQKERAERPKFEQIVGILDKM 305
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 136/260 (52%), Gaps = 14/260 (5%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ R VA+KTL + +T++ + + F+ E +++ + HPNV+ G VT+
Sbjct: 48 EVCSGHLKLPGKREIFVAIKTL-KSGYTEKQR-RDFLSEASIMGQFDHPNVIHLEGVVTK 105
Query: 219 STPMMIVTEYLPKGDLRAYLKQK-GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLE 277
STP+MI+TE++ G L ++L+Q G V IA GM YL + +HRDL
Sbjct: 106 STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLA 162
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVD 337
NIL + + KV+DFGLS+ L+ + + R+ APE + ++ + D
Sbjct: 163 ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASD 222
Query: 338 VFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCW 394
V+S+ +++ E++ G P+ ++V A + R PP P+ L +L+ DCW
Sbjct: 223 VWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPS-----ALHQLMLDCW 277
Query: 395 SEEPFRRPTFRQILMRLDDI 414
++ RP F QI+ LD +
Sbjct: 278 QKDRNHRPKFGQIVNTLDKM 297
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 136/265 (51%), Gaps = 26/265 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ S + VA+KTL +V E + + F+ E +++ + HPN+++ G VT+
Sbjct: 31 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 88
Query: 219 STPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLE 277
S P+MIVTE + G L ++L++ A + + L IA GM YL + +HRDL
Sbjct: 89 SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 145
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEEY 332
NIL + + KV+DFGLS++L ED P T R+ +PE ++
Sbjct: 146 ARNILINSNLVCKVSDFGLSRVL-------EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 198
Query: 333 DTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLREL 389
+ DV+S+ ++L E++ G P+ ++V KA R PP P Y +L
Sbjct: 199 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QL 253
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDI 414
+ DCW ++ RP F QI+ LD +
Sbjct: 254 MLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 147/282 (52%), Gaps = 38/282 (13%)
Query: 145 YEIDPKELDFSNSVEITKGTF---RIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALL 201
+ ++ KEL + I KG F + +RG +VAVK + ++ +AF+ E +++
Sbjct: 16 WALNMKELKLLQT--IGKGEFGDVMLGDYRGNKVAVKCI-----KNDATAQAFLAEASVM 68
Query: 202 QKIRHPNVVQFLGAVTQ-STPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIAR 258
++RH N+VQ LG + + + IVTEY+ KG L YL+ +G L +KF+LD+
Sbjct: 69 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 128
Query: 259 GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDR-PVTCEET 317
M YL N +HRDL N+L + KV+DFGL+K + ++T + PV
Sbjct: 129 AMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPV----- 178
Query: 318 SWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKE----VPKAYIANER 372
++ APE + +++ TK DV+SF ++L E+ G P+P K+ V K Y +
Sbjct: 179 --KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD-- 234
Query: 373 PPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
P P Y E++++CW + RP+F Q+ +L+ I
Sbjct: 235 APDGCPPAVY-----EVMKNCWHLDAAMRPSFLQLREQLEHI 271
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 136/265 (51%), Gaps = 26/265 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ S + VA+KTL +V E + + F+ E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 219 STPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLE 277
S P+MIVTE + G L ++L++ A + + L IA GM YL + +HRDL
Sbjct: 118 SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEEY 332
NIL + + KV+DFGLS++L ED P T R+ +PE ++
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVL-------EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 333 DTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLREL 389
+ DV+S+ ++L E++ G P+ ++V KA R PP P Y +L
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QL 282
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDI 414
+ DCW ++ RP F QI+ LD +
Sbjct: 283 MLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 136/265 (51%), Gaps = 26/265 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ S + VA+KTL +V E + + F+ E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 219 STPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLE 277
S P+MIVTE + G L ++L++ A + + L IA GM YL + +HRDL
Sbjct: 118 SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGAVHRDLA 174
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEEY 332
NIL + + KV+DFGLS++L ED P T R+ +PE ++
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVL-------EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 333 DTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLREL 389
+ DV+S+ ++L E++ G P+ ++V KA R PP P Y +L
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QL 282
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDI 414
+ DCW ++ RP F QI+ LD +
Sbjct: 283 MLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 147/282 (52%), Gaps = 38/282 (13%)
Query: 145 YEIDPKELDFSNSVEITKGTF---RIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALL 201
+ ++ KEL + I KG F + +RG +VAVK + ++ +AF+ E +++
Sbjct: 1 WALNMKELKLLQT--IGKGEFGDVMLGDYRGNKVAVKCI-----KNDATAQAFLAEASVM 53
Query: 202 QKIRHPNVVQFLGAVTQSTP-MMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIAR 258
++RH N+VQ LG + + + IVTEY+ KG L YL+ +G L +KF+LD+
Sbjct: 54 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 113
Query: 259 GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDR-PVTCEET 317
M YL N +HRDL N+L + KV+DFGL+K + ++T + PV
Sbjct: 114 AMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPV----- 163
Query: 318 SWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKE----VPKAYIANER 372
++ APE + +++ TK DV+SF ++L E+ G P+P K+ V K Y +
Sbjct: 164 --KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD-- 219
Query: 373 PPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
P P Y E++++CW + RP+F Q+ +L+ I
Sbjct: 220 APDGCPPAVY-----EVMKNCWHLDAAMRPSFLQLREQLEHI 256
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 135/260 (51%), Gaps = 14/260 (5%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ R VA+KTL + +T++ + + F+ E +++ + HPNV+ G VT+
Sbjct: 22 EVCSGHLKLPGKREIFVAIKTL-KSGYTEKQR-RDFLSEASIMGQFDHPNVIHLEGVVTK 79
Query: 219 STPMMIVTEYLPKGDLRAYLKQK-GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLE 277
STP+MI+TE++ G L ++L+Q G V IA GM YL + +HR L
Sbjct: 80 STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRALA 136
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVD 337
NIL + + KV+DFGLS+ L+ + + R+ APE + ++ + D
Sbjct: 137 ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASD 196
Query: 338 VFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCW 394
V+S+ +++ E++ G P+ ++V A + R PP P+ L +L+ DCW
Sbjct: 197 VWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPS-----ALHQLMLDCW 251
Query: 395 SEEPFRRPTFRQILMRLDDI 414
++ RP F QI+ LD +
Sbjct: 252 QKDRNHRPKFGQIVNTLDKM 271
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 147/282 (52%), Gaps = 38/282 (13%)
Query: 145 YEIDPKELDFSNSVEITKGTF---RIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALL 201
+ ++ KEL + I KG F + +RG +VAVK + ++ +AF+ E +++
Sbjct: 188 WALNMKELKLLQT--IGKGEFGDVMLGDYRGNKVAVKCI-----KNDATAQAFLAEASVM 240
Query: 202 QKIRHPNVVQFLGAVTQSTP-MMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIAR 258
++RH N+VQ LG + + + IVTEY+ KG L YL+ +G L +KF+LD+
Sbjct: 241 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 300
Query: 259 GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDR-PVTCEET 317
M YL N +HRDL N+L + KV+DFGL+K + ++T + PV
Sbjct: 301 AMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPV----- 350
Query: 318 SWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKE----VPKAYIANER 372
++ APE + +++ TK DV+SF ++L E+ G P+P K+ V K Y +
Sbjct: 351 --KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD-- 406
Query: 373 PPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
P P Y +++++CW + RPTF Q+ +L+ I
Sbjct: 407 APDGCPPAVY-----DVMKNCWHLDAATRPTFLQLREQLEHI 443
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 145/282 (51%), Gaps = 38/282 (13%)
Query: 145 YEIDPKELDFSNSVEITKGTF---RIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALL 201
+ ++ KEL + I KG F + +RG +VAVK + ++ +AF+ E +++
Sbjct: 7 WALNMKELKLLQT--IGKGEFGDVMLGDYRGNKVAVKCI-----KNDATAQAFLAEASVM 59
Query: 202 QKIRHPNVVQFLGAVTQ-STPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIAR 258
++RH N+VQ LG + + + IVTEY+ KG L YL+ +G L +KF+LD+
Sbjct: 60 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 119
Query: 259 GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDR-PVTCEET 317
M YL N +HRDL N+L + KV+DFGL+K + ++T + PV
Sbjct: 120 AMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPV----- 169
Query: 318 SWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKE----VPKAYIANER 372
++ APE + + TK DV+SF ++L E+ G P+P K+ V K Y +
Sbjct: 170 --KWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD-- 225
Query: 373 PPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
P P Y E++++CW + RP+F Q+ +L+ I
Sbjct: 226 APDGCPPAVY-----EVMKNCWHLDAAMRPSFLQLREQLEHI 262
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 147/310 (47%), Gaps = 54/310 (17%)
Query: 129 PSTAPMHVQNAREVPEYEIDPKELDFSNSVEITK-GTFRIASWRGT-QVAVKTLGEEVFT 186
PSTA + + +EIDPK+L F + + G + WRG VA+K + E +
Sbjct: 9 PSTAGLGYGS------WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS 62
Query: 187 DEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ-KGALK 245
+++ FI+E ++ + H +VQ G T+ P+ I+TEY+ G L YL++ + +
Sbjct: 63 EDE----FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ 118
Query: 246 PTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL---KF 302
++ D+ M YL + +HRDL N L +D G +KV+DFGLS+ + ++
Sbjct: 119 TQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175
Query: 303 ANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEK 361
++V PV R++ PEV ++ +K D+++F +++ E+ G P+
Sbjct: 176 TSSVGSKFPV-------RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY------ 222
Query: 362 EVPKAYIANERPPFRAPTTHYAYGLR------------ELIEDCWSEEPFRRPTFRQILM 409
ER H A GLR ++ CW E+ RPTF+ +L
Sbjct: 223 ---------ERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 273
Query: 410 RLDDISDQLS 419
+ D+ D+ S
Sbjct: 274 NILDVMDEES 283
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 143/282 (50%), Gaps = 24/282 (8%)
Query: 145 YEIDPKELDFSNSVEITK-GTFRIASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQ 202
+EIDPK+L F + + G + WRG VA+K + E ++++ FI+E ++
Sbjct: 10 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMM 65
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ-KGALKPTLAVKFALDIARGMN 261
+ H +VQ G T+ P+ I+TEY+ G L YL++ + + ++ D+ M
Sbjct: 66 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 125
Query: 262 YLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETS 318
YL + +HRDL N L +D G +KV+DFGLS+ + ++ ++V PV
Sbjct: 126 YLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV------ 176
Query: 319 WRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRA 377
R++ PEV ++ +K D+++F +++ E+ G P+ E + +IA +R
Sbjct: 177 -RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE-HIAQGLRLYRP 234
Query: 378 PTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
+ + ++ CW E+ RPTF+ +L + D+ D+ S
Sbjct: 235 HLA--SEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEES 274
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 131/265 (49%), Gaps = 26/265 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ G ++ R VA+KTL +V E + + F+ E +++ + HPN++ G VT+
Sbjct: 37 EVCSGRLKLPGKRELPVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTK 94
Query: 219 STPMMIVTEYLPKGDLRAYLKQK-GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLE 277
S P+MIVTEY+ G L +LK+ G V I+ GM YL + +HRDL
Sbjct: 95 SKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDM---GYVHRDLA 151
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEEY 332
NIL + + KV+DFGLS++L ED P T R+ APE ++
Sbjct: 152 ARNILINSNLVCKVSDFGLSRVL-------EDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
Query: 333 DTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLREL 389
+ DV+S+ +++ E++ G P+ ++V KA R P P Y +L
Sbjct: 205 TSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALY-----QL 259
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDI 414
+ DCW +E RP F +I+ LD +
Sbjct: 260 MLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 141/294 (47%), Gaps = 48/294 (16%)
Query: 145 YEIDPKELDFSNSVEITK-GTFRIASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQ 202
+EIDPK+L F + + G + WRG VA+K + E ++++ FI+E ++
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMM 58
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ-KGALKPTLAVKFALDIARGMN 261
+ H +VQ G T+ P+ I+TEY+ G L YL++ + + ++ D+ M
Sbjct: 59 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 118
Query: 262 YLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETS 318
YL + +HRDL N L +D G +KV+DFGLS+ + ++ ++V PV
Sbjct: 119 YLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV------ 169
Query: 319 WRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRA 377
R++ PEV ++ +K D+++F +++ E+ G P+ ER
Sbjct: 170 -RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY---------------ERFTNSE 213
Query: 378 PTTHYAYGLR------------ELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
H A GLR ++ CW E+ RPTF+ +L + D+ D+ S
Sbjct: 214 TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEES 267
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 140/292 (47%), Gaps = 48/292 (16%)
Query: 145 YEIDPKELDFSNSVEITK-GTFRIASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQ 202
+EIDPK+L F + + G + WRG VA+K + E ++++ FI+E ++
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMM 59
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ-KGALKPTLAVKFALDIARGMN 261
+ H +VQ G T+ P+ I+TEY+ G L YL++ + + ++ D+ M
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 119
Query: 262 YLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETS 318
YL + +HRDL N L +D G +KV+DFGLS+ + ++ ++V PV
Sbjct: 120 YLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV------ 170
Query: 319 WRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRA 377
R++ PEV ++ +K D+++F +++ E+ G P+ ER
Sbjct: 171 -RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY---------------ERFTNSE 214
Query: 378 PTTHYAYGLR------------ELIEDCWSEEPFRRPTFRQILMRLDDISDQ 417
H A GLR ++ CW E+ RPTF+ +L + D+ D+
Sbjct: 215 TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 266
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 133/274 (48%), Gaps = 35/274 (12%)
Query: 147 IDPKELDFSNSVEITKGTFRI---ASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQK 203
ID KE++ V +G F + A WR VA+K + E + KAFI EL L +
Sbjct: 6 IDYKEIEVEEVV--GRGAFGVVCKAKWRAKDVAIKQI-----ESESERKAFIVELRQLSR 58
Query: 204 IRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGAL---KPTLAVKFALDIARGM 260
+ HPN+V+ GA P+ +V EY G L L L A+ + L ++G+
Sbjct: 59 VNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 116
Query: 261 NYLHENRPEAIIHRDLEPSNILRDDSGH-LKVADFGLSKLLKFANTVKEDRPVTCEETSW 319
YLH +P+A+IHRDL+P N+L G LK+ DFG + ++ +T + S
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--------MTNNKGSA 168
Query: 320 RYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIA-----NERPP 374
+ APEV++ Y K DVFS+ +IL E+I PF E P I RPP
Sbjct: 169 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF---DEIGGPAFRIMWAVHNGTRPP 225
Query: 375 FRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ + L+ CWS++P +RP+ +I+
Sbjct: 226 L---IKNLPKPIESLMTRCWSKDPSQRPSMEEIV 256
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 133/274 (48%), Gaps = 35/274 (12%)
Query: 147 IDPKELDFSNSVEITKGTFRI---ASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQK 203
ID KE++ V +G F + A WR VA+K + E + KAFI EL L +
Sbjct: 5 IDYKEIEVEEVV--GRGAFGVVCKAKWRAKDVAIKQI-----ESESERKAFIVELRQLSR 57
Query: 204 IRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGAL---KPTLAVKFALDIARGM 260
+ HPN+V+ GA P+ +V EY G L L L A+ + L ++G+
Sbjct: 58 VNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 115
Query: 261 NYLHENRPEAIIHRDLEPSNILRDDSGH-LKVADFGLSKLLKFANTVKEDRPVTCEETSW 319
YLH +P+A+IHRDL+P N+L G LK+ DFG + ++ +T + S
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--------MTNNKGSA 167
Query: 320 RYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIA-----NERPP 374
+ APEV++ Y K DVFS+ +IL E+I PF E P I RPP
Sbjct: 168 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF---DEIGGPAFRIMWAVHNGTRPP 224
Query: 375 FRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ + L+ CWS++P +RP+ +I+
Sbjct: 225 L---IKNLPKPIESLMTRCWSKDPSQRPSMEEIV 255
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 146/310 (47%), Gaps = 54/310 (17%)
Query: 129 PSTAPMHVQNAREVPEYEIDPKELDFSNSVEITK-GTFRIASWRGT-QVAVKTLGEEVFT 186
PSTA + + +EIDPK+L F + + G + WRG VA+K + E +
Sbjct: 9 PSTAGLGYGS------WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS 62
Query: 187 DEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ-KGALK 245
+++ FI+E ++ + H +VQ G T+ P+ I+TEY+ G L YL++ + +
Sbjct: 63 EDE----FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ 118
Query: 246 PTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL---KF 302
++ D+ M YL + +HRDL N L +D G +KV+DFGLS+ + +
Sbjct: 119 TQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE 175
Query: 303 ANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEK 361
++V PV R++ PEV ++ +K D+++F +++ E+ G P+
Sbjct: 176 TSSVGSKFPV-------RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY------ 222
Query: 362 EVPKAYIANERPPFRAPTTHYAYGLR------------ELIEDCWSEEPFRRPTFRQILM 409
ER H A GLR ++ CW E+ RPTF+ +L
Sbjct: 223 ---------ERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 273
Query: 410 RLDDISDQLS 419
+ D+ D+ S
Sbjct: 274 NILDVMDEES 283
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 170/363 (46%), Gaps = 42/363 (11%)
Query: 63 VNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPLADAVYYKHHDVIKLL 122
++ D D L+V + +R L S G + ++ S A Y KH D +
Sbjct: 188 LSVSDFDNAKGLNVKHYK-----IRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGL-CH 241
Query: 123 EEHGAKPSTAPMHVQNAREVPEYEIDPKELDFSNSVEITKGTFR---IASWRGT-QVAVK 178
P++ P A++ +EI + L V++ +G F + +W GT +VA+K
Sbjct: 242 RLTTVCPTSKPQTQGLAKDA--WEIPRESLRLE--VKLGQGCFGEVWMGTWNGTTRVAIK 297
Query: 179 TLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYL 238
TL + E AF+ E +++K+RH +VQ L AV P+ IVTEY+ KG L +L
Sbjct: 298 TLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFL 352
Query: 239 KQKGA--LKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGL 296
K + L+ V A IA GM Y+ +HRDL +NIL ++ KVADFGL
Sbjct: 353 KGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGL 409
Query: 297 SKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQEM-IEGC 352
++L+ ED T + + ++ APE + K DV+SF ++L E+ +G
Sbjct: 410 ARLI-------EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 462
Query: 353 PPFPTKQEKEVPKAYIANERPPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
P+P +EV R P P + L +L+ CW +EP RPTF +
Sbjct: 463 VPYPGMVNREVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKEPEERPTFEYLQAF 517
Query: 411 LDD 413
L+D
Sbjct: 518 LED 520
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 139/292 (47%), Gaps = 48/292 (16%)
Query: 147 IDPKELDFSNSVEITK-GTFRIASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKI 204
IDPK+L F + + G + WRG VA+K + E ++++ FI+E ++ +
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNL 56
Query: 205 RHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ-KGALKPTLAVKFALDIARGMNYL 263
H +VQ G T+ P+ I+TEY+ G L YL++ + + ++ D+ M YL
Sbjct: 57 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 116
Query: 264 HENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWR 320
+ +HRDL N L +D G +KV+DFGLS+ + ++ ++V PV R
Sbjct: 117 ESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-------R 166
Query: 321 YAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPT 379
++ PEV ++ +K D+++F +++ E+ G P+ ER
Sbjct: 167 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY---------------ERFTNSETA 211
Query: 380 THYAYGLR------------ELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
H A GLR ++ CW E+ RPTF+ +L + D+ D+ S
Sbjct: 212 EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEES 263
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 171/363 (47%), Gaps = 42/363 (11%)
Query: 63 VNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPLADAVYYKHHDVIKLL 122
++ D D L+V + +R L S G + ++ S A Y KH D +
Sbjct: 105 LSVSDFDNAKGLNVKHYK-----IRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGL-CH 158
Query: 123 EEHGAKPSTAPMHVQNAREVPEYEIDPKELDFSNSVEITKGTFR---IASWRGT-QVAVK 178
P++ P A++ +EI P+E V++ +G F + +W GT +VA+K
Sbjct: 159 RLTTVCPTSKPQTQGLAKDA--WEI-PRE-SLRLEVKLGQGCFGEVWMGTWNGTTRVAIK 214
Query: 179 TLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYL 238
TL + E AF+ E +++K+RH +VQ L AV P+ IVTEY+ KG L +L
Sbjct: 215 TLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFL 269
Query: 239 KQKGA--LKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGL 296
K + L+ V A IA GM Y+ +HRDL +NIL ++ KVADFGL
Sbjct: 270 KGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGL 326
Query: 297 SKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQEM-IEGC 352
++L+ ED T + + ++ APE + K DV+SF ++L E+ +G
Sbjct: 327 ARLI-------EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
Query: 353 PPFPTKQEKEVPKAYIANERPPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
P+P +EV R P P + L +L+ CW +EP RPTF +
Sbjct: 380 VPYPGMVNREVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKEPEERPTFEYLQAF 434
Query: 411 LDD 413
L+D
Sbjct: 435 LED 437
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 171/363 (47%), Gaps = 42/363 (11%)
Query: 63 VNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPLADAVYYKHHDVIKLL 122
++ D D L+V + +R L S G + ++ S A Y KH D +
Sbjct: 105 LSVSDFDNAKGLNVKHYK-----IRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGL-CH 158
Query: 123 EEHGAKPSTAPMHVQNAREVPEYEIDPKELDFSNSVEITKGTFR---IASWRGT-QVAVK 178
P++ P A++ +EI P+E V++ +G F + +W GT +VA+K
Sbjct: 159 RLTTVCPTSKPQTQGLAKDA--WEI-PRE-SLRLEVKLGQGCFGEVWMGTWNGTTRVAIK 214
Query: 179 TLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYL 238
TL + E AF+ E +++K+RH +VQ L AV P+ IVTEY+ KG L +L
Sbjct: 215 TLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFL 269
Query: 239 KQKGA--LKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGL 296
K + L+ V A IA GM Y+ +HRDL +NIL ++ KVADFGL
Sbjct: 270 KGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGL 326
Query: 297 SKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQEM-IEGC 352
++L+ ED T + + ++ APE + K DV+SF ++L E+ +G
Sbjct: 327 ARLI-------EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
Query: 353 PPFPTKQEKEVPKAYIANERPPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
P+P +EV R P P + L +L+ CW +EP RPTF +
Sbjct: 380 VPYPGMVNREVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKEPEERPTFEYLQAF 434
Query: 411 LDD 413
L+D
Sbjct: 435 LED 437
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 132/266 (49%), Gaps = 27/266 (10%)
Query: 159 EITKGTFRIASWRG-TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT 217
E+ KG + +S + VA+KTL + +T++ +V F+ E ++ + H N+++ G ++
Sbjct: 59 EVYKGMLKTSSGKKEVPVAIKTL-KAGYTEKQRVD-FLGEAGIMGQFSHHNIIRLEGVIS 116
Query: 218 QSTPMMIVTEYLPKGDLRAYLKQK-GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
+ PMMI+TEY+ G L +L++K G V IA GM YL +HRDL
Sbjct: 117 KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDL 173
Query: 277 EPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAAPEVYKNEE 331
NIL + + KV+DFGLS++L ED P TS R+ APE +
Sbjct: 174 AARNILVNSNLVCKVSDFGLSRVL-------EDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 332 YDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRE 388
+ + DV+SF +++ E M G P+ EV KA R P P+ Y +
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIY-----Q 281
Query: 389 LIEDCWSEEPFRRPTFRQILMRLDDI 414
L+ CW +E RRP F I+ LD +
Sbjct: 282 LMMQCWQQERARRPKFADIVSILDKL 307
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 140/279 (50%), Gaps = 24/279 (8%)
Query: 145 YEIDPKELDFSNSVEITK-GTFRIASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQ 202
+EIDPK+L F + + G + WRG VA+K + E ++++ FI+E ++
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMM 59
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ-KGALKPTLAVKFALDIARGMN 261
+ H +VQ G T+ P+ I+TEY+ G L YL++ + + ++ D+ M
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 119
Query: 262 YLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETS 318
YL + +HRDL N L +D G +KV+DFGLS+ + ++ ++ PV
Sbjct: 120 YLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV------ 170
Query: 319 WRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRA 377
R++ PEV ++ +K D+++F +++ E+ G P+ E + +IA +R
Sbjct: 171 -RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE-HIAQGLRLYRP 228
Query: 378 PTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISD 416
+ + ++ CW E+ RPTF+ +L + D+ D
Sbjct: 229 HLA--SEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 136/260 (52%), Gaps = 14/260 (5%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G + + + VA+KTL + +T+ + + F+ E +++ + HPN+++ G VT
Sbjct: 31 EVCRGRLKAPGKKESCVAIKTL-KGGYTERQR-REFLSEASIMGQFEHPNIIRLEGVVTN 88
Query: 219 STPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLE 277
S P+MI+TE++ G L ++L+ G V IA GM YL E + +HRDL
Sbjct: 89 SMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE---MSYVHRDLA 145
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVD 337
NIL + + KV+DFGLS+ L+ ++ + + R+ APE ++ + D
Sbjct: 146 ARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASD 205
Query: 338 VFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCW 394
+S+ +++ E++ G P+ ++V A + R PP PT+ L +L+ DCW
Sbjct: 206 AWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTS-----LHQLMLDCW 260
Query: 395 SEEPFRRPTFRQILMRLDDI 414
++ RP F Q++ LD +
Sbjct: 261 QKDRNARPRFPQVVSALDKM 280
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 132/259 (50%), Gaps = 27/259 (10%)
Query: 163 GTFRIASWRG-TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTP 221
G + +W G T+VA+KTL + E +F++E +++K++H +VQ L AV P
Sbjct: 23 GEVWMGTWNGNTKVAIKTLKPGTMSPE----SFLEEAQIMKKLKHDKLVQ-LYAVVSEEP 77
Query: 222 MMIVTEYLPKGDLRAYLK--QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPS 279
+ IVTEY+ KG L +LK + ALK V A +A GM Y+ IHRDL +
Sbjct: 78 IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSA 134
Query: 280 NILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKV 336
NIL + K+ADFGL++L+ ED T + + ++ APE + K
Sbjct: 135 NILVGNGLICKIADFGLARLI-------EDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 337 DVFSFALILQEMI-EGCPPFPTKQEKEVPKAYIANERPPFRAPTTH-YAYGLRELIEDCW 394
DV+SF ++L E++ +G P+P +EV + +R P L EL+ CW
Sbjct: 188 DVWSFGILLTELVTKGRVPYPGMNNREV----LEQVERGYRMPCPQDCPISLHELMIHCW 243
Query: 395 SEEPFRRPTFRQILMRLDD 413
++P RPTF + L+D
Sbjct: 244 KKDPEERPTFEYLQSFLED 262
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 135/271 (49%), Gaps = 32/271 (11%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 26 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 135
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ F P+ ++ APE ++
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI-------KWTAPESLAYNKFS 188
Query: 334 TKVDVFSFALILQEMIE-GCPPFPT---KQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPE-GCPEKVY-----EL 242
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDISDQLSI 420
+ CW P RP+F +I + + + SI
Sbjct: 243 MRACWQWNPSDRPSFAEIHQAFETMFQESSI 273
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 139/287 (48%), Gaps = 32/287 (11%)
Query: 137 QNAREVPEYEID-PKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFI 195
++A E+P I K L E+ G + T+VAVKTL + V+AF+
Sbjct: 5 KDAWEIPRESIKLVKRLGAGQFGEVWMGYYN----NSTKVAVKTLKPGTMS----VQAFL 56
Query: 196 DELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFA 253
+E L++ ++H +V+ VT+ P+ I+TEY+ KG L +LK K L + F+
Sbjct: 57 EEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFS 116
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVT 313
IA GM Y+ IHRDL +N+L +S K+ADFGL++++ ED T
Sbjct: 117 AQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVI-------EDNEYT 166
Query: 314 CEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIA 369
E + ++ APE + K DV+SF ++L E++ G P+P + +V A
Sbjct: 167 AREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQ 226
Query: 370 NERPPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
R P P Y ++++ CW E+ RPTF + LDD
Sbjct: 227 GYRMPRVENCPDELY-----DIMKMCWKEKAEERPTFDYLQSVLDDF 268
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 125/256 (48%), Gaps = 33/256 (12%)
Query: 163 GTFRIASWR--GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST 220
G + W+ VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T
Sbjct: 46 GEVYVGVWKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEP 101
Query: 221 PMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEP 278
P IVTEY+P G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 102 PFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN---FIHRDLAA 158
Query: 279 SNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
N L ++ +KVADFGLS+L+ + P+ ++ APE + K
Sbjct: 159 RNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI-------KWTAPESLAYNTFSIK 211
Query: 336 VDVFSFALILQEMIE-GCPPFPTKQEKEV----PKAYIANERPPFRAPTTHYAYGLRELI 390
DV++F ++L E+ G P+P +V K Y E+P P + EL+
Sbjct: 212 SDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGY-RMEQPEGCPPKVY------ELM 264
Query: 391 EDCWSEEPFRRPTFRQ 406
CW P RP+F +
Sbjct: 265 RACWKWSPADRPSFAE 280
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 139/282 (49%), Gaps = 26/282 (9%)
Query: 146 EIDPKELDFSNSVEITK-GTFRIASWRGTQVAVKTLGEEVFTDED---KVKAFIDELALL 201
EID EL + I G A W G +VAVK + DED ++ E L
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHD--PDEDISQTIENVRQEAKLF 60
Query: 202 QKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMN 261
++HPN++ G + + +V E+ G L L K + P + V +A+ IARGMN
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDILVNWAVQIARGMN 119
Query: 262 YLHENRPEAIIHRDLEPSNIL---RDDSGH-----LKVADFGLSKLLKFANTVKEDRPVT 313
YLH+ IIHRDL+ SNIL + ++G LK+ DFGL++ ++ T K
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHRTTK-----M 172
Query: 314 CEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAY-IANER 372
++ + APEV + + DV+S+ ++L E++ G PF + + AY +A +
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF--RGIDGLAVAYGVAMNK 230
Query: 373 PPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
P+T +L+EDCW+ +P RP+F IL +L I
Sbjct: 231 LALPIPST-CPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 128/264 (48%), Gaps = 33/264 (12%)
Query: 171 RGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYL 229
R T+VAVK L + E + I E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 59 RVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 230 PKGDLRAYLKQKGALKPTLAVKF------------------ALDIARGMNYLHENRPEAI 271
KG+LR YL+ + P L F A +ARGM YL +
Sbjct: 117 SKGNLREYLQARRP--PGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---C 171
Query: 272 IHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEE 331
IHRDL N+L + +K+ADFGL++ + + K+ T ++ APE +
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK---TTNGRLPVKWMAPEALFDRI 228
Query: 332 YDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELI 390
Y + DV+SF ++L E+ G P+P +E+ K R + T+ Y ++
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY---MMM 285
Query: 391 EDCWSEEPFRRPTFRQILMRLDDI 414
DCW P +RPTF+Q++ LD I
Sbjct: 286 RDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 135/271 (49%), Gaps = 32/271 (11%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 33 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 142
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-------KWTAPESLAYNKFS 195
Query: 334 TKVDVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 249
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDISDQLSI 420
+ CW P RP+F +I + + + SI
Sbjct: 250 MRACWQWNPSDRPSFAEIHQAFETMFQESSI 280
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 135/271 (49%), Gaps = 32/271 (11%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 28 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 137
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-------KWTAPESLAYNKFS 190
Query: 334 TKVDVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 244
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDISDQLSI 420
+ CW P RP+F +I + + + SI
Sbjct: 245 MRACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 131/272 (48%), Gaps = 22/272 (8%)
Query: 150 KELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNV 209
K + +S E+ G R+ R VA+K L + +T+ + + F+ E +++ + HPN+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-KAGYTERQR-RDFLSEASIMGQFDHPNI 112
Query: 210 VQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDIARGMNYLHENRP 268
++ G VT+ MIVTEY+ G L +L+ G V + GM YL +
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD--- 169
Query: 269 EAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-----RYAA 323
+HRDL N+L D + KV+DFGLS++L ED P T+ R+ A
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL-------EDDPDAAXTTTGGKIPIRWTA 222
Query: 324 PEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHY 382
PE + + DV+SF +++ E++ G P+ ++V + R P H
Sbjct: 223 PEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPH- 281
Query: 383 AYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
L +L+ DCW ++ +RP F QI+ LD +
Sbjct: 282 --ALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 135/271 (49%), Gaps = 32/271 (11%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 33 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 142
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-------KWTAPESLAYNKFS 195
Query: 334 TKVDVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 249
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDISDQLSI 420
+ CW P RP+F +I + + + SI
Sbjct: 250 MRACWQWNPSDRPSFAEIHQAFETMFQESSI 280
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 135/271 (49%), Gaps = 32/271 (11%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 28 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 137
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-------KWTAPESLAYNKFS 190
Query: 334 TKVDVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 244
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDISDQLSI 420
+ CW P RP+F +I + + + SI
Sbjct: 245 MRACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 135/271 (49%), Gaps = 32/271 (11%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 30 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 139
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-------KWTAPESLAYNKFS 192
Query: 334 TKVDVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 246
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDISDQLSI 420
+ CW P RP+F +I + + + SI
Sbjct: 247 MRACWQWNPSDRPSFAEIHQAFETMFQESSI 277
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 135/271 (49%), Gaps = 32/271 (11%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 30 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 139
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-------KWTAPESLAYNKFS 192
Query: 334 TKVDVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 246
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDISDQLSI 420
+ CW P RP+F +I + + + SI
Sbjct: 247 MRACWQWNPSDRPSFAEIHQAFETMFQESSI 277
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 170/363 (46%), Gaps = 42/363 (11%)
Query: 63 VNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPLADAVYYKHHDVIKLL 122
++ D D L+V + +R L S G + ++ S A Y KH D +
Sbjct: 105 LSVSDFDNAKGLNVKHYK-----IRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGL-CH 158
Query: 123 EEHGAKPSTAPMHVQNAREVPEYEIDPKELDFSNSVEITKGTFR---IASWRGT-QVAVK 178
P++ P A++ +EI P+E V++ +G F + +W GT +VA+K
Sbjct: 159 RLTTVCPTSKPQTQGLAKDA--WEI-PRE-SLRLEVKLGQGCFGEVWMGTWNGTTRVAIK 214
Query: 179 TLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYL 238
TL + E AF+ E +++K+RH +VQ L AV P+ IV EY+ KG L +L
Sbjct: 215 TLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVGEYMSKGSLLDFL 269
Query: 239 KQKGA--LKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGL 296
K + L+ V A IA GM Y+ +HRDL +NIL ++ KVADFGL
Sbjct: 270 KGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGL 326
Query: 297 SKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQEM-IEGC 352
++L+ ED T + + ++ APE + K DV+SF ++L E+ +G
Sbjct: 327 ARLI-------EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
Query: 353 PPFPTKQEKEVPKAYIANERPPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
P+P +EV R P P + L +L+ CW +EP RPTF +
Sbjct: 380 VPYPGMVNREVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKEPEERPTFEYLQAF 434
Query: 411 LDD 413
L+D
Sbjct: 435 LED 437
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 135/271 (49%), Gaps = 32/271 (11%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 41 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 150
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 151 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-------KWTAPESLAYNKFS 203
Query: 334 TKVDVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 204 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 257
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDISDQLSI 420
+ CW P RP+F +I + + + SI
Sbjct: 258 MRACWQWNPSDRPSFAEIHQAFETMFQESSI 288
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 131/272 (48%), Gaps = 22/272 (8%)
Query: 150 KELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNV 209
K + +S E+ G R+ R VA+K L + +T+ + + F+ E +++ + HPN+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-KAGYTERQR-RDFLSEASIMGQFDHPNI 112
Query: 210 VQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDIARGMNYLHENRP 268
++ G VT+ MIVTEY+ G L +L+ G V + GM YL +
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD--- 169
Query: 269 EAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRP-----VTCEETSWRYAA 323
+HRDL N+L D + KV+DFGLS++L ED P T + R+ A
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL-------EDDPDAAYTTTGGKIPIRWTA 222
Query: 324 PEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHY 382
PE + + DV+SF +++ E++ G P+ ++V + R P H
Sbjct: 223 PEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPH- 281
Query: 383 AYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
L +L+ DCW ++ +RP F QI+ LD +
Sbjct: 282 --ALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 135/271 (49%), Gaps = 32/271 (11%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 30 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 139
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-------KWTAPESLAYNKFS 192
Query: 334 TKVDVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 246
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDISDQLSI 420
+ CW P RP+F +I + + + SI
Sbjct: 247 MRACWQWNPSDRPSFAEIHQAFETMFQESSI 277
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 135/271 (49%), Gaps = 32/271 (11%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 29 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 138
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-------KWTAPESLAYNKFS 191
Query: 334 TKVDVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 245
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDISDQLSI 420
+ CW P RP+F +I + + + SI
Sbjct: 246 MRACWQWNPSDRPSFAEIHQAFETMFQESSI 276
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 138/267 (51%), Gaps = 28/267 (10%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G + + + VA+KTL + +T+ + + F+ E +++ + HPN+++ G VT
Sbjct: 29 EVCRGRLKAPGKKESCVAIKTL-KGGYTERQR-REFLSEASIMGQFEHPNIIRLEGVVTN 86
Query: 219 STPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLE 277
S P+MI+TE++ G L ++L+ G V IA GM YL E + +HRDL
Sbjct: 87 SMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE---MSYVHRDLA 143
Query: 278 PSNILRDDSGHLKVADFGLSKLLK-------FANTVKEDRPVTCEETSWRYAAPEVYKNE 330
NIL + + KV+DFGLS+ L+ + +++ P+ R+ APE
Sbjct: 144 ARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPI-------RWTAPEAIAFR 196
Query: 331 EYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLR 387
++ + D +S+ +++ E++ G P+ ++V A + R PP PT+ L
Sbjct: 197 KFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTS-----LH 251
Query: 388 ELIEDCWSEEPFRRPTFRQILMRLDDI 414
+L+ DCW ++ RP F Q++ LD +
Sbjct: 252 QLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 29/262 (11%)
Query: 171 RGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYL 229
R T+VAVK L + E + I E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 52 RVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 109
Query: 230 PKGDLRAYLKQK----------------GALKPTLAVKFALDIARGMNYLHENRPEAIIH 273
KG+LR YL+ + L V A +ARGM YL + IH
Sbjct: 110 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 166
Query: 274 RDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
RDL N+L + +K+ADFGL++ + + K+ T ++ APE + Y
Sbjct: 167 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK---TTNGRLPVKWMAPEALFDRIYT 223
Query: 334 TKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIED 392
+ DV+SF ++L E+ G P+P +E+ K R + T+ Y ++ D
Sbjct: 224 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY---MMMRD 280
Query: 393 CWSEEPFRRPTFRQILMRLDDI 414
CW P +RPTF+Q++ LD I
Sbjct: 281 CWHAVPSQRPTFKQLVEDLDRI 302
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 29/262 (11%)
Query: 171 RGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYL 229
R T+VAVK L + E + I E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 59 RVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 230 PKGDLRAYLKQK----------------GALKPTLAVKFALDIARGMNYLHENRPEAIIH 273
KG+LR YL+ + L V A +ARGM YL + IH
Sbjct: 117 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 173
Query: 274 RDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
RDL N+L + +K+ADFGL++ + + K+ T ++ APE + Y
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK---TTNGRLPVKWMAPEALFDRIYT 230
Query: 334 TKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIED 392
+ DV+SF ++L E+ G P+P +E+ K R + T+ Y ++ D
Sbjct: 231 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY---MMMRD 287
Query: 393 CWSEEPFRRPTFRQILMRLDDI 414
CW P +RPTF+Q++ LD I
Sbjct: 288 CWHAVPSQRPTFKQLVEDLDRI 309
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 29/262 (11%)
Query: 171 RGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYL 229
R T+VAVK L + E + I E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 51 RVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 108
Query: 230 PKGDLRAYLKQK----------------GALKPTLAVKFALDIARGMNYLHENRPEAIIH 273
KG+LR YL+ + L V A +ARGM YL + IH
Sbjct: 109 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 165
Query: 274 RDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
RDL N+L + +K+ADFGL++ + + K+ T ++ APE + Y
Sbjct: 166 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK---TTNGRLPVKWMAPEALFDRIYT 222
Query: 334 TKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIED 392
+ DV+SF ++L E+ G P+P +E+ K R + T+ Y ++ D
Sbjct: 223 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY---MMMRD 279
Query: 393 CWSEEPFRRPTFRQILMRLDDI 414
CW P +RPTF+Q++ LD I
Sbjct: 280 CWHAVPSQRPTFKQLVEDLDRI 301
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 29/262 (11%)
Query: 171 RGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYL 229
R T+VAVK L + E + I E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 48 RVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 105
Query: 230 PKGDLRAYLKQK----------------GALKPTLAVKFALDIARGMNYLHENRPEAIIH 273
KG+LR YL+ + L V A +ARGM YL + IH
Sbjct: 106 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 162
Query: 274 RDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
RDL N+L + +K+ADFGL++ + + K+ T ++ APE + Y
Sbjct: 163 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK---TTNGRLPVKWMAPEALFDRIYT 219
Query: 334 TKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIED 392
+ DV+SF ++L E+ G P+P +E+ K R + T+ Y ++ D
Sbjct: 220 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY---MMMRD 276
Query: 393 CWSEEPFRRPTFRQILMRLDDI 414
CW P +RPTF+Q++ LD I
Sbjct: 277 CWHAVPSQRPTFKQLVEDLDRI 298
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 29/262 (11%)
Query: 171 RGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYL 229
R T+VAVK L + E + I E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 59 RVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 230 PKGDLRAYLKQK----------------GALKPTLAVKFALDIARGMNYLHENRPEAIIH 273
KG+LR YL+ + L V A +ARGM YL + IH
Sbjct: 117 SKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 173
Query: 274 RDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
RDL N+L + +K+ADFGL++ + + K+ T ++ APE + Y
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK---TTNGRLPVKWMAPEALFDRIYT 230
Query: 334 TKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIED 392
+ DV+SF ++L E+ G P+P +E+ K R + T+ Y ++ D
Sbjct: 231 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY---MMMRD 287
Query: 393 CWSEEPFRRPTFRQILMRLDDI 414
CW P +RPTF+Q++ LD I
Sbjct: 288 CWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 170/363 (46%), Gaps = 42/363 (11%)
Query: 63 VNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPLADAVYYKHHDVIKLL 122
++ D D L+V + +R L S G + ++ S A Y KH D +
Sbjct: 106 LSVSDFDNAKGLNVKHYK-----IRKLDSGGFYITSRTQFSSLQQLVAYYSKHADGL-CH 159
Query: 123 EEHGAKPSTAPMHVQNAREVPEYEIDPKELDFSNSVEITKGTFR---IASWRGT-QVAVK 178
P++ P A++ +EI P+E V++ +G F + +W GT +VA+K
Sbjct: 160 RLTNVCPTSKPQTQGLAKDA--WEI-PRE-SLRLEVKLGQGCFGEVWMGTWNGTTRVAIK 215
Query: 179 TLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYL 238
TL + E AF+ E +++K+RH +VQ L AV P+ IVTEY+ KG L +L
Sbjct: 216 TLKPGNMSPE----AFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFL 270
Query: 239 KQKGA--LKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGL 296
K + L+ V A IA GM Y+ +HRDL +NIL ++ KVADFGL
Sbjct: 271 KGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGL 327
Query: 297 SKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQEM-IEGC 352
+L+ ED T + + ++ APE + K DV+SF ++L E+ +G
Sbjct: 328 GRLI-------EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 380
Query: 353 PPFPTKQEKEVPKAYIANERPPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
P+P +EV R P P + L +L+ CW ++P RPTF +
Sbjct: 381 VPYPGMVNREVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKDPEERPTFEYLQAF 435
Query: 411 LDD 413
L+D
Sbjct: 436 LED 438
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 29/262 (11%)
Query: 171 RGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYL 229
R T+VAVK L + E + I E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 59 RVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 230 PKGDLRAYLKQK----------------GALKPTLAVKFALDIARGMNYLHENRPEAIIH 273
KG+LR YL+ + L V A +ARGM YL + IH
Sbjct: 117 SKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 173
Query: 274 RDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
RDL N+L + +K+ADFGL++ + + K+ T ++ APE + Y
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK---TTNGRLPVKWMAPEALFDRIYT 230
Query: 334 TKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIED 392
+ DV+SF ++L E+ G P+P +E+ K R + T+ Y ++ D
Sbjct: 231 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY---MMMRD 287
Query: 393 CWSEEPFRRPTFRQILMRLDDI 414
CW P +RPTF+Q++ LD I
Sbjct: 288 CWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 29/262 (11%)
Query: 171 RGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYL 229
R T+VAVK L + E + I E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 44 RVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 101
Query: 230 PKGDLRAYLKQK----------------GALKPTLAVKFALDIARGMNYLHENRPEAIIH 273
KG+LR YL+ + L V A +ARGM YL + IH
Sbjct: 102 SKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 158
Query: 274 RDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
RDL N+L + +K+ADFGL++ + + K+ T ++ APE + Y
Sbjct: 159 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK---TTNGRLPVKWMAPEALFDRIYT 215
Query: 334 TKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIED 392
+ DV+SF ++L E+ G P+P +E+ K R + T+ Y ++ D
Sbjct: 216 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY---MMMRD 272
Query: 393 CWSEEPFRRPTFRQILMRLDDI 414
CW P +RPTF+Q++ LD I
Sbjct: 273 CWHAVPSQRPTFKQLVEDLDRI 294
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 133/266 (50%), Gaps = 28/266 (10%)
Query: 158 VEITKGTFR---IASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
V++ +G F + +W GT +VA+KTL + E AF+ E +++K+RH +VQ L
Sbjct: 17 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 71
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGA--LKPTLAVKFALDIARGMNYLHENRPEAI 271
AV P+ IVTEY+ KG L +LK + L+ V A IA GM Y+
Sbjct: 72 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---Y 128
Query: 272 IHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYK 328
+HRDL +NIL ++ KVADFGL++L+ ED T + + ++ APE
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKFPIKWTAPEAAL 181
Query: 329 NEEYDTKVDVFSFALILQEM-IEGCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLR 387
+ K DV+SF ++L E+ +G P+P +EV R P L
Sbjct: 182 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE---SLH 238
Query: 388 ELIEDCWSEEPFRRPTFRQILMRLDD 413
+L+ CW +EP RPTF + L+D
Sbjct: 239 DLMCQCWRKEPEERPTFEYLQAFLED 264
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 32/271 (11%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 232 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHR+L
Sbjct: 285 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRNL 341
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 342 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-------KWTAPESLAYNKFS 394
Query: 334 TKVDVFSFALILQEMIE-GCPPFPT---KQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 395 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 448
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDISDQLSI 420
+ CW P RP+F +I + + + SI
Sbjct: 449 MRACWQWNPSDRPSFAEIHQAFETMFQESSI 479
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 133/266 (50%), Gaps = 28/266 (10%)
Query: 158 VEITKGTFR---IASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
V++ +G F + +W GT +VA+KTL + E AF+ E +++K+RH +VQ L
Sbjct: 14 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 68
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGA--LKPTLAVKFALDIARGMNYLHENRPEAI 271
AV P+ IVTEY+ KG L +LK + L+ V A IA GM Y+
Sbjct: 69 YAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---Y 125
Query: 272 IHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYK 328
+HRDL +NIL ++ KVADFGL++L+ ED T + + ++ APE
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLI-------EDNEXTARQGAKFPIKWTAPEAAL 178
Query: 329 NEEYDTKVDVFSFALILQEM-IEGCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLR 387
+ K DV+SF ++L E+ +G P+P +EV R P L
Sbjct: 179 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE---SLH 235
Query: 388 ELIEDCWSEEPFRRPTFRQILMRLDD 413
+L+ CW +EP RPTF + L+D
Sbjct: 236 DLMCQCWRKEPEERPTFEYLQAFLED 261
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 32/271 (11%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 235 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHR+L
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNL 344
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 345 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-------KWTAPESLAYNKFS 397
Query: 334 TKVDVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 398 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 451
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDISDQLSI 420
+ CW P RP+F +I + + + SI
Sbjct: 452 MRACWQWNPSDRPSFAEIHQAFETMFQESSI 482
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 29/262 (11%)
Query: 171 RGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYL 229
R T+VAVK L + E + I E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 100 RVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 157
Query: 230 PKGDLRAYLKQK----------------GALKPTLAVKFALDIARGMNYLHENRPEAIIH 273
KG+LR YL+ + L V A +ARGM YL + IH
Sbjct: 158 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 214
Query: 274 RDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
RDL N+L + +K+ADFGL++ + + K+ T ++ APE + Y
Sbjct: 215 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK---TTNGRLPVKWMAPEALFDRIYT 271
Query: 334 TKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIED 392
+ DV+SF ++L E+ G P+P +E+ K R + T+ Y ++ D
Sbjct: 272 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY---MMMRD 328
Query: 393 CWSEEPFRRPTFRQILMRLDDI 414
CW P +RPTF+Q++ LD I
Sbjct: 329 CWHAVPSQRPTFKQLVEDLDRI 350
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 130/258 (50%), Gaps = 32/258 (12%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 28 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 137
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-------KWTAPESLAYNKFS 190
Query: 334 TKVDVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 244
Query: 390 IEDCWSEEPFRRPTFRQI 407
+ CW P RP+F +I
Sbjct: 245 MRACWQWNPSDRPSFAEI 262
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 32/271 (11%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 274 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHR+L
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRNL 383
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 384 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-------KWTAPESLAYNKFS 436
Query: 334 TKVDVFSFALILQEMIE-GCPPFPT---KQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 437 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 490
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDISDQLSI 420
+ CW P RP+F +I + + + SI
Sbjct: 491 MRACWQWNPSDRPSFAEIHQAFETMFQESSI 521
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 130/258 (50%), Gaps = 32/258 (12%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 33 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 142
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-------KWTAPESLAYNKFS 195
Query: 334 TKVDVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 249
Query: 390 IEDCWSEEPFRRPTFRQI 407
+ CW P RP+F +I
Sbjct: 250 MRACWQWNPSDRPSFAEI 267
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 135/268 (50%), Gaps = 32/268 (11%)
Query: 158 VEITKGTFR---IASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
V++ +G F + +W GT +VA+KTL + E AF+ E +++KIRH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKIRHEKLVQ-L 78
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGA--LKPTLAVKFALDIARGMNYLHENRPEAI 271
AV P+ IVTEY+ KG L +LK + L+ V A IA GM Y+
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 272 IHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYK 328
+HRDL +NIL ++ KVADFGL++L+ ED T + + ++ APE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKFPIKWTAPEAAL 188
Query: 329 NEEYDTKVDVFSFALILQEM-IEGCPPFPTKQEKEVPKAYIANERPPF--RAPTTHYAYG 385
+ K DV+SF ++L E+ +G P+P +EV R P P +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES----- 243
Query: 386 LRELIEDCWSEEPFRRPTFRQILMRLDD 413
L +L+ CW ++P RPTF + L+D
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 130/258 (50%), Gaps = 32/258 (12%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 32 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 141
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 142 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-------KWTAPESLAYNKFS 194
Query: 334 TKVDVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 195 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 248
Query: 390 IEDCWSEEPFRRPTFRQI 407
+ CW P RP+F +I
Sbjct: 249 MRACWQWNPSDRPSFAEI 266
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 130/258 (50%), Gaps = 32/258 (12%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 28 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 137
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-------KWTAPESLAYNKFS 190
Query: 334 TKVDVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 244
Query: 390 IEDCWSEEPFRRPTFRQI 407
+ CW P RP+F +I
Sbjct: 245 MRACWQWNPSDRPSFAEI 262
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 134/271 (49%), Gaps = 32/271 (11%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 26 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 135
Query: 277 EPSNILRDDSGHLKVADFGLSKLLKFANTVKE---DRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ P+ ++ APE ++
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-------KWTAPESLAYNKFS 188
Query: 334 TKVDVFSFALILQEMIE-GCPPFPT---KQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPE-GCPEKVY-----EL 242
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDISDQLSI 420
+ CW P RP+F +I + + + SI
Sbjct: 243 MRACWQWNPSDRPSFAEIHQAFETMFQESSI 273
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 134/271 (49%), Gaps = 32/271 (11%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 28 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+ E++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 137
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-------KWTAPESLAYNKFS 190
Query: 334 TKVDVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 244
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDISDQLSI 420
+ CW P RP+F +I + + + SI
Sbjct: 245 MRACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 134/271 (49%), Gaps = 32/271 (11%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 28 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+ E++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 137
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-------KWTAPESLAYNKFS 190
Query: 334 TKVDVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 244
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDISDQLSI 420
+ CW P RP+F +I + + + SI
Sbjct: 245 MRACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 137/283 (48%), Gaps = 28/283 (9%)
Query: 139 AREVPEYEID-PKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDE 197
A E+P I K+L E+ G + T+VAVKTL + V+AF++E
Sbjct: 6 AWEIPRESIKLVKKLGAGQFGEVWMGYYN----NSTKVAVKTLKPGTMS----VQAFLEE 57
Query: 198 LALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALD 255
L++ ++H +V+ VT+ P+ I+TE++ KG L +LK K L + F+
Sbjct: 58 ANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ 117
Query: 256 IARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCE 315
IA GM Y+ IHRDL +N+L +S K+ADFGL++++ ED T
Sbjct: 118 IAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVI-------EDNEYTAR 167
Query: 316 ETS---WRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANE 371
E + ++ APE + K +V+SF ++L E++ G P+P + +V A
Sbjct: 168 EGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGY 227
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
R P Y ++++ CW E+ RPTF + LDD
Sbjct: 228 RMPRMENCPDELY---DIMKMCWKEKAEERPTFDYLQSVLDDF 267
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 133/266 (50%), Gaps = 28/266 (10%)
Query: 158 VEITKGTFR---IASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
V++ +G F + +W GT +VA+KTL + E AF+ E +++K+RH +VQ L
Sbjct: 21 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 75
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGA--LKPTLAVKFALDIARGMNYLHENRPEAI 271
AV P+ IVTEY+ KG L +LK + L+ V + IA GM Y+
Sbjct: 76 YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---Y 132
Query: 272 IHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYK 328
+HRDL +NIL ++ KVADFGL++L+ ED T + + ++ APE
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKFPIKWTAPEAAL 185
Query: 329 NEEYDTKVDVFSFALILQEM-IEGCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLR 387
+ K DV+SF ++L E+ +G P+P +EV R P L
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE---SLH 242
Query: 388 ELIEDCWSEEPFRRPTFRQILMRLDD 413
+L+ CW +EP RPTF + L+D
Sbjct: 243 DLMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 135/268 (50%), Gaps = 32/268 (11%)
Query: 158 VEITKGTFR---IASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
V++ +G F + +W GT +VA+KTL + E AF+ E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGA--LKPTLAVKFALDIARGMNYLHENRPEAI 271
AV P+ IVTEY+ KG L +LK + L+ V A IA GM Y+
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 272 IHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYK 328
+HRDL +NIL ++ KVADFGL++L+ ED T + + ++ APE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKFPIKWTAPEAAL 188
Query: 329 NEEYDTKVDVFSFALILQEM-IEGCPPFPTKQEKEVPKAYIANERPPF--RAPTTHYAYG 385
+ K DV+SF ++L E+ +G P+P +EV R P P +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES----- 243
Query: 386 LRELIEDCWSEEPFRRPTFRQILMRLDD 413
L +L+ CW ++P RPTF + L+D
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 135/268 (50%), Gaps = 32/268 (11%)
Query: 158 VEITKGTFR---IASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
V++ +G F + +W GT +VA+KTL + E AF+ E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGA--LKPTLAVKFALDIARGMNYLHENRPEAI 271
AV P+ IVTEY+ KG L +LK + L+ V A IA GM Y+
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 272 IHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYK 328
+HRDL +NIL ++ KVADFGL++L+ ED T + + ++ APE
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKFPIKWTAPEAAL 188
Query: 329 NEEYDTKVDVFSFALILQEM-IEGCPPFPTKQEKEVPKAYIANERPPF--RAPTTHYAYG 385
+ K DV+SF ++L E+ +G P+P +EV R P P +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES----- 243
Query: 386 LRELIEDCWSEEPFRRPTFRQILMRLDD 413
L +L+ CW ++P RPTF + L+D
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 133/266 (50%), Gaps = 28/266 (10%)
Query: 158 VEITKGTFR---IASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
V++ +G F + +W GT +VA+KTL + E AF+ E +++K+RH +VQ L
Sbjct: 15 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 69
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGA--LKPTLAVKFALDIARGMNYLHENRPEAI 271
AV P+ IVTEY+ KG L +LK + L+ V A IA GM Y+
Sbjct: 70 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 126
Query: 272 IHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYK 328
+HRDL +NIL ++ KVADFGL++L+ ED T + + ++ APE
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKFPIKWTAPEAAL 179
Query: 329 NEEYDTKVDVFSFALILQEM-IEGCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLR 387
+ K DV+SF ++L E+ +G P+P +EV R P L
Sbjct: 180 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE---SLH 236
Query: 388 ELIEDCWSEEPFRRPTFRQILMRLDD 413
+L+ CW ++P RPTF + L+D
Sbjct: 237 DLMCQCWRKDPEERPTFEYLQAFLED 262
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 28/316 (8%)
Query: 119 IKLLEEH---GAKPSTAPMHVQNAREVPEYEIDPKELDFSNSVEITKGTF-RIASWR--- 171
I LL +H +P T V R VP+ + D +I +G F + S R
Sbjct: 78 IPLLIDHLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRA 137
Query: 172 -GTQVAVKTLGEEVFTDEDKVKA-FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYL 229
T VAVK+ E + D +KA F+ E +L++ HPN+V+ +G TQ P+ IV E +
Sbjct: 138 DNTLVAVKSCRETLPPD---LKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV 194
Query: 230 PKGDLRAYLKQKGA-LKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
GD +L+ +GA L+ ++ D A GM YL + IHRDL N L +
Sbjct: 195 QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNV 251
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEM 348
LK++DFG+S+ + A+ V + ++ APE Y ++ DV+SF ++L E
Sbjct: 252 LKISDFGMSR--EEADGVXAASG-GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWET 308
Query: 349 IE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
G P+P ++ + R P + L+E CW+ EP +RP+F I
Sbjct: 309 FSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVF---RLMEQCWAYEPGQRPSFSTI 365
Query: 408 LMRLDDISDQLSIKRH 423
L I KRH
Sbjct: 366 YQELQSIR-----KRH 376
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 131/260 (50%), Gaps = 33/260 (12%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
VAVK L ++ T+ED + + E+ +++ I +H N++ LGA TQ P+ ++ EY KG+
Sbjct: 70 VAVKMLKDDA-TEED-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 127
Query: 234 LRAYLK------------------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
LR YL+ ++ K ++ + L ARGM YL + IHRD
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL--ARGMEYLASQK---CIHRD 182
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N+L ++ +K+ADFGL++ + N + + T ++ APE + Y +
Sbjct: 183 LAARNVLVTENNVMKIADFGLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 239
Query: 336 VDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCW 394
DV+SF +++ E+ G P+P +E+ K R A T+ Y ++ DCW
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY---MMMRDCW 296
Query: 395 SEEPFRRPTFRQILMRLDDI 414
P +RPTF+Q++ LD I
Sbjct: 297 HAVPSQRPTFKQLVEDLDRI 316
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 133/266 (50%), Gaps = 28/266 (10%)
Query: 158 VEITKGTFR---IASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
V++ +G F + +W GT +VA+KTL + E AF+ E +++K+RH +VQ L
Sbjct: 21 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 75
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGA--LKPTLAVKFALDIARGMNYLHENRPEAI 271
AV P+ IVTEY+ KG L +LK + L+ V + IA GM Y+
Sbjct: 76 YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---Y 132
Query: 272 IHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYK 328
+HRDL +NIL ++ KVADFGL++L+ ED T + + ++ APE
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI-------EDNEWTARQGAKFPIKWTAPEAAL 185
Query: 329 NEEYDTKVDVFSFALILQEM-IEGCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLR 387
+ K DV+SF ++L E+ +G P+P +EV R P L
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE---SLH 242
Query: 388 ELIEDCWSEEPFRRPTFRQILMRLDD 413
+L+ CW +EP RPTF + L+D
Sbjct: 243 DLMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 133/266 (50%), Gaps = 28/266 (10%)
Query: 158 VEITKGTFR---IASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
V++ +G F + +W GT +VA+KTL + E AF+ E +++K+RH +VQ L
Sbjct: 13 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 67
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGA--LKPTLAVKFALDIARGMNYLHENRPEAI 271
AV P+ IVTEY+ KG L +LK + L+ V A IA GM Y+
Sbjct: 68 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 124
Query: 272 IHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYK 328
+HRDL +NIL ++ KVADFGL++L+ ED T + + ++ APE
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKFPIKWTAPEAAL 177
Query: 329 NEEYDTKVDVFSFALILQEM-IEGCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLR 387
+ K DV+SF ++L E+ +G P+P +EV R P L
Sbjct: 178 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE---SLH 234
Query: 388 ELIEDCWSEEPFRRPTFRQILMRLDD 413
+L+ CW ++P RPTF + L+D
Sbjct: 235 DLMCQCWRKDPEERPTFEYLQAFLED 260
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 129/255 (50%), Gaps = 26/255 (10%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 33 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+TE++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 142
Query: 277 EPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKV 336
N L ++ +KVADFGLS+L+ T + ++ APE ++ K
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLM----TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 337 DVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIED 392
DV++F ++L E+ G P+P Q E+ + ERP P Y EL+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----ELMRA 252
Query: 393 CWSEEPFRRPTFRQI 407
CW P RP+F +I
Sbjct: 253 CWQWNPSDRPSFAEI 267
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 128/260 (49%), Gaps = 33/260 (12%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
VAVK L ++ E + + E+ +++ I +H N++ LGA TQ P+ ++ EY KG+
Sbjct: 70 VAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 127
Query: 234 LRAYLK------------------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
LR YL+ ++ K ++ + L ARGM YL + IHRD
Sbjct: 128 LREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQL--ARGMEYLASQK---CIHRD 182
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N+L ++ +K+ADFGL++ + N + + T ++ APE + Y +
Sbjct: 183 LAARNVLVTENNVMKIADFGLARDI---NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQ 239
Query: 336 VDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCW 394
DV+SF +++ E+ G P+P +E+ K R A T+ Y ++ DCW
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY---MMMRDCW 296
Query: 395 SEEPFRRPTFRQILMRLDDI 414
P +RPTF+Q++ LD I
Sbjct: 297 HAVPSQRPTFKQLVEDLDRI 316
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 28/316 (8%)
Query: 119 IKLLEEH---GAKPSTAPMHVQNAREVPEYEIDPKELDFSNSVEITKGTF-RIASWR--- 171
I LL +H +P T V R VP+ + D +I +G F + S R
Sbjct: 78 IPLLIDHLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRA 137
Query: 172 -GTQVAVKTLGEEVFTDEDKVKA-FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYL 229
T VAVK+ E + D +KA F+ E +L++ HPN+V+ +G TQ P+ IV E +
Sbjct: 138 DNTLVAVKSCRETLPPD---LKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV 194
Query: 230 PKGDLRAYLKQKGA-LKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
GD +L+ +GA L+ ++ D A GM YL + IHRDL N L +
Sbjct: 195 QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNV 251
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEM 348
LK++DFG+S+ + A+ V + ++ APE Y ++ DV+SF ++L E
Sbjct: 252 LKISDFGMSR--EEADGVYAASG-GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWET 308
Query: 349 IE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
G P+P ++ + R P + L+E CW+ EP +RP+F I
Sbjct: 309 FSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVF---RLMEQCWAYEPGQRPSFSTI 365
Query: 408 LMRLDDISDQLSIKRH 423
L I KRH
Sbjct: 366 YQELQSIR-----KRH 376
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 128/260 (49%), Gaps = 33/260 (12%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
VAVK L ++ E + + E+ +++ I +H N++ LGA TQ P+ ++ EY KG+
Sbjct: 70 VAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 127
Query: 234 LRAYLK------------------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
LR YL+ ++ K ++ + L ARGM YL + IHRD
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL--ARGMEYLASQK---CIHRD 182
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N+L ++ +K+ADFGL++ + N + + T ++ APE + Y +
Sbjct: 183 LAARNVLVTENNVMKIADFGLARDI---NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQ 239
Query: 336 VDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCW 394
DV+SF +++ E+ G P+P +E+ K R A T+ Y ++ DCW
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY---MMMRDCW 296
Query: 395 SEEPFRRPTFRQILMRLDDI 414
P +RPTF+Q++ LD I
Sbjct: 297 HAVPSQRPTFKQLVEDLDRI 316
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 32/258 (12%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 33 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+ E++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 142
Query: 277 EPSNILRDDSGHLKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ + P+ ++ APE ++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-------KWTAPESLAYNKFS 195
Query: 334 TKVDVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----EL 249
Query: 390 IEDCWSEEPFRRPTFRQI 407
+ CW P RP+F +I
Sbjct: 250 MRACWQWNPSDRPSFAEI 267
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 135/268 (50%), Gaps = 32/268 (11%)
Query: 158 VEITKGTFR---IASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
V++ +G F + +W GT +VA+KTL + E AF+ E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGA--LKPTLAVKFALDIARGMNYLHENRPEAI 271
AV P+ IVTEY+ KG L +LK + L+ V A IA GM Y+
Sbjct: 79 YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 272 IHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYK 328
+HRDL +NIL ++ KVADFGL++L+ ED T + + ++ APE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKFPIKWTAPEAAL 188
Query: 329 NEEYDTKVDVFSFALILQEM-IEGCPPFPTKQEKEVPKAYIANERPPF--RAPTTHYAYG 385
+ K DV+SF ++L E+ +G P+P +EV R P P +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES----- 243
Query: 386 LRELIEDCWSEEPFRRPTFRQILMRLDD 413
L +L+ CW ++P RPTF + L+D
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 135/272 (49%), Gaps = 29/272 (10%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
QVAVKTL EV++++D++ F+ E ++ K H N+V+ +G QS P I+ E + GD
Sbjct: 77 QVAVKTL-PEVYSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 134
Query: 234 LRAYLK-------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDS 286
L+++L+ Q +L + A DIA G YL EN IHRD+ N L
Sbjct: 135 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP 191
Query: 287 GHLKVA---DFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
G +VA DFG+++ + A+ ++ C ++ PE + + +K D +SF +
Sbjct: 192 GPGRVAKIGDFGMARDIYRASYYRKG---GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 248
Query: 344 ILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWSEEPFR 400
+L E+ G P+P+K +EV + + R PP P Y ++ CW +P
Sbjct: 249 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPED 303
Query: 401 RPTFRQILMRLDDIS---DQLSIKRHWKVGPL 429
RP F IL R++ + D ++ + GPL
Sbjct: 304 RPNFAIILERIEYCTQDPDVINTALPIEYGPL 335
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 133/267 (49%), Gaps = 26/267 (9%)
Query: 177 VKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRA 236
V + E + DE+ + F+ E+ +++ + HPNV++F+G + + + +TEY+ G LR
Sbjct: 37 VMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRG 96
Query: 237 YLKQKGALKP-TLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFG 295
+K + P + V FA DIA GM YLH IIHRDL N L ++ ++ VADFG
Sbjct: 97 IIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFG 153
Query: 296 LSKLLKFANTVKED-RPVTCEETSWRYA--------APEVYKNEEYDTKVDVFSFALILQ 346
L++L+ T E R + + RY APE+ YD KVDVFSF ++L
Sbjct: 154 LARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLC 213
Query: 347 EMIEGCPPFPTKQEKEVP-----KAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRR 401
E+I P + + + ++ PP P + + +R C +P +R
Sbjct: 214 EIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPP-NCPPSFFPITVR-----CCDLDPEKR 267
Query: 402 PTFRQILMRLDDISDQLSIKRHWKVGP 428
P+F ++ L+ + ++ + H +GP
Sbjct: 268 PSFVKLEHWLETL--RMHLAGHLPLGP 292
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 133/271 (49%), Gaps = 32/271 (11%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 26 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+ E++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 135
Query: 277 EPSNILRDDSGHLKVADFGLSKLLKFANTVKE---DRPVTCEETSWRYAAPEVYKNEEYD 333
N L ++ +KVADFGLS+L+ P+ ++ APE ++
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-------KWTAPESLAYNKFS 188
Query: 334 TKVDVFSFALILQEMIE-GCPPFPT---KQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K DV++F ++L E+ G P+P Q E+ + ERP P Y EL
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPE-GCPEKVY-----EL 242
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDISDQLSI 420
+ CW P RP+F +I + + + SI
Sbjct: 243 MRACWQWNPSDRPSFAEIHQAFETMFQESSI 273
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 129/264 (48%), Gaps = 41/264 (15%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
VAVK L ++ E + + E+ +++ I +H N++ LGA TQ P+ ++ EY KG+
Sbjct: 70 VAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 127
Query: 234 LRAYLK------------------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
LR YL+ ++ K ++ + L ARGM YL + IHRD
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL--ARGMEYLASQK---CIHRD 182
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLK----FANTVKEDRPVTCEETSWRYAAPEVYKNEE 331
L N+L ++ +K+ADFGL++ + + NT PV ++ APE +
Sbjct: 183 LAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPV-------KWMAPEALFDRV 235
Query: 332 YDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELI 390
Y + DV+SF +++ E+ G P+P +E+ K R A T+ Y ++
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY---MMM 292
Query: 391 EDCWSEEPFRRPTFRQILMRLDDI 414
DCW P +RPTF+Q++ LD I
Sbjct: 293 RDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 133/268 (49%), Gaps = 26/268 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G ++ S VAVKTL E D +V+ F+ E A++++I+HPN+VQ LG T+
Sbjct: 29 EVYEGVWKKYS---LTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 219 STPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
P I+ E++ G+L YL++ + + + + A I+ M YL + IHRDL
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 138
Query: 277 EPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKV 336
N L ++ +KVADFGLS+L+ T + ++ APE ++ K
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLM----TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 337 DVFSFALILQEMIE-GCPPFP---TKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIED 392
DV++F ++L E+ G P+P Q E+ + ERP P Y EL+
Sbjct: 195 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVY-----ELMRA 248
Query: 393 CWSEEPFRRPTFRQILMRLDDISDQLSI 420
CW P RP+F +I + + + SI
Sbjct: 249 CWQWNPSDRPSFAEIHQAFETMFQESSI 276
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 127/258 (49%), Gaps = 33/258 (12%)
Query: 170 WRG-----TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMI 224
W G T+VAVK+L + + + AF+ E L+++++H +V+ VTQ P+ I
Sbjct: 25 WMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-PIYI 79
Query: 225 VTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+TEY+ G L +LK +K T+ + A IA GM ++ E IHRDL +NIL
Sbjct: 80 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANIL 136
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKVDVF 339
D+ K+ADFGL++L+ ED T E + ++ APE + K DV+
Sbjct: 137 VSDTLSCKIADFGLARLI-------EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 189
Query: 340 SFALILQEMI-EGCPPFPTKQEKEVPKAYIANERP--PFRAPTTHYAYGLRELIEDCWSE 396
SF ++L E++ G P+P EV + R P P Y +L+ CW E
Sbjct: 190 SFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKE 244
Query: 397 EPFRRPTFRQILMRLDDI 414
P RPTF + L+D
Sbjct: 245 RPEDRPTFDYLRSVLEDF 262
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 125/250 (50%), Gaps = 28/250 (11%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVK+L + + + AF+ E L+++++H +V+ VTQ P+ I+TEY+ G
Sbjct: 38 TKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENG 92
Query: 233 DLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
L +LK +K T+ + A IA GM ++ E IHRDL +NIL D+ K
Sbjct: 93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCK 149
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQE 347
+ADFGL++L+ ED T E + ++ APE + K DV+SF ++L E
Sbjct: 150 IADFGLARLI-------EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 348 MI-EGCPPFPTKQEKEVPKAYIANERP--PFRAPTTHYAYGLRELIEDCWSEEPFRRPTF 404
++ G P+P EV + R P P Y +L+ CW E P RPTF
Sbjct: 203 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKERPEDRPTF 257
Query: 405 RQILMRLDDI 414
+ L+D
Sbjct: 258 DYLRSVLEDF 267
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 128/260 (49%), Gaps = 33/260 (12%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
VAVK L ++ E + + E+ +++ I +H N++ LGA TQ P+ ++ EY KG+
Sbjct: 70 VAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGN 127
Query: 234 LRAYLK------------------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
LR YL+ ++ K ++ + L ARGM YL + IHRD
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL--ARGMEYLASQK---CIHRD 182
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N+L ++ +K+ADFGL++ + N + + T ++ APE + Y +
Sbjct: 183 LAARNVLVTENNVMKIADFGLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 239
Query: 336 VDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCW 394
DV+SF +++ E+ G P+P +E+ K R A T+ Y ++ DCW
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY---MMMRDCW 296
Query: 395 SEEPFRRPTFRQILMRLDDI 414
P +RPTF+Q++ LD I
Sbjct: 297 HAVPSQRPTFKQLVEDLDRI 316
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 128/260 (49%), Gaps = 33/260 (12%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
VAVK L ++ E + + E+ +++ I +H N++ LGA TQ P+ ++ EY KG+
Sbjct: 59 VAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 116
Query: 234 LRAYLK------------------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
LR YL+ ++ K ++ + L ARGM YL + IHRD
Sbjct: 117 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL--ARGMEYLASQK---CIHRD 171
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N+L ++ +K+ADFGL++ + N + + T ++ APE + Y +
Sbjct: 172 LAARNVLVTENNVMKIADFGLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 228
Query: 336 VDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCW 394
DV+SF +++ E+ G P+P +E+ K R A T+ Y ++ DCW
Sbjct: 229 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY---MMMRDCW 285
Query: 395 SEEPFRRPTFRQILMRLDDI 414
P +RPTF+Q++ LD I
Sbjct: 286 HAVPSQRPTFKQLVEDLDRI 305
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 125/250 (50%), Gaps = 28/250 (11%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVK+L + + + AF+ E L+++++H +V+ VTQ P+ I+TEY+ G
Sbjct: 38 TKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENG 92
Query: 233 DLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
L +LK +K T+ + A IA GM ++ E IHRDL +NIL D+ K
Sbjct: 93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCK 149
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQE 347
+ADFGL++L+ ED T E + ++ APE + K DV+SF ++L E
Sbjct: 150 IADFGLARLI-------EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 348 MI-EGCPPFPTKQEKEVPKAYIANERP--PFRAPTTHYAYGLRELIEDCWSEEPFRRPTF 404
++ G P+P EV + R P P Y +L+ CW E P RPTF
Sbjct: 203 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKERPEDRPTF 257
Query: 405 RQILMRLDDI 414
+ L+D
Sbjct: 258 DYLRSVLEDF 267
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 128/260 (49%), Gaps = 33/260 (12%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
VAVK L ++ E + + E+ +++ I +H N++ LGA TQ P+ ++ EY KG+
Sbjct: 57 VAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 114
Query: 234 LRAYLK------------------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
LR YL+ ++ K ++ + L ARGM YL + IHRD
Sbjct: 115 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL--ARGMEYLASQK---CIHRD 169
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N+L ++ +K+ADFGL++ + N + + T ++ APE + Y +
Sbjct: 170 LTARNVLVTENNVMKIADFGLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 226
Query: 336 VDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCW 394
DV+SF +++ E+ G P+P +E+ K R A T+ Y ++ DCW
Sbjct: 227 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY---MMMRDCW 283
Query: 395 SEEPFRRPTFRQILMRLDDI 414
P +RPTF+Q++ LD I
Sbjct: 284 HAVPSQRPTFKQLVEDLDRI 303
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 128/260 (49%), Gaps = 33/260 (12%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
VAVK L ++ E + + E+ +++ I +H N++ LGA TQ P+ ++ EY KG+
Sbjct: 62 VAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 119
Query: 234 LRAYLK------------------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
LR YL+ ++ K ++ + L ARGM YL + IHRD
Sbjct: 120 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL--ARGMEYLASQK---CIHRD 174
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N+L ++ +K+ADFGL++ + N + + T ++ APE + Y +
Sbjct: 175 LAARNVLVTENNVMKIADFGLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 231
Query: 336 VDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCW 394
DV+SF +++ E+ G P+P +E+ K R A T+ Y ++ DCW
Sbjct: 232 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY---MMMRDCW 288
Query: 395 SEEPFRRPTFRQILMRLDDI 414
P +RPTF+Q++ LD I
Sbjct: 289 HAVPSQRPTFKQLVEDLDRI 308
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 125/250 (50%), Gaps = 28/250 (11%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVK+L + + + AF+ E L+++++H +V+ VTQ P+ I+TEY+ G
Sbjct: 39 TKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENG 93
Query: 233 DLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
L +LK +K T+ + A IA GM ++ E IHRDL +NIL D+ K
Sbjct: 94 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCK 150
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQE 347
+ADFGL++L+ ED T E + ++ APE + K DV+SF ++L E
Sbjct: 151 IADFGLARLI-------EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 203
Query: 348 MI-EGCPPFPTKQEKEVPKAYIANERP--PFRAPTTHYAYGLRELIEDCWSEEPFRRPTF 404
++ G P+P EV + R P P Y +L+ CW E P RPTF
Sbjct: 204 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKERPEDRPTF 258
Query: 405 RQILMRLDDI 414
+ L+D
Sbjct: 259 DYLRSVLEDF 268
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 134/268 (50%), Gaps = 32/268 (11%)
Query: 158 VEITKGTFR---IASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
V++ +G F + +W GT +VA+KTL + E AF+ E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGA--LKPTLAVKFALDIARGMNYLHENRPEAI 271
AV P+ IV EY+ KG L +LK + L+ V A IA GM Y+
Sbjct: 79 YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 272 IHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYK 328
+HRDL +NIL ++ KVADFGL++L+ ED T + + ++ APE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKFPIKWTAPEAAL 188
Query: 329 NEEYDTKVDVFSFALILQEM-IEGCPPFPTKQEKEVPKAYIANERPPF--RAPTTHYAYG 385
+ K DV+SF ++L E+ +G P+P +EV R P P +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES----- 243
Query: 386 LRELIEDCWSEEPFRRPTFRQILMRLDD 413
L +L+ CW ++P RPTF + L+D
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 125/250 (50%), Gaps = 28/250 (11%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVK+L + + + AF+ E L+++++H +V+ VTQ P+ I+TEY+ G
Sbjct: 40 TKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENG 94
Query: 233 DLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
L +LK +K T+ + A IA GM ++ E IHRDL +NIL D+ K
Sbjct: 95 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCK 151
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQE 347
+ADFGL++L+ ED T E + ++ APE + K DV+SF ++L E
Sbjct: 152 IADFGLARLI-------EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 204
Query: 348 MI-EGCPPFPTKQEKEVPKAYIANERP--PFRAPTTHYAYGLRELIEDCWSEEPFRRPTF 404
++ G P+P EV + R P P Y +L+ CW E P RPTF
Sbjct: 205 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKERPEDRPTF 259
Query: 405 RQILMRLDDI 414
+ L+D
Sbjct: 260 DYLRSVLEDF 269
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 135/272 (49%), Gaps = 29/272 (10%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
QVAVKTL EV +++D++ F+ E ++ K+ H N+V+ +G QS P I+ E + GD
Sbjct: 63 QVAVKTL-PEVCSEQDELD-FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 234 LRAYLK-------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDS 286
L+++L+ Q +L + A DIA G YL EN IHRD+ N L
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP 177
Query: 287 GHLKVA---DFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
G +VA DFG+++ + A+ ++ C ++ PE + + +K D +SF +
Sbjct: 178 GPGRVAKIGDFGMARDIYRASYYRKG---GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 234
Query: 344 ILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWSEEPFR 400
+L E+ G P+P+K +EV + + R PP P Y ++ CW +P
Sbjct: 235 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPED 289
Query: 401 RPTFRQILMRLDDIS---DQLSIKRHWKVGPL 429
RP F IL R++ + D ++ + GPL
Sbjct: 290 RPNFAIILERIEYCTQDPDVINTALPIEYGPL 321
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 125/250 (50%), Gaps = 28/250 (11%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVK+L + + + AF+ E L+++++H +V+ VTQ P+ I+TEY+ G
Sbjct: 44 TKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENG 98
Query: 233 DLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
L +LK +K T+ + A IA GM ++ E IHRDL +NIL D+ K
Sbjct: 99 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCK 155
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQE 347
+ADFGL++L+ ED T E + ++ APE + K DV+SF ++L E
Sbjct: 156 IADFGLARLI-------EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 208
Query: 348 MI-EGCPPFPTKQEKEVPKAYIANERP--PFRAPTTHYAYGLRELIEDCWSEEPFRRPTF 404
++ G P+P EV + R P P Y +L+ CW E P RPTF
Sbjct: 209 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKERPEDRPTF 263
Query: 405 RQILMRLDDI 414
+ L+D
Sbjct: 264 DYLRSVLEDF 273
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 125/250 (50%), Gaps = 28/250 (11%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVK+L + + + AF+ E L+++++H +V+ VTQ P+ I+TEY+ G
Sbjct: 48 TKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENG 102
Query: 233 DLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
L +LK +K T+ + A IA GM ++ E IHRDL +NIL D+ K
Sbjct: 103 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCK 159
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQE 347
+ADFGL++L+ ED T E + ++ APE + K DV+SF ++L E
Sbjct: 160 IADFGLARLI-------EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 212
Query: 348 MI-EGCPPFPTKQEKEVPKAYIANERP--PFRAPTTHYAYGLRELIEDCWSEEPFRRPTF 404
++ G P+P EV + R P P Y +L+ CW E P RPTF
Sbjct: 213 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKERPEDRPTF 267
Query: 405 RQILMRLDDI 414
+ L+D
Sbjct: 268 DYLRSVLEDF 277
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 134/268 (50%), Gaps = 32/268 (11%)
Query: 158 VEITKGTFR---IASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
V++ +G F + +W GT +VA+KTL + E AF+ E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGA--LKPTLAVKFALDIARGMNYLHENRPEAI 271
AV P+ IV EY+ KG L +LK + L+ V A IA GM Y+
Sbjct: 79 YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 272 IHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYK 328
+HRDL +NIL ++ KVADFGL++L+ ED T + + ++ APE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKFPIKWTAPEAAL 188
Query: 329 NEEYDTKVDVFSFALILQEM-IEGCPPFPTKQEKEVPKAYIANERPPF--RAPTTHYAYG 385
+ K DV+SF ++L E+ +G P+P +EV R P P +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES----- 243
Query: 386 LRELIEDCWSEEPFRRPTFRQILMRLDD 413
L +L+ CW ++P RPTF + L+D
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 134/268 (50%), Gaps = 32/268 (11%)
Query: 158 VEITKGTFR---IASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
V++ +G F + +W GT +VA+KTL + E AF+ E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGA--LKPTLAVKFALDIARGMNYLHENRPEAI 271
AV P+ IV EY+ KG L +LK + L+ V A IA GM Y+
Sbjct: 79 YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 272 IHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYK 328
+HRDL +NIL ++ KVADFGL++L+ ED T + + ++ APE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI-------EDNEXTARQGAKFPIKWTAPEAAL 188
Query: 329 NEEYDTKVDVFSFALILQEM-IEGCPPFPTKQEKEVPKAYIANERPPF--RAPTTHYAYG 385
+ K DV+SF ++L E+ +G P+P +EV R P P +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES----- 243
Query: 386 LRELIEDCWSEEPFRRPTFRQILMRLDD 413
L +L+ CW ++P RPTF + L+D
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 125/250 (50%), Gaps = 28/250 (11%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVK+L + + + AF+ E L+++++H +V+ VTQ P+ I+TEY+ G
Sbjct: 43 TKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENG 97
Query: 233 DLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
L +LK +K T+ + A IA GM ++ E IHRDL +NIL D+ K
Sbjct: 98 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCK 154
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQE 347
+ADFGL++L+ ED T E + ++ APE + K DV+SF ++L E
Sbjct: 155 IADFGLARLI-------EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 207
Query: 348 MI-EGCPPFPTKQEKEVPKAYIANERP--PFRAPTTHYAYGLRELIEDCWSEEPFRRPTF 404
++ G P+P EV + R P P Y +L+ CW E P RPTF
Sbjct: 208 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKERPEDRPTF 262
Query: 405 RQILMRLDDI 414
+ L+D
Sbjct: 263 DYLRSVLEDF 272
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 125/250 (50%), Gaps = 28/250 (11%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVK+L + + + AF+ E L+++++H +V+ VTQ P+ I+TEY+ G
Sbjct: 38 TKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENG 92
Query: 233 DLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
L +LK +K T+ + A IA GM ++ E IHRDL +NIL D+ K
Sbjct: 93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCK 149
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQE 347
+ADFGL++L+ ED T E + ++ APE + K DV+SF ++L E
Sbjct: 150 IADFGLARLI-------EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 348 MI-EGCPPFPTKQEKEVPKAYIANERP--PFRAPTTHYAYGLRELIEDCWSEEPFRRPTF 404
++ G P+P EV + R P P Y +L+ CW E P RPTF
Sbjct: 203 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKERPEDRPTF 257
Query: 405 RQILMRLDDI 414
+ L+D
Sbjct: 258 DYLRSVLEDF 267
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 135/272 (49%), Gaps = 29/272 (10%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
QVAVKTL EV +++D++ F+ E ++ K+ H N+V+ +G QS P I+ E + GD
Sbjct: 77 QVAVKTL-PEVCSEQDELD-FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGD 134
Query: 234 LRAYLK-------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDS 286
L+++L+ Q +L + A DIA G YL EN IHRD+ N L
Sbjct: 135 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP 191
Query: 287 GHLKVA---DFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
G +VA DFG+++ + A+ ++ C ++ PE + + +K D +SF +
Sbjct: 192 GPGRVAKIGDFGMARDIYRASYYRKG---GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 248
Query: 344 ILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWSEEPFR 400
+L E+ G P+P+K +EV + + R PP P Y ++ CW +P
Sbjct: 249 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPED 303
Query: 401 RPTFRQILMRLDDIS---DQLSIKRHWKVGPL 429
RP F IL R++ + D ++ + GPL
Sbjct: 304 RPNFAIILERIEYCTQDPDVINTALPIEYGPL 335
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 125/250 (50%), Gaps = 28/250 (11%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVK+L + + + AF+ E L+++++H +V+ VTQ P+ I+TEY+ G
Sbjct: 46 TKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENG 100
Query: 233 DLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
L +LK +K T+ + A IA GM ++ E IHRDL +NIL D+ K
Sbjct: 101 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCK 157
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQE 347
+ADFGL++L+ ED T E + ++ APE + K DV+SF ++L E
Sbjct: 158 IADFGLARLI-------EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 210
Query: 348 MI-EGCPPFPTKQEKEVPKAYIANERP--PFRAPTTHYAYGLRELIEDCWSEEPFRRPTF 404
++ G P+P EV + R P P Y +L+ CW E P RPTF
Sbjct: 211 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKERPEDRPTF 265
Query: 405 RQILMRLDDI 414
+ L+D
Sbjct: 266 DYLRSVLEDF 275
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 128/260 (49%), Gaps = 33/260 (12%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
VAVK L ++ E + + E+ +++ I +H N++ LGA TQ P+ ++ EY KG+
Sbjct: 116 VAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 173
Query: 234 LRAYLK------------------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
LR YL+ ++ K ++ + L ARGM YL + IHRD
Sbjct: 174 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL--ARGMEYLASQK---CIHRD 228
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N+L ++ +K+ADFGL++ + N + + T ++ APE + Y +
Sbjct: 229 LAARNVLVTENNVMKIADFGLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 285
Query: 336 VDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCW 394
DV+SF +++ E+ G P+P +E+ K R A T+ Y ++ DCW
Sbjct: 286 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY---MMMRDCW 342
Query: 395 SEEPFRRPTFRQILMRLDDI 414
P +RPTF+Q++ LD I
Sbjct: 343 HAVPSQRPTFKQLVEDLDRI 362
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 128/260 (49%), Gaps = 33/260 (12%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
VAVK L ++ E + + E+ +++ I +H N++ LGA TQ P+ ++ EY KG+
Sbjct: 70 VAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGN 127
Query: 234 LRAYLK------------------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
LR YL+ ++ K ++ + L ARGM YL + IHRD
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL--ARGMEYLASQK---CIHRD 182
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N+L ++ +K+ADFGL++ + N + + T ++ APE + Y +
Sbjct: 183 LAARNVLVTENNVMKIADFGLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 239
Query: 336 VDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCW 394
DV+SF +++ E+ G P+P +E+ K R A T+ Y ++ DCW
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY---MMMRDCW 296
Query: 395 SEEPFRRPTFRQILMRLDDI 414
P +RPTF+Q++ LD I
Sbjct: 297 HAVPSQRPTFKQLVEDLDRI 316
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 125/250 (50%), Gaps = 28/250 (11%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVK+L + + + AF+ E L+++++H +V+ VTQ P+ I+TEY+ G
Sbjct: 44 TKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENG 98
Query: 233 DLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
L +LK +K T+ + A IA GM ++ E IHRDL +NIL D+ K
Sbjct: 99 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCK 155
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQE 347
+ADFGL++L+ ED T E + ++ APE + K DV+SF ++L E
Sbjct: 156 IADFGLARLI-------EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 208
Query: 348 MI-EGCPPFPTKQEKEVPKAYIANERP--PFRAPTTHYAYGLRELIEDCWSEEPFRRPTF 404
++ G P+P EV + R P P Y +L+ CW E P RPTF
Sbjct: 209 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKERPEDRPTF 263
Query: 405 RQILMRLDDI 414
+ L+D
Sbjct: 264 DYLRSVLEDF 273
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 125/250 (50%), Gaps = 28/250 (11%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVK+L + + + AF+ E L+++++H +V+ VTQ P+ I+TEY+ G
Sbjct: 38 TKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENG 92
Query: 233 DLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
L +LK +K T+ + A IA GM ++ E IHRDL +NIL D+ K
Sbjct: 93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCK 149
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQE 347
+ADFGL++L+ ED T E + ++ APE + K DV+SF ++L E
Sbjct: 150 IADFGLARLI-------EDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 348 MI-EGCPPFPTKQEKEVPKAYIANERP--PFRAPTTHYAYGLRELIEDCWSEEPFRRPTF 404
++ G P+P EV + R P P Y +L+ CW E P RPTF
Sbjct: 203 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKERPEDRPTF 257
Query: 405 RQILMRLDDI 414
+ L+D
Sbjct: 258 DYLRSVLEDF 267
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 134/272 (49%), Gaps = 29/272 (10%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
QVAVKTL EV +++D++ F+ E ++ K H N+V+ +G QS P I+ E + GD
Sbjct: 54 QVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 111
Query: 234 LRAYLK-------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDS 286
L+++L+ Q +L + A DIA G YL EN IHRD+ N L
Sbjct: 112 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP 168
Query: 287 GHLKVA---DFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
G +VA DFG+++ + A+ ++ C ++ PE + + +K D +SF +
Sbjct: 169 GPGRVAKIGDFGMARDIYRASYYRKG---GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 225
Query: 344 ILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWSEEPFR 400
+L E+ G P+P+K +EV + + R PP P Y ++ CW +P
Sbjct: 226 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPED 280
Query: 401 RPTFRQILMRLDDIS---DQLSIKRHWKVGPL 429
RP F IL R++ + D ++ + GPL
Sbjct: 281 RPNFAIILERIEYCTQDPDVINTALPIEYGPL 312
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 125/250 (50%), Gaps = 28/250 (11%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVK+L + + + AF+ E L+++++H +V+ VTQ P+ I+TEY+ G
Sbjct: 47 TKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENG 101
Query: 233 DLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
L +LK +K T+ + A IA GM ++ E IHRDL +NIL D+ K
Sbjct: 102 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCK 158
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQE 347
+ADFGL++L+ ED T E + ++ APE + K DV+SF ++L E
Sbjct: 159 IADFGLARLI-------EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 211
Query: 348 MI-EGCPPFPTKQEKEVPKAYIANERP--PFRAPTTHYAYGLRELIEDCWSEEPFRRPTF 404
++ G P+P EV + R P P Y +L+ CW E P RPTF
Sbjct: 212 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKERPEDRPTF 266
Query: 405 RQILMRLDDI 414
+ L+D
Sbjct: 267 DYLRSVLEDF 276
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 134/272 (49%), Gaps = 29/272 (10%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
QVAVKTL EV +++D++ F+ E ++ K H N+V+ +G QS P I+ E + GD
Sbjct: 62 QVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGD 119
Query: 234 LRAYLK-------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDS 286
L+++L+ Q +L + A DIA G YL EN IHRD+ N L
Sbjct: 120 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP 176
Query: 287 GHLKVA---DFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
G +VA DFG+++ + A+ ++ C ++ PE + + +K D +SF +
Sbjct: 177 GPGRVAKIGDFGMARDIYRASYYRKG---GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 233
Query: 344 ILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWSEEPFR 400
+L E+ G P+P+K +EV + + R PP P Y ++ CW +P
Sbjct: 234 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPED 288
Query: 401 RPTFRQILMRLDDIS---DQLSIKRHWKVGPL 429
RP F IL R++ + D ++ + GPL
Sbjct: 289 RPNFAIILERIEYCTQDPDVINTALPIEYGPL 320
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 133/272 (48%), Gaps = 29/272 (10%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
QVAVKTL EV +++D++ F+ E ++ K H N+V+ +G QS P I+ E + GD
Sbjct: 80 QVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 137
Query: 234 LRAYLK-------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDS 286
L+++L+ Q +L + A DIA G YL EN IHRD+ N L
Sbjct: 138 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP 194
Query: 287 GHLKVA---DFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
G +VA DFG+++ + A ++ C ++ PE + + +K D +SF +
Sbjct: 195 GPGRVAKIGDFGMARDIYRAGYYRKG---GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 251
Query: 344 ILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWSEEPFR 400
+L E+ G P+P+K +EV + + R PP P Y ++ CW +P
Sbjct: 252 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPED 306
Query: 401 RPTFRQILMRLDDIS---DQLSIKRHWKVGPL 429
RP F IL R++ + D ++ + GPL
Sbjct: 307 RPNFAIILERIEYCTQDPDVINTALPIEYGPL 338
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 134/272 (49%), Gaps = 29/272 (10%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
QVAVKTL EV +++D++ F+ E ++ K H N+V+ +G QS P I+ E + GD
Sbjct: 63 QVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 234 LRAYLK-------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDS 286
L+++L+ Q +L + A DIA G YL EN IHRD+ N L
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP 177
Query: 287 GHLKVA---DFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
G +VA DFG+++ + A+ ++ C ++ PE + + +K D +SF +
Sbjct: 178 GPGRVAKIGDFGMARDIYRASYYRKG---GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 234
Query: 344 ILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWSEEPFR 400
+L E+ G P+P+K +EV + + R PP P Y ++ CW +P
Sbjct: 235 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPED 289
Query: 401 RPTFRQILMRLDDIS---DQLSIKRHWKVGPL 429
RP F IL R++ + D ++ + GPL
Sbjct: 290 RPNFAIILERIEYCTQDPDVINTALPIEYGPL 321
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 138/282 (48%), Gaps = 30/282 (10%)
Query: 143 PEYEIDPKELDFSNSVEITK-GTFRIASWRG-TQVAVKTLGEEVFTDEDKVKAFIDELAL 200
PE+E+ + L + + G + + G T+VAVK+L + + + AF+ E L
Sbjct: 2 PEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANL 57
Query: 201 LQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIAR 258
+++++H +V+ VTQ P+ I+TEY+ G L +LK +K T+ + A IA
Sbjct: 58 MKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 259 GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETS 318
GM ++ E IHR+L +NIL D+ K+ADFGL++L+ ED T E +
Sbjct: 117 GMAFIEERN---YIHRNLRAANILVSDTLSCKIADFGLARLI-------EDNEYTAREGA 166
Query: 319 ---WRYAAPEVYKNEEYDTKVDVFSFALILQEMI-EGCPPFPTKQEKEVPKAYIANERP- 373
++ APE + K DV+SF ++L E++ G P+P EV + R
Sbjct: 167 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 226
Query: 374 -PFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
P P Y +L+ CW E P RPTF + L+D
Sbjct: 227 RPDNCPEELY-----QLMRLCWKERPEDRPTFDYLRSVLEDF 263
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 134/272 (49%), Gaps = 29/272 (10%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
QVAVKTL EV +++D++ F+ E ++ K H N+V+ +G QS P I+ E + GD
Sbjct: 77 QVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGD 134
Query: 234 LRAYLK-------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDS 286
L+++L+ Q +L + A DIA G YL EN IHRD+ N L
Sbjct: 135 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP 191
Query: 287 GHLKVA---DFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
G +VA DFG+++ + A+ ++ C ++ PE + + +K D +SF +
Sbjct: 192 GPGRVAKIGDFGMARDIYRASYYRKG---GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 248
Query: 344 ILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWSEEPFR 400
+L E+ G P+P+K +EV + + R PP P Y ++ CW +P
Sbjct: 249 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPED 303
Query: 401 RPTFRQILMRLDDIS---DQLSIKRHWKVGPL 429
RP F IL R++ + D ++ + GPL
Sbjct: 304 RPNFAIILERIEYCTQDPDVINTALPIEYGPL 335
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 134/272 (49%), Gaps = 29/272 (10%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
QVAVKTL EV +++D++ F+ E ++ K H N+V+ +G QS P I+ E + GD
Sbjct: 62 QVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 119
Query: 234 LRAYLK-------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDS 286
L+++L+ Q +L + A DIA G YL EN IHRD+ N L
Sbjct: 120 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP 176
Query: 287 GHLKVA---DFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
G +VA DFG+++ + A+ ++ C ++ PE + + +K D +SF +
Sbjct: 177 GPGRVAKIGDFGMARDIYRASYYRKG---GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 233
Query: 344 ILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWSEEPFR 400
+L E+ G P+P+K +EV + + R PP P Y ++ CW +P
Sbjct: 234 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPED 288
Query: 401 RPTFRQILMRLDDIS---DQLSIKRHWKVGPL 429
RP F IL R++ + D ++ + GPL
Sbjct: 289 RPNFAIILERIEYCTQDPDVINTALPIEYGPL 320
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 128/260 (49%), Gaps = 33/260 (12%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
VAVK L ++ E + + E+ +++ I +H N++ LGA TQ P+ ++ EY KG+
Sbjct: 70 VAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 127
Query: 234 LRAYLK------------------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
LR YL+ ++ K ++ + L ARGM YL + IHRD
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL--ARGMEYLASQK---CIHRD 182
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N+L ++ +++ADFGL++ + N + + T ++ APE + Y +
Sbjct: 183 LAARNVLVTENNVMRIADFGLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 239
Query: 336 VDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCW 394
DV+SF +++ E+ G P+P +E+ K R A T+ Y ++ DCW
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY---MMMRDCW 296
Query: 395 SEEPFRRPTFRQILMRLDDI 414
P +RPTF+Q++ LD I
Sbjct: 297 HAVPSQRPTFKQLVEDLDRI 316
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 134/272 (49%), Gaps = 29/272 (10%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
QVAVKTL EV +++D++ F+ E ++ K H N+V+ +G QS P I+ E + GD
Sbjct: 79 QVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 136
Query: 234 LRAYLK-------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDS 286
L+++L+ Q +L + A DIA G YL EN IHRD+ N L
Sbjct: 137 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP 193
Query: 287 GHLKVA---DFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
G +VA DFG+++ + A+ ++ C ++ PE + + +K D +SF +
Sbjct: 194 GPGRVAKIGDFGMARDIYRASYYRKG---GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 250
Query: 344 ILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWSEEPFR 400
+L E+ G P+P+K +EV + + R PP P Y ++ CW +P
Sbjct: 251 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPED 305
Query: 401 RPTFRQILMRLDDIS---DQLSIKRHWKVGPL 429
RP F IL R++ + D ++ + GPL
Sbjct: 306 RPNFAIILERIEYCTQDPDVINTALPIEYGPL 337
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 134/272 (49%), Gaps = 29/272 (10%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
QVAVKTL EV +++D++ F+ E ++ K H N+V+ +G QS P I+ E + GD
Sbjct: 69 QVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 126
Query: 234 LRAYLK-------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDS 286
L+++L+ Q +L + A DIA G YL EN IHRD+ N L
Sbjct: 127 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP 183
Query: 287 GHLKVA---DFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
G +VA DFG+++ + A+ ++ C ++ PE + + +K D +SF +
Sbjct: 184 GPGRVAKIGDFGMARDIYRASYYRKG---GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 240
Query: 344 ILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWSEEPFR 400
+L E+ G P+P+K +EV + + R PP P Y ++ CW +P
Sbjct: 241 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPED 295
Query: 401 RPTFRQILMRLDDIS---DQLSIKRHWKVGPL 429
RP F IL R++ + D ++ + GPL
Sbjct: 296 RPNFAIILERIEYCTQDPDVINTALPIEYGPL 327
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 133/272 (48%), Gaps = 29/272 (10%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
QVAVKTL EV +++D++ F+ E ++ K H N+V+ +G QS P I+ E + GD
Sbjct: 103 QVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 160
Query: 234 LRAYLK-------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDS 286
L+++L+ Q +L + A DIA G YL EN IHRD+ N L
Sbjct: 161 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP 217
Query: 287 GHLKVA---DFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
G +VA DFG+++ + A ++ C ++ PE + + +K D +SF +
Sbjct: 218 GPGRVAKIGDFGMARDIYRAGYYRKG---GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 274
Query: 344 ILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWSEEPFR 400
+L E+ G P+P+K +EV + + R PP P Y ++ CW +P
Sbjct: 275 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPED 329
Query: 401 RPTFRQILMRLDDIS---DQLSIKRHWKVGPL 429
RP F IL R++ + D ++ + GPL
Sbjct: 330 RPNFAIILERIEYCTQDPDVINTALPIEYGPL 361
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 134/268 (50%), Gaps = 32/268 (11%)
Query: 158 VEITKGTFR---IASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
V++ +G F + +W GT +VA+KTL + E AF+ E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGA--LKPTLAVKFALDIARGMNYLHENRPEAI 271
AV P+ IV EY+ KG L +LK + L+ V A IA GM Y+
Sbjct: 79 YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 272 IHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETS---WRYAAPEVYK 328
+HRDL +NIL ++ KVADFGL++L+ ED T + + ++ APE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI-------EDNEYTARQGAKFPIKWTAPEAAL 188
Query: 329 NEEYDTKVDVFSFALILQEM-IEGCPPFPTKQEKEVPKAYIANERPPF--RAPTTHYAYG 385
+ K DV+SF ++L E+ +G P+P +EV R P P +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES----- 243
Query: 386 LRELIEDCWSEEPFRRPTFRQILMRLDD 413
L +L+ CW ++P RPTF + L+D
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 134/272 (49%), Gaps = 29/272 (10%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
QVAVKTL EV +++D++ F+ E ++ K H N+V+ +G QS P I+ E + GD
Sbjct: 63 QVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 234 LRAYLK-------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDS 286
L+++L+ Q +L + A DIA G YL EN IHRD+ N L
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP 177
Query: 287 GHLKVA---DFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
G +VA DFG+++ + A+ ++ C ++ PE + + +K D +SF +
Sbjct: 178 GPGRVAKIGDFGMAQDIYRASYYRKG---GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 234
Query: 344 ILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWSEEPFR 400
+L E+ G P+P+K +EV + + R PP P Y ++ CW +P
Sbjct: 235 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPED 289
Query: 401 RPTFRQILMRLDDIS---DQLSIKRHWKVGPL 429
RP F IL R++ + D ++ + GPL
Sbjct: 290 RPNFAIILERIEYCTQDPDVINTALPIEYGPL 321
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 134/272 (49%), Gaps = 29/272 (10%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
QVAVKTL EV +++D++ F+ E ++ K H N+V+ +G QS P I+ E + GD
Sbjct: 89 QVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 146
Query: 234 LRAYLK-------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDS 286
L+++L+ Q +L + A DIA G YL EN IHRD+ N L
Sbjct: 147 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP 203
Query: 287 GHLKVA---DFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
G +VA DFG+++ + A+ ++ C ++ PE + + +K D +SF +
Sbjct: 204 GPGRVAKIGDFGMARDIYRASYYRKG---GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 260
Query: 344 ILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWSEEPFR 400
+L E+ G P+P+K +EV + + R PP P Y ++ CW +P
Sbjct: 261 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPED 315
Query: 401 RPTFRQILMRLDDIS---DQLSIKRHWKVGPL 429
RP F IL R++ + D ++ + GPL
Sbjct: 316 RPNFAIILERIEYCTQDPDVINTALPIEYGPL 347
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 137/287 (47%), Gaps = 33/287 (11%)
Query: 137 QNAREVPEYEID-PKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFI 195
++A E+P + K+L E+ T+ + T+VAVKT+ + V+AF+
Sbjct: 180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYN----KHTKVAVKTMKPGSMS----VEAFL 231
Query: 196 DELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFA 253
E +++ ++H +V+ L AV P+ I+TE++ KG L +LK K L + F+
Sbjct: 232 AEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 290
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVT 313
IA GM ++ + IHRDL +NIL S K+ADFGL++++ ED T
Sbjct: 291 AQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVI-------EDNEYT 340
Query: 314 CEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIA 369
E + ++ APE + K DV+SF ++L E++ G P+P EV +A
Sbjct: 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 400
Query: 370 NERPPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
R P P Y +R CW P RPTF I LDD
Sbjct: 401 GYRMPRPENCPEELYNIMMR-----CWKNRPEERPTFEYIQSVLDDF 442
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 127/260 (48%), Gaps = 33/260 (12%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
VAVK L ++ E + + E+ +++ I +H N++ LGA TQ P+ ++ Y KG+
Sbjct: 70 VAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGN 127
Query: 234 LRAYLK------------------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
LR YL+ ++ K ++ + L ARGM YL + IHRD
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL--ARGMEYLASQK---CIHRD 182
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N+L ++ +K+ADFGL++ + N + + T ++ APE + Y +
Sbjct: 183 LAARNVLVTENNVMKIADFGLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 239
Query: 336 VDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCW 394
DV+SF +++ E+ G P+P +E+ K R A T+ Y ++ DCW
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY---MMMRDCW 296
Query: 395 SEEPFRRPTFRQILMRLDDI 414
P +RPTF+Q++ LD I
Sbjct: 297 HAVPSQRPTFKQLVEDLDRI 316
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 127/260 (48%), Gaps = 33/260 (12%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
VAVK L ++ E + + E+ +++ I +H N++ LGA TQ P+ ++ Y KG+
Sbjct: 70 VAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGN 127
Query: 234 LRAYLK------------------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
LR YL+ ++ K ++ + L ARGM YL + IHRD
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL--ARGMEYLASQK---CIHRD 182
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N+L ++ +K+ADFGL++ + N + + T ++ APE + Y +
Sbjct: 183 LAARNVLVTENNVMKIADFGLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 239
Query: 336 VDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCW 394
DV+SF +++ E+ G P+P +E+ K R A T+ Y ++ DCW
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY---MMMRDCW 296
Query: 395 SEEPFRRPTFRQILMRLDDI 414
P +RPTF+Q++ LD I
Sbjct: 297 HAVPSQRPTFKQLVEDLDRI 316
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 137/287 (47%), Gaps = 33/287 (11%)
Query: 137 QNAREVPEYEID-PKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFI 195
++A E+P + K+L E+ T+ + T+VAVKT+ + V+AF+
Sbjct: 7 KDAWEIPRESLKLEKKLGAGQFGEVWMATYN----KHTKVAVKTMKPGSMS----VEAFL 58
Query: 196 DELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLA--VKFA 253
E +++ ++H +V+ L AV P+ I+TE++ KG L +LK K L + F+
Sbjct: 59 AEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 117
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVT 313
IA GM ++ + IHRDL +NIL S K+ADFGL++++ ED T
Sbjct: 118 AQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVI-------EDNEYT 167
Query: 314 CEETS---WRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIA 369
E + ++ APE + K DV+SF ++L E++ G P+P EV +A
Sbjct: 168 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 227
Query: 370 NERPPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
R P P Y +R CW P RPTF I LDD
Sbjct: 228 GYRMPRPENCPEELYNIMMR-----CWKNRPEERPTFEYIQSVLDDF 269
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 132/252 (52%), Gaps = 20/252 (7%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-MIVTEYLPKG 232
Q A+K+L T+ +V+AF+ E L++ + HPNV+ +G + + ++ Y+ G
Sbjct: 51 QCAIKSLSR--ITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHG 108
Query: 233 DLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
DL +++ PT+ + F L +ARGM YL E + +HRDL N + D+S +K
Sbjct: 109 DLLQFIRSPQR-NPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVK 164
Query: 291 VADFGLSK--LLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEM 348
VADFGL++ L + +V++ R ++ A E + + TK DV+SF ++L E+
Sbjct: 165 VADFGLARDILDREYYSVQQHRHA---RLPVKWTALESLQTYRFTTKSDVWSFGVLLWEL 221
Query: 349 I-EGCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAY-GLRELIEDCWSEEPFRRPTFRQ 406
+ G PP+ ++ ++A R R P Y L ++++ CW +P RPTFR
Sbjct: 222 LTRGAPPYRHIDPFDLTH-FLAQGR---RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRV 277
Query: 407 ILMRLDDISDQL 418
++ ++ I L
Sbjct: 278 LVGEVEQIVSAL 289
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 42/260 (16%)
Query: 176 AVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
A+K + E + +D + F EL +L K+ HPN++ LGA + + EY P G+L
Sbjct: 46 AIKRMKE--YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 103
Query: 235 RAYLKQKGALK--PTLAV--------------KFALDIARGMNYLHENRPEAIIHRDLEP 278
+L++ L+ P A+ FA D+ARGM+YL + + IHRDL
Sbjct: 104 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAA 160
Query: 279 SNILRDDSGHLKVADFGLSKLLK-FANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVD 337
NIL ++ K+ADFGLS+ + + PV R+ A E Y T D
Sbjct: 161 RNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPV-------RWMAIESLNYSVYTTNSD 213
Query: 338 VFSFALILQEMIE-GCPPFPTKQEKEV----PKAYIANERPPFRAPTTHYAYGLRELIED 392
V+S+ ++L E++ G P+ E+ P+ Y + P Y +L+
Sbjct: 214 VWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK--PLNCDDEVY-----DLMRQ 266
Query: 393 CWSEEPFRRPTFRQILMRLD 412
CW E+P+ RP+F QIL+ L+
Sbjct: 267 CWREKPYERPSFAQILVSLN 286
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 127/265 (47%), Gaps = 42/265 (15%)
Query: 176 AVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
A+K + E + +D + F EL +L K+ HPN++ LGA + + EY P G+L
Sbjct: 56 AIKRMKE--YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 113
Query: 235 RAYLKQKGALK--PTLAV--------------KFALDIARGMNYLHENRPEAIIHRDLEP 278
+L++ L+ P A+ FA D+ARGM+YL + + IHRDL
Sbjct: 114 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAA 170
Query: 279 SNILRDDSGHLKVADFGLSKLLK-FANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVD 337
NIL ++ K+ADFGLS+ + + PV R+ A E Y T D
Sbjct: 171 RNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPV-------RWMAIESLNYSVYTTNSD 223
Query: 338 VFSFALILQEMIE-GCPPFPTKQEKEV----PKAYIANERPPFRAPTTHYAYGLRELIED 392
V+S+ ++L E++ G P+ E+ P+ Y + P Y +L+
Sbjct: 224 VWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK--PLNCDDEVY-----DLMRQ 276
Query: 393 CWSEEPFRRPTFRQILMRLDDISDQ 417
CW E+P+ RP+F QIL+ L+ + ++
Sbjct: 277 CWREKPYERPSFAQILVSLNRMLEE 301
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ GT + AVK+L TD +V F+ E +++ HPNV+ LG +S
Sbjct: 64 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 121
Query: 220 --TPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRD 275
+P+ +V Y+ GDLR +++ + PT+ + F L +A+GM YL + +HRD
Sbjct: 122 EGSPL-VVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 176
Query: 276 LEPSNILRDDSGHLKVADFGLSK------LLKFANTVKEDRPVTCEETSWRYAAPEVYKN 329
L N + D+ +KVADFGL++ N PV ++ A E +
Sbjct: 177 LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-------KWMALESLQT 229
Query: 330 EEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGL 386
+++ TK DV+SF ++L E M G PP+P ++ + R P P Y
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY---- 285
Query: 387 RELIEDCWSEEPFRRPTFRQILMRLDDI 414
E++ CW + RP+F +++ R+ I
Sbjct: 286 -EVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 128/262 (48%), Gaps = 20/262 (7%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ GT + AVK+L TD +V F+ E +++ HPNV+ LG +S
Sbjct: 45 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 102
Query: 220 --TPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRD 275
+P+ +V Y+ GDLR +++ + PT+ + F L +A+GM YL + +HRD
Sbjct: 103 EGSPL-VVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 157
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N + D+ +KVADFGL++ + + T + ++ A E + +++ TK
Sbjct: 158 LAARNCMLDEKFTVKVADFGLARDM-YDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTK 216
Query: 336 VDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIED 392
DV+SF ++L E M G PP+P ++ + R P P Y E++
Sbjct: 217 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLK 271
Query: 393 CWSEEPFRRPTFRQILMRLDDI 414
CW + RP+F +++ R+ I
Sbjct: 272 CWHPKAEMRPSFSELVSRISAI 293
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ GT + AVK+L TD +V F+ E +++ HPNV+ LG +S
Sbjct: 44 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 101
Query: 220 --TPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRD 275
+P+ +V Y+ GDLR +++ + PT+ + F L +A+GM YL + +HRD
Sbjct: 102 EGSPL-VVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 156
Query: 276 LEPSNILRDDSGHLKVADFGLSK------LLKFANTVKEDRPVTCEETSWRYAAPEVYKN 329
L N + D+ +KVADFGL++ N PV ++ A E +
Sbjct: 157 LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-------KWMALESLQT 209
Query: 330 EEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGL 386
+++ TK DV+SF ++L E M G PP+P ++ + R P P Y
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY---- 265
Query: 387 RELIEDCWSEEPFRRPTFRQILMRLDDI 414
E++ CW + RP+F +++ R+ I
Sbjct: 266 -EVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ GT + AVK+L TD +V F+ E +++ HPNV+ LG +S
Sbjct: 43 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 100
Query: 220 --TPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRD 275
+P+ +V Y+ GDLR +++ + PT+ + F L +A+GM YL + +HRD
Sbjct: 101 EGSPL-VVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 155
Query: 276 LEPSNILRDDSGHLKVADFGLSK------LLKFANTVKEDRPVTCEETSWRYAAPEVYKN 329
L N + D+ +KVADFGL++ N PV ++ A E +
Sbjct: 156 LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-------KWMALESLQT 208
Query: 330 EEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGL 386
+++ TK DV+SF ++L E M G PP+P ++ + R P P Y
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY---- 264
Query: 387 RELIEDCWSEEPFRRPTFRQILMRLDDI 414
E++ CW + RP+F +++ R+ I
Sbjct: 265 -EVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ GT + AVK+L TD +V F+ E +++ HPNV+ LG +S
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 220 --TPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRD 275
+P+ +V Y+ GDLR +++ + PT+ + F L +A+GM YL + +HRD
Sbjct: 104 EGSPL-VVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 158
Query: 276 LEPSNILRDDSGHLKVADFGLSK------LLKFANTVKEDRPVTCEETSWRYAAPEVYKN 329
L N + D+ +KVADFGL++ N PV ++ A E +
Sbjct: 159 LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-------KWMALESLQT 211
Query: 330 EEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGL 386
+++ TK DV+SF ++L E M G PP+P ++ + R P P Y
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY---- 267
Query: 387 RELIEDCWSEEPFRRPTFRQILMRLDDI 414
E++ CW + RP+F +++ R+ I
Sbjct: 268 -EVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ GT + AVK+L TD +V F+ E +++ HPNV+ LG +S
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 98
Query: 220 --TPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRD 275
+P+ +V Y+ GDLR +++ + PT+ + F L +A+GM YL + +HRD
Sbjct: 99 EGSPL-VVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 153
Query: 276 LEPSNILRDDSGHLKVADFGLSK------LLKFANTVKEDRPVTCEETSWRYAAPEVYKN 329
L N + D+ +KVADFGL++ N PV ++ A E +
Sbjct: 154 LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-------KWMALESLQT 206
Query: 330 EEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGL 386
+++ TK DV+SF ++L E M G PP+P ++ + R P P Y
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY---- 262
Query: 387 RELIEDCWSEEPFRRPTFRQILMRLDDI 414
E++ CW + RP+F +++ R+ I
Sbjct: 263 -EVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ GT + AVK+L TD +V F+ E +++ HPNV+ LG +S
Sbjct: 45 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 102
Query: 220 --TPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRD 275
+P+ +V Y+ GDLR +++ + PT+ + F L +A+GM YL + +HRD
Sbjct: 103 EGSPL-VVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 157
Query: 276 LEPSNILRDDSGHLKVADFGLSK------LLKFANTVKEDRPVTCEETSWRYAAPEVYKN 329
L N + D+ +KVADFGL++ N PV ++ A E +
Sbjct: 158 LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-------KWMALESLQT 210
Query: 330 EEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGL 386
+++ TK DV+SF ++L E M G PP+P ++ + R P P Y
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY---- 266
Query: 387 RELIEDCWSEEPFRRPTFRQILMRLDDI 414
E++ CW + RP+F +++ R+ I
Sbjct: 267 -EVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ GT + AVK+L TD +V F+ E +++ HPNV+ LG +S
Sbjct: 38 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 95
Query: 220 --TPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRD 275
+P+ +V Y+ GDLR +++ + PT+ + F L +A+GM YL + +HRD
Sbjct: 96 EGSPL-VVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 150
Query: 276 LEPSNILRDDSGHLKVADFGLSK------LLKFANTVKEDRPVTCEETSWRYAAPEVYKN 329
L N + D+ +KVADFGL++ N PV ++ A E +
Sbjct: 151 LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-------KWMALESLQT 203
Query: 330 EEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGL 386
+++ TK DV+SF ++L E M G PP+P ++ + R P P Y
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY---- 259
Query: 387 RELIEDCWSEEPFRRPTFRQILMRLDDI 414
E++ CW + RP+F +++ R+ I
Sbjct: 260 -EVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ GT + AVK+L TD +V F+ E +++ HPNV+ LG +S
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 220 --TPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRD 275
+P+ +V Y+ GDLR +++ + PT+ + F L +A+GM YL + +HRD
Sbjct: 104 EGSPL-VVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 158
Query: 276 LEPSNILRDDSGHLKVADFGLSK------LLKFANTVKEDRPVTCEETSWRYAAPEVYKN 329
L N + D+ +KVADFGL++ N PV ++ A E +
Sbjct: 159 LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-------KWMALESLQT 211
Query: 330 EEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGL 386
+++ TK DV+SF ++L E M G PP+P ++ + R P P Y
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY---- 267
Query: 387 RELIEDCWSEEPFRRPTFRQILMRLDDI 414
E++ CW + RP+F +++ R+ I
Sbjct: 268 -EVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ GT + AVK+L TD +V F+ E +++ HPNV+ LG +S
Sbjct: 65 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 122
Query: 220 --TPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRD 275
+P+ +V Y+ GDLR +++ + PT+ + F L +A+GM YL + +HRD
Sbjct: 123 EGSPL-VVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 177
Query: 276 LEPSNILRDDSGHLKVADFGLSK------LLKFANTVKEDRPVTCEETSWRYAAPEVYKN 329
L N + D+ +KVADFGL++ N PV ++ A E +
Sbjct: 178 LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-------KWMALESLQT 230
Query: 330 EEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGL 386
+++ TK DV+SF ++L E M G PP+P ++ + R P P Y
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY---- 286
Query: 387 RELIEDCWSEEPFRRPTFRQILMRLDDI 414
E++ CW + RP+F +++ R+ I
Sbjct: 287 -EVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 137 QNAREVPEYEID-PKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFI 195
++A E+P + K+L E+ T+ + T+VAVKT+ + V+AF+
Sbjct: 174 KDAWEIPRESLKLEKKLGAGQFGEVWMATYN----KHTKVAVKTMKPGSMS----VEAFL 225
Query: 196 DELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFA 253
E +++ ++H +V+ L AV P+ I+TE++ KG L +LK K L + F+
Sbjct: 226 AEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 284
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVT 313
IA GM ++ + IHRDL +NIL S K+ADFGL++ V P+
Sbjct: 285 AQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLAR-------VGAKFPI- 333
Query: 314 CEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER 372
++ APE + K DV+SF ++L E++ G P+P EV +A R
Sbjct: 334 ------KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR 387
Query: 373 PPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
P P Y +R CW P RPTF I LDD
Sbjct: 388 MPRPENCPEELYNIMMR-----CWKNRPEERPTFEYIQSVLDDF 426
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 142/310 (45%), Gaps = 64/310 (20%)
Query: 141 EVPEYEIDPKELDFSNSV------EITKGT-FRIASWRG-TQVAVKTLGEEVFTDEDKVK 192
E P++E K L ++ ++ K T F + G T VAVK L E E ++
Sbjct: 14 EDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE--LR 71
Query: 193 AFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLA--- 249
+ E +L+++ HP+V++ GA +Q P++++ EY G LR +L++ + P
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 250 ---------------------VKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
+ FA I++GM YL E + ++HRDL NIL +
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRK 188
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEE--TSWRYAAPEVYKNEEYDTKVDVFSFALILQ 346
+K++DFGLS+ + +ED V + ++ A E + Y T+ DV+SF ++L
Sbjct: 189 MKISDFGLSR-----DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLW 243
Query: 347 EMIE-GCPPFPTKQEKEVPKAYIAN--------ERPPFRAPTTHYAYGLRELIEDCWSEE 397
E++ G P+P +P + N ERP + + + L+ CW +E
Sbjct: 244 EIVTLGGNPYPG-----IPPERLFNLLKTGHRMERP------DNCSEEMYRLMLQCWKQE 292
Query: 398 PFRRPTFRQI 407
P +RP F I
Sbjct: 293 PDKRPVFADI 302
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 131/264 (49%), Gaps = 24/264 (9%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ GT + AVK+L TD +V F+ E +++ HPNV+ LG +S
Sbjct: 47 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 104
Query: 220 --TPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRD 275
+P+ +V Y+ GDLR +++ + PT+ + F L +A+GM +L + +HRD
Sbjct: 105 EGSPL-VVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 159
Query: 276 LEPSNILRDDSGHLKVADFGLSK--LLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYD 333
L N + D+ +KVADFGL++ L K ++V T + ++ A E + +++
Sbjct: 160 LAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNK---TGAKLPVKWMALESLQTQKFT 216
Query: 334 TKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELI 390
TK DV+SF ++L E M G PP+P ++ + R P P Y E++
Sbjct: 217 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVM 271
Query: 391 EDCWSEEPFRRPTFRQILMRLDDI 414
CW + RP+F +++ R+ I
Sbjct: 272 LKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 128/262 (48%), Gaps = 20/262 (7%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ GT + AVK+L TD +V F+ E +++ HPNV+ LG +S
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 162
Query: 220 --TPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRD 275
+P+ +V Y+ GDLR +++ + PT+ + F L +A+GM +L + +HRD
Sbjct: 163 EGSPL-VVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 217
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N + D+ +KVADFGL++ + + T + ++ A E + +++ TK
Sbjct: 218 LAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 276
Query: 336 VDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIED 392
DV+SF ++L E M G PP+P ++ + R P P Y E++
Sbjct: 277 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLK 331
Query: 393 CWSEEPFRRPTFRQILMRLDDI 414
CW + RP+F +++ R+ I
Sbjct: 332 CWHPKAEMRPSFSELVSRISAI 353
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 44/265 (16%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
+VAVK L DE + A + EL ++ + +H N+V LGA T P++++TEY G
Sbjct: 78 KVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 233 DLRAYLKQKGAL---KPTLAV-----------KFALDIARGMNYLHENRPEAIIHRDLEP 278
DL +L++K + P A+ F+ +A+GM +L IHRD+
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN---CIHRDVAA 192
Query: 279 SNILRDDSGHLKVADFGLSK-LLKFANTVKEDR---PVTCEETSWRYAAPEVYKNEEYDT 334
N+L + K+ DFGL++ ++ +N + + PV ++ APE + Y
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-------KWMAPESIFDCVYTV 245
Query: 335 KVDVFSFALILQEMIE-GCPPFP-----TKQEKEVPKAYIANERPPFRAPTTHYAYGLRE 388
+ DV+S+ ++L E+ G P+P +K K V Y +P F AP Y+
Sbjct: 246 QSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY-QMAQPAF-APKNIYS----- 298
Query: 389 LIEDCWSEEPFRRPTFRQILMRLDD 413
+++ CW+ EP RPTF+QI L +
Sbjct: 299 IMQACWALEPTHRPTFQQICSFLQE 323
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 44/265 (16%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
+VAVK L DE + A + EL ++ + +H N+V LGA T P++++TEY G
Sbjct: 78 KVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 233 DLRAYLKQKGAL---KPTLAV-----------KFALDIARGMNYLHENRPEAIIHRDLEP 278
DL +L++K + P A+ F+ +A+GM +L IHRD+
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAA 192
Query: 279 SNILRDDSGHLKVADFGLSK-LLKFANTVKEDR---PVTCEETSWRYAAPEVYKNEEYDT 334
N+L + K+ DFGL++ ++ +N + + PV ++ APE + Y
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-------KWMAPESIFDCVYTV 245
Query: 335 KVDVFSFALILQEMIE-GCPPFP-----TKQEKEVPKAYIANERPPFRAPTTHYAYGLRE 388
+ DV+S+ ++L E+ G P+P +K K V Y +P F AP Y+
Sbjct: 246 QSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY-QMAQPAF-APKNIYS----- 298
Query: 389 LIEDCWSEEPFRRPTFRQILMRLDD 413
+++ CW+ EP RPTF+QI L +
Sbjct: 299 IMQACWALEPTHRPTFQQICSFLQE 323
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 128/262 (48%), Gaps = 20/262 (7%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ GT + AVK+L TD +V F+ E +++ HPNV+ LG +S
Sbjct: 51 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 108
Query: 220 --TPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRD 275
+P+ +V Y+ GDLR +++ + PT+ + F L +A+GM +L + +HRD
Sbjct: 109 EGSPL-VVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 163
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N + D+ +KVADFGL++ + + T + ++ A E + +++ TK
Sbjct: 164 LAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 222
Query: 336 VDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIED 392
DV+SF ++L E M G PP+P ++ + R P P Y E++
Sbjct: 223 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLK 277
Query: 393 CWSEEPFRRPTFRQILMRLDDI 414
CW + RP+F +++ R+ I
Sbjct: 278 CWHPKAEMRPSFSELVSRISAI 299
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 108/227 (47%), Gaps = 23/227 (10%)
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFA 253
I EL +L + P +V F GA + I E++ G L LK+ G + + K +
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL--KFANTVKEDRP 311
+ + +G+ YL E I+HRD++PSNIL + G +K+ DFG+S L AN+ R
Sbjct: 111 IAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR- 167
Query: 312 VTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFP---TKQEKEVPKA-- 366
Y +PE + Y + D++S L L EM G P P K++ P A
Sbjct: 168 --------SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIF 219
Query: 367 ----YIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILM 409
YI NE PP + P+ ++ ++ + C + P R +Q+++
Sbjct: 220 ELLDYIVNEPPP-KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 265
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 142/310 (45%), Gaps = 64/310 (20%)
Query: 141 EVPEYEIDPKELDFSNSV------EITKGT-FRIASWRG-TQVAVKTLGEEVFTDEDKVK 192
E P++E K L ++ ++ K T F + G T VAVK L E E ++
Sbjct: 14 EDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE--LR 71
Query: 193 AFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLA--- 249
+ E +L+++ HP+V++ GA +Q P++++ EY G LR +L++ + P
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 250 ---------------------VKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
+ FA I++GM YL E +++HRDL NIL +
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRK 188
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEE--TSWRYAAPEVYKNEEYDTKVDVFSFALILQ 346
+K++DFGLS+ + +ED V + ++ A E + Y T+ DV+SF ++L
Sbjct: 189 MKISDFGLSR-----DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLW 243
Query: 347 EMIE-GCPPFPTKQEKEVPKAYIAN--------ERPPFRAPTTHYAYGLRELIEDCWSEE 397
E++ G P+P +P + N ERP + + + L+ CW +E
Sbjct: 244 EIVTLGGNPYPG-----IPPERLFNLLKTGHRMERP------DNCSEEMYRLMLQCWKQE 292
Query: 398 PFRRPTFRQI 407
P +RP F I
Sbjct: 293 PDKRPVFADI 302
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 128/262 (48%), Gaps = 20/262 (7%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ GT + AVK+L TD +V F+ E +++ HPNV+ LG +S
Sbjct: 47 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 104
Query: 220 --TPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRD 275
+P+ +V Y+ GDLR +++ + PT+ + F L +A+GM +L + +HRD
Sbjct: 105 EGSPL-VVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 159
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N + D+ +KVADFGL++ + + T + ++ A E + +++ TK
Sbjct: 160 LAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 218
Query: 336 VDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIED 392
DV+SF ++L E M G PP+P ++ + R P P Y E++
Sbjct: 219 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLK 273
Query: 393 CWSEEPFRRPTFRQILMRLDDI 414
CW + RP+F +++ R+ I
Sbjct: 274 CWHPKAEMRPSFSELVSRISAI 295
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 127/265 (47%), Gaps = 42/265 (15%)
Query: 176 AVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
A+K + E + +D + F EL +L K+ HPN++ LGA + + EY P G+L
Sbjct: 53 AIKRMKE--YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 110
Query: 235 RAYLKQKGALK--PTLAVK--------------FALDIARGMNYLHENRPEAIIHRDLEP 278
+L++ L+ P A+ FA D+ARGM+YL + + IHR+L
Sbjct: 111 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRNLAA 167
Query: 279 SNILRDDSGHLKVADFGLSKLLK-FANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVD 337
NIL ++ K+ADFGLS+ + + PV R+ A E Y T D
Sbjct: 168 RNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPV-------RWMAIESLNYSVYTTNSD 220
Query: 338 VFSFALILQEMIE-GCPPFPTKQEKEV----PKAYIANERPPFRAPTTHYAYGLRELIED 392
V+S+ ++L E++ G P+ E+ P+ Y + P Y +L+
Sbjct: 221 VWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK--PLNCDDEVY-----DLMRQ 273
Query: 393 CWSEEPFRRPTFRQILMRLDDISDQ 417
CW E+P+ RP+F QIL+ L+ + ++
Sbjct: 274 CWREKPYERPSFAQILVSLNRMLEE 298
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 128/262 (48%), Gaps = 20/262 (7%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ GT + AVK+L TD +V F+ E +++ HPNV+ LG +S
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 220 --TPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRD 275
+P+ +V Y+ GDLR +++ + PT+ + F L +A+GM +L + +HRD
Sbjct: 104 EGSPL-VVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 158
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N + D+ +KVADFGL++ + + T + ++ A E + +++ TK
Sbjct: 159 LAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 336 VDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIED 392
DV+SF ++L E M G PP+P ++ + R P P Y E++
Sbjct: 218 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLK 272
Query: 393 CWSEEPFRRPTFRQILMRLDDI 414
CW + RP+F +++ R+ I
Sbjct: 273 CWHPKAEMRPSFSELVSRISAI 294
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 128/262 (48%), Gaps = 20/262 (7%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ GT + AVK+L TD +V F+ E +++ HPNV+ LG +S
Sbjct: 44 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 101
Query: 220 --TPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRD 275
+P+ +V Y+ GDLR +++ + PT+ + F L +A+GM +L + +HRD
Sbjct: 102 EGSPL-VVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 156
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N + D+ +KVADFGL++ + + T + ++ A E + +++ TK
Sbjct: 157 LAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 215
Query: 336 VDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIED 392
DV+SF ++L E M G PP+P ++ + R P P Y E++
Sbjct: 216 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLK 270
Query: 393 CWSEEPFRRPTFRQILMRLDDI 414
CW + RP+F +++ R+ I
Sbjct: 271 CWHPKAEMRPSFSELVSRISAI 292
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 128/262 (48%), Gaps = 20/262 (7%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ GT + AVK+L TD +V F+ E +++ HPNV+ LG +S
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 220 --TPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRD 275
+P+ +V Y+ GDLR +++ + PT+ + F L +A+GM +L + +HRD
Sbjct: 104 EGSPL-VVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 158
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
L N + D+ +KVADFGL++ + + T + ++ A E + +++ TK
Sbjct: 159 LAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 336 VDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIED 392
DV+SF ++L E M G PP+P ++ + R P P Y E++
Sbjct: 218 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLK 272
Query: 393 CWSEEPFRRPTFRQILMRLDDI 414
CW + RP+F +++ R+ I
Sbjct: 273 CWHPKAEMRPSFSELVSRISAI 294
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 142/310 (45%), Gaps = 64/310 (20%)
Query: 141 EVPEYEIDPKELDFSNSV------EITKGT-FRIASWRG-TQVAVKTLGEEVFTDEDKVK 192
E P++E K L ++ ++ K T F + G T VAVK L E E ++
Sbjct: 14 EDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE--LR 71
Query: 193 AFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLA--- 249
+ E +L+++ HP+V++ GA +Q P++++ EY G LR +L++ + P
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 250 ---------------------VKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
+ FA I++GM YL E + ++HRDL NIL +
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRK 188
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEE--TSWRYAAPEVYKNEEYDTKVDVFSFALILQ 346
+K++DFGLS+ + +ED V + ++ A E + Y T+ DV+SF ++L
Sbjct: 189 MKISDFGLSR-----DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLW 243
Query: 347 EMIE-GCPPFPTKQEKEVPKAYIAN--------ERPPFRAPTTHYAYGLRELIEDCWSEE 397
E++ G P+P +P + N ERP + + + L+ CW +E
Sbjct: 244 EIVTLGGNPYPG-----IPPERLFNLLKTGHRMERP------DNCSEEMYRLMLQCWKQE 292
Query: 398 PFRRPTFRQI 407
P +RP F I
Sbjct: 293 PDKRPVFADI 302
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 53/274 (19%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
+VAVK L DE + A + EL ++ + +H N+V LGA T P++++TEY G
Sbjct: 63 KVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 120
Query: 233 DLRAYLKQK--GALKPTLA---------------------VKFALDIARGMNYLHENRPE 269
DL +L++K L P+LA + F+ +A+GM +L
Sbjct: 121 DLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN-- 178
Query: 270 AIIHRDLEPSNILRDDSGHLKVADFGLSK-LLKFANTVKEDR---PVTCEETSWRYAAPE 325
IHRD+ N+L + K+ DFGL++ ++ +N + + PV ++ APE
Sbjct: 179 -CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-------KWMAPE 230
Query: 326 VYKNEEYDTKVDVFSFALILQEMIE-GCPPFP-----TKQEKEVPKAYIANERPPFRAPT 379
+ Y + DV+S+ ++L E+ G P+P +K K V Y +P F AP
Sbjct: 231 SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY-QMAQPAF-APK 288
Query: 380 THYAYGLRELIEDCWSEEPFRRPTFRQILMRLDD 413
Y+ +++ CW+ EP RPTF+QI L +
Sbjct: 289 NIYS-----IMQACWALEPTHRPTFQQICSFLQE 317
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 122/231 (52%), Gaps = 15/231 (6%)
Query: 140 REVPEYEIDPKEL-DFSNSVEITKGTF---RIASWRGTQ--VAVKTLGEEVFTDEDKVKA 193
R+ P +D +L DF+ + + KG+F +A +GT+ A+K L ++V +D V+
Sbjct: 6 RKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVEC 65
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTP-MMIVTEYLPKGDLRAYLKQKGALKPTLAVKF 252
+ E +L + P + L + Q+ + V EY+ GDL +++Q G K AV +
Sbjct: 66 TMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFY 125
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPV 312
A +I+ G+ +LH+ II+RDL+ N++ D GH+K+ADFG+ K +
Sbjct: 126 AAEISIGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCG 182
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEV 363
T + Y APE+ + Y VD +++ ++L EM+ G PPF + E E+
Sbjct: 183 TPD-----YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL 228
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 129/261 (49%), Gaps = 40/261 (15%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
+VAVK L DE + A + EL ++ + +H N+V LGA T P++++TEY G
Sbjct: 70 KVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 127
Query: 233 DLRAYLKQKGA----------LKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
DL +L++K L+ + F+ +A+GM +L IHRD+ N+L
Sbjct: 128 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVL 184
Query: 283 RDDSGHLKVADFGLSK-LLKFANTVKEDR---PVTCEETSWRYAAPEVYKNEEYDTKVDV 338
+ K+ DFGL++ ++ +N + + PV ++ APE + Y + DV
Sbjct: 185 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-------KWMAPESIFDCVYTVQSDV 237
Query: 339 FSFALILQEMIE-GCPPFP-----TKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIED 392
+S+ ++L E+ G P+P +K K V Y +P F AP Y+ +++
Sbjct: 238 WSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY-QMAQPAF-APKNIYS-----IMQA 290
Query: 393 CWSEEPFRRPTFRQILMRLDD 413
CW+ EP RPTF+QI L +
Sbjct: 291 CWALEPTHRPTFQQICSFLQE 311
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 129/261 (49%), Gaps = 40/261 (15%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
+VAVK L DE + A + EL ++ + +H N+V LGA T P++++TEY G
Sbjct: 78 KVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 233 DLRAYLKQKGA----------LKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
DL +L++K L+ + F+ +A+GM +L IHRD+ N+L
Sbjct: 136 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVL 192
Query: 283 RDDSGHLKVADFGLSK-LLKFANTVKEDR---PVTCEETSWRYAAPEVYKNEEYDTKVDV 338
+ K+ DFGL++ ++ +N + + PV ++ APE + Y + DV
Sbjct: 193 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-------KWMAPESIFDCVYTVQSDV 245
Query: 339 FSFALILQEMIE-GCPPFP-----TKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIED 392
+S+ ++L E+ G P+P +K K V Y +P F AP Y+ +++
Sbjct: 246 WSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY-QMAQPAF-APKNIYS-----IMQA 298
Query: 393 CWSEEPFRRPTFRQILMRLDD 413
CW+ EP RPTF+QI L +
Sbjct: 299 CWALEPTHRPTFQQICSFLQE 319
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 15/218 (6%)
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFA 253
I EL +L + P +V F GA + I E++ G L LK+ G + + K +
Sbjct: 54 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 113
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL--KFANTVKEDRP 311
+ + +G+ YL E I+HRD++PSNIL + G +K+ DFG+S L + AN R
Sbjct: 114 IAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTR- 170
Query: 312 VTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
Y +PE + Y + D++S L L EM G P P E+ YI NE
Sbjct: 171 --------SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLD-YIVNE 221
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILM 409
PP + P+ ++ ++ + C + P R +Q+++
Sbjct: 222 PPP-KLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMV 258
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 128/253 (50%), Gaps = 27/253 (10%)
Query: 163 GTFRIASWRGTQ--VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST 220
G ++A+ TQ VA+K + ++ D E++ L+ +RHP++++ +T T
Sbjct: 23 GKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT 82
Query: 221 PMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSN 280
+++V EY G+L Y+ +K + +F I + Y H ++ I+HRDL+P N
Sbjct: 83 DIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPEN 138
Query: 281 ILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEY-DTKVDVF 339
+L DD+ ++K+ADFGLS ++ N +K +C S YAAPEV + Y +VDV+
Sbjct: 139 LLLDDNLNVKIADFGLSNIMTDGNFLK----TSC--GSPNYAAPEVINGKLYAGPEVDVW 192
Query: 340 SFALILQEMIEGCPPF-----PTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCW 394
S ++L M+ G PF P +K Y+ P F +P G + LI
Sbjct: 193 SCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVM---PDFLSP------GAQSLIRRMI 243
Query: 395 SEEPFRRPTFRQI 407
+P +R T ++I
Sbjct: 244 VADPMQRITIQEI 256
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P+G++ L++ + ++
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 123 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLC-- 172
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 229
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 230 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 111/214 (51%), Gaps = 18/214 (8%)
Query: 159 EITKGTFRIASWRG----TQVAVKTLGEEV-FTDEDKVKAFIDELALLQKIRHPNVVQFL 213
++ +G F + ++G T VAVK L V T E+ + F E+ ++ K +H N+V+ L
Sbjct: 38 KMGEGGFGVV-YKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPT---LAVKFALDIARGMNYLHENRPEA 270
G + + +V Y+P G L L P + K A A G+N+LHEN
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH-- 154
Query: 271 IIHRDLEPSNILRDDSGHLKVADFGLSKLL-KFANTVKEDRPVTCEETSWRYAAPEVYKN 329
IHRD++ +NIL D++ K++DFGL++ KFA TV R V + Y APE +
Sbjct: 155 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIV----GTTAYMAPEALRG 209
Query: 330 EEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEV 363
E K D++SF ++L E+I G P +E ++
Sbjct: 210 -EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 242
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 22/271 (8%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAV--- 216
+ +G + +VAVKT+ + + + +++ F+ E A ++ HPNV++ LG
Sbjct: 50 VMEGNLKQEDGTSLKVAVKTMKLD-NSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108
Query: 217 -TQSTPM-MIVTEYLPKGDLRAYLK----QKGALKPTLA--VKFALDIARGMNYLHENRP 268
+Q P M++ ++ GDL YL + G L +KF +DIA GM YL NR
Sbjct: 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL-SNR- 166
Query: 269 EAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYK 328
+HRDL N + D + VADFGLSK + + ++ R + ++ A E
Sbjct: 167 -NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGR---IAKMPVKWIAIESLA 222
Query: 329 NEEYDTKVDVFSFALILQEM-IEGCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLR 387
+ Y +K DV++F + + E+ G P+P Q E+ + R + P L
Sbjct: 223 DRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHR--LKQPEDCLD-ELY 279
Query: 388 ELIEDCWSEEPFRRPTFRQILMRLDDISDQL 418
E++ CW +P RPTF + ++L+ + + L
Sbjct: 280 EIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 136/271 (50%), Gaps = 28/271 (10%)
Query: 147 IDPKELDFSNSVEITKGTFR-----IASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALL 201
+DP+EL F+ +I KG+F I + VA+K + ++ ED+++ E+ +L
Sbjct: 3 LDPEEL-FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVL 59
Query: 202 QKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMN 261
+ P V ++ G+ + T + I+ EYL G L + G L T +I +G++
Sbjct: 60 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLD 118
Query: 262 YLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRY 321
YLH E IHRD++ +N+L + G +K+ADFG++ L +K + V +
Sbjct: 119 YLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNXFVGTP----FW 170
Query: 322 AAPEVYKNEEYDTKVDVFSFALILQEMIEGCPP----FPTKQEKEVPKAYIANERPPFRA 377
APEV K YD+K D++S + E+ G PP P K +PK N P
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK----NNPPTLEG 226
Query: 378 PTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+Y+ L+E +E C ++EP RPT +++L
Sbjct: 227 ---NYSKPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 134/271 (49%), Gaps = 28/271 (10%)
Query: 147 IDPKELDFSNSVEITKGTFR-----IASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALL 201
+DP+EL F+ +I KG+F I + VA+K + ++ ED+++ E+ +L
Sbjct: 3 LDPEEL-FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVL 59
Query: 202 QKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMN 261
+ P V ++ G+ + T + I+ EYL G L + G L T +I +G++
Sbjct: 60 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLD 118
Query: 262 YLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRY 321
YLH E IHRD++ +N+L + G +K+ADFG++ L + R W
Sbjct: 119 YLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQL---TDTQIKRNTFVGTPFW-- 170
Query: 322 AAPEVYKNEEYDTKVDVFSFALILQEMIEGCPP----FPTKQEKEVPKAYIANERPPFRA 377
APEV K YD+K D++S + E+ G PP P K +PK N P
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK----NNPPTLEG 226
Query: 378 PTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+Y+ L+E +E C ++EP RPT +++L
Sbjct: 227 ---NYSKPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 30/272 (11%)
Query: 147 IDPKELDFSNSVEITKGTFRIASWRG----TQ--VAVKTLGEEVFTDEDKVKAFIDELAL 200
+DP+EL F+ +I KG+F ++G TQ VA+K + ++ ED+++ E+ +
Sbjct: 23 MDPEEL-FTKLEKIGKGSFG-EVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITV 78
Query: 201 LQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGM 260
L + P V ++ G+ + T + I+ EYL G L + G L T +I +G+
Sbjct: 79 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGL 137
Query: 261 NYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWR 320
+YLH E IHRD++ +N+L + G +K+ADFG++ L + R W
Sbjct: 138 DYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQL---TDTQIKRNTFVGTPFW- 190
Query: 321 YAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPP----FPTKQEKEVPKAYIANERPPFR 376
APEV K YD+K D++S + E+ G PP P K +PK N P
Sbjct: 191 -MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK----NNPPTLE 245
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+Y+ L+E +E C ++EP RPT +++L
Sbjct: 246 G---NYSKPLKEFVEACLNKEPSFRPTAKELL 274
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 111/214 (51%), Gaps = 18/214 (8%)
Query: 159 EITKGTFRIASWRG----TQVAVKTLGEEV-FTDEDKVKAFIDELALLQKIRHPNVVQFL 213
++ +G F + ++G T VAVK L V T E+ + F E+ ++ K +H N+V+ L
Sbjct: 38 KMGEGGFGVV-YKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPT---LAVKFALDIARGMNYLHENRPEA 270
G + + +V Y+P G L L P + K A A G+N+LHEN
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH-- 154
Query: 271 IIHRDLEPSNILRDDSGHLKVADFGLSKLL-KFANTVKEDRPVTCEETSWRYAAPEVYKN 329
IHRD++ +NIL D++ K++DFGL++ KFA TV R V + Y APE +
Sbjct: 155 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIV----GTTAYMAPEALRG 209
Query: 330 EEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEV 363
E K D++SF ++L E+I G P +E ++
Sbjct: 210 -EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 242
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 135/270 (50%), Gaps = 28/270 (10%)
Query: 148 DPKELDFSNSVEITKGTFR-----IASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQ 202
DP+EL F+ +I KG+F I + VA+K + ++ ED+++ E+ +L
Sbjct: 19 DPEEL-FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLS 75
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNY 262
+ P V ++ G+ + T + I+ EYL G L + G L T +I +G++Y
Sbjct: 76 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDY 134
Query: 263 LHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYA 322
LH E IHRD++ +N+L + G +K+ADFG++ L +K + V +
Sbjct: 135 LHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNXFVGTP----FWM 186
Query: 323 APEVYKNEEYDTKVDVFSFALILQEMIEGCPP----FPTKQEKEVPKAYIANERPPFRAP 378
APEV K YD+K D++S + E+ G PP P K +PK N P
Sbjct: 187 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK----NNPPTLEG- 241
Query: 379 TTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+Y+ L+E +E C ++EP RPT +++L
Sbjct: 242 --NYSKPLKEFVEACLNKEPSFRPTAKELL 269
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 116/239 (48%), Gaps = 17/239 (7%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VAV+ + + K F E+ +++ + HPN+V+ + + +V EY
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ YL G +K A I + Y H+ + I+HRDL+ N+L D ++K+
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKI 154
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDT-KVDVFSFALILQEMIE 350
ADFG S F N + E C S YAAPE+++ ++YD +VDV+S +IL ++
Sbjct: 155 ADFGFSNEFTFGNKLDE----FC--GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 351 GCPPFPTKQEKEVPKAYIANE-RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
G PF + KE+ + + + R PF T L++ P +R T QI+
Sbjct: 209 GSLPFDGQNLKELRERVLRGKYRIPFYMSTD-----CENLLKKFLILNPSKRGTLEQIM 262
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 147/288 (51%), Gaps = 25/288 (8%)
Query: 141 EVPEYEIDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELAL 200
E+P+ +I + S S GT W G VAVK L T + +++AF +E+ +
Sbjct: 8 EIPDGQITVGQRIGSGSF----GTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNEVGV 61
Query: 201 LQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIAR-- 258
L+K RH N++ F+G T+ + IVT++ L +L A + +K +DIAR
Sbjct: 62 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQT 117
Query: 259 --GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
GM+YLH ++IIHRDL+ +NI + +K+ DFGL+ + + + ++
Sbjct: 118 ARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS--- 171
Query: 317 TSWRYAAPEVYKNEE---YDTKVDVFSFALILQEMIEGCPPFPTKQEKE--VPKAYIANE 371
S + APEV + ++ Y + DV++F ++L E++ G P+ ++ + +
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 231
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
P ++ ++ L+ +C ++ RP+F +IL +++++ +LS
Sbjct: 232 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARELS 279
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 128/267 (47%), Gaps = 46/267 (17%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
+VAVK L DE + A + EL ++ + +H N+V LGA T P++++TEY G
Sbjct: 78 KVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 233 DLRAYLKQK----------------GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
DL +L++K L + F+ +A+GM +L IHRD+
Sbjct: 136 DLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKN---CIHRDV 192
Query: 277 EPSNILRDDSGHLKVADFGLSK-LLKFANTVKEDR---PVTCEETSWRYAAPEVYKNEEY 332
N+L + K+ DFGL++ ++ +N + + PV ++ APE + Y
Sbjct: 193 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-------KWMAPESIFDCVY 245
Query: 333 DTKVDVFSFALILQEMIE-GCPPFP-----TKQEKEVPKAYIANERPPFRAPTTHYAYGL 386
+ DV+S+ ++L E+ G P+P +K K V Y +P F AP Y+
Sbjct: 246 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY-QMAQPAF-APKNIYS--- 300
Query: 387 RELIEDCWSEEPFRRPTFRQILMRLDD 413
+++ CW+ EP RPTF+QI L +
Sbjct: 301 --IMQACWALEPTHRPTFQQICSFLQE 325
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 144/304 (47%), Gaps = 33/304 (10%)
Query: 129 PSTAPMHVQNA--REVPEYEIDPKELDFSNSV------EITKGTFRIASWRGTQVAVKTL 180
P+T ++ Q A +YEI + ++ + ++ +G + VA+KT
Sbjct: 15 PTTENLYFQGAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC 74
Query: 181 GEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK- 239
T + + F+ E +++ HP++V+ +G +T++ P+ I+ E G+LR++L+
Sbjct: 75 KN--CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV 131
Query: 240 QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKL 299
+K +L + +A ++ + YL R +HRD+ N+L + +K+ DFGLS+
Sbjct: 132 RKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY 188
Query: 300 LKFANTVKEDR---PVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQE-MIEGCPPF 355
++ + K + P+ ++ APE + + DV+ F + + E ++ G PF
Sbjct: 189 MEDSTYYKASKGKLPI-------KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 241
Query: 356 PTKQEKEVPKAYIANERPPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDD 413
+ +V ER P P T Y+ L+ CW+ +P RRP F ++ +L
Sbjct: 242 QGVKNNDVIGRIENGERLPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLST 296
Query: 414 ISDQ 417
I ++
Sbjct: 297 ILEE 300
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 130/278 (46%), Gaps = 52/278 (18%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST--PMMIVTEYL 229
G VAVK L + E+ ++ F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 37 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 93
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR YL K K + +++ I +GM YL R IHRDL NIL ++
Sbjct: 94 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 150
Query: 289 LKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALIL 345
+K+ DFGL+K+L K VKE E+ + APE ++ DV+SF ++L
Sbjct: 151 VKIGDFGLTKVLPQDKEXXKVKEP-----GESPIFWYAPESLTESKFSVASDVWSFGVVL 205
Query: 346 QEMIEGCPPFPTKQEKEVPKA----YIANERP--------------------PFRAPTTH 381
E+ F ++ + P A I N++ P P
Sbjct: 206 YEL------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI 259
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
Y ++ +CW+ +RP+FR + +R+D I DQ++
Sbjct: 260 YM-----IMTECWNNNVNQRPSFRDLALRVDQIRDQMA 292
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 37/263 (14%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQ-STPMMIVTEYLPKG 232
VAVK L E E + A + EL +L I H NVV LGA T+ P+M++TE+ G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 233 DLRAYLKQK----------------GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
+L YL+ K L + ++ +A+GM +L + IHRDL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 277 EPSNILRDDSGHLKVADFGLSK-LLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
NIL + +K+ DFGL++ + K + V++ ++ APE + Y +
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA----RLPLKWMAPETIFDRVYTIQ 221
Query: 336 VDVFSFALILQEMIE-GCPPFP-TKQEKEVPKAYIANERPPFRAP--TTHYAYGLRELIE 391
DV+SF ++L E+ G P+P K ++E + R RAP TT Y + +
Sbjct: 222 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMY---QTML 276
Query: 392 DCWSEEPFRRPTFRQILMRLDDI 414
DCW EP +RPTF +++ L ++
Sbjct: 277 DCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 17/221 (7%)
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFA 253
I EL +L + P +V F GA + I E++ G L LK+ G + + K +
Sbjct: 70 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 129
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL--KFANTVKEDRP 311
+ + +G+ YL E I+HRD++PSNIL + G +K+ DFG+S L AN+ R
Sbjct: 130 IAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 187
Query: 312 VTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKA---YI 368
Y +PE + Y + D++S L L EM G P + YI
Sbjct: 188 ---------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYI 238
Query: 369 ANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILM 409
NE PP + P+ ++ ++ + C + P R +Q+++
Sbjct: 239 VNEPPP-KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 278
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 130/278 (46%), Gaps = 52/278 (18%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST--PMMIVTEYL 229
G VAVK L + E+ ++ F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 70 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 126
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR YL K K + +++ I +GM YL R IHRDL NIL ++
Sbjct: 127 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 183
Query: 289 LKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALIL 345
+K+ DFGL+K+L K VKE E+ + APE ++ DV+SF ++L
Sbjct: 184 VKIGDFGLTKVLPQDKEXXKVKEP-----GESPIFWYAPESLTESKFSVASDVWSFGVVL 238
Query: 346 QEMIEGCPPFPTKQEKEVPKA----YIANERP--------------------PFRAPTTH 381
E+ F ++ + P A I N++ P P
Sbjct: 239 YEL------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI 292
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
Y ++ +CW+ +RP+FR + +R+D I DQ++
Sbjct: 293 YM-----IMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 112/214 (52%), Gaps = 13/214 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGAL-KPTLAVKFAL 254
E+A+L ++HPN+VQ+ + ++ + IV +Y GDL + QKG L + + + +
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I + ++H+ + I+HRD++ NI G +++ DFG++++L +TV+ R C
Sbjct: 133 QICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLN--STVELAR--AC 185
Query: 315 EETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPP 374
T + Y +PE+ +N+ Y+ K D+++ +L E+ F K + I+ PP
Sbjct: 186 IGTPY-YLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPP 244
Query: 375 FRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ HY+Y LR L+ + P RP+ IL
Sbjct: 245 V---SLHYSYDLRSLVSQLFKRNPRDRPSVNSIL 275
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 144/285 (50%), Gaps = 24/285 (8%)
Query: 145 YEIDPKELDFSNSV-EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQK 203
+EI+ E+ S + + GT W G VAVK L + V ++ +AF +E+A+L+K
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKIL-KVVDPTPEQFQAFRNEVAVLRK 88
Query: 204 IRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDIARGMNY 262
RH N++ F+G +T+ + IVT++ L +L Q+ + + A A+GM+Y
Sbjct: 89 TRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDY 147
Query: 263 LHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKL-LKFANTVKEDRPVTCEETSWRY 321
LH + IIHRD++ +NI + +K+ DFGL+ + +++ + + ++P S +
Sbjct: 148 LH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT----GSVLW 200
Query: 322 AAPEVYK---NEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKE-----VPKAYIANERP 373
APEV + N + + DV+S+ ++L E++ G P+ ++ V + Y + P
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYAS---P 257
Query: 374 PFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQL 418
+ ++ L+ DC + RP F QIL ++ + L
Sbjct: 258 DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 37/263 (14%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQ-STPMMIVTEYLPKG 232
VAVK L E E + A + EL +L I H NVV LGA T+ P+M++TE+ G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 233 DLRAYLKQK----------------GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
+L YL+ K L + ++ +A+GM +L + IHRDL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 277 EPSNILRDDSGHLKVADFGLSK-LLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
NIL + +K+ DFGL++ + K + V++ ++ APE + Y +
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA----RLPLKWMAPETIFDRVYTIQ 221
Query: 336 VDVFSFALILQEMIE-GCPPFP-TKQEKEVPKAYIANERPPFRAP--TTHYAYGLRELIE 391
DV+SF ++L E+ G P+P K ++E + R RAP TT Y + +
Sbjct: 222 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMY---QTML 276
Query: 392 DCWSEEPFRRPTFRQILMRLDDI 414
DCW EP +RPTF +++ L ++
Sbjct: 277 DCWHGEPSQRPTFSELVEHLGNL 299
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 95/184 (51%), Gaps = 11/184 (5%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L +E+ +V+ DE +L + HP +++ G + + ++ +Y+
Sbjct: 31 GRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG 90
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G+L + L++ +A +A ++ + YLH + II+RDL+P NIL D +GH+K+
Sbjct: 91 GELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKI 147
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA V + C Y APEV + Y+ +D +SF +++ EM+ G
Sbjct: 148 TDFG------FAKYVPDVTYXLCGTPD--YIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
Query: 352 CPPF 355
PF
Sbjct: 200 YTPF 203
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 37/263 (14%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQ-STPMMIVTEYLPKG 232
VAVK L E E + A + EL +L I H NVV LGA T+ P+M++TE+ G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 233 DLRAYLKQK----------------GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
+L YL+ K L + ++ +A+GM +L + IHRDL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 277 EPSNILRDDSGHLKVADFGLSK-LLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
NIL + +K+ DFGL++ + K + V++ ++ APE + Y +
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA----RLPLKWMAPETIFDRVYTIQ 221
Query: 336 VDVFSFALILQEMIE-GCPPFP-TKQEKEVPKAYIANERPPFRAP--TTHYAYGLRELIE 391
DV+SF ++L E+ G P+P K ++E + R RAP TT Y + +
Sbjct: 222 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMY---QTML 276
Query: 392 DCWSEEPFRRPTFRQILMRLDDI 414
DCW EP +RPTF +++ L ++
Sbjct: 277 DCWHGEPSQRPTFSELVEHLGNL 299
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 115/239 (48%), Gaps = 17/239 (7%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VAVK + + K F E+ +++ + HPN+V+ + + +V EY
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ YL G +K A I + Y H+ + I+HRDL+ N+L D ++K+
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKI 154
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDT-KVDVFSFALILQEMIE 350
ADFG S F N + C S YAAPE+++ ++YD +VDV+S +IL ++
Sbjct: 155 ADFGFSNEFTFGNKLD----TFC--GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 351 GCPPFPTKQEKEVPKAYIANE-RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
G PF + KE+ + + + R PF T L++ P +R T QI+
Sbjct: 209 GSLPFDGQNLKELRERVLRGKYRIPFYMSTD-----CENLLKKFLILNPSKRGTLEQIM 262
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 119/239 (49%), Gaps = 29/239 (12%)
Query: 189 DKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG-ALKPT 247
+K + F E+ ++ + HPN+V+ G + P +V E++P GDL L K +K +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 248 LAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILR---DDSGHL--KVADFGLSKLLKF 302
+ ++ LDIA G+ Y+ P I+HRDL NI D++ + KVADFGLS+
Sbjct: 123 VKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---- 177
Query: 303 ANTVKEDRPVTCEETSWRYAAPEVYKNEE--YDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ V+ ++++ APE EE Y K D +SFA+IL ++ G PF
Sbjct: 178 ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY 233
Query: 361 KEVPKAYIANE---RP--PFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
++ + E RP P P LR +IE CWS +P +RP F I+ L ++
Sbjct: 234 GKIKFINMIREEGLRPTIPEDCPPR-----LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 115/239 (48%), Gaps = 17/239 (7%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VAVK + + K F E+ +++ + HPN+V+ + + +V EY
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ YL G +K A I + Y H+ + I+HRDL+ N+L D ++K+
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKI 154
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDT-KVDVFSFALILQEMIE 350
ADFG S F N + C S YAAPE+++ ++YD +VDV+S +IL ++
Sbjct: 155 ADFGFSNEFTFGNKLD----TFC--GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 351 GCPPFPTKQEKEVPKAYIANE-RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
G PF + KE+ + + + R PF T L++ P +R T QI+
Sbjct: 209 GSLPFDGQNLKELRERVLRGKYRIPFYMSTD-----CENLLKKFLILNPSKRGTLEQIM 262
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 146/288 (50%), Gaps = 25/288 (8%)
Query: 141 EVPEYEIDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELAL 200
E+P+ +I + S S GT W G VAVK L T + +++AF +E+ +
Sbjct: 20 EIPDGQITVGQRIGSGSF----GTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNEVGV 73
Query: 201 LQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIAR-- 258
L+K RH N++ F+G T+ + IVT++ L +L A + +K +DIAR
Sbjct: 74 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQT 129
Query: 259 --GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
GM+YLH ++IIHRDL+ +NI + +K+ DFGL+ + + ++
Sbjct: 130 ARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS--- 183
Query: 317 TSWRYAAPEVYKNEE---YDTKVDVFSFALILQEMIEGCPPFPTKQEKE--VPKAYIANE 371
S + APEV + ++ Y + DV++F ++L E++ G P+ ++ + +
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
P ++ ++ L+ +C ++ RP+F +IL +++++ +LS
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARELS 291
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 115/239 (48%), Gaps = 17/239 (7%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VAVK + + K F E+ +++ + HPN+V+ + + +V EY
Sbjct: 32 GKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 90
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ YL G +K A I + Y H+ + I+HRDL+ N+L D ++K+
Sbjct: 91 GEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKI 147
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDT-KVDVFSFALILQEMIE 350
ADFG S F N + C S YAAPE+++ ++YD +VDV+S +IL ++
Sbjct: 148 ADFGFSNEFTFGNKLD----TFC--GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 201
Query: 351 GCPPFPTKQEKEVPKAYIANE-RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
G PF + KE+ + + + R PF T L++ P +R T QI+
Sbjct: 202 GSLPFDGQNLKELRERVLRGKYRIPFYMSTD-----CENLLKKFLILNPSKRGTLEQIM 255
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
GD+ ++L++ G A +A I YLH +I+RDL+P N+L D G++KV
Sbjct: 126 GDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
ADFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 ADFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 129/261 (49%), Gaps = 35/261 (13%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQ-STPMMIVTEYLPKG 232
VAVK L E E + A + EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 62 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 233 DLRAYLKQKG----ALKP--------TL--AVKFALDIARGMNYLHENRPEAIIHRDLEP 278
+L YL+ K KP TL + ++ +A+GM +L + IHRDL
Sbjct: 120 NLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRK---XIHRDLAA 176
Query: 279 SNILRDDSGHLKVADFGLSK-LLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVD 337
NIL + +K+ DFGL++ + K + V++ ++ APE + Y + D
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGD----ARLPLKWMAPETIFDRVYTIQSD 232
Query: 338 VFSFALILQEMIE-GCPPFP-TKQEKEVPKAYIANERPPFRAP--TTHYAYGLRELIEDC 393
V+SF ++L E+ G P+P K ++E + R RAP TT Y + + DC
Sbjct: 233 VWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMY---QTMLDC 287
Query: 394 WSEEPFRRPTFRQILMRLDDI 414
W EP +RPTF +++ L ++
Sbjct: 288 WHGEPSQRPTFSELVEHLGNL 308
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 126/259 (48%), Gaps = 33/259 (12%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQ-STPMMIVTEYLPKG 232
VAVK L E E + A + EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 233 DLRAYLKQK------------GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSN 280
+L YL+ K L + ++ +A+GM +L + IHRDL N
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRK---XIHRDLAARN 174
Query: 281 ILRDDSGHLKVADFGLSK-LLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVF 339
IL + +K+ DFGL++ + K + V++ ++ APE + Y + DV+
Sbjct: 175 ILLSEKNVVKIXDFGLARDIYKDPDYVRKGD----ARLPLKWMAPETIFDRVYTIQSDVW 230
Query: 340 SFALILQEMIE-GCPPFP-TKQEKEVPKAYIANERPPFRAP--TTHYAYGLRELIEDCWS 395
SF ++L E+ G P+P K ++E + R RAP TT Y + + DCW
Sbjct: 231 SFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTR--MRAPDYTTPEMY---QTMLDCWH 285
Query: 396 EEPFRRPTFRQILMRLDDI 414
EP +RPTF +++ L ++
Sbjct: 286 GEPSQRPTFSELVEHLGNL 304
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
GD+ ++L++ G A +A I YLH +I+RDL+P N+L D G++KV
Sbjct: 126 GDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
ADFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 ADFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 126/259 (48%), Gaps = 33/259 (12%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQ-STPMMIVTEYLPKG 232
VAVK L E E + A + EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 233 DLRAYLKQK------------GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSN 280
+L YL+ K L + ++ +A+GM +L + IHRDL N
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRK---XIHRDLAARN 174
Query: 281 ILRDDSGHLKVADFGLSK-LLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVF 339
IL + +K+ DFGL++ + K + V++ ++ APE + Y + DV+
Sbjct: 175 ILLSEKNVVKICDFGLARDIYKDPDYVRKGD----ARLPLKWMAPETIFDRVYTIQSDVW 230
Query: 340 SFALILQEMIE-GCPPFP-TKQEKEVPKAYIANERPPFRAP--TTHYAYGLRELIEDCWS 395
SF ++L E+ G P+P K ++E + R RAP TT Y + + DCW
Sbjct: 231 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMY---QTMLDCWH 285
Query: 396 EEPFRRPTFRQILMRLDDI 414
EP +RPTF +++ L ++
Sbjct: 286 GEPSQRPTFSELVEHLGNL 304
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 123 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLC-- 172
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 229
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 230 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRAALC-- 170
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 227
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 228 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 121
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 122 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLC-- 171
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 228
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 229 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLC-- 170
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 227
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 228 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 52/278 (18%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST--PMMIVTEYL 229
G VAVK L + E+ ++ F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 57 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR YL K K + +++ I +GM YL R IHRDL NIL ++
Sbjct: 114 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 170
Query: 289 LKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALIL 345
+K+ DFGL+K+L K VKE E+ + APE ++ DV+SF ++L
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEP-----GESPIFWYAPESLTESKFSVASDVWSFGVVL 225
Query: 346 QEMIEGCPPFPTKQEKEVPKA----YIANERP--------------------PFRAPTTH 381
E+ F ++ + P A I N++ P P
Sbjct: 226 YEL------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI 279
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
Y ++ +CW+ +RP+FR + +R+D I D ++
Sbjct: 280 YM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNMA 312
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 134
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 135 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLC-- 184
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 241
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 242 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 272
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 110/214 (51%), Gaps = 18/214 (8%)
Query: 159 EITKGTFRIASWRG----TQVAVKTLGEEV-FTDEDKVKAFIDELALLQKIRHPNVVQFL 213
++ +G F + ++G T VAVK L V T E+ + F E+ ++ K +H N+V+ L
Sbjct: 32 KMGEGGFGVV-YKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPT---LAVKFALDIARGMNYLHENRPEA 270
G + + +V Y+P G L L P + K A A G+N+LHEN
Sbjct: 91 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH-- 148
Query: 271 IIHRDLEPSNILRDDSGHLKVADFGLSKLL-KFANTVKEDRPVTCEETSWRYAAPEVYKN 329
IHRD++ +NIL D++ K++DFGL++ KFA V R V + Y APE +
Sbjct: 149 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIV----GTTAYMAPEALRG 203
Query: 330 EEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEV 363
E K D++SF ++L E+I G P +E ++
Sbjct: 204 -EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 236
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 115/239 (48%), Gaps = 17/239 (7%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VAV+ + + K F E+ +++ + HPN+V+ + + +V EY
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ YL G +K A I + Y H+ + I+HRDL+ N+L D ++K+
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKI 154
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDT-KVDVFSFALILQEMIE 350
ADFG S F N + C S YAAPE+++ ++YD +VDV+S +IL ++
Sbjct: 155 ADFGFSNEFTFGNKLD----TFC--GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 351 GCPPFPTKQEKEVPKAYIANE-RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
G PF + KE+ + + + R PF T L++ P +R T QI+
Sbjct: 209 GSLPFDGQNLKELRERVLRGKYRIPFYMSTD-----CENLLKKFLILNPSKRGTLEQIM 262
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 52/278 (18%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST--PMMIVTEYL 229
G VAVK L + E+ ++ F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 46 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 102
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR YL K K + +++ I +GM YL R IHRDL NIL ++
Sbjct: 103 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 159
Query: 289 LKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALIL 345
+K+ DFGL+K+L K VKE E+ + APE ++ DV+SF ++L
Sbjct: 160 VKIGDFGLTKVLPQDKEXXKVKEP-----GESPIFWYAPESLTESKFSVASDVWSFGVVL 214
Query: 346 QEMIEGCPPFPTKQEKEVPKA----YIANERP--------------------PFRAPTTH 381
E+ F ++ + P A I N++ P P
Sbjct: 215 YEL------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI 268
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
Y ++ +CW+ +RP+FR + +R+D I D ++
Sbjct: 269 YM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNMA 301
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLC-- 167
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 224
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 225 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 135/271 (49%), Gaps = 28/271 (10%)
Query: 147 IDPKELDFSNSVEITKGTFR-----IASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALL 201
+DP+EL F+ I KG+F I + VA+K + ++ ED+++ E+ +L
Sbjct: 15 VDPEEL-FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKII--DLEEAEDEIEDIQQEITVL 71
Query: 202 QKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMN 261
+ P + ++ G+ +ST + I+ EYL G LK G L+ T +I +G++
Sbjct: 72 SQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLD 130
Query: 262 YLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRY 321
YLH R IHRD++ +N+L + G +K+ADFG++ L +K + V +
Sbjct: 131 YLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLT-DTQIKRNXFVGTP----FW 182
Query: 322 AAPEVYKNEEYDTKVDVFSFALILQEMIEGCPP----FPTKQEKEVPKAYIANERPPFRA 377
APEV K YD K D++S + E+ +G PP P + +PK N P
Sbjct: 183 MAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPK----NSPPTLEG 238
Query: 378 PTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
++ +E +E C +++P RPT +++L
Sbjct: 239 ---QHSKPFKEFVEACLNKDPRFRPTAKELL 266
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 36/262 (13%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQ-STPMMIVTEYLPKG 232
VAVK L E E + A + EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 61 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 118
Query: 233 DLRAYLKQK---------------GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLE 277
+L YL+ K L + ++ +A+GM +L + IHRDL
Sbjct: 119 NLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLA 175
Query: 278 PSNILRDDSGHLKVADFGLSK-LLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKV 336
NIL + +K+ DFGL++ + K + V++ ++ APE + Y +
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD----ARLPLKWMAPETIFDRVYTIQS 231
Query: 337 DVFSFALILQEMIE-GCPPFP-TKQEKEVPKAYIANERPPFRAP--TTHYAYGLRELIED 392
DV+SF ++L E+ G P+P K ++E + R RAP TT Y + + D
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMY---QTMLD 286
Query: 393 CWSEEPFRRPTFRQILMRLDDI 414
CW EP +RPTF +++ L ++
Sbjct: 287 CWHGEPSQRPTFSELVEHLGNL 308
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLC-- 170
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE---TYKRISRVEFT 227
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 228 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 37/263 (14%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQ-STPMMIVTEYLPKG 232
VAVK L E E + A + EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 233 DLRAYLKQK----------------GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
+L YL+ K L + ++ +A+GM +L + IHRDL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 277 EPSNILRDDSGHLKVADFGLSK-LLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
NIL + +K+ DFGL++ + K + V++ ++ APE + Y +
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA----RLPLKWMAPETIFDRVYTIQ 221
Query: 336 VDVFSFALILQEMIE-GCPPFP-TKQEKEVPKAYIANERPPFRAP--TTHYAYGLRELIE 391
DV+SF ++L E+ G P+P K ++E + R RAP TT Y + +
Sbjct: 222 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMY---QTML 276
Query: 392 DCWSEEPFRRPTFRQILMRLDDI 414
DCW EP +RPTF +++ L ++
Sbjct: 277 DCWHGEPSQRPTFSELVEHLGNL 299
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 17/239 (7%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VAVK + + K F E+ +++ + HPN+V+ + + +V EY
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ YL G +K A I + Y H+ + I+HRDL+ N+L D ++K+
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKI 154
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDT-KVDVFSFALILQEMIE 350
ADFG S F N + C YAAPE+++ ++YD +VDV+S +IL ++
Sbjct: 155 ADFGFSNEFTFGNKLD----AFCGAPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 351 GCPPFPTKQEKEVPKAYIANE-RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
G PF + KE+ + + + R PF T L++ P +R T QI+
Sbjct: 209 GSLPFDGQNLKELRERVLRGKYRIPFYMSTD-----CENLLKKFLILNPSKRGTLEQIM 262
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 52/278 (18%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST--PMMIVTEYL 229
G VAVK L + E+ ++ F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 39 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR YL K K + +++ I +GM YL R IHRDL NIL ++
Sbjct: 96 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 152
Query: 289 LKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALIL 345
+K+ DFGL+K+L K VKE E+ + APE ++ DV+SF ++L
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEP-----GESPIFWYAPESLTESKFSVASDVWSFGVVL 207
Query: 346 QEMIEGCPPFPTKQEKEVPKA----YIANERP--------------------PFRAPTTH 381
E+ F ++ + P A I N++ P P
Sbjct: 208 YEL------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI 261
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
Y ++ +CW+ +RP+FR + +R+D I D ++
Sbjct: 262 YM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 137/287 (47%), Gaps = 31/287 (10%)
Query: 144 EYEIDPKELDFSNSV------EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDE 197
+YEI + ++ + ++ +G + VA+KT T + + F+ E
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN--CTSDSVREKFLQE 61
Query: 198 LALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDI 256
+++ HP++V+ +G +T++ P+ I+ E G+LR++L+ +K +L + +A +
Sbjct: 62 ALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 120
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDR---PVT 313
+ + YL R +HRD+ N+L + +K+ DFGLS+ ++ + K + P+
Sbjct: 121 STALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI- 176
Query: 314 CEETSWRYAAPEVYKNEEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER 372
++ APE + + DV+ F + + E ++ G PF + +V ER
Sbjct: 177 ------KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER 230
Query: 373 PPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQ 417
P P T Y+ L+ CW+ +P RRP F ++ +L I ++
Sbjct: 231 LPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTILEE 272
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 52/278 (18%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST--PMMIVTEYL 229
G VAVK L + E+ ++ F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 42 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 98
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR YL K K + +++ I +GM YL R IHRDL NIL ++
Sbjct: 99 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 155
Query: 289 LKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALIL 345
+K+ DFGL+K+L K VKE E+ + APE ++ DV+SF ++L
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEP-----GESPIFWYAPESLTESKFSVASDVWSFGVVL 210
Query: 346 QEMIEGCPPFPTKQEKEVPKA----YIANERP--------------------PFRAPTTH 381
E+ F ++ + P A I N++ P P
Sbjct: 211 YEL------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI 264
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
Y ++ +CW+ +RP+FR + +R+D I D ++
Sbjct: 265 YM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 123 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLC-- 172
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 229
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 230 FP-DFVTEGARDLISRLLKHNPSQRPXLREVL 260
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRAALC-- 167
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 224
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 225 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 119 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRDTLC-- 168
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 225
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 226 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 52/278 (18%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST--PMMIVTEYL 229
G VAVK L + E+ ++ F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 39 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR YL K K + +++ I +GM YL R IHRDL NIL ++
Sbjct: 96 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 152
Query: 289 LKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALIL 345
+K+ DFGL+K+L K VKE E+ + APE ++ DV+SF ++L
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEP-----GESPIFWYAPESLTESKFSVASDVWSFGVVL 207
Query: 346 QEMIEGCPPFPTKQEKEVPKA----YIANERP--------------------PFRAPTTH 381
E+ F ++ + P A I N++ P P
Sbjct: 208 YEL------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI 261
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
Y ++ +CW+ +RP+FR + +R+D I D ++
Sbjct: 262 YM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 113/230 (49%), Gaps = 14/230 (6%)
Query: 140 REVPEYEIDPKELDFSNSVEITKGTFR---IASWRGTQ--VAVKTLGEEVFTDEDKVKA- 193
+E P +I K DF + KG+F +A ++ T A+K L ++V +D V+
Sbjct: 6 KERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT 65
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFA 253
+++ L HP + + V EYL GDL +++ + A +A
Sbjct: 66 MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA 125
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVT 313
+I G+ +LH + I++RDL+ NIL D GH+K+ADFG+ K + + T
Sbjct: 126 AEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGT 182
Query: 314 CEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEV 363
+ Y APE+ ++Y+ VD +SF ++L EM+ G PF + E+E+
Sbjct: 183 PD-----YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 227
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 116
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 117 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLC-- 166
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 167 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE---TYKRISRVEFT 223
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 224 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 254
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 52/278 (18%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST--PMMIVTEYL 229
G VAVK L + E+ ++ F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 44 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 100
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR YL K K + +++ I +GM YL R IHRDL NIL ++
Sbjct: 101 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 157
Query: 289 LKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALIL 345
+K+ DFGL+K+L K VKE E+ + APE ++ DV+SF ++L
Sbjct: 158 VKIGDFGLTKVLPQDKEXXKVKEP-----GESPIFWYAPESLTESKFSVASDVWSFGVVL 212
Query: 346 QEMIEGCPPFPTKQEKEVPKA----YIANERP--------------------PFRAPTTH 381
E+ F ++ + P A I N++ P P
Sbjct: 213 YEL------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI 266
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
Y ++ +CW+ +RP+FR + +R+D I D ++
Sbjct: 267 YM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNMA 299
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 34/258 (13%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ--STPMMIVTEYL 229
G QVAVK+L E + + + E+ +L+ + H N+V++ G T+ + ++ E+L
Sbjct: 50 GEQVAVKSLKPE--SGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G L+ YL K K + +K+A+ I +GM+YL + +HRDL N+L +
Sbjct: 108 PSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQ 164
Query: 289 LKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALIL 345
+K+ DFGL+K + K TVK+DR ++ + APE ++ DV+SF + L
Sbjct: 165 VKIGDFGLTKAIETDKEXXTVKDDR-----DSPVFWYAPECLMQSKFYIASDVWSFGVTL 219
Query: 346 QEMIEGC----PPF--------PTKQEKEVPK---AYIANERPPFRAPTTHYAYGLRELI 390
E++ C P PT + V + +R P Y +L+
Sbjct: 220 HELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVY---QLM 276
Query: 391 EDCWSEEPFRRPTFRQIL 408
CW +P R +F+ ++
Sbjct: 277 RKCWEFQPSNRTSFQNLI 294
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 52/278 (18%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST--PMMIVTEYL 229
G VAVK L + E+ ++ F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 45 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 101
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR YL K K + +++ I +GM YL R IHRDL NIL ++
Sbjct: 102 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 158
Query: 289 LKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALIL 345
+K+ DFGL+K+L K VKE E+ + APE ++ DV+SF ++L
Sbjct: 159 VKIGDFGLTKVLPQDKEXXKVKEP-----GESPIFWYAPESLTESKFSVASDVWSFGVVL 213
Query: 346 QEMIEGCPPFPTKQEKEVPKA----YIANERP--------------------PFRAPTTH 381
E+ F ++ + P A I N++ P P
Sbjct: 214 YEL------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI 267
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
Y ++ +CW+ +RP+FR + +R+D I D ++
Sbjct: 268 YM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNMA 300
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 52/278 (18%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST--PMMIVTEYL 229
G VAVK L + E+ ++ F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 38 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 94
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR YL K K + +++ I +GM YL R IHRDL NIL ++
Sbjct: 95 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 151
Query: 289 LKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALIL 345
+K+ DFGL+K+L K VKE E+ + APE ++ DV+SF ++L
Sbjct: 152 VKIGDFGLTKVLPQDKEXXKVKEP-----GESPIFWYAPESLTESKFSVASDVWSFGVVL 206
Query: 346 QEMIEGCPPFPTKQEKEVPKA----YIANERP--------------------PFRAPTTH 381
E+ F ++ + P A I N++ P P
Sbjct: 207 YEL------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI 260
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
Y ++ +CW+ +RP+FR + +R+D I D ++
Sbjct: 261 YM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNMA 293
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 119
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 120 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLC-- 169
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 226
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 227 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 114
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 115 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLC-- 164
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 165 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE---TYKRISRVEFT 221
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 222 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 252
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 34/258 (13%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ--STPMMIVTEYL 229
G QVAVK+L E + + + E+ +L+ + H N+V++ G T+ + ++ E+L
Sbjct: 38 GEQVAVKSLKPE--SGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G L+ YL K K + +K+A+ I +GM+YL + +HRDL N+L +
Sbjct: 96 PSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQ 152
Query: 289 LKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALIL 345
+K+ DFGL+K + K TVK+DR ++ + APE ++ DV+SF + L
Sbjct: 153 VKIGDFGLTKAIETDKEXXTVKDDR-----DSPVFWYAPECLMQSKFYIASDVWSFGVTL 207
Query: 346 QEMIEGC----PPF--------PTKQEKEVPK---AYIANERPPFRAPTTHYAYGLRELI 390
E++ C P PT + V + +R P Y +L+
Sbjct: 208 HELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVY---QLM 264
Query: 391 EDCWSEEPFRRPTFRQIL 408
CW +P R +F+ ++
Sbjct: 265 RKCWEFQPSNRTSFQNLI 282
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 114/230 (49%), Gaps = 14/230 (6%)
Query: 140 REVPEYEIDPKELDFSNSVEITKGTFR---IASWRGTQ--VAVKTLGEEVFTDEDKVKA- 193
+E P +I K DF + KG+F +A ++ T A+K L ++V +D V+
Sbjct: 5 KERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT 64
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFA 253
+++ L HP + + V EYL GDL +++ + A +A
Sbjct: 65 MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA 124
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVT 313
+I G+ +LH + I++RDL+ NIL D GH+K+ADFG+ K N + + +
Sbjct: 125 AEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK----ENMLGDAKTNX 177
Query: 314 CEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEV 363
T Y APE+ ++Y+ VD +SF ++L EM+ G PF + E+E+
Sbjct: 178 FCGTP-DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 226
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTXLC-- 167
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE---TYKRISRVEFT 224
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 225 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLC-- 170
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE---TYKRISRVEFT 227
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 228 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 143
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 144 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLC-- 193
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 250
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 251 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 137/287 (47%), Gaps = 31/287 (10%)
Query: 144 EYEIDPKELDFSNSV------EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDE 197
+YEI + ++ + ++ +G + VA+KT T + + F+ E
Sbjct: 9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN--CTSDSVREKFLQE 66
Query: 198 LALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDI 256
+++ HP++V+ +G +T++ P+ I+ E G+LR++L+ +K +L + +A +
Sbjct: 67 ALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 125
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDR---PVT 313
+ + YL R +HRD+ N+L + +K+ DFGLS+ ++ + K + P+
Sbjct: 126 STALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI- 181
Query: 314 CEETSWRYAAPEVYKNEEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER 372
++ APE + + DV+ F + + E ++ G PF + +V ER
Sbjct: 182 ------KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER 235
Query: 373 PPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQ 417
P P T Y+ L+ CW+ +P RRP F ++ +L I ++
Sbjct: 236 LPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTILEE 277
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 128/277 (46%), Gaps = 52/277 (18%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST--PMMIVTEYL 229
G VAVK L + E+ ++ F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 57 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR YL K K + +++ I +GM YL R IHRDL NIL ++
Sbjct: 114 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 170
Query: 289 LKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALIL 345
+K+ DFGL+K+L K VKE E+ + APE ++ DV+SF ++L
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEP-----GESPIFWYAPESLTESKFSVASDVWSFGVVL 225
Query: 346 QEMIEGCPPFPTKQEKEVPKA----YIANERP--------------------PFRAPTTH 381
E+ F ++ + P A I N++ P P
Sbjct: 226 YEL------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI 279
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQL 418
Y ++ +CW+ +RP+FR + +R+D I D +
Sbjct: 280 YM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLC-- 167
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE---TYKRISRVEFT 224
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 225 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 52/278 (18%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST--PMMIVTEYL 229
G VAVK L + E+ ++ F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 43 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 99
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR YL K K + +++ I +GM YL R IHRDL NIL ++
Sbjct: 100 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 156
Query: 289 LKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALIL 345
+K+ DFGL+K+L K VKE E+ + APE ++ DV+SF ++L
Sbjct: 157 VKIGDFGLTKVLPQDKEXXKVKEP-----GESPIFWYAPESLTESKFSVASDVWSFGVVL 211
Query: 346 QEMIEGCPPFPTKQEKEVPKA----YIANERP--------------------PFRAPTTH 381
E+ F ++ + P A I N++ P P
Sbjct: 212 YEL------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI 265
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
Y ++ +CW+ +RP+FR + +R+D I D ++
Sbjct: 266 YM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNMA 298
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 37/263 (14%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQ-STPMMIVTEYLPKG 232
VAVK L E E + A + EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 233 DLRAYLKQK----------------GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
+L YL+ K L + ++ +A+GM +L + IHRDL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 174
Query: 277 EPSNILRDDSGHLKVADFGLSK-LLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
NIL + +K+ DFGL++ + K + V++ ++ APE + Y +
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD----ARLPLKWMAPETIFDRVYTIQ 230
Query: 336 VDVFSFALILQEMIE-GCPPFP-TKQEKEVPKAYIANERPPFRAP--TTHYAYGLRELIE 391
DV+SF ++L E+ G P+P K ++E + R RAP TT Y + +
Sbjct: 231 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMY---QTML 285
Query: 392 DCWSEEPFRRPTFRQILMRLDDI 414
DCW EP +RPTF +++ L ++
Sbjct: 286 DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 37/263 (14%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQ-STPMMIVTEYLPKG 232
VAVK L E E + A + EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 233 DLRAYLKQK----------------GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
+L YL+ K L + ++ +A+GM +L + IHRDL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 174
Query: 277 EPSNILRDDSGHLKVADFGLSK-LLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
NIL + +K+ DFGL++ + K + V++ ++ APE + Y +
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD----ARLPLKWMAPETIFDRVYTIQ 230
Query: 336 VDVFSFALILQEMIE-GCPPFP-TKQEKEVPKAYIANERPPFRAP--TTHYAYGLRELIE 391
DV+SF ++L E+ G P+P K ++E + R RAP TT Y + +
Sbjct: 231 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMY---QTML 285
Query: 392 DCWSEEPFRRPTFRQILMRLDDI 414
DCW EP +RPTF +++ L ++
Sbjct: 286 DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 137/287 (47%), Gaps = 31/287 (10%)
Query: 144 EYEIDPKELDFSNSV------EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDE 197
+YEI + ++ + ++ +G + VA+KT T + + F+ E
Sbjct: 7 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN--CTSDSVREKFLQE 64
Query: 198 LALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDI 256
+++ HP++V+ +G +T++ P+ I+ E G+LR++L+ +K +L + +A +
Sbjct: 65 ALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 123
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDR---PVT 313
+ + YL R +HRD+ N+L + +K+ DFGLS+ ++ + K + P+
Sbjct: 124 STALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI- 179
Query: 314 CEETSWRYAAPEVYKNEEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER 372
++ APE + + DV+ F + + E ++ G PF + +V ER
Sbjct: 180 ------KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER 233
Query: 373 PPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQ 417
P P T Y+ L+ CW+ +P RRP F ++ +L I ++
Sbjct: 234 LPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTILEE 275
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 37/263 (14%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQ-STPMMIVTEYLPKG 232
VAVK L E E + A + EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 97 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 233 DLRAYLKQK----------------GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
+L YL+ K L + ++ +A+GM +L + IHRDL
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 211
Query: 277 EPSNILRDDSGHLKVADFGLSK-LLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
NIL + +K+ DFGL++ + K + V++ ++ APE + Y +
Sbjct: 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD----ARLPLKWMAPETIFDRVYTIQ 267
Query: 336 VDVFSFALILQEMIE-GCPPFP-TKQEKEVPKAYIANERPPFRAP--TTHYAYGLRELIE 391
DV+SF ++L E+ G P+P K ++E + R RAP TT Y + +
Sbjct: 268 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMY---QTML 322
Query: 392 DCWSEEPFRRPTFRQILMRLDDI 414
DCW EP +RPTF +++ L ++
Sbjct: 323 DCWHGEPSQRPTFSELVEHLGNL 345
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 137/287 (47%), Gaps = 31/287 (10%)
Query: 144 EYEIDPKELDFSNSV------EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDE 197
+YEI + ++ + ++ +G + VA+KT T + + F+ E
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN--CTSDSVREKFLQE 61
Query: 198 LALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDI 256
+++ HP++V+ +G +T++ P+ I+ E G+LR++L+ +K +L + +A +
Sbjct: 62 ALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 120
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDR---PVT 313
+ + YL R +HRD+ N+L + +K+ DFGLS+ ++ + K + P+
Sbjct: 121 STALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI- 176
Query: 314 CEETSWRYAAPEVYKNEEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER 372
++ APE + + DV+ F + + E ++ G PF + +V ER
Sbjct: 177 ------KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER 230
Query: 373 PPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQ 417
P P T Y+ L+ CW+ +P RRP F ++ +L I ++
Sbjct: 231 LPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTILEE 272
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 37/263 (14%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQ-STPMMIVTEYLPKG 232
VAVK L E E + A + EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 62 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 233 DLRAYLKQK----------------GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
+L YL+ K L + ++ +A+GM +L + IHRDL
Sbjct: 120 NLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 176
Query: 277 EPSNILRDDSGHLKVADFGLSK-LLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
NIL + +K+ DFGL++ + K + V++ ++ APE + Y +
Sbjct: 177 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD----ARLPLKWMAPETIFDRVYTIQ 232
Query: 336 VDVFSFALILQEMIE-GCPPFP-TKQEKEVPKAYIANERPPFRAP--TTHYAYGLRELIE 391
DV+SF ++L E+ G P+P K ++E + R RAP TT Y + +
Sbjct: 233 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMY---QTML 287
Query: 392 DCWSEEPFRRPTFRQILMRLDDI 414
DCW EP +RPTF +++ L ++
Sbjct: 288 DCWHGEPSQRPTFSELVEHLGNL 310
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 13/200 (6%)
Query: 171 RGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLP 230
+G VA+K + + DE I E++LL+++ HPN+V + + + +V E++
Sbjct: 44 QGRIVALKRIRLDA-EDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME 102
Query: 231 KGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHL 289
K DL+ L + K L+ + + + RG+ + H++R I+HRDL+P N+L + G L
Sbjct: 103 K-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGAL 158
Query: 290 KVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYK-NEEYDTKVDVFSFALILQEM 348
K+ADFGL++ F V R T E + Y AP+V +++Y T VD++S I EM
Sbjct: 159 KLADFGLAR--AFGIPV---RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEM 213
Query: 349 IEGCPPFP-TKQEKEVPKAY 367
I G P FP + ++PK +
Sbjct: 214 ITGKPLFPGVTDDDQLPKIF 233
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 137/287 (47%), Gaps = 31/287 (10%)
Query: 144 EYEIDPKELDFSNSV------EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDE 197
+YEI + ++ + ++ +G + VA+KT T + + F+ E
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN--CTSDSVREKFLQE 58
Query: 198 LALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDI 256
+++ HP++V+ +G +T++ P+ I+ E G+LR++L+ +K +L + +A +
Sbjct: 59 ALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 117
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDR---PVT 313
+ + YL R +HRD+ N+L + +K+ DFGLS+ ++ + K + P+
Sbjct: 118 STALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI- 173
Query: 314 CEETSWRYAAPEVYKNEEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER 372
++ APE + + DV+ F + + E ++ G PF + +V ER
Sbjct: 174 ------KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER 227
Query: 373 PPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQ 417
P P T Y+ L+ CW+ +P RRP F ++ +L I ++
Sbjct: 228 LPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTILEE 269
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 137/287 (47%), Gaps = 31/287 (10%)
Query: 144 EYEIDPKELDFSNSV------EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDE 197
+YEI + ++ + ++ +G + VA+KT T + + F+ E
Sbjct: 6 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN--CTSDSVREKFLQE 63
Query: 198 LALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDI 256
+++ HP++V+ +G +T++ P+ I+ E G+LR++L+ +K +L + +A +
Sbjct: 64 ALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 122
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDR---PVT 313
+ + YL R +HRD+ N+L + +K+ DFGLS+ ++ + K + P+
Sbjct: 123 STALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI- 178
Query: 314 CEETSWRYAAPEVYKNEEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER 372
++ APE + + DV+ F + + E ++ G PF + +V ER
Sbjct: 179 ------KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER 232
Query: 373 PPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQ 417
P P T Y+ L+ CW+ +P RRP F ++ +L I ++
Sbjct: 233 LPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTILEE 274
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 137/287 (47%), Gaps = 31/287 (10%)
Query: 144 EYEIDPKELDFSNSV------EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDE 197
+YEI + ++ + ++ +G + VA+KT T + + F+ E
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN--CTSDSVREKFLQE 61
Query: 198 LALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDI 256
+++ HP++V+ +G +T++ P+ I+ E G+LR++L+ +K +L + +A +
Sbjct: 62 ALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 120
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDR---PVT 313
+ + YL R +HRD+ N+L + +K+ DFGLS+ ++ + K + P+
Sbjct: 121 STALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI- 176
Query: 314 CEETSWRYAAPEVYKNEEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER 372
++ APE + + DV+ F + + E ++ G PF + +V ER
Sbjct: 177 ------KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER 230
Query: 373 PPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQ 417
P P T Y+ L+ CW+ +P RRP F ++ +L I ++
Sbjct: 231 LPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTILEE 272
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P+G++ L++ + ++
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + ++ + T +
Sbjct: 123 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLD- 176
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 177 ----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 229
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 230 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 13/200 (6%)
Query: 171 RGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLP 230
+G VA+K + + DE I E++LL+++ HPN+V + + + +V E++
Sbjct: 44 QGRIVALKRIRLDA-EDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME 102
Query: 231 KGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHL 289
K DL+ L + K L+ + + + RG+ + H++R I+HRDL+P N+L + G L
Sbjct: 103 K-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGAL 158
Query: 290 KVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYK-NEEYDTKVDVFSFALILQEM 348
K+ADFGL++ F V R T E + Y AP+V +++Y T VD++S I EM
Sbjct: 159 KLADFGLAR--AFGIPV---RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEM 213
Query: 349 IEGCPPFP-TKQEKEVPKAY 367
I G P FP + ++PK +
Sbjct: 214 ITGKPLFPGVTDDDQLPKIF 233
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 37/263 (14%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQ-STPMMIVTEYLPKG 232
VAVK L E E + A + EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 233 DLRAYLKQK----------------GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDL 276
+L YL+ K L + ++ +A+GM +L + IHRDL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 174
Query: 277 EPSNILRDDSGHLKVADFGLSK-LLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
NIL + +K+ DFGL++ + K + V++ ++ APE + Y +
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD----ARLPLKWMAPETIFDRVYTIQ 230
Query: 336 VDVFSFALILQEMIE-GCPPFP-TKQEKEVPKAYIANERPPFRAP--TTHYAYGLRELIE 391
DV+SF ++L E+ G P+P K ++E + R RAP TT Y + +
Sbjct: 231 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMY---QTML 285
Query: 392 DCWSEEPFRRPTFRQILMRLDDI 414
DCW EP +RPTF +++ L ++
Sbjct: 286 DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 123 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLC-- 172
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 229
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 230 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + ++ ++D T +
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLD- 174
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 175 ----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE---TYKRISRVEFT 227
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 228 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 137/287 (47%), Gaps = 31/287 (10%)
Query: 144 EYEIDPKELDFSNSV------EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDE 197
+YEI + ++ + ++ +G + VA+KT T + + F+ E
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN--CTSDSVREKFLQE 61
Query: 198 LALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDI 256
+++ HP++V+ +G +T++ P+ I+ E G+LR++L+ +K +L + +A +
Sbjct: 62 ALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 120
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDR---PVT 313
+ + YL R +HRD+ N+L + +K+ DFGLS+ ++ + K + P+
Sbjct: 121 STALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI- 176
Query: 314 CEETSWRYAAPEVYKNEEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANER 372
++ APE + + DV+ F + + E ++ G PF + +V ER
Sbjct: 177 ------KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER 230
Query: 373 PPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQ 417
P P T Y+ L+ CW+ +P RRP F ++ +L I ++
Sbjct: 231 LPMPPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTILEE 272
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 118/239 (49%), Gaps = 29/239 (12%)
Query: 189 DKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG-ALKPT 247
+K + F E+ ++ + HPN+V+ G + P +V E++P GDL L K +K +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 248 LAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILR---DDSGHL--KVADFGLSKLLKF 302
+ ++ LDIA G+ Y+ P I+HRDL NI D++ + KVADFG S+
Sbjct: 123 VKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ---- 177
Query: 303 ANTVKEDRPVTCEETSWRYAAPEVYKNEE--YDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ V+ ++++ APE EE Y K D +SFA+IL ++ G PF
Sbjct: 178 ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY 233
Query: 361 KEVPKAYIANE---RP--PFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
++ + E RP P P LR +IE CWS +P +RP F I+ L ++
Sbjct: 234 GKIKFINMIREEGLRPTIPEDCPPR-----LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTELC-- 167
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 224
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 225 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 15/238 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VA+K + + K F E+ +++ + HPN+V+ + + ++ EY
Sbjct: 37 GREVAIKIIDKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 95
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ YL G +K A I + Y H+ R I+HRDL+ N+L D ++K+
Sbjct: 96 GEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKI 152
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDT-KVDVFSFALILQEMIE 350
ADFG S TV C S YAAPE+++ ++YD +VDV+S +IL ++
Sbjct: 153 ADFGFSNEF----TVGGKLDTFC--GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 206
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
G PF + KE+ + + R +R P + + L++ P +R T QI+
Sbjct: 207 GSLPFDGQNLKELRERVL---RGKYRIP-FYMSTDCENLLKRFLVLNPIKRGTLEQIM 260
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 129/288 (44%), Gaps = 49/288 (17%)
Query: 154 FSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQF 212
F VE T I S VAVK L E + A + EL +L + H N+V
Sbjct: 59 FGKVVEATAYGL-IKSDAAMTVAVKMLKPSAHLTERE--ALMSELKVLSYLGNHMNIVNL 115
Query: 213 LGAVTQSTPMMIVTEYLPKGDLRAYLKQK------GALKPTL------------AVKFAL 254
LGA T P +++TEY GDL +L++K P + + F+
Sbjct: 116 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY 175
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKF-ANTVKEDR--- 310
+A+GM +L IHRDL NIL K+ DFGL++ +K +N V +
Sbjct: 176 QVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARL 232
Query: 311 PVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFP-----TKQEKEVP 364
PV ++ APE N Y + DV+S+ + L E+ G P+P +K K +
Sbjct: 233 PV-------KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
Query: 365 KAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLD 412
+ + P AP Y ++++ CW +P +RPTF+QI+ ++
Sbjct: 286 EGF--RMLSPEHAPAEMY-----DIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 119 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLC-- 168
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 225
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 226 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 129/288 (44%), Gaps = 49/288 (17%)
Query: 154 FSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQF 212
F VE T I S VAVK L E + A + EL +L + H N+V
Sbjct: 36 FGKVVEATAYGL-IKSDAAMTVAVKMLKPSAHLTERE--ALMSELKVLSYLGNHMNIVNL 92
Query: 213 LGAVTQSTPMMIVTEYLPKGDLRAYLKQK------GALKPTL------------AVKFAL 254
LGA T P +++TEY GDL +L++K P + + F+
Sbjct: 93 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY 152
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKF-ANTVKEDR--- 310
+A+GM +L IHRDL NIL K+ DFGL++ +K +N V +
Sbjct: 153 QVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 209
Query: 311 PVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFP-----TKQEKEVP 364
PV ++ APE N Y + DV+S+ + L E+ G P+P +K K +
Sbjct: 210 PV-------KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 262
Query: 365 KAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLD 412
+ + P AP Y ++++ CW +P +RPTF+QI+ ++
Sbjct: 263 EGF--RMLSPEHAPAEMY-----DIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 52/278 (18%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST--PMMIVTEYL 229
G VAVK L + E+ ++ F E+ +L+ ++H N+V++ G + + ++ E+L
Sbjct: 42 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFL 98
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR YL K K + +++ I +GM YL R IHRDL NIL ++
Sbjct: 99 PYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 155
Query: 289 LKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALIL 345
+K+ DFGL+K+L K VKE E+ + APE ++ DV+SF ++L
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEP-----GESPIFWYAPESLTESKFSVASDVWSFGVVL 210
Query: 346 QEMIEGCPPFPTKQEKEVPKA----YIANERP--------------------PFRAPTTH 381
E+ F ++ + P A I N++ P P
Sbjct: 211 YEL------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI 264
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
Y ++ +CW+ +RP+FR + +R+D I D ++
Sbjct: 265 YM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLC-- 167
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 224
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 225 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 97/176 (55%), Gaps = 11/176 (6%)
Query: 187 DEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ-KGALK 245
DE I E+++L++++H N+V+ + +++V E+L + DL+ L +G L+
Sbjct: 40 DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLE 98
Query: 246 PTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANT 305
A F L + G+ Y H+ R ++HRDL+P N+L + G LK+ADFGL++ F
Sbjct: 99 SVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLAR--AFGIP 153
Query: 306 VKEDRPVTCEETSWRYAAPEVYK-NEEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
V R T E + Y AP+V +++Y T +D++S I EM+ G P FP E
Sbjct: 154 V---RKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSE 206
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 119
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+A+FG S + R C
Sbjct: 120 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS-----VHAPSSRRTTLC-- 169
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 226
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 227 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 118/239 (49%), Gaps = 29/239 (12%)
Query: 189 DKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG-ALKPT 247
+K + F E+ ++ + HPN+V+ G + P +V E++P GDL L K +K +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 248 LAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILR---DDSGHL--KVADFGLSKLLKF 302
+ ++ LDIA G+ Y+ P I+HRDL NI D++ + KVADF LS+
Sbjct: 123 VKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---- 177
Query: 303 ANTVKEDRPVTCEETSWRYAAPEVYKNEE--YDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ V+ ++++ APE EE Y K D +SFA+IL ++ G PF
Sbjct: 178 ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY 233
Query: 361 KEVPKAYIANE---RP--PFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
++ + E RP P P LR +IE CWS +P +RP F I+ L ++
Sbjct: 234 GKIKFINMIREEGLRPTIPEDCPPR-----LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLC-- 167
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE---TYKRISRVEFT 224
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 225 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 52/278 (18%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST--PMMIVTEYL 229
G VAVK L + E+ ++ F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 39 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR YL K K + +++ I +GM YL R IHRDL NIL ++
Sbjct: 96 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 152
Query: 289 LKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALIL 345
+K+ DFGL+K+L K VKE E+ + APE ++ DV+SF ++L
Sbjct: 153 VKIGDFGLTKVLPQDKEFFKVKEP-----GESPIFWYAPESLTESKFSVASDVWSFGVVL 207
Query: 346 QEMIEGCPPFPTKQEKEVPKA----YIANERP--------------------PFRAPTTH 381
E+ F ++ + P A I N++ P P
Sbjct: 208 YEL------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI 261
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
Y ++ +CW+ +RP+FR + +R+D I D ++
Sbjct: 262 YM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 121/260 (46%), Gaps = 19/260 (7%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G + VAVKT ++ D + F+ E +++ + HP++V+ +G + +
Sbjct: 39 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIMKNLDHPHIVKLIG-IIE 95
Query: 219 STPMMIVTEYLPKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLE 277
P I+ E P G+L YL + K +LK V ++L I + M YL +HRD+
Sbjct: 96 EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIA 152
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVD 337
NIL +K+ DFGLS+ ++ + K VT W +PE + T D
Sbjct: 153 VRNILVASPECVKLGDFGLSRYIEDEDYYKAS--VTRLPIKW--MSPESINFRRFTTASD 208
Query: 338 VFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCW 394
V+ FA+ + E++ G PF + K+V +R P P Y L+ CW
Sbjct: 209 VWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYT-----LMTRCW 263
Query: 395 SEEPFRRPTFRQILMRLDDI 414
+P RP F +++ L D+
Sbjct: 264 DYDPSDRPRFTELVCSLSDV 283
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 136/284 (47%), Gaps = 25/284 (8%)
Query: 144 EYEIDPKELDFSNSV------EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDE 197
+YEI + ++ + ++ +G + VA+KT T + + F+ E
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN--CTSDSVREKFLQE 441
Query: 198 LALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDI 256
+++ HP++V+ +G +T++ P+ I+ E G+LR++L+ +K +L + +A +
Sbjct: 442 ALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 500
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
+ + YL R +HRD+ N+L + +K+ DFGLS+ ++ + K + +
Sbjct: 501 STALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG----K 553
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANERPPF 375
++ APE + + DV+ F + + E ++ G PF + +V ER P
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 613
Query: 376 --RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQ 417
P T Y+ L+ CW+ +P RRP F ++ +L I ++
Sbjct: 614 PPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTILEE 652
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+A+FG S + R C
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS-----VHAPSSRRTTLC-- 170
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE---TYKRISRVEFT 227
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 228 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 97/176 (55%), Gaps = 11/176 (6%)
Query: 187 DEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ-KGALK 245
DE I E+++L++++H N+V+ + +++V E+L + DL+ L +G L+
Sbjct: 40 DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLE 98
Query: 246 PTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANT 305
A F L + G+ Y H+ R ++HRDL+P N+L + G LK+ADFGL++ F
Sbjct: 99 SVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLAR--AFGIP 153
Query: 306 VKEDRPVTCEETSWRYAAPEVYK-NEEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
V R T E + Y AP+V +++Y T +D++S I EM+ G P FP E
Sbjct: 154 V---RKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE 206
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 143
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + ++ ++D T +
Sbjct: 144 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLD- 197
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 198 ----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 250
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 251 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G ST + ++ EY P G + L++ + ++
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H + +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 118 ANALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRAALC-- 167
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF ++ Y R F
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDT---YKRISRVEFT 224
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 225 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 129/288 (44%), Gaps = 49/288 (17%)
Query: 154 FSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQF 212
F VE T I S VAVK L E + A + EL +L + H N+V
Sbjct: 54 FGKVVEATAYGL-IKSDAAMTVAVKMLKPSAHLTERE--ALMSELKVLSYLGNHMNIVNL 110
Query: 213 LGAVTQSTPMMIVTEYLPKGDLRAYLKQK------GALKPTL------------AVKFAL 254
LGA T P +++TEY GDL +L++K P + + F+
Sbjct: 111 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY 170
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKF-ANTVKEDR--- 310
+A+GM +L IHRDL NIL K+ DFGL++ +K +N V +
Sbjct: 171 QVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 227
Query: 311 PVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFP-----TKQEKEVP 364
PV ++ APE N Y + DV+S+ + L E+ G P+P +K K +
Sbjct: 228 PV-------KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 280
Query: 365 KAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLD 412
+ + P AP Y ++++ CW +P +RPTF+QI+ ++
Sbjct: 281 EGF--RMLSPEHAPAEMY-----DIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 129/288 (44%), Gaps = 49/288 (17%)
Query: 154 FSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQF 212
F VE T I S VAVK L E + A + EL +L + H N+V
Sbjct: 52 FGKVVEATAYGL-IKSDAAMTVAVKMLKPSAHLTERE--ALMSELKVLSYLGNHMNIVNL 108
Query: 213 LGAVTQSTPMMIVTEYLPKGDLRAYLKQK------GALKPTL------------AVKFAL 254
LGA T P +++TEY GDL +L++K P + + F+
Sbjct: 109 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY 168
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKF-ANTVKEDR--- 310
+A+GM +L IHRDL NIL K+ DFGL++ +K +N V +
Sbjct: 169 QVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 225
Query: 311 PVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFP-----TKQEKEVP 364
PV ++ APE N Y + DV+S+ + L E+ G P+P +K K +
Sbjct: 226 PV-------KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 278
Query: 365 KAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLD 412
+ + P AP Y ++++ CW +P +RPTF+QI+ ++
Sbjct: 279 EGF--RMLSPEHAPAEMY-----DIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 121/260 (46%), Gaps = 19/260 (7%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G + VAVKT ++ D + F+ E +++ + HP++V+ +G + +
Sbjct: 27 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIMKNLDHPHIVKLIG-IIE 83
Query: 219 STPMMIVTEYLPKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLE 277
P I+ E P G+L YL + K +LK V ++L I + M YL +HRD+
Sbjct: 84 EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIA 140
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVD 337
NIL +K+ DFGLS+ ++ + K VT W +PE + T D
Sbjct: 141 VRNILVASPECVKLGDFGLSRYIEDEDYYKAS--VTRLPIKW--MSPESINFRRFTTASD 196
Query: 338 VFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCW 394
V+ FA+ + E++ G PF + K+V +R P P Y L+ CW
Sbjct: 197 VWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYT-----LMTRCW 251
Query: 395 SEEPFRRPTFRQILMRLDDI 414
+P RP F +++ L D+
Sbjct: 252 DYDPSDRPRFTELVCSLSDV 271
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 129/288 (44%), Gaps = 49/288 (17%)
Query: 154 FSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQF 212
F VE T I S VAVK L E + A + EL +L + H N+V
Sbjct: 59 FGKVVEATAYGL-IKSDAAMTVAVKMLKPSAHLTERE--ALMSELKVLSYLGNHMNIVNL 115
Query: 213 LGAVTQSTPMMIVTEYLPKGDLRAYLKQK------GALKPTL------------AVKFAL 254
LGA T P +++TEY GDL +L++K P + + F+
Sbjct: 116 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY 175
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKF-ANTVKEDR--- 310
+A+GM +L IHRDL NIL K+ DFGL++ +K +N V +
Sbjct: 176 QVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 232
Query: 311 PVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFP-----TKQEKEVP 364
PV ++ APE N Y + DV+S+ + L E+ G P+P +K K +
Sbjct: 233 PV-------KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
Query: 365 KAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLD 412
+ + P AP Y ++++ CW +P +RPTF+QI+ ++
Sbjct: 286 EGF--RMLSPEHAPAEMY-----DIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 97/176 (55%), Gaps = 11/176 (6%)
Query: 187 DEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ-KGALK 245
DE I E+++L++++H N+V+ + +++V E+L + DL+ L +G L+
Sbjct: 40 DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLE 98
Query: 246 PTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANT 305
A F L + G+ Y H+ R ++HRDL+P N+L + G LK+ADFGL++ F
Sbjct: 99 SVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLAR--AFGIP 153
Query: 306 VKEDRPVTCEETSWRYAAPEVYK-NEEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
V R T E + Y AP+V +++Y T +D++S I EM+ G P FP E
Sbjct: 154 V---RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE 206
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG ++ R T
Sbjct: 119 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG------WSCHAPSSRRTTLSG 169
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
T Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 170 T-LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFT 225
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI P +RP R++L
Sbjct: 226 FP-DFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 136/284 (47%), Gaps = 25/284 (8%)
Query: 144 EYEIDPKELDFSNSV------EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDE 197
+YEI + ++ + ++ +G + VA+KT T + + F+ E
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN--CTSDSVREKFLQE 441
Query: 198 LALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDI 256
+++ HP++V+ +G +T++ P+ I+ E G+LR++L+ +K +L + +A +
Sbjct: 442 ALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 500
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
+ + YL R +HRD+ N+L + +K+ DFGLS+ ++ + K + +
Sbjct: 501 STALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG----K 553
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQE-MIEGCPPFPTKQEKEVPKAYIANERPPF 375
++ APE + + DV+ F + + E ++ G PF + +V ER P
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 613
Query: 376 --RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQ 417
P T Y+ L+ CW+ +P RRP F ++ +L I ++
Sbjct: 614 PPNCPPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTILEE 652
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 121/260 (46%), Gaps = 19/260 (7%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E+ +G + VAVKT ++ D + F+ E +++ + HP++V+ +G + +
Sbjct: 23 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIMKNLDHPHIVKLIG-IIE 79
Query: 219 STPMMIVTEYLPKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLE 277
P I+ E P G+L YL + K +LK V ++L I + M YL +HRD+
Sbjct: 80 EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIA 136
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVD 337
NIL +K+ DFGLS+ ++ + K VT W +PE + T D
Sbjct: 137 VRNILVASPECVKLGDFGLSRYIEDEDYYKAS--VTRLPIKW--MSPESINFRRFTTASD 192
Query: 338 VFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCW 394
V+ FA+ + E++ G PF + K+V +R P P Y L+ CW
Sbjct: 193 VWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYT-----LMTRCW 247
Query: 395 SEEPFRRPTFRQILMRLDDI 414
+P RP F +++ L D+
Sbjct: 248 DYDPSDRPRFTELVCSLSDV 267
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 145/294 (49%), Gaps = 39/294 (13%)
Query: 141 EVPEYEIDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELAL 200
E+P+ +I + S S GT W G VAVK L T + +++AF +E+ +
Sbjct: 32 EIPDGQITVGQRIGSGSF----GTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNEVGV 85
Query: 201 LQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIAR-- 258
L+K RH N++ F+G T+ + IVT++ L +L ++ + +DIAR
Sbjct: 86 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQT 141
Query: 259 --GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCE- 315
GM+YLH ++IIHRDL+ +NI + +K+ DFGL+ TVK + +
Sbjct: 142 AQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-------TVKSRWSGSHQF 191
Query: 316 ---ETSWRYAAPEVYKNEE---YDTKVDVFSFALILQEMIEGCPPFPTKQEKE-----VP 364
S + APEV + ++ Y + DV++F ++L E++ G P+ ++ V
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 251
Query: 365 KAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQL 418
+ Y++ P ++ ++ L+ +C ++ RP F QIL ++ ++ L
Sbjct: 252 RGYLS---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 302
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 114/222 (51%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G++KV
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
ADFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 ADFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 118/254 (46%), Gaps = 28/254 (11%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+KTL ++ + + F E L +++HPNVV LG VT+ P+ ++ Y GDL
Sbjct: 59 VAIKTLKDK--AEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 116
Query: 235 RAYLKQ----------------KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEP 278
+L K AL+P V IA GM YL + ++H+DL
Sbjct: 117 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLAT 173
Query: 279 SNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDV 338
N+L D ++K++D GL + + A+ K + R+ APE ++ D+
Sbjct: 174 RNVLVYDKLNVKISDLGLFREVYAADYYKL---LGNSLLPIRWMAPEAIMYGKFSIDSDI 230
Query: 339 FSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEE 397
+S+ ++L E+ G P+ ++V + + P + Y L +IE CW+E
Sbjct: 231 WSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYAL--MIE-CWNEF 287
Query: 398 PFRRPTFRQILMRL 411
P RRP F+ I RL
Sbjct: 288 PSRRPRFKDIHSRL 301
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 118/254 (46%), Gaps = 28/254 (11%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+KTL ++ + + F E L +++HPNVV LG VT+ P+ ++ Y GDL
Sbjct: 42 VAIKTLKDK--AEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 99
Query: 235 RAYLKQ----------------KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEP 278
+L K AL+P V IA GM YL + ++H+DL
Sbjct: 100 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLAT 156
Query: 279 SNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDV 338
N+L D ++K++D GL + + A+ K + R+ APE ++ D+
Sbjct: 157 RNVLVYDKLNVKISDLGLFREVYAADYYKL---LGNSLLPIRWMAPEAIMYGKFSIDSDI 213
Query: 339 FSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEE 397
+S+ ++L E+ G P+ ++V + + P + Y L +IE CW+E
Sbjct: 214 WSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYAL--MIE-CWNEF 270
Query: 398 PFRRPTFRQILMRL 411
P RRP F+ I RL
Sbjct: 271 PSRRPRFKDIHSRL 284
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 145/290 (50%), Gaps = 31/290 (10%)
Query: 141 EVPEYEIDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELAL 200
E+P+ +I + S S GT W G VAVK L T + +++AF +E+ +
Sbjct: 31 EIPDGQITVGQRIGSGSF----GTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNEVGV 84
Query: 201 LQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIAR-- 258
L+K RH N++ F+G T+ + IVT++ L +L ++ + +DIAR
Sbjct: 85 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQT 140
Query: 259 --GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
GM+YLH ++IIHRDL+ +NI + +K+ DFGL+ + + + ++
Sbjct: 141 AQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS--- 194
Query: 317 TSWRYAAPEVYKNEE---YDTKVDVFSFALILQEMIEGCPPFPTKQEKE-----VPKAYI 368
S + APEV + ++ Y + DV++F ++L E++ G P+ ++ V + Y+
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 254
Query: 369 ANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQL 418
+ P ++ ++ L+ +C ++ RP F QIL ++ ++ L
Sbjct: 255 S---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 301
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 121/261 (46%), Gaps = 23/261 (8%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS-----TPM-MIVT 226
+VAVK L ++ D ++ F+ E A +++ HP+V + +G +S P+ M++
Sbjct: 52 VKVAVKMLKADIIASSD-IEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVIL 110
Query: 227 EYLPKGDLRAYL------KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSN 280
++ GDL A+L + L V+F +DIA GM YL IHRDL N
Sbjct: 111 PFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARN 167
Query: 281 ILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFS 340
+ + + VADFGLS+ + + ++ + ++ A E + Y DV++
Sbjct: 168 CMLAEDMTVCVADFGLSRKIYSGDYYRQG---CASKLPVKWLALESLADNLYTVHSDVWA 224
Query: 341 FALILQE-MIEGCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPF 399
F + + E M G P+ + E+ I R Y +L+ CWS +P
Sbjct: 225 FGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVY---DLMYQCWSADPK 281
Query: 400 RRPTFRQILMRLDDISDQLSI 420
+RP+F + M L++I LS+
Sbjct: 282 QRPSFTCLRMELENILGHLSV 302
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 114/238 (47%), Gaps = 15/238 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VA+K + + K F E+ +++ + HPN+V+ + + ++ EY
Sbjct: 40 GREVAIKIIDKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 98
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ YL G +K A I + Y H+ R I+HRDL+ N+L D ++K+
Sbjct: 99 GEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKI 155
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDT-KVDVFSFALILQEMIE 350
ADFG S TV C YAAPE+++ ++YD +VDV+S +IL ++
Sbjct: 156 ADFGFSNEF----TVGGKLDAFCGAPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
G PF + KE+ + + R +R P + + L++ P +R T QI+
Sbjct: 210 GSLPFDGQNLKELRERVL---RGKYRIP-FYMSTDCENLLKRFLVLNPIKRGTLEQIM 263
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 119/250 (47%), Gaps = 16/250 (6%)
Query: 161 TKGTFRIASWR--GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
T G +I + G +VAVK L + D V E+ L+ RHP++++ ++
Sbjct: 23 TFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST 82
Query: 219 STPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEP 278
T +V EY+ G+L Y+ + G ++ A + I ++Y H + ++HRDL+P
Sbjct: 83 PTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKP 139
Query: 279 SNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEY-DTKVD 337
N+L D + K+ADFGLS ++ +++ +C S YAAPEV Y +VD
Sbjct: 140 ENVLLDAHMNAKIADFGLSNMMSDGEFLRD----SC--GSPNYAAPEVISGRLYAGPEVD 193
Query: 338 VFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEE 397
++S +IL ++ G PF ++ VP + F P + + L+ +
Sbjct: 194 IWSCGVILYALLCGTLPF---DDEHVPTLFKKIRGGVFYIP-EYLNRSVATLLMHMLQVD 249
Query: 398 PFRRPTFRQI 407
P +R T + I
Sbjct: 250 PLKRATIKDI 259
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 143/284 (50%), Gaps = 25/284 (8%)
Query: 141 EVPEYEIDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELAL 200
E+P+ +I + S S GT W G VAVK L T + +++AF +E+ +
Sbjct: 20 EIPDGQITVGQRIGSGSF----GTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNEVGV 73
Query: 201 LQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIAR-- 258
L+K RH N++ F+G T + + IVT++ L +L A + +K +DIAR
Sbjct: 74 LRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQT 129
Query: 259 --GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
GM+YLH ++IIHRDL+ +NI + +K+ DFGL+ + + ++
Sbjct: 130 ARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS--- 183
Query: 317 TSWRYAAPEVYKNEE---YDTKVDVFSFALILQEMIEGCPPFPTKQEKE--VPKAYIANE 371
S + APEV + ++ Y + DV++F ++L E++ G P+ ++ + +
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDIS 415
P ++ ++ L+ +C ++ RP+F +IL +++++
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 52/278 (18%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST--PMMIVTEYL 229
G VAVK L + E+ ++ F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 40 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 96
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR YL K K + +++ I +GM YL R IHR+L NIL ++
Sbjct: 97 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRNLATRNILVENENR 153
Query: 289 LKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALIL 345
+K+ DFGL+K+L K VKE E+ + APE ++ DV+SF ++L
Sbjct: 154 VKIGDFGLTKVLPQDKEYYKVKEP-----GESPIFWYAPESLTESKFSVASDVWSFGVVL 208
Query: 346 QEMIEGCPPFPTKQEKEVPKA----YIANERP--------------------PFRAPTTH 381
E+ F ++ + P A I N++ P P
Sbjct: 209 YEL------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI 262
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
Y ++ +CW+ +RP+FR + +R+D I D ++
Sbjct: 263 YM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNMA 295
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 145/290 (50%), Gaps = 31/290 (10%)
Query: 141 EVPEYEIDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELAL 200
E+P+ +I + S S GT W G VAVK L T + +++AF +E+ +
Sbjct: 9 EIPDGQITVGQRIGSGSF----GTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNEVGV 62
Query: 201 LQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIAR-- 258
L+K RH N++ F+G T+ + IVT++ L +L ++ + +DIAR
Sbjct: 63 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQT 118
Query: 259 --GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
GM+YLH ++IIHRDL+ +NI + +K+ DFGL+ + + + ++
Sbjct: 119 AQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS--- 172
Query: 317 TSWRYAAPEVYKNEE---YDTKVDVFSFALILQEMIEGCPPFPTKQEKE-----VPKAYI 368
S + APEV + ++ Y + DV++F ++L E++ G P+ ++ V + Y+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 369 ANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQL 418
+ P ++ ++ L+ +C ++ RP F QIL ++ ++ L
Sbjct: 233 S---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 279
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 145/294 (49%), Gaps = 39/294 (13%)
Query: 141 EVPEYEIDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELAL 200
E+P+ +I + S S GT W G VAVK L T + +++AF +E+ +
Sbjct: 9 EIPDGQITVGQRIGSGSF----GTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNEVGV 62
Query: 201 LQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIAR-- 258
L+K RH N++ F+G T+ + IVT++ L +L ++ + +DIAR
Sbjct: 63 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQT 118
Query: 259 --GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCE- 315
GM+YLH ++IIHRDL+ +NI + +K+ DFGL+ TVK + +
Sbjct: 119 AQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-------TVKSRWSGSHQF 168
Query: 316 ---ETSWRYAAPEVYKNEE---YDTKVDVFSFALILQEMIEGCPPFPTKQEKE-----VP 364
S + APEV + ++ Y + DV++F ++L E++ G P+ ++ V
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 228
Query: 365 KAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQL 418
+ Y++ P ++ ++ L+ +C ++ RP F QIL ++ ++ L
Sbjct: 229 RGYLS---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 279
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 145/294 (49%), Gaps = 39/294 (13%)
Query: 141 EVPEYEIDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELAL 200
E+P+ +I + S S GT W G VAVK L T + +++AF +E+ +
Sbjct: 6 EIPDGQITVGQRIGSGSF----GTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNEVGV 59
Query: 201 LQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIAR-- 258
L+K RH N++ F+G T+ + IVT++ L +L ++ + +DIAR
Sbjct: 60 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQT 115
Query: 259 --GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCE- 315
GM+YLH ++IIHRDL+ +NI + +K+ DFGL+ TVK + +
Sbjct: 116 AQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-------TVKSRWSGSHQF 165
Query: 316 ---ETSWRYAAPEVYKNEE---YDTKVDVFSFALILQEMIEGCPPFPTKQEKE-----VP 364
S + APEV + ++ Y + DV++F ++L E++ G P+ ++ V
Sbjct: 166 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 225
Query: 365 KAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQL 418
+ Y++ P ++ ++ L+ +C ++ RP F QIL ++ ++ L
Sbjct: 226 RGYLS---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 276
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 52/278 (18%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST--PMMIVTEYL 229
G VAVK L + E+ ++ F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 42 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 98
Query: 230 PKGDLRAYLKQKGA-LKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR YL+ + +++ I +GM YL R IHRDL NIL ++
Sbjct: 99 PYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 155
Query: 289 LKVADFGLSKLL---KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALIL 345
+K+ DFGL+K+L K VKE E+ + APE ++ DV+SF ++L
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEP-----GESPIFWYAPESLTESKFSVASDVWSFGVVL 210
Query: 346 QEMIEGCPPFPTKQEKEVPKA----YIANERP--------------------PFRAPTTH 381
E+ F ++ + P A I N++ P P
Sbjct: 211 YEL------FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI 264
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLS 419
Y ++ +CW+ +RP+FR + +R+D I D ++
Sbjct: 265 YM-----IMTECWNNNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 111/238 (46%), Gaps = 17/238 (7%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VAVK + + K F E+ + + + HPN+V+ + + +V EY
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLF-REVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASG 97
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ YL G K A I + Y H+ + I+HRDL+ N+L D ++K+
Sbjct: 98 GEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLDADXNIKI 154
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDT-KVDVFSFALILQEMIE 350
ADFG S F N + C YAAPE+++ ++YD +VDV+S +IL ++
Sbjct: 155 ADFGFSNEFTFGNKLD----AFCGAPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 351 GCPPFPTKQEKEVPKAYIANE-RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
G PF + KE+ + + + R PF T L++ P +R T QI
Sbjct: 209 GSLPFDGQNLKELRERVLRGKYRIPFYXSTD-----CENLLKKFLILNPSKRGTLEQI 261
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 14/237 (5%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VAVK L + D V E+ L+ RHP++++ ++ T +V EY+
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G+L Y+ + G ++ A + I ++Y H + ++HRDL+P N+L D + K+
Sbjct: 96 GELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKI 152
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEY-DTKVDVFSFALILQEMIE 350
ADFGLS ++ ++ +C S YAAPEV Y +VD++S +IL ++
Sbjct: 153 ADFGLSNMMSDGEFLR----TSC--GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLC 206
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
G PF ++ VP + F P + + L+ +P +R T + I
Sbjct: 207 GTLPF---DDEHVPTLFKKIRGGVFYIP-EYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 145/290 (50%), Gaps = 31/290 (10%)
Query: 141 EVPEYEIDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELAL 200
E+P+ +I + S S GT W G VAVK L T + +++AF +E+ +
Sbjct: 4 EIPDGQITVGQRIGSGSF----GTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNEVGV 57
Query: 201 LQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIAR-- 258
L+K RH N++ F+G T+ + IVT++ L +L ++ + +DIAR
Sbjct: 58 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQT 113
Query: 259 --GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
GM+YLH ++IIHRDL+ +NI + +K+ DFGL+ + + + ++
Sbjct: 114 AQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS--- 167
Query: 317 TSWRYAAPEVYKNEE---YDTKVDVFSFALILQEMIEGCPPFPTKQEKE-----VPKAYI 368
S + APEV + ++ Y + DV++F ++L E++ G P+ ++ V + Y+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 369 ANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQL 418
+ P ++ ++ L+ +C ++ RP F QIL ++ ++ L
Sbjct: 228 S---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 14/237 (5%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VAVK L + D V E+ L+ RHP++++ ++ + + +V EY+
Sbjct: 41 GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G+L Y+ + G L + + I G++Y H + ++HRDL+P N+L D + K+
Sbjct: 101 GELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKI 157
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEY-DTKVDVFSFALILQEMIE 350
ADFGLS ++ ++ +C S YAAPEV Y +VD++S +IL ++
Sbjct: 158 ADFGLSNMMSDGEFLRX----SC--GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLC 211
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
G PF + VP + F P + + L++ +P +R T + I
Sbjct: 212 GTLPF---DDDHVPTLFKKICDGIFYTP-QYLNPSVISLLKHMLQVDPMKRATIKDI 264
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 145/294 (49%), Gaps = 39/294 (13%)
Query: 141 EVPEYEIDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELAL 200
E+P+ +I + S S GT W G VAVK L T + +++AF +E+ +
Sbjct: 4 EIPDGQITVGQRIGSGSF----GTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNEVGV 57
Query: 201 LQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIAR-- 258
L+K RH N++ F+G T + + IVT++ L +L ++ + +DIAR
Sbjct: 58 LRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQT 113
Query: 259 --GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCE- 315
GM+YLH ++IIHRDL+ +NI + +K+ DFGL+ TVK + +
Sbjct: 114 AQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-------TVKSRWSGSHQF 163
Query: 316 ---ETSWRYAAPEVYKNEE---YDTKVDVFSFALILQEMIEGCPPFPTKQEKE-----VP 364
S + APEV + ++ Y + DV++F ++L E++ G P+ ++ V
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 223
Query: 365 KAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQL 418
+ Y++ P ++ ++ L+ +C ++ RP F QIL ++ ++ L
Sbjct: 224 RGYLS---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 13/196 (6%)
Query: 173 TQVAVKTLGEEV-FTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
T VAVK L V T E+ + F E+ + K +H N+V+ LG + + +V Y P
Sbjct: 46 TTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPN 105
Query: 232 GDLRAYLKQKGALKPT---LAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
G L L P K A A G+N+LHEN IHRD++ +NIL D++
Sbjct: 106 GSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFT 162
Query: 289 LKVADFGLSKLL-KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQE 347
K++DFGL++ KFA V R V + Y APE + E K D++SF ++L E
Sbjct: 163 AKISDFGLARASEKFAQXVXXSRIV----GTTAYXAPEALRG-EITPKSDIYSFGVVLLE 217
Query: 348 MIEGCPPFPTKQEKEV 363
+I G P +E ++
Sbjct: 218 IITGLPAVDEHREPQL 233
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 113/220 (51%), Gaps = 14/220 (6%)
Query: 150 KELDFSNSVEITKGTF---RIASWRGTQ--VAVKTLGEEVFTDEDKVKAFIDELALLQKI 204
K DF+ + + KG+F ++ +GT AVK L ++V +D V+ + E +L
Sbjct: 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 398
Query: 205 RHPNVVQFLGAVTQSTP-MMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYL 263
P + L + Q+ + V EY+ GDL +++Q G K AV +A +IA G+ +L
Sbjct: 399 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 458
Query: 264 HENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAA 323
+ II+RDL+ N++ D GH+K+ADFG+ K + + T + Y A
Sbjct: 459 QS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPD-----YIA 510
Query: 324 PEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEV 363
PE+ + Y VD ++F ++L EM+ G PF + E E+
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 550
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 14/217 (6%)
Query: 153 DFSNSVEITKGTF---RIASWRGTQV--AVKTLGEEVFTDEDKVKAFIDEL-ALLQKIRH 206
DF I KG+F +A + +V AVK L ++ + + K + E LL+ ++H
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 207 PNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHEN 266
P +V + + + V +Y+ G+L +L+++ A +A +IA + YLH
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL 158
Query: 267 RPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEV 326
I++RDL+P NIL D GH+ + DFGL K ++ + + + Y APEV
Sbjct: 159 N---IVYRDLKPENILLDSQGHIVLTDFGLCK-----ENIEHNSTTSTFCGTPEYLAPEV 210
Query: 327 YKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEV 363
+ YD VD + +L EM+ G PPF ++ E+
Sbjct: 211 LHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM 247
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 114/260 (43%), Gaps = 36/260 (13%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T VAVK L EE D F E AL+ + +PN+V+ LG PM ++ EY+ G
Sbjct: 78 TMVAVKMLKEE--ASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYG 135
Query: 233 DLRAYLKQKGALK--------------------PTLAVKFALDIAR----GMNYLHENRP 268
DL +L+ P L+ L IAR GM YL E +
Sbjct: 136 DLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK- 194
Query: 269 EAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYK 328
+HRDL N L ++ +K+ADFGLS+ + A+ K D + R+ PE
Sbjct: 195 --FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGN---DAIPIRWMPPESIF 249
Query: 329 NEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLR 387
Y T+ DV+++ ++L E+ G P+ +EV Y + P + L
Sbjct: 250 YNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV--IYYVRDGNILACP-ENCPLELY 306
Query: 388 ELIEDCWSEEPFRRPTFRQI 407
L+ CWS+ P RP+F I
Sbjct: 307 NLMRLCWSKLPADRPSFCSI 326
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 144/290 (49%), Gaps = 31/290 (10%)
Query: 141 EVPEYEIDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELAL 200
E+P+ +I + S S GT W G VAVK L T + +++AF +E+ +
Sbjct: 32 EIPDGQITVGQRIGSGSF----GTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNEVGV 85
Query: 201 LQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIAR-- 258
L+K RH N++ F+G T+ + IVT++ L +L ++ + +DIAR
Sbjct: 86 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQT 141
Query: 259 --GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
GM+YLH ++IIHRDL+ +NI + +K+ DFGL+ + + ++
Sbjct: 142 AQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS--- 195
Query: 317 TSWRYAAPEVYKNEE---YDTKVDVFSFALILQEMIEGCPPFPTKQEKE-----VPKAYI 368
S + APEV + ++ Y + DV++F ++L E++ G P+ ++ V + Y+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 369 ANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQL 418
+ P ++ ++ L+ +C ++ RP F QIL ++ ++ L
Sbjct: 256 S---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 302
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 34/248 (13%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ AVK + + ++D + E+ LL+K+ HPN+++ + S+ IV E G+
Sbjct: 49 EYAVKVINKASAKNKD-TSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL---RDDSGHLK 290
L + ++ A + + G+ Y+H++ I+HRDL+P NIL ++ +K
Sbjct: 108 LFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIK 164
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE 350
+ DFGLS + NT +DR T Y APEV + YD K DV+S +IL ++
Sbjct: 165 IIDFGLSTCFQ-QNTKMKDRIGTA-----YYIAPEVLRG-TYDEKCDVWSAGVILYILLS 217
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGL----------RELIEDCWSEEPFR 400
G PPF K E ++ K R T YA+ L ++LI + P
Sbjct: 218 GTPPFYGKNEYDILK----------RVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSL 267
Query: 401 RPTFRQIL 408
R T Q L
Sbjct: 268 RITATQCL 275
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 126/256 (49%), Gaps = 40/256 (15%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VA+KT+ E E F++E +++++ +VV+ LG V+Q P +++ E + +G
Sbjct: 46 TRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 103
Query: 233 DLRAYLKQKGALKPTLA-------------VKFALDIARGMNYLHENRPEAIIHRDLEPS 279
DL++YL+ +L+P +A ++ A +IA GM YL+ N+ +HRDL
Sbjct: 104 DLKSYLR---SLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAAR 157
Query: 280 NILRDDSGHLKVADFGLSKLL----KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
N + + +K+ DFG+++ + + K PV R+ +PE K+ + T
Sbjct: 158 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-------RWMSPESLKDGVFTTY 210
Query: 336 VDVFSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIED 392
DV+SF ++L E+ P+ ++V + + P P L EL+
Sbjct: 211 SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-----LFELMRM 265
Query: 393 CWSEEPFRRPTFRQIL 408
CW P RP+F +I+
Sbjct: 266 CWQYNPKMRPSFLEII 281
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 114/220 (51%), Gaps = 14/220 (6%)
Query: 150 KELDFSNSVEITKGTF---RIASWRGTQ--VAVKTLGEEVFTDEDKVKAFIDELALLQKI 204
K DF+ + + KG+F ++ +GT AVK L ++V +D V+ + E +L
Sbjct: 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 77
Query: 205 RHPNVVQFLGAVTQSTP-MMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYL 263
P + L + Q+ + V EY+ GDL +++Q G K AV +A +IA G+ +L
Sbjct: 78 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 137
Query: 264 HENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAA 323
+ + II+RDL+ N++ D GH+K+ADFG+ K + + T + Y A
Sbjct: 138 ---QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPD-----YIA 189
Query: 324 PEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEV 363
PE+ + Y VD ++F ++L EM+ G PF + E E+
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 229
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 116/239 (48%), Gaps = 22/239 (9%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T F+DE ++ + HP++V+ LG V S + +VT+ +P G L
Sbjct: 70 VAIKILNET--TGPKANVEFMDEALIMASMDHPHLVRLLG-VCLSPTIQLVTQLMPHGCL 126
Query: 235 RAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+ + K + L + + + IA+GM YL E R ++HRDL N+L H+K+ D
Sbjct: 127 LEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITD 183
Query: 294 FGLSKLL----KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMI 349
FGL++LL K N P+ ++ A E ++ + DV+S+ + + E++
Sbjct: 184 FGLARLLEGDEKEYNADGGKMPI-------KWMALECIHYRKFTHQSDVWSYGVTIWELM 236
Query: 350 E-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
G P+ +E+P ER P T Y ++ CW + RP F+++
Sbjct: 237 TFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVY---MVMVKCWMIDADSRPKFKEL 292
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 144/290 (49%), Gaps = 31/290 (10%)
Query: 141 EVPEYEIDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELAL 200
E+P+ +I + S S GT W G VAVK L T + +++AF +E+ +
Sbjct: 24 EIPDGQITVGQRIGSGSF----GTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNEVGV 77
Query: 201 LQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIAR-- 258
L+K RH N++ F+G T+ + IVT++ L +L ++ + +DIAR
Sbjct: 78 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQT 133
Query: 259 --GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
GM+YLH ++IIHRDL+ +NI + +K+ DFGL+ + + ++
Sbjct: 134 AQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS--- 187
Query: 317 TSWRYAAPEVYKNEE---YDTKVDVFSFALILQEMIEGCPPFPTKQEKE-----VPKAYI 368
S + APEV + ++ Y + DV++F ++L E++ G P+ ++ V + Y+
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 247
Query: 369 ANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQL 418
+ P ++ ++ L+ +C ++ RP F QIL ++ ++ L
Sbjct: 248 S---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 294
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 108/259 (41%), Gaps = 55/259 (21%)
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFA 253
I EL +L + P +V F GA + I E++ G L LK+ G + + K +
Sbjct: 113 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 172
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL--KFANTVKEDRP 311
+ + +G+ YL E I+HRD++PSNIL + G +K+ DFG+S L AN+ R
Sbjct: 173 IAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR- 229
Query: 312 VTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEV-------- 363
Y +PE + Y + D++S L L EM G P P KE+
Sbjct: 230 --------SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQV 281
Query: 364 ---------------------------PKA------YIANERPPFRAPTTHYAYGLRELI 390
P A YI NE PP + P+ ++ ++ +
Sbjct: 282 EGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPP-KLPSAVFSLEFQDFV 340
Query: 391 EDCWSEEPFRRPTFRQILM 409
C + P R +Q+++
Sbjct: 341 NKCLIKNPAERADLKQLMV 359
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 116/239 (48%), Gaps = 22/239 (9%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T F+DE ++ + HP++V+ LG V S + +VT+ +P G L
Sbjct: 47 VAIKILNET--TGPKANVEFMDEALIMASMDHPHLVRLLG-VCLSPTIQLVTQLMPHGCL 103
Query: 235 RAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+ + K + L + + + IA+GM YL E R ++HRDL N+L H+K+ D
Sbjct: 104 LEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITD 160
Query: 294 FGLSKLL----KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMI 349
FGL++LL K N P+ ++ A E ++ + DV+S+ + + E++
Sbjct: 161 FGLARLLEGDEKEYNADGGKMPI-------KWMALECIHYRKFTHQSDVWSYGVTIWELM 213
Query: 350 E-GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
G P+ +E+P ER P T Y ++ CW + RP F+++
Sbjct: 214 TFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVY---MVMVKCWMIDADSRPKFKEL 269
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 52 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 111
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 112 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 168
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 169 TDFG------FAKRVKGRTWTLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 221 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 258
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 34/248 (13%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ AVK + + ++D + E+ LL+K+ HPN+++ + S+ IV E G+
Sbjct: 49 EYAVKVINKASAKNKD-TSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL---RDDSGHLK 290
L + ++ A + + G+ Y+H++ I+HRDL+P NIL ++ +K
Sbjct: 108 LFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIK 164
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE 350
+ DFGLS + NT +DR T Y APEV + YD K DV+S +IL ++
Sbjct: 165 IIDFGLSTCFQ-QNTKMKDRIGTA-----YYIAPEVLRG-TYDEKCDVWSAGVILYILLS 217
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGL----------RELIEDCWSEEPFR 400
G PPF K E ++ K R T YA+ L ++LI + P
Sbjct: 218 GTPPFYGKNEYDILK----------RVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSL 267
Query: 401 RPTFRQIL 408
R T Q L
Sbjct: 268 RITATQCL 275
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 34/248 (13%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ AVK + + ++D + E+ LL+K+ HPN+++ + S+ IV E G+
Sbjct: 49 EYAVKVINKASAKNKD-TSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL---RDDSGHLK 290
L + ++ A + + G+ Y+H++ I+HRDL+P NIL ++ +K
Sbjct: 108 LFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIK 164
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE 350
+ DFGLS + NT +DR T Y APEV + YD K DV+S +IL ++
Sbjct: 165 IIDFGLSTCFQ-QNTKMKDRIGTA-----YYIAPEVLRG-TYDEKCDVWSAGVILYILLS 217
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGL----------RELIEDCWSEEPFR 400
G PPF K E ++ K R T YA+ L ++LI + P
Sbjct: 218 GTPPFYGKNEYDILK----------RVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSL 267
Query: 401 RPTFRQIL 408
R T Q L
Sbjct: 268 RITATQCL 275
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 129/256 (50%), Gaps = 40/256 (15%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VA+KT+ E E +++ F++E +++++ +VV+ LG V+Q P +++ E + +G
Sbjct: 56 TRVAIKTVNEAASMRE-RIE-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 113
Query: 233 DLRAYLKQKGALKPTLA-------------VKFALDIARGMNYLHENRPEAIIHRDLEPS 279
DL++YL+ +L+P +A ++ A +IA GM YL+ N+ +HRDL
Sbjct: 114 DLKSYLR---SLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAAR 167
Query: 280 NILRDDSGHLKVADFGLSKLL----KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
N + + +K+ DFG+++ + + K PV R+ +PE K+ + T
Sbjct: 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-------RWMSPESLKDGVFTTY 220
Query: 336 VDVFSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIED 392
DV+SF ++L E+ P+ ++V + + P P L EL+
Sbjct: 221 SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-----LFELMRM 275
Query: 393 CWSEEPFRRPTFRQIL 408
CW P RP+F +I+
Sbjct: 276 CWQYNPKMRPSFLEII 291
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 184 TDFG------FAKRVKGRTWTLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 236 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 273
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 59 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 118
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 119 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 175
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 176 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 228 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 265
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 108/260 (41%), Gaps = 55/260 (21%)
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFA 253
I EL +L + P +V F GA + I E++ G L LK+ G + + K +
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL--KFANTVKEDRP 311
+ + +G+ YL E I+HRD++PSNIL + G +K+ DFG+S L AN+ R
Sbjct: 111 IAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR- 167
Query: 312 VTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEV-------- 363
Y +PE + Y + D++S L L EM G P P KE+
Sbjct: 168 --------SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQV 219
Query: 364 ---------------------------PKA------YIANERPPFRAPTTHYAYGLRELI 390
P A YI NE PP + P+ ++ ++ +
Sbjct: 220 EGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPP-KLPSGVFSLEFQDFV 278
Query: 391 EDCWSEEPFRRPTFRQILMR 410
C + P R +Q+++
Sbjct: 279 NKCLIKNPAERADLKQLMVH 298
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 108/260 (41%), Gaps = 55/260 (21%)
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFA 253
I EL +L + P +V F GA + I E++ G L LK+ G + + K +
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL--KFANTVKEDRP 311
+ + +G+ YL E I+HRD++PSNIL + G +K+ DFG+S L AN+ R
Sbjct: 111 IAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR- 167
Query: 312 VTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEV-------- 363
Y +PE + Y + D++S L L EM G P P KE+
Sbjct: 168 --------SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQV 219
Query: 364 ---------------------------PKA------YIANERPPFRAPTTHYAYGLRELI 390
P A YI NE PP + P+ ++ ++ +
Sbjct: 220 EGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPP-KLPSGVFSLEFQDFV 278
Query: 391 EDCWSEEPFRRPTFRQILMR 410
C + P R +Q+++
Sbjct: 279 NKCLIKNPAERADLKQLMVH 298
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 9/193 (4%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFID-ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLP 230
G A+K L + + K A E +L++++HP +V + A + ++ EYL
Sbjct: 45 GKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLS 104
Query: 231 KGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
G+L L+++G A + +I+ + +LH+ + II+RDL+P NI+ + GH+K
Sbjct: 105 GGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVK 161
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE 350
+ DFGL K TV T E Y APE+ ++ VD +S ++ +M+
Sbjct: 162 LTDFGLCKESIHDGTVTHTFCGTIE-----YMAPEILMRSGHNRAVDWWSLGALMYDMLT 216
Query: 351 GCPPFPTKQEKEV 363
G PPF + K+
Sbjct: 217 GAPPFTGENRKKT 229
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 66 GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 18/198 (9%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G VA+K + ++ ++E I E++L+++++H N+V+ + + +V E++
Sbjct: 30 GVYVALKEV--KLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM-D 86
Query: 232 GDLRAYLKQKG------ALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
DL+ Y+ + L+ L F + +G+ + HEN+ I+HRDL+P N+L +
Sbjct: 87 NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINK 143
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEE-YDTKVDVFSFALI 344
G LK+ DFGL++ VT W Y AP+V Y T +D++S I
Sbjct: 144 RGQLKLGDFGLARAFGIPVNTFSSEVVTL----W-YRAPDVLMGSRTYSTSIDIWSCGCI 198
Query: 345 LQEMIEGCPPFPTKQEKE 362
L EMI G P FP ++E
Sbjct: 199 LAEMITGKPLFPGTNDEE 216
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 66 GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 66 GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 108/259 (41%), Gaps = 55/259 (21%)
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFA 253
I EL +L + P +V F GA + I E++ G L LK+ G + + K +
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL--KFANTVKEDRP 311
+ + +G+ YL E I+HRD++PSNIL + G +K+ DFG+S L AN+ R
Sbjct: 111 IAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR- 167
Query: 312 VTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEV-------- 363
Y +PE + Y + D++S L L EM G P P KE+
Sbjct: 168 --------SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQV 219
Query: 364 ---------------------------PKA------YIANERPPFRAPTTHYAYGLRELI 390
P A YI NE PP + P+ ++ ++ +
Sbjct: 220 EGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPP-KLPSGVFSLEFQDFV 278
Query: 391 EDCWSEEPFRRPTFRQILM 409
C + P R +Q+++
Sbjct: 279 NKCLIKNPAERADLKQLMV 297
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 123/246 (50%), Gaps = 17/246 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 87 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 146
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 147 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 203
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 204 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRL 411
PPF Q ++ + ++ + R P +H++ L++L+ + + +R F + +
Sbjct: 256 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNLLQVDLTKR--FGNLKNGV 309
Query: 412 DDISDQ 417
+DI +
Sbjct: 310 NDIKNH 315
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 108/259 (41%), Gaps = 55/259 (21%)
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFA 253
I EL +L + P +V F GA + I E++ G L LK+ G + + K +
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL--KFANTVKEDRP 311
+ + +G+ YL E I+HRD++PSNIL + G +K+ DFG+S L AN+ R
Sbjct: 111 IAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR- 167
Query: 312 VTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEV-------- 363
Y +PE + Y + D++S L L EM G P P KE+
Sbjct: 168 --------SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQV 219
Query: 364 ---------------------------PKA------YIANERPPFRAPTTHYAYGLRELI 390
P A YI NE PP + P+ ++ ++ +
Sbjct: 220 EGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPP-KLPSGVFSLEFQDFV 278
Query: 391 EDCWSEEPFRRPTFRQILM 409
C + P R +Q+++
Sbjct: 279 NKCLIKNPAERADLKQLMV 297
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 120/272 (44%), Gaps = 23/272 (8%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIASW----RGTQV-AVKTLGEEVFTDEDKVKAFIDELA 199
++ DP++L FS+ EI G+F + R ++V A+K + +K + I E+
Sbjct: 48 FKDDPEKL-FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR 106
Query: 200 LLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARG 259
LQK+RHPN +Q+ G + +V EY K L+ +G
Sbjct: 107 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQG 166
Query: 260 MNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW 319
+ YLH + +IHRD++ NIL + G +K+ DFG + ++ AN +
Sbjct: 167 LAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV---------GTP 214
Query: 320 RYAAPEV---YKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ APEV +YD KVDV+S + E+ E PP NE P +
Sbjct: 215 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ 274
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ H++ R ++ C + P RPT +L
Sbjct: 275 --SGHWSEYFRNFVDSCLQKIPQDRPTSEVLL 304
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 59 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 118
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 119 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 175
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 176 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 228 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 265
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 9/193 (4%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFID-ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLP 230
G A+K L + + K A E +L++++HP +V + A + ++ EYL
Sbjct: 45 GKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLS 104
Query: 231 KGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
G+L L+++G A + +I+ + +LH+ + II+RDL+P NI+ + GH+K
Sbjct: 105 GGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVK 161
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE 350
+ DFGL K TV T E Y APE+ ++ VD +S ++ +M+
Sbjct: 162 LTDFGLCKESIHDGTVTHXFCGTIE-----YMAPEILMRSGHNRAVDWWSLGALMYDMLT 216
Query: 351 GCPPFPTKQEKEV 363
G PPF + K+
Sbjct: 217 GAPPFTGENRKKT 229
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 184 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 236 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 273
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 184 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 236 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 273
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 184 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 236 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 273
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 108/259 (41%), Gaps = 55/259 (21%)
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFA 253
I EL +L + P +V F GA + I E++ G L LK+ G + + K +
Sbjct: 78 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 137
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL--KFANTVKEDRP 311
+ + +G+ YL E I+HRD++PSNIL + G +K+ DFG+S L AN+ R
Sbjct: 138 IAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR- 194
Query: 312 VTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEV-------- 363
Y +PE + Y + D++S L L EM G P P KE+
Sbjct: 195 --------SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQV 246
Query: 364 ---------------------------PKA------YIANERPPFRAPTTHYAYGLRELI 390
P A YI NE PP + P+ ++ ++ +
Sbjct: 247 EGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPP-KLPSGVFSLEFQDFV 305
Query: 391 EDCWSEEPFRRPTFRQILM 409
C + P R +Q+++
Sbjct: 306 NKCLIKNPAERADLKQLMV 324
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 23/269 (8%)
Query: 148 DPKELDFSNSVEITKGTFRIASW----RGTQV-AVKTLGEEVFTDEDKVKAFIDELALLQ 202
DP++L FS+ EI G+F + R ++V A+K + +K + I E+ LQ
Sbjct: 12 DPEKL-FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNY 262
K+RHPN +Q+ G + +V EY K L+ +G+ Y
Sbjct: 71 KLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 130
Query: 263 LHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYA 322
LH + +IHRD++ NIL + G +K+ DFG + ++ AN + +
Sbjct: 131 LHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV---------GTPYWM 178
Query: 323 APEV---YKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFRAPT 379
APEV +YD KVDV+S + E+ E PP NE P + +
Sbjct: 179 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ--S 236
Query: 380 THYAYGLRELIEDCWSEEPFRRPTFRQIL 408
H++ R ++ C + P RPT +L
Sbjct: 237 GHWSEYFRNFVDSCLQKIPQDRPTSEVLL 265
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 127 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 184 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 236 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 273
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 184 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 236 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 273
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 126/256 (49%), Gaps = 40/256 (15%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VA+KT+ E E F++E +++++ +VV+ LG V+Q P +++ E + +G
Sbjct: 41 TRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 98
Query: 233 DLRAYLKQKGALKPTL-------------AVKFALDIARGMNYLHENRPEAIIHRDLEPS 279
DL++YL+ +L+P + ++ A +IA GM YL+ N+ +HRDL
Sbjct: 99 DLKSYLR---SLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAAR 152
Query: 280 NILRDDSGHLKVADFGLSKLLKFANTVKEDR----PVTCEETSWRYAAPEVYKNEEYDTK 335
N + + +K+ DFG+++ + + ++ PV R+ +PE K+ + T
Sbjct: 153 NCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV-------RWMSPESLKDGVFTTY 205
Query: 336 VDVFSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIED 392
DV+SF ++L E+ P+ ++V + + P P L EL+
Sbjct: 206 SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-----LLELMRM 260
Query: 393 CWSEEPFRRPTFRQIL 408
CW P RP+F +I+
Sbjct: 261 CWQYNPKMRPSFLEII 276
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 120/243 (49%), Gaps = 25/243 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VA+K + ++V D E++ L+ +RHP++++ + +++V EY
Sbjct: 38 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AG 96
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
+L Y+ Q+ + A +F I + Y H ++ I+HRDL+P N+L D+ ++K+
Sbjct: 97 NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKI 153
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEY-DTKVDVFSFALILQEMIE 350
ADFGLS ++ N +K +C S YAAPEV + Y +VDV+S +IL M+
Sbjct: 154 ADFGLSNIMTDGNFLK----TSC--GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML- 206
Query: 351 GCPPFPTKQEKEVPKAY--IAN---ERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFR 405
C P E +P + I+N P F +P G LI+ P R +
Sbjct: 207 -CRRLPFDDE-SIPVLFKNISNGVYTLPKFLSP------GAAGLIKRMLIVNPLNRISIH 258
Query: 406 QIL 408
+I+
Sbjct: 259 EIM 261
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 120/243 (49%), Gaps = 25/243 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VA+K + ++V D E++ L+ +RHP++++ + +++V EY
Sbjct: 39 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AG 97
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
+L Y+ Q+ + A +F I + Y H ++ I+HRDL+P N+L D+ ++K+
Sbjct: 98 NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKI 154
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEY-DTKVDVFSFALILQEMIE 350
ADFGLS ++ N +K +C S YAAPEV + Y +VDV+S +IL M+
Sbjct: 155 ADFGLSNIMTDGNFLK----TSC--GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML- 207
Query: 351 GCPPFPTKQEKEVPKAY--IAN---ERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFR 405
C P E +P + I+N P F +P G LI+ P R +
Sbjct: 208 -CRRLPFDDE-SIPVLFKNISNGVYTLPKFLSP------GAAGLIKRMLIVNPLNRISIH 259
Query: 406 QIL 408
+I+
Sbjct: 260 EIM 262
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 34/253 (13%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VA+KT+ E E F++E +++++ +VV+ LG V+Q P +++ E + +G
Sbjct: 50 TRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 107
Query: 233 DLRAYLKQ---KGALKPTLA-------VKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
DL++YL+ + P LA ++ A +IA GM YL+ N+ +HRDL N +
Sbjct: 108 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCM 164
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDR----PVTCEETSWRYAAPEVYKNEEYDTKVDV 338
+ +K+ DFG+++ + + ++ PV R+ +PE K+ + T DV
Sbjct: 165 VAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV-------RWMSPESLKDGVFTTYSDV 217
Query: 339 FSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWS 395
+SF ++L E+ P+ ++V + + P P L EL+ CW
Sbjct: 218 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-----LFELMRMCWQ 272
Query: 396 EEPFRRPTFRQIL 408
P RP+F +I+
Sbjct: 273 YNPKMRPSFLEII 285
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 12/210 (5%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VAVK + + K F E+ +++ + HPN+V+ + + +V EY
Sbjct: 40 GREVAVKIIDKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASG 98
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ YL G +K A I + Y H+ + I+HRDL+ N+L D ++K+
Sbjct: 99 GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ---KYIVHRDLKAENLLLDGDMNIKI 155
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDT-KVDVFSFALILQEMIE 350
ADFG S N + C S YAAPE+++ ++YD +VDV+S +IL ++
Sbjct: 156 ADFGFSNEFTVGNKLD----TFC--GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
Query: 351 GCPPFPTKQEKEVPKAYIANE-RPPFRAPT 379
G PF + KE+ + + + R PF T
Sbjct: 210 GSLPFDGQNLKELRERVLRGKYRIPFYMST 239
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 144/290 (49%), Gaps = 31/290 (10%)
Query: 141 EVPEYEIDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELAL 200
E+P+ +I + S S GT W G VAVK L T + +++AF +E+ +
Sbjct: 4 EIPDGQITVGQRIGSGSF----GTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNEVGV 57
Query: 201 LQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIAR-- 258
L+K RH N++ F+G T+ + IVT++ L +L ++ + +DIAR
Sbjct: 58 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQT 113
Query: 259 --GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
GM+YLH ++IIHRDL+ +NI + +K+ DFGL+ + + ++
Sbjct: 114 AQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS--- 167
Query: 317 TSWRYAAPEVYKNEE---YDTKVDVFSFALILQEMIEGCPPFPTKQEKE-----VPKAYI 368
S + APEV + ++ Y + DV++F ++L E++ G P+ ++ V + Y+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 369 ANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQL 418
+ P ++ ++ L+ +C ++ RP F QIL ++ ++ L
Sbjct: 228 S---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 126
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N++ D G++KV
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 184 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 236 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 273
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N++ D G++KV
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 123/246 (50%), Gaps = 17/246 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY P
Sbjct: 66 GNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N++ D G++KV
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFGL+K +K P Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFGLAKRVKGRTWXLCGTP--------EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRL 411
PPF Q ++ + ++ + R P +H++ L++L+ + + +R F + +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNLLQVDLTKR--FGNLKNGV 288
Query: 412 DDISDQ 417
+DI +
Sbjct: 289 NDIKNH 294
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 37/282 (13%)
Query: 144 EYEIDPKELDFSNSVEITKGTFRIASWRG------TQVAVKTLGEEVFTDEDKVKAFIDE 197
+YE D + + V + KGT+ I + G ++A+K + E D + +E
Sbjct: 18 DYEYD----ENGDRVVLGKGTYGIV-YAGRDLSNQVRIAIKEIPER---DSRYSQPLHEE 69
Query: 198 LALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQK-GALK---PTLAVKFA 253
+AL + ++H N+VQ+LG+ +++ + I E +P G L A L+ K G LK T+ +
Sbjct: 70 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-YT 128
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDD-SGHLKVADFGLSKLLKFANTVKEDRPV 312
I G+ YLH+N+ I+HRD++ N+L + SG LK++DFG SK L N
Sbjct: 129 KQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-------- 177
Query: 313 TCEET---SWRYAAPEVYKN--EEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAY 367
C ET + +Y APE+ Y D++S + EM G PPF E +
Sbjct: 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK 237
Query: 368 IANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILM 409
+ + P + A + I C+ +P +R +L+
Sbjct: 238 VGMFKVHPEIPESMSAEA-KAFILKCFEPDPDKRACANDLLV 278
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 16/220 (7%)
Query: 192 KAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ-KGALKPTLAV 250
+A D + + + H ++V+ LG S+ + +VT+YLP G L +++Q +GAL P L +
Sbjct: 60 QAVTDHMLAIGSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRGALGPQLLL 118
Query: 251 KFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDR 310
+ + IA+GM YL E+ ++HR+L N+L ++VADFG++ LL +D+
Sbjct: 119 NWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLP-----PDDK 170
Query: 311 PVTCEE--TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAY 367
+ E T ++ A E +Y + DV+S+ + + E++ G P+ + EVP
Sbjct: 171 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL 230
Query: 368 IANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
ER T Y ++ CW + RPTF+++
Sbjct: 231 EKGERLAQPQICTIDVY---MVMVKCWMIDENIRPTFKEL 267
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N++ D G++KV
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 16/220 (7%)
Query: 192 KAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ-KGALKPTLAV 250
+A D + + + H ++V+ LG S+ + +VT+YLP G L +++Q +GAL P L +
Sbjct: 78 QAVTDHMLAIGSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRGALGPQLLL 136
Query: 251 KFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDR 310
+ + IA+GM YL E+ ++HR+L N+L ++VADFG++ LL +D+
Sbjct: 137 NWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLP-----PDDK 188
Query: 311 PVTCEE--TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAY 367
+ E T ++ A E +Y + DV+S+ + + E++ G P+ + EVP
Sbjct: 189 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL 248
Query: 368 IANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
ER T Y ++ CW + RPTF+++
Sbjct: 249 EKGERLAQPQICTIDVY---MVMVKCWMIDENIRPTFKEL 285
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 120/243 (49%), Gaps = 25/243 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VA+K + ++V D E++ L+ +RHP++++ + +++V EY
Sbjct: 33 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AG 91
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
+L Y+ Q+ + A +F I + Y H ++ I+HRDL+P N+L D+ ++K+
Sbjct: 92 NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKI 148
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEY-DTKVDVFSFALILQEMIE 350
ADFGLS ++ N +K +C S YAAPEV + Y +VDV+S +IL M+
Sbjct: 149 ADFGLSNIMTDGNFLK----TSC--GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML- 201
Query: 351 GCPPFPTKQEKEVPKAY--IAN---ERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFR 405
C P E +P + I+N P F +P G LI+ P R +
Sbjct: 202 -CRRLPFDDE-SIPVLFKNISNGVYTLPKFLSP------GAAGLIKRMLIVNPLNRISIH 253
Query: 406 QIL 408
+I+
Sbjct: 254 EIM 256
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 21/267 (7%)
Query: 153 DFSNSVEITKGTFRIASWR------GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRH 206
D N E+ GT W+ G +AVK + +E+K + +D +L+
Sbjct: 26 DLENLGEMGSGTCG-QVWKMRFRKTGHVIAVKQMRRSGNKEENK-RILMDLDVVLKSHDC 83
Query: 207 PNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHEN 266
P +VQ G +T + I E + + + +G + + K + I + + YL E
Sbjct: 84 PYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143
Query: 267 RPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEV 326
+IHRD++PSNIL D+ G +K+ DFG+S + + +DR C Y APE
Sbjct: 144 --HGVIHRDVKPSNILLDERGQIKLCDFGISG--RLVDDKAKDRSAGCAA----YMAPER 195
Query: 327 Y-----KNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFRAPTTH 381
+YD + DV+S + L E+ G P+ + + E PP
Sbjct: 196 IDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMG 255
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQIL 408
++ + ++DC +++ +RP + ++L
Sbjct: 256 FSGDFQSFVKDCLTKDHRKRPKYNKLL 282
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E + Q + P +V+ + ++ + +V EY P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPG 126
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G++KV
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKV 183
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
ADFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 184 ADFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 236 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 273
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 29/259 (11%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ--STPMMIVTEYL 229
G VAVK L + D+ + F E+ +L+ + +V++ G + +V EYL
Sbjct: 39 GALVAVKQLQH---SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 95
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR +L + + L + + ++ I +GM YL R +HRDL NIL + H
Sbjct: 96 PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAH 152
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEM 348
+K+ADFGL+KLL R W APE + + + DV+SF ++L E+
Sbjct: 153 VKIADFGLAKLLPLDKDYYVVREPGQSPIFW--YAPESLSDNIFSRQSDVWSFGVVLYEL 210
Query: 349 I----EGCPPFP-----TKQEKEVP------KAYIANERPPFRAPTTHYAYGLRELIEDC 393
+ C P E++VP + +R P AP A + EL++ C
Sbjct: 211 FTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLP--APPACPA-EVHELMKLC 267
Query: 394 WSEEPFRRPTFRQILMRLD 412
W+ P RP+F + +LD
Sbjct: 268 WAPSPQDRPSFSALGPQLD 286
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 120/243 (49%), Gaps = 25/243 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VA+K + ++V D E++ L+ +RHP++++ + +++V EY
Sbjct: 29 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AG 87
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
+L Y+ Q+ + A +F I + Y H ++ I+HRDL+P N+L D+ ++K+
Sbjct: 88 NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKI 144
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEY-DTKVDVFSFALILQEMIE 350
ADFGLS ++ N +K +C S YAAPEV + Y +VDV+S +IL M+
Sbjct: 145 ADFGLSNIMTDGNFLK----TSC--GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML- 197
Query: 351 GCPPFPTKQEKEVPKAY--IAN---ERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFR 405
C P E +P + I+N P F +P G LI+ P R +
Sbjct: 198 -CRRLPFDDE-SIPVLFKNISNGVYTLPKFLSP------GAAGLIKRMLIVNPLNRISIH 249
Query: 406 QIL 408
+I+
Sbjct: 250 EIM 252
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 124/253 (49%), Gaps = 34/253 (13%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VA+KT+ E E F++E +++++ +VV+ LG V+Q P +++ E + +G
Sbjct: 50 TRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 107
Query: 233 DLRAYLKQ---KGALKPTLA-------VKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
DL++YL+ + P LA ++ A +IA GM YL+ N+ +HRDL N +
Sbjct: 108 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCM 164
Query: 283 RDDSGHLKVADFGLSKLL----KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDV 338
+ +K+ DFG+++ + + K PV R+ +PE K+ + T DV
Sbjct: 165 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-------RWMSPESLKDGVFTTYSDV 217
Query: 339 FSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWS 395
+SF ++L E+ P+ ++V + + P P L EL+ CW
Sbjct: 218 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-----LFELMRMCWQ 272
Query: 396 EEPFRRPTFRQIL 408
P RP+F +I+
Sbjct: 273 YNPKMRPSFLEII 285
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 133/282 (47%), Gaps = 37/282 (13%)
Query: 144 EYEIDPKELDFSNSVEITKGTFRIASWRG------TQVAVKTLGEEVFTDEDKVKAFIDE 197
+YE D + V + KGT+ I + G ++A+K + E D + +E
Sbjct: 4 DYEYDEN----GDRVVLGKGTYGIV-YAGRDLSNQVRIAIKEIPER---DSRYSQPLHEE 55
Query: 198 LALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQK-GALK---PTLAVKFA 253
+AL + ++H N+VQ+LG+ +++ + I E +P G L A L+ K G LK T+ +
Sbjct: 56 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-YT 114
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDD-SGHLKVADFGLSKLLKFANTVKEDRPV 312
I G+ YLH+N+ I+HRD++ N+L + SG LK++DFG SK L N
Sbjct: 115 KQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-------- 163
Query: 313 TCEET---SWRYAAPEVYKN--EEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAY 367
C ET + +Y APE+ Y D++S + EM G PPF E +
Sbjct: 164 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK 223
Query: 368 IANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILM 409
+ + P + A + I C+ +P +R +L+
Sbjct: 224 VGMFKVHPEIPESMSAEA-KAFILKCFEPDPDKRACANDLLV 264
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 123/246 (50%), Gaps = 17/246 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 87 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 146
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 147 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 203
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG +K +K A P Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 204 TDFGFAKRVKGATWTLCGTP--------EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRL 411
PPF Q ++ + ++ + R P +H++ L++L+ + + +R F + +
Sbjct: 256 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNLLQVDLTKR--FGNLKNGV 309
Query: 412 DDISDQ 417
+DI +
Sbjct: 310 NDIKNH 315
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 125/256 (48%), Gaps = 40/256 (15%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VA+KT+ E E F++E +++++ +VV+ LG V+Q P +++ E + +G
Sbjct: 43 TRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 100
Query: 233 DLRAYLKQKGALKPTL-------------AVKFALDIARGMNYLHENRPEAIIHRDLEPS 279
DL++YL+ +L+P + ++ A +IA GM YL+ N+ +HRDL
Sbjct: 101 DLKSYLR---SLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAAR 154
Query: 280 NILRDDSGHLKVADFGLSKLL----KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
N + + +K+ DFG+++ + + K PV R+ +PE K+ + T
Sbjct: 155 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-------RWMSPESLKDGVFTTY 207
Query: 336 VDVFSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIED 392
DV+SF ++L E+ P+ ++V + + P P L EL+
Sbjct: 208 SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-----LFELMRM 262
Query: 393 CWSEEPFRRPTFRQIL 408
CW P RP+F +I+
Sbjct: 263 CWQYNPKMRPSFLEII 278
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 124/253 (49%), Gaps = 34/253 (13%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VA+KT+ E E F++E +++++ +VV+ LG V+Q P +++ E + +G
Sbjct: 49 TRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 106
Query: 233 DLRAYLKQ---KGALKPTLA-------VKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
DL++YL+ + P LA ++ A +IA GM YL+ N+ +HRDL N +
Sbjct: 107 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCM 163
Query: 283 RDDSGHLKVADFGLSKLL----KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDV 338
+ +K+ DFG+++ + + K PV R+ +PE K+ + T DV
Sbjct: 164 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-------RWMSPESLKDGVFTTYSDV 216
Query: 339 FSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWS 395
+SF ++L E+ P+ ++V + + P P L EL+ CW
Sbjct: 217 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-----LFELMRMCWQ 271
Query: 396 EEPFRRPTFRQIL 408
P RP+F +I+
Sbjct: 272 YNPKMRPSFLEII 284
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 121/259 (46%), Gaps = 29/259 (11%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ--STPMMIVTEYL 229
G VAVK L + D+ + F E+ +L+ + +V++ G + +V EYL
Sbjct: 52 GALVAVKQLQH---SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 108
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR +L + + L + + ++ I +GM YL R +HRDL NIL + H
Sbjct: 109 PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAH 165
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEM 348
+K+ADFGL+KLL R W APE + + + DV+SF ++L E+
Sbjct: 166 VKIADFGLAKLLPLDKDYYVVREPGQSPIFW--YAPESLSDNIFSRQSDVWSFGVVLYEL 223
Query: 349 IEGC--PPFPTKQ-------EKEVP------KAYIANERPPFRAPTTHYAYGLRELIEDC 393
C P+ + E++VP + +R P AP A + EL++ C
Sbjct: 224 FTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLP--APPACPA-EVHELMKLC 280
Query: 394 WSEEPFRRPTFRQILMRLD 412
W+ P RP+F + +LD
Sbjct: 281 WAPSPQDRPSFSALGPQLD 299
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 134/289 (46%), Gaps = 23/289 (7%)
Query: 126 GAKPSTAPMHVQNAREVPEYEIDPKELD-FSNSVEITKGTF----RIASWRGTQV-AVKT 179
G+ P +AP+ +E+P+ +DP+ + + + KG F I +V A K
Sbjct: 4 GSDPKSAPL-----KEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKV 58
Query: 180 LGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK 239
+ + + + + E+A+ + + +P+VV F G + +V E + L K
Sbjct: 59 VPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHK 118
Query: 240 QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKL 299
++ A+ A F +G+ YLH NR +IHRDL+ N+ +D +K+ DFGL+
Sbjct: 119 RRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATK 175
Query: 300 LKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQ 359
++F K+D C + Y APEV + + +VD++S IL ++ G PPF T
Sbjct: 176 IEFDGERKKD---LC--GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 230
Query: 360 EKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
KE YI ++ + P H LI +P RP+ ++L
Sbjct: 231 LKE---TYIRIKKNEYSVP-RHINPVASALIRRMLHADPTLRPSVAELL 275
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 124/253 (49%), Gaps = 34/253 (13%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VA+KT+ E E F++E +++++ +VV+ LG V+Q P +++ E + +G
Sbjct: 47 TRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 104
Query: 233 DLRAYLKQ---KGALKPTLA-------VKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
DL++YL+ + P LA ++ A +IA GM YL+ N+ +HRDL N +
Sbjct: 105 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCM 161
Query: 283 RDDSGHLKVADFGLSKLL----KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDV 338
+ +K+ DFG+++ + + K PV R+ +PE K+ + T DV
Sbjct: 162 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-------RWMSPESLKDGVFTTYSDV 214
Query: 339 FSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWS 395
+SF ++L E+ P+ ++V + + P P L EL+ CW
Sbjct: 215 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-----LFELMRMCWQ 269
Query: 396 EEPFRRPTFRQIL 408
P RP+F +I+
Sbjct: 270 YNPKMRPSFLEII 282
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 124/253 (49%), Gaps = 34/253 (13%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VA+KT+ E E F++E +++++ +VV+ LG V+Q P +++ E + +G
Sbjct: 78 TRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 135
Query: 233 DLRAYLKQ---KGALKPTLA-------VKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
DL++YL+ + P LA ++ A +IA GM YL+ N+ +HRDL N +
Sbjct: 136 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCM 192
Query: 283 RDDSGHLKVADFGLSKLL----KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDV 338
+ +K+ DFG+++ + + K PV R+ +PE K+ + T DV
Sbjct: 193 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-------RWMSPESLKDGVFTTYSDV 245
Query: 339 FSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWS 395
+SF ++L E+ P+ ++V + + P P L EL+ CW
Sbjct: 246 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-----LFELMRMCWQ 300
Query: 396 EEPFRRPTFRQIL 408
P RP+F +I+
Sbjct: 301 YNPKMRPSFLEII 313
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 124/253 (49%), Gaps = 34/253 (13%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VA+KT+ E E F++E +++++ +VV+ LG V+Q P +++ E + +G
Sbjct: 49 TRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 106
Query: 233 DLRAYLKQ---KGALKPTLA-------VKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
DL++YL+ + P LA ++ A +IA GM YL+ N+ +HRDL N +
Sbjct: 107 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCM 163
Query: 283 RDDSGHLKVADFGLSKLL----KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDV 338
+ +K+ DFG+++ + + K PV R+ +PE K+ + T DV
Sbjct: 164 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-------RWMSPESLKDGVFTTYSDV 216
Query: 339 FSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWS 395
+SF ++L E+ P+ ++V + + P P L EL+ CW
Sbjct: 217 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-----LFELMRMCWQ 271
Query: 396 EEPFRRPTFRQIL 408
P RP+F +I+
Sbjct: 272 YNPKMRPSFLEII 284
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 123/259 (47%), Gaps = 29/259 (11%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLG-AVTQSTP-MMIVTEYL 229
G VAVK L + D+ + F E+ +L+ + +V++ G + P + +V EYL
Sbjct: 36 GALVAVKQLQH---SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYL 92
Query: 230 PKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR +L + + L + + ++ I +GM YL R +HRDL NIL + H
Sbjct: 93 PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAH 149
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEM 348
+K+ADFGL+KLL R W APE + + + DV+SF ++L E+
Sbjct: 150 VKIADFGLAKLLPLDKDXXVVREPGQSPIFW--YAPESLSDNIFSRQSDVWSFGVVLYEL 207
Query: 349 IEGC--PPFPTKQ-------EKEVP------KAYIANERPPFRAPTTHYAYGLRELIEDC 393
C P+ + E++VP + +R P AP A + EL++ C
Sbjct: 208 FTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLP--APPACPA-EVHELMKLC 264
Query: 394 WSEEPFRRPTFRQILMRLD 412
W+ P RP+F + +LD
Sbjct: 265 WAPSPQDRPSFSALGPQLD 283
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 29/259 (11%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS--TPMMIVTEYL 229
G VAVK L + D+ + F E+ +L+ + +V++ G + +V EYL
Sbjct: 40 GALVAVKQLQH---SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 96
Query: 230 PKGDLRAYLKQKGA-LKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
P G LR +L++ A L + + ++ I +GM YL R +HRDL NIL + H
Sbjct: 97 PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAH 153
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEM 348
+K+ADFGL+KLL R W APE + + + DV+SF ++L E+
Sbjct: 154 VKIADFGLAKLLPLDKDYYVVREPGQSPIFW--YAPESLSDNIFSRQSDVWSFGVVLYEL 211
Query: 349 IEGC--PPFPTKQ-------EKEVP------KAYIANERPPFRAPTTHYAYGLRELIEDC 393
C P+ + E++VP + +R P AP A + EL++ C
Sbjct: 212 FTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLP--APPACPA-EVHELMKLC 268
Query: 394 WSEEPFRRPTFRQILMRLD 412
W+ P RP+F + +LD
Sbjct: 269 WAPSPQDRPSFSALGPQLD 287
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N++ D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 31/303 (10%)
Query: 129 PSTAPMHVQNAREVPEYEI--DPKELDFSNSVEITKGTFRIASWRG----------TQVA 176
P+T ++ Q + E P + KE +F + G F ++G VA
Sbjct: 15 PTTENLYFQGSGEAPNQALLRILKETEFKKIKVLGSGAFGTV-YKGLWIPEGEKVKIPVA 73
Query: 177 VKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRA 236
+K L E T K +DE ++ + +P+V + LG ST + ++T+ +P G L
Sbjct: 74 IKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLD 130
Query: 237 YLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFG 295
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ DFG
Sbjct: 131 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 187
Query: 296 LSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GC 352
L+KLL E++ E + ++ A E + Y + DV+S+ + + E++ G
Sbjct: 188 LAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 242
Query: 353 PPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLD 412
P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 243 KPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIEFS 299
Query: 413 DIS 415
++
Sbjct: 300 KMA 302
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY P
Sbjct: 66 GNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N++ D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFGL+K +K P Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFGLAKRVKGRTWXLCGTP--------EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 128/253 (50%), Gaps = 34/253 (13%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VA+KT+ E E +++ F++E +++++ +VV+ LG V+Q P +++ E + +G
Sbjct: 56 TRVAIKTVNEAASMRE-RIE-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 113
Query: 233 DLRAYLKQ---KGALKPTLA-------VKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
DL++YL+ + P LA ++ A +IA GM YL+ N+ +HRDL N +
Sbjct: 114 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCM 170
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKED----RPVTCEETSWRYAAPEVYKNEEYDTKVDV 338
+ +K+ DFG+++ + + ++ PV R+ +PE K+ + T DV
Sbjct: 171 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-------RWMSPESLKDGVFTTYSDV 223
Query: 339 FSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWS 395
+SF ++L E+ P+ ++V + + P P L EL+ CW
Sbjct: 224 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-----LFELMRMCWQ 278
Query: 396 EEPFRRPTFRQIL 408
P RP+F +I+
Sbjct: 279 YNPKMRPSFLEII 291
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 7/186 (3%)
Query: 188 EDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPT 247
E+ +K F E+ ++ H N+V + + +V EY+ L Y++ G L
Sbjct: 52 EETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVD 111
Query: 248 LAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVK 307
A+ F I G+ + H+ R I+HRD++P NIL D + LK+ DFG++K L + +
Sbjct: 112 TAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168
Query: 308 EDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAY 367
+ + + +Y +PE K E D D++S ++L EM+ G PPF + + +
Sbjct: 169 TNHVL----GTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH 224
Query: 368 IANERP 373
I + P
Sbjct: 225 IQDSVP 230
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 53 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 112
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D+ G+++V
Sbjct: 113 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQV 169
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 170 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 222 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 259
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL 121
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 122 ANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWS-----VHAPSSRRTTLC-- 171
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE---TYRRISRVEFT 228
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI +R T ++L
Sbjct: 229 FP-DFVTEGARDLISRLLKHNASQRLTLAEVL 259
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 111/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P + + + ++ + +V EY P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPG 126
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N++ D G++KV
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 184 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 236 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 273
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 111/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P + + + ++ + +V EY P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPG 126
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N++ D G++KV
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 184 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 236 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 273
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 111/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P + + + ++ + +V EY P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPG 126
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N++ D G++KV
Sbjct: 127 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 184 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 236 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 273
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 34/258 (13%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVKT+ E E +++ F++E ++++ +VV+ LG V++ P ++V E + G
Sbjct: 48 TRVAVKTVNESASLRE-RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 233 DLRAYLK--------QKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
DL++YL+ G PTL ++ A +IA GM YL+ + +HRDL N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCM 162
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDR----PVTCEETSWRYAAPEVYKNEEYDTKVDV 338
+K+ DFG+++ + + ++ PV R+ APE K+ + T D+
Sbjct: 163 VAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV-------RWMAPESLKDGVFTTSSDM 215
Query: 339 FSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWS 395
+SF ++L E+ P+ ++V K + P P + +L+ CW
Sbjct: 216 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER-----VTDLMRMCWQ 270
Query: 396 EEPFRRPTFRQILMRLDD 413
P RPTF +I+ L D
Sbjct: 271 FNPNMRPTFLEIVNLLKD 288
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 34/258 (13%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVKT+ E E F++E ++++ +VV+ LG V++ P ++V E + G
Sbjct: 45 TRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 102
Query: 233 DLRAYLK--------QKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
DL++YL+ G PTL ++ A +IA GM YL+ + +HRDL N +
Sbjct: 103 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCM 159
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDR----PVTCEETSWRYAAPEVYKNEEYDTKVDV 338
+K+ DFG+++ + + ++ PV R+ APE K+ + T D+
Sbjct: 160 VAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV-------RWMAPESLKDGVFTTSSDM 212
Query: 339 FSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWS 395
+SF ++L E+ P+ ++V K + P P + +L+ CW
Sbjct: 213 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER-----VTDLMRMCWQ 267
Query: 396 EEPFRRPTFRQILMRLDD 413
P RPTF +I+ L D
Sbjct: 268 FNPKMRPTFLEIVNLLKD 285
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 34/253 (13%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VA+KT+ E E F++E +++++ +VV+ LG V+Q P +++ E + +G
Sbjct: 43 TRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 100
Query: 233 DLRAYLKQ---KGALKPTLA-------VKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
DL++YL+ + P LA ++ A +IA GM YL+ N+ +HRDL N
Sbjct: 101 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCX 157
Query: 283 RDDSGHLKVADFGLSKLL----KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDV 338
+ +K+ DFG+++ + + K PV R+ +PE K+ + T DV
Sbjct: 158 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-------RWMSPESLKDGVFTTYSDV 210
Query: 339 FSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWS 395
+SF ++L E+ P+ ++V + + P P L EL+ CW
Sbjct: 211 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-----LLELMRMCWQ 265
Query: 396 EEPFRRPTFRQIL 408
P RP+F +I+
Sbjct: 266 YNPKMRPSFLEII 278
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ + +RHPN+++ G +T + ++ EY P G + L++ + ++
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL 121
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
A ++Y H R +IHRD++P N+L +G LK+ADFG S + R C
Sbjct: 122 ANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWS-----VHAPSSRRDTLC-- 171
Query: 317 TSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFR 376
+ Y PE+ + +D KVD++S ++ E + G PPF +E Y R F
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE---TYRRISRVEFT 228
Query: 377 APTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P G R+LI +R T ++L
Sbjct: 229 FP-DFVTEGARDLISRLLKHNASQRLTLAEVL 259
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 16/237 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G VA+K + D I E+ LL+++ HPNV+++ + + + IV E
Sbjct: 57 GVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA 116
Query: 232 GDL----RAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSG 287
GDL + + KQK + K+ + + + ++H R ++HRD++P+N+ +G
Sbjct: 117 GDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATG 173
Query: 288 HLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQE 347
+K+ D GL + T T Y +PE Y+ K D++S +L E
Sbjct: 174 VVKLGDLGLGRFFSSKTTAAHSLVGT-----PYYMSPERIHENGYNFKSDIWSLGCLLYE 228
Query: 348 MIEGCPPFPTKQEK--EVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRP 402
M PF + + K + PP P+ HY+ LR+L+ C + +P +RP
Sbjct: 229 MAALQSPFYGDKMNLYSLCKKIEQCDYPPL--PSDHYSEELRQLVNMCINPDPEKRP 283
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 11/192 (5%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L + D+V+ + E +L + HP VV+ A + ++ ++L
Sbjct: 56 GHLYAMKVLKKATLKVRDRVRTKM-ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRG 114
Query: 232 GDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
GDL L K + VKF L ++A G+++LH II+RDL+P NIL D+ GH+K
Sbjct: 115 GDLFTRL-SKEVMFTEEDVKFYLAELALGLDHLHSL---GIIYRDLKPENILLDEEGHIK 170
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE 350
+ DFGLSK + ++ + Y APEV + + D +S+ +++ EM+
Sbjct: 171 LTDFGLSK-----EAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLT 225
Query: 351 GCPPFPTKQEKE 362
G PF K KE
Sbjct: 226 GSLPFQGKDRKE 237
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 34/258 (13%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVKT+ E E F++E ++++ +VV+ LG V++ P ++V E + G
Sbjct: 48 TRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 233 DLRAYLK--------QKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
DL++YL+ G PTL ++ A +IA GM YL+ + +HRDL N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCM 162
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDR----PVTCEETSWRYAAPEVYKNEEYDTKVDV 338
+K+ DFG+++ + + ++ PV R+ APE K+ + T D+
Sbjct: 163 VAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV-------RWMAPESLKDGVFTTSSDM 215
Query: 339 FSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWS 395
+SF ++L E+ P+ ++V K + P P + +L+ CW
Sbjct: 216 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER-----VTDLMRMCWQ 270
Query: 396 EEPFRRPTFRQILMRLDD 413
P RPTF +I+ L D
Sbjct: 271 FNPKMRPTFLEIVNLLKD 288
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++T+ +P G L
Sbjct: 47 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCL 103
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 104 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 160
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 161 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 216 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMRKCWMIDADSRPKFRELIIE 272
Query: 411 LDDIS 415
++
Sbjct: 273 FSKMA 277
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++T+ +P G L
Sbjct: 50 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCL 106
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 107 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 163
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 164 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 219 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMRKCWMIDADSRPKFRELIIE 275
Query: 411 LDDIS 415
++
Sbjct: 276 FSKMA 280
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 122/246 (49%), Gaps = 17/246 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 87 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 146
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 147 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 203
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 204 TDFG------FAKRVKGRTWXLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRL 411
PPF Q ++ + ++ + R P +H++ L++L+ + + +R F + +
Sbjct: 256 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNLLQVDLTKR--FGNLKNGV 309
Query: 412 DDISDQ 417
+DI +
Sbjct: 310 NDIKNH 315
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 151/346 (43%), Gaps = 47/346 (13%)
Query: 38 RVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTA----LHVAACQ--------GRTDV 85
R R + N+G G KE +D+D+R A VA CQ T +
Sbjct: 26 RPRYFLLKNDGTFIGYKE--------RPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFI 77
Query: 86 VRLL-----LSRGADVD-PEDR--WGST--PLADAVYYKHHDVIKLLEEHGAKPSTAP-M 134
+R L + R V+ PE+R W + +AD + + + + + S A M
Sbjct: 78 IRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKKQEEEEMDFRSGSPSDNSGAEEM 137
Query: 135 HVQNAREVPEYEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDED 189
V A+ P++ + E ++ + KGTF G A+K L +EV +D
Sbjct: 138 EVSLAK--PKHRVTMNEFEYLKL--LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKD 193
Query: 190 KVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLA 249
+V + E +LQ RHP + + + V EY G+L +L ++ A
Sbjct: 194 EVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA 253
Query: 250 VKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKED 309
+ +I ++YLH + +++RDL+ N++ D GH+K+ DFGL K +K+
Sbjct: 254 RFYGAEIVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCK-----EGIKDG 306
Query: 310 RPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF 355
+ + Y APEV ++ +Y VD + +++ EM+ G PF
Sbjct: 307 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 111/250 (44%), Gaps = 16/250 (6%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ +G + S + VAVK L +V + + + FI E+ + + H N+++ G V +
Sbjct: 34 VRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-T 92
Query: 220 TPMMIVTEYLPKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEP 278
PM +VTE P G L L K +G ++A+ +A GM YL R IHRDL
Sbjct: 93 PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAA 149
Query: 279 SNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKV 336
N+L +K+ DFGL + L +D V E + + + APE K +
Sbjct: 150 RNLLLATRDLVKIGDFGLMRALP----QNDDHXVMQEHRKVPFAWCAPESLKTRTFSHAS 205
Query: 337 DVFSFALILQEMIE-GCPPFPTKQEKEV-PKAYIANERPPFRAPTTHYAYGLRELIEDCW 394
D + F + L EM G P+ ++ K ER P Y ++ CW
Sbjct: 206 DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY---NVMVQCW 262
Query: 395 SEEPFRRPTF 404
+ +P RPTF
Sbjct: 263 AHKPEDRPTF 272
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++T+ +P G L
Sbjct: 57 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCL 113
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 114 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 170
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 171 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 225
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 226 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMRKCWMIDADSRPKFRELIIE 282
Query: 411 LDDIS 415
++
Sbjct: 283 FSKMA 287
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 126
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 184 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 236 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 273
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG +K +K P Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFGFAKRVKGRTWXLXGTP--------EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 112/221 (50%), Gaps = 15/221 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIED 392
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRN 271
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 10/222 (4%)
Query: 188 EDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG-ALKP 246
E ++ I E++++Q+ P+VV++ G+ ++T + IV EY G + ++ + L
Sbjct: 65 ESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTE 124
Query: 247 TLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTV 306
+G+ YLH R IHRD++ NIL + GH K+ADFG++ L
Sbjct: 125 DEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQL---TDX 178
Query: 307 KEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKA 366
R W APEV + Y+ D++S + EM EG PP+
Sbjct: 179 MAKRNXVIGTPFW--MAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFM 236
Query: 367 YIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
N P FR P ++ + ++ C + P +R T Q+L
Sbjct: 237 IPTNPPPTFRKPEL-WSDNFTDFVKQCLVKSPEQRATATQLL 277
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++T+ +P G L
Sbjct: 47 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGXL 103
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 104 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 160
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 161 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 216 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 272
Query: 411 LDDIS 415
++
Sbjct: 273 FSKMA 277
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 112/251 (44%), Gaps = 18/251 (7%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ +G + S + VAVK L +V + + + FI E+ + + H N+++ G V +
Sbjct: 28 VRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-T 86
Query: 220 TPMMIVTEYLPKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEP 278
PM +VTE P G L L K +G ++A+ +A GM YL R IHRDL
Sbjct: 87 PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAA 143
Query: 279 SNILRDDSGHLKVADFGLSKLLKFAN---TVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
N+L +K+ DFGL + L + ++E R V + + APE K +
Sbjct: 144 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-----PFAWCAPESLKTRTFSHA 198
Query: 336 VDVFSFALILQEMIE-GCPPFPTKQEKEV-PKAYIANERPPFRAPTTHYAYGLRELIEDC 393
D + F + L EM G P+ ++ K ER P Y ++ C
Sbjct: 199 SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY---NVMVQC 255
Query: 394 WSEEPFRRPTF 404
W+ +P RPTF
Sbjct: 256 WAHKPEDRPTF 266
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 61 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 120
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 121 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 177
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 178 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 230 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 267
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 112/251 (44%), Gaps = 18/251 (7%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ +G + S + VAVK L +V + + + FI E+ + + H N+++ G V +
Sbjct: 34 VRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-T 92
Query: 220 TPMMIVTEYLPKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEP 278
PM +VTE P G L L K +G ++A+ +A GM YL R IHRDL
Sbjct: 93 PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAA 149
Query: 279 SNILRDDSGHLKVADFGLSKLLKFAN---TVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
N+L +K+ DFGL + L + ++E R V + + APE K +
Sbjct: 150 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-----PFAWCAPESLKTRTFSHA 204
Query: 336 VDVFSFALILQEMIE-GCPPFPTKQEKEV-PKAYIANERPPFRAPTTHYAYGLRELIEDC 393
D + F + L EM G P+ ++ K ER P Y ++ C
Sbjct: 205 SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY---NVMVQC 261
Query: 394 WSEEPFRRPTF 404
W+ +P RPTF
Sbjct: 262 WAHKPEDRPTF 272
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG +K +K P Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFGFAKRVKGRTWXLAGTP--------EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++T+ +P G L
Sbjct: 49 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCL 105
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 106 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 162
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 163 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 218 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 274
Query: 411 LDDIS 415
++
Sbjct: 275 FSKMA 279
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 11/186 (5%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM----MIVTEYLP 230
VAVK L ++ D F E + HP +V TP IV EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 231 KGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
LR + +G + P A++ D + +N+ H+N IIHRD++P+NIL + +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANILISATNAVK 156
Query: 291 VADFGLSKLLK-FANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMI 349
V DFG+++ + N+V + V + +Y +PE + + D + DV+S +L E++
Sbjct: 157 VVDFGIARAIADSGNSVXQTAAVIG---TAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213
Query: 350 EGCPPF 355
G PPF
Sbjct: 214 TGEPPF 219
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++T+ +P G L
Sbjct: 50 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCL 106
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 107 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 163
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 164 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 219 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 275
Query: 411 LDDIS 415
++
Sbjct: 276 FSKMA 280
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 134/293 (45%), Gaps = 23/293 (7%)
Query: 127 AKPSTAP-MHVQNA----REVPEYEIDPKELD-FSNSVEITKGTF----RIASWRGTQV- 175
AKPS P HV +E+P+ +DP+ + + + KG F I +V
Sbjct: 11 AKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVF 70
Query: 176 AVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLR 235
A K + + + + + E+A+ + + +P+VV F G + +V E + L
Sbjct: 71 AGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL 130
Query: 236 AYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFG 295
K++ A+ A F +G+ YLH NR +IHRDL+ N+ +D +K+ DFG
Sbjct: 131 ELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFG 187
Query: 296 LSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF 355
L+ ++F K+D C + Y APEV + + +VD++S IL ++ G PPF
Sbjct: 188 LATKIEFDGERKKD---LC--GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Query: 356 PTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
T KE YI ++ + P H LI +P RP+ ++L
Sbjct: 243 ETSCLKE---TYIRIKKNEYSVP-RHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++T+ +P G L
Sbjct: 53 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCL 109
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 110 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 166
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 167 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 221
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 222 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 278
Query: 411 LDDIS 415
++
Sbjct: 279 FSKMA 283
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++T+ +P G L
Sbjct: 54 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCL 110
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 111 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 167
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 168 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 223 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 279
Query: 411 LDDIS 415
++
Sbjct: 280 FSKMA 284
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 112/251 (44%), Gaps = 18/251 (7%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ +G + S + VAVK L +V + + + FI E+ + + H N+++ G V +
Sbjct: 28 VRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-T 86
Query: 220 TPMMIVTEYLPKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEP 278
PM +VTE P G L L K +G ++A+ +A GM YL R IHRDL
Sbjct: 87 PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAA 143
Query: 279 SNILRDDSGHLKVADFGLSKLLKFAN---TVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
N+L +K+ DFGL + L + ++E R V + + APE K +
Sbjct: 144 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-----PFAWCAPESLKTRTFSHA 198
Query: 336 VDVFSFALILQEMIE-GCPPFPTKQEKEV-PKAYIANERPPFRAPTTHYAYGLRELIEDC 393
D + F + L EM G P+ ++ K ER P Y ++ C
Sbjct: 199 SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY---NVMVQC 255
Query: 394 WSEEPFRRPTF 404
W+ +P RPTF
Sbjct: 256 WAHKPEDRPTF 266
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 18/232 (7%)
Query: 134 MHVQNAREVPEYEIDPKELDFSNSVEITKGTF------RIASWRGTQVAVKTLGEEVFTD 187
+H+ + E+ +FSN + +G F R+A GT VAVK L EE
Sbjct: 20 VHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD--GTLVAVKRLKEE--RX 75
Query: 188 EDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPT 247
+ F E+ ++ H N+++ G T ++V Y+ G + + L+++ +P
Sbjct: 76 QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP 135
Query: 248 L----AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFA 303
L + AL ARG+ YLH++ IIHRD++ +NIL D+ V DFGL+KL+ +
Sbjct: 136 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY- 194
Query: 304 NTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF 355
K+ + + APE + K DVF + ++L E+I G F
Sbjct: 195 ---KDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 34/258 (13%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVKT+ E E F++E ++++ +VV+ LG V++ P ++V E + G
Sbjct: 47 TRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 104
Query: 233 DLRAYLK--------QKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
DL++YL+ G PTL ++ A +IA GM YL+ + +HRDL N +
Sbjct: 105 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCM 161
Query: 283 RDDSGHLKVADFGLSKLL----KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDV 338
+K+ DFG+++ + + K PV R+ APE K+ + T D+
Sbjct: 162 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-------RWMAPESLKDGVFTTSSDM 214
Query: 339 FSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWS 395
+SF ++L E+ P+ ++V K + P P + +L+ CW
Sbjct: 215 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER-----VTDLMRMCWQ 269
Query: 396 EEPFRRPTFRQILMRLDD 413
P RPTF +I+ L D
Sbjct: 270 FNPKMRPTFLEIVNLLKD 287
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++T+ +P G L
Sbjct: 54 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCL 110
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 111 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 167
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 168 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 223 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 279
Query: 411 LDDIS 415
++
Sbjct: 280 FSKMA 284
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 112/251 (44%), Gaps = 18/251 (7%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ +G + S + VAVK L +V + + + FI E+ + + H N+++ G V +
Sbjct: 24 VRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-T 82
Query: 220 TPMMIVTEYLPKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEP 278
PM +VTE P G L L K +G ++A+ +A GM YL R IHRDL
Sbjct: 83 PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAA 139
Query: 279 SNILRDDSGHLKVADFGLSKLLKFAN---TVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
N+L +K+ DFGL + L + ++E R V + + APE K +
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-----PFAWCAPESLKTRTFSHA 194
Query: 336 VDVFSFALILQEMIE-GCPPFPTKQEKEV-PKAYIANERPPFRAPTTHYAYGLRELIEDC 393
D + F + L EM G P+ ++ K ER P Y ++ C
Sbjct: 195 SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY---NVMVQC 251
Query: 394 WSEEPFRRPTF 404
W+ +P RPTF
Sbjct: 252 WAHKPEDRPTF 262
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++T+ +P G L
Sbjct: 50 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCL 106
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 107 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 163
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 164 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 219 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 275
Query: 411 LDDIS 415
++
Sbjct: 276 FSKMA 280
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 112/251 (44%), Gaps = 18/251 (7%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ +G + S + VAVK L +V + + + FI E+ + + H N+++ G V +
Sbjct: 24 VRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-T 82
Query: 220 TPMMIVTEYLPKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEP 278
PM +VTE P G L L K +G ++A+ +A GM YL R IHRDL
Sbjct: 83 PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAA 139
Query: 279 SNILRDDSGHLKVADFGLSKLLKFAN---TVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
N+L +K+ DFGL + L + ++E R V + + APE K +
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-----PFAWCAPESLKTRTFSHA 194
Query: 336 VDVFSFALILQEMIE-GCPPFPTKQEKEV-PKAYIANERPPFRAPTTHYAYGLRELIEDC 393
D + F + L EM G P+ ++ K ER P Y ++ C
Sbjct: 195 SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY---NVMVQC 251
Query: 394 WSEEPFRRPTF 404
W+ +P RPTF
Sbjct: 252 WAHKPEDRPTF 262
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 111/250 (44%), Gaps = 16/250 (6%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
+ +G + S + VAVK L +V + + + FI E+ + + H N+++ G V +
Sbjct: 24 VRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-T 82
Query: 220 TPMMIVTEYLPKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEP 278
PM +VTE P G L L K +G ++A+ +A GM YL R IHRDL
Sbjct: 83 PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAA 139
Query: 279 SNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKV 336
N+L +K+ DFGL + L +D V E + + + APE K +
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALP----QNDDHXVMQEHRKVPFAWCAPESLKTRTFSHAS 195
Query: 337 DVFSFALILQEMIE-GCPPFPTKQEKEV-PKAYIANERPPFRAPTTHYAYGLRELIEDCW 394
D + F + L EM G P+ ++ K ER P Y ++ CW
Sbjct: 196 DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY---NVMVQCW 252
Query: 395 SEEPFRRPTF 404
+ +P RPTF
Sbjct: 253 AHKPEDRPTF 262
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++T+ +P G L
Sbjct: 41 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCL 97
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 98 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 154
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 155 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 209
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 210 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 266
Query: 411 LDDIS 415
++
Sbjct: 267 FSKMA 271
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 34/258 (13%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVKT+ E E F++E ++++ +VV+ LG V++ P ++V E + G
Sbjct: 48 TRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 233 DLRAYLK--------QKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
DL++YL+ G PTL ++ A +IA GM YL+ + +HRDL N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCM 162
Query: 283 RDDSGHLKVADFGLSKLL----KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDV 338
+K+ DFG+++ + + K PV R+ APE K+ + T D+
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV-------RWMAPESLKDGVFTTSSDM 215
Query: 339 FSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWS 395
+SF ++L E+ P+ ++V K + P P + +L+ CW
Sbjct: 216 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER-----VTDLMRMCWQ 270
Query: 396 EEPFRRPTFRQILMRLDD 413
P RPTF +I+ L D
Sbjct: 271 FNPKMRPTFLEIVNLLKD 288
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 34/258 (13%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVKT+ E E F++E ++++ +VV+ LG V++ P ++V E + G
Sbjct: 48 TRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 233 DLRAYLK--------QKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
DL++YL+ G PTL ++ A +IA GM YL+ + +HRDL N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCM 162
Query: 283 RDDSGHLKVADFGLSKLL----KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDV 338
+K+ DFG+++ + + K PV R+ APE K+ + T D+
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-------RWMAPESLKDGVFTTSSDM 215
Query: 339 FSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWS 395
+SF ++L E+ P+ ++V K + P P + +L+ CW
Sbjct: 216 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER-----VTDLMRMCWQ 270
Query: 396 EEPFRRPTFRQILMRLDD 413
P RPTF +I+ L D
Sbjct: 271 FNPKMRPTFLEIVNLLKD 288
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++T+ +P G L
Sbjct: 47 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCL 103
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 104 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 160
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 161 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 216 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 272
Query: 411 LDDIS 415
++
Sbjct: 273 FSKMA 277
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++T+ +P G L
Sbjct: 47 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCL 103
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 104 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 160
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 161 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 216 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 272
Query: 411 LDDIS 415
++
Sbjct: 273 FSKMA 277
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 28/274 (10%)
Query: 147 IDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELA----LLQ 202
++ KEL N + KG +++ VKT+ ++ +E A DEL ++Q
Sbjct: 8 LEDKELGSGNFGTVKKGYYQMKK------VVKTVAVKILKNEANDPALKDELLAEANVMQ 61
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNY 262
++ +P +V+ +G + ++ M+V E G L YL+Q +K ++ ++ GM Y
Sbjct: 62 QLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 120
Query: 263 LHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW--R 320
L E+ +HRDL N+L + K++DFGLSK L+ E+ W +
Sbjct: 121 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALR----ADENYYKAQTHGKWPVK 173
Query: 321 YAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRA 377
+ APE ++ +K DV+SF +++ E G P+ + EV ER P
Sbjct: 174 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 233
Query: 378 PTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRL 411
P Y +L+ CW+ + RP F + +RL
Sbjct: 234 PREMY-----DLMNLCWTYDVENRPGFAAVELRL 262
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 11/186 (5%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM----MIVTEYLP 230
VAVK L ++ D F E + HP +V TP IV EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVD 99
Query: 231 KGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
LR + +G + P A++ D + +N+ H+N IIHRD++P+NI+ + +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVK 156
Query: 291 VADFGLSKLLK-FANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMI 349
V DFG+++ + N+V + V + +Y +PE + + D + DV+S +L E++
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIG---TAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213
Query: 350 EGCPPF 355
G PPF
Sbjct: 214 TGEPPF 219
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 87/164 (53%), Gaps = 11/164 (6%)
Query: 195 IDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVK-FA 253
I E++LL+ ++H N+V + + +V EYL K DL+ YL G + VK F
Sbjct: 48 IREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFL 106
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVT 313
+ RG+ Y H + ++HRDL+P N+L ++ G LK+ADFGL++ ++ VT
Sbjct: 107 FQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVT 163
Query: 314 CEETSWRYAAPEV-YKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
W Y P++ + +Y T++D++ I EM G P FP
Sbjct: 164 L----W-YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFP 202
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N++ D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 28/274 (10%)
Query: 147 IDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELA----LLQ 202
++ KEL N + KG +++ VKT+ ++ +E A DEL ++Q
Sbjct: 14 LEDKELGSGNFGTVKKGYYQMKK------VVKTVAVKILKNEANDPALKDELLAEANVMQ 67
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNY 262
++ +P +V+ +G + ++ M+V E G L YL+Q +K ++ ++ GM Y
Sbjct: 68 QLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 126
Query: 263 LHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW--R 320
L E+ +HRDL N+L + K++DFGLSK L+ E+ W +
Sbjct: 127 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALR----ADENXYKAQTHGKWPVK 179
Query: 321 YAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRA 377
+ APE ++ +K DV+SF +++ E G P+ + EV ER P
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 239
Query: 378 PTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRL 411
P Y +L+ CW+ + RP F + +RL
Sbjct: 240 PREMY-----DLMNLCWTYDVENRPGFAAVELRL 268
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 28/274 (10%)
Query: 147 IDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELA----LLQ 202
++ KEL N + KG +++ VKT+ ++ +E A DEL ++Q
Sbjct: 14 LEDKELGSGNFGTVKKGYYQMKK------VVKTVAVKILKNEANDPALKDELLAEANVMQ 67
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNY 262
++ +P +V+ +G + ++ M+V E G L YL+Q +K ++ ++ GM Y
Sbjct: 68 QLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 126
Query: 263 LHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW--R 320
L E+ +HRDL N+L + K++DFGLSK L+ E+ W +
Sbjct: 127 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALR----ADENYYKAQTHGKWPVK 179
Query: 321 YAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRA 377
+ APE ++ +K DV+SF +++ E G P+ + EV ER P
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 239
Query: 378 PTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRL 411
P Y +L+ CW+ + RP F + +RL
Sbjct: 240 PREMY-----DLMNLCWTYDVENRPGFAAVELRL 268
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 28/276 (10%)
Query: 147 IDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDEL----ALLQ 202
++ KEL N + KG +++ VKT+ ++ +E A DEL ++Q
Sbjct: 373 LEDKELGSGNFGTVKKGYYQMKK------VVKTVAVKILKNEANDPALKDELLAEANVMQ 426
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNY 262
++ +P +V+ +G + ++ M+V E G L YL+Q +K ++ ++ GM Y
Sbjct: 427 QLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 485
Query: 263 LHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW--R 320
L E+ +HRDL N+L + K++DFGLSK L+ E+ W +
Sbjct: 486 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALR----ADENYYKAQTHGKWPVK 538
Query: 321 YAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRA 377
+ APE ++ +K DV+SF +++ E G P+ + EV ER P
Sbjct: 539 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 598
Query: 378 PTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDD 413
P Y +L+ CW+ + RP F + +RL +
Sbjct: 599 PREMY-----DLMNLCWTYDVENRPGFAAVELRLRN 629
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ +M G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 22/196 (11%)
Query: 195 IDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKF 252
++E +L+K+ VV A + +V + GDL+ ++ G AV +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPV 312
A +I G+ LH R I++RDL+P NIL DD GH++++D GL A V E + +
Sbjct: 292 AAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGL------AVHVPEGQTI 342
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQE-----------K 361
+ Y APEV KNE Y D ++ +L EMI G PF +++ K
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK 402
Query: 362 EVPKAYIANERPPFRA 377
EVP+ Y P R+
Sbjct: 403 EVPEEYSERFSPQARS 418
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 28/276 (10%)
Query: 147 IDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDEL----ALLQ 202
++ KEL N + KG +++ VKT+ ++ +E A DEL ++Q
Sbjct: 372 LEDKELGSGNFGTVKKGYYQMKK------VVKTVAVKILKNEANDPALKDELLAEANVMQ 425
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNY 262
++ +P +V+ +G + ++ M+V E G L YL+Q +K ++ ++ GM Y
Sbjct: 426 QLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 484
Query: 263 LHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW--R 320
L E+ +HRDL N+L + K++DFGLSK L+ E+ W +
Sbjct: 485 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALR----ADENYYKAQTHGKWPVK 537
Query: 321 YAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRA 377
+ APE ++ +K DV+SF +++ E G P+ + EV ER P
Sbjct: 538 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 597
Query: 378 PTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDD 413
P Y +L+ CW+ + RP F + +RL +
Sbjct: 598 PREMY-----DLMNLCWTYDVENRPGFAAVELRLRN 628
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 12/183 (6%)
Query: 176 AVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLR 235
A+K + ++ + ++V+ EL ++Q + HP +V + M +V + L GDLR
Sbjct: 44 AMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLR 103
Query: 236 AYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFG 295
+L+Q K F ++ ++YL R IIHRD++P NIL D+ GH+ + DF
Sbjct: 104 YHLQQNVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFN 160
Query: 296 LSKLLKFANTVKEDRPVTCEETSWRYAAPEVY---KNEEYDTKVDVFSFALILQEMIEGC 352
++ +L + +T + Y APE++ K Y VD +S + E++ G
Sbjct: 161 IAAML------PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
Query: 353 PPF 355
P+
Sbjct: 215 RPY 217
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 28/274 (10%)
Query: 147 IDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELA----LLQ 202
++ KEL N + KG +++ VKT+ ++ +E A DEL ++Q
Sbjct: 10 LEDKELGSGNFGTVKKGYYQMKK------VVKTVAVKILKNEANDPALKDELLAEANVMQ 63
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNY 262
++ +P +V+ +G + ++ M+V E G L YL+Q +K ++ ++ GM Y
Sbjct: 64 QLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 122
Query: 263 LHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW--R 320
L E+ +HRDL N+L + K++DFGLSK L+ E+ W +
Sbjct: 123 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALR----ADENYYKAQTHGKWPVK 175
Query: 321 YAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRA 377
+ APE ++ +K DV+SF +++ E G P+ + EV ER P
Sbjct: 176 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 235
Query: 378 PTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRL 411
P Y +L+ CW+ + RP F + +RL
Sbjct: 236 PREMY-----DLMNLCWTYDVENRPGFAAVELRL 264
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 11/186 (5%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM----MIVTEYLP 230
VAVK L ++ D F E + HP +V TP IV EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 231 KGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
LR + +G + P A++ D + +N+ H+N IIHRD++P+NI+ + +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVK 156
Query: 291 VADFGLSKLLK-FANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMI 349
V DFG+++ + N+V + V + +Y +PE + + D + DV+S +L E++
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIG---TAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213
Query: 350 EGCPPF 355
G PPF
Sbjct: 214 TGEPPF 219
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 22/196 (11%)
Query: 195 IDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKF 252
++E +L+K+ VV A + +V + GDL+ ++ G AV +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPV 312
A +I G+ LH R I++RDL+P NIL DD GH++++D GL A V E + +
Sbjct: 292 AAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGL------AVHVPEGQTI 342
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQE-----------K 361
+ Y APEV KNE Y D ++ +L EMI G PF +++ K
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK 402
Query: 362 EVPKAYIANERPPFRA 377
EVP+ Y P R+
Sbjct: 403 EVPEEYSERFSPQARS 418
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 11/186 (5%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM----MIVTEYLP 230
VAVK L ++ D F E + HP +V TP IV EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 231 KGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
LR + +G + P A++ D + +N+ H+N IIHRD++P+NI+ + +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVK 156
Query: 291 VADFGLSKLLK-FANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMI 349
V DFG+++ + N+V + V + +Y +PE + + D + DV+S +L E++
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIG---TAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213
Query: 350 EGCPPF 355
G PPF
Sbjct: 214 TGEPPF 219
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 28/274 (10%)
Query: 147 IDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELA----LLQ 202
++ KEL N + KG +++ VKT+ ++ +E A DEL ++Q
Sbjct: 20 LEDKELGSGNFGTVKKGYYQMKK------VVKTVAVKILKNEANDPALKDELLAEANVMQ 73
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNY 262
++ +P +V+ +G + ++ M+V E G L YL+Q +K ++ ++ GM Y
Sbjct: 74 QLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 132
Query: 263 LHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW--R 320
L E+ +HRDL N+L + K++DFGLSK L+ E+ W +
Sbjct: 133 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALR----ADENYYKAQTHGKWPVK 185
Query: 321 YAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRA 377
+ APE ++ +K DV+SF +++ E G P+ + EV ER P
Sbjct: 186 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 245
Query: 378 PTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRL 411
P Y +L+ CW+ + RP F + +RL
Sbjct: 246 PREMY-----DLMNLCWTYDVENRPGFAAVELRL 274
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 28/274 (10%)
Query: 147 IDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELA----LLQ 202
++ KEL N + KG +++ VKT+ ++ +E A DEL ++Q
Sbjct: 28 LEDKELGSGNFGTVKKGYYQMKK------VVKTVAVKILKNEANDPALKDELLAEANVMQ 81
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNY 262
++ +P +V+ +G + ++ M+V E G L YL+Q +K ++ ++ GM Y
Sbjct: 82 QLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 140
Query: 263 LHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW--R 320
L E+ +HRDL N+L + K++DFGLSK L+ E+ W +
Sbjct: 141 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALR----ADENYYKAQTHGKWPVK 193
Query: 321 YAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANER--PPFRA 377
+ APE ++ +K DV+SF +++ E G P+ + EV ER P
Sbjct: 194 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 253
Query: 378 PTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRL 411
P Y +L+ CW+ + RP F + +RL
Sbjct: 254 PREMY-----DLMNLCWTYDVENRPGFAAVELRL 282
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G + AVK + + + ++ + E+ LL+++ HPN+++ +V E
Sbjct: 74 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 133
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL---RDDSGH 288
G+L + + A + + G+ Y+H+N+ I+HRDL+P N+L + +
Sbjct: 134 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDAN 190
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEM 348
+++ DFGLS + + +K D+ T Y APEV YD K DV+S +IL +
Sbjct: 191 IRIIDFGLSTHFEASKKMK-DKIGTA-----YYIAPEVLHG-TYDEKCDVWSTGVILYIL 243
Query: 349 IEGCPPFPTKQE----KEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTF 404
+ GCPPF E K+V K E P ++ + ++LI + P R +
Sbjct: 244 LSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE----SAKDLIRKMLTYVPSMRISA 299
Query: 405 RQIL 408
R L
Sbjct: 300 RDAL 303
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++T+ +P G L
Sbjct: 44 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCL 100
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 101 LDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 157
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 158 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 212
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 213 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 269
Query: 411 LDDIS 415
++
Sbjct: 270 FSKMA 274
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 17/212 (8%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G + AVK + + + ++ + E+ LL+++ HPN+++ +V E
Sbjct: 75 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 134
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL---RDDSGH 288
G+L + + A + + G+ Y+H+N+ I+HRDL+P N+L + +
Sbjct: 135 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDAN 191
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEM 348
+++ DFGLS + + +K D+ T Y APEV YD K DV+S +IL +
Sbjct: 192 IRIIDFGLSTHFEASKKMK-DKIGTA-----YYIAPEVLHG-TYDEKCDVWSTGVILYIL 244
Query: 349 IEGCPPFPTKQE----KEVPKAYIANERPPFR 376
+ GCPPF E K+V K E P ++
Sbjct: 245 LSGCPPFNGANEYDILKKVEKGKYTFELPQWK 276
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 53/265 (20%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
QVAVK L E+ D + +A + EL ++ ++ H N+V LGA T S P+ ++ EY G
Sbjct: 77 QVAVKMLKEK--ADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYG 134
Query: 233 DLRAYLKQK-----------------------GALKPTLAVKFALDIARGMNYLHENRPE 269
DL YL+ K L + FA +A+GM +L +
Sbjct: 135 DLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FK 191
Query: 270 AIIHRDLEPSNILRDDSGHLKVADFGLSK-LLKFANTVKEDR---PVTCEETSWRYAAPE 325
+ +HRDL N+L +K+ DFGL++ ++ +N V PV ++ APE
Sbjct: 192 SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPV-------KWMAPE 244
Query: 326 VYKNEEYDTKVDVFSFALILQEMIE-GCPPFP-----TKQEKEVPKAYIANERPPFRAPT 379
Y K DV+S+ ++L E+ G P+P K + + ++ PF A
Sbjct: 245 SLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQ--PFYATE 302
Query: 380 THYAYGLRELIEDCWSEEPFRRPTF 404
Y +++ CW+ + +RP+F
Sbjct: 303 EIYI-----IMQSCWAFDSRKRPSF 322
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 11/186 (5%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM----MIVTEYLP 230
VAVK L ++ D F E + HP +V TP IV EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 231 KGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
LR + +G + P A++ D + +N+ H+N IIHRD++P+NI+ + +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVK 156
Query: 291 VADFGLSKLLK-FANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMI 349
V DFG+++ + N+V + V + +Y +PE + + D + DV+S +L E++
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIG---TAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213
Query: 350 EGCPPF 355
G PPF
Sbjct: 214 TGEPPF 219
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 122/258 (47%), Gaps = 34/258 (13%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVKT+ E E F++E ++++ +VV+ LG V++ P ++V E + G
Sbjct: 49 TRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 106
Query: 233 DLRAYLK--------QKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
DL++YL+ G PTL ++ A +IA GM YL+ + +HR+L N +
Sbjct: 107 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCM 163
Query: 283 RDDSGHLKVADFGLSKLL----KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDV 338
+K+ DFG+++ + + K PV R+ APE K+ + T D+
Sbjct: 164 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-------RWMAPESLKDGVFTTSSDM 216
Query: 339 FSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWS 395
+SF ++L E+ P+ ++V K + P P + +L+ CW
Sbjct: 217 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER-----VTDLMRMCWQ 271
Query: 396 EEPFRRPTFRQILMRLDD 413
P RPTF +I+ L D
Sbjct: 272 FNPNMRPTFLEIVNLLKD 289
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 114/236 (48%), Gaps = 14/236 (5%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + P V + LG ST + +VT+ +P G L
Sbjct: 49 VAIKVLREN--TSPKANKEILDEAYVMAGVGSPYVSRLLGICLTST-VQLVTQLMPYGCL 105
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
++++ +G L + + + IA+GM+YL + R ++HRDL N+L H+K+ D
Sbjct: 106 LDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVR---LVHRDLAARNVLVKSPNHVKITD 162
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GC 352
FGL++LL T + + ++ A E + + DV+S+ + + E++ G
Sbjct: 163 FGLARLLDIDET---EYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGA 219
Query: 353 PPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P+ +E+P ER P T Y ++ CW + RP FR+++
Sbjct: 220 KPYDGIPAREIPDLLEKGERLPQPPICTIDVY---MIMVKCWMIDSECRPRFRELV 272
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G + AVK + + + ++ + E+ LL+++ HPN+++ +V E
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL---RDDSGH 288
G+L + + A + + G+ Y+H+N+ I+HRDL+P N+L + +
Sbjct: 111 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDAN 167
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEM 348
+++ DFGLS + + +K D+ T Y APEV YD K DV+S +IL +
Sbjct: 168 IRIIDFGLSTHFEASKKMK-DKIGTA-----YYIAPEVLHG-TYDEKCDVWSTGVILYIL 220
Query: 349 IEGCPPFPTKQE----KEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTF 404
+ GCPPF E K+V K E P ++ + ++LI + P R +
Sbjct: 221 LSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE----SAKDLIRKMLTYVPSMRISA 276
Query: 405 RQIL 408
R L
Sbjct: 277 RDAL 280
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF + ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADEPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 147/346 (42%), Gaps = 47/346 (13%)
Query: 38 RVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTA----LHVAACQ--------GRTDV 85
R R + N+G G KE +D+D+R A VA CQ T +
Sbjct: 23 RPRYFLLKNDGTFIGYKE--------RPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFI 74
Query: 86 VRLL-----LSRGADVD-PEDR--WGSTPLADAVYYKHHDVIKLLEEHGA---KPSTAPM 134
+R L + R V+ PE+R W + A K ++ G+ M
Sbjct: 75 IRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEM 134
Query: 135 HVQNAREVPEYEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDED 189
V A+ P++ + E ++ + KGTF G A+K L +EV +D
Sbjct: 135 EVSLAK--PKHRVTMNEFEYLKL--LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKD 190
Query: 190 KVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLA 249
+V + E +LQ RHP + + + V EY G+L +L ++ A
Sbjct: 191 EVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA 250
Query: 250 VKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKED 309
+ +I ++YLH + +++RDL+ N++ D GH+K+ DFGL K +K+
Sbjct: 251 RFYGAEIVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCK-----EGIKDG 303
Query: 310 RPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF 355
+ + Y APEV ++ +Y VD + +++ EM+ G PF
Sbjct: 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 11/186 (5%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM----MIVTEYLP 230
VAVK L ++ D F E + HP +V TP IV EY+
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 116
Query: 231 KGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
LR + +G + P A++ D + +N+ H+N IIHRD++P+NI+ + +K
Sbjct: 117 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVK 173
Query: 291 VADFGLSKLLK-FANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMI 349
V DFG+++ + N+V + V + +Y +PE + + D + DV+S +L E++
Sbjct: 174 VMDFGIARAIADSGNSVTQTAAVI---GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 230
Query: 350 EGCPPF 355
G PPF
Sbjct: 231 TGEPPF 236
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 122/258 (47%), Gaps = 34/258 (13%)
Query: 173 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
T+VAVKT+ E E F++E ++++ +VV+ LG V++ P ++V E + G
Sbjct: 48 TRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 233 DLRAYLK--------QKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
DL++YL+ G PTL ++ A +IA GM YL+ + +HR+L N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCM 162
Query: 283 RDDSGHLKVADFGLSKLL----KFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDV 338
+K+ DFG+++ + + K PV R+ APE K+ + T D+
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-------RWMAPESLKDGVFTTSSDM 215
Query: 339 FSFALILQEMIEGC-PPFPTKQEKEVPKAYIANER--PPFRAPTTHYAYGLRELIEDCWS 395
+SF ++L E+ P+ ++V K + P P + +L+ CW
Sbjct: 216 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER-----VTDLMRMCWQ 270
Query: 396 EEPFRRPTFRQILMRLDD 413
P RPTF +I+ L D
Sbjct: 271 FNPNMRPTFLEIVNLLKD 288
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 16/229 (6%)
Query: 188 EDKVKAFIDELALLQKIRHPNVVQFLGAVTQ--STPMMIVTEYLPKGDLRAYL----KQK 241
E + + + E+ LL++++HPN+V++ + +T + IV EY GDL + + K++
Sbjct: 46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 242 GALKPTLAVKFALDIARGMNYLH--ENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKL 299
L ++ + + H + ++HRDL+P+N+ D ++K+ DFGL+++
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
Query: 300 LKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQ 359
L + + T T + Y +PE Y+ K D++S +L E+ PPF
Sbjct: 166 LNHDTSFAK----TFVGTPY-YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
Query: 360 EKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+KE+ FR Y+ L E+I + + + RP+ +IL
Sbjct: 221 QKELAGKI---REGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 24/272 (8%)
Query: 147 IDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELA----LLQ 202
++ KEL N + KG +++ VKT+ ++ +E A DEL ++Q
Sbjct: 30 LEDKELGSGNFGTVKKGYYQMKK------VVKTVAVKILKNEANDPALKDELLAEANVMQ 83
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNY 262
++ +P +V+ +G + ++ M+V E G L YL+Q +K ++ ++ GM Y
Sbjct: 84 QLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 142
Query: 263 LHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW--R 320
L E+ +HRDL N+L + K++DFGLSK L+ E+ W +
Sbjct: 143 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALR----ADENYYKAQTHGKWPVK 195
Query: 321 YAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPT 379
+ APE ++ +K DV+SF +++ E G P+ + EV ER A
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 255
Query: 380 THYAYGLRELIEDCWSEEPFRRPTFRQILMRL 411
Y L L CW+ + RP F + +RL
Sbjct: 256 PREMYDLMNL---CWTYDVENRPGFAAVELRL 284
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 24/272 (8%)
Query: 147 IDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELA----LLQ 202
++ KEL N + KG +++ VKT+ ++ +E A DEL ++Q
Sbjct: 30 LEDKELGSGNFGTVKKGYYQMKK------VVKTVAVKILKNEANDPALKDELLAEANVMQ 83
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNY 262
++ +P +V+ +G + ++ M+V E G L YL+Q +K ++ ++ GM Y
Sbjct: 84 QLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 142
Query: 263 LHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW--R 320
L E+ +HRDL N+L + K++DFGLSK L+ E+ W +
Sbjct: 143 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALR----ADENYYKAQTHGKWPVK 195
Query: 321 YAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIANERPPFRAPT 379
+ APE ++ +K DV+SF +++ E G P+ + EV ER A
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 255
Query: 380 THYAYGLRELIEDCWSEEPFRRPTFRQILMRL 411
Y L L CW+ + RP F + +RL
Sbjct: 256 PREMYDLMNL---CWTYDVENRPGFAAVELRL 284
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 13/206 (6%)
Query: 176 AVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLR 235
A+K L + D+V+ + E +L ++ HP +V+ A + ++ ++L GDL
Sbjct: 57 AMKVLKKATLKVRDRVRTKM-ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 115
Query: 236 AYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADF 294
L K + VKF L ++A +++LH II+RDL+P NIL D+ GH+K+ DF
Sbjct: 116 TRL-SKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDF 171
Query: 295 GLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPP 354
GLSK ++ ++ + Y APEV + D +SF +++ EM+ G P
Sbjct: 172 GLSK-----ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
Query: 355 FPTKQEKEVPKAYIANE--RPPFRAP 378
F K KE + + P F +P
Sbjct: 227 FQGKDRKETMTMILKAKLGMPQFLSP 252
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 13/206 (6%)
Query: 176 AVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLR 235
A+K L + D+V+ + E +L ++ HP +V+ A + ++ ++L GDL
Sbjct: 56 AMKVLKKATLKVRDRVRTKM-ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 114
Query: 236 AYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADF 294
L K + VKF L ++A +++LH II+RDL+P NIL D+ GH+K+ DF
Sbjct: 115 TRL-SKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDF 170
Query: 295 GLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPP 354
GLSK ++ ++ + Y APEV + D +SF +++ EM+ G P
Sbjct: 171 GLSK-----ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
Query: 355 FPTKQEKEVPKAYIANE--RPPFRAP 378
F K KE + + P F +P
Sbjct: 226 FQGKDRKETMTMILKAKLGMPQFLSP 251
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 113/251 (45%), Gaps = 22/251 (8%)
Query: 174 QVAVKTLG-EEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
+VA+K + E+ T D++ + E+ + + HPN+V + + + +V + L G
Sbjct: 37 KVAIKRINLEKCQTSMDEL---LKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 93
Query: 233 DLRAYLK--------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRD 284
+ +K + G L + ++ G+ YLH+N IHRD++ NIL
Sbjct: 94 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLG 150
Query: 285 DSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFAL 343
+ G +++ADFG+S L + ++ + + APEV + YD K D++SF +
Sbjct: 151 EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGI 210
Query: 344 ILQEMIEGCPPFPTKQEKEVPKAYIANERPPFRAPTT------HYAYGLRELIEDCWSEE 397
E+ G P+ +V + N+ P Y R++I C ++
Sbjct: 211 TAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKD 270
Query: 398 PFRRPTFRQIL 408
P +RPT ++L
Sbjct: 271 PEKRPTAAELL 281
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 17/212 (8%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G + AVK + + + ++ + E+ LL+++ HPN+++ +V E
Sbjct: 57 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 116
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL---RDDSGH 288
G+L + + A + + G+ Y+H+N+ I+HRDL+P N+L + +
Sbjct: 117 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDAN 173
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEM 348
+++ DFGLS + + +K D+ T Y APEV YD K DV+S +IL +
Sbjct: 174 IRIIDFGLSTHFEASKKMK-DKIGTA-----YYIAPEVLHG-TYDEKCDVWSTGVILYIL 226
Query: 349 IEGCPPFPTKQE----KEVPKAYIANERPPFR 376
+ GCPPF E K+V K E P ++
Sbjct: 227 LSGCPPFNGANEYDILKKVEKGKYTFELPQWK 258
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 23/293 (7%)
Query: 127 AKPSTAP-MHVQNA----REVPEYEIDPKELD-FSNSVEITKGTF----RIASWRGTQV- 175
AKPS P HV +E+P+ +DP+ + + + KG F I +V
Sbjct: 11 AKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVF 70
Query: 176 AVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLR 235
A K + + + + + E+A+ + + +P+VV F G + +V E + L
Sbjct: 71 AGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL 130
Query: 236 AYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFG 295
K++ A+ A F +G+ YLH NR +IHRDL+ N+ +D +K+ DFG
Sbjct: 131 ELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFG 187
Query: 296 LSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF 355
L+ ++F E + C + Y APEV + + +VD++S IL ++ G PPF
Sbjct: 188 LATKIEFDG---ERKKTLC--GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Query: 356 PTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
T KE YI ++ + P H LI +P RP+ ++L
Sbjct: 243 ETSCLKE---TYIRIKKNEYSVP-RHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 113/251 (45%), Gaps = 22/251 (8%)
Query: 174 QVAVKTLG-EEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
+VA+K + E+ T D++ + E+ + + HPN+V + + + +V + L G
Sbjct: 42 KVAIKRINLEKCQTSMDEL---LKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 98
Query: 233 DLRAYLK--------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRD 284
+ +K + G L + ++ G+ YLH+N IHRD++ NIL
Sbjct: 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLG 155
Query: 285 DSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFAL 343
+ G +++ADFG+S L + ++ + + APEV + YD K D++SF +
Sbjct: 156 EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGI 215
Query: 344 ILQEMIEGCPPFPTKQEKEVPKAYIANERPPFRAPTT------HYAYGLRELIEDCWSEE 397
E+ G P+ +V + N+ P Y R++I C ++
Sbjct: 216 TAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKD 275
Query: 398 PFRRPTFRQIL 408
P +RPT ++L
Sbjct: 276 PEKRPTAAELL 286
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++ + +P G L
Sbjct: 48 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGXL 104
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 105 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 161
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 162 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 216
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 217 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 273
Query: 411 LDDIS 415
++
Sbjct: 274 FSKMA 278
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 23/293 (7%)
Query: 127 AKPSTAP-MHVQNA----REVPEYEIDPKELD-FSNSVEITKGTF----RIASWRGTQV- 175
AKPS P HV +E+P+ +DP+ + + + KG F I +V
Sbjct: 11 AKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVF 70
Query: 176 AVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLR 235
A K + + + + + E+A+ + + +P+VV F G + +V E + L
Sbjct: 71 AGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL 130
Query: 236 AYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFG 295
K++ A+ A F +G+ YLH NR +IHRDL+ N+ +D +K+ DFG
Sbjct: 131 ELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFG 187
Query: 296 LSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF 355
L+ ++F E + C + Y APEV + + +VD++S IL ++ G PPF
Sbjct: 188 LATKIEFDG---ERKKXLC--GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Query: 356 PTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
T KE YI ++ + P H LI +P RP+ ++L
Sbjct: 243 ETSCLKE---TYIRIKKNEYSVP-RHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C Y AP + ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--YLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 128/296 (43%), Gaps = 47/296 (15%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI--RHPNVVQFLGAVTQST 220
G + WRG +VAVK FT E+ ++ E + Q + RH N++ F+ A + T
Sbjct: 51 GEVWMGKWRGEKVAVKVF----FTTEEA--SWFRETEIYQTVLMRHENILGFIAADIKGT 104
Query: 221 ----PMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLH------ENRPEA 270
+ ++T+Y G L YLK L +K A G+ +LH + +P A
Sbjct: 105 GSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKP-A 162
Query: 271 IIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKE-DRPVTCEETSWRYAAPEV--- 326
I HRDL+ NIL +G +AD GL+ +KF + E D P + RY PEV
Sbjct: 163 IAHRDLKSKNILVKKNGTCCIADLGLA--VKFISDTNEVDIPPNTRVGTKRYMPPEVLDE 220
Query: 327 -YKNEEYDTKV--DVFSFALILQEMIEGCPPFPTKQEKEVPK----------------AY 367
+ + + D++SF LIL E+ C +E ++P
Sbjct: 221 SLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVC 280
Query: 368 IANERPPF--RAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLSIK 421
I RP F R + + +L+ +CW+ P R T ++ L +S+ IK
Sbjct: 281 IKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDIK 336
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 17/230 (7%)
Query: 153 DFSNSVEITKGTF-RIASWRGTQ----VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
DF + KG F + R Q +A+K L + E E+ + +RHP
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENR 267
N+++ + ++ E+ P+G+L L++ G + F ++A ++Y HE +
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 268 PEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVY 327
+IHRD++P N+L G LK+ADFG S + R C + Y PE+
Sbjct: 135 ---VIHRDIKPENLLMGYKGELKIADFGWS-----VHAPSLRRRXMC--GTLDYLPPEMI 184
Query: 328 KNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQEKEVPKAYIANERPPF 375
+ + +D KVD++ ++ E + G PPF P+ E + + PPF
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF 234
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++ + +P G L
Sbjct: 54 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCL 110
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 111 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 167
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 168 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 223 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 279
Query: 411 LDDIS 415
++
Sbjct: 280 FSKMA 284
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 16/229 (6%)
Query: 188 EDKVKAFIDELALLQKIRHPNVVQFLGAVTQ--STPMMIVTEYLPKGDLRAYL----KQK 241
E + + + E+ LL++++HPN+V++ + +T + IV EY GDL + + K++
Sbjct: 46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 242 GALKPTLAVKFALDIARGMNYLH--ENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKL 299
L ++ + + H + ++HRDL+P+N+ D ++K+ DFGL+++
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
Query: 300 LKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQ 359
L ED T + Y +PE Y+ K D++S +L E+ PPF
Sbjct: 166 LNH----DEDFAKEFVGTPY-YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
Query: 360 EKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+KE+ FR Y+ L E+I + + + RP+ +IL
Sbjct: 221 QKELAGKI---REGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++T+ +P G L
Sbjct: 49 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCL 105
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 106 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 162
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FG +KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 163 FGRAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 218 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMRKCWMIDADSRPKFRELIIE 274
Query: 411 LDDIS 415
++
Sbjct: 275 FSKMA 279
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++ + +P G L
Sbjct: 51 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCL 107
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 108 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 164
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 165 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 219
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 220 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 276
Query: 411 LDDIS 415
++
Sbjct: 277 FSKMA 281
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++ + +P G L
Sbjct: 49 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCL 105
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 106 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 162
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 163 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 218 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 274
Query: 411 LDDIS 415
++
Sbjct: 275 FSKMA 279
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 17/230 (7%)
Query: 153 DFSNSVEITKGTF-RIASWRGTQ----VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
DF + KG F + R Q +A+K L + E E+ + +RHP
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENR 267
N+++ + ++ E+ P+G+L L++ G + F ++A ++Y HE +
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 135
Query: 268 PEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVY 327
+IHRD++P N+L G LK+ADFG S + R C + Y PE+
Sbjct: 136 ---VIHRDIKPENLLMGYKGELKIADFGWS-----VHAPSLRRRXMC--GTLDYLPPEMI 185
Query: 328 KNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQEKEVPKAYIANERPPF 375
+ + +D KVD++ ++ E + G PPF P+ E + + PPF
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF 235
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++ + +P G L
Sbjct: 50 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCL 106
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 107 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 163
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 164 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 219 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 275
Query: 411 LDDIS 415
++
Sbjct: 276 FSKMA 280
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++ + +P G L
Sbjct: 48 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCL 104
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 105 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 161
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 162 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 216
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 217 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 273
Query: 411 LDDIS 415
++
Sbjct: 274 FSKMA 278
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 13/206 (6%)
Query: 176 AVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLR 235
A+K L + D+V+ + E +L ++ HP +V+ A + ++ ++L GDL
Sbjct: 56 AMKVLKKATLKVRDRVRTKM-ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 114
Query: 236 AYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADF 294
L K + VKF L ++A +++LH II+RDL+P NIL D+ GH+K+ DF
Sbjct: 115 TRL-SKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDF 170
Query: 295 GLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPP 354
GLSK ++ ++ + Y APEV + D +SF +++ EM+ G P
Sbjct: 171 GLSK-----ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
Query: 355 FPTKQEKEVPKAYIANE--RPPFRAP 378
F K KE + + P F +P
Sbjct: 226 FQGKDRKETMTMILKAKLGMPQFLSP 251
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 114/241 (47%), Gaps = 15/241 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G + A+K + + T A +DE+A+L+++ HPN+++ +V E
Sbjct: 29 GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRG 88
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH--- 288
G+L + + A + G YLH++ I+HRDL+P N+L +
Sbjct: 89 GELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDAL 145
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEM 348
+K+ DFGLS + +KE Y APEV + ++YD K DV+S +IL +
Sbjct: 146 IKIVDFGLSAHFEVGGKMKERLGTA------YYIAPEVLR-KKYDEKCDVWSCGVILYIL 198
Query: 349 IEGCPPFPTKQEKEVPKAYIANERPPFRAPT-THYAYGLRELIEDCWSEEPFRRPTFRQI 407
+ G PPF + ++E+ K + + F P T + ++L++ + EP +R + +
Sbjct: 199 LCGYPPFGGQTDQEILKR-VEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEA 257
Query: 408 L 408
L
Sbjct: 258 L 258
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++ + +P G L
Sbjct: 47 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCL 103
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 104 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 160
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FGL+KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 161 FGLAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 216 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 272
Query: 411 LDDIS 415
++
Sbjct: 273 FSKMA 277
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
+A+K L + E E+ + +RHPN+++ + ++ E+ P+G+L
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 235 RAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADF 294
L++ G + F ++A ++Y HE + +IHRD++P N+L G LK+ADF
Sbjct: 102 YKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADF 158
Query: 295 GLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPP 354
G S + R C + Y PE+ + + +D KVD++ ++ E + G PP
Sbjct: 159 GWS-----VHAPSLRRRXMC--GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
Query: 355 F--PTKQEKEVPKAYIANERPPF 375
F P+ E + + PPF
Sbjct: 212 FDSPSHTETHRRIVNVDLKFPPF 234
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 112/228 (49%), Gaps = 16/228 (7%)
Query: 192 KAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ-KGALKPTLAV 250
K +DE ++ + +P+V + LG ST + ++T+ +P G L Y+++ K + +
Sbjct: 96 KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLL 154
Query: 251 KFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDR 310
+ + IA+GMNYL + R ++HRDL N+L H+K+ DFGL+KLL E++
Sbjct: 155 NWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG-----AEEK 206
Query: 311 PVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAY 367
E + ++ A E + Y + DV+S+ + + E++ G P+ E+
Sbjct: 207 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 266
Query: 368 IANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDIS 415
ER P T Y ++ CW + RP FR++++ ++
Sbjct: 267 EKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIEFSKMA 311
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 114/241 (47%), Gaps = 15/241 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G + A+K + + T A +DE+A+L+++ HPN+++ +V E
Sbjct: 46 GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRG 105
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH--- 288
G+L + + A + G YLH++ I+HRDL+P N+L +
Sbjct: 106 GELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDAL 162
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEM 348
+K+ DFGLS + +KE Y APEV + ++YD K DV+S +IL +
Sbjct: 163 IKIVDFGLSAHFEVGGKMKERLGTA------YYIAPEVLR-KKYDEKCDVWSCGVILYIL 215
Query: 349 IEGCPPFPTKQEKEVPKAYIANERPPFRAPT-THYAYGLRELIEDCWSEEPFRRPTFRQI 407
+ G PPF + ++E+ K + + F P T + ++L++ + EP +R + +
Sbjct: 216 LCGYPPFGGQTDQEILKR-VEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEA 274
Query: 408 L 408
L
Sbjct: 275 L 275
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++T+ +P G L
Sbjct: 54 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCL 110
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 111 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 167
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FG +KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 168 FGRAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 223 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 279
Query: 411 LDDIS 415
++
Sbjct: 280 FSKMA 284
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 108/229 (47%), Gaps = 16/229 (6%)
Query: 188 EDKVKAFIDELALLQKIRHPNVVQFLGAVTQ--STPMMIVTEYLPKGDLRAYL----KQK 241
E + + + E+ LL++++HPN+V++ + +T + IV EY GDL + + K++
Sbjct: 46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 242 GALKPTLAVKFALDIARGMNYLH--ENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKL 299
L ++ + + H + ++HRDL+P+N+ D ++K+ DFGL+++
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
Query: 300 LKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQ 359
L + + T Y +PE Y+ K D++S +L E+ PPF
Sbjct: 166 LNHDTSFAKAFVGTP-----YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
Query: 360 EKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+KE+ FR Y+ L E+I + + + RP+ +IL
Sbjct: 221 QKELAGKI---REGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++T+ +P G L
Sbjct: 47 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCL 103
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 104 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 160
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FG +KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 161 FGRAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 216 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 272
Query: 411 LDDIS 415
++
Sbjct: 273 FSKMA 277
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 62
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+++ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R T E + Y APE
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYTHEVVTLWYRAPE 173
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 17/228 (7%)
Query: 188 EDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ--KGALK 245
E++++ +I E+ +L HP +V+ LGA + I+ E+ P G + A + + +G +
Sbjct: 49 EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE 108
Query: 246 PTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANT 305
P + V + +N+LH R IIHRDL+ N+L G +++ADFG+S A
Sbjct: 109 PQIQV-VCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVS-----AKN 159
Query: 306 VKEDRPVTCEETSWRYAAPEV-----YKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+K + + + APEV K+ YD K D++S + L EM + PP
Sbjct: 160 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP 219
Query: 361 KEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
V IA PP + ++ R+ ++ + P RP+ Q+L
Sbjct: 220 MRV-LLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLL 266
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 133/283 (46%), Gaps = 30/283 (10%)
Query: 147 IDPKELDFSNSV-EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIR 205
ID K+L+F + E G W+G + VK L ++ K + F +E L+
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTR-KSRDFNEECPRLRIFS 65
Query: 206 HPNVVQFLGAVTQSTPM---MIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGM 260
HPNV+ LGA QS P ++T ++P G L L + + + AVKFALD+ARGM
Sbjct: 66 HPNVLPVLGA-CQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGM 124
Query: 261 NYLHENRPEAIIHRDLEPSNILRDD--SGHLKVADFGLSKLLKFANTVKEDRPVTCEETS 318
+LH P I L +++ D+ + + +AD S F + + P
Sbjct: 125 AFLHTLEP-LIPRHALNSRSVMIDEDMTARISMADVKFS----FQSPGRMYAPA------ 173
Query: 319 WRYAAPEVYKNEEYDTK---VDVFSFALILQEMIEGCPPFPTKQEKEVP-KAYIANERPP 374
+ APE + + DT D++SFA++L E++ PF E+ K + RP
Sbjct: 174 --WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPT 231
Query: 375 FRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQ 417
+ + + +L++ C +E+P +RP F I+ L+ + D+
Sbjct: 232 IPPGISPH---VSKLMKICMNEDPAKRPKFDMIVPILEKMQDK 271
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 17/228 (7%)
Query: 188 EDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ--KGALK 245
E++++ +I E+ +L HP +V+ LGA + I+ E+ P G + A + + +G +
Sbjct: 57 EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE 116
Query: 246 PTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANT 305
P + V + +N+LH R IIHRDL+ N+L G +++ADFG+S A
Sbjct: 117 PQIQV-VCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVS-----AKN 167
Query: 306 VKEDRPVTCEETSWRYAAPEV-----YKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+K + + + APEV K+ YD K D++S + L EM + PP
Sbjct: 168 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP 227
Query: 361 KEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
V IA PP + ++ R+ ++ + P RP+ Q+L
Sbjct: 228 MRV-LLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLL 274
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 89/171 (52%), Gaps = 20/171 (11%)
Query: 195 IDELALLQKIR---HPNVVQFLGAVTQS-----TPMMIVTEYLPKGDLRAYL-KQKGALK 245
I E+A+L+ + HPNVV+ T S T + +V E++ + DL YL K
Sbjct: 59 IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGV 117
Query: 246 PTLAVK-FALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFAN 304
PT +K + RG+++LH +R ++HRDL+P NIL SG +K+ADFGL+++ F
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM 174
Query: 305 TVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF 355
+ + T W Y APEV Y T VD++S I EM P F
Sbjct: 175 AL-----TSVVVTLW-YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 9/201 (4%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIR-HPNVVQFLGAVTQSTPMMIVTEYLP 230
G AVK L ++V +D V+ + E +L R HP + Q + V E++
Sbjct: 48 GDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107
Query: 231 KGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
GDL ++++ A +A +I + +LH+ + II+RDL+ N+L D GH K
Sbjct: 108 GGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCK 164
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE 350
+ADFG+ K N V C Y APE+ + Y VD ++ ++L EM+
Sbjct: 165 LADFGMCK-EGICNGVT--TATFCGTPD--YIAPEILQEMLYGPAVDWWAMGVLLYEMLC 219
Query: 351 GCPPFPTKQEKEVPKAYIANE 371
G PF + E ++ +A + +E
Sbjct: 220 GHAPFEAENEDDLFEAILNDE 240
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 15/222 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L ++ +++ ++E +LQ + P +V+ + ++ + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G++ ++L++ G A +A I YLH +I+RDL+P N+L D G+++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG FA VK C APE+ ++ Y+ VD ++ +++ EM G
Sbjct: 183 TDFG------FAKRVKGRTWXLCGTPE--ALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDC 393
PPF Q ++ + ++ + R P +H++ L++L+ +
Sbjct: 235 YPPFFADQPIQIYEKIVSGK---VRFP-SHFSSDLKDLLRNL 272
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 89/171 (52%), Gaps = 20/171 (11%)
Query: 195 IDELALLQKIR---HPNVVQFLGAVTQS-----TPMMIVTEYLPKGDLRAYL-KQKGALK 245
I E+A+L+ + HPNVV+ T S T + +V E++ + DL YL K
Sbjct: 59 IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGV 117
Query: 246 PTLAVK-FALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFAN 304
PT +K + RG+++LH +R ++HRDL+P NIL SG +K+ADFGL+++ F
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM 174
Query: 305 TVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF 355
+ + T W Y APEV Y T VD++S I EM P F
Sbjct: 175 AL-----TSVVVTLW-YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 114/237 (48%), Gaps = 13/237 (5%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VA++ + + K + I+E+ ++++ ++PN+V +L + + +V EYL
Sbjct: 45 GQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G L + + + +A + + + +LH N+ +IHRD++ NIL G +K+
Sbjct: 102 GSLTDVVTETCMDEGQIAA-VCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKL 157
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG + T ++ + T T + + APEV + Y KVD++S ++ EMIEG
Sbjct: 158 TDFGFCAQI----TPEQSKRSTMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
PP+ + N P + P A R+ + C + +R + +++L
Sbjct: 213 EPPYLNENPLRALYLIATNGTPELQNPEKLSAI-FRDFLNRCLDMDVEKRGSAKELL 268
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 160 ITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS 219
I K F + ++ EE++ +E++LL+ + HPN+++
Sbjct: 69 IKKSQFDKGRYSDDNKNIEKFHEEIY----------NEISLLKSLDHPNIIKLFDVFEDK 118
Query: 220 TPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPS 279
+VTE+ G+L + + A I G+ YLH++ I+HRD++P
Sbjct: 119 KYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPE 175
Query: 280 NILRDDSGHL---KVADFGLSKLLKFANTVK-EDRPVTCEETSWRYAAPEVYKNEEYDTK 335
NIL ++ L K+ DFGLS F+ K DR T Y APEV K ++Y+ K
Sbjct: 176 NILLENKNSLLNIKIVDFGLSSF--FSKDYKLRDRLGTA-----YYIAPEVLK-KKYNEK 227
Query: 336 VDVFSFALILQEMIEGCPPFPTKQEKEVPK 365
DV+S +I+ ++ G PPF + ++++ K
Sbjct: 228 CDVWSCGVIMYILLCGYPPFGGQNDQDIIK 257
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 22/252 (8%)
Query: 163 GTFRIASWR-GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTP 221
G +R S G +VA+K + ++ V+ +E+ + +++HP++++ S
Sbjct: 26 GVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNY 85
Query: 222 MMIVTEYLPKGDLRAYLKQKGALKP---TLAVKFALDIARGMNYLHENRPEAIIHRDLEP 278
+ +V E G++ YLK + +KP A F I GM YLH + I+HRDL
Sbjct: 86 VYLVLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTL 140
Query: 279 SNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDV 338
SN+L + ++K+ADFGL+ LK + E C + Y +PE+ + + DV
Sbjct: 141 SNLLLTRNMNIKIADFGLATQLKMPH---EKHYTLC--GTPNYISPEIATRSAHGLESDV 195
Query: 339 FSFALILQEMIEGCPPFPTKQEKE-VPKAYIAN-ERPPFRAPTTHYAYGLRELIEDCWSE 396
+S + ++ G PPF T K + K +A+ E P F + ++LI
Sbjct: 196 WSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEA------KDLIHQLLRR 249
Query: 397 EPFRRPTFRQIL 408
P R + +L
Sbjct: 250 NPADRLSLSSVL 261
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 89/171 (52%), Gaps = 20/171 (11%)
Query: 195 IDELALLQKIR---HPNVVQFLGAVTQS-----TPMMIVTEYLPKGDLRAYL-KQKGALK 245
I E+A+L+ + HPNVV+ T S T + +V E++ + DL YL K
Sbjct: 59 IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGV 117
Query: 246 PTLAVK-FALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFAN 304
PT +K + RG+++LH +R ++HRDL+P NIL SG +K+ADFGL+++ F
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM 174
Query: 305 TVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF 355
+ + T W Y APEV Y T VD++S I EM P F
Sbjct: 175 AL-----TSVVVTLW-YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 69
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R T E + Y APE
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYTHEVVTLWYRAPE 180
Query: 326 VYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 181 ILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 216
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFA 253
I EL +L + P +V F GA + I E++ G L LK+ + + K +
Sbjct: 61 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVS 120
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL--KFANTVKEDRP 311
+ + RG+ YL E I+HRD++PSNIL + G +K+ DFG+S L AN+ R
Sbjct: 121 IAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR- 177
Query: 312 VTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAY 367
Y APE + Y + D++S L L E+ G P P KE+ +
Sbjct: 178 --------SYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIF 225
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 10/209 (4%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L +EV +D+V + E +LQ RHP + + + V EY
Sbjct: 33 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 92
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G+L +L ++ A + +I ++YLH + +++RDL+ N++ D GH+K+
Sbjct: 93 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKI 150
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFGL K +K+ + + Y APEV ++ +Y VD + +++ EM+ G
Sbjct: 151 TDFGLCK-----EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 205
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTT 380
PF + +++ + + E R P T
Sbjct: 206 RLPFYNQDHEKLFELILMEE---IRFPRT 231
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 62
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R T E + Y APE
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYTHEVVTLWYRAPE 173
Query: 326 VYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 174 ILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 10/209 (4%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L +EV +D+V + E +LQ RHP + + + V EY
Sbjct: 34 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 93
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G+L +L ++ A + +I ++YLH + +++RDL+ N++ D GH+K+
Sbjct: 94 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKI 151
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFGL K +K+ + + Y APEV ++ +Y VD + +++ EM+ G
Sbjct: 152 TDFGLCK-----EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTT 380
PF + +++ + + E R P T
Sbjct: 207 RLPFYNQDHEKLFELILMEE---IRFPRT 232
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 10/209 (4%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A+K L +EV +D+V + E +LQ RHP + + + V EY
Sbjct: 35 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 94
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G+L +L ++ A + +I ++YLH + +++RDL+ N++ D GH+K+
Sbjct: 95 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKI 152
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFGL K +K+ + + Y APEV ++ +Y VD + +++ EM+ G
Sbjct: 153 TDFGLCK-----EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 207
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTT 380
PF + +++ + + E R P T
Sbjct: 208 RLPFYNQDHEKLFELILMEE---IRFPRT 233
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 98/186 (52%), Gaps = 13/186 (6%)
Query: 175 VAVKT--LGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKG 232
VA+K LG + + + E+ LLQ++ HPN++ L A + + +V +++ +
Sbjct: 38 VAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ET 96
Query: 233 DLRAYLKQKG-ALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
DL +K L P+ + L +G+ YLH++ I+HRDL+P+N+L D++G LK+
Sbjct: 97 DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKL 153
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIE 350
ADFGL+K N + V T W Y APE ++ Y VD+++ IL E++
Sbjct: 154 ADFGLAKSFGSPNRAYXHQVV----TRW-YRAPELLFGARMYGVGVDMWAVGCILAELLL 208
Query: 351 GCPPFP 356
P P
Sbjct: 209 RVPFLP 214
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 63
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R T E + Y APE
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYTHEVVTLWYRAPE 174
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 69
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R T E + Y APE
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYTHEVVTLWYRAPE 180
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 181 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 216
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 62
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R T E + Y APE
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYTHEVVTLWYRAPE 173
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 66
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R T E + Y APE
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYTHEVVTLWYRAPE 177
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 213
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 21/267 (7%)
Query: 148 DPKELDFSNSVEITKGTFRIASW-----RGTQVAVKTLGEEVFTDEDKVKAFIDELALLQ 202
DP+E +N ++I +G+ I G QVAVK + + + + +E+ +++
Sbjct: 42 DPREY-LANFIKIGEGSTGIVCIATEKHTGKQVAVKKMD---LRKQQRRELLFNEVVIMR 97
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNY 262
H NVV + + +V E+L G L + + +A L + R ++Y
Sbjct: 98 DYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT-VCLSVLRALSY 156
Query: 263 LHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRY- 321
LH + +IHRD++ +IL G +K++DFG F V ++ P Y
Sbjct: 157 LHN---QGVIHRDIKSDSILLTSDGRIKLSDFG------FCAQVSKEVPKRKXLVGTPYW 207
Query: 322 AAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFRAPTTH 381
APEV Y T+VD++S +++ EMI+G PP+ + + + I + PP
Sbjct: 208 MAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR-IRDSLPPRVKDLHK 266
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ LR ++ EP +R T +++L
Sbjct: 267 VSSVLRGFLDLMLVREPSQRATAQELL 293
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 62
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R T E + Y APE
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYTHEVVTLWYRAPE 173
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 61
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R T E + Y APE
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYTHEVVTLWYRAPE 172
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 61
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R T E + Y APE
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYTHEVVTLWYRAPE 172
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 20/259 (7%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G Q AVK + EVF E EL + P +V GAV + + I E L
Sbjct: 118 GFQCAVKKVRLEVFRAE--------ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEG 169
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNI-LRDDSGHLK 290
G L +K++G L A+ + G+ YLH R I+H D++ N+ L D H
Sbjct: 170 GSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAA 226
Query: 291 VADFGLSKLLK---FANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQE 347
+ DFG + L+ ++ + ET + APEV D KVDV+S ++
Sbjct: 227 LCDFGHAVCLQPDGLGKSLLTGDYIPGTET---HMAPEVVLGRSCDAKVDVWSSCCMMLH 283
Query: 348 MIEGCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
M+ GC P+ T+ + IA+E PP R A + I++ +EP R + ++
Sbjct: 284 MLNGCHPW-TQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAEL 342
Query: 408 LMRLDDISDQL-SIKRHWK 425
+++ Q+ +K W+
Sbjct: 343 GGKVNRALQQVGGLKSPWR 361
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 114/265 (43%), Gaps = 32/265 (12%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAV--TQSTPMMIVTEYL 229
G VAVK L + + E+ +L+ + H +++++ G + + +V EY+
Sbjct: 60 GEMVAVKALKAD--AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117
Query: 230 PKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHL 289
P G LR YL + L + FA I GM YLH IHRDL N+L D+ +
Sbjct: 118 PLGSLRDYLPRHSIGLAQLLL-FAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLV 173
Query: 290 KVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMI 349
K+ DFGL+K + + R W APE K ++ DV+SF + L E++
Sbjct: 174 KIGDFGLAKAVPEGHEXYRVREDGDSPVFWY--APECLKEYKFYYASDVWSFGVTLYELL 231
Query: 350 EGC-----PPFPTKQEKEVPKAYIA----------NERPPF--RAPTTHYAYGLRELIED 392
C PP + + + + ER P + P Y L+++
Sbjct: 232 THCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVY-----HLMKN 286
Query: 393 CWSEEPFRRPTFRQILMRLDDISDQ 417
CW E RPTF ++ L + ++
Sbjct: 287 CWETEASFRPTFENLIPILKTVHEK 311
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 123/267 (46%), Gaps = 22/267 (8%)
Query: 151 ELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVV 210
EL N + +G +R+ + VA+K L + T++ + + E ++ ++ +P +V
Sbjct: 17 ELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIV 73
Query: 211 QFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPE 269
+ +G V Q+ +M+V E G L +L K P V L ++ GM YL E
Sbjct: 74 RLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN-- 130
Query: 270 AIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN 329
+HRDL N+L + + K++DFGLSK L ++ R W APE
Sbjct: 131 -FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKW--YAPECINF 187
Query: 330 EEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIAN----ERPPFRAPTTHYAY 384
++ ++ DV+S+ + + E + G P+ + EV A+I E PP P YA
Sbjct: 188 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-MAFIEQGKRMECPP-ECPPELYA- 244
Query: 385 GLRELIEDCWSEEPFRRPTFRQILMRL 411
L+ DCW + RP F + R+
Sbjct: 245 ----LMSDCWIYKWEDRPDFLTVEQRM 267
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 117/245 (47%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++ + +P G L
Sbjct: 49 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCL 105
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 106 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 162
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FG +KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 163 FGRAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 218 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMRKCWMIDADSRPKFRELIIE 274
Query: 411 LDDIS 415
++
Sbjct: 275 FSKMA 279
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 111/238 (46%), Gaps = 15/238 (6%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VA++ + + K + I+E+ ++++ ++PN+V +L + + +V EYL
Sbjct: 45 GQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G L + + + +A + + + +LH N+ +IHRD++ NIL G +K+
Sbjct: 102 GSLTDVVTETCMDEGQIAA-VCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKL 157
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRY-AAPEVYKNEEYDTKVDVFSFALILQEMIE 350
DFG F + ++ E Y APEV + Y KVD++S ++ EMIE
Sbjct: 158 TDFG------FCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 211
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
G PP+ + N P + P A R+ + C + +R + +++L
Sbjct: 212 GEPPYLNENPLRALYLIATNGTPELQNPEKLSAI-FRDFLNRCLDMDVEKRGSAKELL 268
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G + AVK + + + ++ + E+ LL+++ HPN+ + +V E
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTG 110
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL---RDDSGH 288
G+L + + A + + G+ Y H+N+ I+HRDL+P N+L + +
Sbjct: 111 GELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK---IVHRDLKPENLLLESKSKDAN 167
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEM 348
+++ DFGLS + A+ +D+ T Y APEV YD K DV+S +IL +
Sbjct: 168 IRIIDFGLSTHFE-ASKKXKDKIGTA-----YYIAPEVLHG-TYDEKCDVWSTGVILYIL 220
Query: 349 IEGCPPFPTKQE----KEVPKAYIANERPPFR 376
+ GCPPF E K+V K E P ++
Sbjct: 221 LSGCPPFNGANEYDILKKVEKGKYTFELPQWK 252
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 127/276 (46%), Gaps = 18/276 (6%)
Query: 139 AREVPEYEIDPKELDFSNSVE-ITKG----TFRIASWRGTQV-AVKTLGEEVFTDEDKVK 192
A+E+PE +DP+ + KG F I+ +V A K + + + + +
Sbjct: 1 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 60
Query: 193 AFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKF 252
E+++ + + H +VV F G + + +V E + L K++ AL A +
Sbjct: 61 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY 120
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPV 312
I G YLH NR +IHRDL+ N+ ++ +K+ DFGL+ +++ E + V
Sbjct: 121 LRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---ERKKV 174
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANER 372
C + Y APEV + + +VDV+S I+ ++ G PPF T KE Y+ ++
Sbjct: 175 LC--GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYLRIKK 229
Query: 373 PPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ P H LI+ +P RPT ++L
Sbjct: 230 NEYSIP-KHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 137/286 (47%), Gaps = 31/286 (10%)
Query: 135 HVQNAREVPEYE---IDPKELDFSNSVEITKGTFR-----IASWRGTQVAVKTLGEEVFT 186
H A +VP + DP+EL F+ I KG+F I + VA+K + ++
Sbjct: 4 HSPVAVQVPGMQNNIADPEEL-FTKLERIGKGSFGEVFKGIDNRTQQVVAIKII--DLEE 60
Query: 187 DEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKP 246
ED+++ E+ +L + V ++ G+ + + + I+ EYL G L+ G
Sbjct: 61 AEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA-GPFDE 119
Query: 247 TLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTV 306
+I +G++YLH E IHRD++ +N+L + G +K+ADFG++ L T
Sbjct: 120 FQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQL----TD 172
Query: 307 KEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPP----FPTKQEKE 362
+ + T T + + APEV + YD+K D++S + E+ +G PP P +
Sbjct: 173 TQIKRNTFVGTPF-WMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL 231
Query: 363 VPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+PK PP + +E I+ C +++P RPT +++L
Sbjct: 232 IPK-----NNPP--TLVGDFTKSFKEFIDACLNKDPSFRPTAKELL 270
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 113/256 (44%), Gaps = 14/256 (5%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G Q AVK + EVF E EL + P +V GAV + + I E L
Sbjct: 99 GFQCAVKKVRLEVFRAE--------ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEG 150
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNI-LRDDSGHLK 290
G L +K++G L A+ + G+ YLH R I+H D++ N+ L D H
Sbjct: 151 GSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAA 207
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE 350
+ DFG + L+ K+ + + APEV D KVDV+S ++ M+
Sbjct: 208 LCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 267
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
GC P+ T+ + IA+E PP R A + I++ +EP R + ++ +
Sbjct: 268 GCHPW-TQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGK 326
Query: 411 LDDISDQL-SIKRHWK 425
++ Q+ +K W+
Sbjct: 327 VNRALQQVGGLKSPWR 342
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 13/237 (5%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VA++ + + K + I+E+ ++++ ++PN+V +L + + +V EYL
Sbjct: 45 GQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G L + + + +A + + + +LH N+ +IHRD++ NIL G +K+
Sbjct: 102 GSLTDVVTETCMDEGQIAA-VCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKL 157
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG A E + + + APEV + Y KVD++S ++ EMIEG
Sbjct: 158 TDFGFC-----AQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
PP+ + N P + P A R+ + C + +R + +++L
Sbjct: 213 EPPYLNENPLRALYLIATNGTPELQNPEKLSAI-FRDFLNRCLEMDVEKRGSAKELL 268
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 117/245 (47%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++ + +P G L
Sbjct: 49 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCL 105
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 106 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 162
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FG +KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 163 FGRAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 218 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 274
Query: 411 LDDIS 415
++
Sbjct: 275 FSKMA 279
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 110/241 (45%), Gaps = 18/241 (7%)
Query: 147 IDPKEL--DFSNSVEITKGTF-RIASWR----GTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+DPK DF + KGTF ++ R G A+K L +EV +D+V + E
Sbjct: 3 MDPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 62
Query: 200 LLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARG 259
+LQ RHP + A + V EY G+L +L ++ A + +I
Sbjct: 63 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 122
Query: 260 MNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW 319
+ YLH +++RD++ N++ D GH+K+ DFGL K + + + +
Sbjct: 123 LEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKXFCGTP 174
Query: 320 RYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFRAPT 379
Y APEV ++ +Y VD + +++ EM+ G PF + + + + + E R P
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE---IRFPR 231
Query: 380 T 380
T
Sbjct: 232 T 232
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 16/233 (6%)
Query: 153 DFSNSVEITKGTF-RIASWR----GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
DF + KGTF ++ R G A+K L +EV +D+V + E +LQ RHP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENR 267
+ A + V EY G+L +L ++ A + +I + YLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 268 PEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVY 327
+++RD++ N++ D GH+K+ DFGL K + + + + Y APEV
Sbjct: 125 --DVVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKTFCGTPEYLAPEVL 177
Query: 328 KNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFRAPTT 380
++ +Y VD + +++ EM+ G PF + + + + + E R P T
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE---IRFPRT 227
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 112/242 (46%), Gaps = 34/242 (14%)
Query: 127 AKPSTAPMHVQNAREVPEYEIDPKELD-----FSNSVEITKGTFRI---ASWRGTQ--VA 176
A P TA + VP+Y ID D F E+ +G I +GTQ A
Sbjct: 30 AAPGTASL-------VPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYA 82
Query: 177 VKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRA 236
+K L + V D+ V+ E+ +L ++ HPN+++ T + +V E + G+L
Sbjct: 83 LKVLKKTV--DKKIVRT---EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFD 137
Query: 237 YLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDD---SGHLKVAD 293
+ +KG A I + YLHEN I+HRDL+P N+L LK+AD
Sbjct: 138 RIVEKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIAD 194
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FGLSK+++ +K C Y APE+ + Y +VD++S +I ++ G
Sbjct: 195 FGLSKIVEHQVLMK----TVCGTPG--YCAPEILRGCAYGPEVDMWSVGIITYILLCGFE 248
Query: 354 PF 355
PF
Sbjct: 249 PF 250
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VAVKTL + ++ K F E LL ++H ++V+F G + P+++V EY+ GDL
Sbjct: 46 VAVKTLKD---ASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDL 102
Query: 235 RAYLKQKG-------------ALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNI 281
+L+ G L + + A IA GM YL + +HRDL N
Sbjct: 103 NKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNC 159
Query: 282 LRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW--RYAAPEVYKNEEYDTKVDVF 339
L ++ +K+ DFG+S+ + D T R+ PE ++ T+ DV+
Sbjct: 160 LVGENLLVKIGDFGMSR-----DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW 214
Query: 340 SFALILQEMIE-GCPPFPTKQEKEVPKAYIANE--RPPFRAPTTHYAYGLRELIEDCWSE 396
S ++L E+ G P+ EV + + P P Y EL+ CW
Sbjct: 215 SLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVY-----ELMLGCWQR 269
Query: 397 EPFRRPTFRQILMRLDDIS 415
EP R + I L +++
Sbjct: 270 EPHMRKNIKGIHTLLQNLA 288
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 132/292 (45%), Gaps = 18/292 (6%)
Query: 126 GAKPSTAPMHVQNAREVPEYEIDPKELDFSNSV-EITKGTF-RIASWRGTQVAVKTLGEE 183
G T ++ Q+ ++ D DF + E+ G F ++ + + +V +
Sbjct: 10 GVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKV 69
Query: 184 VFT-DEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRA-YLKQK 241
+ T E++++ ++ E+ +L HPN+V+ L A + I+ E+ G + A L+ +
Sbjct: 70 IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE 129
Query: 242 GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLK 301
L + +NYLH+N+ IIHRDL+ NIL G +K+ADFG+S
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSA--- 183
Query: 302 FANTVKEDRPVTCEETSWRYAAPEVY-----KNEEYDTKVDVFSFALILQEMIEGCPPFP 356
NT R + T + + APEV K+ YD K DV+S + L EM E PP
Sbjct: 184 -KNTRTIQRRDSFIGTPY-WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
Query: 357 TKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
V IA PP A + ++ ++ ++ C + R T Q+L
Sbjct: 242 ELNPMRV-LLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLL 292
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Query: 153 DFSNSVEITKGTF-RIASWR----GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
DF + KGTF ++ R G A+K L +EV +D+V + E +LQ RHP
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 68
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENR 267
+ A + V EY G+L +L ++ A + +I + YLH
Sbjct: 69 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 127
Query: 268 PEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVY 327
+++RD++ N++ D GH+K+ DFGL K + + + + Y APEV
Sbjct: 128 --DVVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKTFCGTPEYLAPEVL 180
Query: 328 KNEEYDTKVDVFSFALILQEMIEGCPPF 355
++ +Y VD + +++ EM+ G PF
Sbjct: 181 EDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Query: 153 DFSNSVEITKGTF-RIASWR----GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
DF + KGTF ++ R G A+K L +EV +D+V + E +LQ RHP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENR 267
+ A + V EY G+L +L ++ A + +I + YLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 268 PEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVY 327
+++RD++ N++ D GH+K+ DFGL K + + + + Y APEV
Sbjct: 125 --DVVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKTFCGTPEYLAPEVL 177
Query: 328 KNEEYDTKVDVFSFALILQEMIEGCPPF 355
++ +Y VD + +++ EM+ G PF
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 18/232 (7%)
Query: 134 MHVQNAREVPEYEIDPKELDFSNSVEITKGTF------RIASWRGTQVAVKTLGEEVFTD 187
+H+ + E+ +F N + +G F R+A G VAVK L EE
Sbjct: 12 VHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLAD--GXLVAVKRLKEE--RT 67
Query: 188 EDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPT 247
+ F E+ ++ H N+++ G T ++V Y+ G + + L+++ +P
Sbjct: 68 QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP 127
Query: 248 L----AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFA 303
L + AL ARG+ YLH++ IIHRD++ +NIL D+ V DFGL+KL+ +
Sbjct: 128 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY- 186
Query: 304 NTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF 355
K+ + APE + K DVF + ++L E+I G F
Sbjct: 187 ---KDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 132/292 (45%), Gaps = 18/292 (6%)
Query: 126 GAKPSTAPMHVQNAREVPEYEIDPKELDFSNSV-EITKGTF-RIASWRGTQVAVKTLGEE 183
G T ++ Q+ ++ D DF + E+ G F ++ + + +V +
Sbjct: 10 GVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKV 69
Query: 184 VFT-DEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRA-YLKQK 241
+ T E++++ ++ E+ +L HPN+V+ L A + I+ E+ G + A L+ +
Sbjct: 70 IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE 129
Query: 242 GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLK 301
L + +NYLH+N+ IIHRDL+ NIL G +K+ADFG+S
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSA--- 183
Query: 302 FANTVKEDRPVTCEETSWRYAAPEVY-----KNEEYDTKVDVFSFALILQEMIEGCPPFP 356
NT R + T + + APEV K+ YD K DV+S + L EM E PP
Sbjct: 184 -KNTRXIQRRDSFIGTPY-WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
Query: 357 TKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
V IA PP A + ++ ++ ++ C + R T Q+L
Sbjct: 242 ELNPMRV-LLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLL 292
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 117/245 (47%), Gaps = 18/245 (7%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L E T K +DE ++ + +P+V + LG ST + ++ + +P G L
Sbjct: 51 VAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCL 107
Query: 235 RAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
Y+++ K + + + + IA+GMNYL + R ++HRDL N+L H+K+ D
Sbjct: 108 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITD 164
Query: 294 FGLSKLLKFANTVKEDRPVTCE--ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE- 350
FG +KLL E++ E + ++ A E + Y + DV+S+ + + E++
Sbjct: 165 FGRAKLLG-----AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 219
Query: 351 GCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMR 410
G P+ E+ ER P T Y ++ CW + RP FR++++
Sbjct: 220 GSKPYDGIPASEISSILEKGERLPQPPICTIDVY---MIMVKCWMIDADSRPKFRELIIE 276
Query: 411 LDDIS 415
++
Sbjct: 277 FSKMA 281
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 16/233 (6%)
Query: 153 DFSNSVEITKGTF-RIASWR----GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
DF + KGTF ++ R G A+K L +EV +D+V + E +LQ RHP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENR 267
+ A + V EY G+L +L ++ A + +I + YLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 268 PEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVY 327
+++RD++ N++ D GH+K+ DFGL K + + + + Y APEV
Sbjct: 125 --DVVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKXFCGTPEYLAPEVL 177
Query: 328 KNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFRAPTT 380
++ +Y VD + +++ EM+ G PF + + + + + E R P T
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE---IRFPRT 227
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 12/169 (7%)
Query: 195 IDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKF 252
I E++LL+++ HPN+V+ L + + +V E+L + DL+ ++ + L +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 108
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ +G+ + H +R ++HRDL+P N+L + G +K+ADFGL++ F V R
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTY 160
Query: 313 TCEETSWRYAAPEVYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
T E + Y APE+ + Y T VD++S I EM+ FP E
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 12/169 (7%)
Query: 195 IDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKF 252
I E++LL+++ HPN+V+ L + + +V E+L + DL+ ++ + L +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 107
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ +G+ + H +R ++HRDL+P N+L + G +K+ADFGL++ F V R
Sbjct: 108 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTY 159
Query: 313 TCEETSWRYAAPEVYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
T E + Y APE+ + Y T VD++S I EM+ FP E
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 61
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E++ + DL+ ++ + L + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R T E + Y APE
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYTHEVVTLWYRAPE 172
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 65
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 176
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 20/230 (8%)
Query: 188 EDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYL----KQKGA 243
E++++ ++ E+ +L HPN+V+ L A + I+ E+ G + A + +
Sbjct: 48 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTE 107
Query: 244 LKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFA 303
+ + K LD +NYLH+N+ IIHRDL+ NIL G +K+ADFG+S K
Sbjct: 108 SQIQVVCKQTLD---ALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSA--KNT 159
Query: 304 NTVKEDRPVTCEETSWRYAAPEVY-----KNEEYDTKVDVFSFALILQEMIEGCPPFPTK 358
T + R W APEV K+ YD K DV+S + L EM E PP
Sbjct: 160 RTXIQRRDSFIGTPYW--MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 217
Query: 359 QEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
V IA PP A + ++ ++ ++ C + R T Q+L
Sbjct: 218 NPMRV-LLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLL 266
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 16/233 (6%)
Query: 153 DFSNSVEITKGTF-RIASWR----GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
DF + KGTF ++ R G A+K L +EV +D+V + E +LQ RHP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENR 267
+ A + V EY G+L +L ++ A + +I + YLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 268 PEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVY 327
+++RD++ N++ D GH+K+ DFGL K + + + + Y APEV
Sbjct: 125 --DVVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKXFCGTPEYLAPEVL 177
Query: 328 KNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFRAPTT 380
++ +Y VD + +++ EM+ G PF + + + + + E R P T
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE---IRFPRT 227
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 16/233 (6%)
Query: 153 DFSNSVEITKGTF-RIASWR----GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
DF + KGTF ++ R G A+K L +EV +D+V + E +LQ RHP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENR 267
+ A + V EY G+L +L ++ A + +I + YLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 268 PEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVY 327
+++RD++ N++ D GH+K+ DFGL K + + + + Y APEV
Sbjct: 125 --DVVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKXFCGTPEYLAPEVL 177
Query: 328 KNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFRAPTT 380
++ +Y VD + +++ EM+ G PF + + + + + E R P T
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE---IRFPRT 227
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 110/237 (46%), Gaps = 13/237 (5%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VA++ + + K + I+E+ ++++ ++PN+V +L + + +V EYL
Sbjct: 46 GQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 102
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G L + + + +A + + + +LH N+ +IHRD++ NIL G +K+
Sbjct: 103 GSLTDVVTETCMDEGQIAA-VCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKL 158
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG A E + + + APEV + Y KVD++S ++ EMIEG
Sbjct: 159 TDFGFC-----AQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
PP+ + N P + P A R+ + C + +R + ++++
Sbjct: 214 EPPYLNENPLRALYLIATNGTPELQNPEKLSAI-FRDFLNRCLEMDVEKRGSAKELI 269
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 64
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 175
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 211
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 63
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 174
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 66
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 177
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 213
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 176 AVKTLGEEVFTDEDKVKAFIDELALL-QKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
A+K + +E+ D++ + E + Q HP +V + + V EY+ GDL
Sbjct: 49 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 108
Query: 235 RAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADF 294
+++++ L A ++ +I+ +NYLHE II+RDL+ N+L D GH+K+ D+
Sbjct: 109 MFHMQRQRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDY 165
Query: 295 GLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPP 354
G+ K ++ + + Y APE+ + E+Y VD ++ +++ EM+ G P
Sbjct: 166 GMCK-----EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 220
Query: 355 F 355
F
Sbjct: 221 F 221
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 65
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 176
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 131/292 (44%), Gaps = 18/292 (6%)
Query: 126 GAKPSTAPMHVQNAREVPEYEIDPKELDFSNSV-EITKGTF-RIASWRGTQVAVKTLGEE 183
G T ++ Q+ ++ D DF + E+ G F ++ + + +V +
Sbjct: 10 GVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKV 69
Query: 184 VFT-DEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRA-YLKQK 241
+ T E++++ ++ E+ +L HPN+V+ L A + I+ E+ G + A L+ +
Sbjct: 70 IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE 129
Query: 242 GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLK 301
L + +NYLH+N+ IIHRDL+ NIL G +K+ADFG+S
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSA--- 183
Query: 302 FANTVKEDRPVTCEETSWRYAAPEVY-----KNEEYDTKVDVFSFALILQEMIEGCPPFP 356
NT R T + + APEV K+ YD K DV+S + L EM E PP
Sbjct: 184 -KNTRXIQRRDXFIGTPY-WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
Query: 357 TKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
V IA PP A + ++ ++ ++ C + R T Q+L
Sbjct: 242 ELNPMRV-LLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLL 292
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 62
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 173
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 65
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 176
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 64
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 175
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 211
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 15/219 (6%)
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFA 253
++E+A+L+ + HPN+++ +V E G+L + + A
Sbjct: 83 LLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVII 142
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNIL---RDDSGHLKVADFGLSKLLKFANTVKEDR 310
+ G+ YLH++ I+HRDL+P N+L ++ +K+ DFGLS + + +KE R
Sbjct: 143 KQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE-R 198
Query: 311 PVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIAN 370
T Y APEV + ++YD K DV+S +IL ++ G PPF + ++E+ + +
Sbjct: 199 LGTA-----YYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRK-VEK 251
Query: 371 ERPPFRAPT-THYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ F +P + + G ++LI+ + RR + +Q L
Sbjct: 252 GKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQAL 290
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 61
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 172
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 62
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 173
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 63
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 174
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 63
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 123 HR---VLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 174
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 62
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 173
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 176 AVKTLGEEVFTDEDKVKAFIDELALL-QKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
A+K + +E+ D++ + E + Q HP +V + + V EY+ GDL
Sbjct: 34 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 93
Query: 235 RAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADF 294
+++++ L A ++ +I+ +NYLHE II+RDL+ N+L D GH+K+ D+
Sbjct: 94 MFHMQRQRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDY 150
Query: 295 GLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPP 354
G+ K ++ + + Y APE+ + E+Y VD ++ +++ EM+ G P
Sbjct: 151 GMCK-----EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 205
Query: 355 F 355
F
Sbjct: 206 F 206
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 61
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 172
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 64
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 124 HR---VLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 175
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 211
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 18/275 (6%)
Query: 140 REVPEYEIDPKELDFSNSVE-ITKG----TFRIASWRGTQV-AVKTLGEEVFTDEDKVKA 193
+E+PE +DP+ + KG F I+ +V A K + + + + +
Sbjct: 26 KEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK 85
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFA 253
E+++ + + H +VV F G + + +V E + L K++ AL A +
Sbjct: 86 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL 145
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVT 313
I G YLH NR +IHRDL+ N+ ++ +K+ DFGL+ +++ E + V
Sbjct: 146 RQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---ERKKVL 199
Query: 314 CEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERP 373
C + Y APEV + + +VDV+S I+ ++ G PPF T KE Y+ ++
Sbjct: 200 C--GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYLRIKKN 254
Query: 374 PFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ P H LI+ +P RPT ++L
Sbjct: 255 EYSIP-KHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 18/275 (6%)
Query: 140 REVPEYEIDPKELDFSNSVE-ITKG----TFRIASWRGTQV-AVKTLGEEVFTDEDKVKA 193
+E+PE +DP+ + KG F I+ +V A K + + + + +
Sbjct: 28 KEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK 87
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFA 253
E+++ + + H +VV F G + + +V E + L K++ AL A +
Sbjct: 88 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL 147
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVT 313
I G YLH NR +IHRDL+ N+ ++ +K+ DFGL+ +++ E + V
Sbjct: 148 RQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---ERKKVL 201
Query: 314 CEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERP 373
C + Y APEV + + +VDV+S I+ ++ G PPF T KE Y+ ++
Sbjct: 202 C--GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYLRIKKN 256
Query: 374 PFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ P H LI+ +P RPT ++L
Sbjct: 257 EYSIP-KHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 126/276 (45%), Gaps = 18/276 (6%)
Query: 139 AREVPEYEIDPKELDFSNSVE-ITKG----TFRIASWRGTQV-AVKTLGEEVFTDEDKVK 192
A+E+PE +DP+ + KG F I+ +V A K + + + + +
Sbjct: 3 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 62
Query: 193 AFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKF 252
E+++ + + H +VV F G + + +V E + L K++ AL A +
Sbjct: 63 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY 122
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPV 312
I G YLH NR +IHRDL+ N+ ++ +K+ DFGL+ +++ E +
Sbjct: 123 LRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---ERKKT 176
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANER 372
C + Y APEV + + +VDV+S I+ ++ G PPF T KE Y+ ++
Sbjct: 177 LC--GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYLRIKK 231
Query: 373 PPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ P H LI+ +P RPT ++L
Sbjct: 232 NEYSIP-KHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 62
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 173
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 176 AVKTLGEEVFTDEDKVKAFIDELALL-QKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
A+K + +E+ D++ + E + Q HP +V + + V EY+ GDL
Sbjct: 38 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 97
Query: 235 RAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADF 294
+++++ L A ++ +I+ +NYLHE II+RDL+ N+L D GH+K+ D+
Sbjct: 98 MFHMQRQRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDY 154
Query: 295 GLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPP 354
G+ K ++ + + Y APE+ + E+Y VD ++ +++ EM+ G P
Sbjct: 155 GMCK-----EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 209
Query: 355 F 355
F
Sbjct: 210 F 210
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 126/276 (45%), Gaps = 18/276 (6%)
Query: 139 AREVPEYEIDPKELDFSNSVE-ITKG----TFRIASWRGTQV-AVKTLGEEVFTDEDKVK 192
A+E+PE +DP+ + KG F I+ +V A K + + + + +
Sbjct: 7 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 66
Query: 193 AFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKF 252
E+++ + + H +VV F G + + +V E + L K++ AL A +
Sbjct: 67 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY 126
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPV 312
I G YLH NR +IHRDL+ N+ ++ +K+ DFGL+ +++ E +
Sbjct: 127 LRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---ERKKT 180
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANER 372
C + Y APEV + + +VDV+S I+ ++ G PPF T KE Y+ ++
Sbjct: 181 LC--GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYLRIKK 235
Query: 373 PPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ P H LI+ +P RPT ++L
Sbjct: 236 NEYSIP-KHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 132/283 (46%), Gaps = 46/283 (16%)
Query: 168 ASWRGTQVAVKTLGEEVFTDEDKVKAFID-ELALLQKIRHPNVVQFLGAVT----QSTPM 222
SW+G VAVK +F+ D+ F + EL +RH N++ F+ + ST +
Sbjct: 56 GSWQGENVAVK-----IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 110
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLH------ENRPEAIIHRDL 276
++T Y G L YL Q L ++ L IA G+ +LH + +P AI HRDL
Sbjct: 111 WLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP-AIAHRDL 168
Query: 277 EPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVY----KNEEY 332
+ NIL +G +AD GL+ ++ +T + D + RY APEV + + +
Sbjct: 169 KSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCF 227
Query: 333 DT--KVDVFSFALILQE----MIEGC------PPF----PTKQEKEVPKAYIA--NERP- 373
D+ +VD+++F L+L E M+ PPF P E + + +RP
Sbjct: 228 DSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPN 287
Query: 374 -PFRAPTTHYAYGLRELIEDCWSEEPFRRPT---FRQILMRLD 412
P R + L +L+++CW + P R T ++ L ++D
Sbjct: 288 IPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 330
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 63
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L DL+ ++ + L + + +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 123 HR---VLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 174
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 126/276 (45%), Gaps = 18/276 (6%)
Query: 139 AREVPEYEIDPKELDFSNSVE-ITKG----TFRIASWRGTQV-AVKTLGEEVFTDEDKVK 192
A+E+PE +DP+ + KG F I+ +V A K + + + + +
Sbjct: 3 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 62
Query: 193 AFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKF 252
E+++ + + H +VV F G + + +V E + L K++ AL A +
Sbjct: 63 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY 122
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPV 312
I G YLH NR +IHRDL+ N+ ++ +K+ DFGL+ +++ E +
Sbjct: 123 LRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---ERKKT 176
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANER 372
C + Y APEV + + +VDV+S I+ ++ G PPF T KE Y+ ++
Sbjct: 177 LC--GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYLRIKK 231
Query: 373 PPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ P H LI+ +P RPT ++L
Sbjct: 232 NEYSIP-KHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 65
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L DL+ ++ + L + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 125 HR---VLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 176
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 24/180 (13%)
Query: 195 IDELALLQKIR---HPNVVQFLGAVTQS-----TPMMIVTEYLPKGDLRAYLKQKGALKP 246
+ E+ALL+++ HPNVV+ + S + +V E++ + DLR YL + A P
Sbjct: 51 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDK--APPP 107
Query: 247 TLAVKFALDIAR----GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKF 302
L + D+ R G+++LH N I+HRDL+P NIL G +K+ADFGL+++ +
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSY 164
Query: 303 ANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKE 362
+ PV T W Y APEV Y T VD++S I EM P F E +
Sbjct: 165 QMALA---PVVV--TLW-YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 218
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 114/237 (48%), Gaps = 13/237 (5%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G +VA++ + + K + I+E+ ++++ ++PN+V +L + + +V EYL
Sbjct: 46 GQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 102
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
G L + + + +A + + + +LH N+ +IHR+++ NIL G +K+
Sbjct: 103 GSLTDVVTETCMDEGQIAA-VCRECLQALEFLHSNQ---VIHRNIKSDNILLGMDGSVKL 158
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFG + T ++ + T T + + APEV + Y KVD++S ++ EMIEG
Sbjct: 159 TDFGFCAQI----TPEQSKRSTMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
Query: 352 CPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
PP+ + N P + P A R+ + C + +R + ++++
Sbjct: 214 EPPYLNENPLRALYLIATNGTPELQNPEKLSAI-FRDFLNRCLEMDVEKRGSAKELI 269
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 32/265 (12%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS--TPMMIVTEYL 229
G VAVK L + + E+ +L+ + H +++++ G + +V EY+
Sbjct: 43 GEMVAVKALKADC--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 230 PKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHL 289
P G LR YL + L + FA I GM YLH + IHR+L N+L D+ +
Sbjct: 101 PLGSLRDYLPRHSIGLAQLLL-FAQQICEGMAYLHS---QHYIHRNLAARNVLLDNDRLV 156
Query: 290 KVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMI 349
K+ DFGL+K + + R W APE K ++ DV+SF + L E++
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFW--YAPECLKEYKFYYASDVWSFGVTLYELL 214
Query: 350 EGC-----PPFPTKQEKEVPKAYIANER------------PPFRAPTTHYAYGLRELIED 392
C PP + + + + R P + P Y L+++
Sbjct: 215 THCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVY-----HLMKN 269
Query: 393 CWSEEPFRRPTFRQILMRLDDISDQ 417
CW E RPTF ++ L + ++
Sbjct: 270 CWETEASFRPTFENLIPILKTVHEK 294
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 93/184 (50%), Gaps = 15/184 (8%)
Query: 176 AVKTLGEEVFTDEDKVKAFIDELALL-QKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
A++ + +E+ D++ + E + Q HP +V + + V EY+ GDL
Sbjct: 81 AMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 140
Query: 235 RAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADF 294
+++++ L A ++ +I+ +NYLHE II+RDL+ N+L D GH+K+ D+
Sbjct: 141 MFHMQRQRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDY 197
Query: 295 GLSKLLKFANTVKEDRPVTCEET---SWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
G+ K + RP T + Y APE+ + E+Y VD ++ +++ EM+ G
Sbjct: 198 GMCK--------EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 249
Query: 352 CPPF 355
PF
Sbjct: 250 RSPF 253
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 24/180 (13%)
Query: 195 IDELALLQKIR---HPNVVQFLGAVTQS-----TPMMIVTEYLPKGDLRAYLKQKGALKP 246
+ E+ALL+++ HPNVV+ + S + +V E++ + DLR YL + A P
Sbjct: 51 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDK--APPP 107
Query: 247 TLAVKFALDIAR----GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKF 302
L + D+ R G+++LH N I+HRDL+P NIL G +K+ADFGL+++ +
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSY 164
Query: 303 ANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKE 362
+ PV T W Y APEV Y T VD++S I EM P F E +
Sbjct: 165 QMALD---PVVV--TLW-YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 218
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 32/265 (12%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS--TPMMIVTEYL 229
G VAVK L + + E+ +L+ + H +++++ G + +V EY+
Sbjct: 43 GEMVAVKALKADC--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 230 PKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHL 289
P G LR YL + L + FA I GM YLH + IHR+L N+L D+ +
Sbjct: 101 PLGSLRDYLPRHSIGLAQLLL-FAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLV 156
Query: 290 KVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMI 349
K+ DFGL+K + + R W APE K ++ DV+SF + L E++
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFW--YAPECLKEYKFYYASDVWSFGVTLYELL 214
Query: 350 EGC-----PPFPTKQEKEVPKAYIANER------------PPFRAPTTHYAYGLRELIED 392
C PP + + + + R P + P Y L+++
Sbjct: 215 THCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVY-----HLMKN 269
Query: 393 CWSEEPFRRPTFRQILMRLDDISDQ 417
CW E RPTF ++ L + ++
Sbjct: 270 CWETEASFRPTFENLIPILKTVHEK 294
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 24/180 (13%)
Query: 195 IDELALLQKIR---HPNVVQFLGAVTQS-----TPMMIVTEYLPKGDLRAYLKQKGALKP 246
+ E+ALL+++ HPNVV+ + S + +V E++ + DLR YL + A P
Sbjct: 59 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDK--APPP 115
Query: 247 TLAVKFALDIAR----GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKF 302
L + D+ R G+++LH N I+HRDL+P NIL G +K+ADFGL+++ +
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSY 172
Query: 303 ANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKE 362
+ PV T W Y APEV Y T VD++S I EM P F E +
Sbjct: 173 QMALT---PVVV--TLW-YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 226
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 22/241 (9%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K + +E E K + +E+A+L KI+HPN+V + ++ + + G+L
Sbjct: 46 VAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 235 RAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILR---DDSGHLKV 291
+ +KG A + + + YLH+ I+HRDL+P N+L D+ + +
Sbjct: 104 FDRIVEKGFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
+DFGLSK+ + + C Y APEV + Y VD +S +I ++ G
Sbjct: 161 SDFGLSKMEDPGSVLS----TACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
Query: 352 CPPFPTKQE----KEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
PPF + + +++ KA + P + + +R L+E ++P +R T Q
Sbjct: 215 YPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLME----KDPEKRFTCEQA 270
Query: 408 L 408
L
Sbjct: 271 L 271
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 126/277 (45%), Gaps = 22/277 (7%)
Query: 151 ELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVV 210
EL N + +G +R+ + VA+K L + T++ + + E ++ ++ +P +V
Sbjct: 343 ELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIV 399
Query: 211 QFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPE 269
+ +G V Q+ +M+V E G L +L K P V L ++ GM YL E
Sbjct: 400 RLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN-- 456
Query: 270 AIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN 329
+HR+L N+L + + K++DFGLSK L ++ R W APE
Sbjct: 457 -FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY--APECINF 513
Query: 330 EEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIAN----ERPPFRAPTTHYAY 384
++ ++ DV+S+ + + E + G P+ + EV A+I E PP P YA
Sbjct: 514 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-MAFIEQGKRMECPP-ECPPELYA- 570
Query: 385 GLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLSIK 421
L+ DCW + RP F + R+ L+ K
Sbjct: 571 ----LMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 603
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 130/282 (46%), Gaps = 43/282 (15%)
Query: 168 ASWRGTQVAVKTLGEEVFTDEDKVKAFID-ELALLQKIRHPNVVQFLGAVT----QSTPM 222
SW+G VAVK +F+ D+ F + EL +RH N++ F+ + ST +
Sbjct: 27 GSWQGENVAVK-----IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLH------ENRPEAIIHRDL 276
++T Y G L YL Q L ++ L IA G+ +LH + +P AI HRDL
Sbjct: 82 WLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP-AIAHRDL 139
Query: 277 EPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVY----KNEEY 332
+ NIL +G +AD GL+ ++ +T + D + RY APEV + + +
Sbjct: 140 KSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCF 198
Query: 333 DT--KVDVFSFALILQE----MIEGC------PPF----PTKQEKEVPKAYIA--NERP- 373
D+ +VD+++F L+L E M+ PPF P E + + +RP
Sbjct: 199 DSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPN 258
Query: 374 -PFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
P R + L +L+++CW + P R T +I L I
Sbjct: 259 IPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 65
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L DL+ ++ + L + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 176
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 64
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L DL+ ++ + L + + +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 175
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 211
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 62
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E+L + DL+ ++ + L + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 122 HR---VLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 173
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 22/241 (9%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K + +E E K + +E+A+L KI+HPN+V + ++ + + G+L
Sbjct: 46 VAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 235 RAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILR---DDSGHLKV 291
+ +KG A + + + YLH+ I+HRDL+P N+L D+ + +
Sbjct: 104 FDRIVEKGFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
+DFGLSK+ + + C Y APEV + Y VD +S +I ++ G
Sbjct: 161 SDFGLSKMEDPGSVLS----TACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
Query: 352 CPPFPTKQE----KEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
PPF + + +++ KA + P + + +R L+E ++P +R T Q
Sbjct: 215 YPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLME----KDPEKRFTCEQA 270
Query: 408 L 408
L
Sbjct: 271 L 271
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 132/283 (46%), Gaps = 46/283 (16%)
Query: 168 ASWRGTQVAVKTLGEEVFTDEDKVKAFID-ELALLQKIRHPNVVQFLGAVT----QSTPM 222
SW+G VAVK +F+ D+ F + EL +RH N++ F+ + ST +
Sbjct: 27 GSWQGENVAVK-----IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLH------ENRPEAIIHRDL 276
++T Y G L YL Q L ++ L IA G+ +LH + +P AI HRDL
Sbjct: 82 WLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP-AIAHRDL 139
Query: 277 EPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVY----KNEEY 332
+ NIL +G +AD GL+ ++ +T + D + RY APEV + + +
Sbjct: 140 KSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCF 198
Query: 333 DT--KVDVFSFALILQE----MIEGC------PPF----PTKQEKEVPKAYIA--NERP- 373
D+ +VD+++F L+L E M+ PPF P E + + +RP
Sbjct: 199 DSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPN 258
Query: 374 -PFRAPTTHYAYGLRELIEDCWSEEPFRRPT---FRQILMRLD 412
P R + L +L+++CW + P R T ++ L ++D
Sbjct: 259 IPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 301
>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266.
pdb|4GMR|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266
Length = 169
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 6/103 (5%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
RL+ A G+ D +K+LL++G DVN D D +T LH+AA G +VV+LLLS+GAD + +
Sbjct: 7 RLIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAK 66
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGAKPST------APMHV 136
D G TPL A H +V+KLL GA P+ P+H+
Sbjct: 67 DSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHL 109
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 57/97 (58%)
Query: 36 DPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGAD 95
D + L A G + +K LL G D N +D D +T LH+AA G +VV+LLLS+GAD
Sbjct: 36 DGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGAD 95
Query: 96 VDPEDRWGSTPLADAVYYKHHDVIKLLEEHGAKPSTA 132
+ +D G TPL A H +V+KLL GA P+T+
Sbjct: 96 PNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNTS 132
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%)
Query: 36 DPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGAD 95
D + L A G + +K LL G D N +D D +T LH+AA G +VV+LLLS+GAD
Sbjct: 69 DGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGAD 128
Query: 96 VDPEDRWGSTPLADAVYYKHHDVIKLLEEHGA 127
+ D G TPL A + + +V+KLLE+ G
Sbjct: 129 PNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 22/241 (9%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K + +E E K + +E+A+L KI+HPN+V + ++ + + G+L
Sbjct: 46 VAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 235 RAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILR---DDSGHLKV 291
+ +KG A + + + YLH+ I+HRDL+P N+L D+ + +
Sbjct: 104 FDRIVEKGFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
+DFGLSK+ + + C Y APEV + Y VD +S +I ++ G
Sbjct: 161 SDFGLSKMEDPGSVLS----TACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
Query: 352 CPPFPTKQE----KEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
PPF + + +++ KA + P + + +R L+E ++P +R T Q
Sbjct: 215 YPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLME----KDPEKRFTCEQA 270
Query: 408 L 408
L
Sbjct: 271 L 271
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 91/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 60 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 119
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 120 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 176
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R + T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 177 FGTAKVL--SPESKQARANSFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 233
Query: 354 PFPTKQE 360
PF E
Sbjct: 234 PFRAGNE 240
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 91/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 56 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 115
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 116 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 172
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R + T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 173 FGTAKVL--SPESKQARANSFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 229
Query: 354 PFPTKQE 360
PF E
Sbjct: 230 PFRAGNE 236
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 175
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 176 FGTAKVL--SPESKQARANXFVGTA-QYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLP 232
Query: 354 PFPTKQE 360
PF E
Sbjct: 233 PFRAGNE 239
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 24/180 (13%)
Query: 195 IDELALLQKIR---HPNVVQFLGAVTQS-----TPMMIVTEYLPKGDLRAYLKQKGALKP 246
+ E+ALL+++ HPNVV+ + S + +V E++ + DLR YL + A P
Sbjct: 51 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDK--APPP 107
Query: 247 TLAVKFALDIAR----GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKF 302
L + D+ R G+++LH N I+HRDL+P NIL G +K+ADFGL+++ +
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSY 164
Query: 303 ANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKE 362
+ PV T W Y APEV Y T VD++S I EM P F E +
Sbjct: 165 QMALF---PVVV--TLW-YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 218
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 14/188 (7%)
Query: 172 GTQVAVKTLGEEVFTDEDKV--KAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYL 229
G VA+K E +D+DK+ K + E+ LL+++RH N+V L + +V E++
Sbjct: 50 GRIVAIKKFLE---SDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV 106
Query: 230 PKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHL 289
L L + K+ I G+ + H + IIHRD++P NIL SG +
Sbjct: 107 DHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVV 163
Query: 290 KVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNE-EYDTKVDVFSFALILQEM 348
K+ DFG ++ L V +D T W Y APE+ + +Y VDV++ ++ EM
Sbjct: 164 KLCDFGFARTLAAPGEVYDDEVA----TRW-YRAPELLVGDVKYGKAVDVWAIGCLVTEM 218
Query: 349 IEGCPPFP 356
G P FP
Sbjct: 219 FMGEPLFP 226
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 159 EITKGTFRIASWRGTQ-----VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
+I G F +A + VAVK + DE+ + I+ +L RHPN+V+F
Sbjct: 27 DIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL----RHPNIVRFK 82
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIH 273
+ T + I+ EY G+L + G A F + G++Y H + I H
Sbjct: 83 EVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ---ICH 139
Query: 274 RDLEPSNILRDDS--GHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEE 331
RDL+ N L D S LK+ DFG SK ++V +P + T Y APEV +E
Sbjct: 140 RDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKSTVGTP-AYIAPEVLLRQE 193
Query: 332 YDTKV-DVFSFALILQEMIEGCPPFPTKQEKEVPKAY 367
YD K+ DV+S + L M+ G PF ++ E P+ Y
Sbjct: 194 YDGKIADVWSCGVTLYVMLVGAYPF---EDPEEPRDY 227
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTL----AVKF 252
E +L K+ +V A T + +V + GD+R ++ P A+ +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPV 312
I G+ +LH+ II+RDL+P N+L DD G+++++D GL+ LK T +
Sbjct: 295 TAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEK 361
T + APE+ EEYD VD F+ + L EMI PF + EK
Sbjct: 352 TPG-----FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTL----AVKF 252
E +L K+ +V A T + +V + GD+R ++ P A+ +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPV 312
I G+ +LH+ II+RDL+P N+L DD G+++++D GL+ LK T +
Sbjct: 295 TAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEK 361
T + APE+ EEYD VD F+ + L EMI PF + EK
Sbjct: 352 TPG-----FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTL----AVKF 252
E +L K+ +V A T + +V + GD+R ++ P A+ +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPV 312
I G+ +LH+ II+RDL+P N+L DD G+++++D GL+ LK T +
Sbjct: 295 TAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEK 361
T + APE+ EEYD VD F+ + L EMI PF + EK
Sbjct: 352 TPG-----FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 95/198 (47%), Gaps = 27/198 (13%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQF------LGAVTQSTPMMIV 225
G QVA+K +E+ + + E+ +++K+ HPNVV L + + ++
Sbjct: 39 GEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLA 96
Query: 226 TEYLPKGDLRAYLKQ---KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNI- 281
EY GDLR YL Q LK DI+ + YLHENR IIHRDL+P NI
Sbjct: 97 MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIV 153
Query: 282 LRDDSGHL--KVADFGLSKLLKFANTVKEDRPVTCEE--TSWRYAAPEVYKNEEYDTKVD 337
L+ L K+ D G +K L D+ C E + +Y APE+ + ++Y VD
Sbjct: 154 LQPGPQRLIHKIIDLGYAKEL--------DQGELCTEFVGTLQYLAPELLEQKKYTVTVD 205
Query: 338 VFSFALILQEMIEGCPPF 355
+SF + E I G PF
Sbjct: 206 YWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 95/198 (47%), Gaps = 27/198 (13%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQF------LGAVTQSTPMMIV 225
G QVA+K +E+ + + E+ +++K+ HPNVV L + + ++
Sbjct: 40 GEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLA 97
Query: 226 TEYLPKGDLRAYLKQ---KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNI- 281
EY GDLR YL Q LK DI+ + YLHENR IIHRDL+P NI
Sbjct: 98 MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIV 154
Query: 282 LRDDSGHL--KVADFGLSKLLKFANTVKEDRPVTCEE--TSWRYAAPEVYKNEEYDTKVD 337
L+ L K+ D G +K L D+ C E + +Y APE+ + ++Y VD
Sbjct: 155 LQPGPQRLIHKIIDLGYAKEL--------DQGELCTEFVGTLQYLAPELLEQKKYTVTVD 206
Query: 338 VFSFALILQEMIEGCPPF 355
+SF + E I G PF
Sbjct: 207 YWSFGTLAFECITGFRPF 224
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGC 118
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 175
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R + T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 176 FGTAKVL--SPESKQARANSFVGTA-QYVSPELLTEKSASKSSDLWALGCIIYQLVAGLP 232
Query: 354 PFPTKQE 360
PF E
Sbjct: 233 PFRAGNE 239
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTL----AVKF 252
E +L K+ +V A T + +V + GD+R ++ P A+ +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPV 312
I G+ +LH+ II+RDL+P N+L DD G+++++D GL+ LK T +
Sbjct: 295 TAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEK 361
T + APE+ EEYD VD F+ + L EMI PF + EK
Sbjct: 352 TPG-----FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 116
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 117 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 173
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 174 FGTAKVL--SPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230
Query: 354 PFPTKQE 360
PF E
Sbjct: 231 PFRAGNE 237
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 64 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGE 123
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 124 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 180
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 181 FGTAKVL--SPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 237
Query: 354 PFPTKQE 360
PF E
Sbjct: 238 PFRAGNE 244
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 116
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 117 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 173
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 174 FGTAKVL--SPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230
Query: 354 PFPTKQE 360
PF E
Sbjct: 231 PFRAGNE 237
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 15/162 (9%)
Query: 200 LLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARG 259
L Q HP+++ + + S+ M +V + + KG+L YL +K AL +
Sbjct: 153 LRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEA 212
Query: 260 MNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW 319
+++LH N I+HRDL+P NIL DD+ ++++DFG S L+ ++E C
Sbjct: 213 VSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE----LCGTPG- 264
Query: 320 RYAAPEVYK------NEEYDTKVDVFSFALILQEMIEGCPPF 355
Y APE+ K + Y +VD+++ +IL ++ G PPF
Sbjct: 265 -YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 116
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 117 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 173
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 174 FGTAKVL--SPESKQARANAFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230
Query: 354 PFPTKQE 360
PF E
Sbjct: 231 PFRAGNE 237
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 62 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 121
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 122 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 178
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 179 FGTAKVL--SPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 235
Query: 354 PFPTKQE 360
PF E
Sbjct: 236 PFRAGNE 242
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 153 DFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
+F +I +GT+ + G VA+K + + T+ A I E++LL+++ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHP 65
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHE 265
N+V+ L + + +V E++ + DL+ ++ + L + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 266 NRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
+R ++HRDL+P N+L + G +K+ADFGL++ F V R E + Y APE
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPV---RTYXHEVVTLWYRAPE 176
Query: 326 VYKN-EEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
+ + Y T VD++S I EM+ FP E
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 175
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 176 FGTAKVL--SPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232
Query: 354 PFPTKQE 360
PF E
Sbjct: 233 PFRAGNE 239
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 175
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 176 FGTAKVL--SPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232
Query: 354 PFPTKQE 360
PF E
Sbjct: 233 PFRAGNE 239
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 116
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 117 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 173
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 174 FGTAKVL--SPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230
Query: 354 PFPTKQE 360
PF E
Sbjct: 231 PFRAGNE 237
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 109/223 (48%), Gaps = 26/223 (11%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ +L+ + HPN+++ M IV E G+L + A L+ + ++
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129
Query: 257 ARGM-NYLHENRPEAIIHRDLEPSNIL-RDDSGH--LKVADFGLSKLLKFANTVKEDRPV 312
+ M N L + ++H+DL+P NIL +D S H +K+ DFGL++L K D
Sbjct: 130 MKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF------KSDEHS 183
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANER 372
T + Y APEV+K + K D++S +++ ++ GC PF +EV ++
Sbjct: 184 TNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV------QQK 236
Query: 373 PPFRAPTTHYAYGLR-------ELIEDCWSEEPFRRPTFRQIL 408
++ P +YA R +L++ +++P RRP+ Q+L
Sbjct: 237 ATYKEP--NYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVL 277
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 36 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 95
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 96 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 152
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 153 FGTAKVL--SPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 209
Query: 354 PFPTKQE 360
PF E
Sbjct: 210 PFRAGNE 216
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 41 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 100
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 101 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 157
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 158 FGTAKVL--SPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 214
Query: 354 PFPTKQE 360
PF E
Sbjct: 215 PFRAGNE 221
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 60 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 119
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 120 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 176
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 177 FGTAKVL--SPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 233
Query: 354 PFPTKQE 360
PF E
Sbjct: 234 PFRAGNE 240
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 110/262 (41%), Gaps = 38/262 (14%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VAVK L E E + F E LL ++H ++V+F G T+ P+++V EY+ GDL
Sbjct: 74 VAVKALKE---ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 130
Query: 235 RAYLKQKG-----------------ALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLE 277
+L+ G L LAV A +A GM YL +HRDL
Sbjct: 131 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV--ASQVAAGMVYLAGLH---FVHRDLA 185
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVD 337
N L +K+ DFG+S+ + + + R+ PE ++ T+ D
Sbjct: 186 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM---LPIRWMPPESILYRKFTTESD 242
Query: 338 VFSFALILQEMIE-GCPPFPTKQEKEVPKAYIAN---ERPPFRAPTTHYAYGLRELIEDC 393
V+SF ++L E+ G P+ E ERP P + ++ C
Sbjct: 243 VWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVY------AIMRGC 296
Query: 394 WSEEPFRRPTFRQILMRLDDIS 415
W EP +R + + + RL ++
Sbjct: 297 WQREPQQRHSIKDVHARLQALA 318
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 175
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 176 FGTAKVL--SPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232
Query: 354 PFPTKQE 360
PF E
Sbjct: 233 PFRAGNE 239
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 175
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 176 FGTAKVL--SPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232
Query: 354 PFPTKQE 360
PF E
Sbjct: 233 PFRAGNE 239
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 34 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 93
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 94 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 150
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 151 FGTAKVL--SPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 207
Query: 354 PFPTKQE 360
PF E
Sbjct: 208 PFRAGNE 214
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 35 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 94
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 95 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 151
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 152 FGTAKVL--SPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 208
Query: 354 PFPTKQE 360
PF E
Sbjct: 209 PFRAGNE 215
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 110/262 (41%), Gaps = 38/262 (14%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VAVK L E E + F E LL ++H ++V+F G T+ P+++V EY+ GDL
Sbjct: 45 VAVKALKE---ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 101
Query: 235 RAYLKQKG-----------------ALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLE 277
+L+ G L LAV A +A GM YL +HRDL
Sbjct: 102 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV--ASQVAAGMVYLAGLH---FVHRDLA 156
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVD 337
N L +K+ DFG+S+ + + + R+ PE ++ T+ D
Sbjct: 157 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM---LPIRWMPPESILYRKFTTESD 213
Query: 338 VFSFALILQEMIE-GCPPFPTKQEKEVPKAYIAN---ERPPFRAPTTHYAYGLRELIEDC 393
V+SF ++L E+ G P+ E ERP P + ++ C
Sbjct: 214 VWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVY------AIMRGC 267
Query: 394 WSEEPFRRPTFRQILMRLDDIS 415
W EP +R + + + RL ++
Sbjct: 268 WQREPQQRHSIKDVHARLQALA 289
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 56 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 115
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 116 LLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITD 172
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 173 FGTAKVL--SPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 229
Query: 354 PFPTKQE 360
PF E
Sbjct: 230 PFRAGNE 236
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 79/138 (57%), Gaps = 11/138 (7%)
Query: 217 TQSTPMMIVTEYLPKGDLRAYL-KQKG-ALKPTLAVKFALDIARGMNYLHENRPEAIIHR 274
+++ + I E+ KG L ++ K++G L LA++ I +G++Y+H + +IHR
Sbjct: 104 SKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LIHR 160
Query: 275 DLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDT 334
DL+PSNI D+ +K+ DFGL ++K D T + + RY +PE +++Y
Sbjct: 161 DLKPSNIFLVDTKQVKIGDFGL------VTSLKNDGKRTRSKGTLRYMSPEQISSQDYGK 214
Query: 335 KVDVFSFALILQEMIEGC 352
+VD+++ LIL E++ C
Sbjct: 215 EVDLYALGLILAELLHVC 232
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGD 233
+ A+K L + E+KV E ++ ++ HP V+ + Y G+
Sbjct: 37 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 96
Query: 234 LRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
L Y+++ G+ T + +I + YLH + IIHRDL+P NIL ++ H+++ D
Sbjct: 97 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITD 153
Query: 294 FGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCP 353
FG +K+L + K+ R T+ +Y +PE+ + D+++ I+ +++ G P
Sbjct: 154 FGTAKVL--SPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 210
Query: 354 PFPTKQE 360
PF E
Sbjct: 211 PFRAGNE 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 113/241 (46%), Gaps = 22/241 (9%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K + ++ E K + +E+A+L KI+HPN+V + ++ + + G+L
Sbjct: 46 VAIKCIAKKAL--EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 235 RAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILR---DDSGHLKV 291
+ +KG A + + + YLH+ I+HRDL+P N+L D+ + +
Sbjct: 104 FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
+DFGLSK+ + + C Y APEV + Y VD +S +I ++ G
Sbjct: 161 SDFGLSKMEDPGSVLS----TACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
Query: 352 CPPFPTKQE----KEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
PPF + + +++ KA + P + + +R L+E ++P +R T Q
Sbjct: 215 YPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLME----KDPEKRFTCEQA 270
Query: 408 L 408
L
Sbjct: 271 L 271
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 110/262 (41%), Gaps = 38/262 (14%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VAVK L E E + F E LL ++H ++V+F G T+ P+++V EY+ GDL
Sbjct: 51 VAVKALKE---ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 107
Query: 235 RAYLKQKG-----------------ALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLE 277
+L+ G L LAV A +A GM YL +HRDL
Sbjct: 108 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV--ASQVAAGMVYLAGLH---FVHRDLA 162
Query: 278 PSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVD 337
N L +K+ DFG+S+ + + + R+ PE ++ T+ D
Sbjct: 163 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM---LPIRWMPPESILYRKFTTESD 219
Query: 338 VFSFALILQEMIE-GCPPFPTKQEKEVPKAYIAN---ERPPFRAPTTHYAYGLRELIEDC 393
V+SF ++L E+ G P+ E ERP P + ++ C
Sbjct: 220 VWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVY------AIMRGC 273
Query: 394 WSEEPFRRPTFRQILMRLDDIS 415
W EP +R + + + RL ++
Sbjct: 274 WQREPQQRHSIKDVHARLQALA 295
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 133/293 (45%), Gaps = 27/293 (9%)
Query: 137 QNAREVPEYEIDPKELDFSNSVEITKGTF---RIASWRGTQVAVKTLGEEVFTDEDKVKA 193
Q + + E++I ++L+ I KG F W G +VA++ + E +ED++KA
Sbjct: 20 QTSIFLQEWDIPFEQLEIGEL--IGKGRFGQVYHGRWHG-EVAIRLIDIER-DNEDQLKA 75
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ-KGALKPTLAVKF 252
F E+ ++ RH NVV F+GA + I+T L + ++ K L +
Sbjct: 76 FKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQI 135
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPV 312
A +I +GM YLH + I+H+DL+ N+ D+ G + + DFGL + + + +
Sbjct: 136 AQEIVKGMGYLH---AKGILHKDLKSKNVFYDN-GKVVITDFGLFSISGVLQAGRREDKL 191
Query: 313 TCEETSWRYAAPEVYKNEEYDTK---------VDVFSFALILQEMIEGCPPFPTKQEKEV 363
+ + APE+ + DT+ DVF+ I E+ PF T+ + +
Sbjct: 192 RIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI 251
Query: 364 PKAYIANERPPFRAPTTHYAYG--LRELIEDCWSEEPFRRPTFRQILMRLDDI 414
+P + G + +++ CW+ E RPTF +++ L+ +
Sbjct: 252 IWQMGTGMKPNL----SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 24/281 (8%)
Query: 143 PEYEIDPKELDFSNSVEITKGTF-----RIASWRGTQVAVKTLGEEVFTDEDKVKAFIDE 197
PE D D + EI +G + + G +AVK + V E K + +D
Sbjct: 13 PEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQK-QLLMDL 71
Query: 198 LALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTL----AVKFA 253
+++ P +VQF GA+ + I E + + Y L + K
Sbjct: 72 DVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKIT 131
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVT 313
L + +N+L EN IIHRD++PSNIL D SG++K+ DFG+S + +++ + R
Sbjct: 132 LATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISG--QLVDSIAKTRDAG 187
Query: 314 CEETSWRYAAPE----VYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIA 369
C Y APE + YD + DV+S + L E+ G P+P +
Sbjct: 188 CRP----YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV 243
Query: 370 NERPPFRAPTT--HYAYGLRELIEDCWSEEPFRRPTFRQIL 408
PP + + ++ + C +++ +RP ++++L
Sbjct: 244 KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 125/266 (46%), Gaps = 37/266 (13%)
Query: 159 EITKGTFRIAS-WRGTQ----VAVKTL--GEEVFTDEDKVKAFIDELALLQKIRHPNVVQ 211
+I G F +A R Q VAVK + GE++ DE+ + I+ +L RHPN+V+
Sbjct: 25 DIGSGNFGVARLMRDKQSNELVAVKYIERGEKI--DENVKREIINHRSL----RHPNIVR 78
Query: 212 FLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAI 271
F + T + IV EY G+L + G A F + G++Y H + +
Sbjct: 79 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ---V 135
Query: 272 IHRDLEPSNILRDDS--GHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN 329
HRDL+ N L D S LK+ DFG SK ++V +P + T Y APEV
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKSTVGTP-AYIAPEVLLK 189
Query: 330 EEYDTKV-DVFSFALILQEMIEGCPPFPTKQEKEVPKAY------IANERPPFRAP-TTH 381
+EYD KV DV+S + L M+ G PF ++ E PK + I N + + P H
Sbjct: 190 KEYDGKVADVWSCGVTLYVMLVGAYPF---EDPEEPKNFRKTIHRILNVQ--YAIPDYVH 244
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQI 407
+ R LI + +P +R + +I
Sbjct: 245 ISPECRHLISRIFVADPAKRISIPEI 270
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 27/174 (15%)
Query: 197 ELALLQKIRHPNVVQFLG----------------AVTQSTPMMIVTEYLPKGDLRAYL-K 239
E+ L K+ H N+V + G + +++ + I E+ KG L ++ K
Sbjct: 54 EVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 113
Query: 240 QKG-ALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSK 298
++G L LA++ I +G++Y+H + +I+RDL+PSNI D+ +K+ DFGL
Sbjct: 114 RRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGL-- 168
Query: 299 LLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGC 352
++K D + + RY +PE +++Y +VD+++ LIL E++ C
Sbjct: 169 ----VTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVC 218
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 125/266 (46%), Gaps = 37/266 (13%)
Query: 159 EITKGTFRIAS-WRGTQ----VAVKTL--GEEVFTDEDKVKAFIDELALLQKIRHPNVVQ 211
+I G F +A R Q VAVK + GE++ DE+ + I+ +L RHPN+V+
Sbjct: 26 DIGAGNFGVARLMRDKQANELVAVKYIERGEKI--DENVKREIINHRSL----RHPNIVR 79
Query: 212 FLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAI 271
F + T + IV EY G+L + G A F + G++Y H + +
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ---V 136
Query: 272 IHRDLEPSNILRDDS--GHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN 329
HRDL+ N L D S LK+ADFG SK +V +P + T Y APEV
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYSKA-----SVLHSQPKSAVGTP-AYIAPEVLLK 190
Query: 330 EEYDTKV-DVFSFALILQEMIEGCPPFPTKQEKEVPKAY------IANERPPFRAPT-TH 381
+EYD KV DV+S + L M+ G PF ++ E PK + I N + + P H
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPF---EDPEEPKNFRKTIHRILNVQ--YAIPDYVH 245
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQI 407
+ R LI + +P +R + +I
Sbjct: 246 ISPECRHLISRIFVADPAKRISIPEI 271
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 160 ITKGTFRIASW-----RGTQVAVKTLGEEVFTDEDKVKA--FIDELALLQKIRHPNVVQF 212
I KG F + G Q AVK + FT + E ++ ++HP++V+
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 213 LGAVTQSTPMMIVTEYLPKGDLRAYLKQKG----ALKPTLAVKFALDIARGMNYLHENRP 268
L + + +V E++ DL + ++ +A + I + Y H+N
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN- 150
Query: 269 EAIIHRDLEPSNIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
IIHRD++P N+L +++S +K+ DFG++ L + V R T + APE
Sbjct: 151 --IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTP-----HFMAPE 203
Query: 326 VYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEK 361
V K E Y VDV+ +IL ++ GC PF +E+
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER 239
>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265.
pdb|4HQD|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265
Length = 169
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 60/97 (61%)
Query: 36 DPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGAD 95
D R L Y A EG + +K L+ G DVN +D D RT LH AA +G ++V+LL+S+GAD
Sbjct: 36 DGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGAD 95
Query: 96 VDPEDRWGSTPLADAVYYKHHDVIKLLEEHGAKPSTA 132
V+ +D G TPL A H +++KLL GA +T+
Sbjct: 96 VNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNTS 132
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 58/88 (65%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
RL+ A G+ D +K+L+++G DVN D D RT LH AA +G ++V+LL+S+GADV+ +
Sbjct: 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAK 66
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGA 127
D G TPL A H +++KLL GA
Sbjct: 67 DSDGRTPLHYAAKEGHKEIVKLLISKGA 94
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 58/92 (63%)
Query: 36 DPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGAD 95
D R L Y A EG + +K L+ G DVN +D D RT LH AA +G ++V+LL+S+GAD
Sbjct: 69 DGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGAD 128
Query: 96 VDPEDRWGSTPLADAVYYKHHDVIKLLEEHGA 127
V+ D G TPL A + + +++KLLE+ G
Sbjct: 129 VNTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 42/261 (16%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS--TPMMIVTEYL 229
G VAVK L E + E+ +L+ + H ++V++ G + +V EY+
Sbjct: 38 GEMVAVKALKEGC--GPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 95
Query: 230 PKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHL 289
P G LR YL + L + FA I GM YLH + IHR L N+L D+ +
Sbjct: 96 PLGSLRDYLPRHCVGLAQLLL-FAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLV 151
Query: 290 KVADFGLSKLLKFANT---VKE--DRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALI 344
K+ DFGL+K + + V+E D PV + APE K ++ DV+SF +
Sbjct: 152 KIGDFGLAKAVPEGHEYYRVREDGDSPVF-------WYAPECLKECKFYYASDVWSFGVT 204
Query: 345 LQEMIEGC----PPFP--------TKQEKEVPKAYIANERP-----PFRAPTTHYAYGLR 387
L E++ C P T+ + V + ER P R P Y
Sbjct: 205 LYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIY----- 259
Query: 388 ELIEDCWSEEPFRRPTFRQIL 408
L+++CW E RPTF+ ++
Sbjct: 260 HLMKNCWETEASFRPTFQNLV 280
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 42/261 (16%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQS--TPMMIVTEYL 229
G VAVK L E + E+ +L+ + H ++V++ G + +V EY+
Sbjct: 37 GEMVAVKALKEGC--GPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 94
Query: 230 PKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHL 289
P G LR YL + L + FA I GM YLH + IHR L N+L D+ +
Sbjct: 95 PLGSLRDYLPRHCVGLAQLLL-FAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLV 150
Query: 290 KVADFGLSKLLKFANT---VKE--DRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALI 344
K+ DFGL+K + + V+E D PV + APE K ++ DV+SF +
Sbjct: 151 KIGDFGLAKAVPEGHEYYRVREDGDSPVF-------WYAPECLKECKFYYASDVWSFGVT 203
Query: 345 LQEMIEGC----PPFP--------TKQEKEVPKAYIANERP-----PFRAPTTHYAYGLR 387
L E++ C P T+ + V + ER P R P Y
Sbjct: 204 LYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIY----- 258
Query: 388 ELIEDCWSEEPFRRPTFRQIL 408
L+++CW E RPTF+ ++
Sbjct: 259 HLMKNCWETEASFRPTFQNLV 279
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 116/245 (47%), Gaps = 25/245 (10%)
Query: 126 GAKPSTAPMHVQNAREVPEYEIDPKELDFSNSVEITKGTFRIAS-----WRGTQVAVKTL 180
G P P V+ + P +++ P+ ++ I +G + + S R T+VA+K +
Sbjct: 22 GVGPG-VPGEVEMVKGQP-FDVGPR---YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKI 76
Query: 181 GEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMI----VTEYLPKGDLRA 236
F + + + E+ +L + RH NV+ + ST + + + L + DL
Sbjct: 77 SP--FEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYK 134
Query: 237 YLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGL 296
LK + L F I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL
Sbjct: 135 LLKSQ-QLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGL 190
Query: 297 SKLLKFANTVKEDRPVTCEETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPP 354
+++ A+ + E + R Y APE+ N + Y +D++S IL EM+ P
Sbjct: 191 ARI---ADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
Query: 355 FPTKQ 359
FP K
Sbjct: 248 FPGKH 252
>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or264.
pdb|4GPM|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or264
Length = 169
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 80/150 (53%), Gaps = 10/150 (6%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
RL+ A G+ D +K+L+++G DVN D D RT LH AA G +VV+LL+S+GADV+ +
Sbjct: 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAK 66
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGAKPST------APMH--VQNA-REVPEYEIDPK 150
D G TPL A H +V+KLL GA + P+H +N +EV + I K
Sbjct: 67 DSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLI-SK 125
Query: 151 ELDFSNSVEITKGTFRIASWRGTQVAVKTL 180
D + S + +A G + VK L
Sbjct: 126 GADVNTSDSDGRTPLDLAREHGNEEVVKLL 155
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 58/97 (59%)
Query: 36 DPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGAD 95
D R L + A G + +K L+ G DVN +D D RT LH AA G +VV+LL+S+GAD
Sbjct: 36 DGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD 95
Query: 96 VDPEDRWGSTPLADAVYYKHHDVIKLLEEHGAKPSTA 132
V+ +D G TPL A H +V+KLL GA +T+
Sbjct: 96 VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTS 132
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 56/92 (60%)
Query: 36 DPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGAD 95
D R L + A G + +K L+ G DVN +D D RT LH AA G +VV+LL+S+GAD
Sbjct: 69 DGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD 128
Query: 96 VDPEDRWGSTPLADAVYYKHHDVIKLLEEHGA 127
V+ D G TPL A + + +V+KLLE+ G
Sbjct: 129 VNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 108/255 (42%), Gaps = 39/255 (15%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VAVK L + K F E LL ++H ++V+F G P+++V EY+ GDL
Sbjct: 48 VAVKALKDPTLAAR---KDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDL 104
Query: 235 RAYLK----------------QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEP 278
+L+ KG L + + A IA GM YL + +HRDL
Sbjct: 105 NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLAT 161
Query: 279 SNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW--RYAAPEVYKNEEYDTKV 336
N L + +K+ DFG+S+ + D T R+ PE ++ T+
Sbjct: 162 RNCLVGANLLVKIGDFGMSR-----DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 216
Query: 337 DVFSFALILQEMIE-GCPPFPTKQEKEVPKAYIAN---ERPPFRAPTTHYAYGLRELIED 392
DV+SF +IL E+ G P+ EV + ERP P Y +++
Sbjct: 217 DVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRV-CPKEVY-----DVMLG 270
Query: 393 CWSEEPFRRPTFRQI 407
CW EP +R ++I
Sbjct: 271 CWQREPQQRLNIKEI 285
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 111/234 (47%), Gaps = 33/234 (14%)
Query: 146 EIDPKELDFSNS-------VEITKGTFRIASWRG------TQVAVKTLGEEVFTDEDKVK 192
E++ K + SN +EI +G+F+ ++G +VA L + T ++ +
Sbjct: 13 ELETKAVGXSNDGRFLKFDIEIGRGSFKTV-YKGLDTETTVEVAWCELQDRKLTKSER-Q 70
Query: 193 AFIDELALLQKIRHPNVVQFL----GAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTL 248
F +E L+ ++HPN+V+F V +++VTE G L+ YLK+ K +
Sbjct: 71 RFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKV 130
Query: 249 AVKFALDIARGMNYLHENRPEAIIHRDLEPSNI-LRDDSGHLKVADFGLSKLLK--FANT 305
+ I +G+ +LH P IIHRDL+ NI + +G +K+ D GL+ L + FA
Sbjct: 131 LRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA 189
Query: 306 VKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQ 359
V + + APE Y+ E+YD VDV++F E P+ Q
Sbjct: 190 VI---------GTPEFXAPEXYE-EKYDESVDVYAFGXCXLEXATSEYPYSECQ 233
>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four
Identical Consensus Repeats
Length = 126
Score = 78.2 bits (191), Expect = 9e-15, Method: Composition-based stats.
Identities = 46/105 (43%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 38 RVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVD 97
R L A G L+ +K LL++G DVN +D + RT LH+AA G +VV+LLL GADV+
Sbjct: 3 RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 62
Query: 98 PEDRWGSTPLADAVYYKHHDVIKLLEEHGA------KPSTAPMHV 136
+D+ G TPL A H +V+KLL E GA K P+H+
Sbjct: 63 AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHL 107
Score = 77.0 bits (188), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/90 (47%), Positives = 57/90 (63%)
Query: 38 RVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVD 97
R L A G L+ +K LL++G DVN +D + RT LH+AA G +VV+LLL GADV+
Sbjct: 36 RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 95
Query: 98 PEDRWGSTPLADAVYYKHHDVIKLLEEHGA 127
+D+ G TPL A H +V+KLL E GA
Sbjct: 96 AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 17/185 (9%)
Query: 196 DELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALD 255
+E+A+L+KI+H N+V +T +V + + G+L + ++G A
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ 114
Query: 256 IARGMNYLHENRPEAIIHRDLEPSNILR---DDSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + YLHEN I+HRDL+P N+L +++ + + DFGLSK+ +++ +
Sbjct: 115 VLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM-------EQNGIM 164
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQE----KEVPKAYI 368
+ + Y APEV + Y VD +S +I ++ G PPF + E +++ + Y
Sbjct: 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY 224
Query: 369 ANERP 373
E P
Sbjct: 225 EFESP 229
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L++I+HPNV+ T ++++ E + G+L +L +K +L A +F I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+ YLH + I H DL+P NI+ D +K+ DFGL+ + F N K
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ APE+ E + D++S +I ++ G PF TKQE
Sbjct: 181 PA------FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 25/260 (9%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFID-ELALLQKIRHPNVVQFLGAVT 217
+I G F +A + + + + + +K+ A + E+ + +RHPN+V+F +
Sbjct: 26 DIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVIL 85
Query: 218 QSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLE 277
T + IV EY G+L + G A F + G++Y H + + HRDL+
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ---VCHRDLK 142
Query: 278 PSNILRDDS--GHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK 335
N L D S LK+ DFG SK ++V +P + T Y APEV +EYD K
Sbjct: 143 LENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKSTVGTP-AYIAPEVLLKKEYDGK 196
Query: 336 V-DVFSFALILQEMIEGCPPFPTKQEKEVPKAY------IANERPPFRAPT-THYAYGLR 387
V DV+S + L M+ G PF ++ E PK + I N + + P H + R
Sbjct: 197 VADVWSCGVTLYVMLVGAYPF---EDPEEPKNFRKTIHRILNVQ--YAIPDYVHISPECR 251
Query: 388 ELIEDCWSEEPFRRPTFRQI 407
LI + +P +R + +I
Sbjct: 252 HLISRIFVADPAKRISIPEI 271
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 117/274 (42%), Gaps = 52/274 (18%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQK--IRHPNVVQFLGA---VTQSTPM--MIVTE 227
VAVK VF+ ++ + FI+E + + + H N+ +F+ VT M ++V E
Sbjct: 39 VAVK-----VFSFANR-QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVME 92
Query: 228 YLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPE------AIIHRDLEPSNI 281
Y P G L YL + + + A + RG+ YLH P AI HRDL N+
Sbjct: 93 YYPNGSLXKYLSLHTS-DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNV 151
Query: 282 LRDDSGHLKVADFGLSKLLKFANTVK---EDRPVTCEETSWRYAAPEVYKN-------EE 331
L + G ++DFGLS L V+ ED E + RY APEV + E
Sbjct: 152 LVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXES 211
Query: 332 YDTKVDVFSFALILQEMIEGCPP-FPTKQEKEVPKAY---IAN---------------ER 372
+VD+++ LI E+ C FP + E A+ + N +R
Sbjct: 212 ALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQR 271
Query: 373 PPFRAPTTHYAYGLREL---IEDCWSEEPFRRPT 403
P F + +R L IEDCW ++ R T
Sbjct: 272 PKFPEAWKENSLAVRSLKETIEDCWDQDAEARLT 305
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L++I+HPNV+ T ++++ E + G+L +L +K +L A +F I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+ YLH + I H DL+P NI+ D +K+ DFGL+ + F N K
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ APE+ E + D++S +I ++ G PF TKQE
Sbjct: 181 P------EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 23/268 (8%)
Query: 148 DPKELDFSNSVEITKGTFRIASW-----RGTQVAVKTLGEEVFTDEDKVKAFIDELALLQ 202
DP+ L + V+I +G+ I G QVAVK + + + + +E+ +++
Sbjct: 42 DPRLL-LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMD---LRKQQRRELLFNEVVIMR 97
Query: 203 KIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNY 262
+H NVV+ + + ++ E+L G L + Q + +A + + + Y
Sbjct: 98 DYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIAT-VCEAVLQALAY 156
Query: 263 LHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRY- 321
LH + +IHRD++ +IL G +K++DFG F + +D P Y
Sbjct: 157 LH---AQGVIHRDIKSDSILLTLDGRVKLSDFG------FCAQISKDVPKRKXLVGTPYW 207
Query: 322 AAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFRAPTTH 381
APEV Y T+VD++S +++ EM++G PP+ + + K + PP + +H
Sbjct: 208 MAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL--RDSPPPKLKNSH 265
Query: 382 -YAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ LR+ +E +P R T +++L
Sbjct: 266 KVSPVLRDFLERMLVRDPQERATAQELL 293
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L++I+HPNV+ T ++++ E + G+L +L +K +L A +F I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+ YLH + I H DL+P NI+ D +K+ DFGL+ + F N K
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ APE+ E + D++S +I ++ G PF TKQE
Sbjct: 181 P------EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L++I+HPNV+ T ++++ E + G+L +L +K +L A +F I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+ YLH + I H DL+P NI+ D +K+ DFGL+ + F N K
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ APE+ E + D++S +I ++ G PF TKQE
Sbjct: 181 P------EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L++I+HPNV+ T ++++ E + G+L +L +K +L A +F I
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+ YLH + I H DL+P NI+ D +K+ DFGL+ + F N K
Sbjct: 123 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 179
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ APE+ E + D++S +I ++ G PF TKQE
Sbjct: 180 P------EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 223
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L++I+HPNV+ T ++++ E + G+L +L +K +L A +F I
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+ YLH + I H DL+P NI+ D +K+ DFGL+ + F N K
Sbjct: 123 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 179
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ APE+ E + D++S +I ++ G PF TKQE
Sbjct: 180 P------EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 223
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L++I+HPNV+ T ++++ E + G+L +L +K +L A +F I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+ YLH + I H DL+P NI+ D +K+ DFGL+ + F N K
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ APE+ E + D++S +I ++ G PF TKQE
Sbjct: 181 P------EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L++I+HPNV+ T ++++ E + G+L +L +K +L A +F I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+ YLH + I H DL+P NI+ D +K+ DFGL+ + F N K
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ APE+ E + D++S +I ++ G PF TKQE
Sbjct: 181 P------EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L++I+HPNV+ T ++++ E + G+L +L +K +L A +F I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+ YLH + I H DL+P NI+ D +K+ DFGL+ + F N K
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ APE+ E + D++S +I ++ G PF TKQE
Sbjct: 181 P------EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L++I+HPNV+ T ++++ E + G+L +L +K +L A +F I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+ YLH + I H DL+P NI+ D +K+ DFGL+ + F N K
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ APE+ E + D++S +I ++ G PF TKQE
Sbjct: 181 P------EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L+++ HPN++ T ++++ E + G+L +L QK +L A F I
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+NYLH + I H DL+P NI+ D H+K+ DFGL A+ +++
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL------AHEIEDGVEF 175
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ + APE+ E + D++S +I ++ G PF TKQE
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L++I+HPNV+ T ++++ E + G+L +L +K +L A +F I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+ YLH + I H DL+P NI+ D +K+ DFGL+ + F N K
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ APE+ E + D++S +I ++ G PF TKQE
Sbjct: 181 P------EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 122/267 (45%), Gaps = 43/267 (16%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTP------MMI 224
G A+K + +V DE++ E+ +L+K H N+ + GA + P + +
Sbjct: 49 GQLAAIKVM--DVTGDEEE--EIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 104
Query: 225 VTEYLPKGDLRAYLKQ-KG-ALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
V E+ G + +K KG LK +I RG+++LH+++ +IHRD++ N+L
Sbjct: 105 VMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVL 161
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEET---SWRYAAPEVYKNEE-----YDT 334
++ +K+ DFG+S L DR V T + + APEV +E YD
Sbjct: 162 LTENAEVKLVDFGVSAQL--------DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDF 213
Query: 335 KVDVFSFALILQEMIEGCPPF----PTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELI 390
K D++S + EM EG PP P + +P+ P R + ++ + I
Sbjct: 214 KSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR------NPAPRLKSKKWSKKFQSFI 267
Query: 391 EDCWSEEPFRRPTFRQILMRLDDISDQ 417
E C + +RP Q LM+ I DQ
Sbjct: 268 ESCLVKNHSQRPATEQ-LMKHPFIRDQ 293
>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three
Identical Consensus Repeats
pdb|1N0Q|B Chain B, 3ank: A Designed Ankyrin Repeat Protein With Three
Identical Consensus Repeats
Length = 93
Score = 77.0 bits (188), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/90 (47%), Positives = 57/90 (63%)
Query: 38 RVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVD 97
R L A G L+ +K LL++G DVN +D + RT LH+AA G +VV+LLL GADV+
Sbjct: 3 RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 62
Query: 98 PEDRWGSTPLADAVYYKHHDVIKLLEEHGA 127
+D+ G TPL A H +V+KLL E GA
Sbjct: 63 AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L++I+HPNV+ T ++++ E + G+L +L +K +L A +F I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+ YLH + I H DL+P NI+ D +K+ DFGL+ + F N K
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ APE+ E + D++S +I ++ G PF TKQE
Sbjct: 181 P------EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L++I+HPNV+ T ++++ E + G+L +L +K +L A +F I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+ YLH + I H DL+P NI+ D +K+ DFGL+ + F N K
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ APE+ E + D++S +I ++ G PF TKQE
Sbjct: 181 P------EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 124/285 (43%), Gaps = 34/285 (11%)
Query: 147 IDPKELDFSNSV-EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIR 205
ID K+L+F + E G W+G + VK L ++ K + F +E L+
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTR-KSRDFNEECPRLRIFS 65
Query: 206 HPNVVQFLGAVTQSTPM---MIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGM 260
HPNV+ LGA QS P ++T + P G L L + + + AVKFALD ARG
Sbjct: 66 HPNVLPVLGAC-QSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGX 124
Query: 261 NYLHENRP----EAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE 316
+LH P A+ R + I D + + AD S F + + P
Sbjct: 125 AFLHTLEPLIPRHALNSRSVX---IDEDXTARISXADVKFS----FQSPGRXYAPA---- 173
Query: 317 TSWRYAAPEVYKNEEYDTK---VDVFSFALILQEMIEGCPPFPTKQEKEV-PKAYIANER 372
+ APE + + DT D +SFA++L E++ PF E+ K + R
Sbjct: 174 ----WVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLR 229
Query: 373 PPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQ 417
P + + L ++ C +E+P +RP F I+ L+ D+
Sbjct: 230 PTIPPGISPHVSKLXKI---CXNEDPAKRPKFDXIVPILEKXQDK 271
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L++I+HPNV+ T ++++ E + G+L +L +K +L A +F I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+ YLH + I H DL+P NI+ D +K+ DFGL+ + F N K
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ APE+ E + D++S +I ++ G PF TKQE
Sbjct: 181 P------EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267.
pdb|4HB5|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267
Length = 169
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 6/102 (5%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
RL+ A G+ D +K+LL++G D N D D RT LH AA G ++V+LLLS+GAD + +
Sbjct: 7 RLIEAAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAK 66
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGAKPST------APMH 135
D G TPL A H +++KLL GA P+ P+H
Sbjct: 67 DSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLH 108
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 57/97 (58%)
Query: 36 DPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGAD 95
D R L Y A G + +K LL G D N +D D RT LH AA G ++V+LLLS+GAD
Sbjct: 36 DGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGAD 95
Query: 96 VDPEDRWGSTPLADAVYYKHHDVIKLLEEHGAKPSTA 132
+ +D G TPL A H +++KLL GA P+T+
Sbjct: 96 PNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNTS 132
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%)
Query: 36 DPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGAD 95
D R L Y A G + +K LL G D N +D D RT LH AA G ++V+LLLS+GAD
Sbjct: 69 DGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGAD 128
Query: 96 VDPEDRWGSTPLADAVYYKHHDVIKLLEEHGA 127
+ D G TPL A + + +++KLLE+ G
Sbjct: 129 PNTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ +L++IRHPN++ T ++++ E + G+L +L +K +L A +F I
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 117
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G++YLH R I H DL+P NI+ D +K+ DFG++ ++ N K
Sbjct: 118 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT 174
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ APE+ E + D++S +I ++ G PF TKQE
Sbjct: 175 P------EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 218
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ +L++IRHPN++ T ++++ E + G+L +L +K +L A +F I
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 138
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G++YLH R I H DL+P NI+ D +K+ DFG++ ++ N K
Sbjct: 139 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT 195
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ APE+ E + D++S +I ++ G PF TKQE
Sbjct: 196 P------EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 239
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 79
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 136
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 137 LDERDNLKISDFGLATVFRYNN---RERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 200 LLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARG 259
LL+ +HPN++ + +VTE + G+L + ++ A I +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKT 128
Query: 260 MNYLHENRPEAIIHRDLEPSNILR-DDSGH---LKVADFGLSKLLKFANTVKEDRPVTCE 315
+ YLH + ++HRDL+PSNIL D+SG+ +++ DFG +K L+ N + T
Sbjct: 129 VEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN 185
Query: 316 ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF 355
+ APEV + + YD D++S ++L M+ G PF
Sbjct: 186 -----FVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 79
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 136
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 137 LDERDNLKISDFGLATVFRYNN---RERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+ +L++IRHPN++ T ++++ E + G+L +L +K +L A +F I
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 124
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G++YLH R I H DL+P NI+ D +K+ DFG++ ++ N K
Sbjct: 125 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT 181
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ APE+ E + D++S +I ++ G PF TKQE
Sbjct: 182 P------EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 225
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 79
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 136
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 137 LDERDNLKISDFGLATVFRYNN---RERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 15/216 (6%)
Query: 200 LLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARG 259
LL+ +HPN++ + +VTE + G+L + ++ A I +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKT 133
Query: 260 MNYLHENRPEAIIHRDLEPSNILR-DDSGH---LKVADFGLSKLLKFANTVKEDRPVTCE 315
+ YLH + ++HRDL+PSNIL D+SG+ L++ DFG +K L+ N + T
Sbjct: 134 VEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA- 189
Query: 316 ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF---PTKQEKEVPKAYIANER 372
+ APEV K + YD D++S ++L M+ G PF P+ +E+ + +
Sbjct: 190 ----NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKF 245
Query: 373 PPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ ++L+ +P +R T +Q+L
Sbjct: 246 TLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVL 281
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 37/266 (13%)
Query: 159 EITKGTFRIAS-WRGTQ----VAVKTL--GEEVFTDEDKVKAFIDELALLQKIRHPNVVQ 211
+I G F +A R Q VAVK + GE++ DE+ + I+ +L RHPN+V+
Sbjct: 26 DIGSGNFGVARLMRDKQSNELVAVKYIERGEKI--DENVKREIINHRSL----RHPNIVR 79
Query: 212 FLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAI 271
F + T + IV EY G+L + G A F + G++Y H + +
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ---V 136
Query: 272 IHRDLEPSNILRDDS--GHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN 329
HRDL+ N L D S LK+ FG SK ++V +P + T Y APEV
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSK-----SSVLHSQPKSTVGTP-AYIAPEVLLK 190
Query: 330 EEYDTKV-DVFSFALILQEMIEGCPPFPTKQEKEVPKAY------IANERPPFRAPT-TH 381
+EYD KV DV+S + L M+ G PF ++ E PK + I N + + P H
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPF---EDPEEPKNFRKTIHRILNVQ--YAIPDYVH 245
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQI 407
+ R LI + +P +R + +I
Sbjct: 246 ISPECRHLISRIFVADPAKRISIPEI 271
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 79
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 136
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 137 LDERDNLKISDFGLATVFRYNN---RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 21 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 80
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 137
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 138 LDERDNLKISDFGLATVFRYNN---RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 35/224 (15%)
Query: 150 KELDFSNSVEITKGTFRIASW----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQKI 204
+E+ ++N I G+F + +VA+K L ++ F + EL +++ +
Sbjct: 38 REIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR--------ELQIMRIV 89
Query: 205 RHPNVVQFL------GAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-FAL 254
+HPNVV G + +V EY+P+ RA Y K K + P L +K +
Sbjct: 90 KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTM-PMLLIKLYMY 148
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDD-SGHLKVADFGLSKLLKFANTVKEDRPVT 313
+ R + Y+H I HRD++P N+L D SG LK+ DFG +K+L P
Sbjct: 149 QLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI------AGEPNV 199
Query: 314 CEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ Y T +D++S ++ E+++G P FP
Sbjct: 200 SXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFP 243
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQ 79
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 136
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 137 LDERDNLKISDFGLATVFRYNN---RERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 21 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQ 80
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 137
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 138 LDERDNLKISDFGLATVFRYNN---RERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 7/198 (3%)
Query: 159 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ 218
E G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 16 EGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 219 STPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEP 278
+ EY G+L ++ + A +F + G+ YLH I HRD++P
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKP 132
Query: 279 SNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VD 337
N+L D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VD
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNN---RERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 338 VFSFALILQEMIEGCPPF 355
V+S ++L M+ G P+
Sbjct: 190 VWSCGIVLTAMLAGELPW 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 21 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 80
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 137
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 138 LDERDNLKISDFGLATVFRYNN---RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 21 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 80
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 137
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 138 LDERDNLKISDFGLATVFRYNN---RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 21 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 80
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 137
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 138 LDERDNLKISDFGLATVFRYNN---RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 84/188 (44%), Gaps = 18/188 (9%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G Q AVK + EVF ++EL + P +V GAV + + I E L
Sbjct: 83 GFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG 134
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNI-LRDDSGHLK 290
G L +KQ G L A+ + G+ YLH R I+H D++ N+ L D
Sbjct: 135 GSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAA 191
Query: 291 VADFGLSKLLK---FANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQE 347
+ DFG + L+ ++ + ET + APEV + D KVD++S ++
Sbjct: 192 LCDFGHALCLQPDGLGKSLLTGDYIPGTET---HMAPEVVMGKPCDAKVDIWSSCCMMLH 248
Query: 348 MIEGCPPF 355
M+ GC P+
Sbjct: 249 MLNGCHPW 256
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 79/171 (46%), Gaps = 22/171 (12%)
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-----QKGALKPTL 248
F +E ++ P VVQ A + +V EY+P GDL + +K A T
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA 180
Query: 249 AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKE 308
V ALD M + IHRD++P N+L D SGHLK+ADFG + V+
Sbjct: 181 EVVLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 231
Query: 309 DRPVTCEETSWRYAAPEVYKNE----EYDTKVDVFSFALILQEMIEGCPPF 355
D V + Y +PEV K++ Y + D +S + L EM+ G PF
Sbjct: 232 DTAVGTPD----YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 15/216 (6%)
Query: 200 LLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARG 259
LL+ +HPN++ + +VTE + G+L + ++ A I +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKT 133
Query: 260 MNYLHENRPEAIIHRDLEPSNILR-DDSGH---LKVADFGLSKLLKFANTVKEDRPVTCE 315
+ YLH + ++HRDL+PSNIL D+SG+ L++ DFG +K L+ N + T
Sbjct: 134 VEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN 190
Query: 316 ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF---PTKQEKEVPKAYIANER 372
+ APEV K + YD D++S ++L M+ G PF P+ +E+ + +
Sbjct: 191 -----FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKF 245
Query: 373 PPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ ++L+ +P +R T +Q+L
Sbjct: 246 TLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVL 281
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 79/171 (46%), Gaps = 22/171 (12%)
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-----QKGALKPTL 248
F +E ++ P VVQ A + +V EY+P GDL + +K A T
Sbjct: 116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA 175
Query: 249 AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKE 308
V ALD M + IHRD++P N+L D SGHLK+ADFG + V+
Sbjct: 176 EVVLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 226
Query: 309 DRPVTCEETSWRYAAPEVYKNE----EYDTKVDVFSFALILQEMIEGCPPF 355
D V + Y +PEV K++ Y + D +S + L EM+ G PF
Sbjct: 227 DTAVGTPD----YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 159 EITKGTFRIASWR------GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQF 212
++ KG + I W+ G VAVK + + D + F + + L + H N+V
Sbjct: 16 KLGKGAYGIV-WKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 213 LGAVTQSTP--MMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEA 270
L + + +V +Y+ + DL A ++ L+P + + + YLH
Sbjct: 75 LNVLRADNDRDVYLVFDYM-ETDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSG---G 129
Query: 271 IIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEE-------------- 316
++HRD++PSNIL + H+KVADFGLS+ V + P++ E
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 317 ---TSWRYAAPEV-YKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
T W Y APE+ + +Y +D++S IL E++ G P FP
Sbjct: 190 YVATRW-YRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 79/171 (46%), Gaps = 22/171 (12%)
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-----QKGALKPTL 248
F +E ++ P VVQ A + +V EY+P GDL + +K A T
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA 180
Query: 249 AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKE 308
V ALD M + IHRD++P N+L D SGHLK+ADFG + V+
Sbjct: 181 EVVLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 231
Query: 309 DRPVTCEETSWRYAAPEVYKNE----EYDTKVDVFSFALILQEMIEGCPPF 355
D V + Y +PEV K++ Y + D +S + L EM+ G PF
Sbjct: 232 DTAVGTPD----YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 19 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 78
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 79 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 135
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 136 LDERDNLKISDFGLATVFRYNN---RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 192
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 193 GIVLTAMLAGELPW 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 79
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 136
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 137 LDERDNLKISDFGLATVFRYNN---RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 21 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 80
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 137
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 138 LDERDNLKISDFGLATVFRYNN---RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 79
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 136
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 137 LDERDNLKISDFGLATVFRYNN---RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 16/171 (9%)
Query: 192 KAFIDELALLQKIR-HPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAV 250
+A + E+ +L+K+ HPN++Q +T +V + + KG+L YL +K L
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR 127
Query: 251 KFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDR 310
K + + LH+ I+HRDL+P NIL DD ++K+ DFG S L ++E
Sbjct: 128 KIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE-- 182
Query: 311 PVTCEETSWRYAAPEVYK------NEEYDTKVDVFSFALILQEMIEGCPPF 355
C S Y APE+ + + Y +VD++S +I+ ++ G PPF
Sbjct: 183 --VCGTPS--YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 84/188 (44%), Gaps = 18/188 (9%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G Q AVK + EVF ++EL + P +V GAV + + I E L
Sbjct: 97 GFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG 148
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNI-LRDDSGHLK 290
G L +KQ G L A+ + G+ YLH R I+H D++ N+ L D
Sbjct: 149 GSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAA 205
Query: 291 VADFGLSKLLK---FANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQE 347
+ DFG + L+ ++ + ET + APEV + D KVD++S ++
Sbjct: 206 LCDFGHALCLQPDGLGKSLLTGDYIPGTET---HMAPEVVMGKPCDAKVDIWSSCCMMLH 262
Query: 348 MIEGCPPF 355
M+ GC P+
Sbjct: 263 MLNGCHPW 270
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 79
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 136
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 137 LDERDNLKISDFGLATVFRYNN---RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 79
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 136
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 137 LDERDNLKISDFGLATVFRYNN---RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 79
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 136
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 137 LDERDNLKISDFGLATVFRYNN---RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 87/176 (49%), Gaps = 18/176 (10%)
Query: 187 DEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ-KGALK 245
DE + + E+ LL++++H N+V+ + + +V E+ + DL+ Y G L
Sbjct: 41 DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLD 99
Query: 246 PTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANT 305
P + F + +G+ + H ++HRDL+P N+L + +G LK+ADFGL++
Sbjct: 100 PEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLARAFGI--- 153
Query: 306 VKEDRPVTC---EETSWRYAAPEV-YKNEEYDTKVDVFSFALILQEMIEGCPP-FP 356
PV C E + Y P+V + + Y T +D++S I E+ P FP
Sbjct: 154 -----PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFP 204
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 16/171 (9%)
Query: 192 KAFIDELALLQKIR-HPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAV 250
+A + E+ +L+K+ HPN++Q +T +V + + KG+L YL +K L
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR 114
Query: 251 KFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDR 310
K + + LH+ I+HRDL+P NIL DD ++K+ DFG S L ++E
Sbjct: 115 KIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE-- 169
Query: 311 PVTCEETSWRYAAPEVYK------NEEYDTKVDVFSFALILQEMIEGCPPF 355
C S Y APE+ + + Y +VD++S +I+ ++ G PPF
Sbjct: 170 --VCGTPS--YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 21 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 80
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 137
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 138 LDERDNLKISDFGLATVFRYNN---RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 84/188 (44%), Gaps = 18/188 (9%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G Q AVK + EVF ++EL + P +V GAV + + I E L
Sbjct: 99 GFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG 150
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNI-LRDDSGHLK 290
G L +KQ G L A+ + G+ YLH R I+H D++ N+ L D
Sbjct: 151 GSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAA 207
Query: 291 VADFGLSKLLK---FANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQE 347
+ DFG + L+ ++ + ET + APEV + D KVD++S ++
Sbjct: 208 LCDFGHALCLQPDGLGKSLLTGDYIPGTET---HMAPEVVMGKPCDAKVDIWSSCCMMLH 264
Query: 348 MIEGCPPF 355
M+ GC P+
Sbjct: 265 MLNGCHPW 272
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 127/301 (42%), Gaps = 48/301 (15%)
Query: 160 ITKGTFR---IASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI--RHPNVVQFLG 214
I KG F WRG +VAVK +F+ ++ +++ E + Q + RH N++ F+
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVK-----IFSSREE-RSWFREAEIYQTVMLRHENILGFIA 70
Query: 215 AVTQS----TPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLH------ 264
A + T + +V++Y G L YL + + +K AL A G+ +LH
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-IKLALSTASGLAHLHMEIVGT 129
Query: 265 ENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAP 324
+ +P AI HRDL+ NIL +G +AD GL+ A + P T RY AP
Sbjct: 130 QGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK-RYMAP 187
Query: 325 EV------YKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERP----- 373
EV K+ E + D+++ L+ E+ C ++ ++P + P
Sbjct: 188 EVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 247
Query: 374 -------------PFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLSI 420
P R + + +++ +CW R T +I L +S Q I
Sbjct: 248 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 307
Query: 421 K 421
K
Sbjct: 308 K 308
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 123/266 (46%), Gaps = 37/266 (13%)
Query: 159 EITKGTFRIAS-WRGTQ----VAVKTL--GEEVFTDEDKVKAFIDELALLQKIRHPNVVQ 211
+I G F +A R Q VAVK + GE++ DE+ + I+ +L RHPN+V+
Sbjct: 26 DIGSGNFGVARLMRDKQSNELVAVKYIERGEKI--DENVKREIINHRSL----RHPNIVR 79
Query: 212 FLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAI 271
F + T + IV EY G+L + G A F + G++Y H + +
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ---V 136
Query: 272 IHRDLEPSNILRDDS--GHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN 329
HRDL+ N L D S LK+ FG SK ++V +P T Y APEV
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSK-----SSVLHSQPKDTVGTP-AYIAPEVLLK 190
Query: 330 EEYDTKV-DVFSFALILQEMIEGCPPFPTKQEKEVPKAY------IANERPPFRAPT-TH 381
+EYD KV DV+S + L M+ G PF ++ E PK + I N + + P H
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPF---EDPEEPKNFRKTIHRILNVQ--YAIPDYVH 245
Query: 382 YAYGLRELIEDCWSEEPFRRPTFRQI 407
+ R LI + +P +R + +I
Sbjct: 246 ISPECRHLISRIFVADPAKRISIPEI 271
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + + H NVV+F G +
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQ 79
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 136
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 137 LDERDNLKISDFGLATVFRYNN---RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 122/289 (42%), Gaps = 57/289 (19%)
Query: 170 WRGTQVAVKTLGEEVFTDEDKVKAFID-ELALLQKIRHPNVVQFLGA----VTQSTPMMI 224
W G VAVK +F+ D+ F + E+ +RH N++ F+ + ST + +
Sbjct: 29 WHGESVAVK-----IFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWL 83
Query: 225 VTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLH------ENRPEAIIHRDLEP 278
+T Y G L +L Q+ L+P LA++ A+ A G+ +LH + +P AI HRD +
Sbjct: 84 ITHYHEHGSLYDFL-QRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKP-AIAHRDFKS 141
Query: 279 SNILRDDSGHLKVADFGL-------SKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNE- 330
N+L + +AD GL S L N + RY APEV +
Sbjct: 142 RNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTK--------RYMAPEVLDEQI 193
Query: 331 -----EYDTKVDVFSFALILQE-----MIEGC-----PPF----PTKQEKEVPKAYIANE 371
E D+++F L+L E ++ G PPF P E K + +
Sbjct: 194 RTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFEDMKKVVCVD 253
Query: 372 RP----PFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISD 416
+ P R GL +++ +CW P R T +I L IS+
Sbjct: 254 QQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKISN 302
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 18/176 (10%)
Query: 187 DEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ-KGALK 245
DE + + E+ LL++++H N+V+ + + +V E+ + DL+ Y G L
Sbjct: 41 DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLD 99
Query: 246 PTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANT 305
P + F + +G+ + H ++HRDL+P N+L + +G LK+A+FGL++
Sbjct: 100 PEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGI--- 153
Query: 306 VKEDRPVTC---EETSWRYAAPEV-YKNEEYDTKVDVFSFALILQEMIE-GCPPFP 356
PV C E + Y P+V + + Y T +D++S I E+ G P FP
Sbjct: 154 -----PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 204
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 123/290 (42%), Gaps = 45/290 (15%)
Query: 168 ASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI--RHPNVVQFLGAVTQS----TP 221
WRG +VAVK +F+ ++ +++ E + Q + RH N++ F+ A + T
Sbjct: 25 GKWRGEEVAVK-----IFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 78
Query: 222 MMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLH------ENRPEAIIHRD 275
+ +V++Y G L YL + + +K AL A G+ +LH + +P AI HRD
Sbjct: 79 LWLVSDYHEHGSLFDYLNRYTVTVEGM-IKLALSTASGLAHLHMEIVGTQGKP-AIAHRD 136
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEV------YKN 329
L+ NIL +G +AD GL+ A + P T RY APEV K+
Sbjct: 137 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK-RYMAPEVLDDSINMKH 195
Query: 330 EEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERP---------------- 373
E + D+++ L+ E+ C ++ ++P + P
Sbjct: 196 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 255
Query: 374 --PFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLSIK 421
P R + + +++ +CW R T +I L +S Q IK
Sbjct: 256 NIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGIK 305
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 19/189 (10%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVTEY 228
+VAVK L F + EL LL+ ++H NV+ L T +T + + +
Sbjct: 55 KVAVKKLSRP-FQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 113
Query: 229 LPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
L DL +K + AL + RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 114 LMGADLNNIVKSQ-ALSDEHVQFLVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSE 169
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALILQE 347
L++ DFGL++ + D +T + Y APE+ N Y+ VD++S I+ E
Sbjct: 170 LRILDFGLAR--------QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
Query: 348 MIEGCPPFP 356
+++G FP
Sbjct: 222 LLQGKALFP 230
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 15/172 (8%)
Query: 195 IDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
I E++LL++++H N+++ + + + ++ EY + DL+ Y+ + + + F
Sbjct: 81 IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLY 139
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH-----LKVADFGLSKLLKFANTVKED 309
+ G+N+ H R +HRDL+P N+L S LK+ DFGL++ F +++
Sbjct: 140 QLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR--AFGIPIRQ- 193
Query: 310 RPVTCEETSWRYAAPEVY-KNEEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
T E + Y PE+ + Y T VD++S A I EM+ P FP E
Sbjct: 194 --FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE 243
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 123/290 (42%), Gaps = 45/290 (15%)
Query: 168 ASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI--RHPNVVQFLGAVTQS----TP 221
WRG +VAVK +F+ ++ +++ E + Q + RH N++ F+ A + T
Sbjct: 22 GKWRGEEVAVK-----IFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75
Query: 222 MMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLH------ENRPEAIIHRD 275
+ +V++Y G L YL + + +K AL A G+ +LH + +P AI HRD
Sbjct: 76 LWLVSDYHEHGSLFDYLNRYTVTVEGM-IKLALSTASGLAHLHMEIVGTQGKP-AIAHRD 133
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEV------YKN 329
L+ NIL +G +AD GL+ A + P T RY APEV K+
Sbjct: 134 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK-RYMAPEVLDDSINMKH 192
Query: 330 EEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERP---------------- 373
E + D+++ L+ E+ C ++ ++P + P
Sbjct: 193 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 252
Query: 374 --PFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLSIK 421
P R + + +++ +CW R T +I L +S Q IK
Sbjct: 253 NIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGIK 302
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 95/194 (48%), Gaps = 7/194 (3%)
Query: 163 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM 222
G ++A R T+ AV ++ D + E+ + + H NVV+F G +
Sbjct: 21 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQ 80
Query: 223 MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL 282
+ EY G+L ++ + A +F + G+ YLH I HRD++P N+L
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL 137
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTK-VDVFSF 341
D+ +LK++DFGL+ + ++ N +R + + Y APE+ K E+ + VDV+S
Sbjct: 138 LDERDNLKISDFGLATVFRYNN---RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 342 ALILQEMIEGCPPF 355
++L M+ G P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 14/155 (9%)
Query: 201 LQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLA------VKFAL 254
L RHP++V +G + M+++ +Y+ G+L+ +L G+ PT++ ++ +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY--GSDLPTMSMSWEQRLEICI 146
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
ARG++YLH AIIHRD++ NIL D++ K+ DFG+SK + +
Sbjct: 147 GAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKK---GTELDQTHLXXV 200
Query: 315 EETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMI 349
+ + Y PE + K DV+SF ++L E++
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 14/155 (9%)
Query: 201 LQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLA------VKFAL 254
L RHP++V +G + M+++ +Y+ G+L+ +L G+ PT++ ++ +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY--GSDLPTMSMSWEQRLEICI 146
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
ARG++YLH AIIHRD++ NIL D++ K+ DFG+SK + +
Sbjct: 147 GAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKK---GTELGQTHLXXV 200
Query: 315 EETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMI 349
+ + Y PE + K DV+SF ++L E++
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 123/290 (42%), Gaps = 45/290 (15%)
Query: 168 ASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI--RHPNVVQFLGAVTQS----TP 221
WRG +VAVK +F+ ++ +++ E + Q + RH N++ F+ A + T
Sbjct: 61 GKWRGEEVAVK-----IFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 114
Query: 222 MMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLH------ENRPEAIIHRD 275
+ +V++Y G L YL + + +K AL A G+ +LH + +P AI HRD
Sbjct: 115 LWLVSDYHEHGSLFDYLNRYTVTVEGM-IKLALSTASGLAHLHMEIVGTQGKP-AIAHRD 172
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEV------YKN 329
L+ NIL +G +AD GL+ A + P T RY APEV K+
Sbjct: 173 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK-RYMAPEVLDDSINMKH 231
Query: 330 EEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERP---------------- 373
E + D+++ L+ E+ C ++ ++P + P
Sbjct: 232 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 291
Query: 374 --PFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQLSIK 421
P R + + +++ +CW R T +I L +S Q IK
Sbjct: 292 NIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGIK 341
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L+++ H NV+ T ++++ E + G+L +L QK +L A F I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+NYLH + I H DL+P NI+ D H+K+ DFGL A+ +++
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL------AHEIEDGVEF 175
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ + APE+ E + D++S +I ++ G PF TKQE
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 92/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G ++AVK L F K EL LL+ ++H NV+ L T +T + + +
Sbjct: 76 GLKIAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLV 134
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 135 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 189
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 190 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNMTVDIWSVGCI 241
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 242 MAELLTGRTLFP 253
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 87/168 (51%), Gaps = 13/168 (7%)
Query: 250 VKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSK-LLKFANTVKE 308
+ ++ +ARGM +L + IHRDL NIL ++ +K+ DFGL++ + K + V++
Sbjct: 202 ISYSFQVARGMEFLSSRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK 258
Query: 309 DRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFPTKQEKEVPKAY 367
++ APE ++ Y TK DV+S+ ++L E+ G P+P Q E +
Sbjct: 259 GDT----RLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDE---DF 311
Query: 368 IANERPPFRAPTTHYAY-GLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
+ R R Y+ + +++ DCW +P RP F +++ +L D+
Sbjct: 312 CSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDL 359
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVT-QSTPMMIVTEYLPKG 232
VAVK L E E KA + EL +L I H NVV LGA T Q P+M++ EY G
Sbjct: 60 VAVKMLKEGATASE--YKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYG 117
Query: 233 DLRAYLKQK 241
+L YLK K
Sbjct: 118 NLSNYLKSK 126
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L+++ H NV+ T ++++ E + G+L +L QK +L A F I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+NYLH + I H DL+P NI+ D H+K+ DFGL A+ +++
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL------AHEIEDGVEF 175
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ + APE+ E + D++S +I ++ G PF TKQE
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L+++ H NV+ T ++++ E + G+L +L QK +L A F I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+NYLH + I H DL+P NI+ D H+K+ DFGL A+ +++
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL------AHEIEDGVEF 175
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ + APE+ E + D++S +I ++ G PF TKQE
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L+++ H NV+ T ++++ E + G+L +L QK +L A F I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+NYLH + I H DL+P NI+ D H+K+ DFGL A+ +++
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL------AHEIEDGVEF 175
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ + APE+ E + D++S +I ++ G PF TKQE
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 19/189 (10%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVTEY 228
+VAVK L F + EL LL+ ++H NV+ L T +T + + +
Sbjct: 55 KVAVKKLSRP-FQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 113
Query: 229 LPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
L DL +K + AL + RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 114 LMGADLNNIVKCQ-ALSDEHVQFLVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSE 169
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALILQE 347
L++ DFGL++ + D +T + Y APE+ N Y+ VD++S I+ E
Sbjct: 170 LRILDFGLAR--------QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
Query: 348 MIEGCPPFP 356
+++G FP
Sbjct: 222 LLQGKALFP 230
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI 256
E+++L+++ H NV+ T ++++ E + G+L +L QK +L A F I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 257 ARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLSKLLKFANTVKEDRPV 312
G+NYLH + I H DL+P NI+ D H+K+ DFGL A+ +++
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL------AHEIEDGVEF 175
Query: 313 TCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF--PTKQE 360
+ + APE+ E + D++S +I ++ G PF TKQE
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 39 FDVGPR---YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIK 93
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + +VT +L DL LK + L F
Sbjct: 94 ILLRFRHENIIGINDIIRAPTIEQMKDVYLVT-HLMGADLYKLLKTQ-HLSNDHICYFLY 151
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 152 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARV---ADPDHDHTGFLT 205
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Query: 192 KAFIDELALLQKIR-HPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAV 250
+A + E+ +L+K+ HPN++Q +T +V + + KG+L YL +K L
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR 127
Query: 251 KFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDR 310
K + + LH+ I+HRDL+P NIL DD ++K+ DFG S L ++
Sbjct: 128 KIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS-- 182
Query: 311 PVTCEETSWRYAAPEVYK------NEEYDTKVDVFSFALILQEMIEGCPPF 355
C S Y APE+ + + Y +VD++S +I+ ++ G PPF
Sbjct: 183 --VCGTPS--YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 160 ITKGTFRIASW-----RGTQVAVKTLGEEVFTDEDKVKA--FIDELALLQKIRHPNVVQF 212
I KG F + G Q AVK + FT + E ++ ++HP++V+
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 213 LGAVTQSTPMMIVTEYLPKGDLRAYLKQKG----ALKPTLAVKFALDIARGMNYLHENRP 268
L + + +V E++ DL + ++ +A + I + Y H+N
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN- 152
Query: 269 EAIIHRDLEPSNIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
IIHRD++P +L +++S +K+ FG++ L + V R T + APE
Sbjct: 153 --IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH-----FMAPE 205
Query: 326 VYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEK 361
V K E Y VDV+ +IL ++ GC PF +E+
Sbjct: 206 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER 241
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 19/189 (10%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVTEY 228
+VAVK L F + EL LL+ ++H NV+ L T +T + + +
Sbjct: 47 KVAVKKLSRP-FQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 105
Query: 229 LPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
L DL +K + AL + RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 LMGADLNNIVKCQ-ALSDEHVQFLVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCE 161
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALILQE 347
L++ DFGL++ + D +T + Y APE+ N Y+ VD++S I+ E
Sbjct: 162 LRILDFGLAR--------QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 213
Query: 348 MIEGCPPFP 356
+++G FP
Sbjct: 214 LLQGKALFP 222
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 23 FDVGPR---YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIK 77
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 135
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 136 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLX 189
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 190 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 24 FDVGPR---YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIK 78
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 79 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 136
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 137 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLX 190
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 191 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 17 FDVGPR---YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIK 71
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 72 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 129
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 130 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLT 183
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 17 FDVGPR---YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIK 71
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 72 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 129
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 130 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLT 183
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 200 LLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARG 259
LL+ +HPN++ + +VTE G+L + ++ A I +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKT 128
Query: 260 MNYLHENRPEAIIHRDLEPSNILR-DDSGH---LKVADFGLSKLLKFANTVKEDRPVTCE 315
+ YLH + ++HRDL+PSNIL D+SG+ +++ DFG +K L+ N + T
Sbjct: 129 VEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTAN 185
Query: 316 ETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF 355
+ APEV + + YD D++S ++L + G PF
Sbjct: 186 -----FVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 24 FDVGPR---YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIK 78
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 79 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 136
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 137 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLT 190
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 25 FDVGPR---YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIK 79
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 80 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 137
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 138 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLT 191
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 16 FDVGPR---YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIK 70
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 71 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 128
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 129 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLT 182
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 23 FDVGPR---YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIK 77
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 135
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 136 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLT 189
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 23 FDVGPR---YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIK 77
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 135
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 136 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARV---ADPDHDHTGFLT 189
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G AVK + ++ + K + +E+A+L+KI+H N+V + +V + +
Sbjct: 47 GKLFAVKCIPKKAL--KGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSG 104
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL---RDDSGH 288
G+L + +KG A + + YLH I+HRDL+P N+L +D+
Sbjct: 105 GELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRM---GIVHRDLKPENLLYYSQDEESK 161
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEM 348
+ ++DFGLSK+ + + C Y APEV + Y VD +S +I +
Sbjct: 162 IMISDFGLSKMEGKGDVM----STACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYIL 215
Query: 349 IEGCPPF 355
+ G PPF
Sbjct: 216 LCGYPPF 222
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 45/286 (15%)
Query: 168 ASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI--RHPNVVQFLGAVTQS----TP 221
WRG +VAVK +F+ ++ +++ E + Q + RH N++ F+ A + T
Sbjct: 23 GKWRGEEVAVK-----IFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 76
Query: 222 MMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLH------ENRPEAIIHRD 275
+ +V++Y G L YL + + +K AL A G+ +LH + +P AI HRD
Sbjct: 77 LWLVSDYHEHGSLFDYLNRYTVTVEGM-IKLALSTASGLAHLHMEIVGTQGKP-AIAHRD 134
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEV------YKN 329
L+ NIL +G +AD GL+ A + P T RY APEV K+
Sbjct: 135 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK-RYMAPEVLDDSINMKH 193
Query: 330 EEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERP---------------- 373
E + D+++ L+ E+ C ++ ++P + P
Sbjct: 194 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 253
Query: 374 --PFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQ 417
P R + + +++ +CW R T +I L +S Q
Sbjct: 254 NIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 299
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 160 ITKGTFRIASW-----RGTQVAVKTLGEEVFTDEDKVKA--FIDELALLQKIRHPNVVQF 212
I KG F + G Q AVK + FT + E ++ ++HP++V+
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 213 LGAVTQSTPMMIVTEYLPKGDLRAYLKQKG----ALKPTLAVKFALDIARGMNYLHENRP 268
L + + +V E++ DL + ++ +A + I + Y H+N
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN- 150
Query: 269 EAIIHRDLEPSNIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
IIHRD++P +L +++S +K+ FG++ L + V R T + APE
Sbjct: 151 --IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH-----FMAPE 203
Query: 326 VYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEK 361
V K E Y VDV+ +IL ++ GC PF +E+
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER 239
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 33/266 (12%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIR-HPNVVQFLGAV--------TQSTPM 222
G + A+K L + +E+K +A I E+ ++K+ HPN+VQF A T
Sbjct: 53 GREYALKRL---LSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109
Query: 223 MIVTEYLPKGDLRAYLKQ---KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPS 279
+++TE L KG L +LK+ +G L +K R + ++H +P IIHRDL+
Sbjct: 110 LLLTE-LCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKP-PIIHRDLKVE 167
Query: 280 NILRDDSGHLKVADFGLSKLLKF---ANTVKEDRPVTCEE----TSWRYAAPEV---YKN 329
N+L + G +K+ DFG + + + + R + EE T+ Y PE+ Y N
Sbjct: 168 NLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSN 227
Query: 330 EEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFRAPTTHYAYGLREL 389
K D+++ IL + PF ++ K I N + T Y L
Sbjct: 228 FPIGEKQDIWALGCILYLLCFRQHPF-----EDGAKLRIVNGKYSIPPHDTQYTV-FHSL 281
Query: 390 IEDCWSEEPFRRPTFRQILMRLDDIS 415
I P R + +++ +L +I+
Sbjct: 282 IRAMLQVNPEERLSIAEVVHQLQEIA 307
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 45/286 (15%)
Query: 168 ASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI--RHPNVVQFLGAVTQS----TP 221
WRG +VAVK +F+ ++ +++ E + Q + RH N++ F+ A + T
Sbjct: 48 GKWRGEEVAVK-----IFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 101
Query: 222 MMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLH------ENRPEAIIHRD 275
+ +V++Y G L YL + + +K AL A G+ +LH + +P AI HRD
Sbjct: 102 LWLVSDYHEHGSLFDYLNRYTVTVEGM-IKLALSTASGLAHLHMEIVGTQGKP-AIAHRD 159
Query: 276 LEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEV------YKN 329
L+ NIL +G +AD GL+ A + P T RY APEV K+
Sbjct: 160 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK-RYMAPEVLDDSINMKH 218
Query: 330 EEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERP---------------- 373
E + D+++ L+ E+ C ++ ++P + P
Sbjct: 219 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 278
Query: 374 --PFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDISDQ 417
P R + + +++ +CW R T +I L +S Q
Sbjct: 279 NIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 324
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKSQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL + +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DSELKILDFGLCRH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 39 FDVGPR---YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIK 93
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 94 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 151
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 152 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLT 205
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 77/171 (45%), Gaps = 22/171 (12%)
Query: 194 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-----QKGALKPTL 248
F +E ++ P VVQ A + +V EY+P GDL + +K A T
Sbjct: 122 FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTA 181
Query: 249 AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKE 308
V ALD M +IHRD++P N+L D GHLK+ADFG + V
Sbjct: 182 EVVLALDAIHSM---------GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHC 232
Query: 309 DRPVTCEETSWRYAAPEVYKNEE----YDTKVDVFSFALILQEMIEGCPPF 355
D V + Y +PEV K++ Y + D +S + L EM+ G PF
Sbjct: 233 DTAVGTPD----YISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 27 FDVGPR---YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIK 81
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 82 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 139
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 140 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLT 193
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 19 FDVGPR---YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIK 73
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 131
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 132 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLT 185
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 21 FDVGPR---YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIK 75
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 76 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 133
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 134 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLT 187
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 23 FDVGPR---YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIK 77
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKCQ-HLSNDHICYFLY 135
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLT 189
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 23 FDVGPR---YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYXQRTLREIK 77
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 135
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 136 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARV---ADPDHDHTGFLT 189
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKXQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DXELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKXQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 53 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 111
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 112 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 166
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 167 DSELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 219 MAELLTGRTLFP 230
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 49 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 107
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 108 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 162
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 163 DSELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 215 MAELLTGRTLFP 226
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 19 FDVGPR---YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIK 73
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 131
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 132 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLT 185
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 92/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L + F K EL LL+ ++H NV+ L T + + + +
Sbjct: 59 GLRVAVKKLSKP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 117
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 118 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 172
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 173 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 224
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 225 MAELLTGRTLFP 236
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 206 HPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHE 265
HPN+V+ +V E L G+L +K+K T A + ++++H+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 266 NRPEAIIHRDLEPSNIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYA 322
++HRDL+P N+L +D+ +K+ DFG ++L +++P+ + YA
Sbjct: 125 ---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL-----KPPDNQPLKTPCFTLHYA 176
Query: 323 APEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPT 357
APE+ YD D++S +IL M+ G PF +
Sbjct: 177 APELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS 211
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 19 FDVGPR---YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIK 73
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 131
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 132 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARV---ADPDHDHTGFLT 185
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 19 FDVGPR---YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIK 73
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 131
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 132 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARV---ADPDHDHTGFLT 185
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 12/186 (6%)
Query: 172 GTQVAVKTLGEEVF-TDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLP 230
G VA+K + + +D ++K E+ L+ +RH ++ Q + + + +V EY P
Sbjct: 35 GEMVAIKIMDKNTLGSDLPRIKT---EIEALKNLRHQHICQLYHVLETANKIFMVLEYCP 91
Query: 231 KGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLK 290
G+L Y+ + L I + Y+H + HRDL+P N+L D+ LK
Sbjct: 92 GGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLK 148
Query: 291 VADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEY-DTKVDVFSFALILQEMI 349
+ DFGL K N K+ TC S YAAPE+ + + Y ++ DV+S ++L ++
Sbjct: 149 LIDFGLCAKPK-GN--KDYHLQTC-CGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLM 204
Query: 350 EGCPPF 355
G PF
Sbjct: 205 CGFLPF 210
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 15/222 (6%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKI 204
+++ P+ + S E G A +V V F + + + E+ +L +
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRF 82
Query: 205 RHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARG 259
RH N++ + Q + IV + L + DL LK + L F I RG
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRG 140
Query: 260 MNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW 319
+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ + E +
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVAT 194
Query: 320 R-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 21 FDVGPR---YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIK 75
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L RH N++ + Q + IV + L + DL LK + L F
Sbjct: 76 ILLAFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 133
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 134 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARV---ADPDHDHTGFLT 187
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILDFGLARH-------TDDEMTGXVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 45 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 103
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 104 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 158
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 159 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 210
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 211 MAELLTGRTLFP 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 59 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 117
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 118 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 172
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 173 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 224
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 225 MAELLTGRTLFP 236
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNE-EYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNAMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 52 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 110
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 111 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 165
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 166 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 218 MAELLTGRTLFP 229
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 59 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 117
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 118 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 172
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 173 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 224
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 225 MAELLTGRTLFP 236
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 66 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 124
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 125 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 179
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 180 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 231
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 232 MAELLTGRTLFP 243
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 53 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 111
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 112 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 166
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 167 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 219 MAELLTGRTLFP 230
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 44 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 102
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 103 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 157
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 158 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 209
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 210 MAELLTGRTLFP 221
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 53 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 111
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 112 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 166
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 167 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 219 MAELLTGRTLFP 230
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 44 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 102
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 103 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 157
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 158 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 209
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 210 MAELLTGRTLFP 221
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 18/212 (8%)
Query: 197 ELALLQKIRH-PNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALD 255
E +L+ IR P +V A T + ++ +Y+ G+L +L Q+ + +
Sbjct: 108 ERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGE 167
Query: 256 IARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCE 315
I + +LH+ II+RD++ NIL D +GH+ + DFGLSK +F E C
Sbjct: 168 IVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK--EFVADETERAYDFC- 221
Query: 316 ETSWRYAAPEVYKNEE--YDTKVDVFSFALILQEMIEGCPPFPTKQEK----EVPKAYIA 369
+ Y AP++ + + +D VD +S +++ E++ G PF EK E+ + +
Sbjct: 222 -GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK 280
Query: 370 NERPPFRAPTTHYAYGLRELIEDCWSEEPFRR 401
+E PP+ + A ++LI+ ++P +R
Sbjct: 281 SE-PPYPQEMSALA---KDLIQRLLMKDPKKR 308
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 49 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 107
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 108 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 162
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 163 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 215 MAELLTGRTLFP 226
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 19 FDVGPR---YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIK 73
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L + RH N++ + Q + IV + L + DL LK + L F
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 131
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 132 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARV---ADPDHDHTGFLT 185
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 43 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 102 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 156
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 157 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 209 MAELLTGRTLFP 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 58 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 116
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 117 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 171
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 172 DXELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 223
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 224 MAELLTGRTLFP 235
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 67 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 126 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 180
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 181 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 232
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 233 MAELLTGRTLFP 244
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 53 GHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 111
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 112 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 166
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 167 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 219 MAELLTGRTLFP 230
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 43 GHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 102 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 156
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 157 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 209 MAELLTGRTLFP 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 52 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 110
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 111 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 165
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 166 DXELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 218 MAELLTGRTLFP 229
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 54 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 113 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 167
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 168 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 219
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 220 MAELLTGRTLFP 231
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 58 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 116
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 117 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 171
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 172 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 223
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 224 MAELLTGRTLFP 235
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 70 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 128
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 129 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 183
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 184 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 235
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 236 MAELLTGRTLFP 247
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 49 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 107
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 108 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 162
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 163 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 215 MAELLTGRTLFP 226
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 52 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 110
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 111 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 165
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 166 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 218 MAELLTGRTLFP 229
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 46 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 104
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 105 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 159
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 160 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 211
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 212 MAELLTGRTLFP 223
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 52 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 110
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 111 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 165
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 166 DXELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 218 MAELLTGRTLFP 229
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 66 GHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 124
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 125 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 179
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 180 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 231
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 232 MAELLTGRTLFP 243
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 14/192 (7%)
Query: 172 GTQVAVKTLGEEVFTDEDKV--KAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYL 229
G VA+K E +++D V K + E+ +L++++HPN+V L + + +V EY
Sbjct: 28 GQIVAIKKFLE---SEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYC 84
Query: 230 PKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHL 289
L + + + L + +N+ H++ IHRD++P NIL +
Sbjct: 85 DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVI 141
Query: 290 KVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNE-EYDTKVDVFSFALILQEM 348
K+ DFG ++LL + +D T W Y +PE+ + +Y VDV++ + E+
Sbjct: 142 KLCDFGFARLLTGPSDYYDDEVA----TRW-YRSPELLVGDTQYGPPVDVWAIGCVFAEL 196
Query: 349 IEGCPPFPTKQE 360
+ G P +P K +
Sbjct: 197 LSGVPLWPGKSD 208
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 67 GHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 126 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 180
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 181 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 232
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 233 MAELLTGRTLFP 244
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 160 ITKGTFRIAS-----WRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLG 214
I G + + S G QVA+K + F K + EL +L+ +H N++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 121
Query: 215 AVTQSTPM-----MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPE 269
+ + P + V L + DL + L F + RG+ Y+H +
Sbjct: 122 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ-- 179
Query: 270 AIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN 329
+IHRDL+PSN+L +++ LK+ DFG+++ L + + T W Y APE+ +
Sbjct: 180 -VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW-YRAPELMLS 237
Query: 330 -EEYDTKVDVFSFALILQEMIEGCPPFPTK 358
EY +D++S I EM+ FP K
Sbjct: 238 LHEYTQAIDLWSVGCIFGEMLARRQLFPGK 267
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 43 GHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 102 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 156
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 157 DCELKILDFGLARH-------TDDEMAGFVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 209 MAELLTGRTLFP 220
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 160 ITKGTFRIAS-----WRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLG 214
I G + + S G QVA+K + F K + EL +L+ +H N++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 120
Query: 215 AVTQSTPM-----MIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPE 269
+ + P + V L + DL + L F + RG+ Y+H +
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ-- 178
Query: 270 AIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWR-YAAPEVYK 328
+IHRDL+PSN+L +++ LK+ DFG+++ L + E + E + R Y APE+
Sbjct: 179 -VIHRDLKPSNLLVNENCELKIGDFGMARGL--CTSPAEHQYFMTEYVATRWYRAPELML 235
Query: 329 N-EEYDTKVDVFSFALILQEMIEGCPPFPTKQ 359
+ EY +D++S I EM+ FP K
Sbjct: 236 SLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 267
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 25/227 (11%)
Query: 145 YEIDPKELDFSNSVEITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELA 199
+++ P+ ++N I +G + + + +VA+K + F + + + E+
Sbjct: 21 FDVGPR---YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIK 75
Query: 200 LLQKIRHPNVVQF-----LGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
+L RH N++ + Q + IV + L + DL LK + L F
Sbjct: 76 ILLAFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLY 133
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTC 314
I RG+ Y+H ++HRDL+PSN+L + + LK+ DFGL+++ A+ +
Sbjct: 134 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLT 187
Query: 315 EETSWR-YAAPEVYKNEE-YDTKVDVFSFALILQEMIEGCPPFPTKQ 359
E + R Y APE+ N + Y +D++S IL EM+ P FP K
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 49 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 107
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 108 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 162
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 163 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 215 MAELLTGRTLFP 226
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILDFGLARH-------TDDEMAGFVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILDFGLARH-------TDDEMAGFVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 57 GHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 115
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 116 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 170
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 171 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 222
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 223 MAELLTGRTLFP 234
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLP 230
G VAVK L F ++ K EL LL+ + H N++ L T Q T YL
Sbjct: 49 GINVAVKKLSRP-FQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 107
Query: 231 KGDLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSN 280
+ A L Q + LD R G+ +LH IIHRDL+PSN
Sbjct: 108 MELMDANLCQ--------VIHMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSN 156
Query: 281 ILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFS 340
I+ LK+ DFGL A T + +T + Y APEV Y VD++S
Sbjct: 157 IVVKSDCTLKILDFGL------ARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWS 210
Query: 341 FALILQEMIEGCPPF 355
I+ E+++GC F
Sbjct: 211 VGCIMGELVKGCVIF 225
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 70 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 128
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 129 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 183
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 184 DCELKILDFGLARH-------TDDEMXGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 235
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 236 MAELLTGRTLFP 247
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 67 GHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 126 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 180
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 181 DCELKILDFGLARH-------TDDEMXGXVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 232
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 233 MAELLTGRTLFP 244
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 32/297 (10%)
Query: 126 GAKPSTAPMHV--QNAREVPEYEIDPKE----LD-FSNSVEITKGTFRIASWR--GTQVA 176
G+ P P V + R + +DP + LD F E + G IA+ R G VA
Sbjct: 1 GSSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVA 60
Query: 177 VKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRA 236
VK + + + + +E+ +++ +H NVV+ + + +V E+L G L
Sbjct: 61 VKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 117
Query: 237 YLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGL 296
+ + +A L + + ++ LH + +IHRD++ +IL G +K++DFG
Sbjct: 118 IVTHTRMNEEQIAA-VCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFG- 172
Query: 297 SKLLKFANTVKEDRPVTCEETSWRY-AAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPF 355
F V ++ P Y APE+ Y +VD++S +++ EM++G PP+
Sbjct: 173 -----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 227
Query: 356 ----PTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
P K K I + PP + L+ ++ +P +R T ++L
Sbjct: 228 FNEPPLKAMK-----MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 279
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 54 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 113 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 167
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ D T W Y APE+ N Y+ VD++S I
Sbjct: 168 DCELKILDFGLARH-------TADEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 219
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 220 MAELLTGRTLFP 231
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 54 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 113 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 167
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ D T W Y APE+ N Y+ VD++S I
Sbjct: 168 DCELKILDFGLARH-------TADEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 219
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 220 MAELLTGRTLFP 231
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 43 GHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K A V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 102 THLMGADLNNIVK--CAKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 156
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 157 DCELKILDFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 209 MAELLTGRTLFP 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 54 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 113 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 167
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DFGL++ D T W Y APE+ N Y+ VD++S I
Sbjct: 168 DCELKILDFGLARH-------TADEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 219
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 220 MAELLTGRTLFP 231
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 30/263 (11%)
Query: 153 DFSNSVEITKGTF-RIASWR----GTQVAVKTLGEEVFTDEDKVKAFIDE---LALLQKI 204
DFS I +G F + R G A+K L ++ + ++E L+L+
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 248
Query: 205 RHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLH 264
P +V A + + + + GDL +L Q G +A +I G+ ++H
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 308
Query: 265 ENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAP 324
NR +++RDL+P+NIL D+ GH++++D GL A + +P T Y AP
Sbjct: 309 -NR--FVVYRDLKPANILLDEHGHVRISDLGL------ACDFSKKKPHASVGTHG-YMAP 358
Query: 325 EVY-KNEEYDTKVDVFSFALILQEMIEGCPPF---PTKQEKEVPKAYI--ANERPPFRAP 378
EV K YD+ D FS +L +++ G PF TK + E+ + + A E P +P
Sbjct: 359 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP 418
Query: 379 TTHYAYGLRELIEDCWSEEPFRR 401
LR L+E + RR
Sbjct: 419 E------LRSLLEGLLQRDVNRR 435
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 30/263 (11%)
Query: 153 DFSNSVEITKGTF-RIASWR----GTQVAVKTLGEEVFTDEDKVKAFIDE---LALLQKI 204
DFS I +G F + R G A+K L ++ + ++E L+L+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 205 RHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLH 264
P +V A + + + + GDL +L Q G +A +I G+ ++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 265 ENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAP 324
NR +++RDL+P+NIL D+ GH++++D GL A + +P T Y AP
Sbjct: 310 -NR--FVVYRDLKPANILLDEHGHVRISDLGL------ACDFSKKKPHASVGTHG-YMAP 359
Query: 325 EVY-KNEEYDTKVDVFSFALILQEMIEGCPPF---PTKQEKEVPKAYI--ANERPPFRAP 378
EV K YD+ D FS +L +++ G PF TK + E+ + + A E P +P
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP 419
Query: 379 TTHYAYGLRELIEDCWSEEPFRR 401
LR L+E + RR
Sbjct: 420 E------LRSLLEGLLQRDVNRR 436
>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure
Length = 115
Score = 70.9 bits (172), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/92 (41%), Positives = 54/92 (58%)
Query: 36 DPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGAD 95
D L A G + +K+LL G DVN R D T LH+AA G ++V+LLL++GAD
Sbjct: 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD 67
Query: 96 VDPEDRWGSTPLADAVYYKHHDVIKLLEEHGA 127
V+ + G+TP A HH+++KLL+ GA
Sbjct: 68 VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGA 99
Score = 45.1 bits (105), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 36 DPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGAD 95
D L A G + +K LL G DVN R D T H+A G ++V+LL ++GAD
Sbjct: 41 DGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGAD 100
Query: 96 VDPEDRWGST 105
V+ WGS+
Sbjct: 101 VNARS-WGSS 109
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 30/263 (11%)
Query: 153 DFSNSVEITKGTF-RIASWR----GTQVAVKTLGEEVFTDEDKVKAFIDE---LALLQKI 204
DFS I +G F + R G A+K L ++ + ++E L+L+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 205 RHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLH 264
P +V A + + + + GDL +L Q G +A +I G+ ++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 265 ENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAP 324
NR +++RDL+P+NIL D+ GH++++D GL A + +P T Y AP
Sbjct: 310 -NR--FVVYRDLKPANILLDEHGHVRISDLGL------ACDFSKKKPHASVGTHG-YMAP 359
Query: 325 EVY-KNEEYDTKVDVFSFALILQEMIEGCPPF---PTKQEKEVPKAYI--ANERPPFRAP 378
EV K YD+ D FS +L +++ G PF TK + E+ + + A E P +P
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP 419
Query: 379 TTHYAYGLRELIEDCWSEEPFRR 401
LR L+E + RR
Sbjct: 420 E------LRSLLEGLLQRDVNRR 436
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 30/263 (11%)
Query: 153 DFSNSVEITKGTF-RIASWR----GTQVAVKTLGEEVFTDEDKVKAFIDE---LALLQKI 204
DFS I +G F + R G A+K L ++ + ++E L+L+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 205 RHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLH 264
P +V A + + + + GDL +L Q G +A +I G+ ++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 265 ENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAP 324
NR +++RDL+P+NIL D+ GH++++D GL A + +P T Y AP
Sbjct: 310 -NR--FVVYRDLKPANILLDEHGHVRISDLGL------ACDFSKKKPHASVGTHG-YMAP 359
Query: 325 EVY-KNEEYDTKVDVFSFALILQEMIEGCPPF---PTKQEKEVPKAYI--ANERPPFRAP 378
EV K YD+ D FS +L +++ G PF TK + E+ + + A E P +P
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP 419
Query: 379 TTHYAYGLRELIEDCWSEEPFRR 401
LR L+E + RR
Sbjct: 420 E------LRSLLEGLLQRDVNRR 436
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 107/244 (43%), Gaps = 47/244 (19%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTP----MMIVTEYLPKGDLRAYLKQKGALKPTLAVKF 252
E+ L ++H N++QF+GA + T + ++T + KG L +LK L
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELC-HI 126
Query: 253 ALDIARGMNYLHENRPE-------AIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANT 305
A +ARG+ YLHE+ P AI HRD++ N+L ++ +ADFGL+ LKF
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA--LKF-EA 183
Query: 306 VKEDRPVTCEETSWRYAAPEVYK---NEEYDT--KVDVFSFALILQEMIEGC-------- 352
K + + RY APEV + N + D ++D+++ L+L E+ C
Sbjct: 184 GKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD 243
Query: 353 -------------PPFPTKQEKEVPKAYIANERPPFRAPTTHYA--YGLRELIEDCWSEE 397
P QE V K +RP R +A L E IE+CW +
Sbjct: 244 EYMLPFEEEIGQHPSLEDMQEVVVHK----KKRPVLRDYWQKHAGMAMLCETIEECWDHD 299
Query: 398 PFRR 401
R
Sbjct: 300 AEAR 303
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ D+GL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILDYGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVKTLGEEVFTDEDKVKAFID-ELALLQ 202
P+E+ ++++ I G+F + G VA+K + + KAF + EL +++
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG--------KAFKNRELQIMR 68
Query: 203 KIRHPNVVQFL------GAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 127
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 128 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 178
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVKTLGEEVFTDEDKVKAFID-ELALLQ 202
P+E+ ++++ I G+F + G VA+K + + KAF + EL +++
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG--------KAFKNRELQIMR 68
Query: 203 KIRHPNVVQFL------GAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 127
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 128 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 178
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVKTLGEEVFTDEDKVKAFID-ELALLQ 202
P+E+ ++++ I G+F + G VA+K + + KAF + EL +++
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG--------KAFKNRELQIMR 68
Query: 203 KIRHPNVVQFL------GAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P R Y + K L P + VK +
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTL-PVIYVKLY 127
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 128 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 178
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQ 202
P+E+ ++++ I G+F + G VA+K L ++ F + EL +++
Sbjct: 51 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMR 102
Query: 203 KIRHPNVVQF------LGAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 103 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 161
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 162 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 212
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 213 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 258
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQ 202
P+E+ ++++ I G+F + G VA+K L ++ F + EL +++
Sbjct: 29 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMR 80
Query: 203 KIRHPNVVQFL------GAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 81 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 139
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 140 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 190
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 236
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQ 202
P+E+ ++++ I G+F + G VA+K L ++ F + EL +++
Sbjct: 29 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMR 80
Query: 203 KIRHPNVVQFL------GAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 81 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 139
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 140 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 190
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 236
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQ 202
P+E+ ++++ I G+F + G VA+K L ++ F + EL +++
Sbjct: 25 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMR 76
Query: 203 KIRHPNVVQFL------GAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 77 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 135
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 136 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 186
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 187 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQ 202
P+E+ ++++ I G+F + G VA+K L ++ F + EL +++
Sbjct: 36 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMR 87
Query: 203 KIRHPNVVQFL------GAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 88 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 146
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 147 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 197
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 198 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 243
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQ 202
P+E+ ++++ I G+F + G VA+K L ++ F + EL +++
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMR 68
Query: 203 KIRHPNVVQFL------GAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 127
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 128 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 178
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQ 202
P+E+ ++++ I G+F + G VA+K L ++ F + EL +++
Sbjct: 18 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMR 69
Query: 203 KIRHPNVVQFL------GAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 70 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 128
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 129 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 179
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 180 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 225
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQ 202
P+E+ ++++ I G+F + G VA+K L ++ F + EL +++
Sbjct: 51 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMR 102
Query: 203 KIRHPNVVQF------LGAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 103 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 161
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 162 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 212
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 213 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 258
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQ 202
P+E+ ++++ I G+F + G VA+K L ++ F + EL +++
Sbjct: 21 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMR 72
Query: 203 KIRHPNVVQFL------GAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 73 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 131
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 132 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 182
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 183 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 228
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 27/270 (10%)
Query: 148 DPKEL--DFSNSVEITKGTFRIASWR--GTQVAVKTLGEEVFTDEDKVKAFIDELALLQK 203
DP+ +F E + G IA+ R G VAVK + + + + +E+ +++
Sbjct: 21 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRD 77
Query: 204 IRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYL 263
+H NVV+ + + +V E+L G L + + +A L + + ++ L
Sbjct: 78 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQALSVL 136
Query: 264 HENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRY-A 322
H + +IHRD++ +IL G +K++DFG F V ++ P Y
Sbjct: 137 HA---QGVIHRDIKSDSILLTHDGRVKLSDFG------FCAQVSKEVPRRKXLVGTPYWM 187
Query: 323 APEVYKNEEYDTKVDVFSFALILQEMIEGCPPF----PTKQEKEVPKAYIANERPPFRAP 378
APE+ Y +VD++S +++ EM++G PP+ P K K I + PP
Sbjct: 188 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-----MIRDNLPPRLKN 242
Query: 379 TTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ L+ ++ +P +R T ++L
Sbjct: 243 LHKVSPSLKGFLDRLLVRDPAQRATAAELL 272
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQ 202
P+E+ ++++ I G+F + G VA+K L ++ F + EL +++
Sbjct: 30 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMR 81
Query: 203 KIRHPNVVQFL------GAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 82 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 140
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 141 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 191
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 192 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 237
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQ 202
P+E+ ++++ I G+F + G VA+K L ++ F + EL +++
Sbjct: 45 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMR 96
Query: 203 KIRHPNVVQF------LGAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 97 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 155
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 156 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 206
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 207 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 252
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 161 TKGTFRIASWRGTQVAVKTLGEEVFTD---EDKVKAFIDELALLQKIRHPNVVQF----- 212
T GT ++ + T ++V ++V D ++ + +LA+L HPN+VQ
Sbjct: 35 TFGTVQLGKEKSTGMSVAI--KKVIQDPRFRNRELQIMQDLAVLH---HPNIVQLQSYFY 89
Query: 213 -LGAVTQ-STPMMIVTEYLPKG---DLRAYLKQKGALKPTLAVKFALDIARGMNYLHENR 267
LG + + +V EY+P R Y +++ A P L F + R + LH
Sbjct: 90 TLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH--L 147
Query: 268 PEA-IIHRDLEPSNILRDDS-GHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPE 325
P + HRD++P N+L +++ G LK+ DFG +K L P S Y APE
Sbjct: 148 PSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS------PSEPNVAYICSRYYRAPE 201
Query: 326 -VYKNEEYDTKVDVFSFALILQEMIEGCPPF 355
++ N+ Y T VD++S I EM+ G P F
Sbjct: 202 LIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQ 202
P+E+ ++++ I G+F + G VA+K L ++ F + EL +++
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMR 68
Query: 203 KIRHPNVVQFL------GAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 127
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 128 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 178
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQ 202
P+E+ ++++ I G+F + G VA+K L ++ F + EL +++
Sbjct: 55 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMR 106
Query: 203 KIRHPNVVQF------LGAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 107 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 165
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 166 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 216
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 217 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 262
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQ 202
P+E+ ++++ I G+F + G VA+K L ++ F + EL +++
Sbjct: 22 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMR 73
Query: 203 KIRHPNVVQF------LGAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 74 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 132
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 133 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 183
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 184 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 229
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQ 202
P+E+ ++++ I G+F + G VA+K L ++ F + EL +++
Sbjct: 96 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMR 147
Query: 203 KIRHPNVVQF------LGAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 148 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 206
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 207 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 257
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 258 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 303
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQ 202
P+E+ ++++ I G+F + G VA+K L ++ F + EL +++
Sbjct: 53 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMR 104
Query: 203 KIRHPNVVQF------LGAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 105 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 163
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 164 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 214
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 215 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 260
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 17/170 (10%)
Query: 250 VKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSK-LLKFANTVKE 308
+ ++ +A+GM +L + IHRDL NIL + +K+ DFGL++ + K + V++
Sbjct: 196 ICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 252
Query: 309 DRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFP-TKQEKEVPKA 366
++ APE + Y + DV+SF ++L E+ G P+P K ++E +
Sbjct: 253 GDA----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 308
Query: 367 YIANERPPFRAP--TTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
R RAP TT Y + + DCW EP +RPTF +++ L ++
Sbjct: 309 LKEGTR--MRAPDYTTPEMY---QTMLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQ 202
P+E+ ++++ I G+F + G VA+K L ++ F + EL +++
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMR 68
Query: 203 KIRHPNVVQFL------GAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 127
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 128 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 178
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 17/170 (10%)
Query: 250 VKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSK-LLKFANTVKE 308
+ ++ +A+GM +L + IHRDL NIL + +K+ DFGL++ + K + V++
Sbjct: 194 ICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 250
Query: 309 DRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFP-TKQEKEVPKA 366
++ APE + Y + DV+SF ++L E+ G P+P K ++E +
Sbjct: 251 GDA----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 306
Query: 367 YIANERPPFRAP--TTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
R RAP TT Y + + DCW EP +RPTF +++ L ++
Sbjct: 307 LKEGTR--MRAPDYTTPEMY---QTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 149 PKELDFSNSVEITKGTFRIASW-----RGTQVAVK-TLGEEVFTDEDKVKAFIDELALLQ 202
P+E+ ++++ I G+F + G VA+K L ++ F + EL +++
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMR 68
Query: 203 KIRHPNVVQFL------GAVTQSTPMMIVTEYLPKGDLRA---YLKQKGALKPTLAVK-F 252
K+ H N+V+ G + +V +Y+P+ R Y + K L P + VK +
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLY 127
Query: 253 ALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRP 311
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L P
Sbjct: 128 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV------RGEP 178
Query: 312 VTCEETSWRYAAPE-VYKNEEYDTKVDVFSFALILQEMIEGCPPFP 356
S Y APE ++ +Y + +DV+S +L E++ G P FP
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 17/170 (10%)
Query: 250 VKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSK-LLKFANTVKE 308
+ ++ +A+GM +L + IHRDL NIL + +K+ DFGL++ + K + V++
Sbjct: 203 ICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 259
Query: 309 DRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFP-TKQEKEVPKA 366
++ APE + Y + DV+SF ++L E+ G P+P K ++E +
Sbjct: 260 GDA----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 315
Query: 367 YIANERPPFRAP--TTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
R RAP TT Y + + DCW EP +RPTF +++ L ++
Sbjct: 316 LKEGTR--MRAPDYTTPEMY---QTMLDCWHGEPSQRPTFSELVEHLGNL 360
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 27/270 (10%)
Query: 148 DPKEL--DFSNSVEITKGTFRIASWR--GTQVAVKTLGEEVFTDEDKVKAFIDELALLQK 203
DP+ +F E + G IA+ R G VAVK + + + + +E+ +++
Sbjct: 26 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRD 82
Query: 204 IRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYL 263
+H NVV+ + + +V E+L G L + + +A L + + ++ L
Sbjct: 83 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQALSVL 141
Query: 264 HENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRY-A 322
H + +IHRD++ +IL G +K++DFG F V ++ P Y
Sbjct: 142 HA---QGVIHRDIKSDSILLTHDGRVKLSDFG------FCAQVSKEVPRRKXLVGTPYWM 192
Query: 323 APEVYKNEEYDTKVDVFSFALILQEMIEGCPPF----PTKQEKEVPKAYIANERPPFRAP 378
APE+ Y +VD++S +++ EM++G PP+ P K K I + PP
Sbjct: 193 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-----MIRDNLPPRLKN 247
Query: 379 TTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ L+ ++ +P +R T ++L
Sbjct: 248 LHKVSPSLKGFLDRLLVRDPAQRATAAELL 277
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 17/170 (10%)
Query: 250 VKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSK-LLKFANTVKE 308
+ ++ +A+GM +L + IHRDL NIL + +K+ DFGL++ + K + V++
Sbjct: 201 ICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 257
Query: 309 DRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIE-GCPPFP-TKQEKEVPKA 366
++ APE + Y + DV+SF ++L E+ G P+P K ++E +
Sbjct: 258 GDA----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 313
Query: 367 YIANERPPFRAP--TTHYAYGLRELIEDCWSEEPFRRPTFRQILMRLDDI 414
R RAP TT Y + + DCW EP +RPTF +++ L ++
Sbjct: 314 LKEGTR--MRAPDYTTPEMY---QTMLDCWHGEPSQRPTFSELVEHLGNL 358
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 27/270 (10%)
Query: 148 DPKEL--DFSNSVEITKGTFRIASWR--GTQVAVKTLGEEVFTDEDKVKAFIDELALLQK 203
DP+ +F E + G IA+ R G VAVK + + + + +E+ +++
Sbjct: 17 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRD 73
Query: 204 IRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYL 263
+H NVV+ + + +V E+L G L + + +A L + + ++ L
Sbjct: 74 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQALSVL 132
Query: 264 HENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRY-A 322
H + +IHRD++ +IL G +K++DFG F V ++ P Y
Sbjct: 133 HA---QGVIHRDIKSDSILLTHDGRVKLSDFG------FCAQVSKEVPRRKXLVGTPYWM 183
Query: 323 APEVYKNEEYDTKVDVFSFALILQEMIEGCPPF----PTKQEKEVPKAYIANERPPFRAP 378
APE+ Y +VD++S +++ EM++G PP+ P K K I + PP
Sbjct: 184 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-----MIRDNLPPRLKN 238
Query: 379 TTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ L+ ++ +P +R T ++L
Sbjct: 239 LHKVSPSLKGFLDRLLVRDPAQRATAAELL 268
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 27/270 (10%)
Query: 148 DPKEL--DFSNSVEITKGTFRIASWR--GTQVAVKTLGEEVFTDEDKVKAFIDELALLQK 203
DP+ +F E + G IA+ R G VAVK + + + + +E+ +++
Sbjct: 71 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRD 127
Query: 204 IRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYL 263
+H NVV+ + + +V E+L G L + + +A L + + ++ L
Sbjct: 128 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQALSVL 186
Query: 264 HENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRY-A 322
H + +IHRD++ +IL G +K++DFG F V ++ P Y
Sbjct: 187 HA---QGVIHRDIKSDSILLTHDGRVKLSDFG------FCAQVSKEVPRRKXLVGTPYWM 237
Query: 323 APEVYKNEEYDTKVDVFSFALILQEMIEGCPPF----PTKQEKEVPKAYIANERPPFRAP 378
APE+ Y +VD++S +++ EM++G PP+ P K K I + PP
Sbjct: 238 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-----MIRDNLPPRLKN 292
Query: 379 TTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ L+ ++ +P +R T ++L
Sbjct: 293 LHKVSPSLKGFLDRLLVRDPAQRATAAELL 322
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ FGL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILGFGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 21/197 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G + AVK + ++ + + F + L Q + N+++ + T +V E L
Sbjct: 38 GKEYAVKIIEKQ--AGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQG 95
Query: 232 GDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDD---SGH 288
G + A+++++ A + D+A +++LH + I HRDL+P NIL +
Sbjct: 96 GSILAHIQKQKHFNEREASRVVRDVAAALDFLH---TKGIAHRDLKPENILCESPEKVSP 152
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEE-----TSWRYAAPEVY-----KNEEYDTKVDV 338
+K+ DF L +K N+ P+T E S Y APEV + YD + D+
Sbjct: 153 VKICDFDLGSGMKLNNSCT---PITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDL 209
Query: 339 FSFALILQEMIEGCPPF 355
+S ++L M+ G PPF
Sbjct: 210 WSLGVVLYIMLSGYPPF 226
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 27/220 (12%)
Query: 197 ELALLQKIR----HPNVVQFLGAV-TQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVK 251
E+ALL K+ HP V++ L TQ M+++ LP DL Y+ +KG L +
Sbjct: 84 EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRC 143
Query: 252 FALDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDR 310
F + + + H ++HRD++ NIL D G K+ DFG LL D
Sbjct: 144 FFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFGSGALL-------HDE 193
Query: 311 PVTCEETSWRYAAPEVYKNEEYDT-KVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIA 369
P T + + Y+ PE +Y V+S ++L +M+ C P ++++E+ +A +
Sbjct: 194 PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMV--CGDIPFERDQEILEAELH 251
Query: 370 NERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQILM 409
F A H + LI C + +P RP+ +IL+
Sbjct: 252 -----FPA---HVSPDCCALIRRCLAPKPSSRPSLEEILL 283
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 16/234 (6%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL 234
VA+K L + E E+ + + HPN+++ + ++ EY P+G+L
Sbjct: 51 VALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL 110
Query: 235 RAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADF 294
L++ ++A + Y H + +IHRD++P N+L G LK+ADF
Sbjct: 111 YKELQKSCTFDEQRTATIMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADF 167
Query: 295 GLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPP 354
G S + R C + Y PE+ + ++ KVD++ ++ E++ G PP
Sbjct: 168 GWS-----VHAPSLRRKTMC--GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPP 220
Query: 355 FPTKQEKEVPKAYI-ANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
F + E + + + + P PT G ++LI P R Q+
Sbjct: 221 FESASHNETYRRIVKVDLKFPASVPT-----GAQDLISKLLRHNPSERLPLAQV 269
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 117/263 (44%), Gaps = 25/263 (9%)
Query: 153 DFSNSVEITKGTFRIASWR--GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVV 210
+F E + G IA+ R G VAVK + + + + +E+ +++ +H NVV
Sbjct: 155 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVV 211
Query: 211 QFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEA 270
+ + + +V E+L G L + + +A L + + ++ LH +
Sbjct: 212 EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQALSVLHA---QG 267
Query: 271 IIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRY-AAPEVYKN 329
+IHRD++ +IL G +K++DFG F V ++ P Y APE+
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFG------FCAQVSKEVPRRKXLVGTPYWMAPELISR 321
Query: 330 EEYDTKVDVFSFALILQEMIEGCPPF----PTKQEKEVPKAYIANERPPFRAPTTHYAYG 385
Y +VD++S +++ EM++G PP+ P K K I + PP +
Sbjct: 322 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-----MIRDNLPPRLKNLHKVSPS 376
Query: 386 LRELIEDCWSEEPFRRPTFRQIL 408
L+ ++ +P +R T ++L
Sbjct: 377 LKGFLDRLLVRDPAQRATAAELL 399
>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex)
Length = 169
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A G L+ ++ LL G DVN DI T LH+AA G ++V +LL GADV+ D
Sbjct: 51 LHLAATYGHLEIVEVLLKHGADVNAIDIXGSTPLHLAALIGHLEIVEVLLKHGADVNAVD 110
Query: 101 RWGSTPLADAVYYKHHDVIKLLEEHGA 127
WG TPL A H +++++L +HGA
Sbjct: 111 TWGDTPLHLAAIMGHLEIVEVLLKHGA 137
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ A G D ++ L+ +G DVN D T LH+AA G ++V +LL GADV+
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAI 76
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGAKPSTA------PMHV 136
D GSTPL A H +++++L +HGA + P+H+
Sbjct: 77 DIXGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHL 119
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 48 GDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPL 107
G L+ ++ LL G DVN D T LH+AA G ++V +LL GADV+ +D++G T
Sbjct: 91 GHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAF 150
Query: 108 ADAVYYKHHDVIKLLEE 124
++ + D+ ++L++
Sbjct: 151 DISIDNGNEDLAEILQK 167
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 34/274 (12%)
Query: 153 DFSNSVEITKGTFRIASW-----RGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
D +E+ +G + + G +AVK + V + E K + +D ++ + P
Sbjct: 8 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK-RLLMDLDISMRTVDCP 66
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ---KGALKPT-LAVKFALDIARGMNYL 263
V F GA+ + + I E L L + KQ KG P + K A+ I + + +L
Sbjct: 67 FTVTFYGALFREGDVWICME-LMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 125
Query: 264 HENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAA 323
H ++IHRD++PSN+L + G +K+ DFG+S L + V +D C+ Y A
Sbjct: 126 HSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDDVAKDIDAGCKP----YMA 177
Query: 324 PEVYKNE----EYDTKVDVFSFALILQEMIEGCPPF-----PTKQEKEVPKAYIANERPP 374
PE E Y K D++S + + E+ P+ P +Q K+V E P
Sbjct: 178 PERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV------VEEPS 231
Query: 375 FRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ P ++ + C + RPT+ +++
Sbjct: 232 PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 265
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ D GL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILDAGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ D GL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILDRGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ D GL++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILDGGLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 84/194 (43%), Gaps = 29/194 (14%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKG 232
VA+K L F ++ K EL L++ + H N++ L T Q + Y+
Sbjct: 51 NVAIKKLSRP-FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 233 DLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNIL 282
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 110 LMDANLSQ--------VIQMELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIV 158
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFA 342
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 159 VKSDATLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 343 LILQEMIEGCPPFP 356
+I+ EMI+G FP
Sbjct: 213 VIMGEMIKGGVLFP 226
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 21/192 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPM-----MIVT 226
G +VAVK L F K EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 227 EYLPKGDLRAYLKQKGALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDD 285
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQKLTDD--HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 286 SGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALI 344
LK+ DF L++ +D T W Y APE+ N Y+ VD++S I
Sbjct: 161 DCELKILDFYLARH-------TDDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 345 LQEMIEGCPPFP 356
+ E++ G FP
Sbjct: 213 MAELLTGRTLFP 224
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 84/194 (43%), Gaps = 29/194 (14%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKG 232
VA+K L F ++ K EL L++ + H N++ L T Q + Y+
Sbjct: 51 NVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 233 DLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNIL 282
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 110 LMDANLCQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 158
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFA 342
LK+ DFGL A T +T E + Y APEV Y VD++S
Sbjct: 159 VKSDCTLKILDFGL------ARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 343 LILQEMIEGCPPFP 356
I+ EMI+G FP
Sbjct: 213 CIMGEMIKGGVLFP 226
>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|D Chain D, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 136
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 54/88 (61%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ A G D ++ L+ +G DVN D D T LH+AA G ++V +LL GADV+ E
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAE 76
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGA 127
D +G TPL A H +++++L +HGA
Sbjct: 77 DNFGITPLHLAAIRGHLEIVEVLLKHGA 104
Score = 53.1 bits (126), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 49/84 (58%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A G L+ ++ LL G DVN D T LH+AA +G ++V +LL GADV+ +D
Sbjct: 51 LHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAIRGHLEIVEVLLKHGADVNAQD 110
Query: 101 RWGSTPLADAVYYKHHDVIKLLEE 124
++G T ++ + D+ ++L++
Sbjct: 111 KFGKTAFDISIDNGNEDLAEILQK 134
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 84/194 (43%), Gaps = 29/194 (14%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKG 232
VA+K L F ++ K EL L++ + H N++ L T Q + Y+
Sbjct: 51 NVAIKKLSRP-FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 233 DLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNIL 282
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 110 LMDANLSQ--------VIQMELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIV 158
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFA 342
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 159 VKSDATLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 343 LILQEMIEGCPPFP 356
+I+ EMI+G FP
Sbjct: 213 VIMGEMIKGGVLFP 226
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 83/195 (42%), Gaps = 29/195 (14%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLP 230
G VAVK L F ++ K EL LL+ + H N++ L T Q T YL
Sbjct: 47 GINVAVKKLSRP-FQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 105
Query: 231 KGDLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSN 280
+ A L Q + LD R G+ +LH IIHRDL+PSN
Sbjct: 106 MELMDANLCQ--------VIHMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSN 154
Query: 281 ILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFS 340
I+ LK+ DFGL A T + +T + Y APEV Y VD++S
Sbjct: 155 IVVKSDCTLKILDFGL------ARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 208
Query: 341 FALILQEMIEGCPPF 355
I+ E+++G F
Sbjct: 209 VGCIMGELVKGSVIF 223
>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin
pdb|4DRX|F Chain F, Gtp-Tubulin In Complex With A Darpin
Length = 169
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A G L+ ++ LL G DVN DI T LH+AA G ++V +LL GADV+ D
Sbjct: 51 LHLAATYGHLEIVEVLLKHGADVNAIDIMGSTPLHLAALIGHLEIVEVLLKHGADVNAVD 110
Query: 101 RWGSTPLADAVYYKHHDVIKLLEEHGA 127
WG TPL A H +++++L +HGA
Sbjct: 111 TWGDTPLHLAAIMGHLEIVEVLLKHGA 137
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ A G D ++ L+ +G DVN D T LH+AA G ++V +LL GADV+
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAI 76
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGAKPSTA------PMHV 136
D GSTPL A H +++++L +HGA + P+H+
Sbjct: 77 DIMGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHL 119
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 48 GDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPL 107
G L+ ++ LL G DVN D T LH+AA G ++V +LL GADV+ +D++G T
Sbjct: 91 GHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAF 150
Query: 108 ADAVYYKHHDVIKLLEE 124
++ + D+ ++L++
Sbjct: 151 DISIDNGNEDLAEILQK 167
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 163 GTFRIASWRGT--QVAVKTLGEEVFT-----DEDKVKAFIDELALLQKIRHPNVVQFLGA 215
G ++A R T +VA+K + + F + D E+ +L+K+ HP +++ +
Sbjct: 24 GEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKN 82
Query: 216 VTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
+ IV E + G+L + LK + + + YLHEN IIHRD
Sbjct: 83 FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRD 139
Query: 276 LEPSNIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVY---KN 329
L+P N+L +++ +K+ DFG SK+L + ++ C + Y APEV
Sbjct: 140 LKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR----TLCGTPT--YLAPEVLVSVGT 193
Query: 330 EEYDTKVDVFSFALILQEMIEGCPPF 355
Y+ VD +S +IL + G PPF
Sbjct: 194 AGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex
Length = 169
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ A G D ++ L+ +G DVN D +T LH+AA +G ++V +LL GADV+
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAA 76
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGAKPST------APMHV 136
D+ G TPL A Y H +++++L ++GA + P+H+
Sbjct: 77 DKMGDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHL 119
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A +G L+ ++ LL G DVN D T LH+AA G ++V +LL GADV+ D
Sbjct: 51 LHLAAIKGHLEIVEVLLKHGADVNAADKMGDTPLHLAALYGHLEIVEVLLKNGADVNATD 110
Query: 101 RWGSTPLADAVYYKHHDVIKLLEEHGA 127
+G TPL A H +++++L ++GA
Sbjct: 111 TYGFTPLHLAADAGHLEIVEVLLKYGA 137
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 48 GDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPL 107
G L+ ++ LL +G DVN D T LH+AA G ++V +LL GADV+ +D++G T
Sbjct: 91 GHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVNAQDKFGKTAF 150
Query: 108 ADAVYYKHHDVIKLLEE 124
++ + D+ ++L++
Sbjct: 151 DISIDNGNEDLAEILQK 167
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 163 GTFRIASWRGT--QVAVKTLGEEVFT-----DEDKVKAFIDELALLQKIRHPNVVQFLGA 215
G ++A R T +VA+K + + F + D E+ +L+K+ HP +++ +
Sbjct: 24 GEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKN 82
Query: 216 VTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
+ IV E + G+L + LK + + + YLHEN IIHRD
Sbjct: 83 FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRD 139
Query: 276 LEPSNIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVY---KN 329
L+P N+L +++ +K+ DFG SK+L + ++ C + Y APEV
Sbjct: 140 LKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR----TLCGTPT--YLAPEVLVSVGT 193
Query: 330 EEYDTKVDVFSFALILQEMIEGCPPF 355
Y+ VD +S +IL + G PPF
Sbjct: 194 AGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1
Length = 167
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
Query: 31 GSEAIDPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKR--TALHVAACQGRTDVVRL 88
GS + +L+ A GD++ +K+L + VN RDI+ R T LH AA R VV
Sbjct: 4 GSGNSEADRQLLEAAKAGDVETVKKLC-TVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEY 62
Query: 89 LLSRGADVDPEDRWGSTPLADAVYYKHHDVIKLLEEHGAKPSTA------PMHVQNAREV 142
LL GADV +D+ G PL +A Y H++V +LL +HGA + A P+H A+
Sbjct: 63 LLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAK-- 120
Query: 143 PEYEI 147
+YEI
Sbjct: 121 GKYEI 125
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 56 LLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPL 107
L+ G VN D+ K T LH AA +G+ ++ +LLL GAD ++R G+TPL
Sbjct: 96 LVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 147
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 163 GTFRIASWRGT--QVAVKTLGEEVFT-----DEDKVKAFIDELALLQKIRHPNVVQFLGA 215
G ++A R T +VA+K + + F + D E+ +L+K+ HP +++ +
Sbjct: 23 GEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKN 81
Query: 216 VTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
+ IV E + G+L + LK + + + YLHEN IIHRD
Sbjct: 82 FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRD 138
Query: 276 LEPSNIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVY---KN 329
L+P N+L +++ +K+ DFG SK+L + ++ C + Y APEV
Sbjct: 139 LKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR----TLCGTPT--YLAPEVLVSVGT 192
Query: 330 EEYDTKVDVFSFALILQEMIEGCPPF 355
Y+ VD +S +IL + G PPF
Sbjct: 193 AGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKG 232
VA+K L F ++ K EL L++ + H N++ L T Q + Y+
Sbjct: 51 NVAIKKLSRP-FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 233 DLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNIL 282
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 110 LMDANLSQ--------VIQMELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIV 158
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFA 342
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 159 VKSDATLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 343 LILQEMIEGCPPFP 356
I+ EMI+G FP
Sbjct: 213 CIMGEMIKGGVLFP 226
>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo
Form)
pdb|3TWQ|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo
Form)
Length = 175
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKR--TALHVAACQGRTDVVRLLLSRGADVD 97
+L+ A GD++ +K+L + VN RDI+ R T LH AA R VV LL GADV
Sbjct: 15 QLLEAAKAGDVETVKKLC-TVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH 73
Query: 98 PEDRWGSTPLADAVYYKHHDVIKLLEEHGAKPSTA------PMHVQNAREVPEYEI 147
+D+ G PL +A Y H++V +LL +HGA + A P+H A+ +YEI
Sbjct: 74 AKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAK--GKYEI 127
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 56 LLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPL 107
L+ G VN D+ K T LH AA +G+ ++ +LLL GAD ++R G+TPL
Sbjct: 98 LVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 149
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 163 GTFRIASWRGT--QVAVKTLGEEVFT-----DEDKVKAFIDELALLQKIRHPNVVQFLGA 215
G ++A R T +VA+K + + F + D E+ +L+K+ HP +++ +
Sbjct: 30 GEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKN 88
Query: 216 VTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
+ IV E + G+L + LK + + + YLHEN IIHRD
Sbjct: 89 FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRD 145
Query: 276 LEPSNIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVY---KN 329
L+P N+L +++ +K+ DFG SK+L + ++ C + Y APEV
Sbjct: 146 LKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR----TLCGTPT--YLAPEVLVSVGT 199
Query: 330 EEYDTKVDVFSFALILQEMIEGCPPF 355
Y+ VD +S +IL + G PPF
Sbjct: 200 AGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKG 232
VA+K L F ++ K EL L++ + H N++ L T Q + Y+
Sbjct: 51 NVAIKKLSRP-FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 233 DLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNIL 282
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 110 LMDANLSQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 158
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFA 342
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 159 VKSDATLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 343 LILQEMIEGCPPFP 356
I+ EMI+G FP
Sbjct: 213 CIMGEMIKGGVLFP 226
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 30/198 (15%)
Query: 188 EDKVKAFIDELALLQKIRHPNVVQF-------------LGAVTQSTPMMIVTEYLPKGDL 234
E+K+ + E+ LL + H VV++ + AV + + + I EY G L
Sbjct: 43 EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL 102
Query: 235 RAYLKQKGALKPTLAV-KFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
+ + + + I ++Y+H + IIHRDL+P NI D+S ++K+ D
Sbjct: 103 YDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGD 159
Query: 294 FGLSK-------LLKF--ANTVKEDRPVTCEETSWRYAAPEVYKNE-EYDTKVDVFSFAL 343
FGL+K +LK N +T + Y A EV Y+ K+D++S +
Sbjct: 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGI 219
Query: 344 ILQEMIEGCPPFPTKQEK 361
I EMI PF T E+
Sbjct: 220 IFFEMIY---PFSTGMER 234
>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human 3bp2
pdb|3TWR|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human 3bp2
pdb|3TWR|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human 3bp2
pdb|3TWR|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human 3bp2
pdb|3TWS|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWS|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWS|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWS|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWT|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWT|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWT|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWT|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWV|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWV|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWV|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWV|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWW|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Lnpep (Chimeric Peptide)
pdb|3TWW|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Lnpep (Chimeric Peptide)
pdb|3TWX|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Fnbp1 (Chimeric Peptide)
pdb|3TWX|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Fnbp1 (Chimeric Peptide)
Length = 165
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKR--TALHVAACQGRTDVVRLLLSRGADVD 97
+L+ A GD++ +K+L + VN RDI+ R T LH AA R VV LL GADV
Sbjct: 11 QLLEAAKAGDVETVKKLC-TVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH 69
Query: 98 PEDRWGSTPLADAVYYKHHDVIKLLEEHGAKPSTA------PMHVQNAREVPEYEI 147
+D+ G PL +A Y H++V +LL +HGA + A P+H A+ +YEI
Sbjct: 70 AKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAK--GKYEI 123
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 56 LLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPL 107
L+ G VN D+ K T LH AA +G+ ++ +LLL GAD ++R G+TPL
Sbjct: 94 LVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 145
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 163 GTFRIASWRGT--QVAVKTLGEEVFT-----DEDKVKAFIDELALLQKIRHPNVVQFLGA 215
G ++A R T +VA+K + + F + D E+ +L+K+ HP +++ +
Sbjct: 24 GEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKN 82
Query: 216 VTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
+ IV E + G+L + LK + + + YLHEN IIHRD
Sbjct: 83 FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRD 139
Query: 276 LEPSNIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVY---KN 329
L+P N+L +++ +K+ DFG SK+L + ++ C + Y APEV
Sbjct: 140 LKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR----TLCGTPT--YLAPEVLVSVGT 193
Query: 330 EEYDTKVDVFSFALILQEMIEGCPPF 355
Y+ VD +S +IL + G PPF
Sbjct: 194 AGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKG 232
VA+K L F ++ K EL L++ + H N++ L T Q + Y+
Sbjct: 51 NVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 233 DLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNIL 282
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 110 LMDANLSQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 158
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFA 342
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 159 VKSDATLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 343 LILQEMIEGCPPFP 356
I+ EMI+G FP
Sbjct: 213 CIMGEMIKGGVLFP 226
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 32/229 (13%)
Query: 197 ELALLQKIRHPNVVQFLGA---------VTQSTP---MMIVTEYLPKGDLRAYLKQKGAL 244
E+ L K+ HP +V++ A + S+P + I + K +L+ ++ + +
Sbjct: 53 EVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTI 112
Query: 245 KP---TLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLL- 300
+ ++ + L IA + +LH + ++HRDL+PSNI +KV DFGL +
Sbjct: 113 EERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD 169
Query: 301 --KFANTVKEDRPVTCEET----SWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPP 354
+ TV P T + Y +PE Y KVD+FS LIL E++ P
Sbjct: 170 QDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---P 226
Query: 355 FPTKQEKEVPKAYIANER-PPFRAPTTHYAYGLRELIEDCWSEEPFRRP 402
F T+ E+ + N + PP Y +++D S P RP
Sbjct: 227 FSTQMERVRTLTDVRNLKFPPLFTQKYPCEY---VMVQDMLSPSPMERP 272
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A K + +D++ V+ E+ + +RHP +V A M+++ E++
Sbjct: 182 GNNFAAKFVMTPHESDKETVRK---EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG 238
Query: 232 GDL-RAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL--RDDSGH 288
G+L + + AV++ + +G+ ++HEN +H DL+P NI+ S
Sbjct: 239 GELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNE 295
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEM 348
LK+ DFGL+ L +VK VT + +AAPEV + + D++S ++ +
Sbjct: 296 LKLIDFGLTAHLDPKQSVK----VTT--GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 349
Query: 349 IEGCPPFPTKQEKEV 363
+ G PF + + E
Sbjct: 350 LSGLSPFGGENDDET 364
>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9U|D Chain D, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9N|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9N|D Chain D, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
Length = 158
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ A G D ++ L+ +G DVN D + T LH+AA G+ ++V +LL GADV+
Sbjct: 9 KLLEAAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNAS 68
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGAKPST------APMHV 136
D G TPL A Y H +++++L +HGA + P+H+
Sbjct: 69 DSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHL 111
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A G L+ ++ LL +G DVN D T LH+AA G ++V +LL GADV+ D
Sbjct: 43 LHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYD 102
Query: 101 RWGSTPLADAVYYKHHDVIKLLEEHGAKPSTAPMHVQNAREVPEYEI 147
R G TPL A +++++L +HGA ++ Q+A + ++I
Sbjct: 103 RAGWTPLHLAALSGQLEIVEVLLKHGAD-----VNAQDALGLTAFDI 144
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A +G L+ ++ LL G DVN D T LH+AA G+ ++V +LL GADV+ +D
Sbjct: 76 LHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQD 135
Query: 101 RWGSTPLADAVYYKHHDVIKLLE 123
G T ++ D+ ++L+
Sbjct: 136 ALGLTAFDISINQGQEDLAEILQ 158
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G A K + +D++ V+ E+ + +RHP +V A M+++ E++
Sbjct: 76 GNNFAAKFVMTPHESDKETVRK---EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG 132
Query: 232 GDL-RAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL--RDDSGH 288
G+L + + AV++ + +G+ ++HEN +H DL+P NI+ S
Sbjct: 133 GELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNE 189
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEM 348
LK+ DFGL+ L +VK VT + +AAPEV + + D++S ++ +
Sbjct: 190 LKLIDFGLTAHLDPKQSVK----VTT--GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 243
Query: 349 IEGCPPFPTKQEKEV 363
+ G PF + + E
Sbjct: 244 LSGLSPFGGENDDET 258
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 125/297 (42%), Gaps = 38/297 (12%)
Query: 129 PSTAPMHVQNAREVPEYEIDPKELDFSNSVEITKGTFRIASW-----RGTQVAVKTLGEE 183
P+T ++ Q A E E + D D E+ +G + + G AVK +
Sbjct: 15 PTTENLYFQGAXENFEVKAD----DLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRAT 70
Query: 184 VFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ--- 240
V + E K + D + + P V F GA+ + + I E L L + KQ
Sbjct: 71 VNSQEQK-RLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVID 128
Query: 241 KGALKPT-LAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKL 299
KG P + K A+ I + + +LH ++IHRD++PSN+L + G +K DFG+S
Sbjct: 129 KGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGY 186
Query: 300 LKFANTVKEDRPVTCEETSWRYAAPEVYKNE----EYDTKVDVFSFALILQEMIEGCPPF 355
L + V +D C+ Y APE E Y K D++S + E+ P+
Sbjct: 187 L--VDDVAKDIDAGCKP----YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPY 240
Query: 356 -----PTKQEKEVPKAYIANERPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
P +Q K+V E P + P ++ + C + RPT+ ++
Sbjct: 241 DSWGTPFQQLKQV------VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 163 GTFRIASWRGT--QVAVKTLGEEVFT-----DEDKVKAFIDELALLQKIRHPNVVQFLGA 215
G ++A R T +VA++ + + F + D E+ +L+K+ HP +++ +
Sbjct: 149 GEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKN 207
Query: 216 VTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
+ IV E + G+L + LK + + + YLHEN IIHRD
Sbjct: 208 FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRD 264
Query: 276 LEPSNIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVY---KN 329
L+P N+L +++ +K+ DFG SK+L + ++ C + Y APEV
Sbjct: 265 LKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR----TLCGTPT--YLAPEVLVSVGT 318
Query: 330 EEYDTKVDVFSFALILQEMIEGCPPF 355
Y+ VD +S +IL + G PPF
Sbjct: 319 AGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
pdb|4ATZ|E Chain E, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
pdb|4ATZ|F Chain F, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
Length = 154
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%)
Query: 38 RVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVD 97
R L A G L+ ++ LL +G DVN D + T LH+AA G ++V +LL GADV+
Sbjct: 36 RTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAASLGHLEIVEVLLKYGADVN 95
Query: 98 PEDRWGSTPLADAVYYKHHDVIKLLEEHGA 127
+D G TPL A Y+ H +++++L +HGA
Sbjct: 96 AKDATGITPLYLAAYWGHLEIVEVLLKHGA 125
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ A G D ++ L+ +G D N D RT LH+AA G ++V +LL GADV+
Sbjct: 5 KLLEAARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAV 64
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGA 127
D G+TPL A H +++++L ++GA
Sbjct: 65 DTNGTTPLHLAASLGHLEIVEVLLKYGA 92
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A+ G L+ ++ LL G DVN +D T L++AA G ++V +LL GADV+ +D
Sbjct: 72 LHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQD 131
Query: 101 RWGSTPLADAVYYKHHDVIKLLE 123
++G T ++ + D+ ++L+
Sbjct: 132 KFGKTAFDISIDIGNEDLAEILQ 154
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 121/274 (44%), Gaps = 34/274 (12%)
Query: 153 DFSNSVEITKGTFRIASW-----RGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHP 207
D +E+ +G + + G +AVK + V + E K + +D ++ + P
Sbjct: 52 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK-RLLMDLDISMRTVDCP 110
Query: 208 NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ---KGALKPT-LAVKFALDIARGMNYL 263
V F GA+ + + I E + L + KQ KG P + K A+ I + + +L
Sbjct: 111 FTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 169
Query: 264 HENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAA 323
H ++IHRD++PSN+L + G +K+ DFG+S L ++V + C+ Y A
Sbjct: 170 HSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTIDAGCKP----YMA 221
Query: 324 PEVYKNE----EYDTKVDVFSFALILQEMIEGCPPF-----PTKQEKEVPKAYIANERPP 374
PE E Y K D++S + + E+ P+ P +Q K+V E P
Sbjct: 222 PERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV------VEEPS 275
Query: 375 FRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQIL 408
+ P ++ + C + RPT+ +++
Sbjct: 276 PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 309
>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEH|B Chain B, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEH|C Chain C, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 157
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 54/84 (64%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A EG L+ ++ LL +G DVN +D D T LH+AA +G ++V +LL GADV+ +D
Sbjct: 72 LHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQD 131
Query: 101 RWGSTPLADAVYYKHHDVIKLLEE 124
++G TP A+ H D+ ++L++
Sbjct: 132 KFGKTPFDLAIREGHEDIAEVLQK 155
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A EG L+ ++ LL +G DVN +D D T LH+AA +G ++V +LL GADV+ +D
Sbjct: 39 LHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 98
Query: 101 RWGSTPLADAVYYKHHDVIKLLEEHGA 127
+ G TPL A H +++++L + GA
Sbjct: 99 KDGYTPLHLAAREGHLEIVEVLLKAGA 125
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 7/108 (6%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ A G D ++ L+ +G DVN +D D T LH+AA +G ++V +LL GADV+ +
Sbjct: 5 KLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAK 64
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGA------KPSTAPMHVQNARE 141
D+ G TPL A H +++++L + GA K P+H+ ARE
Sbjct: 65 DKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLA-ARE 111
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 19/179 (10%)
Query: 190 KVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYL-------KQKG 242
K F +EL ++ I++ + G +T + I+ EY+ + + K
Sbjct: 86 KYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYT 145
Query: 243 ALKPTLAVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLK 301
P +K + + +Y+H + I HRD++PSNIL D +G +K++DFG S+ +
Sbjct: 146 CFIPIQVIKCIIKSVLNSFSYIHNEK--NICHRDVKPSNILMDKNGRVKLSDFGESEYM- 202
Query: 302 FANTVKEDRPVTCEETSWRYAAPEVYKNE-EYD-TKVDVFSFALILQEMIEGCPPFPTK 358
D+ + ++ + PE + NE Y+ KVD++S + L M PF K
Sbjct: 203 ------VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 19/190 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEY--- 228
G +VA+K L F E K EL LL+ +RH NV+ L T + T++
Sbjct: 50 GAKVAIKKLYRP-FQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108
Query: 229 LP--KGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDS 286
+P DL +K + + + + +G+ Y+H IIHRDL+P N+ ++
Sbjct: 109 MPFMGTDLGKLMKHEKLGEDRIQF-LVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNED 164
Query: 287 GHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALIL 345
LK+ DFGL++ + D + + Y APEV N Y VD++S I+
Sbjct: 165 CELKILDFGLAR--------QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIM 216
Query: 346 QEMIEGCPPF 355
EMI G F
Sbjct: 217 AEMITGKTLF 226
>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein
Length = 166
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%)
Query: 36 DPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGAD 95
D L A+ G L+ ++ LL +G DVN D+ T LH+AA G ++V +LL GAD
Sbjct: 46 DGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAATGHLEIVEVLLKHGAD 105
Query: 96 VDPEDRWGSTPLADAVYYKHHDVIKLLEEHGA 127
V+ D G TPL A Y H +++++L +HGA
Sbjct: 106 VNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGA 137
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ A G D ++ L+ +G DVN D D T LH+AA G ++V +LL GADV+
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNAS 76
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGAKPST------APMHV 136
D G TPL A H +++++L +HGA + P+H+
Sbjct: 77 DLTGITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHL 119
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A G L+ ++ LL G DVN D D T LH+AA G ++V +LL GADV+ +D
Sbjct: 84 LHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVNAQD 143
Query: 101 RWGSTPLADAVYYKHHDVIKLLE 123
++G T ++ + D+ ++L+
Sbjct: 144 KFGKTAFDISIDNGNEDLAEILQ 166
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 163 GTFRIASWRGT--QVAVKTLGEEVFT-----DEDKVKAFIDELALLQKIRHPNVVQFLGA 215
G ++A R T +VA++ + + F + D E+ +L+K+ HP +++ +
Sbjct: 163 GEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKN 221
Query: 216 VTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRD 275
+ IV E + G+L + LK + + + YLHEN IIHRD
Sbjct: 222 FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRD 278
Query: 276 LEPSNIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVY---KN 329
L+P N+L +++ +K+ DFG SK+L + ++ C + Y APEV
Sbjct: 279 LKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR----TLCGTPT--YLAPEVLVSVGT 332
Query: 330 EEYDTKVDVFSFALILQEMIEGCPPF 355
Y+ VD +S +IL + G PPF
Sbjct: 333 AGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEYL-PKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E + P DL ++ ++GAL+ LA F
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF 120
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 121 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 173
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 174 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 226
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 227 ---FRQRVSSEC---QHLIRWCLALRPSDRPTFEEI 256
>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s
pdb|2XZT|H Chain H, Caspase-3 In Complex With Darpin-3.4_i78s
Length = 136
Score = 66.6 bits (161), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ G D ++ L+ +G DVN D T LH+AA +G ++V +LL GADV+
Sbjct: 17 KLLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNAS 76
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGA 127
D WG TPL A H +++++L E+GA
Sbjct: 77 DSWGRTPLHLAATVGHLEIVEVLLEYGA 104
Score = 55.5 bits (132), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 49/84 (58%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A G L+ ++ LL G DVN D RT LH+AA G ++V +LL GADV+ +D
Sbjct: 51 LHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAATVGHLEIVEVLLEYGADVNAQD 110
Query: 101 RWGSTPLADAVYYKHHDVIKLLEE 124
++G T ++ + D+ ++L++
Sbjct: 111 KFGKTAFDISIDNGNEDLAEILQK 134
Score = 30.0 bits (66), Expect = 2.7, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 38 RVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLL 89
R L A G L+ ++ LL+ G DVN +D +TA ++ G D+ +L
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 15/201 (7%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPK 231
G ++A K + D+++VK +E++++ ++ H N++Q A +++V EY+
Sbjct: 114 GLKLAAKIIKTRGMKDKEEVK---NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170
Query: 232 GDL-RAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL--RDDSGH 288
G+L + + L + F I G+ ++H+ I+H DL+P NIL D+
Sbjct: 171 GELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQ 227
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEM 348
+K+ DFGL++ K +K + + APEV + D++S +I +
Sbjct: 228 IKIIDFGLARRYKPREKLKVNFGTP------EFLAPEVVNYDFVSFPTDMWSVGVIAYML 281
Query: 349 IEGCPPFPTKQEKEVPKAYIA 369
+ G PF + E +A
Sbjct: 282 LSGLSPFLGDNDAETLNNILA 302
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKG 232
VA+K L F ++ K EL L++ + H N++ L T Q + Y+
Sbjct: 51 NVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 233 DLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNIL 282
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 110 LMDANLSQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 158
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFA 342
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 159 VKSDCTLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 343 LILQEMIEGCPPFP 356
I+ EMI+G FP
Sbjct: 213 CIMGEMIKGGVLFP 226
>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Maltose Binding Protein
Length = 169
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ A G D ++ L+ +G DVN D T LH+AA G ++V +LL GADVD
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDAS 76
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGA------KPSTAPMHV 136
D +G TPL A Y+ H +++++L ++GA P+H+
Sbjct: 77 DVFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHL 119
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A G L+ ++ LL G DV+ D+ T LH+AA G ++V +LL GADV+ D
Sbjct: 51 LHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMD 110
Query: 101 RWGSTPLADAVYYKHHDVIKLLEEHGA 127
G TPL A + + +++++L +HGA
Sbjct: 111 SDGMTPLHLAAKWGYLEIVEVLLKHGA 137
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 48 GDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPL 107
G L+ ++ LL +G DVN D D T LH+AA G ++V +LL GADV+ +D++G T
Sbjct: 91 GHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTAF 150
Query: 108 ADAVYYKHHDVIKLLEE 124
++ + D+ ++L++
Sbjct: 151 DISIDNGNEDLAEILQK 167
>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4
pdb|2XZD|H Chain H, Caspase-3 In Complex With An Inhibitory Darpin-3.4
Length = 136
Score = 66.2 bits (160), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ G D ++ L+ +G DVN D T LH+AA +G ++V +LL GADV+
Sbjct: 17 KLLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNAS 76
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGA 127
D WG TPL A H +++++L E+GA
Sbjct: 77 DIWGRTPLHLAATVGHLEIVEVLLEYGA 104
Score = 58.5 bits (140), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A G L+ ++ LL G DVN DI RT LH+AA G ++V +LL GADV+ +D
Sbjct: 51 LHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQD 110
Query: 101 RWGSTPLADAVYYKHHDVIKLLEE 124
++G T ++ + D+ ++L++
Sbjct: 111 KFGKTAFDISIDNGNEDLAEILQK 134
Score = 30.4 bits (67), Expect = 2.4, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 38 RVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLL 89
R L A G L+ ++ LL+ G DVN +D +TA ++ G D+ +L
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r
pdb|2Y0B|H Chain H, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r
Length = 136
Score = 65.9 bits (159), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ G D ++ L+ +G DVN D T LH+AA +G ++V +LL GADV+
Sbjct: 17 KLLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNAR 76
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGA 127
D WG TPL A H +++++L E+GA
Sbjct: 77 DIWGRTPLHLAATVGHLEIVEVLLEYGA 104
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A G L+ ++ LL G DVN RDI RT LH+AA G ++V +LL GADV+ +D
Sbjct: 51 LHLAAKRGHLEIVEVLLKHGADVNARDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQD 110
Query: 101 RWGSTPLADAVYYKHHDVIKLLEE 124
++G T ++ + D+ ++L++
Sbjct: 111 KFGKTAFDISIDNGNEDLAEILQK 134
Score = 30.0 bits (66), Expect = 2.6, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 38 RVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLL 89
R L A G L+ ++ LL+ G DVN +D +TA ++ G D+ +L
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKG 232
VA+K L F ++ K EL L++ + H N++ L T Q + Y+
Sbjct: 51 NVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 233 DLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNIL 282
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 110 LMDANLCQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 158
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFA 342
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 159 VKSDCTLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 343 LILQEMIEGCPPFP 356
I+ EMI+G FP
Sbjct: 213 CIMGEMIKGGVLFP 226
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKG 232
VA+K L F ++ K EL L++ + H N++ L T Q + Y+
Sbjct: 52 NVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 110
Query: 233 DLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNIL 282
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 111 LMDANLCQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 159
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFA 342
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 160 VKSDCTLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 343 LILQEMIEGCPPFP 356
I+ EMI+G FP
Sbjct: 214 CIMGEMIKGGVLFP 227
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKG 232
VA+K L F ++ K EL L++ + H N++ L T Q + Y+
Sbjct: 51 NVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 233 DLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNIL 282
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 110 LMDANLCQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 158
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFA 342
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 159 VKSDCTLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 343 LILQEMIEGCPPFP 356
I+ EMI+G FP
Sbjct: 213 CIMGEMIKGGVLFP 226
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKG 232
VA+K L F ++ K EL L++ + H N++ L T Q T YL
Sbjct: 51 NVAIKKLSRP-FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 233 DLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNIL 282
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 110 LMDANLXQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 158
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFA 342
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 159 VKSDXTLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 343 LILQEMIEGCPPFPTK 358
I+ EM+ FP +
Sbjct: 213 CIMGEMVRHKILFPGR 228
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 18/205 (8%)
Query: 159 EITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
E+ KG F + G + A K + + + D + E + +K++HPN+V+
Sbjct: 36 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLH 94
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIH 273
++ + + +V + + G+L + + A I + Y H N I+H
Sbjct: 95 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVH 151
Query: 274 RDLEPSNIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNE 330
R+L+P N+L + +K+ADFGL A V + + Y +PEV K +
Sbjct: 152 RNLKPENLLLASKAKGAAVKLADFGL------AIEVNDSEAWHGFAGTPGYLSPEVLKKD 205
Query: 331 EYDTKVDVFSFALILQEMIEGCPPF 355
Y VD+++ +IL ++ G PPF
Sbjct: 206 PYSKPVDIWACGVILYILLVGYPPF 230
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 80/187 (42%), Gaps = 13/187 (6%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKGD 233
VA+K L F ++ K EL L++ + H N++ L T Q T YL
Sbjct: 52 VAIKKLSRP-FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 234 LRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
+ A L Q + L + G+ +LH IIHRDL+PSNI+ LK+
Sbjct: 111 MDANLXQVIQMELDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKI 167
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFGL A T +T + Y APEV Y VD++S I+ EM+
Sbjct: 168 LDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 352 CPPFPTK 358
FP +
Sbjct: 222 KILFPGR 228
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 18/205 (8%)
Query: 159 EITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
E+ KG F + G + A K + + + D + E + +K++HPN+V+
Sbjct: 12 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLH 70
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIH 273
++ + + +V + + G+L + + A I + Y H N I+H
Sbjct: 71 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVH 127
Query: 274 RDLEPSNIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNE 330
R+L+P N+L + +K+ADFGL A V + + Y +PEV K +
Sbjct: 128 RNLKPENLLLASKAKGAAVKLADFGL------AIEVNDSEAWHGFAGTPGYLSPEVLKKD 181
Query: 331 EYDTKVDVFSFALILQEMIEGCPPF 355
Y VD+++ +IL ++ G PPF
Sbjct: 182 PYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 18/205 (8%)
Query: 159 EITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
E+ KG F + G + A K + + + D + E + +K++HPN+V+
Sbjct: 13 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLH 71
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIH 273
++ + + +V + + G+L + + A I + Y H N I+H
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVH 128
Query: 274 RDLEPSNIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNE 330
R+L+P N+L + +K+ADFGL A V + + Y +PEV K +
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGL------AIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 331 EYDTKVDVFSFALILQEMIEGCPPF 355
Y VD+++ +IL ++ G PPF
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 18/205 (8%)
Query: 159 EITKGTFRIA-----SWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
E+ KG F + G + A K + + + D + E + +K++HPN+V+
Sbjct: 13 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLH 71
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIH 273
++ + + +V + + G+L + + A I + Y H N I+H
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVH 128
Query: 274 RDLEPSNIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNE 330
R+L+P N+L + +K+ADFGL A V + + Y +PEV K +
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGL------AIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 331 EYDTKVDVFSFALILQEMIEGCPPF 355
Y VD+++ +IL ++ G PPF
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 16/191 (8%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTE-YLP 230
G +VA+K L F E K EL LL+ ++H NV+ L T ++ + + YL
Sbjct: 49 GEKVAIKKLSRP-FQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 107
Query: 231 KGDLRAYLKQKGALKPTL-AVKFAL-DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH 288
++ L++ LK + +++ + + +G+ Y+H ++HRDL+P N+ ++
Sbjct: 108 MPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCE 164
Query: 289 LKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALILQE 347
LK+ DFGL++ D +T + Y APEV + Y+ VD++S I+ E
Sbjct: 165 LKILDFGLAR--------HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAE 216
Query: 348 MIEGCPPFPTK 358
M+ G F K
Sbjct: 217 MLTGKTLFKGK 227
>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex
pdb|2V4H|D Chain D, Nemo Cc2-Lz Domain - 1d5 Darpin Complex
Length = 136
Score = 64.7 bits (156), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ A G D ++ L+ +G DVN D T LH+AA ++V +LL GADV+
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAH 76
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGA 127
D GSTPL A + H +++++L +HGA
Sbjct: 77 DNDGSTPLHLAALFGHLEIVEVLLKHGA 104
Score = 53.9 bits (128), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 42 MYMANEGD-LDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
+++A + D L+ ++ LL G DVN D D T LH+AA G ++V +LL GADV+ +D
Sbjct: 51 LHLAADYDHLEIVEVLLKHGADVNAHDNDGSTPLHLAALFGHLEIVEVLLKHGADVNAQD 110
Query: 101 RWGSTPLADAVYYKHHDVIKLLEE 124
++G T ++ + D+ ++L++
Sbjct: 111 KFGKTAFDISIDNGNEDLAEILQK 134
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEY-LPKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 117 WQVLEAVRHCHNX---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 169
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 170 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 222
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 223 ---FRQRVSXEC---QHLIRWCLALRPSDRPTFEEI 252
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEY-LPKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 120
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 121 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 173
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 174 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 226
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 227 ---FRQRVSSEC---QHLIRWCLALRPSDRPTFEEI 256
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 84/193 (43%), Gaps = 29/193 (15%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKGD 233
VA+K L F ++ K EL L++ + H N++ L T Q + Y+
Sbjct: 54 VAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 112
Query: 234 LRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNILR 283
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 113 MDANLCQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVV 161
Query: 284 DDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
LK+ DFGL++ A T P + Y APEV Y VD++S
Sbjct: 162 KSDCTLKILDFGLART---AGTSFMMVPFV---VTRYYRAPEVILGMGYKENVDIWSVGC 215
Query: 344 ILQEMIEGCPPFP 356
I+ EMI+G FP
Sbjct: 216 IMGEMIKGGVLFP 228
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEY-LPKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 117 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 169
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 170 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 222
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 223 ---FRQRVSSEC---QHLIRWCLALRPSDRPTFEEI 252
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEY-LPKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 60 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 119
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 120 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 172
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 173 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 225
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 226 ---FRQRVSSEC---QHLIRWCLALRPSDRPTFEEI 255
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKG 232
VA+K L F ++ K EL L++ + H N++ L T Q T YL
Sbjct: 51 NVAIKKLSRP-FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 233 DLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNIL 282
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 110 LMDANLCQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 158
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFA 342
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 159 VKSDXTLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 343 LILQEMIEGCPPFPTK 358
I+ EM+ FP +
Sbjct: 213 CIMGEMVRHKILFPGR 228
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 80/187 (42%), Gaps = 13/187 (6%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKGD 233
VA+K L F ++ K EL L++ + H N++ L T Q T YL
Sbjct: 52 VAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 234 LRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
+ A L Q + L + G+ +LH IIHRDL+PSNI+ LK+
Sbjct: 111 MDANLXQVIQMELDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKI 167
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFGL A T +T + Y APEV Y VD++S I+ EM+
Sbjct: 168 LDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 352 CPPFPTK 358
FP +
Sbjct: 222 KILFPGR 228
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEYL-PKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 137 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 189
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 190 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 242
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 243 ---FRQRVSXEC---QHLIRWCLALRPXDRPTFEEI 272
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 11/117 (9%)
Query: 197 ELALLQKIRHPNVVQFLGAVTQSTP--MMIVTEYLPKGDLRAYLKQKGALKPTLAVKFAL 254
E+A+L+K+ HPNVV+ + + + +V E + +G + K L A +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-PLSEDQARFYFQ 144
Query: 255 DIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSKLLK-----FANTV 306
D+ +G+ YLH + IIHRD++PSN+L + GH+K+ADFG+S K +NTV
Sbjct: 145 DLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV 198
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 163 GTFRIASWRGTQV--AVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST 220
G +IA +GT++ A K + + D D+ K E+ +++ + HPN+++ +T
Sbjct: 23 GEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK---QEIEIMKSLDHPNIIRLYETFEDNT 79
Query: 221 PMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSN 280
+ +V E G+L + K + + A + D+ + Y H+ + HRDL+P N
Sbjct: 80 DIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPEN 136
Query: 281 IL-RDDS--GHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVD 337
L DS LK+ DFGL+ K ++ T T + Y +P+V + Y + D
Sbjct: 137 FLFLTDSPDSPLKLIDFGLAARFKPGKMMR-----TKVGTPY-YVSPQVLEG-LYGPECD 189
Query: 338 VFSFALILQEMIEGCPPFPTKQEKEV 363
+S +++ ++ G PPF + EV
Sbjct: 190 EWSAGVMMYVLLCGYPPFSAPTDXEV 215
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEY-LPKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 122 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 174
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 175 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 227
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 228 ---FRQRVSSEC---QHLIRWCLALRPSDRPTFEEI 257
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEY-LPKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 122 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 174
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 175 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 227
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 228 ---FRQRVSSEC---QHLIRWCLALRPSDRPTFEEI 257
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 163 GTFRIASWRGTQV--AVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQST 220
G +IA +GT++ A K + + D D+ K E+ +++ + HPN+++ +T
Sbjct: 40 GEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK---QEIEIMKSLDHPNIIRLYETFEDNT 96
Query: 221 PMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSN 280
+ +V E G+L + K + + A + D+ + Y H+ + HRDL+P N
Sbjct: 97 DIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPEN 153
Query: 281 IL-RDDS--GHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVD 337
L DS LK+ DFGL+ K ++ T T + Y +P+V + Y + D
Sbjct: 154 FLFLTDSPDSPLKLIDFGLAARFKPGKMMR-----TKVGTPY-YVSPQVLEG-LYGPECD 206
Query: 338 VFSFALILQEMIEGCPPFPTKQEKEV 363
+S +++ ++ G PPF + EV
Sbjct: 207 EWSAGVMMYVLLCGYPPFSAPTDXEV 232
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEYL-PKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 137 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 189
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 190 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 242
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 243 ---FRQRVSXEC---QHLIRWCLALRPSDRPTFEEI 272
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEY-LPKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 122 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 174
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 175 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 227
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 228 ---FRQRVSSEC---QHLIRWCLALRPSDRPTFEEI 257
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEY-LPKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 143
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 144 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 196
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 197 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 249
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 250 ---FRQRVSXEC---QHLIRWCLALRPSDRPTFEEI 279
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 15/139 (10%)
Query: 222 MMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPS 279
++I+ E + G+L + ++++G A A + DI + +LH + I HRD++P
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPE 157
Query: 280 NIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKV 336
N+L ++ LK+ DFG +K T + C + Y APEV E+YD
Sbjct: 158 NLLYTSKEKDAVLKLTDFGFAK-----ETTQNALQTPC--YTPYYVAPEVLGPEKYDKSC 210
Query: 337 DVFSFALILQEMIEGCPPF 355
D++S +I+ ++ G PPF
Sbjct: 211 DMWSLGVIMYILLCGFPPF 229
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEYL-PKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 137 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 189
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 190 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 242
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 243 ---FRQRVSSEC---QHLIRWCLALRPSDRPTFEEI 272
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 24/204 (11%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQF--------------LGAVTQS 219
+VA+K + V TD VK + E+ +++++ H N+V+ +G++T+
Sbjct: 38 RVAIKKI---VLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTEL 94
Query: 220 TPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPS 279
+ IV EY+ + DL L+Q G L A F + RG+ Y+H ++HRDL+P+
Sbjct: 95 NSVYIVQEYM-ETDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPA 149
Query: 280 NI-LRDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDV 338
N+ + + LK+ DFGL++++ + + T W + + Y +D+
Sbjct: 150 NLFINTEDLVLKIGDFGLARIMD-PHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDM 208
Query: 339 FSFALILQEMIEGCPPFPTKQEKE 362
++ I EM+ G F E E
Sbjct: 209 WAAGCIFAEMLTGKTLFAGAHELE 232
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEYL-PKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 135
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 136 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 188
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 189 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 241
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 242 ---FRQRVSSEC---QHLIRWCLALRPSDRPTFEEI 271
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEYL-PKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 96 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 155
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 156 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 208
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 209 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 261
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 262 ---FRQRVSSEC---QHLIRWCLALRPSDRPTFEEI 291
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 80/187 (42%), Gaps = 13/187 (6%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKGD 233
VA+K L F ++ K EL L++ + H N++ L T Q T YL
Sbjct: 45 VAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 103
Query: 234 LRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKV 291
+ A L Q + L + G+ +LH IIHRDL+PSNI+ LK+
Sbjct: 104 MDANLXQVIQMELDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKI 160
Query: 292 ADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEG 351
DFGL A T +T + Y APEV Y VD++S I+ EM+
Sbjct: 161 LDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 214
Query: 352 CPPFPTK 358
FP +
Sbjct: 215 KILFPGR 221
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEY-LPKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 117 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 169
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ G PF +E I
Sbjct: 170 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------IIGG 219
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
+ FR + + LI C + P RPTF +I
Sbjct: 220 QVFFRQRVSSEC---QHLIRWCLALRPSDRPTFEEI 252
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEY-LPKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 149 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 201
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 202 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 254
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 255 ---FRQRVSSEC---QHLIRWCLALRPSDRPTFEEI 284
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 15/139 (10%)
Query: 222 MMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPS 279
++I+ E + G+L + ++++G A A + DI + +LH + I HRD++P
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPE 138
Query: 280 NIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKV 336
N+L ++ LK+ DFG +K T + C + Y APEV E+YD
Sbjct: 139 NLLYTSKEKDAVLKLTDFGFAK-----ETTQNALQTPC--YTPYYVAPEVLGPEKYDKSC 191
Query: 337 DVFSFALILQEMIEGCPPF 355
D++S +I+ ++ G PPF
Sbjct: 192 DMWSLGVIMYILLCGFPPF 210
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEYL-PKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 135
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 136 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 188
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 189 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 241
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 242 ---FRQRVSXEC---QHLIRWCLALRPSDRPTFEEI 271
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEY-LPKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 164 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 216
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 217 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 269
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 270 ---FRQRVSSEC---QHLIRWCLALRPSDRPTFEEI 299
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEYL-PKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 109 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 168
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 169 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 221
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 222 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 274
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 275 ---FRQRVSXEC---QHLIRWCLALRPSDRPTFEEI 304
>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By
Darpin Inhibitors
pdb|2J8S|E Chain E, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By
Darpin Inhibitors
pdb|4DX5|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX5|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX6|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX6|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX7|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX7|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
Length = 169
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ A G D ++ L+ +G DVN D+ T LH+AA G ++V +LL GADV+
Sbjct: 17 KLLEAARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAY 76
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGAKPST------APMHVQNAR 140
D GSTPL A ++ H +++++L ++GA + P+H+ R
Sbjct: 77 DTLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANR 123
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 48 GDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPL 107
G L+ ++ LL +G DVN D T LH+AA G ++V +LL GADV+ +D G TPL
Sbjct: 58 GHLEIVEVLLKNGADVNAYDTLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPL 117
Query: 108 ADAVYYKHHDVIKLLEEHGA 127
A H +++++L ++GA
Sbjct: 118 HLAANRGHLEIVEVLLKYGA 137
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 53/84 (63%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A+ G L+ ++ LL +G DVN +D + T LH+AA +G ++V +LL GADV+ +D
Sbjct: 84 LHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVNAQD 143
Query: 101 RWGSTPLADAVYYKHHDVIKLLEE 124
++G T ++ + D+ ++L++
Sbjct: 144 KFGKTAFDISINNGNEDLAEILQK 167
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 30/198 (15%)
Query: 188 EDKVKAFIDELALLQKIRHPNVVQF-------------LGAVTQSTPMMIVTEYLPKGDL 234
E+K+ + E+ LL + H VV++ + AV + + + I EY L
Sbjct: 43 EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL 102
Query: 235 RAYLKQKGALKPTLAV-KFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVAD 293
+ + + + I ++Y+H + IIHRDL+P NI D+S ++K+ D
Sbjct: 103 YDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGD 159
Query: 294 FGLSK-------LLKF--ANTVKEDRPVTCEETSWRYAAPEVYKNE-EYDTKVDVFSFAL 343
FGL+K +LK N +T + Y A EV Y+ K+D++S +
Sbjct: 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGI 219
Query: 344 ILQEMIEGCPPFPTKQEK 361
I EMI PF T E+
Sbjct: 220 IFFEMIY---PFSTGMER 234
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEYL-PKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 164 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 216
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 217 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 269
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 270 ---FRQRVSXEC---QHLIRWCLALRPSDRPTFEEI 299
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKG 232
VA+K L F ++ K EL L++ + H N++ L T Q T YL
Sbjct: 52 NVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 110
Query: 233 DLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNIL 282
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 111 LMDANLCQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 159
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFA 342
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 160 VKSDCTLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 343 LILQEMIEGCPPFPTK 358
I+ EM+ FP +
Sbjct: 214 CIMGEMVRHKILFPGR 229
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEY-LPKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 164 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 216
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ C P + ++E+ + +
Sbjct: 217 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVF-- 269
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
FR + + LI C + P RPTF +I
Sbjct: 270 ---FRQRVSSEC---QHLIRWCLALRPSDRPTFEEI 299
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 20/193 (10%)
Query: 172 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEY--- 228
G +VA+K L F E K EL LL+ ++H NV+ L T ++ + ++
Sbjct: 67 GEKVAIKKLSRP-FQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 125
Query: 229 LP--KGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDS 286
+P + DL+ + + + + + + + +G+ Y+H ++HRDL+P N+ ++
Sbjct: 126 MPFMQTDLQKIMGMEFSEEKIQYLVYQM--LKGLKYIHS---AGVVHRDLKPGNLAVNED 180
Query: 287 GHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKN-EEYDTKVDVFSFALIL 345
LK+ DFGL++ D +T + Y APEV + Y+ VD++S I+
Sbjct: 181 CELKILDFGLAR--------HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIM 232
Query: 346 QEMIEGCPPFPTK 358
EM+ G F K
Sbjct: 233 AEMLTGKTLFKGK 245
>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1)
pdb|3B7B|B Chain B, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1)
pdb|3B95|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 2)
pdb|3B95|B Chain B, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 2)
Length = 237
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 36 DPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRG-A 94
D R LM A L+ +K L+ +G V+ +D + T LH+AA +G +VV+ LLS G
Sbjct: 43 DQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQM 102
Query: 95 DVDPEDRWGSTPLADAVYYKHHDVIKLLEEHGA 127
DV+ +D G TP+ A YKH D++KLL G+
Sbjct: 103 DVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGS 135
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 50 LDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPLAD 109
+D +K LL G+D+N RD ++ LH AA G D+ +LL+ D+ + G +PL
Sbjct: 124 VDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHI 183
Query: 110 AVYYKHHDVIKLL 122
A +D + L
Sbjct: 184 AARENRYDCVVLF 196
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 36 DPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGAD 95
+ R L A G +D L+ +G +++ D+RT L AA + V+ L+ GA
Sbjct: 10 NKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL 69
Query: 96 VDPEDRWGSTPLADAVYYKHHDVIKLLEEHG 126
VDP+D GST L A H++V++ L +G
Sbjct: 70 VDPKDAEGSTCLHLAAKKGHYEVVQYLLSNG 100
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 36 DPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGAD 95
+ + L + A G +D + LL + D++ +I + LH+AA + R D V L LSR +D
Sbjct: 143 EENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSD 202
Query: 96 VDPEDRWGSTPL 107
V +++ G TPL
Sbjct: 203 VTLKNKEGETPL 214
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 69 DKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPLADAVYYKHHDVIKLLEEHGA 127
+KR+ LH AA G D+ +L+ GA++D TPL +A H + +K L + GA
Sbjct: 10 NKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGA 68
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKG 232
VA+K L F ++ K EL L++ + H N++ L T Q T YL
Sbjct: 51 NVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 233 DLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNIL 282
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 110 LMDANLCQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 158
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFA 342
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 159 VKSDCTLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 343 LILQEMIEGCPPFPTK 358
I+ EM+ FP +
Sbjct: 213 CIMGEMVRHKILFPGR 228
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKG 232
VA+K L F ++ K EL L++ + H N++ L T Q T YL
Sbjct: 89 NVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147
Query: 233 DLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNIL 282
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 148 LMDANLCQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 196
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFA 342
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 197 VKSDCTLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250
Query: 343 LILQEMIEGCPPFPTK 358
I+ EM+ FP +
Sbjct: 251 CIMGEMVRHKILFPGR 266
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEY-LPKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 150 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 202
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ G PF +E I
Sbjct: 203 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------IIGG 252
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
+ FR + + LI C + P RPTF +I
Sbjct: 253 QVFFRQRVSSEC---QHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEY-LPKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 149 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 201
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ G PF +E I
Sbjct: 202 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------IIGG 251
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
+ FR + + LI C + P RPTF +I
Sbjct: 252 QVFFRQRVSSEC---QHLIRWCLALRPSDRPTFEEI 284
>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|B Chain B, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|C Chain C, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|D Chain D, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 157
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 7/108 (6%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ A G D ++ L+ +G DVN +D D T LH+AA +G ++V +LL GADV+ +
Sbjct: 5 KLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAK 64
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGA------KPSTAPMHVQNARE 141
D+ G TPL A H +++++L + GA K P+H+ ARE
Sbjct: 65 DKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLA-ARE 111
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A EG L+ ++ LL +G DVN +D D T LH+AA +G ++V +LL GADV+ +D
Sbjct: 72 LHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQD 131
Query: 101 RWGSTPLADAVYYKHHDVIKLLEE 124
++G TP A+ + D+ ++L++
Sbjct: 132 KFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A EG L+ ++ LL +G DVN +D D T LH+AA +G ++V +LL GADV+ +D
Sbjct: 39 LHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 98
Query: 101 RWGSTPLADAVYYKHHDVIKLLEEHGA 127
+ G TPL A H +++++L + GA
Sbjct: 99 KDGYTPLHLAAREGHLEIVEVLLKAGA 125
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKG 232
VA+K L F ++ K EL L++ + H N++ L T Q T YL
Sbjct: 52 NVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 110
Query: 233 DLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNIL 282
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 111 LMDANLCQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 159
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFA 342
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 160 VKSDCTLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 343 LILQEMIEGCPPFPTK 358
I+ EM+ FP +
Sbjct: 214 CIMGEMVRHKILFPGR 229
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEY-LPKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 150 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 202
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ G PF +E I
Sbjct: 203 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------IIGG 252
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
+ FR + + LI C + P RPTF +I
Sbjct: 253 QVFFRQRVSSEC---QHLIRWCLALRPSDRPTFEEI 285
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEY-LPKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 150 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 202
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ G PF +E I
Sbjct: 203 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------IIGG 252
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
+ FR + + LI C + P RPTF +I
Sbjct: 253 QVFFRQRVSXEC---QHLIRWCLALRPSDRPTFEEI 285
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 82/195 (42%), Gaps = 29/195 (14%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKGD 233
VA+K L F ++ K EL L++ + H N++ L T Q T YL
Sbjct: 52 VAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 234 LRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNILR 283
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 111 MDANLCQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVV 159
Query: 284 DDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 160 KSDCTLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 344 ILQEMIEGCPPFPTK 358
I+ EM+ FP +
Sbjct: 214 IMGEMVRHKILFPGR 228
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 82/195 (42%), Gaps = 29/195 (14%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKGD 233
VA+K L F ++ K EL L++ + H N++ L T Q T YL
Sbjct: 51 VAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 109
Query: 234 LRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNILR 283
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 110 MDANLCQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVV 158
Query: 284 DDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 159 KSDCTLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 212
Query: 344 ILQEMIEGCPPFPTK 358
I+ EM+ FP +
Sbjct: 213 IMGEMVRHKILFPGR 227
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEY-LPKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 149 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 201
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ G PF +E I
Sbjct: 202 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------IIGG 251
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
+ FR + + LI C + P RPTF +I
Sbjct: 252 QVFFRQRVSXEC---QHLIRWCLALRPSDRPTFEEI 284
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEYL-PKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 149 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 201
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ G PF +E I
Sbjct: 202 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------IIGG 251
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
+ FR + + LI C + P RPTF +I
Sbjct: 252 QVFFRQRVSSEC---QHLIRWCLALRPSDRPTFEEI 284
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 174 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKG 232
VA+K L F ++ K EL L++ + H N++ L T Q T YL
Sbjct: 89 NVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147
Query: 233 DLRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNIL 282
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 148 LMDANLCQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 196
Query: 283 RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFA 342
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 197 VKSDCTLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250
Query: 343 LILQEMIEGCPPFPTK 358
I+ EM+ FP +
Sbjct: 251 CIMGEMVRHKILFPGR 266
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 197 ELALLQKIR--HPNVVQFLGAVTQSTPMMIVTEYL-PKGDLRAYLKQKGALKPTLAVKFA 253
E+ LL+K+ V++ L + +++ E P DL ++ ++GAL+ LA F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 254 LDIARGMNYLHENRPEAIIHRDLEPSNILRD-DSGHLKVADFGLSKLLKFANTVKEDRPV 312
+ + + H ++HRD++ NIL D + G LK+ DFG LLK +TV D
Sbjct: 150 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF-- 202
Query: 313 TCEETSWRYAAPEVYKNEEYDTK-VDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE 371
+ + Y+ PE + Y + V+S ++L +M+ G PF +E I
Sbjct: 203 ---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------IIGG 252
Query: 372 RPPFRAPTTHYAYGLRELIEDCWSEEPFRRPTFRQI 407
+ FR + + LI C + P RPTF +I
Sbjct: 253 QVFFRQRVSXEC---QHLIRWCLALRPSDRPTFEEI 285
>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin
Length = 166
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 7/108 (6%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ A G D ++ L+ +G DVN +D D T LH+AA +G ++V +LL GADV+ +
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAK 76
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGA------KPSTAPMHVQNARE 141
D+ G TPL A H +++++L + GA K P+H+ ARE
Sbjct: 77 DKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLA-ARE 123
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A EG L+ ++ LL +G DVN +D D T LH+AA +G ++V +LL GADV+ +D
Sbjct: 51 LHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 110
Query: 101 RWGSTPLADAVYYKHHDVIKLLEEHGA 127
+ G TPL A H +++++L + GA
Sbjct: 111 KDGYTPLHLAAREGHLEIVEVLLKAGA 137
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 52/83 (62%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A EG L+ ++ LL +G DVN +D D T LH+AA +G ++V +LL GADV+ +D
Sbjct: 84 LHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQD 143
Query: 101 RWGSTPLADAVYYKHHDVIKLLE 123
++G T ++ + D+ ++L+
Sbjct: 144 KFGKTAFDISIDNGNEDLAEILQ 166
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 82/195 (42%), Gaps = 29/195 (14%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKGD 233
VA+K L F ++ K EL L++ + H N++ L T Q T YL
Sbjct: 45 VAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 103
Query: 234 LRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNILR 283
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 104 MDANLCQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVV 152
Query: 284 DDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 153 KSDCTLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 206
Query: 344 ILQEMIEGCPPFPTK 358
I+ EM+ FP +
Sbjct: 207 IMGEMVRHKILFPGR 221
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 82/195 (42%), Gaps = 29/195 (14%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKGD 233
VA+K L F ++ K EL L++ + H N++ L T Q T YL
Sbjct: 46 VAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 104
Query: 234 LRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNILR 283
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 105 MDANLCQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVV 153
Query: 284 DDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 154 KSDCTLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 207
Query: 344 ILQEMIEGCPPFPTK 358
I+ EM+ FP +
Sbjct: 208 IMGEMVRHKILFPGR 222
>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 169
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 53 IKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPLADAVY 112
++ LL G DVN RD D T LH+AA G ++V +LL GADV+ +D +G TPL A
Sbjct: 63 VEVLLKHGADVNARDTDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAAD 122
Query: 113 YKHHDVIKLLEEHGA 127
H +++++L +HGA
Sbjct: 123 RGHLEIVEVLLKHGA 137
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ A G D ++ L+ +G DVN D T LH+AA G ++V +LL GADV+
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNAR 76
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGAKPST------APMHVQNAR 140
D G TPL A H +++++L ++GA + P+H+ R
Sbjct: 77 DTDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADR 123
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 51/84 (60%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A+ G L+ ++ LL G DVN +D T LH+AA +G ++V +LL GADV+ +D
Sbjct: 84 LHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQD 143
Query: 101 RWGSTPLADAVYYKHHDVIKLLEE 124
++G T ++ + D+ ++L++
Sbjct: 144 KFGKTAFDISIDNGNEDLAEILQK 167
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 82/195 (42%), Gaps = 29/195 (14%)
Query: 175 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVT-QSTPMMIVTEYLPKGD 233
VA+K L F ++ K EL L++ + H N++ L T Q T YL
Sbjct: 46 VAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 104
Query: 234 LRAYLKQKGALKPTLAVKFALDIAR----------GMNYLHENRPEAIIHRDLEPSNILR 283
+ A L Q ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 105 MDANLCQ--------VIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVV 153
Query: 284 DDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFAL 343
LK+ DFGL A T +T + Y APEV Y VD++S
Sbjct: 154 KSDCTLKILDFGL------ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 207
Query: 344 ILQEMIEGCPPFPTK 358
I+ EM+ FP +
Sbjct: 208 IMGEMVRHKILFPGR 222
>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The
Ankyrin Repeat Domains Of Human Ankra2
Length = 183
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
LM+ A G + ++ LL +G D + +AL +A +G TD+V++LL G DV+ D
Sbjct: 56 LMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYD 115
Query: 101 RWGSTPLADAVYYKHHDVIKLLEEHGAKPS 130
G TPL AV+ H +K+L E GA P+
Sbjct: 116 WNGGTPLLYAVHGNHVKCVKMLLESGADPT 145
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 45 ANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGAD--VDPEDRW 102
++G D +K LLD G DVN D + T L A V++LL GAD ++ + +
Sbjct: 93 CSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGY 152
Query: 103 GSTPLADAVYYKHHDVIKLLEEH 125
S LA A+ Y+ V +++E H
Sbjct: 153 NSMDLAVALGYR--SVQQVIESH 173
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 42/248 (16%)
Query: 143 PEYEIDPKELDFSNSV-------EITKGTF-RIASWRGTQVAVKTLGEEVFTDEDKVKAF 194
P + D E F + V +I +GTF + R + K ++V + +K + F
Sbjct: 2 PAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGF 60
Query: 195 ----IDELALLQKIRHPNVVQFLGAV-TQSTP-------MMIVTEYLPKGDLRAYLKQKG 242
+ E+ +LQ ++H NVV + T+++P + +V ++ + DL
Sbjct: 61 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDL-------A 112
Query: 243 ALKPTLAVKFALD--------IARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADF 294
L + VKF L + G+ Y+H N+ I+HRD++ +N+L G LK+ADF
Sbjct: 113 GLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADF 169
Query: 295 GLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNE-EYDTKVDVFSFALILQEMIEGCP 353
GL++ A + +R T W Y PE+ E +Y +D++ I+ EM P
Sbjct: 170 GLARAFSLAKNSQPNRYXNRVVTLW-YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
Query: 354 PFPTKQEK 361
E+
Sbjct: 229 IMQGNTEQ 236
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 42/248 (16%)
Query: 143 PEYEIDPKELDFSNSV-------EITKGTF-RIASWRGTQVAVKTLGEEVFTDEDKVKAF 194
P + D E F + V +I +GTF + R + K ++V + +K + F
Sbjct: 2 PAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGF 60
Query: 195 ----IDELALLQKIRHPNVVQFLGAV-TQSTP-------MMIVTEYLPKGDLRAYLKQKG 242
+ E+ +LQ ++H NVV + T+++P + +V ++ + DL
Sbjct: 61 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFC-EHDL-------A 112
Query: 243 ALKPTLAVKFALD--------IARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADF 294
L + VKF L + G+ Y+H N+ I+HRD++ +N+L G LK+ADF
Sbjct: 113 GLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADF 169
Query: 295 GLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNE-EYDTKVDVFSFALILQEMIEGCP 353
GL++ A + +R T W Y PE+ E +Y +D++ I+ EM P
Sbjct: 170 GLARAFSLAKNSQPNRYXNRVVTLW-YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
Query: 354 PFPTKQEK 361
E+
Sbjct: 229 IMQGNTEQ 236
>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The
Ankyrin Repeat Domains Of Human Ankra2
pdb|3V31|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The
Ankyrin Repeat Domains Of Human Ankra2
Length = 167
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
LM+ A G + ++ LL +G D + +AL +A +G TD+V++LL G DV+ D
Sbjct: 40 LMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYD 99
Query: 101 RWGSTPLADAVYYKHHDVIKLLEEHGAKPS 130
G TPL AV+ H +K+L E GA P+
Sbjct: 100 WNGGTPLLYAVHGNHVKCVKMLLESGADPT 129
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 45 ANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGAD--VDPEDRW 102
++G D +K LLD G DVN D + T L A V++LL GAD ++ + +
Sbjct: 77 CSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGY 136
Query: 103 GSTPLADAVYYKHHDVIKLLEEH 125
S LA A+ Y+ V +++E H
Sbjct: 137 NSMDLAVALGYR--SVQQVIESH 157
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 42/240 (17%)
Query: 143 PEYEIDPKELDFSNSV-------EITKGTF-RIASWRGTQVAVKTLGEEVFTDEDKVKAF 194
P + D E F + V +I +GTF + R + K ++V + +K + F
Sbjct: 2 PAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGF 60
Query: 195 ----IDELALLQKIRHPNVVQFLGAV-TQSTP-------MMIVTEYLPKGDLRAYLKQKG 242
+ E+ +LQ ++H NVV + T+++P + +V ++ + DL
Sbjct: 61 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDL-------A 112
Query: 243 ALKPTLAVKFALD--------IARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADF 294
L + VKF L + G+ Y+H N+ I+HRD++ +N+L G LK+ADF
Sbjct: 113 GLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADF 169
Query: 295 GLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNE-EYDTKVDVFSFALILQEMIEGCP 353
GL++ A + +R T W Y PE+ E +Y +D++ I+ EM P
Sbjct: 170 GLARAFSLAKNSQPNRYXNRVVTLW-YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
>pdb|3SO8|A Chain A, Crystal Structure Of Ankra
Length = 162
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
LM+ A G + ++ LL +G D + +AL +A +G TD+V++LL G DV+ D
Sbjct: 38 LMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYD 97
Query: 101 RWGSTPLADAVYYKHHDVIKLLEEHGAKPS 130
G TPL AV+ H +K+L E GA P+
Sbjct: 98 WNGGTPLLYAVHGNHVKCVKMLLESGADPT 127
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 45 ANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGAD--VDPEDRW 102
++G D +K LLD G DVN D + T L A V++LL GAD ++ + +
Sbjct: 75 CSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGY 134
Query: 103 GSTPLADAVYYKHHDVIKLLEEH 125
S LA A+ Y+ V +++E H
Sbjct: 135 NSMDLAVALGYR--SVQQVIESH 155
>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
pdb|3NOC|E Chain E, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
Length = 169
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ A G D ++ L+ +G DVN RD T LH+AA G ++V +LL GADV+ +
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAK 76
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGAKPSTAPMH 135
D G TPL A H +++++L ++GA + + H
Sbjct: 77 DSLGVTPLHLAARRGHLEIVEVLLKNGADVNASDSH 112
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A+ G L+ ++ LL +G DVN +D T LH+AA +G ++V +LL GADV+ D
Sbjct: 51 LHLAAHFGHLEIVEVLLKNGADVNAKDSLGVTPLHLAARRGHLEIVEVLLKNGADVNASD 110
Query: 101 RWGSTPLADAVYYKHHDVIKLLEEHGA 127
G TPL A H +++++L ++GA
Sbjct: 111 SHGFTPLHLAAKRGHLEIVEVLLKNGA 137
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A G L+ ++ LL +G DVN D T LH+AA +G ++V +LL GADV+ +D
Sbjct: 84 LHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVNAQD 143
Query: 101 RWGSTPLADAVYYKHHDVIKLLEE 124
++G T ++ + D+ ++L++
Sbjct: 144 KFGKTAFDISIDNGNEDLAEILQK 167
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 159 EITKGTFRIASW-----RGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
E+ KG F + G + A K + + + D K E + + ++HPN+V+
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK-LEREARICRLLKHPNIVRLH 69
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIH 273
++++ +V + + G+L + + A I +N+ H N I+H
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN---GIVH 126
Query: 274 RDLEPSNIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-------RYAA 323
RDL+P N+L + +K+ADFGL+ V ++ +W Y +
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLAI------------EVQGDQQAWFGFAGTPGYLS 174
Query: 324 PEVYKNEEYDTKVDVFSFALILQEMIEGCPPF 355
PEV + + Y VD+++ +IL ++ G PPF
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|D Chain D, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 167
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ A G D ++ L+ +G DVN D T LH+AA G ++V +LL GADVD
Sbjct: 17 KLLEAARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAA 76
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGAK------PSTAPMHV 136
D +G TPL A H +++++L ++GA + P+H+
Sbjct: 77 DVYGFTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHL 119
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A G L+ ++ LL G DV+ D+ T LH+AA G ++V +LL GADV+ D
Sbjct: 51 LHLAAVSGHLEIVEVLLKHGADVDAADVYGFTPLHLAAMTGHLEIVEVLLKYGADVNAFD 110
Query: 101 RWGSTPLADAVYYKHHDVIKLLEEHGA 127
GSTPL A H +++++L ++GA
Sbjct: 111 MTGSTPLHLAADEGHLEIVEVLLKYGA 137
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
L A G L+ ++ LL G DVN D+ T LH+AA +G ++V +LL GADV+ +D
Sbjct: 84 LHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVNAQD 143
Query: 101 RWGSTPLADAVYYKHHDVIK 120
++G T ++ + D+ K
Sbjct: 144 KFGKTAFDISIDNGNEDLAK 163
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 159 EITKGTFRIASW-----RGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFL 213
E+ KG F + G + A K + + + D K E + + ++HPN+V+
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK-LEREARICRLLKHPNIVRLH 69
Query: 214 GAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIH 273
++++ +V + + G+L + + A I +N+ H N I+H
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN---GIVH 126
Query: 274 RDLEPSNIL---RDDSGHLKVADFGLSKLLKFANTVKEDRPVTCEETSW-------RYAA 323
RDL+P N+L + +K+ADFGL+ V ++ +W Y +
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLAI------------EVQGDQQAWFGFAGTPGYLS 174
Query: 324 PEVYKNEEYDTKVDVFSFALILQEMIEGCPPF 355
PEV + + Y VD+++ +IL ++ G PPF
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 76/174 (43%), Gaps = 20/174 (11%)
Query: 196 DELALLQKIRHP------NVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQK-GALKPTL 248
+E+ +L+ +R NV+ L T + + E L K K L
Sbjct: 142 EEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPL 201
Query: 249 AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH--LKVADFGLSKLLKFANTV 306
KFA I + ++ LH+NR IIH DL+P NIL G +KV DFG ++
Sbjct: 202 VRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFG--------SSC 250
Query: 307 KEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQE 360
E + V S Y APEV Y +D++S IL E++ G P P + E
Sbjct: 251 YEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From
Lactococcal Phage Tp901-1
Length = 136
Score = 62.0 bits (149), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 50/88 (56%)
Query: 40 RLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE 99
+L+ A G D ++ L+ +G DVN D T LH+AA ++V +LL GADV+
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAI 76
Query: 100 DRWGSTPLADAVYYKHHDVIKLLEEHGA 127
D G TPL Y H +++++L +HGA
Sbjct: 77 DAIGETPLHLVAMYGHLEIVEVLLKHGA 104
Score = 49.7 bits (117), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 42 MYMANEGD-LDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPED 100
+++A D L+ ++ LL +G DVN D T LH+ A G ++V +LL GADV+ +D
Sbjct: 51 LHLAAMNDHLEIVEVLLKNGADVNAIDAIGETPLHLVAMYGHLEIVEVLLKHGADVNAQD 110
Query: 101 RWGSTPLADAVYYKHHDVIKLLEE 124
++G T ++ + D+ ++L++
Sbjct: 111 KFGKTAFDISIDNGNEDLAEILQK 134
Score = 28.5 bits (62), Expect = 9.2, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 41 LMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLL 89
L +A G L+ ++ LL G DVN +D +TA ++ G D+ +L
Sbjct: 84 LHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,368,167
Number of Sequences: 62578
Number of extensions: 565938
Number of successful extensions: 4942
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 151
Number of HSP's that attempted gapping in prelim test: 1254
Number of HSP's gapped (non-prelim): 1496
length of query: 456
length of database: 14,973,337
effective HSP length: 102
effective length of query: 354
effective length of database: 8,590,381
effective search space: 3040994874
effective search space used: 3040994874
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)