Your job contains 1 sequence.
>012779
MAGIRFSILKSLCSSSIYPSFKPRLLHTSNSYFKLARYAEQKHVKLSCAVVNNNYDNSRL
HSALNSINNQLKVHGFAPIGKTQCHKANAVSSYLPTSKNFCSRRLATFASISPFLGHRSY
SSFFGSKTDKSTEIDVPAASSGSETDVSNHGIVGSDSFDKIKDAWKSVVDGVSYTGQKAK
DELSPQIEQLLDAHPYLRDVIVPVSCYLTGTVLAWVVMPRVLRRFHKYAIQGPVSLLSGG
LSIEQVPYEKSFWGALEDPVRYLITFMAFVQIGMMVAPTTIASQYLAQAWRGAVILSFVW
FLHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTV
GGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKVKRAYTPLKMIFISFFQIGNKV
CRSRDFMLKQRLSVFLTTIHRSCHTCPIREVLNRIR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012779
(456 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2126061 - symbol:AT4G00290 species:3702 "Arabi... 930 2.1e-93 1
TAIR|locus:505006411 - symbol:AT4G00234 "AT4G00234" speci... 725 1.1e-71 1
UNIPROTKB|P0AEB5 - symbol:ynaI "mechanosensitive channel ... 154 3.5e-08 1
UNIPROTKB|Q83CN5 - symbol:CBU_1075 "Mechanosensitive ion ... 152 7.6e-08 1
TIGR_CMR|CBU_1075 - symbol:CBU_1075 "membrane protein, pu... 152 7.6e-08 1
UNIPROTKB|Q74CP0 - symbol:mscS-1 "Small-conductance mecha... 132 1.2e-05 1
TIGR_CMR|GSU_1633 - symbol:GSU_1633 "conserved hypothetic... 132 1.2e-05 1
UNIPROTKB|Q74AJ7 - symbol:GSU2357 "Mechanosensitive ion c... 129 2.3e-05 1
TIGR_CMR|GSU_2357 - symbol:GSU_2357 "conserved hypothetic... 129 2.3e-05 1
TIGR_CMR|NSE_0847 - symbol:NSE_0847 "mechanosensitive ion... 115 0.00078 1
>TAIR|locus:2126061 [details] [associations]
symbol:AT4G00290 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016020 "membrane"
evidence=IEA;ISS] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR006685 InterPro:IPR011014 Pfam:PF00924
GO:GO:0016021 GO:GO:0005739 EMBL:CP002687 GO:GO:0031966
GO:GO:0009941 GO:GO:0005216 EMBL:AF013293 EMBL:AF195115
EMBL:AL161471 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146
SUPFAM:SSF82861 eggNOG:COG0668 EMBL:AY064027 EMBL:AY096611
EMBL:AK176463 EMBL:AK176579 IPI:IPI00546994 PIR:T01542
RefSeq:NP_567165.2 UniGene:At.27096 ProteinModelPortal:Q8VZL4
SMR:Q8VZL4 PRIDE:Q8VZL4 EnsemblPlants:AT4G00290.1 GeneID:828077
KEGG:ath:AT4G00290 TAIR:At4g00290 HOGENOM:HOG000030145
InParanoid:Q8VZL4 OMA:AELTIGC PhylomeDB:Q8VZL4
ProtClustDB:CLSN2690271 Genevestigator:Q8VZL4 Uniprot:Q8VZL4
Length = 497
Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
Identities = 200/350 (57%), Positives = 244/350 (69%)
Query: 62 SALNSINNQLKVHGFAPI--GKTQCH-KANAVSSYL------PTSKNFCSR-RLATFASI 111
S L SI +K H A G H +A + L P+ +F S RL A
Sbjct: 7 SLLKSIQRSIKPHATAKSCSGLLNSHARAFTCGNLLDGPKASPSMISFSSNIRLHNDAKP 66
Query: 112 SPFLGHRSYSSFFGSKTDKSTEIDVPAASSGSETDVSNHGIVGSDSFDKIKDAWKSVVDG 171
+LGH SY+ F SK+D I V + +GS N G+D +K KD ++ VD
Sbjct: 67 FNYLGHSSYARAFSSKSDDFGSI-VASGVTGSGDGNGN----GNDWVEKAKDVLQTSVDA 121
Query: 172 VSYTGQKAKD---ELSPQIEQLLDAHPYLRDVIVPVSCYLTGTVLAWVVMPRVLRRFHKY 228
V+ T +K KD E+ P ++Q LD++PYL+DVIVPVS +TGT+ AWVVMPR+LRRFH Y
Sbjct: 122 VTETAKKTKDVSDEMIPHVQQFLDSNPYLKDVIVPVSLTMTGTLFAWVVMPRILRRFHTY 181
Query: 229 AIQGPVSLLSGGLSIEQVPYEKSFWGALEDPVRYLITFMAFVQIGMMVAPTTIASQYLAQ 288
A+Q LL G S E VPYEKSFWGALEDP RYL+TF+AF QI MVAPTTIA+QY +
Sbjct: 182 AMQSSAKLLPVGFSNEDVPYEKSFWGALEDPARYLVTFIAFAQIAAMVAPTTIAAQYFSP 241
Query: 289 AWRGAVILSFVWFLHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAE 348
+GAVILS VWFL+RWKTNV TR ++++S GLDREK+L LD++SSVGLF IGLMA AE
Sbjct: 242 TVKGAVILSLVWFLYRWKTNVITRMLSAKSFGGLDREKVLTLDKVSSVGLFAIGLMASAE 301
Query: 349 ACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIK 398
ACGVAVQSILTVGG+GGVATAFA+RD+LGNVLSGLSMQFS+PFS+GDTIK
Sbjct: 302 ACGVAVQSILTVGGVGGVATAFAARDILGNVLSGLSMQFSRPFSMGDTIK 351
>TAIR|locus:505006411 [details] [associations]
symbol:AT4G00234 "AT4G00234" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002687 IPI:IPI00540799 RefSeq:NP_567158.1
UniGene:At.54054 EnsemblPlants:AT4G00234.1 GeneID:826310
KEGG:ath:AT4G00234 Uniprot:F4JH25
Length = 263
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 151/267 (56%), Positives = 191/267 (71%)
Query: 99 NFCSR-RLATFASISPFLGHRSYSSFFGSKTDKSTEIDVPAASSGSETDVSNHGIVGSDS 157
+F S RL + A +L H SY+ F SK+D I V + +GS N G+D
Sbjct: 3 SFSSNIRLHSDAKPFNYLSHSSYARAFSSKSDDFGSI-VASGVTGSGD--GN----GNDW 55
Query: 158 FDKIKDAWKSVVDGVSYTGQKAKD---ELSPQIEQLLDAHPYLRDVIVPVSCYLTGTVLA 214
+K KD ++ V+ V+ T +K KD E+ P ++Q LD++PYL+DVIVPVS +TGT+ A
Sbjct: 56 VEKAKDVVQTSVNAVAETAKKTKDVSDEMIPHVQQFLDSNPYLKDVIVPVSLTVTGTLFA 115
Query: 215 WVVMPRVLRRFHKYAIQGPVSLLSGGLSIEQVPYEKSFWGALEDPVRYLITFMAFVQIGM 274
W+VMPR+LRRFH YA+Q LL G S E +PYEKSFWGALEDP RYL+TF+AF QI
Sbjct: 116 WIVMPRILRRFHTYAMQSSAKLLPVGFSNEDIPYEKSFWGALEDPARYLVTFIAFAQIAA 175
Query: 275 MVAPTTIASQYLAQAWRGAVILSFVWFLHRWKTNVFTRAMASQSIAGLDREKMLALDRIS 334
MVAPTTIA+QY + +GAVILS VWFL+RWKTNV TR ++++S GLDR+K+L LD++S
Sbjct: 176 MVAPTTIAAQYFSPTVKGAVILSVVWFLYRWKTNVITRMLSAKSFGGLDRDKVLTLDKVS 235
Query: 335 SVGLFVIGLMALAEACGVAVQSILTVG 361
SVGLF IGLMA AEACGVAVQSILTVG
Sbjct: 236 SVGLFAIGLMASAEACGVAVQSILTVG 262
>UNIPROTKB|P0AEB5 [details] [associations]
symbol:ynaI "mechanosensitive channel YnaI monomer"
species:83333 "Escherichia coli K-12" [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0071470 "cellular response to osmotic
stress" evidence=IGI] [GO:0005887 "integral to plasma membrane"
evidence=RCA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008381 "mechanically-gated ion channel activity"
evidence=IGI;ISS] [GO:0006811 "ion transport" evidence=ISS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR006685 InterPro:IPR006686
InterPro:IPR011014 InterPro:IPR011066 Pfam:PF00924 PROSITE:PS01246
GO:GO:0016021 GO:GO:0005886 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0055085
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689
SUPFAM:SSF82861 eggNOG:COG0668 PIR:E64882 RefSeq:NP_415846.1
RefSeq:YP_489600.1 ProteinModelPortal:P0AEB5 SMR:P0AEB5
EnsemblBacteria:EBESCT00000000495 EnsemblBacteria:EBESCT00000015742
GeneID:12931148 GeneID:945898 KEGG:ecj:Y75_p1307 KEGG:eco:b1330
PATRIC:32117936 EchoBASE:EB3683 EcoGene:EG13924
HOGENOM:HOG000060775 KO:K16052 OMA:ERKTIMF ProtClustDB:CLSK880101
BioCyc:EcoCyc:MONOMER0-82 BioCyc:ECOL316407:JW1323-MONOMER
Genevestigator:P0AEB5 Uniprot:P0AEB5
Length = 343
Score = 154 (59.3 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 36/106 (33%), Positives = 57/106 (53%)
Query: 293 AVILSFVWFLHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGV 352
AVIL+ FL N F + + G D + RI + + V+ ++ E G+
Sbjct: 87 AVILTIKLFL---LINQFEKQQIKK---GRDITSARIMSRIIKITIIVVLVLLYGEHFGM 140
Query: 353 AVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIK 398
++ +LT GGIGG+A A +D+L N SG+ + F +PFS+GD I+
Sbjct: 141 SLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFSIGDWIR 186
>UNIPROTKB|Q83CN5 [details] [associations]
symbol:CBU_1075 "Mechanosensitive ion channel"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006685 InterPro:IPR006686
InterPro:IPR011014 InterPro:IPR011066 Pfam:PF00924 PROSITE:PS01246
GO:GO:0016020 GO:GO:0055085 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689
SUPFAM:SSF82861 HOGENOM:HOG000060775 KO:K16052 OMA:WAHIGVA
RefSeq:NP_820074.1 ProteinModelPortal:Q83CN5 GeneID:1208976
KEGG:cbu:CBU_1075 PATRIC:17930877 ProtClustDB:CLSK914522
BioCyc:CBUR227377:GJ7S-1066-MONOMER Uniprot:Q83CN5
Length = 383
Score = 152 (58.6 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 57/238 (23%), Positives = 110/238 (46%)
Query: 190 LLDAHPYLRDVIVPVSCYLTGTVLAWVVMPRVLRRFHKYAIQGPVSLLSGGLSIEQVPYE 249
LL+ H + +++ + + L W++ R+L RF + + V L + ++ Q P +
Sbjct: 4 LLNTHNSIIKIVLLLIIGSIASFLEWLLYRRLLPRFQR---RQRVWLQAFLQALHQ-PLQ 59
Query: 250 KSFWGALEDPVRYLITFMAFVQIGMMVAPTTIASQYLAQAWRGAVILSFVWFLHRWKTNV 309
W + V ++ + F G A ++S L + VI F R+ +
Sbjct: 60 VYIWVIILSFVASILATLFFFNGGFTDA---LSSTRLI--FTLVVIFWFAMRFIRYLEDG 114
Query: 310 FTRAMASQSIAGL-DREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVAT 368
T A Q + + D + A+ +++ V + L+ L + G+ + ++L GG+G
Sbjct: 115 MTH-QARQKVGKVSDETSVHAIAQLTRVVIIAFVLLMLLQTIGIKISALLAFGGVGVAVI 173
Query: 369 AFASRDVLGNVLSGLSMQFSKPFSLGDTIKVKRAYTPLKMIFISFFQIGNKVCRSRDF 426
FA++D LGN G+ + + +PFS+GD I+ +P + I + IG ++ R R F
Sbjct: 174 GFAAKDTLGNFFGGMMIYWDRPFSVGDWIR-----SPDRQIEGTVENIGWRLTRIRTF 226
>TIGR_CMR|CBU_1075 [details] [associations]
symbol:CBU_1075 "membrane protein, putative"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR006685 InterPro:IPR006686 InterPro:IPR011014
InterPro:IPR011066 Pfam:PF00924 PROSITE:PS01246 GO:GO:0016020
GO:GO:0055085 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689
SUPFAM:SSF82861 HOGENOM:HOG000060775 KO:K16052 OMA:WAHIGVA
RefSeq:NP_820074.1 ProteinModelPortal:Q83CN5 GeneID:1208976
KEGG:cbu:CBU_1075 PATRIC:17930877 ProtClustDB:CLSK914522
BioCyc:CBUR227377:GJ7S-1066-MONOMER Uniprot:Q83CN5
Length = 383
Score = 152 (58.6 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 57/238 (23%), Positives = 110/238 (46%)
Query: 190 LLDAHPYLRDVIVPVSCYLTGTVLAWVVMPRVLRRFHKYAIQGPVSLLSGGLSIEQVPYE 249
LL+ H + +++ + + L W++ R+L RF + + V L + ++ Q P +
Sbjct: 4 LLNTHNSIIKIVLLLIIGSIASFLEWLLYRRLLPRFQR---RQRVWLQAFLQALHQ-PLQ 59
Query: 250 KSFWGALEDPVRYLITFMAFVQIGMMVAPTTIASQYLAQAWRGAVILSFVWFLHRWKTNV 309
W + V ++ + F G A ++S L + VI F R+ +
Sbjct: 60 VYIWVIILSFVASILATLFFFNGGFTDA---LSSTRLI--FTLVVIFWFAMRFIRYLEDG 114
Query: 310 FTRAMASQSIAGL-DREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVAT 368
T A Q + + D + A+ +++ V + L+ L + G+ + ++L GG+G
Sbjct: 115 MTH-QARQKVGKVSDETSVHAIAQLTRVVIIAFVLLMLLQTIGIKISALLAFGGVGVAVI 173
Query: 369 AFASRDVLGNVLSGLSMQFSKPFSLGDTIKVKRAYTPLKMIFISFFQIGNKVCRSRDF 426
FA++D LGN G+ + + +PFS+GD I+ +P + I + IG ++ R R F
Sbjct: 174 GFAAKDTLGNFFGGMMIYWDRPFSVGDWIR-----SPDRQIEGTVENIGWRLTRIRTF 226
>UNIPROTKB|Q74CP0 [details] [associations]
symbol:mscS-1 "Small-conductance mechanosensitive ion
channel" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR006685 InterPro:IPR011014 InterPro:IPR011066
Pfam:PF00924 GO:GO:0016020 GO:GO:0055085 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR010920 SUPFAM:SSF50182
GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861 RefSeq:NP_952684.1
ProteinModelPortal:Q74CP0 GeneID:2687218 KEGG:gsu:GSU1633
PATRIC:22026115 HOGENOM:HOG000130843 OMA:ALFFWVE
ProtClustDB:CLSK828452 BioCyc:GSUL243231:GH27-1602-MONOMER
Uniprot:Q74CP0
Length = 364
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/106 (25%), Positives = 57/106 (53%)
Query: 294 VILSFVWFLHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVA 353
V+ + W + + +A + G+DR+ + L+++ ++ L I LM +
Sbjct: 113 VVTNIAWRITNELLGWYGSRLAERHGGGVDRQIIPPLEKLITIFLAGIALMVVLRHFNYD 172
Query: 354 VQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKV 399
+ S++T GIG +A A+++ L N++SG ++ +PF +GD I++
Sbjct: 173 ILSVVTALGIGSLAIGMAAKETLANMISGFTLMVDRPFRIGDRIQL 218
>TIGR_CMR|GSU_1633 [details] [associations]
symbol:GSU_1633 "conserved hypothetical protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR006685 InterPro:IPR011014 InterPro:IPR011066
Pfam:PF00924 GO:GO:0016020 GO:GO:0055085 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR010920 SUPFAM:SSF50182
GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861 RefSeq:NP_952684.1
ProteinModelPortal:Q74CP0 GeneID:2687218 KEGG:gsu:GSU1633
PATRIC:22026115 HOGENOM:HOG000130843 OMA:ALFFWVE
ProtClustDB:CLSK828452 BioCyc:GSUL243231:GH27-1602-MONOMER
Uniprot:Q74CP0
Length = 364
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/106 (25%), Positives = 57/106 (53%)
Query: 294 VILSFVWFLHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVA 353
V+ + W + + +A + G+DR+ + L+++ ++ L I LM +
Sbjct: 113 VVTNIAWRITNELLGWYGSRLAERHGGGVDRQIIPPLEKLITIFLAGIALMVVLRHFNYD 172
Query: 354 VQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKV 399
+ S++T GIG +A A+++ L N++SG ++ +PF +GD I++
Sbjct: 173 ILSVVTALGIGSLAIGMAAKETLANMISGFTLMVDRPFRIGDRIQL 218
>UNIPROTKB|Q74AJ7 [details] [associations]
symbol:GSU2357 "Mechanosensitive ion channel family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR006685 InterPro:IPR011014 InterPro:IPR011066
Pfam:PF00924 GO:GO:0016020 GO:GO:0055085 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR010920 SUPFAM:SSF50182
GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861 RefSeq:NP_953404.1
ProteinModelPortal:Q74AJ7 GeneID:2688088 KEGG:gsu:GSU2357
PATRIC:22027563 HOGENOM:HOG000033499 OMA:WRSTWIK
ProtClustDB:CLSK924600 BioCyc:GSUL243231:GH27-2351-MONOMER
Uniprot:Q74AJ7
Length = 348
Score = 129 (50.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 38/146 (26%), Positives = 71/146 (48%)
Query: 258 DPVRYLITFMAFVQ--IGMMV-APTTIASQYLA-QAWRGAVILSFVWFLHRWKTNVFTRA 313
D +R L+ + A + G+ P T+ Q LA + +IL F R T
Sbjct: 52 DSLRGLLLYSALLTGLYGVATQVPMTVGLQRLAGNIFLVTIILVATLFFMRLAAGFVTH- 110
Query: 314 MASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASR 373
A +++ + ++ V +F IG++ + ++ G+++ ILT G+GG+A A A +
Sbjct: 111 YAKKAVL----PSISIFSNLAKVSVFSIGILIILQSLGISIAPILTALGVGGLAVALALQ 166
Query: 374 DVLGNVLSGLSMQFSKPFSLGDTIKV 399
D L N+ +GL + ++ GD I++
Sbjct: 167 DTLSNIFAGLHIIATRQIRQGDYIRL 192
>TIGR_CMR|GSU_2357 [details] [associations]
symbol:GSU_2357 "conserved hypothetical protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR006685 InterPro:IPR011014 InterPro:IPR011066
Pfam:PF00924 GO:GO:0016020 GO:GO:0055085 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR010920 SUPFAM:SSF50182
GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861 RefSeq:NP_953404.1
ProteinModelPortal:Q74AJ7 GeneID:2688088 KEGG:gsu:GSU2357
PATRIC:22027563 HOGENOM:HOG000033499 OMA:WRSTWIK
ProtClustDB:CLSK924600 BioCyc:GSUL243231:GH27-2351-MONOMER
Uniprot:Q74AJ7
Length = 348
Score = 129 (50.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 38/146 (26%), Positives = 71/146 (48%)
Query: 258 DPVRYLITFMAFVQ--IGMMV-APTTIASQYLA-QAWRGAVILSFVWFLHRWKTNVFTRA 313
D +R L+ + A + G+ P T+ Q LA + +IL F R T
Sbjct: 52 DSLRGLLLYSALLTGLYGVATQVPMTVGLQRLAGNIFLVTIILVATLFFMRLAAGFVTH- 110
Query: 314 MASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASR 373
A +++ + ++ V +F IG++ + ++ G+++ ILT G+GG+A A A +
Sbjct: 111 YAKKAVL----PSISIFSNLAKVSVFSIGILIILQSLGISIAPILTALGVGGLAVALALQ 166
Query: 374 DVLGNVLSGLSMQFSKPFSLGDTIKV 399
D L N+ +GL + ++ GD I++
Sbjct: 167 DTLSNIFAGLHIIATRQIRQGDYIRL 192
>TIGR_CMR|NSE_0847 [details] [associations]
symbol:NSE_0847 "mechanosensitive ion channel family
protein" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0005216 "ion channel activity" evidence=ISS] [GO:0006811 "ion
transport" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR006685 InterPro:IPR011014 Pfam:PF00924 GO:GO:0016020
GO:GO:0055085 EMBL:CP000237 GenomeReviews:CP000237_GR
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82861
eggNOG:COG0668 KO:K16052 RefSeq:YP_506715.1
ProteinModelPortal:Q2GCT1 STRING:Q2GCT1 GeneID:3931811
KEGG:nse:NSE_0847 PATRIC:22681691 HOGENOM:HOG000127178 OMA:DIGIRYD
ProtClustDB:CLSK2527686 BioCyc:NSEN222891:GHFU-852-MONOMER
Uniprot:Q2GCT1
Length = 337
Score = 115 (45.5 bits), Expect = 0.00078, P = 0.00078
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 338 LFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTI 397
L V+GLM L + V + IL VGGIGGV AS+D+ + +++ +PF +GD I
Sbjct: 127 LLVVGLMIL-DKLNVNISGILAVGGIGGVVIGLASKDLFSSFFGFITILLDRPFKVGDLI 185
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.135 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 456 456 0.00094 118 3 11 22 0.47 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 614 (65 KB)
Total size of DFA: 264 KB (2140 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 41.94u 0.17s 42.11t Elapsed: 00:00:02
Total cpu time: 41.94u 0.17s 42.11t Elapsed: 00:00:02
Start: Sat May 11 12:46:15 2013 End: Sat May 11 12:46:17 2013