Query 012783
Match_columns 456
No_of_seqs 394 out of 2810
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 16:08:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012783.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012783hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yxl_A PH0851 protein, 450AA l 100.0 1.3E-63 4.4E-68 523.3 34.4 364 56-456 9-379 (450)
2 1sqg_A SUN protein, FMU protei 100.0 5.8E-62 2E-66 507.8 33.4 358 59-456 6-364 (429)
3 1ixk_A Methyltransferase; open 100.0 2.6E-41 9E-46 338.4 24.1 232 218-456 5-236 (315)
4 2frx_A Hypothetical protein YE 100.0 1.7E-39 6E-44 342.1 19.3 226 226-456 5-236 (479)
5 3m6w_A RRNA methylase; rRNA me 100.0 1.9E-38 6.6E-43 331.9 17.4 218 228-456 1-219 (464)
6 3m4x_A NOL1/NOP2/SUN family pr 100.0 1.5E-38 5E-43 332.3 13.7 215 227-456 6-224 (456)
7 2b9e_A NOL1/NOP2/SUN domain fa 100.0 2.9E-35 9.9E-40 293.8 19.2 199 253-456 6-225 (309)
8 3ajd_A Putative methyltransfer 100.0 1.6E-31 5.4E-36 262.0 17.1 196 250-455 2-200 (274)
9 4fzv_A Putative methyltransfer 100.0 4.6E-31 1.6E-35 267.7 17.7 215 233-456 23-274 (359)
10 1tzv_A NUSB protein, N utiliza 100.0 1.7E-29 5.9E-34 224.3 13.1 128 58-203 6-135 (142)
11 3r2d_A Protein NUSB, N utiliza 100.0 1.6E-29 5.6E-34 226.0 9.4 130 57-203 5-136 (149)
12 3d3b_A Protein NUSB, N utiliza 100.0 4.7E-29 1.6E-33 221.2 12.0 127 58-202 9-136 (141)
13 1eyv_A NUSB protein, N-utilizi 99.9 3.3E-28 1.1E-32 219.2 9.1 133 57-203 10-143 (156)
14 3lpm_A Putative methyltransfer 99.5 4.6E-14 1.6E-18 136.2 12.7 127 322-456 37-166 (259)
15 1nv8_A HEMK protein; class I a 99.5 1.4E-13 4.7E-18 135.3 9.8 180 231-426 21-213 (284)
16 4dmg_A Putative uncharacterize 99.4 8.2E-13 2.8E-17 135.6 13.2 103 307-416 190-292 (393)
17 2qm3_A Predicted methyltransfe 99.4 3.8E-12 1.3E-16 129.6 17.0 210 172-417 25-254 (373)
18 1yb2_A Hypothetical protein TA 99.4 9.5E-14 3.3E-18 135.2 3.9 159 249-413 28-188 (275)
19 1i1n_A Protein-L-isoaspartate 99.4 5.6E-12 1.9E-16 118.4 15.0 138 269-415 7-162 (226)
20 3u81_A Catechol O-methyltransf 99.4 1.2E-12 4.1E-17 123.0 9.4 103 315-417 40-147 (221)
21 2igt_A SAM dependent methyltra 99.4 1.2E-12 4.2E-17 131.4 9.9 109 307-418 126-239 (332)
22 2ozv_A Hypothetical protein AT 99.4 1.8E-12 6E-17 125.5 10.5 129 320-456 23-160 (260)
23 3c0k_A UPF0064 protein YCCW; P 99.3 2E-12 7E-17 132.6 10.7 106 307-417 197-306 (396)
24 3gdh_A Trimethylguanosine synt 99.3 2E-12 6.7E-17 122.7 9.7 104 313-421 56-161 (241)
25 3v97_A Ribosomal RNA large sub 99.3 4E-12 1.4E-16 139.6 13.2 106 308-418 517-623 (703)
26 1wxx_A TT1595, hypothetical pr 99.3 2.7E-12 9.1E-17 131.2 10.0 103 307-417 187-292 (382)
27 3id6_C Fibrillarin-like rRNA/T 99.3 7.9E-12 2.7E-16 119.3 12.6 95 317-414 57-156 (232)
28 2b3t_A Protein methyltransfera 99.3 9.2E-12 3.1E-16 121.1 13.0 104 312-419 86-191 (276)
29 3tfw_A Putative O-methyltransf 99.3 3.3E-12 1.1E-16 122.6 9.4 101 316-416 46-148 (248)
30 2b78_A Hypothetical protein SM 99.3 4.3E-12 1.5E-16 129.9 10.0 106 308-417 189-298 (385)
31 2as0_A Hypothetical protein PH 99.3 7E-12 2.4E-16 128.6 11.6 106 308-417 194-302 (396)
32 3axs_A Probable N(2),N(2)-dime 99.3 3.7E-12 1.3E-16 130.4 9.4 106 311-416 24-137 (392)
33 3dr5_A Putative O-methyltransf 99.3 7.4E-12 2.5E-16 118.4 10.6 100 316-415 36-140 (221)
34 3duw_A OMT, O-methyltransferas 99.3 3.1E-12 1.1E-16 119.9 7.8 101 316-416 41-145 (223)
35 3k6r_A Putative transferase PH 99.3 7.3E-12 2.5E-16 122.6 10.7 101 314-420 108-208 (278)
36 3c3y_A Pfomt, O-methyltransfer 99.3 5.5E-12 1.9E-16 120.3 9.5 103 314-416 51-159 (237)
37 2gpy_A O-methyltransferase; st 99.3 5E-12 1.7E-16 119.5 8.9 104 311-415 32-137 (233)
38 3mb5_A SAM-dependent methyltra 99.3 2.3E-11 7.7E-16 116.3 12.9 104 310-415 70-173 (255)
39 3r3h_A O-methyltransferase, SA 99.3 1.3E-12 4.5E-17 125.2 3.7 103 313-415 40-147 (242)
40 2dul_A N(2),N(2)-dimethylguano 99.3 7.4E-12 2.5E-16 127.9 8.9 101 317-419 31-146 (378)
41 3ntv_A MW1564 protein; rossman 99.3 1.5E-11 5.1E-16 116.6 10.2 104 313-417 51-155 (232)
42 3tr6_A O-methyltransferase; ce 99.3 6.3E-12 2.2E-16 117.8 7.5 103 313-415 44-151 (225)
43 3eey_A Putative rRNA methylase 99.3 1.9E-11 6.6E-16 112.1 10.6 85 330-414 19-103 (197)
44 1sui_A Caffeoyl-COA O-methyltr 99.3 1.1E-11 3.9E-16 119.0 9.4 102 314-415 60-167 (247)
45 1m6y_A S-adenosyl-methyltransf 99.2 8.4E-12 2.9E-16 123.6 8.2 91 324-417 17-111 (301)
46 3e05_A Precorrin-6Y C5,15-meth 99.2 8.2E-11 2.8E-15 108.7 13.8 100 312-415 20-119 (204)
47 2frn_A Hypothetical protein PH 99.2 3.1E-11 1.1E-15 117.9 11.5 102 313-420 107-208 (278)
48 3evz_A Methyltransferase; NYSG 99.2 1.1E-10 3.7E-15 109.7 14.3 86 330-419 52-138 (230)
49 3tma_A Methyltransferase; thum 99.2 1E-10 3.4E-15 118.0 15.0 99 315-415 185-283 (354)
50 3p9n_A Possible methyltransfer 99.2 4.1E-11 1.4E-15 109.5 10.6 82 332-416 43-125 (189)
51 3a27_A TYW2, uncharacterized p 99.2 6.5E-11 2.2E-15 115.3 12.5 97 314-414 100-196 (272)
52 3c3p_A Methyltransferase; NP_9 99.2 2.1E-11 7.2E-16 113.3 8.1 102 313-415 36-137 (210)
53 3njr_A Precorrin-6Y methylase; 99.2 1.5E-10 5.1E-15 107.8 13.3 92 317-412 39-130 (204)
54 2esr_A Methyltransferase; stru 99.2 6.9E-11 2.4E-15 106.5 10.0 88 326-415 23-111 (177)
55 4df3_A Fibrillarin-like rRNA/T 99.2 7.6E-11 2.6E-15 112.4 10.5 86 329-417 73-160 (233)
56 3lbf_A Protein-L-isoaspartate 99.2 2E-10 7E-15 106.3 13.0 98 313-415 57-154 (210)
57 1o54_A SAM-dependent O-methylt 99.2 1.7E-10 5.8E-15 112.1 13.0 93 321-415 100-192 (277)
58 4dzr_A Protein-(glutamine-N5) 99.2 2.2E-11 7.4E-16 112.3 5.8 109 313-424 6-121 (215)
59 2h00_A Methyltransferase 10 do 99.2 2.2E-10 7.6E-15 109.5 12.9 85 333-418 65-154 (254)
60 2fpo_A Methylase YHHF; structu 99.1 6.8E-11 2.3E-15 109.8 8.6 79 333-414 54-132 (202)
61 3bt7_A TRNA (uracil-5-)-methyl 99.1 8.6E-11 2.9E-15 119.5 10.0 88 326-418 207-309 (369)
62 3mti_A RRNA methylase; SAM-dep 99.1 1.1E-10 3.9E-15 105.8 9.8 80 331-414 20-99 (185)
63 2ift_A Putative methylase HI07 99.1 9.4E-11 3.2E-15 108.7 9.0 80 333-414 53-135 (201)
64 1uwv_A 23S rRNA (uracil-5-)-me 99.1 1.7E-10 5.8E-15 119.8 11.1 91 325-419 278-371 (433)
65 1dl5_A Protein-L-isoaspartate 99.1 3.5E-10 1.2E-14 112.4 12.8 99 318-418 60-158 (317)
66 2avd_A Catechol-O-methyltransf 99.1 8.2E-11 2.8E-15 110.5 7.8 102 313-414 49-155 (229)
67 1wy7_A Hypothetical protein PH 99.1 2.8E-10 9.7E-15 105.0 11.1 79 330-416 46-124 (207)
68 3tm4_A TRNA (guanine N2-)-meth 99.1 2.8E-10 9.5E-15 115.9 11.4 95 318-415 203-297 (373)
69 2h1r_A Dimethyladenosine trans 99.1 1.4E-10 4.7E-15 114.7 8.7 97 315-418 24-120 (299)
70 2pwy_A TRNA (adenine-N(1)-)-me 99.1 7E-10 2.4E-14 105.7 13.0 100 314-415 77-177 (258)
71 3hm2_A Precorrin-6Y C5,15-meth 99.1 4.4E-10 1.5E-14 100.7 10.6 102 312-416 5-106 (178)
72 3cbg_A O-methyltransferase; cy 99.1 1.3E-10 4.5E-15 110.2 7.3 99 316-414 55-158 (232)
73 1i9g_A Hypothetical protein RV 99.1 7.1E-10 2.4E-14 107.3 12.6 100 313-413 79-180 (280)
74 2b25_A Hypothetical protein; s 99.1 6.1E-10 2.1E-14 111.3 11.8 104 312-415 84-198 (336)
75 1dus_A MJ0882; hypothetical pr 99.1 1.1E-09 3.6E-14 99.1 12.1 91 320-415 39-130 (194)
76 2fhp_A Methylase, putative; al 99.1 4.5E-10 1.5E-14 101.5 9.5 87 326-414 36-126 (187)
77 1r18_A Protein-L-isoaspartate( 99.0 1.2E-09 4.1E-14 102.7 12.6 97 318-416 67-175 (227)
78 3fpf_A Mtnas, putative unchara 99.0 7.2E-10 2.5E-14 109.1 11.4 81 328-413 117-197 (298)
79 2pbf_A Protein-L-isoaspartate 99.0 9.5E-10 3.3E-14 103.1 11.6 92 323-416 68-174 (227)
80 2yxd_A Probable cobalt-precorr 99.0 1.2E-09 4E-14 98.0 11.6 93 315-413 17-109 (183)
81 2yxe_A Protein-L-isoaspartate 99.0 1.4E-09 4.8E-14 100.9 12.5 101 313-415 57-157 (215)
82 2yx1_A Hypothetical protein MJ 99.0 5.7E-10 2E-14 112.0 10.4 81 332-420 194-274 (336)
83 1jg1_A PIMT;, protein-L-isoasp 99.0 1.2E-09 4.2E-14 103.3 12.0 102 311-416 69-170 (235)
84 2r6z_A UPF0341 protein in RSP 99.0 1.1E-10 3.8E-15 113.1 4.8 92 322-416 72-173 (258)
85 2hnk_A SAM-dependent O-methylt 99.0 4.3E-10 1.5E-14 106.7 8.8 98 316-413 43-156 (239)
86 2jjq_A Uncharacterized RNA met 99.0 7.9E-10 2.7E-14 114.5 11.5 80 331-418 288-367 (425)
87 4dcm_A Ribosomal RNA large sub 99.0 1.4E-09 4.9E-14 110.8 12.7 101 313-416 200-304 (375)
88 1nt2_A Fibrillarin-like PRE-rR 99.0 1.5E-09 5.3E-14 101.5 11.2 80 329-412 53-134 (210)
89 3gnl_A Uncharacterized protein 99.0 7.4E-10 2.5E-14 106.2 9.0 78 331-410 19-96 (244)
90 3g89_A Ribosomal RNA small sub 99.0 9.3E-10 3.2E-14 105.8 9.5 80 331-412 78-159 (249)
91 1nkv_A Hypothetical protein YJ 99.0 2.2E-09 7.6E-14 102.1 12.1 85 322-410 25-109 (256)
92 4gek_A TRNA (CMO5U34)-methyltr 99.0 1.2E-09 4.2E-14 105.8 10.3 89 317-410 56-145 (261)
93 1xxl_A YCGJ protein; structura 99.0 1.6E-09 5.5E-14 102.6 10.9 91 317-412 5-95 (239)
94 3lec_A NADB-rossmann superfami 99.0 1.1E-09 3.7E-14 104.2 9.6 78 331-410 19-96 (230)
95 1xdz_A Methyltransferase GIDB; 99.0 1.5E-09 5E-14 103.2 10.4 81 330-412 67-149 (240)
96 1zq9_A Probable dimethyladenos 99.0 1.5E-09 5E-14 106.5 10.6 97 315-417 10-106 (285)
97 3ll7_A Putative methyltransfer 99.0 4E-10 1.4E-14 115.8 6.7 81 333-417 93-176 (410)
98 1yzh_A TRNA (guanine-N(7)-)-me 99.0 3E-09 1E-13 99.0 11.9 81 332-414 40-121 (214)
99 3kr9_A SAM-dependent methyltra 99.0 1.4E-09 4.9E-14 103.1 9.5 78 331-410 13-90 (225)
100 1g8a_A Fibrillarin-like PRE-rR 99.0 1.8E-09 6.3E-14 101.2 10.2 80 331-413 71-152 (227)
101 2oyr_A UPF0341 protein YHIQ; a 99.0 8.3E-10 2.9E-14 106.9 7.9 92 322-416 75-176 (258)
102 1vl5_A Unknown conserved prote 99.0 2.1E-09 7.4E-14 102.8 10.8 99 308-411 12-110 (260)
103 2yvl_A TRMI protein, hypotheti 99.0 6.6E-09 2.2E-13 98.3 13.8 93 317-413 75-167 (248)
104 2ipx_A RRNA 2'-O-methyltransfe 99.0 4.3E-09 1.5E-13 99.3 12.2 83 328-413 72-156 (233)
105 3k0b_A Predicted N6-adenine-sp 99.0 3.1E-09 1.1E-13 108.9 12.1 91 322-414 190-317 (393)
106 3ldg_A Putative uncharacterize 99.0 3.4E-09 1.2E-13 108.3 12.3 91 323-415 184-311 (384)
107 3ldu_A Putative methylase; str 98.9 2.9E-09 1E-13 108.9 11.5 106 308-415 164-312 (385)
108 2fca_A TRNA (guanine-N(7)-)-me 98.9 3.9E-09 1.3E-13 98.7 11.4 81 332-414 37-118 (213)
109 3grz_A L11 mtase, ribosomal pr 98.9 3.6E-09 1.2E-13 97.5 10.8 88 322-415 47-136 (205)
110 3vc1_A Geranyl diphosphate 2-C 98.9 3.3E-09 1.1E-13 104.7 11.2 93 316-411 99-192 (312)
111 1l3i_A Precorrin-6Y methyltran 98.9 4.8E-09 1.6E-13 94.5 11.3 94 317-414 17-110 (192)
112 3dh0_A SAM dependent methyltra 98.9 4E-09 1.4E-13 97.9 11.0 87 323-411 27-113 (219)
113 1vbf_A 231AA long hypothetical 98.9 4.7E-09 1.6E-13 98.5 11.4 97 313-416 50-146 (231)
114 3gru_A Dimethyladenosine trans 98.9 3.5E-09 1.2E-13 104.5 10.8 94 315-415 32-125 (295)
115 3kkz_A Uncharacterized protein 98.9 4.2E-09 1.4E-13 101.2 11.2 89 325-416 37-126 (267)
116 3hem_A Cyclopropane-fatty-acyl 98.9 5.8E-09 2E-13 102.3 12.4 83 323-411 62-144 (302)
117 3dxy_A TRNA (guanine-N(7)-)-me 98.9 4.3E-09 1.5E-13 99.0 10.4 79 333-413 34-114 (218)
118 1o9g_A RRNA methyltransferase; 98.9 2E-09 6.7E-14 102.9 7.9 90 330-419 48-183 (250)
119 1fbn_A MJ fibrillarin homologu 98.9 3.8E-09 1.3E-13 99.6 9.8 81 329-415 70-154 (230)
120 3f4k_A Putative methyltransfer 98.9 5.6E-09 1.9E-13 99.3 10.8 83 330-415 43-125 (257)
121 1ws6_A Methyltransferase; stru 98.9 2.1E-09 7.1E-14 95.5 6.9 78 333-415 41-121 (171)
122 1ne2_A Hypothetical protein TA 98.9 4.6E-09 1.6E-13 96.5 8.9 74 330-415 48-121 (200)
123 3dou_A Ribosomal RNA large sub 98.9 1.7E-09 5.8E-14 99.7 5.8 74 331-419 23-106 (191)
124 3bus_A REBM, methyltransferase 98.9 1.2E-08 4.2E-13 98.0 11.9 91 318-411 46-136 (273)
125 3dmg_A Probable ribosomal RNA 98.9 1E-08 3.6E-13 104.6 11.7 92 319-416 213-310 (381)
126 3dlc_A Putative S-adenosyl-L-m 98.8 9.5E-09 3.3E-13 94.7 10.3 89 321-413 32-120 (219)
127 2bm8_A Cephalosporin hydroxyla 98.8 1.4E-09 4.8E-14 103.6 4.5 93 315-413 62-161 (236)
128 2ar0_A M.ecoki, type I restric 98.8 6.1E-09 2.1E-13 111.0 9.9 109 312-420 148-277 (541)
129 3bkx_A SAM-dependent methyltra 98.8 9.5E-09 3.2E-13 98.9 10.3 96 318-414 28-132 (275)
130 2xvm_A Tellurite resistance pr 98.8 1.5E-08 5.2E-13 92.1 11.0 85 323-413 22-106 (199)
131 2f8l_A Hypothetical protein LM 98.8 7.2E-09 2.4E-13 104.0 9.5 82 330-415 127-212 (344)
132 2okc_A Type I restriction enzy 98.8 5.7E-09 1.9E-13 108.6 8.9 107 312-420 150-269 (445)
133 2vdv_E TRNA (guanine-N(7)-)-me 98.8 1.4E-08 4.7E-13 96.9 10.9 83 331-415 47-139 (246)
134 1qam_A ERMC' methyltransferase 98.8 1.9E-08 6.7E-13 96.2 11.0 96 314-416 11-106 (244)
135 1inl_A Spermidine synthase; be 98.8 8.8E-09 3E-13 101.5 8.7 85 333-418 90-177 (296)
136 1kpg_A CFA synthase;, cyclopro 98.8 2.3E-08 8E-13 96.9 11.6 82 324-411 55-136 (287)
137 3tqs_A Ribosomal RNA small sub 98.8 1E-08 3.5E-13 99.1 8.9 90 319-415 15-107 (255)
138 2fk8_A Methoxy mycolic acid sy 98.8 2.5E-08 8.5E-13 98.4 11.6 84 323-412 80-163 (318)
139 3jwh_A HEN1; methyltransferase 98.8 1.4E-08 4.7E-13 94.4 9.1 86 324-411 20-109 (217)
140 2o57_A Putative sarcosine dime 98.8 2.6E-08 9E-13 97.0 11.4 89 320-411 65-157 (297)
141 1jsx_A Glucose-inhibited divis 98.8 1.9E-08 6.6E-13 92.5 9.8 75 333-411 65-139 (207)
142 2pjd_A Ribosomal RNA small sub 98.8 1.7E-08 5.7E-13 101.3 9.8 91 319-415 182-272 (343)
143 3q87_B N6 adenine specific DNA 98.8 8.3E-09 2.8E-13 92.9 6.6 82 319-416 7-90 (170)
144 3g5t_A Trans-aconitate 3-methy 98.8 4.2E-08 1.4E-12 96.0 11.9 82 331-412 34-121 (299)
145 3gu3_A Methyltransferase; alph 98.8 2.3E-08 8E-13 97.2 10.0 88 321-412 10-97 (284)
146 3ocj_A Putative exported prote 98.7 7.1E-09 2.4E-13 101.9 6.1 83 330-414 115-197 (305)
147 3fut_A Dimethyladenosine trans 98.7 2.2E-08 7.4E-13 97.6 9.4 89 320-416 34-122 (271)
148 1yub_A Ermam, rRNA methyltrans 98.7 1.3E-09 4.5E-14 104.1 0.6 97 315-418 11-107 (245)
149 3jwg_A HEN1, methyltransferase 98.7 1.9E-08 6.5E-13 93.5 8.4 87 323-411 19-109 (219)
150 1mjf_A Spermidine synthase; sp 98.7 8.9E-09 3E-13 100.6 6.4 80 332-415 74-163 (281)
151 3mgg_A Methyltransferase; NYSG 98.7 5.5E-08 1.9E-12 93.6 11.8 86 324-412 28-113 (276)
152 2ih2_A Modification methylase 98.7 1.3E-08 4.4E-13 104.3 7.5 96 312-419 18-113 (421)
153 3v97_A Ribosomal RNA large sub 98.7 4.3E-08 1.5E-12 107.6 12.0 92 323-414 180-313 (703)
154 3r0q_C Probable protein argini 98.7 4.3E-08 1.5E-12 99.7 11.0 82 328-414 58-139 (376)
155 3uwp_A Histone-lysine N-methyl 98.7 3.7E-08 1.3E-12 100.8 10.4 91 324-415 164-263 (438)
156 3orh_A Guanidinoacetate N-meth 98.7 1.9E-08 6.6E-13 95.5 7.6 84 331-418 58-142 (236)
157 3m70_A Tellurite resistance pr 98.7 4.2E-08 1.4E-12 95.1 10.3 83 325-414 112-194 (286)
158 1g6q_1 HnRNP arginine N-methyl 98.7 3.6E-08 1.2E-12 98.4 9.7 84 329-416 34-117 (328)
159 4htf_A S-adenosylmethionine-de 98.7 5.7E-08 1.9E-12 94.2 10.6 77 333-412 68-144 (285)
160 1zx0_A Guanidinoacetate N-meth 98.7 2.5E-08 8.7E-13 94.1 7.9 77 331-411 58-135 (236)
161 3q7e_A Protein arginine N-meth 98.7 5.1E-08 1.8E-12 98.1 10.5 81 331-415 64-144 (349)
162 2fyt_A Protein arginine N-meth 98.7 7.2E-08 2.5E-12 96.8 11.3 84 325-412 56-139 (340)
163 1pjz_A Thiopurine S-methyltran 98.7 1.7E-08 5.9E-13 93.5 6.1 79 328-410 17-107 (203)
164 3lkd_A Type I restriction-modi 98.7 5.6E-08 1.9E-12 103.5 10.8 105 313-417 197-310 (542)
165 3ofk_A Nodulation protein S; N 98.7 2.9E-08 1E-12 91.9 7.5 84 320-411 38-121 (216)
166 3fzg_A 16S rRNA methylase; met 98.7 3.5E-08 1.2E-12 90.9 7.8 74 332-410 48-121 (200)
167 1ri5_A MRNA capping enzyme; me 98.7 6.5E-08 2.2E-12 93.7 10.1 80 331-412 62-141 (298)
168 3adn_A Spermidine synthase; am 98.7 2.1E-08 7.3E-13 98.8 6.6 81 333-414 83-167 (294)
169 2y1w_A Histone-arginine methyl 98.7 9.2E-08 3.2E-12 96.2 11.4 86 325-415 42-127 (348)
170 3ckk_A TRNA (guanine-N(7)-)-me 98.7 6.4E-08 2.2E-12 92.1 9.6 81 331-413 44-132 (235)
171 2o07_A Spermidine synthase; st 98.7 3.4E-08 1.2E-12 97.7 7.8 83 331-414 93-178 (304)
172 3tka_A Ribosomal RNA small sub 98.7 1.7E-08 5.8E-13 100.4 5.5 89 324-417 48-141 (347)
173 1iy9_A Spermidine synthase; ro 98.7 3.7E-08 1.3E-12 96.0 7.9 81 333-414 75-158 (275)
174 1wg8_A Predicted S-adenosylmet 98.6 2.6E-08 8.9E-13 96.9 6.6 85 324-416 13-101 (285)
175 1ej0_A FTSJ; methyltransferase 98.6 3.9E-08 1.3E-12 86.9 7.1 77 331-419 20-103 (180)
176 3ujc_A Phosphoethanolamine N-m 98.6 5.2E-08 1.8E-12 92.7 8.5 83 323-411 45-127 (266)
177 3dtn_A Putative methyltransfer 98.6 8.7E-08 3E-12 89.8 9.8 83 324-412 34-117 (234)
178 2p35_A Trans-aconitate 2-methy 98.6 1.2E-07 4E-12 90.1 10.7 87 317-412 17-103 (259)
179 2plw_A Ribosomal RNA methyltra 98.6 7.6E-08 2.6E-12 88.0 8.9 76 331-418 20-120 (201)
180 3khk_A Type I restriction-modi 98.6 3.5E-08 1.2E-12 105.2 7.5 105 312-417 224-342 (544)
181 2nxc_A L11 mtase, ribosomal pr 98.6 1E-07 3.5E-12 91.5 9.8 77 331-414 118-194 (254)
182 1ve3_A Hypothetical protein PH 98.6 1.6E-07 5.4E-12 87.3 10.7 76 332-413 37-112 (227)
183 3uzu_A Ribosomal RNA small sub 98.6 1.1E-07 3.9E-12 92.8 10.2 93 318-415 27-125 (279)
184 3b3j_A Histone-arginine methyl 98.6 9.8E-08 3.4E-12 100.3 10.1 82 327-413 152-233 (480)
185 3p2e_A 16S rRNA methylase; met 98.6 3.9E-08 1.3E-12 92.9 6.3 81 331-413 22-106 (225)
186 2kw5_A SLR1183 protein; struct 98.6 8.7E-08 3E-12 87.7 8.1 74 331-411 28-101 (202)
187 4fsd_A Arsenic methyltransfera 98.6 1.1E-07 3.9E-12 96.7 9.8 82 331-412 81-174 (383)
188 1u2z_A Histone-lysine N-methyl 98.6 1.7E-07 5.9E-12 96.9 11.1 89 324-414 233-333 (433)
189 3ftd_A Dimethyladenosine trans 98.6 7.9E-08 2.7E-12 92.4 8.0 95 315-416 13-107 (249)
190 4hc4_A Protein arginine N-meth 98.6 9.3E-08 3.2E-12 97.3 8.9 76 332-412 82-157 (376)
191 2gb4_A Thiopurine S-methyltran 98.6 1.4E-07 4.7E-12 90.8 9.5 78 330-410 65-158 (252)
192 3ou2_A SAM-dependent methyltra 98.6 2.4E-07 8.1E-12 85.3 10.8 76 326-411 39-114 (218)
193 2p41_A Type II methyltransfera 98.6 8.9E-09 3E-13 102.0 1.2 78 331-419 80-162 (305)
194 1wzn_A SAM-dependent methyltra 98.6 2.2E-07 7.4E-12 88.1 10.8 74 330-410 38-111 (252)
195 3iv6_A Putative Zn-dependent a 98.6 1.3E-07 4.6E-12 91.5 9.3 87 321-413 33-119 (261)
196 2pt6_A Spermidine synthase; tr 98.6 4.3E-08 1.5E-12 97.8 5.9 82 332-414 115-199 (321)
197 2b2c_A Spermidine synthase; be 98.6 4.9E-08 1.7E-12 97.1 6.2 82 332-414 107-191 (314)
198 3g07_A 7SK snRNA methylphospha 98.6 1.1E-07 3.9E-12 93.0 8.7 49 333-382 46-94 (292)
199 1xj5_A Spermidine synthase 1; 98.6 8.5E-08 2.9E-12 96.1 7.9 82 331-413 118-203 (334)
200 2yqz_A Hypothetical protein TT 98.5 1.8E-07 6.3E-12 88.8 9.4 76 330-411 36-111 (263)
201 3g2m_A PCZA361.24; SAM-depende 98.5 1.5E-07 5.2E-12 92.0 9.0 81 324-410 74-156 (299)
202 3m33_A Uncharacterized protein 98.5 1.8E-07 6.2E-12 87.7 9.0 72 331-411 46-118 (226)
203 2i7c_A Spermidine synthase; tr 98.5 1E-07 3.5E-12 93.2 7.5 83 331-414 76-161 (283)
204 3bwc_A Spermidine synthase; SA 98.5 1.4E-07 4.7E-12 93.2 8.2 82 332-414 94-179 (304)
205 3bzb_A Uncharacterized protein 98.5 2.1E-07 7.1E-12 90.7 9.3 82 331-414 77-174 (281)
206 3g5l_A Putative S-adenosylmeth 98.5 2.4E-07 8.1E-12 87.9 9.5 81 325-412 36-116 (253)
207 3mq2_A 16S rRNA methyltransfer 98.5 7.9E-08 2.7E-12 89.3 5.9 84 326-413 20-107 (218)
208 3sm3_A SAM-dependent methyltra 98.5 2.3E-07 7.8E-12 86.4 9.0 76 332-411 29-108 (235)
209 2ex4_A Adrenal gland protein A 98.5 1.6E-07 5.4E-12 88.7 8.0 75 333-411 79-153 (241)
210 2nyu_A Putative ribosomal RNA 98.5 2.2E-07 7.4E-12 84.5 8.4 77 331-419 20-112 (196)
211 1xtp_A LMAJ004091AAA; SGPP, st 98.5 3E-07 1E-11 86.9 9.7 82 324-411 84-165 (254)
212 1uir_A Polyamine aminopropyltr 98.5 1.6E-07 5.5E-12 93.2 8.1 83 332-415 76-162 (314)
213 2r3s_A Uncharacterized protein 98.5 4E-07 1.4E-11 90.1 10.9 97 310-410 140-238 (335)
214 3cvo_A Methyltransferase-like 98.5 3.3E-07 1.1E-11 85.3 9.6 78 332-413 29-131 (202)
215 3hnr_A Probable methyltransfer 98.5 1.2E-07 3.9E-12 88.0 6.4 76 327-412 39-114 (220)
216 2pxx_A Uncharacterized protein 98.5 3.1E-07 1.1E-11 84.2 9.3 77 332-414 41-117 (215)
217 3ccf_A Cyclopropane-fatty-acyl 98.5 1.9E-07 6.4E-12 90.3 7.9 78 324-412 48-125 (279)
218 2xyq_A Putative 2'-O-methyl tr 98.5 2.1E-07 7.2E-12 91.4 8.0 74 329-420 59-139 (290)
219 3htx_A HEN1; HEN1, small RNA m 98.5 2.3E-07 7.9E-12 101.8 8.9 85 324-410 712-802 (950)
220 3lcc_A Putative methyl chlorid 98.5 1.6E-07 5.5E-12 88.2 6.7 73 334-411 67-139 (235)
221 1y8c_A S-adenosylmethionine-de 98.5 3.4E-07 1.2E-11 85.8 8.8 73 333-412 37-109 (246)
222 2p8j_A S-adenosylmethionine-de 98.5 4.5E-07 1.5E-11 83.1 9.0 77 330-411 20-96 (209)
223 3ege_A Putative methyltransfer 98.5 1.9E-07 6.5E-12 89.5 6.7 81 321-412 22-102 (261)
224 1qzz_A RDMB, aclacinomycin-10- 98.4 9.5E-07 3.2E-11 89.0 12.1 89 318-411 167-255 (374)
225 3bkw_A MLL3908 protein, S-aden 98.4 4.9E-07 1.7E-11 84.8 9.0 83 324-413 34-116 (243)
226 3d2l_A SAM-dependent methyltra 98.4 5.2E-07 1.8E-11 84.6 8.9 73 332-412 32-104 (243)
227 3gjy_A Spermidine synthase; AP 98.4 3.3E-07 1.1E-11 91.1 7.8 79 335-415 91-170 (317)
228 3cgg_A SAM-dependent methyltra 98.4 6.3E-07 2.2E-11 80.6 9.0 74 331-414 44-117 (195)
229 3thr_A Glycine N-methyltransfe 98.4 4.6E-07 1.6E-11 87.8 8.5 85 323-410 47-136 (293)
230 1qyr_A KSGA, high level kasuga 98.4 2.8E-07 9.5E-12 88.8 6.8 91 320-416 8-102 (252)
231 3h2b_A SAM-dependent methyltra 98.4 7.4E-07 2.5E-11 81.5 9.3 68 334-411 42-109 (203)
232 3e23_A Uncharacterized protein 98.4 7.2E-07 2.5E-11 82.2 8.8 70 330-411 40-109 (211)
233 2wa2_A Non-structural protein 98.4 6.5E-08 2.2E-12 94.4 1.7 76 330-413 79-157 (276)
234 2oxt_A Nucleoside-2'-O-methylt 98.4 5.6E-08 1.9E-12 94.4 1.1 74 330-413 71-149 (265)
235 4azs_A Methyltransferase WBDD; 98.4 6.2E-07 2.1E-11 96.1 9.3 80 333-422 66-146 (569)
236 2p7i_A Hypothetical protein; p 98.4 5.7E-07 2E-11 84.2 7.6 71 331-411 40-110 (250)
237 2vdw_A Vaccinia virus capping 98.4 1.1E-06 3.7E-11 86.8 9.7 76 333-410 48-135 (302)
238 3ufb_A Type I restriction-modi 98.4 1.5E-06 5E-11 92.4 11.3 105 312-417 196-315 (530)
239 3l8d_A Methyltransferase; stru 98.4 8.2E-07 2.8E-11 83.3 8.4 72 332-411 52-123 (242)
240 2qfm_A Spermine synthase; sper 98.3 3.5E-07 1.2E-11 92.2 5.9 80 333-414 188-277 (364)
241 1tw3_A COMT, carminomycin 4-O- 98.3 1.6E-06 5.5E-11 86.9 10.7 84 323-411 173-256 (360)
242 1x19_A CRTF-related protein; m 98.3 1.8E-06 6.1E-11 86.7 10.8 87 320-411 177-263 (359)
243 3i9f_A Putative type 11 methyl 98.3 5.1E-07 1.8E-11 80.2 6.1 73 327-412 11-83 (170)
244 3mcz_A O-methyltransferase; ad 98.3 1.9E-06 6.5E-11 86.1 10.1 84 325-410 170-254 (352)
245 3bgv_A MRNA CAP guanine-N7 met 98.3 1.5E-06 5.1E-11 85.5 9.1 78 332-411 33-121 (313)
246 3pfg_A N-methyltransferase; N, 98.3 7.5E-07 2.6E-11 85.1 6.7 69 332-411 49-117 (263)
247 3e8s_A Putative SAM dependent 98.3 7.6E-07 2.6E-11 82.2 6.5 78 326-413 45-125 (227)
248 3dli_A Methyltransferase; PSI- 98.3 1.1E-06 3.6E-11 82.9 7.3 69 331-411 39-108 (240)
249 3gwz_A MMCR; methyltransferase 98.3 2.9E-06 9.8E-11 85.8 11.0 83 323-410 192-274 (369)
250 3ggd_A SAM-dependent methyltra 98.3 1.5E-06 5.1E-11 81.9 8.2 79 330-415 53-135 (245)
251 4hg2_A Methyltransferase type 98.3 5.5E-07 1.9E-11 86.9 4.7 67 333-410 39-105 (257)
252 2aot_A HMT, histamine N-methyl 98.2 1.8E-06 6.3E-11 84.0 8.2 80 331-410 50-141 (292)
253 2ip2_A Probable phenazine-spec 98.2 1.6E-06 5.5E-11 86.0 7.9 95 310-411 146-240 (334)
254 3bxo_A N,N-dimethyltransferase 98.2 3.4E-06 1.2E-10 78.7 9.6 68 332-410 39-106 (239)
255 1p91_A Ribosomal RNA large sub 98.2 2.6E-06 8.9E-11 81.5 8.9 72 332-411 84-155 (269)
256 4auk_A Ribosomal RNA large sub 98.2 9.4E-07 3.2E-11 89.1 5.8 78 331-420 209-286 (375)
257 3frh_A 16S rRNA methylase; met 98.2 3.4E-06 1.2E-10 80.4 9.2 71 332-410 104-174 (253)
258 3s1s_A Restriction endonucleas 98.2 2E-06 6.8E-11 94.3 8.3 85 332-417 320-412 (878)
259 2gs9_A Hypothetical protein TT 98.2 2.3E-06 8E-11 78.6 7.4 68 333-412 36-103 (211)
260 2cmg_A Spermidine synthase; tr 98.2 1.6E-06 5.6E-11 83.8 6.6 74 333-413 72-148 (262)
261 3dp7_A SAM-dependent methyltra 98.2 4.9E-06 1.7E-10 83.8 10.1 77 332-410 178-254 (363)
262 2avn_A Ubiquinone/menaquinone 98.1 4.9E-06 1.7E-10 79.5 8.7 69 333-412 54-122 (260)
263 2a14_A Indolethylamine N-methy 98.1 8.6E-07 2.9E-11 85.2 3.2 80 330-411 52-163 (263)
264 3i53_A O-methyltransferase; CO 98.1 6.4E-06 2.2E-10 81.7 9.6 77 329-410 165-241 (332)
265 3lcv_B Sisomicin-gentamicin re 98.1 2.5E-06 8.4E-11 82.2 5.9 73 333-410 132-204 (281)
266 2i62_A Nicotinamide N-methyltr 98.1 1.1E-06 3.7E-11 83.5 3.4 80 330-411 53-164 (265)
267 2px2_A Genome polyprotein [con 98.1 1.2E-06 4.2E-11 83.6 3.6 78 331-419 71-153 (269)
268 3cc8_A Putative methyltransfer 98.1 4.4E-06 1.5E-10 77.2 6.7 75 326-412 26-101 (230)
269 2oo3_A Protein involved in cat 98.1 1.5E-06 5E-11 84.6 3.4 78 333-416 91-171 (283)
270 3p8z_A Mtase, non-structural p 98.0 1E-05 3.4E-10 76.3 6.9 82 330-417 75-158 (267)
271 3hp7_A Hemolysin, putative; st 98.0 2.7E-05 9.3E-10 76.3 10.3 82 329-417 80-164 (291)
272 1af7_A Chemotaxis receptor met 98.0 9.4E-06 3.2E-10 79.0 6.9 78 333-410 105-219 (274)
273 3sso_A Methyltransferase; macr 97.9 8.3E-06 2.8E-10 83.3 6.2 70 333-412 216-296 (419)
274 3g7u_A Cytosine-specific methy 97.9 1.9E-05 6.6E-10 80.2 8.4 81 335-423 3-90 (376)
275 2c7p_A Modification methylase 97.9 2.7E-05 9.2E-10 77.7 9.3 80 334-423 11-90 (327)
276 2qe6_A Uncharacterized protein 97.9 4.4E-05 1.5E-09 74.0 10.4 75 332-410 76-163 (274)
277 2g72_A Phenylethanolamine N-me 97.9 1.1E-05 3.7E-10 78.2 5.8 78 332-411 70-181 (289)
278 3opn_A Putative hemolysin; str 97.8 5.8E-06 2E-10 78.4 2.9 78 333-417 37-116 (232)
279 1g55_A DNA cytosine methyltran 97.8 1.8E-05 6.2E-10 79.4 6.3 83 335-423 3-87 (343)
280 4e2x_A TCAB9; kijanose, tetron 97.8 9.8E-06 3.4E-10 82.9 3.6 80 324-411 98-178 (416)
281 2wk1_A NOVP; transferase, O-me 97.7 6.2E-05 2.1E-09 73.5 8.5 82 332-413 105-218 (282)
282 1vlm_A SAM-dependent methyltra 97.7 2.3E-05 8E-10 72.6 5.2 64 333-412 47-110 (219)
283 3lst_A CALO1 methyltransferase 97.7 1.8E-05 6.1E-10 79.1 4.3 80 323-410 174-253 (348)
284 3giw_A Protein of unknown func 97.7 2.7E-05 9.3E-10 75.7 5.1 63 334-397 79-143 (277)
285 2zfu_A Nucleomethylin, cerebra 97.6 4.2E-05 1.5E-09 70.3 4.9 65 324-411 58-122 (215)
286 4gqb_A Protein arginine N-meth 97.6 0.00013 4.5E-09 78.6 8.9 76 334-412 358-436 (637)
287 2qy6_A UPF0209 protein YFCK; s 97.5 0.00014 4.9E-09 69.9 7.8 89 331-426 58-190 (257)
288 3o4f_A Spermidine synthase; am 97.5 0.00025 8.4E-09 69.5 8.5 85 328-414 79-167 (294)
289 4a6d_A Hydroxyindole O-methylt 97.4 0.00027 9.3E-09 70.8 8.1 84 321-410 167-250 (353)
290 3lkz_A Non-structural protein 97.4 0.00022 7.6E-09 69.3 6.8 82 330-418 91-173 (321)
291 3ua3_A Protein arginine N-meth 97.3 0.0003 1E-08 76.1 7.5 79 334-413 410-504 (745)
292 3gcz_A Polyprotein; flavivirus 97.2 6.9E-05 2.3E-09 72.6 1.2 82 331-419 88-170 (282)
293 1fp1_D Isoliquiritigenin 2'-O- 97.2 0.00033 1.1E-08 70.5 6.2 72 326-410 201-273 (372)
294 3ubt_Y Modification methylase 97.1 0.00078 2.7E-08 66.5 7.9 80 335-423 1-80 (331)
295 2k4m_A TR8_protein, UPF0146 pr 97.1 0.00025 8.4E-09 62.2 3.5 64 332-413 34-99 (153)
296 2qrv_A DNA (cytosine-5)-methyl 97.1 0.0008 2.7E-08 66.0 7.6 83 332-421 14-100 (295)
297 3eld_A Methyltransferase; flav 97.1 0.00081 2.8E-08 65.5 7.5 81 332-419 80-161 (300)
298 1fp2_A Isoflavone O-methyltran 97.1 0.0006 2.1E-08 68.0 6.5 67 331-410 186-252 (352)
299 3reo_A (ISO)eugenol O-methyltr 97.1 0.00046 1.6E-08 69.5 5.5 72 326-410 195-267 (368)
300 3evf_A RNA-directed RNA polyme 97.1 0.00011 3.6E-09 71.1 0.7 83 331-419 72-154 (277)
301 2zig_A TTHA0409, putative modi 97.1 0.0015 5E-08 63.9 8.8 59 332-394 234-292 (297)
302 4h0n_A DNMT2; SAH binding, tra 97.0 0.00067 2.3E-08 67.7 6.3 81 335-422 4-87 (333)
303 3p9c_A Caffeic acid O-methyltr 97.0 0.00065 2.2E-08 68.3 5.8 73 325-410 192-265 (364)
304 3qv2_A 5-cytosine DNA methyltr 97.0 0.00057 1.9E-08 68.0 5.1 76 334-417 10-89 (327)
305 1zg3_A Isoflavanone 4'-O-methy 96.8 0.00066 2.2E-08 67.9 4.0 68 331-411 191-258 (358)
306 2py6_A Methyltransferase FKBM; 96.8 0.0039 1.3E-07 63.8 9.5 66 329-394 222-291 (409)
307 1i4w_A Mitochondrial replicati 96.8 0.0032 1.1E-07 63.2 8.5 81 313-398 31-118 (353)
308 3me5_A Cytosine-specific methy 96.7 0.0022 7.4E-08 67.1 6.7 84 334-422 88-187 (482)
309 3c6k_A Spermine synthase; sper 96.7 0.0015 5.2E-08 66.0 5.3 81 332-414 204-294 (381)
310 3r24_A NSP16, 2'-O-methyl tran 96.6 0.0037 1.3E-07 60.8 7.2 72 330-419 106-184 (344)
311 1g60_A Adenine-specific methyl 96.6 0.0028 9.5E-08 60.7 6.2 49 332-383 211-259 (260)
312 2ld4_A Anamorsin; methyltransf 96.5 0.00083 2.9E-08 59.6 2.3 60 329-410 8-69 (176)
313 4dkj_A Cytosine-specific methy 95.3 0.027 9.1E-07 57.5 7.0 90 335-424 11-145 (403)
314 3swr_A DNA (cytosine-5)-methyl 94.9 0.071 2.4E-06 60.3 9.8 81 334-422 540-636 (1002)
315 4ft4_B DNA (cytosine-5)-methyl 94.6 0.093 3.2E-06 57.9 9.4 46 333-378 211-260 (784)
316 3av4_A DNA (cytosine-5)-methyl 93.3 0.23 7.8E-06 57.7 9.7 81 334-422 851-947 (1330)
317 3s2e_A Zinc-containing alcohol 93.1 0.17 5.7E-06 49.7 7.2 80 326-412 159-240 (340)
318 1boo_A Protein (N-4 cytosine-s 92.6 0.091 3.1E-06 51.8 4.5 64 331-399 250-313 (323)
319 1eg2_A Modification methylase 92.6 0.12 4.2E-06 50.8 5.5 49 331-382 240-291 (319)
320 1pl8_A Human sorbitol dehydrog 91.7 0.28 9.7E-06 48.5 6.9 54 327-385 165-219 (356)
321 3pvc_A TRNA 5-methylaminomethy 91.6 0.079 2.7E-06 57.6 2.9 89 333-426 58-188 (689)
322 4ej6_A Putative zinc-binding d 91.3 0.38 1.3E-05 48.0 7.5 54 327-385 176-230 (370)
323 1f8f_A Benzyl alcohol dehydrog 91.3 0.33 1.1E-05 48.2 7.0 54 327-385 184-238 (371)
324 3vyw_A MNMC2; tRNA wobble urid 91.2 0.56 1.9E-05 45.9 8.3 88 334-426 97-203 (308)
325 3two_A Mannitol dehydrogenase; 91.2 0.5 1.7E-05 46.4 8.1 70 327-410 170-240 (348)
326 1uuf_A YAHK, zinc-type alcohol 90.5 0.67 2.3E-05 46.1 8.4 51 329-385 190-241 (369)
327 3fpc_A NADP-dependent alcohol 90.0 0.34 1.1E-05 47.8 5.6 55 326-385 159-214 (352)
328 2dph_A Formaldehyde dismutase; 89.7 0.55 1.9E-05 47.1 7.0 52 327-383 179-231 (398)
329 1piw_A Hypothetical zinc-type 88.1 0.64 2.2E-05 46.0 6.1 51 329-385 175-226 (360)
330 4eez_A Alcohol dehydrogenase 1 88.1 1.3 4.5E-05 43.2 8.3 81 327-412 157-240 (348)
331 1kol_A Formaldehyde dehydrogen 87.6 1.1 3.9E-05 44.7 7.7 53 327-384 179-232 (398)
332 1rjw_A ADH-HT, alcohol dehydro 85.2 1.1 3.7E-05 43.9 5.9 51 328-384 159-210 (339)
333 4a2c_A Galactitol-1-phosphate 85.2 1.6 5.6E-05 42.5 7.2 56 325-385 152-208 (346)
334 3goh_A Alcohol dehydrogenase, 84.4 1 3.6E-05 43.4 5.3 68 327-409 136-204 (315)
335 3tos_A CALS11; methyltransfera 83.9 2.7 9.1E-05 40.0 7.7 81 334-414 70-192 (257)
336 1e3j_A NADP(H)-dependent ketos 83.0 2.5 8.5E-05 41.4 7.5 53 327-385 162-215 (352)
337 3gms_A Putative NADPH:quinone 82.9 0.95 3.2E-05 44.2 4.3 53 327-385 138-192 (340)
338 3ip1_A Alcohol dehydrogenase, 82.2 1.4 4.6E-05 44.4 5.3 51 330-385 210-261 (404)
339 4dvj_A Putative zinc-dependent 81.9 1.6 5.5E-05 43.2 5.6 48 333-385 171-220 (363)
340 3jv7_A ADH-A; dehydrogenase, n 81.8 2.7 9.2E-05 41.0 7.2 51 330-385 168-219 (345)
341 3m6i_A L-arabinitol 4-dehydrog 81.7 2.7 9.2E-05 41.3 7.2 50 327-377 173-223 (363)
342 2h6e_A ADH-4, D-arabinose 1-de 81.1 3 0.0001 40.7 7.2 51 330-385 168-219 (344)
343 2efj_A 3,7-dimethylxanthine me 80.6 6.3 0.00022 39.6 9.5 89 334-428 53-170 (384)
344 1p0f_A NADP-dependent alcohol 79.6 2.7 9.3E-05 41.5 6.4 54 327-385 185-239 (373)
345 1cdo_A Alcohol dehydrogenase; 79.5 2.9 9.9E-05 41.3 6.6 53 328-385 187-240 (374)
346 1e3i_A Alcohol dehydrogenase, 79.0 3 0.0001 41.2 6.6 53 328-385 190-243 (376)
347 2jhf_A Alcohol dehydrogenase E 79.0 3.1 0.00011 41.1 6.6 53 328-385 186-239 (374)
348 1xu9_A Corticosteroid 11-beta- 78.9 5.9 0.0002 37.3 8.3 76 334-411 28-113 (286)
349 2zig_A TTHA0409, putative modi 78.7 1.7 5.8E-05 41.8 4.5 40 386-425 21-61 (297)
350 3uko_A Alcohol dehydrogenase c 78.6 2.4 8.1E-05 42.1 5.6 54 327-385 187-241 (378)
351 3ic5_A Putative saccharopine d 78.6 5 0.00017 31.7 6.7 70 333-413 4-78 (118)
352 2fzw_A Alcohol dehydrogenase c 78.5 3.1 0.00011 41.0 6.4 54 327-385 184-238 (373)
353 3ps9_A TRNA 5-methylaminomethy 78.3 7.6 0.00026 41.6 9.9 88 334-426 67-196 (676)
354 3tjr_A Short chain dehydrogena 77.6 6.2 0.00021 37.7 8.1 84 333-419 30-123 (301)
355 2c07_A 3-oxoacyl-(acyl-carrier 77.6 12 0.0004 35.1 10.0 80 334-416 44-133 (285)
356 3fbg_A Putative arginate lyase 77.5 3.3 0.00011 40.5 6.2 47 333-385 150-198 (346)
357 3uog_A Alcohol dehydrogenase; 76.9 4 0.00014 40.2 6.7 52 328-385 184-236 (363)
358 4fs3_A Enoyl-[acyl-carrier-pro 76.7 8.6 0.0003 35.7 8.7 86 333-419 5-101 (256)
359 3lyl_A 3-oxoacyl-(acyl-carrier 76.3 15 0.00052 33.4 10.2 82 334-418 5-96 (247)
360 2cf5_A Atccad5, CAD, cinnamyl 76.3 5.8 0.0002 38.9 7.7 74 329-410 175-250 (357)
361 1vj0_A Alcohol dehydrogenase, 76.0 5.2 0.00018 39.6 7.3 54 327-385 188-243 (380)
362 3llv_A Exopolyphosphatase-rela 75.5 9.1 0.00031 31.7 7.7 70 334-413 6-79 (141)
363 2c0c_A Zinc binding alcohol de 75.4 4.8 0.00017 39.6 6.8 52 328-385 158-211 (362)
364 2uvd_A 3-oxoacyl-(acyl-carrier 75.1 11 0.00037 34.5 8.8 80 334-416 4-94 (246)
365 3jyn_A Quinone oxidoreductase; 72.9 3.6 0.00012 39.7 5.1 51 329-385 136-188 (325)
366 1fmc_A 7 alpha-hydroxysteroid 72.6 12 0.0004 34.1 8.4 80 334-416 11-100 (255)
367 1yqd_A Sinapyl alcohol dehydro 71.9 10 0.00035 37.2 8.3 75 328-410 181-257 (366)
368 1xa0_A Putative NADPH dependen 71.6 4.1 0.00014 39.3 5.2 51 329-385 144-197 (328)
369 3nzo_A UDP-N-acetylglucosamine 71.1 14 0.00048 36.7 9.2 82 334-416 35-124 (399)
370 3rku_A Oxidoreductase YMR226C; 70.8 19 0.00066 33.9 9.7 80 334-414 33-125 (287)
371 3o26_A Salutaridine reductase; 70.7 9.7 0.00033 35.7 7.5 81 334-416 12-103 (311)
372 4eye_A Probable oxidoreductase 70.6 4.1 0.00014 39.7 4.9 53 327-385 153-207 (342)
373 1ja9_A 4HNR, 1,3,6,8-tetrahydr 69.9 12 0.00043 34.3 8.0 80 333-415 20-110 (274)
374 4g81_D Putative hexonate dehyd 69.8 17 0.00058 34.2 8.9 83 333-418 8-100 (255)
375 1xg5_A ARPG836; short chain de 69.7 23 0.0008 32.8 9.9 79 334-413 32-120 (279)
376 1m6e_X S-adenosyl-L-methionnin 69.6 1.9 6.4E-05 43.1 2.2 90 334-426 52-158 (359)
377 1iz0_A Quinone oxidoreductase; 69.4 4.7 0.00016 38.4 4.9 49 331-385 123-173 (302)
378 3pk0_A Short-chain dehydrogena 69.3 12 0.00041 34.7 7.7 82 333-416 9-100 (262)
379 2d8a_A PH0655, probable L-thre 69.1 7.8 0.00027 37.7 6.6 51 328-384 163-214 (348)
380 1ae1_A Tropinone reductase-I; 67.8 25 0.00087 32.6 9.7 80 333-415 20-110 (273)
381 1h2b_A Alcohol dehydrogenase; 67.5 12 0.00041 36.6 7.6 52 329-385 182-234 (359)
382 3fwz_A Inner membrane protein 67.0 8 0.00027 32.3 5.4 71 334-414 7-81 (140)
383 2b5w_A Glucose dehydrogenase; 66.9 6.2 0.00021 38.6 5.3 52 328-384 161-224 (357)
384 3h7a_A Short chain dehydrogena 66.5 14 0.00049 34.0 7.5 83 333-419 6-98 (252)
385 1pqw_A Polyketide synthase; ro 66.5 7.3 0.00025 34.3 5.3 51 328-384 33-85 (198)
386 3t4x_A Oxidoreductase, short c 66.1 29 0.001 32.0 9.7 85 333-418 9-99 (267)
387 1y1p_A ARII, aldehyde reductas 66.1 33 0.0011 32.3 10.3 82 333-416 10-95 (342)
388 1mxh_A Pteridine reductase 2; 66.0 21 0.00072 33.0 8.7 80 334-416 11-106 (276)
389 3iup_A Putative NADPH:quinone 65.7 2.8 9.5E-05 41.7 2.5 48 332-385 169-219 (379)
390 3nx4_A Putative oxidoreductase 65.4 7 0.00024 37.5 5.3 50 330-385 142-194 (324)
391 3ftp_A 3-oxoacyl-[acyl-carrier 65.4 18 0.00062 33.7 8.1 84 333-419 27-120 (270)
392 1jvb_A NAD(H)-dependent alcoho 65.3 13 0.00045 36.0 7.4 52 328-384 165-218 (347)
393 2hcy_A Alcohol dehydrogenase 1 64.8 10 0.00034 36.9 6.4 51 328-384 164-216 (347)
394 3o38_A Short chain dehydrogena 64.7 26 0.00089 32.2 9.0 84 333-418 21-115 (266)
395 2dq4_A L-threonine 3-dehydroge 64.6 5.8 0.0002 38.6 4.6 47 328-376 160-207 (343)
396 3b5i_A S-adenosyl-L-methionine 64.5 14 0.00048 36.9 7.4 91 334-427 53-170 (374)
397 3ioy_A Short-chain dehydrogena 64.3 29 0.001 33.2 9.6 82 333-415 7-98 (319)
398 3imf_A Short chain dehydrogena 64.2 16 0.00054 33.7 7.4 79 334-415 6-94 (257)
399 1tt7_A YHFP; alcohol dehydroge 63.9 5.5 0.00019 38.4 4.3 51 329-385 145-198 (330)
400 2eih_A Alcohol dehydrogenase; 63.7 13 0.00044 36.0 7.0 50 329-384 162-213 (343)
401 3tfo_A Putative 3-oxoacyl-(acy 63.6 17 0.00057 34.0 7.5 79 334-415 4-92 (264)
402 3afn_B Carbonyl reductase; alp 63.5 12 0.0004 34.1 6.3 78 334-414 7-95 (258)
403 2ae2_A Protein (tropinone redu 63.4 29 0.001 31.8 9.1 80 333-415 8-98 (260)
404 2ph3_A 3-oxoacyl-[acyl carrier 63.1 22 0.00074 32.0 8.0 80 336-418 3-94 (245)
405 3awd_A GOX2181, putative polyo 63.0 37 0.0013 30.8 9.7 79 333-414 12-100 (260)
406 1edo_A Beta-keto acyl carrier 63.0 21 0.00071 32.2 7.9 79 335-416 2-91 (244)
407 2hq1_A Glucose/ribitol dehydro 63.0 14 0.00048 33.4 6.7 80 334-416 5-95 (247)
408 3ius_A Uncharacterized conserv 62.4 25 0.00087 32.4 8.6 67 335-414 6-73 (286)
409 3rih_A Short chain dehydrogena 62.2 13 0.00045 35.3 6.5 81 334-416 41-131 (293)
410 3sju_A Keto reductase; short-c 62.0 28 0.00097 32.5 8.8 84 334-420 24-117 (279)
411 4b7c_A Probable oxidoreductase 61.7 11 0.00038 36.3 6.0 54 327-385 143-198 (336)
412 1lss_A TRK system potassium up 61.6 18 0.00062 29.2 6.6 71 334-413 4-78 (140)
413 3ucx_A Short chain dehydrogena 61.2 43 0.0015 30.8 9.9 77 333-412 10-96 (264)
414 4fn4_A Short chain dehydrogena 61.1 39 0.0013 31.6 9.5 78 333-413 6-93 (254)
415 2cfc_A 2-(R)-hydroxypropyl-COM 61.0 14 0.00048 33.5 6.3 79 334-415 2-91 (250)
416 4egf_A L-xylulose reductase; s 60.8 27 0.00094 32.2 8.4 82 334-418 20-112 (266)
417 3krt_A Crotonyl COA reductase; 60.6 6.9 0.00023 39.8 4.4 51 329-385 224-276 (456)
418 2jah_A Clavulanic acid dehydro 59.8 46 0.0016 30.2 9.7 79 334-415 7-95 (247)
419 4a0s_A Octenoyl-COA reductase/ 59.4 7.5 0.00026 39.3 4.5 51 329-385 216-268 (447)
420 1v3u_A Leukotriene B4 12- hydr 59.2 16 0.00054 35.1 6.6 52 327-384 139-192 (333)
421 2j3h_A NADP-dependent oxidored 59.1 13 0.00045 35.9 6.0 53 327-384 149-203 (345)
422 3rkr_A Short chain oxidoreduct 59.0 33 0.0011 31.5 8.6 79 333-414 28-116 (262)
423 4ibo_A Gluconate dehydrogenase 58.8 31 0.0011 32.1 8.4 82 333-417 25-116 (271)
424 3c85_A Putative glutathione-re 58.7 35 0.0012 29.4 8.3 70 334-413 39-114 (183)
425 3lf2_A Short chain oxidoreduct 58.5 50 0.0017 30.3 9.8 83 334-418 8-101 (265)
426 3r1i_A Short-chain type dehydr 58.5 27 0.00094 32.6 8.0 84 333-419 31-124 (276)
427 1oaa_A Sepiapterin reductase; 58.4 53 0.0018 29.9 9.9 79 334-413 6-101 (259)
428 1yb1_A 17-beta-hydroxysteroid 58.4 37 0.0013 31.4 8.9 80 333-415 30-119 (272)
429 4da9_A Short-chain dehydrogena 58.3 42 0.0014 31.3 9.3 79 333-414 28-117 (280)
430 3oig_A Enoyl-[acyl-carrier-pro 57.8 19 0.00066 33.1 6.7 83 333-416 6-99 (266)
431 3t8y_A CHEB, chemotaxis respon 57.5 8.4 0.00029 32.6 3.8 73 342-415 9-82 (164)
432 3gaf_A 7-alpha-hydroxysteroid 57.3 34 0.0012 31.4 8.4 85 333-420 11-105 (256)
433 3qwb_A Probable quinone oxidor 57.2 16 0.00053 35.2 6.2 51 329-385 144-196 (334)
434 3svt_A Short-chain type dehydr 56.9 48 0.0017 30.7 9.5 81 333-414 10-101 (281)
435 4g65_A TRK system potassium up 56.9 16 0.00054 37.5 6.4 68 334-410 3-74 (461)
436 1xq1_A Putative tropinone redu 56.6 35 0.0012 31.1 8.4 78 334-414 14-102 (266)
437 3qiv_A Short-chain dehydrogena 56.1 26 0.0009 31.8 7.3 79 333-414 8-96 (253)
438 2rhc_B Actinorhodin polyketide 56.0 56 0.0019 30.2 9.8 80 333-415 21-110 (277)
439 2bd0_A Sepiapterin reductase; 55.8 32 0.0011 30.9 7.8 77 335-414 3-96 (244)
440 1geg_A Acetoin reductase; SDR 55.8 53 0.0018 29.9 9.4 78 335-415 3-90 (256)
441 2gn4_A FLAA1 protein, UDP-GLCN 55.7 17 0.00059 35.1 6.2 77 333-414 20-101 (344)
442 3osu_A 3-oxoacyl-[acyl-carrier 55.4 43 0.0015 30.3 8.7 83 334-419 4-97 (246)
443 3cxt_A Dehydrogenase with diff 55.1 61 0.0021 30.4 9.9 80 333-415 33-122 (291)
444 2zat_A Dehydrogenase/reductase 55.1 34 0.0012 31.2 8.0 79 333-414 13-101 (260)
445 3grk_A Enoyl-(acyl-carrier-pro 55.1 46 0.0016 31.3 9.1 81 332-415 29-120 (293)
446 1xhl_A Short-chain dehydrogena 55.0 29 0.001 32.8 7.6 81 334-415 26-117 (297)
447 3to5_A CHEY homolog; alpha(5)b 54.9 10 0.00036 31.8 3.9 66 354-421 8-77 (134)
448 3o8q_A Shikimate 5-dehydrogena 54.9 62 0.0021 30.6 9.9 74 333-420 125-200 (281)
449 3tqh_A Quinone oxidoreductase; 54.7 20 0.00067 34.3 6.4 73 327-410 146-221 (321)
450 3ai3_A NADPH-sorbose reductase 54.6 57 0.002 29.7 9.5 80 334-416 7-97 (263)
451 4imr_A 3-oxoacyl-(acyl-carrier 54.3 32 0.0011 32.0 7.7 81 333-416 32-121 (275)
452 2aef_A Calcium-gated potassium 54.1 44 0.0015 30.0 8.5 68 333-411 8-78 (234)
453 1zsy_A Mitochondrial 2-enoyl t 53.8 18 0.00062 35.2 6.0 56 328-385 162-219 (357)
454 4dmm_A 3-oxoacyl-[acyl-carrier 53.7 45 0.0015 30.9 8.6 84 333-419 27-121 (269)
455 2b4q_A Rhamnolipids biosynthes 53.7 52 0.0018 30.5 9.1 81 333-417 28-118 (276)
456 1zem_A Xylitol dehydrogenase; 53.6 54 0.0019 30.0 9.1 80 333-415 6-95 (262)
457 3l77_A Short-chain alcohol deh 53.6 85 0.0029 27.9 10.3 80 334-416 2-92 (235)
458 1e7w_A Pteridine reductase; di 53.5 56 0.0019 30.6 9.3 62 334-398 9-73 (291)
459 4g65_A TRK system potassium up 53.3 22 0.00075 36.3 6.8 79 324-410 223-306 (461)
460 4dry_A 3-oxoacyl-[acyl-carrier 53.0 33 0.0011 32.1 7.6 80 333-414 32-121 (281)
461 3pgx_A Carveol dehydrogenase; 52.8 46 0.0016 30.8 8.6 83 333-418 14-119 (280)
462 1w6u_A 2,4-dienoyl-COA reducta 52.8 72 0.0025 29.6 10.0 79 334-415 26-115 (302)
463 3rd5_A Mypaa.01249.C; ssgcid, 52.7 49 0.0017 30.9 8.8 77 333-415 15-97 (291)
464 1wly_A CAAR, 2-haloacrylate re 52.7 28 0.00096 33.3 7.2 51 328-384 140-192 (333)
465 2wsb_A Galactitol dehydrogenas 52.5 52 0.0018 29.6 8.7 81 333-419 10-100 (254)
466 3tsc_A Putative oxidoreductase 52.2 67 0.0023 29.6 9.6 83 333-418 10-115 (277)
467 1yb5_A Quinone oxidoreductase; 52.1 24 0.00082 34.3 6.6 51 328-384 165-217 (351)
468 3czc_A RMPB; alpha/beta sandwi 51.8 22 0.00076 28.6 5.3 66 329-415 13-78 (110)
469 2yut_A Putative short-chain ox 51.8 16 0.00055 31.9 4.9 70 337-415 3-77 (207)
470 3oec_A Carveol dehydrogenase ( 51.7 59 0.002 30.9 9.3 84 333-419 45-150 (317)
471 2qxy_A Response regulator; reg 51.5 22 0.00075 28.6 5.4 56 357-416 3-59 (142)
472 3guy_A Short-chain dehydrogena 51.5 28 0.00095 31.2 6.6 73 337-415 4-83 (230)
473 3nbm_A PTS system, lactose-spe 51.1 16 0.00056 29.6 4.4 56 333-411 5-60 (108)
474 1iy8_A Levodione reductase; ox 50.6 57 0.0019 29.9 8.7 81 333-414 12-102 (267)
475 3lua_A Response regulator rece 50.5 32 0.0011 27.6 6.3 55 358-415 4-61 (140)
476 3snk_A Response regulator CHEY 50.3 34 0.0012 27.2 6.4 54 358-414 14-69 (135)
477 3abi_A Putative uncharacterize 50.3 22 0.00075 34.9 6.0 71 334-415 16-88 (365)
478 3kht_A Response regulator; PSI 50.0 29 0.00098 28.0 5.9 57 358-415 5-62 (144)
479 1gee_A Glucose 1-dehydrogenase 49.7 44 0.0015 30.3 7.7 79 334-415 7-96 (261)
480 3v8b_A Putative dehydrogenase, 49.6 63 0.0021 30.1 9.0 80 333-415 27-116 (283)
481 3oj0_A Glutr, glutamyl-tRNA re 49.3 23 0.00077 29.5 5.2 78 325-414 12-90 (144)
482 1vl8_A Gluconate 5-dehydrogena 48.9 60 0.0021 29.9 8.7 81 333-416 20-111 (267)
483 4ina_A Saccharopine dehydrogen 48.2 37 0.0013 33.9 7.4 75 336-413 3-85 (405)
484 2qhx_A Pteridine reductase 1; 47.8 62 0.0021 31.0 8.8 62 334-398 46-110 (328)
485 4dup_A Quinone oxidoreductase; 47.7 23 0.0008 34.4 5.7 52 328-385 162-215 (353)
486 1qor_A Quinone oxidoreductase; 47.7 28 0.00097 33.2 6.3 51 328-384 135-187 (327)
487 3gqv_A Enoyl reductase; medium 47.5 24 0.00084 34.5 5.9 47 332-385 163-211 (371)
488 2vn8_A Reticulon-4-interacting 47.5 25 0.00084 34.5 5.9 48 331-385 181-230 (375)
489 3oid_A Enoyl-[acyl-carrier-pro 47.3 68 0.0023 29.3 8.7 81 334-417 4-95 (258)
490 1gu7_A Enoyl-[acyl-carrier-pro 47.1 14 0.00049 35.9 4.1 55 329-385 162-219 (364)
491 1yxm_A Pecra, peroxisomal tran 47.0 83 0.0028 29.2 9.4 82 333-415 17-111 (303)
492 2pnf_A 3-oxoacyl-[acyl-carrier 46.9 46 0.0016 29.8 7.3 80 334-416 7-97 (248)
493 1lnq_A MTHK channels, potassiu 46.9 24 0.00081 34.0 5.6 68 334-412 115-185 (336)
494 3e03_A Short chain dehydrogena 46.7 33 0.0011 31.9 6.4 83 333-418 5-104 (274)
495 3nyw_A Putative oxidoreductase 46.6 44 0.0015 30.5 7.2 86 334-420 7-103 (250)
496 3pxx_A Carveol dehydrogenase; 46.3 81 0.0028 29.0 9.1 83 333-418 9-113 (287)
497 2cdc_A Glucose dehydrogenase g 46.2 21 0.00073 34.8 5.2 51 328-384 166-229 (366)
498 1id1_A Putative potassium chan 45.7 53 0.0018 27.3 7.1 72 334-412 3-79 (153)
499 4e6p_A Probable sorbitol dehyd 45.6 97 0.0033 28.1 9.5 81 333-419 7-97 (259)
500 1xkq_A Short-chain reductase f 45.5 51 0.0018 30.5 7.6 81 334-415 6-97 (280)
No 1
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.3e-63 Score=523.30 Aligned_cols=364 Identities=24% Similarity=0.347 Sum_probs=314.7
Q ss_pred CCcHHHHHHHHHHHHHHcCCCchHHHhhcCCCCCCCcchhhhhhhccCCCCCCH-HHHHHHHHHHHHHHHhHHHHHHHHH
Q 012783 56 EVSPHRAVSAVRLMRIQFGGAFADLLNKKGKGSGDNEMGYVERTLGFRTKDLDD-RDLRLVTDIVGGTIRWRRYLDHLIC 134 (456)
Q Consensus 56 ~~~~aR~~A~~~L~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~d~~~~~~lv~gv~r~~~~lD~~i~ 134 (456)
+..++|+.|+++||+++.++.+++.++... + +...+++ +|++|+++|||||+||+..||++|+
T Consensus 9 ~~~~~R~~A~~~L~~v~~~~~~~~~~l~~~----------~------~~~~l~~~~dr~~~~~lv~gvlr~~~~ld~~i~ 72 (450)
T 2yxl_A 9 SIPPKGIRAIIEAIRLGEIIKPSQYAKREA----------F------KKHDVEEAWLNRVLTMIFYDIMKKQGLIDKVIK 72 (450)
T ss_dssp CCCHHHHHHHHHHHHHTTTSSSTHHHHHHH----------H------HHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHhcCCcHHHHHHHH----------H------HhccCCcHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 345899999999999998888888765432 1 1234777 9999999999999999999999999
Q ss_pred HhccCCCCCCcccHHHHHHHHHHHHHHHhcCCCChhHHH----HHHHHHHhhcCCCchhhHHHHHHHHHhhhcCCCCCCC
Q 012783 135 LLCHDEKTFSSMEPLLLQILRIGFYEIVKLDMPPYAVVD----ENVRLAKVALRPGAGNLVNGILRKLVLLKDNNSLPLP 210 (456)
Q Consensus 135 ~~~~~~~~~~~l~~~~~~iLrlg~yell~~~~p~~a~in----E~V~lak~~~~~~~~~fVNaVLr~i~r~~~~~~~~~~ 210 (456)
++++ .++++++++++++||+|+|||+| ++|++++|| |+|++||.++++.+++|||||||++.+.+. ..
T Consensus 73 ~~~~--~~~~~~~~~~~~iLrla~yell~-~ip~~~ain~~~~eaVelak~~~~~~~~~fvNgvL~~~~r~~~----~~- 144 (450)
T 2yxl_A 73 EIVG--VTPLILDPWLRAALRVAVDIALF-HDPSSQTIKNLRWKASDFISSRTHPYVGMYFWDLLDKIFEYKP----NP- 144 (450)
T ss_dssp HHHS--SCGGGSCHHHHHHHHHHHHHHHH-SCBCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTCCC----CC-
T ss_pred Hhcc--CChhhcCHHHHHHHHHHHHHHhc-CCCchHHhccccHHHHHHHHhccccccccchHHHHHHHhhccc----cc-
Confidence 9998 47889999999999999999999 999999999 999999999888889999999999998531 01
Q ss_pred cccCCchHHHHHHHHHhCChHHHHHHHHHhcCHHHHHHHHHhcC-CCCCeEEEEcCCCCCCHHHHHHHHhcCCCCceecc
Q 012783 211 KLEGNDRAQARALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNN-SDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSL 289 (456)
Q Consensus 211 ~~~~~~~~~~~~la~~~s~P~wlv~~~~~~~g~~~~~~~l~~~~-~~~p~~lRvN~~k~~s~~~~~~~L~~~gi~~~~~~ 289 (456)
. +..+.+++.||||.|++++|.+.|| +++++++++++ .++|+++|||+++ ++++++.+.|++.|+..++.+
T Consensus 145 ~------~~~~~~~~~~~~P~w~~~~~~~~~g-~~~~~~~~a~~~~~~~~~~Rvn~~k-~~~~~~~~~L~~~g~~~~~~~ 216 (450)
T 2yxl_A 145 K------NELEELEWKYLAPSWLIERVKGILG-DETEDFFRSVNKRHEWISIRVNTLK-ANVEEVIGELEEDGVEVVRSE 216 (450)
T ss_dssp C------SHHHHHHHHHTSCHHHHHHHHHHHG-GGHHHHHHHHHCCCCEEEEEECTTT-CCHHHHHHHHHHTTCCEEECS
T ss_pred c------chhhhhhhHhcCcHHHHHHHHHHhh-HHHHHHHHhcCCCCCCEEEEEcCCC-CCHHHHHHHHHhCCccceecC
Confidence 0 1246789999999999999999999 88999999999 9999999999999 799999999999999999999
Q ss_pred CCCceEEEeCCCcchhcccccccccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHH
Q 012783 290 HLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKG 369 (456)
Q Consensus 290 ~~~~~~~i~~~~~~~~~~~~~~~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~ 369 (456)
++++.+.+..+. .+...+.|.+|.+++||.+|++++..+++++|++|||+|||||++|+++++.+++.++|+|+|+++.
T Consensus 217 ~~~~~~~~~~~~-~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~ 295 (450)
T 2yxl_A 217 RVPTILKIKGPY-NFDTSSAFNEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKM 295 (450)
T ss_dssp SCTTEEEEESCC-CTTSCHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHH
T ss_pred ccCceEEeCCCC-CcccCchhhCceEEecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHH
Confidence 999999886432 4677889999999999999999999999999999999999999999999999877799999999999
Q ss_pred HHHHHHHHHHHcCCCceEEEEecccccccccCC-CCccEEEEcCCCCCCcccccCCCccccccccchhhhhhchHhHHHH
Q 012783 370 RLRILNETAKLHQVNSVIRTIHADLRTFADNST-VKCDKVLLDAPCSGLGVLSKTCVGIGDWRIWKSLRYCKTSFLMQHL 448 (456)
Q Consensus 370 rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~-~~fD~VllDaPCSg~G~irr~p~~~~~wr~~~~~~~~~~~~~~~~l 448 (456)
+++.+++|++++|+.+ +.++++|+..++.... +.||+|++||||||+|+++++||. +|+. +..........|..+
T Consensus 296 ~l~~~~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~--~~~~-~~~~~~~l~~~q~~i 371 (450)
T 2yxl_A 296 RMKRLKDFVKRMGIKI-VKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPEL--RWRL-REDKINEMSQLQREL 371 (450)
T ss_dssp HHHHHHHHHHHTTCCS-EEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTH--HHHC-CTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCc-EEEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhh--hhhC-CHHHHHHHHHHHHHH
Confidence 9999999999999986 8999999987653222 679999999999999999999998 4432 223334444556666
Q ss_pred HHHhhhcC
Q 012783 449 CETKYLLL 456 (456)
Q Consensus 449 ~~~~~~ll 456 (456)
...+..+|
T Consensus 372 L~~a~~~L 379 (450)
T 2yxl_A 372 LESAARLV 379 (450)
T ss_dssp HHHHHTTE
T ss_pred HHHHHHhc
Confidence 66665543
No 2
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=100.00 E-value=5.8e-62 Score=507.79 Aligned_cols=358 Identities=25% Similarity=0.341 Sum_probs=307.1
Q ss_pred HHHHHHHHHHHHHHcCCCchHHHhhcCCCCCCCcchhhhhhhccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhcc
Q 012783 59 PHRAVSAVRLMRIQFGGAFADLLNKKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVGGTIRWRRYLDHLICLLCH 138 (456)
Q Consensus 59 ~aR~~A~~~L~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~lv~gv~r~~~~lD~~i~~~~~ 138 (456)
.+|+.|+++||+++.++.+.+.++... ...++++|++|+++|||||+||+..||++|+++++
T Consensus 6 ~aR~~A~~~L~~~~~~~~~~~~~l~~~------------------~~~~~~~dr~~~~~lv~gvlr~~~~ld~~i~~~~~ 67 (429)
T 1sqg_A 6 NLRSMAAQAVEQVVEQGQSLSNILPPL------------------QQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 (429)
T ss_dssp CHHHHHHHHHHHHHHHCCCHHHHHHHH------------------HTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHH------------------HhhCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhcC
Confidence 499999999999988776666654321 12478999999999999999999999999999998
Q ss_pred CCCCCCcccHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHhhcCCCchhhHHHHHHHHHhhhcCCCCCCCcccCCchH
Q 012783 139 DEKTFSSMEPLLLQILRIGFYEIVKLDMPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLKDNNSLPLPKLEGNDRA 218 (456)
Q Consensus 139 ~~~~~~~l~~~~~~iLrlg~yell~~~~p~~a~inE~V~lak~~~~~~~~~fVNaVLr~i~r~~~~~~~~~~~~~~~~~~ 218 (456)
++++++++++++|||+|+|||+|+++|++++|||+|++||.++...+++|||||||++.+..+.. +. .
T Consensus 68 --~~~~~~~~~~~~iLrl~~yel~~~~~p~~~~ineaVelak~~~~~~~~~fvN~vL~~~~r~~~~~----~~------~ 135 (429)
T 1sqg_A 68 --RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEEL----LA------E 135 (429)
T ss_dssp --SCCCGGGHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHH----HH------H
T ss_pred --CChhhcCHHHHHHHHHHHHHHhhCCCCchHhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhcc----cc------c
Confidence 47889999999999999999999999999999999999999998889999999999999864321 00 0
Q ss_pred HHHHHHHHhCChHHHHHHHHHhcCHHHHHHHHHhcCCCCCeEEEEcCCCCCCHHHHHHHHhcCCCCceeccCCCceEEEe
Q 012783 219 QARALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRVK 298 (456)
Q Consensus 219 ~~~~la~~~s~P~wlv~~~~~~~g~~~~~~~l~~~~~~~p~~lRvN~~k~~s~~~~~~~L~~~gi~~~~~~~~~~~~~i~ 298 (456)
....++ .||+|.|++++|.+.|| +++++++++++.++|+++|||+++ .+++++.+.|++.|+..++.++.++.+.+.
T Consensus 136 ~~~~~~-~~~~p~w~~~~~~~~~g-~~~~~~~~~~~~~~~~~~Rvn~~~-~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 212 (429)
T 1sqg_A 136 FNASDA-RYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTH-HSRDSWLALLDEAGMKGFPHADYPDAVRLE 212 (429)
T ss_dssp HTTSGG-GGCSCHHHHHHHHHHCT-TTHHHHHHHHTSCCCEEEEECTTT-CCHHHHHHHHHHTTCCEECCTTCTTEEEES
T ss_pred chhhhh-hhcCcHHHHHHHHHHhh-HHHHHHHHhCCCCCCeEEEEcCCC-CCHHHHHHHHHhCCCceeecCCCCCEEEEC
Confidence 001245 89999999999999999 789999999999999999999999 699999999999999999999999999887
Q ss_pred CCCcchhcccccccccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHH
Q 012783 299 TGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETA 378 (456)
Q Consensus 299 ~~~~~~~~~~~~~~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~ 378 (456)
.+. .+...+.|.+|.+++||.+|++++.++++++|++|||+|||||++|+++++.+++ ++|+|+|+++.+++.+++|+
T Consensus 213 ~~~-~~~~~~~~~~G~~~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~ 290 (429)
T 1sqg_A 213 TPA-PVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNL 290 (429)
T ss_dssp SCC-CGGGSTTGGGTSEEECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHH
T ss_pred CCC-CcccChHHhCCCeEeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHH
Confidence 543 4677899999999999999999999999999999999999999999999999764 89999999999999999999
Q ss_pred HHcCCCceEEEEecccccccc-cCCCCccEEEEcCCCCCCcccccCCCccccccccchhhhhhchHhHHHHHHHhhhcC
Q 012783 379 KLHQVNSVIRTIHADLRTFAD-NSTVKCDKVLLDAPCSGLGVLSKTCVGIGDWRIWKSLRYCKTSFLMQHLCETKYLLL 456 (456)
Q Consensus 379 ~r~g~~~~V~~~~~Da~~~~~-~~~~~fD~VllDaPCSg~G~irr~p~~~~~wr~~~~~~~~~~~~~~~~l~~~~~~ll 456 (456)
+++|+. +.++++|+..++. ...++||+|++||||||+|+++++|++ +|+. +..........|..+...+..+|
T Consensus 291 ~~~g~~--~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~--~~~~-~~~~~~~l~~~q~~~L~~a~~~L 364 (429)
T 1sqg_A 291 KRLGMK--ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDI--KWLR-RDRDIPELAQLQSEILDAIWPHL 364 (429)
T ss_dssp HHTTCC--CEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTH--HHHC-CTTHHHHHHHHHHHHHHHHGGGE
T ss_pred HHcCCC--eEEEeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcch--hhcC-CHHHHHHHHHHHHHHHHHHHHhc
Confidence 999985 6789999987653 223589999999999999999999998 4432 23334444456667766666553
No 3
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=2.6e-41 Score=338.42 Aligned_cols=232 Identities=25% Similarity=0.304 Sum_probs=197.7
Q ss_pred HHHHHHHHHhCChHHHHHHHHHhcCHHHHHHHHHhcCCCCCeEEEEcCCCCCCHHHHHHHHhcCCCCceeccCCCceEEE
Q 012783 218 AQARALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRV 297 (456)
Q Consensus 218 ~~~~~la~~~s~P~wlv~~~~~~~g~~~~~~~l~~~~~~~p~~lRvN~~k~~s~~~~~~~L~~~gi~~~~~~~~~~~~~i 297 (456)
++.++|++.||||.||+++|.+.|| +++++++++++.++|+++|||++| ++++++.+.|++.|+.+++.+|.++.+.+
T Consensus 5 ~~~~~l~~~~~~P~w~~~~~~~~~g-~~~~~~~~~~~~~~p~~~RvN~~k-~~~~~~~~~L~~~g~~~~~~~~~~~~~~~ 82 (315)
T 1ixk_A 5 PSMLDKLLRLGYSKLFADRYFQLWG-ERAIRIAEAMEKPLPRCFRVNTLK-ISVQDLVKRLNKKGFQFKRVPWAKEGFCL 82 (315)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHT-THHHHHHHHTTSCCCCEEEECTTT-SCHHHHHHHHHHTTCEEEEETTEEEEEEE
T ss_pred cHHHHHHHHhCCcHHHHHHHHHHcc-HHHHHHHHHcCCCCCeEEEEeCCC-CCHHHHHHHHHhCCCeeeECCCCCceEEE
Confidence 3578899999999999999999999 889999999999999999999999 79999999999999999999998888887
Q ss_pred eCCCcchhcccccccccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHH
Q 012783 298 KTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNET 377 (456)
Q Consensus 298 ~~~~~~~~~~~~~~~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n 377 (456)
..+...+...+.|.+|.+++||.+|++++..+++++|++|||+|||||++|+++++.+++.++|+|+|+++.+++.+++|
T Consensus 83 ~~~~~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~ 162 (315)
T 1ixk_A 83 TREPFSITSTPEFLTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLN 162 (315)
T ss_dssp EECSSCGGGSHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHH
T ss_pred eCCCCCcccChhHhcceEEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHH
Confidence 64433477789999999999999999999999999999999999999999999999987789999999999999999999
Q ss_pred HHHcCCCceEEEEecccccccccCCCCccEEEEcCCCCCCcccccCCCccccccccchhhhhhchHhHHHHHHHhhhcC
Q 012783 378 AKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKTCVGIGDWRIWKSLRYCKTSFLMQHLCETKYLLL 456 (456)
Q Consensus 378 ~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllDaPCSg~G~irr~p~~~~~wr~~~~~~~~~~~~~~~~l~~~~~~ll 456 (456)
++++|+.+ +.++++|+..++.. .+.||+|++|+||||+|+++++||+...|.. .........|..+.+.++++|
T Consensus 163 ~~~~g~~~-v~~~~~D~~~~~~~-~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~---~~~~~~~~~q~~~L~~~~~~L 236 (315)
T 1ixk_A 163 LSRLGVLN-VILFHSSSLHIGEL-NVEFDKILLDAPCTGSGTIHKNPERKWNRTM---DDIKFCQGLQMRLLEKGLEVL 236 (315)
T ss_dssp HHHHTCCS-EEEESSCGGGGGGG-CCCEEEEEEECCTTSTTTCC--------CCH---HHHHHHHHHHHHHHHHHHHHE
T ss_pred HHHhCCCe-EEEEECChhhcccc-cccCCEEEEeCCCCCcccccCChhHhhcCCH---HHHHHHHHHHHHHHHHHHHhC
Confidence 99999987 89999999887643 3689999999999999999999998444443 334444556666666666543
No 4
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=1.7e-39 Score=342.11 Aligned_cols=226 Identities=20% Similarity=0.253 Sum_probs=191.5
Q ss_pred HhCChHHHHHHHHHhcCHH-HHHHHHHhcCCCCCeEEEEcCCCCCCHHHHHHHHhcCCCCceeccCCCceEEEeCCC---
Q 012783 226 IYSHPVWMVRRWTKYLGQE-EAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRVKTGL--- 301 (456)
Q Consensus 226 ~~s~P~wlv~~~~~~~g~~-~~~~~l~~~~~~~p~~lRvN~~k~~s~~~~~~~L~~~gi~~~~~~~~~~~~~i~~~~--- 301 (456)
.|++|.||+++|.+.||.+ +++++++++++++|+++|||++| ++++++.+.|++.|+.+++.+|+++.+.+....
T Consensus 5 ~~~~P~~~~~~~~~~~g~~~~~~~~~~a~~~~~p~~lRvN~lk-~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (479)
T 2frx_A 5 TVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLK-ISVADFLQLTAPYGWTLTPIPWCEEGFWIERDNEDA 83 (479)
T ss_dssp --CCCHHHHHHHGGGCC----CHHHHHHHTSCCCCCEEECTTT-CCHHHHHHHHGGGCCCCCEETTEEEEEC--------
T ss_pred cccCcHHHHHHHHHHcCccHHHHHHHHhcCCCCCEEEEEeCCC-CCHHHHHHHHHHcCCceeecCCCCceEEEecCcccc
Confidence 4689999999999999976 68999999999999999999999 799999999999999999999998887775321
Q ss_pred cchhcccccccccccccchHHHHHHHhcCCC--CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHH
Q 012783 302 QNVIQAGLLKEGLCAVQDESAGLVVAVVDPQ--PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAK 379 (456)
Q Consensus 302 ~~~~~~~~~~~G~~~vQd~ss~lv~~~l~~~--~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~ 379 (456)
..+...+.|.+|.+++||++|++++.+++++ +|++|||+|||||+||+++|+.+++.+.|+|+|+++.|++.+++|++
T Consensus 84 ~~~~~~~~~~~G~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~ 163 (479)
T 2frx_A 84 LPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANIS 163 (479)
T ss_dssp -CGGGSHHHHTTSEEECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHH
T ss_pred cCcccChHHhCcEEEEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 1466789999999999999999999999998 99999999999999999999999888999999999999999999999
Q ss_pred HcCCCceEEEEecccccccccCCCCccEEEEcCCCCCCcccccCCCccccccccchhhhhhchHhHHHHHHHhhhcC
Q 012783 380 LHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKTCVGIGDWRIWKSLRYCKTSFLMQHLCETKYLLL 456 (456)
Q Consensus 380 r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllDaPCSg~G~irr~p~~~~~wr~~~~~~~~~~~~~~~~l~~~~~~ll 456 (456)
++|+.+ |.++++|+..+.....+.||+|++||||||+|+++++||+...|+.. ........|..+...++++|
T Consensus 164 r~g~~n-v~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~---~~~~l~~~q~~iL~~a~~~L 236 (479)
T 2frx_A 164 RCGISN-VALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPE---SNQEIAATQRELIDSAFHAL 236 (479)
T ss_dssp HHTCCS-EEEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHH---HHHHHHHHHHHHHHHHHHHE
T ss_pred HcCCCc-EEEEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHh---HHHHHHHHHHHHHHHHHHhc
Confidence 999987 89999999887643346899999999999999999999985555544 33444456667777666553
No 5
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=1.9e-38 Score=331.86 Aligned_cols=218 Identities=26% Similarity=0.332 Sum_probs=190.8
Q ss_pred CChHHHHHHHHHhcCHHHHHHHHHhcCCC-CCeEEEEcCCCCCCHHHHHHHHhcCCCCceeccCCCceEEEeCCCcchhc
Q 012783 228 SHPVWMVRRWTKYLGQEEAIKLMVWNNSD-PSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRVKTGLQNVIQ 306 (456)
Q Consensus 228 s~P~wlv~~~~~~~g~~~~~~~l~~~~~~-~p~~lRvN~~k~~s~~~~~~~L~~~gi~~~~~~~~~~~~~i~~~~~~~~~ 306 (456)
.+|.||+++|.+.|| +++++++++++++ +|++||||++| ++++++.+.| |+..++.+|+++.+++..+. .+..
T Consensus 1 ~lP~w~~~~~~~~~g-~e~~~~l~a~~~~~~~~~lRvN~lk-~~~~~~~~~l---~~~~~~~~~~~~g~~l~~~~-~~~~ 74 (464)
T 3m6w_A 1 MLPKAFLSRMAELLG-EEFPAFLKALTEGKRTYGLRVNTLK-LPPEAFQRIS---PWPLRPIPWCQEGFYYPEEA-RPGP 74 (464)
T ss_dssp CCCHHHHHHHHHHHG-GGHHHHHHHHHTSCCCCEEEECTTT-CCHHHHHHHC---SSCCEEETTEEEEEECCTTC-CCSS
T ss_pred CCcHHHHHHHHHHHH-HHHHHHHHHcCCCCCCeEEEEcCCC-CCHHHHHHHc---CCCceecCCCCceEEECCCC-Cccc
Confidence 389999999999999 5699999999999 99999999999 7999998776 77788999999988887543 3567
Q ss_pred ccccccccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCce
Q 012783 307 AGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSV 386 (456)
Q Consensus 307 ~~~~~~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~ 386 (456)
.+.|.+|.+++||++|++++.++++++|++|||+|||||+||+++|+++++.|.|+|+|+++.+++.+++|++++|+.
T Consensus 75 ~~~~~~G~~~vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-- 152 (464)
T 3m6w_A 75 HPFFYAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-- 152 (464)
T ss_dssp SHHHHTTSEEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--
T ss_pred ChHHhCCeEEEECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--
Confidence 789999999999999999999999999999999999999999999999988899999999999999999999999997
Q ss_pred EEEEecccccccccCCCCccEEEEcCCCCCCcccccCCCccccccccchhhhhhchHhHHHHHHHhhhcC
Q 012783 387 IRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKTCVGIGDWRIWKSLRYCKTSFLMQHLCETKYLLL 456 (456)
Q Consensus 387 V~~~~~Da~~~~~~~~~~fD~VllDaPCSg~G~irr~p~~~~~wr~~~~~~~~~~~~~~~~l~~~~~~ll 456 (456)
|.++++|+..+.....+.||+|++||||||+|+++++|++...|+... .......|..+.+.+..+|
T Consensus 153 v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~---~~~l~~~Q~~iL~~a~~~L 219 (464)
T 3m6w_A 153 LAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSA---PKRMAEVQKALLAQASRLL 219 (464)
T ss_dssp CEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTH---HHHHHHHHHHHHHHHHTTE
T ss_pred EEEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHH---HHHHHHHHHHHHHHHHHhc
Confidence 789999998876433478999999999999999999999855554433 3444566777777777654
No 6
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=1.5e-38 Score=332.31 Aligned_cols=215 Identities=24% Similarity=0.295 Sum_probs=183.9
Q ss_pred hCChHHHHHHHHHhcCHHHHHHHHHhcCCCCC-eEEEEcCCCCCCHHHHHHHHhcCCCCce---eccCCCceEEEeCCCc
Q 012783 227 YSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPS-FSLRANSRKGVTRADLVMQLNLLKVPHE---LSLHLDEFIRVKTGLQ 302 (456)
Q Consensus 227 ~s~P~wlv~~~~~~~g~~~~~~~l~~~~~~~p-~~lRvN~~k~~s~~~~~~~L~~~gi~~~---~~~~~~~~~~i~~~~~ 302 (456)
.++|.||+++|.+.||. +++++++++++++| ++||||++| + +++.+.+ |+..+ +.+|++..++ .+
T Consensus 6 ~~~P~w~~~~~~~~~g~-e~~~~~~a~~~~~~~~~lRvN~lk-~--~~~~~~~---~~~~~~~~~~~~~~~~~~--~~-- 74 (456)
T 3m4x_A 6 TTLPQQFIKKYRLLLGE-EASDFFSALEQGSVKKGFRWNPLK-P--AGLDMVQ---TYHSEELQPAPYSNEGFL--GT-- 74 (456)
T ss_dssp -CCCHHHHHHHHHHHGG-GHHHHHHHHHHCCCCCEEECCTTS-T--THHHHHH---HHTCSSCCBCTTCTTEEE--SC--
T ss_pred hhChHHHHHHHHHHhCH-HHHHHHHHcCCCCCCcEEEEcCcc-H--HHHHHhc---CCcccccCCCCCCcceEE--cC--
Confidence 58999999999999994 69999999999999 999999999 4 6666654 45555 7889988887 22
Q ss_pred chhcccccccccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcC
Q 012783 303 NVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ 382 (456)
Q Consensus 303 ~~~~~~~~~~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g 382 (456)
.+...+.|.+|.+++||++|++++.++++++|++|||+|||||+||+++|+++++.++|+|+|+++.+++.+++|++++|
T Consensus 75 ~~~~~~~~~~G~~~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g 154 (456)
T 3m4x_A 75 VNGKSFLHQAGYEYSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG 154 (456)
T ss_dssp CCTTSHHHHTTSCEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT
T ss_pred CCCCChHHhCCcEEEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC
Confidence 24667899999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred CCceEEEEecccccccccCCCCccEEEEcCCCCCCcccccCCCccccccccchhhhhhchHhHHHHHHHhhhcC
Q 012783 383 VNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKTCVGIGDWRIWKSLRYCKTSFLMQHLCETKYLLL 456 (456)
Q Consensus 383 ~~~~V~~~~~Da~~~~~~~~~~fD~VllDaPCSg~G~irr~p~~~~~wr~~~~~~~~~~~~~~~~l~~~~~~ll 456 (456)
+.| |.++++|+..+.....+.||+||+||||||+|+++|+|++...|+.. ........|..|...+..+|
T Consensus 155 ~~n-v~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~---~~~~l~~~Q~~iL~~a~~~L 224 (456)
T 3m4x_A 155 VSN-AIVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEE---SPLYCQKRQQEILSSAIKML 224 (456)
T ss_dssp CSS-EEEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTT---HHHHHHHHHHHHHHHHHHTE
T ss_pred CCc-eEEEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHH---HHHHHHHHHHHHHHHHHHhc
Confidence 987 88999999887643347899999999999999999999985555443 33444566777777776654
No 7
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=2.9e-35 Score=293.76 Aligned_cols=199 Identities=22% Similarity=0.283 Sum_probs=155.1
Q ss_pred cCCCCCeEEEEcCCCCCCHHHHHHHHhcCCCCceecc------------------CCCceEEEeCCCcchhccccccccc
Q 012783 253 NNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSL------------------HLDEFIRVKTGLQNVIQAGLLKEGL 314 (456)
Q Consensus 253 ~~~~~p~~lRvN~~k~~s~~~~~~~L~~~gi~~~~~~------------------~~~~~~~i~~~~~~~~~~~~~~~G~ 314 (456)
.+.++|+++|||++| ++++++.+.|++.|+..+..+ ++++.+.+..+. .+...+.|++|.
T Consensus 6 ~~~~~p~~lRvN~lk-~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~-~~~~~~~~~~G~ 83 (309)
T 2b9e_A 6 PASQLPRFVRVNTLK-TCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQT-DLHEHPLYRAGH 83 (309)
T ss_dssp ---CCCEEEEECTTT-CCHHHHHHHHHHTTCEEEEECSSHHHHHTCCTTEEEECSSSTTEEEECTTC-CCTTSHHHHTTS
T ss_pred CCCCCCeEEEEeCCC-CCHHHHHHHHHhCCCeeeeccccccccccccccccccccCCCceEEeCCCC-CcccChHHHCCe
Confidence 346789999999999 799999999999999877653 345666665442 467789999999
Q ss_pred ccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccc
Q 012783 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (456)
Q Consensus 315 ~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da 394 (456)
+++||++|++++.++++++|++|||+|||||+||+++|+.+++.++|+|+|+++.+++.+++|++++|+.+ |+++++|+
T Consensus 84 ~~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~-v~~~~~D~ 162 (309)
T 2b9e_A 84 LILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSC-CELAEEDF 162 (309)
T ss_dssp EEECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEECCG
T ss_pred EEEECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEeCCh
Confidence 99999999999999999999999999999999999999999888999999999999999999999999987 89999999
Q ss_pred ccccccC--CCCccEEEEcCCCCCCcccccCCCccccccc-cchhhhhhchHhHHHHHHHhhhcC
Q 012783 395 RTFADNS--TVKCDKVLLDAPCSGLGVLSKTCVGIGDWRI-WKSLRYCKTSFLMQHLCETKYLLL 456 (456)
Q Consensus 395 ~~~~~~~--~~~fD~VllDaPCSg~G~irr~p~~~~~wr~-~~~~~~~~~~~~~~~l~~~~~~ll 456 (456)
..+.... ..+||+||+||||||+|+++|+||. +|+. +...+.+.....|..|.+.+.++|
T Consensus 163 ~~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~--~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l 225 (309)
T 2b9e_A 163 LAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEE--PGAGTPSPVRLHALAGFQQRALCHALTFP 225 (309)
T ss_dssp GGSCTTCGGGTTEEEEEECCCCCC--------------------CCHHHHHHHHHHHHHHHTTCT
T ss_pred HhcCccccccCCCCEEEEcCCcCCCCCCccCCCh--hhhccCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 8765322 1479999999999999999999998 5653 344555666777888888887654
No 8
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.97 E-value=1.6e-31 Score=262.04 Aligned_cols=196 Identities=28% Similarity=0.312 Sum_probs=151.1
Q ss_pred HHhcCCCCCeEEEEcCCCCCCHHHHHHHHhcCCCCceeccCCCceEEEeCCCcchhcccccccccccccchHHHHHHHhc
Q 012783 250 MVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVV 329 (456)
Q Consensus 250 l~~~~~~~p~~lRvN~~k~~s~~~~~~~L~~~gi~~~~~~~~~~~~~i~~~~~~~~~~~~~~~G~~~vQd~ss~lv~~~l 329 (456)
|..++.++|+++|||+++ .+++++.+.|++.|+.++. ++.++.+.+......+...+.|.+|.+++||.++++++.++
T Consensus 2 m~~~~~~~~~~~rvn~~~-~~~~~~~~~l~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~qd~~s~l~~~~l 79 (274)
T 3ajd_A 2 MIVYKGEKMQFIRVNTLK-INPEVLKKRLENKGVVLEK-TFLDYAFEVKKSPFSIGSTPEYLFGYYMPQSISSMIPPIVL 79 (274)
T ss_dssp -------CCEEEEECTTT-CCHHHHHHHHHTTTCEEEE-CSSTTEEEEEECSSCTTSSHHHHTTSEEECCSGGGHHHHHH
T ss_pred hhhhCCCCCeEEEEeCCC-CCHHHHHHHHHHCCCeecC-CCCCceEEEecCCCCcccChhhhCCeEEEeCHHHHHHHHHh
Confidence 455678899999999999 7999999999999999888 88898888832222466778999999999999999999999
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---CCCCcc
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---STVKCD 406 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---~~~~fD 406 (456)
++++|++|||+|||||++|+++++.+++.++|+|+|+++.+++.+++|++++|+.+ +.++++|+..+... ..+.||
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~~fD 158 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLN-TIIINADMRKYKDYLLKNEIFFD 158 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCc-EEEEeCChHhcchhhhhccccCC
Confidence 99999999999999999999999998777999999999999999999999999985 89999999876542 136899
Q ss_pred EEEEcCCCCCCcccccCCCccccccccchhhhhhchHhHHHHHHHhhhc
Q 012783 407 KVLLDAPCSGLGVLSKTCVGIGDWRIWKSLRYCKTSFLMQHLCETKYLL 455 (456)
Q Consensus 407 ~VllDaPCSg~G~irr~p~~~~~wr~~~~~~~~~~~~~~~~l~~~~~~l 455 (456)
+|++||||||+|+++|+| +|.... .......+..+.+.++++
T Consensus 159 ~Vl~d~Pcs~~g~~~~~p----~~~~~~---~~~~~~~~~~~l~~~~~~ 200 (274)
T 3ajd_A 159 KILLDAPCSGNIIKDKNR----NVSEED---IKYCSLRQKELIDIGIDL 200 (274)
T ss_dssp EEEEEECCC----------------HHH---HTGGGTCHHHHHHHHHHH
T ss_pred EEEEcCCCCCCcccccCC----CCCHHH---HHHHHHHHHHHHHHHHHh
Confidence 999999999999999998 454433 333444556666665554
No 9
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.97 E-value=4.6e-31 Score=267.74 Aligned_cols=215 Identities=20% Similarity=0.190 Sum_probs=166.7
Q ss_pred HHHHHHHhcCHHHHHHHHHhcCCCCCeEEEEcCCCCCCHHHHHHHHhcCCCCce-------------------e---ccC
Q 012783 233 MVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHE-------------------L---SLH 290 (456)
Q Consensus 233 lv~~~~~~~g~~~~~~~l~~~~~~~p~~lRvN~~k~~s~~~~~~~L~~~gi~~~-------------------~---~~~ 290 (456)
|-+.+.++|| ++|..+..++.++++..+|+|+.. +.+++.+.|+..|..-. + ..+
T Consensus 23 Fd~~Y~~~~G-~~W~~~r~aL~~~~~~~a~vN~f~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 99 (359)
T 4fzv_A 23 FDMTYSVQFG-DLWPSIRVSLLSEQKYGALVNNFA--AWDHVSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWA 99 (359)
T ss_dssp HHHHHHHHHG-GGHHHHHHHHTSCCCCEEEECTTS--CHHHHHHHHHHTTCEEHHHHHHHTTTCCC-----CCSSCHHHH
T ss_pred HHHHHHHHhh-hhhHHHHHHHcCcchhEEEeccCC--ChHHHHHHHHhccCccchhhhhcccccccccccccCCCccccc
Confidence 5677788888 579999999999999999999986 67889999988765210 0 001
Q ss_pred CCc---eEEEeCCCcchhccccccccc-----ccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEE
Q 012783 291 LDE---FIRVKTGLQNVIQAGLLKEGL-----CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVY 362 (456)
Q Consensus 291 ~~~---~~~i~~~~~~~~~~~~~~~G~-----~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~ 362 (456)
++. .+..+.+ .+...+.|++|. |++||.+||+++.+|+++||++|||+||||||||++|++.+ +.+.|+
T Consensus 100 ~~~~l~~~~~~~g--~~~~~p~~~~g~~~vqd~~iQd~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~-~~~~l~ 176 (359)
T 4fzv_A 100 CSPNLRCFTFDRG--DISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTG-CCRNLA 176 (359)
T ss_dssp SCSSCCEEECCTT--CCCCCCCCCBCTTSSBSEEEECGGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTT-CEEEEE
T ss_pred CCccceEEecCCC--ChhcCCCcccCceeccchhhhCHHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhc-CCCcEE
Confidence 111 1122222 234455666665 55566999999999999999999999999999999999976 458999
Q ss_pred EEeCCHHHHHHHHHHHHHcCCC-----ceEEEEecccccccccCCCCccEEEEcCCCCCC--cccccCCCccccccccch
Q 012783 363 AIDINKGRLRILNETAKLHQVN-----SVIRTIHADLRTFADNSTVKCDKVLLDAPCSGL--GVLSKTCVGIGDWRIWKS 435 (456)
Q Consensus 363 AvDis~~rl~~l~~n~~r~g~~-----~~V~~~~~Da~~~~~~~~~~fD~VllDaPCSg~--G~irr~p~~~~~wr~~~~ 435 (456)
|+|+++.|++.+++|++++|.. +.|.+.+.|+..+.....+.||+||+||||||+ |+++++|+++.+|+..
T Consensus 177 A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~-- 254 (359)
T 4fzv_A 177 ANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKK-- 254 (359)
T ss_dssp EECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHH--
T ss_pred EEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHH--
Confidence 9999999999999999999864 348899999998876556789999999999997 8899999985555443
Q ss_pred hhhhhchHhHHHHHHHhhhcC
Q 012783 436 LRYCKTSFLMQHLCETKYLLL 456 (456)
Q Consensus 436 ~~~~~~~~~~~~l~~~~~~ll 456 (456)
.....+.+|..|...|..+|
T Consensus 255 -~~~~l~~lQ~~iL~~a~~~l 274 (359)
T 4fzv_A 255 -ERQILPVLQVQLLAAGLLAT 274 (359)
T ss_dssp -HHHTHHHHHHHHHHHHHHTE
T ss_pred -HHHHHHHHHHHHHHHHHhcC
Confidence 44445567888888887664
No 10
>1tzv_A NUSB protein, N utilization substance protein B homolog; RNA-protein interaction, transcriptional antitermination, transcription regulation; 1.35A {Thermotoga maritima} SCOP: a.79.1.1 PDB: 1tzu_A 1tzt_A 1tzw_A 1tzx_A*
Probab=99.96 E-value=1.7e-29 Score=224.31 Aligned_cols=128 Identities=18% Similarity=0.238 Sum_probs=116.4
Q ss_pred cHHHHHHHHHHHHHHcCCC-chHHHhhcCCCCCCCcchhhhhhhccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHh
Q 012783 58 SPHRAVSAVRLMRIQFGGA-FADLLNKKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVGGTIRWRRYLDHLICLL 136 (456)
Q Consensus 58 ~~aR~~A~~~L~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~lv~gv~r~~~~lD~~i~~~ 136 (456)
+++|+.|+++||+++.++. +++.++..+ +. ..++++|++|+++||+||++|+..||++|+++
T Consensus 6 ~~aR~~A~~~L~~~~~~~~~~~~~~l~~~----------------~~-~~l~~~d~~~~~~Lv~gvl~~~~~lD~~I~~~ 68 (142)
T 1tzv_A 6 RRMRLAVFKALFQHEFRRDEDLEQILEEI----------------LD-ETYDKKAKEDARRYIRGIKENLSMIDDLISRY 68 (142)
T ss_dssp HHHHHHHHHHHHHHTTCTTSCHHHHHHHH----------------CC-TTSCHHHHHHHHHHHHHHHHTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCCCHHHHHHHH----------------HH-hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999999998888 887765542 12 45789999999999999999999999999999
Q ss_pred ccCCCCCCcccHHHHHHHHHHHHHHHhcC-CCChhHHHHHHHHHHhhcCCCchhhHHHHHHHHHhhhc
Q 012783 137 CHDEKTFSSMEPLLLQILRIGFYEIVKLD-MPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLKD 203 (456)
Q Consensus 137 ~~~~~~~~~l~~~~~~iLrlg~yell~~~-~p~~a~inE~V~lak~~~~~~~~~fVNaVLr~i~r~~~ 203 (456)
+++ |+++++++++++|||+|+|||+|++ +|++++|||+|++||.|+++++++|||||||++++...
T Consensus 69 l~~-w~l~rl~~~~r~iLrla~yEl~~~~~iP~~vaInEaVelaK~~~~~~~~~fVNgVL~~i~r~~~ 135 (142)
T 1tzv_A 69 LEK-WSLNRLSVVDRNVLRLATYELLFEKDIPIEVTIDEAIEIAKRYGTENSGKFVNGILDRIAKEHA 135 (142)
T ss_dssp CSS-SCGGGSCHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHC
T ss_pred cCC-CChHHCCHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHhc
Confidence 997 9999999999999999999999985 99999999999999999988999999999999998653
No 11
>3r2d_A Protein NUSB, N utilization substance protein B; cross species NUSB-NUSE-RNA interaction; 2.20A {Aquifex aeolicus} PDB: 2jr0_A 3r2c_A* 4eya_A
Probab=99.96 E-value=1.6e-29 Score=226.05 Aligned_cols=130 Identities=22% Similarity=0.229 Sum_probs=113.9
Q ss_pred CcHHHHHHHHHHHHHHcCCCchHHHhhcCCCCCCCcchhhhhhhccCCCC-CCHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 012783 57 VSPHRAVSAVRLMRIQFGGAFADLLNKKGKGSGDNEMGYVERTLGFRTKD-LDDRDLRLVTDIVGGTIRWRRYLDHLICL 135 (456)
Q Consensus 57 ~~~aR~~A~~~L~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~d~~~~~~lv~gv~r~~~~lD~~i~~ 135 (456)
++++|+.|+++||+++.++.+.+.++..+ .+ ... ++++|+.|+++||+||++|+..||++|++
T Consensus 5 R~~aR~~A~q~L~~~~~~~~~~~~~l~~~----------~~------~~~~~~~~dr~~~~~lv~gvl~~~~~lD~~i~~ 68 (149)
T 3r2d_A 5 RKGARDTAFLVLYRWDLRGENPGELFKEV----------VE------EKNIKNKDAYEYAKKLVDTAVRHIEEIDSIIEK 68 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCHHHHHHHH----------HH------HHTCCCHHHHHHHHHHHHHHHHTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHH----------HH------hcccCCHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 35899999999999998888888766542 11 123 88999999999999999999999999999
Q ss_pred hccCCCCCCcccHHHHHHHHHHHHHHHhc-CCCChhHHHHHHHHHHhhcCCCchhhHHHHHHHHHhhhc
Q 012783 136 LCHDEKTFSSMEPLLLQILRIGFYEIVKL-DMPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLKD 203 (456)
Q Consensus 136 ~~~~~~~~~~l~~~~~~iLrlg~yell~~-~~p~~a~inE~V~lak~~~~~~~~~fVNaVLr~i~r~~~ 203 (456)
++++ |+++++++++++|||+|+|||+|+ ++|++++|||+|++||.|+++++++|||||||++.+...
T Consensus 69 ~l~~-w~~~rl~~~~r~iLrla~yEl~~~~~iP~~vaInEaVelaK~~~~~~~~~fVNgVLr~i~r~~~ 136 (149)
T 3r2d_A 69 HLKG-WSIDRLGYVERNALRLGVAELIFLKSKEPGRVFIDIVDLVKKYADEKAGKFVNGVLSAIYKAYI 136 (149)
T ss_dssp TC----CGGGSCHHHHHHHHHHHHHHTTSCCSCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHC-
T ss_pred HhcC-CCccccCHHHHHHHHHHHHHHHHcCCCCCeehHHHHHHHHHHhCCCCccccchHHhhHHHHhhc
Confidence 9987 999999999999999999999999 599999999999999999998899999999999998654
No 12
>3d3b_A Protein NUSB, N utilization substance protein B; NUSB, NUSE, NUT site, phage lambda, lambdan antitermina antitermination; HET: NHE; 1.30A {Escherichia coli} PDB: 3d3c_A 3imq_A 1ey1_A
Probab=99.96 E-value=4.7e-29 Score=221.21 Aligned_cols=127 Identities=22% Similarity=0.302 Sum_probs=111.9
Q ss_pred cHHHHHHHHHHHHHHcCCCchHHHhhcCCCCCCCcchhhhhhhccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhc
Q 012783 58 SPHRAVSAVRLMRIQFGGAFADLLNKKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVGGTIRWRRYLDHLICLLC 137 (456)
Q Consensus 58 ~~aR~~A~~~L~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~lv~gv~r~~~~lD~~i~~~~ 137 (456)
+++|+.|+++||+++.++...+.+...+ + ....++++|++|+++|||||++|+..||++|++++
T Consensus 9 ~~aR~~A~~~L~~~~~~~~~~~~~~~~~----------~------~~~~l~~~d~~~~~~Lv~gvl~~~~~lD~~I~~~l 72 (141)
T 3d3b_A 9 RRARECAVQALYSWQLSQNDIADVEYQF----------L------AEQDVKDVDVLYFRELLAGVATNTAYLDGLMKPYL 72 (141)
T ss_dssp HHHHHHHHHHHHHHHHHCCCHHHHHHHH----------H------HHSCCTTSCHHHHHHHHHHHHHTHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHH----------H------HhccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Confidence 4799999999999987765555443321 1 12357789999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHHHHHHHhc-CCCChhHHHHHHHHHHhhcCCCchhhHHHHHHHHHhhh
Q 012783 138 HDEKTFSSMEPLLLQILRIGFYEIVKL-DMPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLK 202 (456)
Q Consensus 138 ~~~~~~~~l~~~~~~iLrlg~yell~~-~~p~~a~inE~V~lak~~~~~~~~~fVNaVLr~i~r~~ 202 (456)
+ |+++++++++++|||+|+|||+|+ ++|++++|||+|+|||.|+++++++|||||||++++..
T Consensus 73 ~--~~l~rl~~~~r~iLrla~yEll~~~~iP~~vaInEaVelaK~~~~~~~~~fVNgVLr~i~r~~ 136 (141)
T 3d3b_A 73 S--RLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVLDKAAPVI 136 (141)
T ss_dssp T--TCSSCCCHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH
T ss_pred C--CCHHHcCHHHHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHHHCCCCchHHHHHHHHHHHHHH
Confidence 8 999999999999999999999998 59999999999999999999999999999999999864
No 13
>1eyv_A NUSB protein, N-utilizing substance protein B homolog; helical bundle, structural genomics, PSI, protein structure initiative; 1.60A {Mycobacterium tuberculosis} SCOP: a.79.1.1
Probab=99.95 E-value=3.3e-28 Score=219.21 Aligned_cols=133 Identities=23% Similarity=0.269 Sum_probs=109.0
Q ss_pred CcHHHHHHHHHHHHHHcCCCchHHHhhcCCCCCCCcchhhhhhhccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHh
Q 012783 57 VSPHRAVSAVRLMRIQFGGAFADLLNKKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVGGTIRWRRYLDHLICLL 136 (456)
Q Consensus 57 ~~~aR~~A~~~L~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~lv~gv~r~~~~lD~~i~~~ 136 (456)
++++|+.|+++||+++.++.+.+.++... .. +. ......+.|++|+++|||||++|+..||++|+++
T Consensus 10 R~~aR~~Alq~L~~~~~~~~~~~~~l~~~----------~~--l~-~~d~~~~~~~~~~~~lv~gvl~~~~~lD~~i~~~ 76 (156)
T 1eyv_A 10 RHQARKRAVALLFEAEVRGISAAEVVDTR----------AA--LA-EAKPDIARLHPYTAAVARGVSEHAAHIDDLITAH 76 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCHHHHHHHH----------HH--HH-HHCTTSCCCCHHHHHHHHHHHHTHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHhcCCCHHHHHHHH----------Hh--cc-ccccccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 45799999999999988776666544321 00 00 0011224558999999999999999999999999
Q ss_pred ccCCCCCCcccHHHHHHHHHHHHHHHhcC-CCChhHHHHHHHHHHhhcCCCchhhHHHHHHHHHhhhc
Q 012783 137 CHDEKTFSSMEPLLLQILRIGFYEIVKLD-MPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLKD 203 (456)
Q Consensus 137 ~~~~~~~~~l~~~~~~iLrlg~yell~~~-~p~~a~inE~V~lak~~~~~~~~~fVNaVLr~i~r~~~ 203 (456)
+++ |+++++++++++|||+|+|||+|++ +|++++|||+|+|||.|+++++++|||||||++.+...
T Consensus 77 l~~-w~l~rl~~~~r~iLrla~yel~~~~~iP~~v~InEaVelak~~~~~~~~~fVNgVLr~i~r~~~ 143 (156)
T 1eyv_A 77 LRG-WTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELSTDDSPGFVNGVLGQVMLVTP 143 (156)
T ss_dssp STT-CCGGGSCHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHC----
T ss_pred hcC-CChhhCCHHHHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHhCCCccccchHHHHHHHHHhHH
Confidence 987 9999999999999999999999985 99999999999999999999999999999999998643
No 14
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.53 E-value=4.6e-14 Score=136.21 Aligned_cols=127 Identities=16% Similarity=0.178 Sum_probs=90.4
Q ss_pred HHHHHHhcCCC-CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc
Q 012783 322 AGLVVAVVDPQ-PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN 400 (456)
Q Consensus 322 s~lv~~~l~~~-~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~ 400 (456)
+.+++.++.+. ++.+|||+|||+|..++.+++.. .++|+++|+++.+++.+++|++..++.++++++++|+..+...
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~--~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~ 114 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRT--KAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL 114 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTC--CCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhc--CCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh
Confidence 77888888888 89999999999999999999873 3499999999999999999999999987799999999887642
Q ss_pred C-CCCccEEEEcCCCCCC-cccccCCCccccccccchhhhhhchHhHHHHHHHhhhcC
Q 012783 401 S-TVKCDKVLLDAPCSGL-GVLSKTCVGIGDWRIWKSLRYCKTSFLMQHLCETKYLLL 456 (456)
Q Consensus 401 ~-~~~fD~VllDaPCSg~-G~irr~p~~~~~wr~~~~~~~~~~~~~~~~l~~~~~~ll 456 (456)
. .++||.|++||||... +.-.++|+. ...+.+|......+.+.+.+.++|
T Consensus 115 ~~~~~fD~Ii~npPy~~~~~~~~~~~~~------~~~~a~~~~~~~~~~~l~~~~~~L 166 (259)
T 3lpm_A 115 IPKERADIVTCNPPYFATPDTSLKNTNE------HFRIARHEVMCTLEDTIRVAASLL 166 (259)
T ss_dssp SCTTCEEEEEECCCC-----------------------------HHHHHHHHHHHHHE
T ss_pred hccCCccEEEECCCCCCCccccCCCCch------HHHhhhccccCCHHHHHHHHHHHc
Confidence 2 4789999999999866 333345542 223445555556666666666554
No 15
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.45 E-value=1.4e-13 Score=135.29 Aligned_cols=180 Identities=12% Similarity=0.079 Sum_probs=121.5
Q ss_pred HHHHHHHHHhc--CHHHHHHHHHhcCCCCCeEEEEcC--CCCCCHHHHHHHHhc--CCCCceeccCCCceEEEeCCCcch
Q 012783 231 VWMVRRWTKYL--GQEEAIKLMVWNNSDPSFSLRANS--RKGVTRADLVMQLNL--LKVPHELSLHLDEFIRVKTGLQNV 304 (456)
Q Consensus 231 ~wlv~~~~~~~--g~~~~~~~l~~~~~~~p~~lRvN~--~k~~s~~~~~~~L~~--~gi~~~~~~~~~~~~~i~~~~~~~ 304 (456)
.|..++|.+.+ +..+++.++......++.+++.|. ....+.+.+.+.+++ .+.+.. +.-+.- .+
T Consensus 21 ~~~~~~l~~~~~~~~~~a~~ll~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~p~~---yi~g~~-------~f 90 (284)
T 1nv8_A 21 RDCSGKLEGVTETSVLEVLLIVSRVLGIRKEDLFLKDLGVSPTEEKRILELVEKRASGYPLH---YILGEK-------EF 90 (284)
T ss_dssp HHHHHHTTTTCSCHHHHHHHHHHHHHTCCGGGGCCSSCCCCHHHHHHHHHHHHHHHTTCCHH---HHHTEE-------EE
T ss_pred HHHHHHHHhccCChHHHHHHHHHHHcCCCHHHHHhccccccccCHHHHHHHHHHHHCCCCCe---EEeeee-------EE
Confidence 46666666554 445677788777666777777776 332233444444433 233332 111100 01
Q ss_pred hccc-ccccccccccchHHHHHHHhcC---CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHH
Q 012783 305 IQAG-LLKEGLCAVQDESAGLVVAVVD---PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL 380 (456)
Q Consensus 305 ~~~~-~~~~G~~~vQd~ss~lv~~~l~---~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r 380 (456)
.... ....|.+..+.....++..++. ..++.+|||+|||+|..++.++.. +..+|+|+|+|+.+++.+++|+++
T Consensus 91 ~~~~~~v~~~~lipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~ 168 (284)
T 1nv8_A 91 MGLSFLVEEGVFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAER 168 (284)
T ss_dssp TTEEEECCTTSCCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCeEEEeCCCceecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHH
Confidence 1111 1123455555555555444432 346789999999999999999988 568999999999999999999999
Q ss_pred cCCCceEEEEecccccccccCCCCc---cEEEEcCCCCCCcccccCCCc
Q 012783 381 HQVNSVIRTIHADLRTFADNSTVKC---DKVLLDAPCSGLGVLSKTCVG 426 (456)
Q Consensus 381 ~g~~~~V~~~~~Da~~~~~~~~~~f---D~VllDaPCSg~G~irr~p~~ 426 (456)
+|+.++++++++|+..... ++| |+|++||||.+.+. ...|++
T Consensus 169 ~~l~~~v~~~~~D~~~~~~---~~f~~~D~IvsnPPyi~~~~-~l~~~v 213 (284)
T 1nv8_A 169 HGVSDRFFVRKGEFLEPFK---EKFASIEMILSNPPYVKSSA-HLPKDV 213 (284)
T ss_dssp TTCTTSEEEEESSTTGGGG---GGTTTCCEEEECCCCBCGGG-SCTTSC
T ss_pred cCCCCceEEEECcchhhcc---cccCCCCEEEEcCCCCCccc-ccChhh
Confidence 9998879999999976432 368 99999999999887 566665
No 16
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.42 E-value=8.2e-13 Score=135.60 Aligned_cols=103 Identities=26% Similarity=0.281 Sum_probs=87.0
Q ss_pred ccccccccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCce
Q 012783 307 AGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSV 386 (456)
Q Consensus 307 ~~~~~~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~ 386 (456)
...+++|.|..|..+..++...+ ++|++|||+|||+|++|+++|.. + ..|+++|+|+.+++.+++|++.+|+.+
T Consensus 190 ~~~~~tG~f~dqr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~--g-a~V~avDis~~al~~a~~n~~~ng~~~- 263 (393)
T 4dmg_A 190 ALAQKTGYYLDQRENRRLFEAMV--RPGERVLDVYSYVGGFALRAARK--G-AYALAVDKDLEALGVLDQAALRLGLRV- 263 (393)
T ss_dssp TTCCTTSSCGGGHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHT--T-CEEEEEESCHHHHHHHHHHHHHHTCCC-
T ss_pred hhccccCcCCCHHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHHHc--C-CeEEEEECCHHHHHHHHHHHHHhCCCC-
Confidence 46788999999999988887664 36999999999999999999985 3 449999999999999999999999985
Q ss_pred EEEEecccccccccCCCCccEEEEcCCCCC
Q 012783 387 IRTIHADLRTFADNSTVKCDKVLLDAPCSG 416 (456)
Q Consensus 387 V~~~~~Da~~~~~~~~~~fD~VllDaPCSg 416 (456)
.+.++|+..+.....+.||+|++||||..
T Consensus 264 -~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~ 292 (393)
T 4dmg_A 264 -DIRHGEALPTLRGLEGPFHHVLLDPPTLV 292 (393)
T ss_dssp -EEEESCHHHHHHTCCCCEEEEEECCCCCC
T ss_pred -cEEEccHHHHHHHhcCCCCEEEECCCcCC
Confidence 35699998765433345999999999943
No 17
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.41 E-value=3.8e-12 Score=129.62 Aligned_cols=210 Identities=12% Similarity=0.147 Sum_probs=132.5
Q ss_pred HHHHHHHHHhhcC-CCchhhHHHHHHHHHhhhcCCCCCCCcccCCchHHHHHHHHHhCChHHHHHHHHHhcCHHHHHHHH
Q 012783 172 VDENVRLAKVALR-PGAGNLVNGILRKLVLLKDNNSLPLPKLEGNDRAQARALATIYSHPVWMVRRWTKYLGQEEAIKLM 250 (456)
Q Consensus 172 inE~V~lak~~~~-~~~~~fVNaVLr~i~r~~~~~~~~~~~~~~~~~~~~~~la~~~s~P~wlv~~~~~~~g~~~~~~~l 250 (456)
.|+.++.++.-.+ +...+++|+||+.+ +. . . ...+|+..+++|.|.+++|.+.++... ++
T Consensus 25 ~~~~~~~~~~~~~l~~~~~~~~~ll~~L-~~-~-----~---------t~~eLa~~~g~~~~~v~~~L~~l~~~g---ll 85 (373)
T 2qm3_A 25 MKEIVERVKTKTKIPVYERSVENVLSAV-LA-S-----D---------DIWRIVDLSEEPLPLVVAILESLNELG---YV 85 (373)
T ss_dssp HHHHHHHHHTTCSSCCCHHHHHHHHHHH-HH-C-----S---------CHHHHHHHHTSCHHHHHHHHHHHHHTT---SE
T ss_pred HHHHHHHHHHhcCccHhHHHHHHHHHHh-cC-C-----C---------CHHHHHHHhCCChHHHHHHHHHHhhCC---cE
Confidence 4555555553322 12378999999999 42 1 1 135688899999999999998875321 22
Q ss_pred HhcCCCCCeEEEEcCCCCCCHHHHHHHHhcCCCCceeccCCCc----eEEEe-------------CCCcchhcccccccc
Q 012783 251 VWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDE----FIRVK-------------TGLQNVIQAGLLKEG 313 (456)
Q Consensus 251 ~~~~~~~p~~lRvN~~k~~s~~~~~~~L~~~gi~~~~~~~~~~----~~~i~-------------~~~~~~~~~~~~~~G 313 (456)
+..+ . +|.++. ..++... .+........... .+.+. ... ......|.++
T Consensus 86 ~~~~---~--~~lt~~----~~~~l~~---~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~ 151 (373)
T 2qm3_A 86 TFED---G--VKLTEK----GEELVAE---YGIGKRYDFTCPHCQGKTVDLQAFADLLEQFREIVKDR--PEPLHEFDQA 151 (373)
T ss_dssp ECSS---S--SEECHH----HHHHHHH---HTCCCCCC------------CGGGHHHHHHHHHHHTTC--CCCCGGGTCC
T ss_pred EECC---C--EEECHH----HHHHHHh---cCccccccccchhhcCCCcchhhhHHHHHHHHHHHhcC--CccchhcCCe
Confidence 1111 2 444331 1233332 2221110000000 00000 000 0112346667
Q ss_pred cccccchHHHHHHHhc-CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEec
Q 012783 314 LCAVQDESAGLVVAVV-DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA 392 (456)
Q Consensus 314 ~~~vQd~ss~lv~~~l-~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~ 392 (456)
+...|+..+.++.... ...+|.+|||+| |+|..+..++.. ++.++|+++|+++.+++.+++|++++|+. +|+++++
T Consensus 152 ~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~ 228 (373)
T 2qm3_A 152 YVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTF 228 (373)
T ss_dssp CBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECC
T ss_pred ecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEC
Confidence 7777887776664432 334689999999 999999999876 44579999999999999999999999987 4999999
Q ss_pred cccc-ccccCCCCccEEEEcCCCCCC
Q 012783 393 DLRT-FADNSTVKCDKVLLDAPCSGL 417 (456)
Q Consensus 393 Da~~-~~~~~~~~fD~VllDaPCSg~ 417 (456)
|+.. ++....++||+|++|+||+..
T Consensus 229 D~~~~l~~~~~~~fD~Vi~~~p~~~~ 254 (373)
T 2qm3_A 229 DLRKPLPDYALHKFDTFITDPPETLE 254 (373)
T ss_dssp CTTSCCCTTTSSCBSEEEECCCSSHH
T ss_pred hhhhhchhhccCCccEEEECCCCchH
Confidence 9987 443223589999999999753
No 18
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.39 E-value=9.5e-14 Score=135.25 Aligned_cols=159 Identities=17% Similarity=0.251 Sum_probs=96.1
Q ss_pred HHHhcCCCCCeEEEEcCCCCCCHHHH-HHHHhcCCCCceeccCCCceEEEeCCCcchhcccccccccccccchHHHHHHH
Q 012783 249 LMVWNNSDPSFSLRANSRKGVTRADL-VMQLNLLKVPHELSLHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVA 327 (456)
Q Consensus 249 ~l~~~~~~~p~~lRvN~~k~~s~~~~-~~~L~~~gi~~~~~~~~~~~~~i~~~~~~~~~~~~~~~G~~~vQd~ss~lv~~ 327 (456)
++.++++.++++.|+|+.+ .+.+++ .+.|...++..... .....+....+. .......+..+...+++..+..++.
T Consensus 28 i~~~~~~~~~~~~r~~~~~-~~~~~~~~~~l~g~~~g~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (275)
T 1yb2_A 28 ILVSEDEYGKFDESTNSIL-VKGKMHHLGISRVIEPGDELI-VSGKSFIVSDFS-PMYFGRVIRRNTQIISEIDASYIIM 104 (275)
T ss_dssp EEECSSCCEEEETTTTEEE-C-CCEEECC-CCCCCTTCEEE-ETTEEEEEECCC-GGGHHHHC-----------------
T ss_pred EEEecCCCCceecccccee-ccCCccchhheeCCCCCcEEE-ECCeEEEEeCCC-HHHHHhhccccccccChhhHHHHHH
Confidence 4456788889999998554 222111 11222222211111 122222222211 1222244566777788888888899
Q ss_pred hcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc-CCCceEEEEecccccccccCCCCcc
Q 012783 328 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-QVNSVIRTIHADLRTFADNSTVKCD 406 (456)
Q Consensus 328 ~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~-g~~~~V~~~~~Da~~~~~~~~~~fD 406 (456)
.+++.++.+|||+|||+|..+..+++.+.+.++|+++|+++.+++.++++++.. |..+ +.++++|+.... ..++||
T Consensus 105 ~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~-v~~~~~d~~~~~--~~~~fD 181 (275)
T 1yb2_A 105 RCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGN-VRTSRSDIADFI--SDQMYD 181 (275)
T ss_dssp -CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTT-EEEECSCTTTCC--CSCCEE
T ss_pred HcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCc-EEEEECchhccC--cCCCcc
Confidence 999999999999999999999999998666789999999999999999999998 8765 899999997632 236899
Q ss_pred EEEEcCC
Q 012783 407 KVLLDAP 413 (456)
Q Consensus 407 ~VllDaP 413 (456)
+|++|+|
T Consensus 182 ~Vi~~~~ 188 (275)
T 1yb2_A 182 AVIADIP 188 (275)
T ss_dssp EEEECCS
T ss_pred EEEEcCc
Confidence 9999887
No 19
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.38 E-value=5.6e-12 Score=118.39 Aligned_cols=138 Identities=12% Similarity=0.063 Sum_probs=96.4
Q ss_pred CCHHHHHHHHhcCCCCce-----------eccCCCceEEEeCCCcchhcccccccccccccchH-HHHHHHhcC--CCCC
Q 012783 269 VTRADLVMQLNLLKVPHE-----------LSLHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDES-AGLVVAVVD--PQPG 334 (456)
Q Consensus 269 ~s~~~~~~~L~~~gi~~~-----------~~~~~~~~~~i~~~~~~~~~~~~~~~G~~~vQd~s-s~lv~~~l~--~~~g 334 (456)
.+.+++++.|++.|+... ...+.+.. .....+.+..+...+|++. ...+...+. +.++
T Consensus 7 ~~~~~l~~~l~~~g~~~~~~~~~a~~~~~r~~f~~~~--------~y~~~~~~~~~~~~~~~p~~~~~~l~~l~~~~~~~ 78 (226)
T 1i1n_A 7 ASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--------PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEG 78 (226)
T ss_dssp SSHHHHHHHHHHTTSCCSHHHHHHHHTSCGGGTCSSC--------TTSSSCEEEETTEEECCHHHHHHHHHHTTTTSCTT
T ss_pred chHHHHHHHHHHcCCcCCHHHHHHHHhCCHHHcCCCc--------cCCCCccccCCCceecCHHHHHHHHHHHHhhCCCC
Confidence 578899999999887421 11111111 1111122222233344443 223444554 7789
Q ss_pred CeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCC----CceEEEEecccccccccCCCCccEEEE
Q 012783 335 QSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV----NSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 335 ~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~----~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
.+|||+|||+|.++.++++.+++.++|+++|+++.+++.+++++++.|+ .+++.++++|+...... .++||+|++
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~i~~ 157 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE-EAPYDAIHV 157 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG-GCCEEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc-CCCcCEEEE
Confidence 9999999999999999999876668999999999999999999998764 23489999998754332 358999999
Q ss_pred cCCCC
Q 012783 411 DAPCS 415 (456)
Q Consensus 411 DaPCS 415 (456)
+.+|.
T Consensus 158 ~~~~~ 162 (226)
T 1i1n_A 158 GAAAP 162 (226)
T ss_dssp CSBBS
T ss_pred CCchH
Confidence 99984
No 20
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.36 E-value=1.2e-12 Score=123.00 Aligned_cols=103 Identities=16% Similarity=0.149 Sum_probs=88.6
Q ss_pred ccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccc
Q 012783 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (456)
Q Consensus 315 ~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da 394 (456)
+.+++..+.++..++...++.+|||+|||+|..++.+++.+++.++|+++|+++.+++.+++|+++.|+.++|+++++|+
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (221)
T 3u81_A 40 MNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGAS 119 (221)
T ss_dssp GGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCH
Confidence 46777788888888777788999999999999999999987767899999999999999999999999987899999999
Q ss_pred ccccccCC-----CCccEEEEcCCCCCC
Q 012783 395 RTFADNST-----VKCDKVLLDAPCSGL 417 (456)
Q Consensus 395 ~~~~~~~~-----~~fD~VllDaPCSg~ 417 (456)
........ ++||.|++|+++...
T Consensus 120 ~~~l~~~~~~~~~~~fD~V~~d~~~~~~ 147 (221)
T 3u81_A 120 QDLIPQLKKKYDVDTLDMVFLDHWKDRY 147 (221)
T ss_dssp HHHGGGTTTTSCCCCCSEEEECSCGGGH
T ss_pred HHHHHHHHHhcCCCceEEEEEcCCcccc
Confidence 76533322 589999999877644
No 21
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.36 E-value=1.2e-12 Score=131.41 Aligned_cols=109 Identities=21% Similarity=0.231 Sum_probs=91.1
Q ss_pred ccccccccccccchHHHHHHHhcC-CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 307 AGLLKEGLCAVQDESAGLVVAVVD-PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 307 ~~~~~~G~~~vQd~ss~lv~~~l~-~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
...++.|+|.-|......+...+. ..++.+|||+|||+|+.++.++.. + .+|+++|+|+.+++.+++|++.+|+.+
T Consensus 126 ~~~~~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~--g-a~V~~VD~s~~al~~a~~n~~~~gl~~ 202 (332)
T 2igt_A 126 TAFRHVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAA--G-AEVTHVDASKKAIGWAKENQVLAGLEQ 202 (332)
T ss_dssp CSSSCCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT--T-CEEEEECSCHHHHHHHHHHHHHHTCTT
T ss_pred CccccceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc--C-CEEEEEECCHHHHHHHHHHHHHcCCCc
Confidence 355678889889888777777664 456889999999999999999984 2 399999999999999999999999986
Q ss_pred -eEEEEecccccccccC---CCCccEEEEcCCCCCCc
Q 012783 386 -VIRTIHADLRTFADNS---TVKCDKVLLDAPCSGLG 418 (456)
Q Consensus 386 -~V~~~~~Da~~~~~~~---~~~fD~VllDaPCSg~G 418 (456)
++.++++|+..+.... .++||+|++||||.+.+
T Consensus 203 ~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~ 239 (332)
T 2igt_A 203 APIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRG 239 (332)
T ss_dssp SCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEEC
T ss_pred cceEEEECcHHHHHHHHHhcCCCceEEEECCccccCC
Confidence 4899999998764321 35899999999998765
No 22
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.36 E-value=1.8e-12 Score=125.53 Aligned_cols=129 Identities=18% Similarity=0.179 Sum_probs=89.6
Q ss_pred hHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHH---cCCCceEEEEeccccc
Q 012783 320 ESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL---HQVNSVIRTIHADLRT 396 (456)
Q Consensus 320 ~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r---~g~~~~V~~~~~Da~~ 396 (456)
..+.+++.++...++.+|||+|||+|..++.++...+ ..+|+++|+++.+++.+++|++. .++.+++.++++|+..
T Consensus 23 ~D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~ 101 (260)
T 2ozv_A 23 MDAMLLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTL 101 (260)
T ss_dssp CHHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTC
T ss_pred cHHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHH
Confidence 3567888888888899999999999999999999853 57999999999999999999998 8888779999999987
Q ss_pred ccc------cCCCCccEEEEcCCCCCCcccccCCCccccccccchhhhhhchHhHHHHHHHhhhcC
Q 012783 397 FAD------NSTVKCDKVLLDAPCSGLGVLSKTCVGIGDWRIWKSLRYCKTSFLMQHLCETKYLLL 456 (456)
Q Consensus 397 ~~~------~~~~~fD~VllDaPCSg~G~irr~p~~~~~wr~~~~~~~~~~~~~~~~l~~~~~~ll 456 (456)
+.. ...++||.|++|||+...+ -.++|+. ...+.+|......+.+.+.+..+|
T Consensus 102 ~~~~~~~~~~~~~~fD~Vv~nPPy~~~~-~~~~~~~------~~~~a~~~~~~~~~~~l~~~~~~L 160 (260)
T 2ozv_A 102 RAKARVEAGLPDEHFHHVIMNPPYNDAG-DRRTPDA------LKAEAHAMTEGLFEDWIRTASAIM 160 (260)
T ss_dssp CHHHHHHTTCCTTCEEEEEECCCC----------------------------CCHHHHHHHHHHHE
T ss_pred HhhhhhhhccCCCCcCEEEECCCCcCCC-CCCCcCH------HHHHHhhcCcCCHHHHHHHHHHHc
Confidence 632 1246899999999998775 2445553 122344444444566666555543
No 23
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.35 E-value=2e-12 Score=132.60 Aligned_cols=106 Identities=18% Similarity=0.200 Sum_probs=90.1
Q ss_pred ccccccccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCC-Cc
Q 012783 307 AGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV-NS 385 (456)
Q Consensus 307 ~~~~~~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~-~~ 385 (456)
...+++|+|..|.+...++..+ .+|.+|||+|||+|+++++++.. +.++|+++|+++.+++.+++|++.+|+ .+
T Consensus 197 ~~~~~tgff~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~ 271 (396)
T 3c0k_A 197 QHGHKTGYYLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMG--GCSQVVSVDTSQEALDIARQNVELNKLDLS 271 (396)
T ss_dssp TTSSTTSSCGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCGG
T ss_pred cccccCCcCcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCcc
Confidence 4568889999999988887766 47899999999999999999985 356999999999999999999999999 64
Q ss_pred eEEEEeccccccccc---CCCCccEEEEcCCCCCC
Q 012783 386 VIRTIHADLRTFADN---STVKCDKVLLDAPCSGL 417 (456)
Q Consensus 386 ~V~~~~~Da~~~~~~---~~~~fD~VllDaPCSg~ 417 (456)
+++++++|+..+... ...+||+|++|||+.+.
T Consensus 272 ~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~ 306 (396)
T 3c0k_A 272 KAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVE 306 (396)
T ss_dssp GEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTT
T ss_pred ceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCC
Confidence 589999999876432 13589999999999654
No 24
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.35 E-value=2e-12 Score=122.72 Aligned_cols=104 Identities=25% Similarity=0.324 Sum_probs=84.8
Q ss_pred ccccccch--HHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEE
Q 012783 313 GLCAVQDE--SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTI 390 (456)
Q Consensus 313 G~~~vQd~--ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~ 390 (456)
|++..+.. ...++..+....++.+|||+|||+|+.+..++.. .++|+++|+++.+++.+++|++..|+...+.++
T Consensus 56 ~~~~~~~~~~~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~ 132 (241)
T 3gdh_A 56 GWFSVTPEKIAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFI 132 (241)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE
T ss_pred ceeecCHHHHHHHHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEE
Confidence 34444444 4444444444557999999999999999999985 389999999999999999999999996559999
Q ss_pred ecccccccccCCCCccEEEEcCCCCCCcccc
Q 012783 391 HADLRTFADNSTVKCDKVLLDAPCSGLGVLS 421 (456)
Q Consensus 391 ~~Da~~~~~~~~~~fD~VllDaPCSg~G~ir 421 (456)
++|+..++. .++||+|++|+||.+.+...
T Consensus 133 ~~d~~~~~~--~~~~D~v~~~~~~~~~~~~~ 161 (241)
T 3gdh_A 133 CGDFLLLAS--FLKADVVFLSPPWGGPDYAT 161 (241)
T ss_dssp ESCHHHHGG--GCCCSEEEECCCCSSGGGGG
T ss_pred ECChHHhcc--cCCCCEEEECCCcCCcchhh
Confidence 999988763 36899999999999887654
No 25
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.34 E-value=4e-12 Score=139.59 Aligned_cols=106 Identities=16% Similarity=0.251 Sum_probs=90.8
Q ss_pred cccccccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC-ce
Q 012783 308 GLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN-SV 386 (456)
Q Consensus 308 ~~~~~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~-~~ 386 (456)
..++.|+|.-|.....++.... +|.+|||+|||+|+++++++.. +..+|+++|+|+.+++.+++|++.+|+. .+
T Consensus 517 ~~~~tG~f~d~r~~r~~l~~~~---~g~~VLDlg~GtG~~sl~aa~~--ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~ 591 (703)
T 3v97_A 517 DYLDTGLFLDHRIARRMLGQMS---KGKDFLNLFSYTGSATVHAGLG--GARSTTTVDMSRTYLEWAERNLRLNGLTGRA 591 (703)
T ss_dssp SSSSCSCCGGGHHHHHHHHHHC---TTCEEEEESCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCSTT
T ss_pred ccccCCCcccHHHHHHHHHHhc---CCCcEEEeeechhHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccc
Confidence 5678899999999988887754 5899999999999999999873 4568999999999999999999999997 45
Q ss_pred EEEEecccccccccCCCCccEEEEcCCCCCCc
Q 012783 387 IRTIHADLRTFADNSTVKCDKVLLDAPCSGLG 418 (456)
Q Consensus 387 V~~~~~Da~~~~~~~~~~fD~VllDaPCSg~G 418 (456)
++++++|+..+.....++||+|++||||.+.+
T Consensus 592 v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~~ 623 (703)
T 3v97_A 592 HRLIQADCLAWLREANEQFDLIFIDPPTFSNS 623 (703)
T ss_dssp EEEEESCHHHHHHHCCCCEEEEEECCCSBC--
T ss_pred eEEEecCHHHHHHhcCCCccEEEECCccccCC
Confidence 99999999886544457899999999997654
No 26
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.33 E-value=2.7e-12 Score=131.19 Aligned_cols=103 Identities=24% Similarity=0.264 Sum_probs=88.1
Q ss_pred ccccccccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCce
Q 012783 307 AGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSV 386 (456)
Q Consensus 307 ~~~~~~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~ 386 (456)
...++.|+|..|.....++..+ ++++|||+|||+|+++++++.. ..+|+++|+++.+++.+++|++.+|+.+
T Consensus 187 ~~~~~~g~f~~~~~~~~~~~~~----~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~- 258 (382)
T 1wxx_A 187 RAGQKTGAYLDQRENRLYMERF----RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGN- 258 (382)
T ss_dssp STTSCCCCCGGGHHHHHHGGGC----CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTT-
T ss_pred hhcccCccccchHHHHHHHHhc----CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCC-
Confidence 3567789999998887665544 7899999999999999999987 4789999999999999999999999988
Q ss_pred EEEEeccccccccc---CCCCccEEEEcCCCCCC
Q 012783 387 IRTIHADLRTFADN---STVKCDKVLLDAPCSGL 417 (456)
Q Consensus 387 V~~~~~Da~~~~~~---~~~~fD~VllDaPCSg~ 417 (456)
++++++|+..+... ...+||+|++|||+.+.
T Consensus 259 ~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~ 292 (382)
T 1wxx_A 259 VRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAK 292 (382)
T ss_dssp EEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCC
T ss_pred ceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCC
Confidence 89999999876432 13689999999999764
No 27
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.33 E-value=7.9e-12 Score=119.27 Aligned_cols=95 Identities=18% Similarity=0.207 Sum_probs=75.2
Q ss_pred ccchHHHHHHHhcC---CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecc
Q 012783 317 VQDESAGLVVAVVD---PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHAD 393 (456)
Q Consensus 317 vQd~ss~lv~~~l~---~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~D 393 (456)
.|..-+..+...++ +++|++|||+|||||++|.++|+.+++.|+|+|+|+++.+++.+.+.+++. .| |.++.+|
T Consensus 57 ~~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~n-v~~i~~D 133 (232)
T 3id6_C 57 FRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PN-IFPLLAD 133 (232)
T ss_dssp TTCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TT-EEEEECC
T ss_pred HHHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CC-eEEEEcc
Confidence 35555555555554 889999999999999999999999988999999999999987776666543 44 8899999
Q ss_pred cccccc--cCCCCccEEEEcCCC
Q 012783 394 LRTFAD--NSTVKCDKVLLDAPC 414 (456)
Q Consensus 394 a~~~~~--~~~~~fD~VllDaPC 414 (456)
+..... ...++||+|++|++-
T Consensus 134 a~~~~~~~~~~~~~D~I~~d~a~ 156 (232)
T 3id6_C 134 ARFPQSYKSVVENVDVLYVDIAQ 156 (232)
T ss_dssp TTCGGGTTTTCCCEEEEEECCCC
T ss_pred cccchhhhccccceEEEEecCCC
Confidence 976432 124689999999773
No 28
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.32 E-value=9.2e-12 Score=121.12 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=84.4
Q ss_pred cccccccchHHHHHHHhcCC--CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEE
Q 012783 312 EGLCAVQDESAGLVVAVVDP--QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRT 389 (456)
Q Consensus 312 ~G~~~vQd~ss~lv~~~l~~--~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~ 389 (456)
.|.+..+.....++..+++. .++.+|||+|||+|..+..++... +..+|+++|+|+.+++.+++|++++|+.+ +.+
T Consensus 86 ~~~~ipr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~-v~~ 163 (276)
T 2b3t_A 86 PATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKN-IHI 163 (276)
T ss_dssp TTSCCCCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCS-EEE
T ss_pred CCCcccCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEE
Confidence 34555555555555544432 568899999999999999999876 46799999999999999999999999875 899
Q ss_pred EecccccccccCCCCccEEEEcCCCCCCcc
Q 012783 390 IHADLRTFADNSTVKCDKVLLDAPCSGLGV 419 (456)
Q Consensus 390 ~~~Da~~~~~~~~~~fD~VllDaPCSg~G~ 419 (456)
+++|+..... .++||.|+++|||.+.+.
T Consensus 164 ~~~d~~~~~~--~~~fD~Iv~npPy~~~~~ 191 (276)
T 2b3t_A 164 LQSDWFSALA--GQQFAMIVSNPPYIDEQD 191 (276)
T ss_dssp ECCSTTGGGT--TCCEEEEEECCCCBCTTC
T ss_pred EEcchhhhcc--cCCccEEEECCCCCCccc
Confidence 9999976432 368999999999998754
No 29
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.32 E-value=3.3e-12 Score=122.58 Aligned_cols=101 Identities=15% Similarity=0.218 Sum_probs=85.2
Q ss_pred cccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccc
Q 012783 316 AVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLR 395 (456)
Q Consensus 316 ~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~ 395 (456)
.++...+.++..++...++.+|||+|||+|+.+..+++.+++.++|+++|+++.+++.+++++++.|+.++|+++.+|+.
T Consensus 46 ~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 125 (248)
T 3tfw_A 46 DVAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPAL 125 (248)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred ccCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 34566666666666667889999999999999999999887679999999999999999999999999877999999997
Q ss_pred cccccC--CCCccEEEEcCCCCC
Q 012783 396 TFADNS--TVKCDKVLLDAPCSG 416 (456)
Q Consensus 396 ~~~~~~--~~~fD~VllDaPCSg 416 (456)
...... .++||+|++|+++..
T Consensus 126 ~~l~~~~~~~~fD~V~~d~~~~~ 148 (248)
T 3tfw_A 126 QSLESLGECPAFDLIFIDADKPN 148 (248)
T ss_dssp HHHHTCCSCCCCSEEEECSCGGG
T ss_pred HHHHhcCCCCCeEEEEECCchHH
Confidence 743332 248999999998764
No 30
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.30 E-value=4.3e-12 Score=129.87 Aligned_cols=106 Identities=11% Similarity=0.147 Sum_probs=87.5
Q ss_pred cccccccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc-e
Q 012783 308 GLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS-V 386 (456)
Q Consensus 308 ~~~~~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~-~ 386 (456)
.++++|+|.-|.....++...+ .+|.+|||+|||+|+.++.+|.. +..+|+++|+++.+++.+++|++.+|+.+ +
T Consensus 189 ~~~~t~ff~~~~~~~~~~~~~~--~~~~~VLDl~cGtG~~sl~la~~--ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~ 264 (385)
T 2b78_A 189 DGLMTGIFLDQRQVRNELINGS--AAGKTVLNLFSYTAAFSVAAAMG--GAMATTSVDLAKRSRALSLAHFEANHLDMAN 264 (385)
T ss_dssp SSSCCSSCGGGHHHHHHHHHTT--TBTCEEEEETCTTTHHHHHHHHT--TBSEEEEEESCTTHHHHHHHHHHHTTCCCTT
T ss_pred ccccCCcCCcHHHHHHHHHHHh--cCCCeEEEEeeccCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCccc
Confidence 5567899977888877877665 57899999999999999999974 34589999999999999999999999974 4
Q ss_pred EEEEeccccccccc---CCCCccEEEEcCCCCCC
Q 012783 387 IRTIHADLRTFADN---STVKCDKVLLDAPCSGL 417 (456)
Q Consensus 387 V~~~~~Da~~~~~~---~~~~fD~VllDaPCSg~ 417 (456)
++++++|+..+... ...+||+|++|||+.+.
T Consensus 265 v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~ 298 (385)
T 2b78_A 265 HQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFAR 298 (385)
T ss_dssp EEEEESCHHHHHHHHHHTTCCEEEEEECCCCC--
T ss_pred eEEEECCHHHHHHHHHHhCCCccEEEECCCCCCC
Confidence 89999999775321 13589999999999754
No 31
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.30 E-value=7e-12 Score=128.58 Aligned_cols=106 Identities=26% Similarity=0.270 Sum_probs=89.1
Q ss_pred cccccccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceE
Q 012783 308 GLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVI 387 (456)
Q Consensus 308 ~~~~~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V 387 (456)
..+++|+|..|.....++..++ +++++|||+|||+|++++.++.. +.++|+++|+++.+++.+++|++.+|+.+++
T Consensus 194 ~~~~tg~f~~~~~~~~~~~~~~--~~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v 269 (396)
T 2as0_A 194 RGQKTGFFLDQRENRLALEKWV--QPGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAIETAKENAKLNGVEDRM 269 (396)
T ss_dssp SSSSSCCCSTTHHHHHHHGGGC--CTTCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCGGGE
T ss_pred cccccCccCCHHHHHHHHHHHh--hCCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccc
Confidence 5577799988888877776553 47899999999999999999985 4569999999999999999999999997458
Q ss_pred EEEeccccccccc---CCCCccEEEEcCCCCCC
Q 012783 388 RTIHADLRTFADN---STVKCDKVLLDAPCSGL 417 (456)
Q Consensus 388 ~~~~~Da~~~~~~---~~~~fD~VllDaPCSg~ 417 (456)
+++++|+..+... ...+||+|++|||+.+.
T Consensus 270 ~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~ 302 (396)
T 2as0_A 270 KFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQ 302 (396)
T ss_dssp EEEESCHHHHHHHHHHTTCCEEEEEECCCCSCS
T ss_pred eEEECCHHHHHHHHHhhCCCCCEEEECCCCCCC
Confidence 9999999776432 13689999999998753
No 32
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.30 E-value=3.7e-12 Score=130.43 Aligned_cols=106 Identities=18% Similarity=0.094 Sum_probs=84.8
Q ss_pred cccccc-ccchHHHHHHH---hcCC--CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012783 311 KEGLCA-VQDESAGLVVA---VVDP--QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (456)
Q Consensus 311 ~~G~~~-vQd~ss~lv~~---~l~~--~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~ 384 (456)
..|+|. .|.....++.. .+.. ++|.+|||+|||+|++++.+|..+++.++|+++|+++.+++.+++|++.+|+.
T Consensus 24 ~~~Ffn~~~~~nR~l~~~~~~~~~~~~~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~ 103 (392)
T 3axs_A 24 MPVFYNPRMRVNRDLAVLGLEYLCKKLGRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP 103 (392)
T ss_dssp CCSSCCGGGHHHHHHHHHHHHHHHHHHCSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEcCCcHHHHHHHHHHHHHHhhccCCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC
Confidence 345552 45555555432 2222 57899999999999999999998655579999999999999999999999998
Q ss_pred ce-EEEEecccccccc-cCCCCccEEEEcCCCCC
Q 012783 385 SV-IRTIHADLRTFAD-NSTVKCDKVLLDAPCSG 416 (456)
Q Consensus 385 ~~-V~~~~~Da~~~~~-~~~~~fD~VllDaPCSg 416 (456)
++ ++++++|+..+.. ...+.||+|++||+|+.
T Consensus 104 ~~~v~v~~~Da~~~l~~~~~~~fD~V~lDP~g~~ 137 (392)
T 3axs_A 104 EDRYEIHGMEANFFLRKEWGFGFDYVDLDPFGTP 137 (392)
T ss_dssp GGGEEEECSCHHHHHHSCCSSCEEEEEECCSSCC
T ss_pred CceEEEEeCCHHHHHHHhhCCCCcEEEECCCcCH
Confidence 87 8999999988765 44468999999998764
No 33
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.30 E-value=7.4e-12 Score=118.36 Aligned_cols=100 Identities=13% Similarity=0.094 Sum_probs=81.1
Q ss_pred cccchHHHHHHHh---cCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEEe
Q 012783 316 AVQDESAGLVVAV---VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN-SVIRTIH 391 (456)
Q Consensus 316 ~vQd~ss~lv~~~---l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~-~~V~~~~ 391 (456)
.++.....++..+ ..++++.+|||+|||+|..|+.+++.+++.++|+++|+++++++.+++++++.|+. ++|++++
T Consensus 36 ~i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~ 115 (221)
T 3dr5_A 36 APDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLL 115 (221)
T ss_dssp CCCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE
Confidence 3444444444433 34445569999999999999999998877899999999999999999999999998 6799999
Q ss_pred cccccccccC-CCCccEEEEcCCCC
Q 012783 392 ADLRTFADNS-TVKCDKVLLDAPCS 415 (456)
Q Consensus 392 ~Da~~~~~~~-~~~fD~VllDaPCS 415 (456)
+|+.++.... .++||.|++|++..
T Consensus 116 gda~~~l~~~~~~~fD~V~~d~~~~ 140 (221)
T 3dr5_A 116 SRPLDVMSRLANDSYQLVFGQVSPM 140 (221)
T ss_dssp SCHHHHGGGSCTTCEEEEEECCCTT
T ss_pred cCHHHHHHHhcCCCcCeEEEcCcHH
Confidence 9998765433 47899999998754
No 34
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.30 E-value=3.1e-12 Score=119.89 Aligned_cols=101 Identities=16% Similarity=0.176 Sum_probs=84.8
Q ss_pred cccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccc
Q 012783 316 AVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLR 395 (456)
Q Consensus 316 ~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~ 395 (456)
.++...+.++..++...++.+|||+|||+|+.+.++++.+++.++|+++|+++.+++.+++++++.|+.++++++++|+.
T Consensus 41 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 120 (223)
T 3duw_A 41 DVSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLAL 120 (223)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred ccCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 34566666766666667889999999999999999999887578999999999999999999999999888999999997
Q ss_pred ccccc----CCCCccEEEEcCCCCC
Q 012783 396 TFADN----STVKCDKVLLDAPCSG 416 (456)
Q Consensus 396 ~~~~~----~~~~fD~VllDaPCSg 416 (456)
..... ..++||.|++|++|+.
T Consensus 121 ~~~~~~~~~~~~~fD~v~~d~~~~~ 145 (223)
T 3duw_A 121 DSLQQIENEKYEPFDFIFIDADKQN 145 (223)
T ss_dssp HHHHHHHHTTCCCCSEEEECSCGGG
T ss_pred HHHHHHHhcCCCCcCEEEEcCCcHH
Confidence 64321 1257999999999774
No 35
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.30 E-value=7.3e-12 Score=122.60 Aligned_cols=101 Identities=21% Similarity=0.290 Sum_probs=83.5
Q ss_pred cccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecc
Q 012783 314 LCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHAD 393 (456)
Q Consensus 314 ~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~D 393 (456)
+..-+......++.. .++|++|||+|||+|++++.+|.. +..+|+|+|+|+..++.+++|++.+|+.++|+++++|
T Consensus 108 f~~~~~~er~ri~~~--~~~g~~VlD~~aG~G~~~i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D 183 (278)
T 3k6r_A 108 FSPANVKERVRMAKV--AKPDELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMD 183 (278)
T ss_dssp CCGGGHHHHHHHHHH--CCTTCEEEETTCTTTTTTHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC
T ss_pred EcCCcHHHHHHHHHh--cCCCCEEEEecCcCcHHHHHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCc
Confidence 333344444445554 467999999999999999999986 4568999999999999999999999999999999999
Q ss_pred cccccccCCCCccEEEEcCCCCCCccc
Q 012783 394 LRTFADNSTVKCDKVLLDAPCSGLGVL 420 (456)
Q Consensus 394 a~~~~~~~~~~fD~VllDaPCSg~G~i 420 (456)
++.+.. .+.||+|++|+|+++...+
T Consensus 184 ~~~~~~--~~~~D~Vi~~~p~~~~~~l 208 (278)
T 3k6r_A 184 NRDFPG--ENIADRILMGYVVRTHEFI 208 (278)
T ss_dssp TTTCCC--CSCEEEEEECCCSSGGGGH
T ss_pred HHHhcc--ccCCCEEEECCCCcHHHHH
Confidence 988764 3689999999999876543
No 36
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.29 E-value=5.5e-12 Score=120.26 Aligned_cols=103 Identities=18% Similarity=0.141 Sum_probs=86.6
Q ss_pred cccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecc
Q 012783 314 LCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHAD 393 (456)
Q Consensus 314 ~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~D 393 (456)
...++.....++..++...++.+|||+|||+|+.+..+++.+++.++|+++|+++.+++.+++++++.|+.++|+++.+|
T Consensus 51 ~~~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd 130 (237)
T 3c3y_A 51 YMSTSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESD 130 (237)
T ss_dssp GGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC
T ss_pred CCCcCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 44556666777766666667889999999999999999999876799999999999999999999999998789999999
Q ss_pred cccccccC------CCCccEEEEcCCCCC
Q 012783 394 LRTFADNS------TVKCDKVLLDAPCSG 416 (456)
Q Consensus 394 a~~~~~~~------~~~fD~VllDaPCSg 416 (456)
+....... .++||.|++|++|..
T Consensus 131 a~~~l~~l~~~~~~~~~fD~I~~d~~~~~ 159 (237)
T 3c3y_A 131 AMLALDNLLQGQESEGSYDFGFVDADKPN 159 (237)
T ss_dssp HHHHHHHHHHSTTCTTCEEEEEECSCGGG
T ss_pred HHHHHHHHHhccCCCCCcCEEEECCchHH
Confidence 97653211 368999999998763
No 37
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.29 E-value=5e-12 Score=119.48 Aligned_cols=104 Identities=14% Similarity=0.170 Sum_probs=90.8
Q ss_pred ccccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEE
Q 012783 311 KEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTI 390 (456)
Q Consensus 311 ~~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~ 390 (456)
..|...+|...+.++...+...++.+|||+|||+|..+..+++.++ .++|+++|+++.+++.+++++++.|+.++|.++
T Consensus 32 ~~~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~ 110 (233)
T 2gpy_A 32 EQQVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELL 110 (233)
T ss_dssp HTTCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred HcCCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE
Confidence 4577788999999998888888899999999999999999999874 689999999999999999999999997679999
Q ss_pred ecccccccccC--CCCccEEEEcCCCC
Q 012783 391 HADLRTFADNS--TVKCDKVLLDAPCS 415 (456)
Q Consensus 391 ~~Da~~~~~~~--~~~fD~VllDaPCS 415 (456)
.+|+....... .++||+|++|+||+
T Consensus 111 ~~d~~~~~~~~~~~~~fD~I~~~~~~~ 137 (233)
T 2gpy_A 111 FGDALQLGEKLELYPLFDVLFIDAAKG 137 (233)
T ss_dssp CSCGGGSHHHHTTSCCEEEEEEEGGGS
T ss_pred ECCHHHHHHhcccCCCccEEEECCCHH
Confidence 99998743222 36899999999986
No 38
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.28 E-value=2.3e-11 Score=116.32 Aligned_cols=104 Identities=25% Similarity=0.351 Sum_probs=88.5
Q ss_pred cccccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEE
Q 012783 310 LKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRT 389 (456)
Q Consensus 310 ~~~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~ 389 (456)
+..+.-.+....+..+...+++.++.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++..|+.+++++
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~ 149 (255)
T 3mb5_A 70 MKRGPQIVHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTI 149 (255)
T ss_dssp SCCCSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEE
T ss_pred CccccccccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEE
Confidence 33444445555666778888999999999999999999999999877789999999999999999999999999888999
Q ss_pred EecccccccccCCCCccEEEEcCCCC
Q 012783 390 IHADLRTFADNSTVKCDKVLLDAPCS 415 (456)
Q Consensus 390 ~~~Da~~~~~~~~~~fD~VllDaPCS 415 (456)
+++|+.... ..++||.|++|+|+.
T Consensus 150 ~~~d~~~~~--~~~~~D~v~~~~~~~ 173 (255)
T 3mb5_A 150 KLKDIYEGI--EEENVDHVILDLPQP 173 (255)
T ss_dssp ECSCGGGCC--CCCSEEEEEECSSCG
T ss_pred EECchhhcc--CCCCcCEEEECCCCH
Confidence 999998642 235799999999865
No 39
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.27 E-value=1.3e-12 Score=125.21 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=89.0
Q ss_pred ccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEec
Q 012783 313 GLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA 392 (456)
Q Consensus 313 G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~ 392 (456)
+.+.++...+.++..++...++.+|||+|||+|..|+.+|+.+++.++|+++|+++++++.+++++++.|+.++|+++++
T Consensus 40 ~~~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g 119 (242)
T 3r3h_A 40 ANMQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLG 119 (242)
T ss_dssp GGTSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEES
T ss_pred CCCccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc
Confidence 44667788888888877777889999999999999999999887679999999999999999999999999877999999
Q ss_pred ccccccccC-----CCCccEEEEcCCCC
Q 012783 393 DLRTFADNS-----TVKCDKVLLDAPCS 415 (456)
Q Consensus 393 Da~~~~~~~-----~~~fD~VllDaPCS 415 (456)
|+..+.... .++||.|++|+++.
T Consensus 120 da~~~l~~~~~~~~~~~fD~V~~d~~~~ 147 (242)
T 3r3h_A 120 PALDTLHSLLNEGGEHQFDFIFIDADKT 147 (242)
T ss_dssp CHHHHHHHHHHHHCSSCEEEEEEESCGG
T ss_pred CHHHHHHHHhhccCCCCEeEEEEcCChH
Confidence 997654322 36899999998854
No 40
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.26 E-value=7.4e-12 Score=127.86 Aligned_cols=101 Identities=16% Similarity=0.151 Sum_probs=80.8
Q ss_pred ccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc---------------
Q 012783 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--------------- 381 (456)
Q Consensus 317 vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~--------------- 381 (456)
.|.....+....+...++.+|||+|||+|.+++.++..++ ..+|+++|+++.+++.+++|++++
T Consensus 31 ~~~~nr~l~~~~l~~~~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~ 109 (378)
T 2dul_A 31 RMALNRDIVVVLLNILNPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILK 109 (378)
T ss_dssp GGHHHHHHHHHHHHHHCCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEE
T ss_pred chHHHHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhccccccccccccccc
Confidence 3555554433333223789999999999999999999864 467999999999999999999999
Q ss_pred CCCceEEEEecccccccccCCCCccEEEEcCCCCCCcc
Q 012783 382 QVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGV 419 (456)
Q Consensus 382 g~~~~V~~~~~Da~~~~~~~~~~fD~VllDaPCSg~G~ 419 (456)
|+.+ ++++++|+..+.......||.|++||||+....
T Consensus 110 gl~~-i~v~~~Da~~~~~~~~~~fD~I~lDP~~~~~~~ 146 (378)
T 2dul_A 110 GEKT-IVINHDDANRLMAERHRYFHFIDLDPFGSPMEF 146 (378)
T ss_dssp SSSE-EEEEESCHHHHHHHSTTCEEEEEECCSSCCHHH
T ss_pred CCCc-eEEEcCcHHHHHHhccCCCCEEEeCCCCCHHHH
Confidence 8877 899999998775443457999999999985443
No 41
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.26 E-value=1.5e-11 Score=116.65 Aligned_cols=104 Identities=14% Similarity=0.135 Sum_probs=87.9
Q ss_pred ccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEec
Q 012783 313 GLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA 392 (456)
Q Consensus 313 G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~ 392 (456)
+...+|.....++..++...++.+|||+|||+|..+..++... +.++|+++|+++.+++.++++++..|+.++|+++++
T Consensus 51 ~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 129 (232)
T 3ntv_A 51 EVPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEG 129 (232)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred CCCCcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC
Confidence 4555677777777777777788999999999999999999853 478999999999999999999999999766999999
Q ss_pred ccccccc-cCCCCccEEEEcCCCCCC
Q 012783 393 DLRTFAD-NSTVKCDKVLLDAPCSGL 417 (456)
Q Consensus 393 Da~~~~~-~~~~~fD~VllDaPCSg~ 417 (456)
|+..... ...++||.|++|+++...
T Consensus 130 d~~~~~~~~~~~~fD~V~~~~~~~~~ 155 (232)
T 3ntv_A 130 NALEQFENVNDKVYDMIFIDAAKAQS 155 (232)
T ss_dssp CGGGCHHHHTTSCEEEEEEETTSSSH
T ss_pred CHHHHHHhhccCCccEEEEcCcHHHH
Confidence 9987544 335789999999987653
No 42
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.26 E-value=6.3e-12 Score=117.79 Aligned_cols=103 Identities=15% Similarity=0.142 Sum_probs=86.7
Q ss_pred ccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEec
Q 012783 313 GLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA 392 (456)
Q Consensus 313 G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~ 392 (456)
+.+.++...+.++..++...++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++..|+.++|+++++
T Consensus 44 ~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 123 (225)
T 3tr6_A 44 YAMQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLS 123 (225)
T ss_dssp GGGSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred CccccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeC
Confidence 33556677777777777777889999999999999999999887678999999999999999999999999888999999
Q ss_pred ccccccccCC-----CCccEEEEcCCCC
Q 012783 393 DLRTFADNST-----VKCDKVLLDAPCS 415 (456)
Q Consensus 393 Da~~~~~~~~-----~~fD~VllDaPCS 415 (456)
|+........ ++||.|++|++..
T Consensus 124 d~~~~~~~~~~~~~~~~fD~v~~~~~~~ 151 (225)
T 3tr6_A 124 PAKDTLAELIHAGQAWQYDLIYIDADKA 151 (225)
T ss_dssp CHHHHHHHHHTTTCTTCEEEEEECSCGG
T ss_pred CHHHHHHHhhhccCCCCccEEEECCCHH
Confidence 9966532211 6899999999854
No 43
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.25 E-value=1.9e-11 Score=112.07 Aligned_cols=85 Identities=15% Similarity=0.244 Sum_probs=76.0
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEE
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vl 409 (456)
.++++++|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++..|+.+++.++++|+..++....++||.|+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 45789999999999999999999988667899999999999999999999999865699999999887654457899999
Q ss_pred EcCCC
Q 012783 410 LDAPC 414 (456)
Q Consensus 410 lDaPC 414 (456)
+|+|.
T Consensus 99 ~~~~~ 103 (197)
T 3eey_A 99 FNLGY 103 (197)
T ss_dssp EEESB
T ss_pred EcCCc
Confidence 99876
No 44
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.25 E-value=1.1e-11 Score=119.01 Aligned_cols=102 Identities=16% Similarity=0.155 Sum_probs=86.5
Q ss_pred cccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecc
Q 012783 314 LCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHAD 393 (456)
Q Consensus 314 ~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~D 393 (456)
...++.....++..++...++.+|||+|||+|+.++.+++.+++.++|+++|+++.+++.+++++++.|+.++|+++.+|
T Consensus 60 ~~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gd 139 (247)
T 1sui_A 60 IMTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGP 139 (247)
T ss_dssp GGSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC
T ss_pred CCCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC
Confidence 45567777777777766677889999999999999999999876789999999999999999999999997779999999
Q ss_pred cccccccC------CCCccEEEEcCCCC
Q 012783 394 LRTFADNS------TVKCDKVLLDAPCS 415 (456)
Q Consensus 394 a~~~~~~~------~~~fD~VllDaPCS 415 (456)
+....... .++||.|++|+++.
T Consensus 140 a~~~l~~l~~~~~~~~~fD~V~~d~~~~ 167 (247)
T 1sui_A 140 ALPVLDEMIKDEKNHGSYDFIFVDADKD 167 (247)
T ss_dssp HHHHHHHHHHSGGGTTCBSEEEECSCST
T ss_pred HHHHHHHHHhccCCCCCEEEEEEcCchH
Confidence 97653211 36899999999864
No 45
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.25 E-value=8.4e-12 Score=123.60 Aligned_cols=91 Identities=22% Similarity=0.306 Sum_probs=77.9
Q ss_pred HHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccC--
Q 012783 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-- 401 (456)
Q Consensus 324 lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~-- 401 (456)
.++..+.+++|.+|||+|||+|+.|..+++..+ .++|+|+|+|+.+++.+++|++.+| . +++++++|+..++...
T Consensus 17 e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g-~-~v~~v~~d~~~l~~~l~~ 93 (301)
T 1m6y_A 17 EVIEFLKPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS-D-RVSLFKVSYREADFLLKT 93 (301)
T ss_dssp HHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT-T-TEEEEECCGGGHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC-C-cEEEEECCHHHHHHHHHh
Confidence 456677888999999999999999999999875 6899999999999999999999888 4 4899999998764211
Q ss_pred --CCCccEEEEcCCCCCC
Q 012783 402 --TVKCDKVLLDAPCSGL 417 (456)
Q Consensus 402 --~~~fD~VllDaPCSg~ 417 (456)
..+||.|++|+|||..
T Consensus 94 ~g~~~~D~Vl~D~gvSs~ 111 (301)
T 1m6y_A 94 LGIEKVDGILMDLGVSTY 111 (301)
T ss_dssp TTCSCEEEEEEECSCCHH
T ss_pred cCCCCCCEEEEcCccchh
Confidence 1479999999999853
No 46
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.24 E-value=8.2e-11 Score=108.68 Aligned_cols=100 Identities=14% Similarity=0.186 Sum_probs=83.5
Q ss_pred cccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEe
Q 012783 312 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH 391 (456)
Q Consensus 312 ~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~ 391 (456)
+|.+ .+++....+...+.+.++.+|||+|||+|..+..++... +.++|+++|+++.+++.++++++..|+.+ +++++
T Consensus 20 ~g~~-~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~ 96 (204)
T 3e05_A 20 KKLI-TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVARN-VTLVE 96 (204)
T ss_dssp TTTS-CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCTT-EEEEE
T ss_pred CCcC-ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEe
Confidence 3666 555555667778889999999999999999999999884 46899999999999999999999999965 89999
Q ss_pred cccccccccCCCCccEEEEcCCCC
Q 012783 392 ADLRTFADNSTVKCDKVLLDAPCS 415 (456)
Q Consensus 392 ~Da~~~~~~~~~~fD~VllDaPCS 415 (456)
+|+....... ..||.|+++.+..
T Consensus 97 ~d~~~~~~~~-~~~D~i~~~~~~~ 119 (204)
T 3e05_A 97 AFAPEGLDDL-PDPDRVFIGGSGG 119 (204)
T ss_dssp CCTTTTCTTS-CCCSEEEESCCTT
T ss_pred CChhhhhhcC-CCCCEEEECCCCc
Confidence 9986554332 5799999998764
No 47
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.23 E-value=3.1e-11 Score=117.88 Aligned_cols=102 Identities=20% Similarity=0.236 Sum_probs=83.6
Q ss_pred ccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEec
Q 012783 313 GLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA 392 (456)
Q Consensus 313 G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~ 392 (456)
+++..|......+... .++|++|||+|||+|+.++.++.... .+|+|+|+++.+++.+++|++.+|+.+.++++++
T Consensus 107 ~f~~~~~~~~~~l~~~--~~~~~~VLDlgcG~G~~~~~la~~~~--~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~ 182 (278)
T 2frn_A 107 MFSPANVKERVRMAKV--AKPDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM 182 (278)
T ss_dssp CCCGGGHHHHHHHHHH--CCTTCEEEETTCTTTTTHHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred eEcCCcHHHHHHHHHh--CCCCCEEEEecccCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEEC
Confidence 3444444666665555 35799999999999999999998732 2799999999999999999999999888999999
Q ss_pred ccccccccCCCCccEEEEcCCCCCCccc
Q 012783 393 DLRTFADNSTVKCDKVLLDAPCSGLGVL 420 (456)
Q Consensus 393 Da~~~~~~~~~~fD~VllDaPCSg~G~i 420 (456)
|+..+.. .++||+|++|+|++....+
T Consensus 183 D~~~~~~--~~~fD~Vi~~~p~~~~~~l 208 (278)
T 2frn_A 183 DNRDFPG--ENIADRILMGYVVRTHEFI 208 (278)
T ss_dssp CTTTCCC--CSCEEEEEECCCSSGGGGH
T ss_pred CHHHhcc--cCCccEEEECCchhHHHHH
Confidence 9988765 4689999999998765444
No 48
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.23 E-value=1.1e-10 Score=109.65 Aligned_cols=86 Identities=8% Similarity=0.079 Sum_probs=71.5
Q ss_pred CCCCCCeEEEEcCC-CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEE
Q 012783 330 DPQPGQSIVDCCAA-PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKV 408 (456)
Q Consensus 330 ~~~~g~~VLDlcAG-pGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~V 408 (456)
.+.++.+|||+||| +|..+..++... .++|+++|+++.+++.+++|++..|+ + ++++++|+..+.....++||.|
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~-v~~~~~d~~~~~~~~~~~fD~I 127 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS-N-VRLVKSNGGIIKGVVEGTFDVI 127 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC-C-CEEEECSSCSSTTTCCSCEEEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC-C-cEEEeCCchhhhhcccCceeEE
Confidence 35689999999999 999999999875 57999999999999999999999998 4 8999999754433334789999
Q ss_pred EEcCCCCCCcc
Q 012783 409 LLDAPCSGLGV 419 (456)
Q Consensus 409 llDaPCSg~G~ 419 (456)
++|+|+...+.
T Consensus 128 ~~npp~~~~~~ 138 (230)
T 3evz_A 128 FSAPPYYDKPL 138 (230)
T ss_dssp EECCCCC----
T ss_pred EECCCCcCCcc
Confidence 99999987665
No 49
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.23 E-value=1e-10 Score=118.03 Aligned_cols=99 Identities=26% Similarity=0.360 Sum_probs=84.4
Q ss_pred ccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccc
Q 012783 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (456)
Q Consensus 315 ~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da 394 (456)
..++..-+..++..+...++..|||+|||+|+.+..++...++...|+++|+++.+++.+++|++..|+. .++++++|+
T Consensus 185 a~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~ 263 (354)
T 3tma_A 185 GSLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADA 263 (354)
T ss_dssp CSCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCG
T ss_pred CCcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCCh
Confidence 3344555556677778889999999999999999999998645689999999999999999999999998 589999999
Q ss_pred ccccccCCCCccEEEEcCCCC
Q 012783 395 RTFADNSTVKCDKVLLDAPCS 415 (456)
Q Consensus 395 ~~~~~~~~~~fD~VllDaPCS 415 (456)
..++... ..||.|++||||.
T Consensus 264 ~~~~~~~-~~~D~Ii~npPyg 283 (354)
T 3tma_A 264 RHLPRFF-PEVDRILANPPHG 283 (354)
T ss_dssp GGGGGTC-CCCSEEEECCCSC
T ss_pred hhCcccc-CCCCEEEECCCCc
Confidence 9876543 5689999999994
No 50
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.22 E-value=4.1e-11 Score=109.51 Aligned_cols=82 Identities=17% Similarity=0.216 Sum_probs=71.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccC-CCCccEEEE
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-TVKCDKVLL 410 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~-~~~fD~Vll 410 (456)
.++.+|||+|||+|..+..+++. +..+|+++|+++.+++.+++|++..++++ ++++++|+..+.... .++||.|++
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~~~fD~i~~ 119 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGLSG-ATLRRGAVAAVVAAGTTSPVDLVLA 119 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTCSC-EEEEESCHHHHHHHCCSSCCSEEEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCCCc-eEEEEccHHHHHhhccCCCccEEEE
Confidence 57899999999999999988874 45689999999999999999999999954 899999998875422 478999999
Q ss_pred cCCCCC
Q 012783 411 DAPCSG 416 (456)
Q Consensus 411 DaPCSg 416 (456)
|+|...
T Consensus 120 ~~p~~~ 125 (189)
T 3p9n_A 120 DPPYNV 125 (189)
T ss_dssp CCCTTS
T ss_pred CCCCCc
Confidence 999765
No 51
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.21 E-value=6.5e-11 Score=115.33 Aligned_cols=97 Identities=25% Similarity=0.232 Sum_probs=80.3
Q ss_pred cccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecc
Q 012783 314 LCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHAD 393 (456)
Q Consensus 314 ~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~D 393 (456)
+|..|.........+..+.++++|||+|||+|..++.+|...+ .++|+|+|+++.+++.+++|++.+|+.+ +.++++|
T Consensus 100 ~f~~~~~~~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~-~~~~~~d 177 (272)
T 3a27_A 100 IMWSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNN-VIPILAD 177 (272)
T ss_dssp SCCCGGGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSS-EEEEESC
T ss_pred EEECCCchHHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCC-EEEEECC
Confidence 4445554444444445577899999999999999999999753 5799999999999999999999999987 7899999
Q ss_pred cccccccCCCCccEEEEcCCC
Q 012783 394 LRTFADNSTVKCDKVLLDAPC 414 (456)
Q Consensus 394 a~~~~~~~~~~fD~VllDaPC 414 (456)
+..+ .. .+.||.|++|+|.
T Consensus 178 ~~~~-~~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 178 NRDV-EL-KDVADRVIMGYVH 196 (272)
T ss_dssp GGGC-CC-TTCEEEEEECCCS
T ss_pred hHHc-Cc-cCCceEEEECCcc
Confidence 9887 33 4689999999997
No 52
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.20 E-value=2.1e-11 Score=113.35 Aligned_cols=102 Identities=14% Similarity=0.103 Sum_probs=83.2
Q ss_pred ccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEec
Q 012783 313 GLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA 392 (456)
Q Consensus 313 G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~ 392 (456)
|...++.....++..++...++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++..|+.++++++++
T Consensus 36 ~~p~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 115 (210)
T 3c3p_A 36 NIPIVDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVG 115 (210)
T ss_dssp TCCCCCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEES
T ss_pred CCCCcCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEe
Confidence 33445556666665555555678999999999999999999876578999999999999999999999999877999999
Q ss_pred ccccccccCCCCccEEEEcCCCC
Q 012783 393 DLRTFADNSTVKCDKVLLDAPCS 415 (456)
Q Consensus 393 Da~~~~~~~~~~fD~VllDaPCS 415 (456)
|+..+.....+ ||.|++|+++.
T Consensus 116 d~~~~~~~~~~-fD~v~~~~~~~ 137 (210)
T 3c3p_A 116 DPLGIAAGQRD-IDILFMDCDVF 137 (210)
T ss_dssp CHHHHHTTCCS-EEEEEEETTTS
T ss_pred cHHHHhccCCC-CCEEEEcCChh
Confidence 99765333345 99999998764
No 53
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.19 E-value=1.5e-10 Score=107.79 Aligned_cols=92 Identities=12% Similarity=0.208 Sum_probs=78.0
Q ss_pred ccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccc
Q 012783 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 396 (456)
Q Consensus 317 vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~ 396 (456)
.+.+....+...+.+.++++|||+|||+|..+..++.. .++|+++|+++.+++.++++++++|+.+++.++++|+..
T Consensus 39 ~~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 115 (204)
T 3njr_A 39 TKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA 115 (204)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG
T ss_pred CcHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh
Confidence 34445556677888999999999999999999999986 579999999999999999999999998458999999987
Q ss_pred ccccCCCCccEEEEcC
Q 012783 397 FADNSTVKCDKVLLDA 412 (456)
Q Consensus 397 ~~~~~~~~fD~VllDa 412 (456)
..... ..||.|+++.
T Consensus 116 ~~~~~-~~~D~v~~~~ 130 (204)
T 3njr_A 116 ALADL-PLPEAVFIGG 130 (204)
T ss_dssp GGTTS-CCCSEEEECS
T ss_pred hcccC-CCCCEEEECC
Confidence 43332 5799999876
No 54
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.18 E-value=6.9e-11 Score=106.48 Aligned_cols=88 Identities=18% Similarity=0.281 Sum_probs=73.9
Q ss_pred HHhcC-CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCC
Q 012783 326 VAVVD-PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVK 404 (456)
Q Consensus 326 ~~~l~-~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~ 404 (456)
...+. ..++.+|||+|||+|..+..+++. +.++|+++|+++.+++.++++++..|+.+++.++++|+..+.....+.
T Consensus 23 ~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 100 (177)
T 2esr_A 23 FNMIGPYFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGR 100 (177)
T ss_dssp HHHHCSCCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSC
T ss_pred HHHHHhhcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCC
Confidence 33444 567899999999999999999886 457999999999999999999999998766999999998753333357
Q ss_pred ccEEEEcCCCC
Q 012783 405 CDKVLLDAPCS 415 (456)
Q Consensus 405 fD~VllDaPCS 415 (456)
||+|++|+|+.
T Consensus 101 fD~i~~~~~~~ 111 (177)
T 2esr_A 101 FDLVFLDPPYA 111 (177)
T ss_dssp EEEEEECCSSH
T ss_pred CCEEEECCCCC
Confidence 99999999973
No 55
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.17 E-value=7.6e-11 Score=112.43 Aligned_cols=86 Identities=17% Similarity=0.200 Sum_probs=73.2
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc--cCCCCcc
Q 012783 329 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD--NSTVKCD 406 (456)
Q Consensus 329 l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~--~~~~~fD 406 (456)
+.++||++|||+|||+|..+.++|..+++.|+|+|+|+++++++.+++++++.+ | +..+.+|+..... ...+.||
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~--n-i~~V~~d~~~p~~~~~~~~~vD 149 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR--N-IFPILGDARFPEKYRHLVEGVD 149 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT--T-EEEEESCTTCGGGGTTTCCCEE
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc--C-eeEEEEeccCccccccccceEE
Confidence 568999999999999999999999999999999999999999999999877653 4 7788888865432 2346899
Q ss_pred EEEEcCCCCCC
Q 012783 407 KVLLDAPCSGL 417 (456)
Q Consensus 407 ~VllDaPCSg~ 417 (456)
.|++|.+....
T Consensus 150 vVf~d~~~~~~ 160 (233)
T 4df3_A 150 GLYADVAQPEQ 160 (233)
T ss_dssp EEEECCCCTTH
T ss_pred EEEEeccCChh
Confidence 99999998753
No 56
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.17 E-value=2e-10 Score=106.27 Aligned_cols=98 Identities=15% Similarity=0.138 Sum_probs=83.9
Q ss_pred ccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEec
Q 012783 313 GLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA 392 (456)
Q Consensus 313 G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~ 392 (456)
|.+..+......+...+.+.++.+|||+|||+|..+..++.. .++|+++|+++.+++.++++++..|+.+ ++++++
T Consensus 57 ~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~ 132 (210)
T 3lbf_A 57 GQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLHN-VSTRHG 132 (210)
T ss_dssp SCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEES
T ss_pred CCEeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCc-eEEEEC
Confidence 555566666777788889999999999999999999999987 4799999999999999999999999986 899999
Q ss_pred ccccccccCCCCccEEEEcCCCC
Q 012783 393 DLRTFADNSTVKCDKVLLDAPCS 415 (456)
Q Consensus 393 Da~~~~~~~~~~fD~VllDaPCS 415 (456)
|+...... .++||+|+++..+.
T Consensus 133 d~~~~~~~-~~~~D~i~~~~~~~ 154 (210)
T 3lbf_A 133 DGWQGWQA-RAPFDAIIVTAAPP 154 (210)
T ss_dssp CGGGCCGG-GCCEEEEEESSBCS
T ss_pred CcccCCcc-CCCccEEEEccchh
Confidence 99775433 36899999986553
No 57
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.17 E-value=1.7e-10 Score=112.05 Aligned_cols=93 Identities=15% Similarity=0.254 Sum_probs=80.7
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc
Q 012783 321 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN 400 (456)
Q Consensus 321 ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~ 400 (456)
....++..+++.++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.+++|++..|+.+++.++.+|+....
T Consensus 100 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 177 (277)
T 1o54_A 100 DSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF-- 177 (277)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC--
T ss_pred HHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc--
Confidence 334667778899999999999999999999999877678999999999999999999999998556999999997652
Q ss_pred CCCCccEEEEcCCCC
Q 012783 401 STVKCDKVLLDAPCS 415 (456)
Q Consensus 401 ~~~~fD~VllDaPCS 415 (456)
..+.||+|++|+|+.
T Consensus 178 ~~~~~D~V~~~~~~~ 192 (277)
T 1o54_A 178 DEKDVDALFLDVPDP 192 (277)
T ss_dssp SCCSEEEEEECCSCG
T ss_pred cCCccCEEEECCcCH
Confidence 235799999999864
No 58
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.16 E-value=2.2e-11 Score=112.31 Aligned_cols=109 Identities=15% Similarity=0.143 Sum_probs=61.5
Q ss_pred ccccccchHHHHHHHh---cCC-CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEE
Q 012783 313 GLCAVQDESAGLVVAV---VDP-QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIR 388 (456)
Q Consensus 313 G~~~vQd~ss~lv~~~---l~~-~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~ 388 (456)
|.|..+..+..++..+ +.. .++.+|||+|||+|..+..++... +.++|+++|+++.+++.+++++...+. +++
T Consensus 6 ~~~~p~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~ 82 (215)
T 4dzr_A 6 DCLIPRPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGA--VVD 82 (215)
T ss_dssp GGGSCCHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC---------------------
T ss_pred CccCCCccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCC--ceE
Confidence 3444444444443333 333 678999999999999999999985 457999999999999999999998888 388
Q ss_pred EEeccccccccc---CCCCccEEEEcCCCCCCcccccCC
Q 012783 389 TIHADLRTFADN---STVKCDKVLLDAPCSGLGVLSKTC 424 (456)
Q Consensus 389 ~~~~Da~~~~~~---~~~~fD~VllDaPCSg~G~irr~p 424 (456)
++++|+...... ..++||.|++|+|+...+.+..-+
T Consensus 83 ~~~~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~ 121 (215)
T 4dzr_A 83 WAAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLE 121 (215)
T ss_dssp CCHHHHHHHHHHHHHTTCCBSEEEECCCCCC--------
T ss_pred EEEcchHhhhhhhhhccCcccEEEECCCCCCCccccccC
Confidence 999998763321 136899999999998877765433
No 59
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.15 E-value=2.2e-10 Score=109.51 Aligned_cols=85 Identities=9% Similarity=0.127 Sum_probs=70.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccc-ccccC----CCCccE
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FADNS----TVKCDK 407 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~-~~~~~----~~~fD~ 407 (456)
++.+|||+|||+|..+..++...+ .++|+++|+++.+++.+++|++..|+.++++++++|+.. +.... .++||.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 578999999999999999998753 479999999999999999999999998779999999765 22111 158999
Q ss_pred EEEcCCCCCCc
Q 012783 408 VLLDAPCSGLG 418 (456)
Q Consensus 408 VllDaPCSg~G 418 (456)
|++|||+...+
T Consensus 144 i~~npp~~~~~ 154 (254)
T 2h00_A 144 CMCNPPFFANQ 154 (254)
T ss_dssp EEECCCCC---
T ss_pred EEECCCCccCc
Confidence 99999998766
No 60
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.15 E-value=6.8e-11 Score=109.78 Aligned_cols=79 Identities=16% Similarity=0.228 Sum_probs=68.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEcC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 412 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllDa 412 (456)
++.+|||+|||+|..++.++.. +..+|+++|+++.+++.+++|++..|+.+ ++++++|+..+.....++||+|++|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~--~~~~V~~vD~s~~~l~~a~~~~~~~~~~~-v~~~~~D~~~~~~~~~~~fD~V~~~~ 130 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSR--YAAGATLIEMDRAVSQQLIKNLATLKAGN-ARVVNSNAMSFLAQKGTPHNIVFVDP 130 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCS-EEEECSCHHHHHSSCCCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHhc--CCCEEEEEECCHHHHHHHHHHHHHcCCCc-EEEEECCHHHHHhhcCCCCCEEEECC
Confidence 6889999999999999988775 23589999999999999999999999854 89999999875433346899999999
Q ss_pred CC
Q 012783 413 PC 414 (456)
Q Consensus 413 PC 414 (456)
|+
T Consensus 131 p~ 132 (202)
T 2fpo_A 131 PF 132 (202)
T ss_dssp SS
T ss_pred CC
Confidence 94
No 61
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.14 E-value=8.6e-11 Score=119.46 Aligned_cols=88 Identities=18% Similarity=0.342 Sum_probs=72.6
Q ss_pred HHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc-CC--
Q 012783 326 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-ST-- 402 (456)
Q Consensus 326 ~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~-~~-- 402 (456)
...++.. +++|||+|||+|++|+.+|.. .++|+++|+++.+++.+++|++.+|+++ ++++++|+..+... ..
T Consensus 207 ~~~~~~~-~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~~-v~~~~~d~~~~~~~~~~~~ 281 (369)
T 3bt7_A 207 LDVTKGS-KGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHIDN-VQIIRMAAEEFTQAMNGVR 281 (369)
T ss_dssp HHHTTTC-CSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCCS-EEEECCCSHHHHHHHSSCC
T ss_pred HHHhhcC-CCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEECCHHHHHHHHhhcc
Confidence 3344443 678999999999999998874 4689999999999999999999999976 89999999775321 11
Q ss_pred ------------CCccEEEEcCCCCCCc
Q 012783 403 ------------VKCDKVLLDAPCSGLG 418 (456)
Q Consensus 403 ------------~~fD~VllDaPCSg~G 418 (456)
..||.|++|||+.|..
T Consensus 282 ~~~~l~~~~~~~~~fD~Vv~dPPr~g~~ 309 (369)
T 3bt7_A 282 EFNRLQGIDLKSYQCETIFVDPPRSGLD 309 (369)
T ss_dssp CCTTGGGSCGGGCCEEEEEECCCTTCCC
T ss_pred ccccccccccccCCCCEEEECcCccccH
Confidence 2799999999999754
No 62
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.14 E-value=1.1e-10 Score=105.81 Aligned_cols=80 Identities=14% Similarity=0.171 Sum_probs=68.7
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
+.+|++|||+|||+|..+..+++. .++|+|+|+++.+++.++++++..|+.+ ++++++|...+.....++||.|++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~-v~~~~~~~~~l~~~~~~~fD~v~~ 95 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIEN-TELILDGHENLDHYVREPIRAAIF 95 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCC-EEEEESCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCc-EEEEeCcHHHHHhhccCCcCEEEE
Confidence 567999999999999999999986 5899999999999999999999999955 899998887754444578999999
Q ss_pred cCCC
Q 012783 411 DAPC 414 (456)
Q Consensus 411 DaPC 414 (456)
+.++
T Consensus 96 ~~~~ 99 (185)
T 3mti_A 96 NLGY 99 (185)
T ss_dssp EEC-
T ss_pred eCCC
Confidence 8644
No 63
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.14 E-value=9.4e-11 Score=108.72 Aligned_cols=80 Identities=18% Similarity=0.179 Sum_probs=68.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEEeccccccccc-CCCC-ccEEE
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN-SVIRTIHADLRTFADN-STVK-CDKVL 409 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~-~~V~~~~~Da~~~~~~-~~~~-fD~Vl 409 (456)
++.+|||+|||+|..+..++.. +.+.|+++|+|+.+++.+++|++..|+. .+++++++|+..+... ..++ ||+|+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 130 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR--QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVF 130 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEE
Confidence 6889999999999999987775 3468999999999999999999999983 2489999999876433 2467 99999
Q ss_pred EcCCC
Q 012783 410 LDAPC 414 (456)
Q Consensus 410 lDaPC 414 (456)
+|+|+
T Consensus 131 ~~~~~ 135 (201)
T 2ift_A 131 LDPPF 135 (201)
T ss_dssp ECCCS
T ss_pred ECCCC
Confidence 99995
No 64
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.12 E-value=1.7e-10 Score=119.80 Aligned_cols=91 Identities=22% Similarity=0.252 Sum_probs=77.3
Q ss_pred HHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc---cC
Q 012783 325 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---NS 401 (456)
Q Consensus 325 v~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---~~ 401 (456)
+...+.+.++++|||+|||+|..++.++.. .++|+|+|+++.+++.+++|++.+|+.+ +.++++|+..... ..
T Consensus 278 ~~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~-v~f~~~d~~~~l~~~~~~ 353 (433)
T 1uwv_A 278 ALEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQN-VTFYHENLEEDVTKQPWA 353 (433)
T ss_dssp HHHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEECCTTSCCSSSGGG
T ss_pred HHHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEECCHHHHhhhhhhh
Confidence 344567778899999999999999999976 5799999999999999999999999986 8999999977322 12
Q ss_pred CCCccEEEEcCCCCCCcc
Q 012783 402 TVKCDKVLLDAPCSGLGV 419 (456)
Q Consensus 402 ~~~fD~VllDaPCSg~G~ 419 (456)
.++||.|++|||++|.+.
T Consensus 354 ~~~fD~Vv~dPPr~g~~~ 371 (433)
T 1uwv_A 354 KNGFDKVLLDPARAGAAG 371 (433)
T ss_dssp TTCCSEEEECCCTTCCHH
T ss_pred cCCCCEEEECCCCccHHH
Confidence 357999999999998763
No 65
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.12 E-value=3.5e-10 Score=112.39 Aligned_cols=99 Identities=12% Similarity=0.155 Sum_probs=84.3
Q ss_pred cchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccc
Q 012783 318 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 397 (456)
Q Consensus 318 Qd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~ 397 (456)
|......+...+.+++|++|||+|||+|..+..+++..+..++|+++|+++.+++.++++++..|+.+ +.++.+|+...
T Consensus 60 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~d~~~~ 138 (317)
T 1dl5_A 60 QPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN-VIFVCGDGYYG 138 (317)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEECChhhc
Confidence 44555667778889999999999999999999999986545789999999999999999999999987 89999999874
Q ss_pred cccCCCCccEEEEcCCCCCCc
Q 012783 398 ADNSTVKCDKVLLDAPCSGLG 418 (456)
Q Consensus 398 ~~~~~~~fD~VllDaPCSg~G 418 (456)
... .++||+|+++.++...+
T Consensus 139 ~~~-~~~fD~Iv~~~~~~~~~ 158 (317)
T 1dl5_A 139 VPE-FSPYDVIFVTVGVDEVP 158 (317)
T ss_dssp CGG-GCCEEEEEECSBBSCCC
T ss_pred ccc-CCCeEEEEEcCCHHHHH
Confidence 432 36899999999887654
No 66
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.12 E-value=8.2e-11 Score=110.46 Aligned_cols=102 Identities=16% Similarity=0.102 Sum_probs=82.4
Q ss_pred ccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEec
Q 012783 313 GLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA 392 (456)
Q Consensus 313 G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~ 392 (456)
+.+.+......++..++...++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++..|+.++++++++
T Consensus 49 ~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~ 128 (229)
T 2avd_A 49 GDSMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK 128 (229)
T ss_dssp GGGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred CCCccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEc
Confidence 33445555555666666667789999999999999999999876678999999999999999999999999767999999
Q ss_pred ccccccccC--C---CCccEEEEcCCC
Q 012783 393 DLRTFADNS--T---VKCDKVLLDAPC 414 (456)
Q Consensus 393 Da~~~~~~~--~---~~fD~VllDaPC 414 (456)
|+....... . ++||.|++|+|.
T Consensus 129 d~~~~~~~~~~~~~~~~~D~v~~d~~~ 155 (229)
T 2avd_A 129 PALETLDELLAAGEAGTFDVAVVDADK 155 (229)
T ss_dssp CHHHHHHHHHHTTCTTCEEEEEECSCS
T ss_pred CHHHHHHHHHhcCCCCCccEEEECCCH
Confidence 986542211 1 589999999984
No 67
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.11 E-value=2.8e-10 Score=105.04 Aligned_cols=79 Identities=18% Similarity=0.278 Sum_probs=69.3
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEE
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vl 409 (456)
.+.++.+|||+|||+|..+..++.. +.++|+++|+++.+++.+++|++..|+ + +.++++|+..++ ..||.|+
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~-~-~~~~~~d~~~~~----~~~D~v~ 117 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL--GAKEVICVEVDKEAVDVLIENLGEFKG-K-FKVFIGDVSEFN----SRVDIVI 117 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHTGGGTT-S-EEEEESCGGGCC----CCCSEEE
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCC-C-EEEEECchHHcC----CCCCEEE
Confidence 4667899999999999999999886 345899999999999999999999888 4 899999998753 4899999
Q ss_pred EcCCCCC
Q 012783 410 LDAPCSG 416 (456)
Q Consensus 410 lDaPCSg 416 (456)
+|+|+..
T Consensus 118 ~~~p~~~ 124 (207)
T 1wy7_A 118 MNPPFGS 124 (207)
T ss_dssp ECCCCSS
T ss_pred EcCCCcc
Confidence 9999753
No 68
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.10 E-value=2.8e-10 Score=115.87 Aligned_cols=95 Identities=17% Similarity=0.159 Sum_probs=79.1
Q ss_pred cchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccc
Q 012783 318 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 397 (456)
Q Consensus 318 Qd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~ 397 (456)
+..-+..++..+ ..++.+|||+|||+|+.++.++... ..++|+++|+++.+++.+++|++..|+.+.++++++|+..+
T Consensus 203 ~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~ 280 (373)
T 3tm4_A 203 KASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL 280 (373)
T ss_dssp CHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG
T ss_pred cHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 333344445555 7889999999999999999999863 34689999999999999999999999966699999999987
Q ss_pred cccCCCCccEEEEcCCCC
Q 012783 398 ADNSTVKCDKVLLDAPCS 415 (456)
Q Consensus 398 ~~~~~~~fD~VllDaPCS 415 (456)
+.. .+.||.|++|||..
T Consensus 281 ~~~-~~~fD~Ii~npPyg 297 (373)
T 3tm4_A 281 SQY-VDSVDFAISNLPYG 297 (373)
T ss_dssp GGT-CSCEEEEEEECCCC
T ss_pred Ccc-cCCcCEEEECCCCC
Confidence 643 36899999999974
No 69
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.10 E-value=1.4e-10 Score=114.68 Aligned_cols=97 Identities=11% Similarity=0.089 Sum_probs=79.9
Q ss_pred ccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccc
Q 012783 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (456)
Q Consensus 315 ~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da 394 (456)
|.+++.....++..+++.++++|||+|||+|..|..+++. .++|+|+|+++.+++.++++++..++++ ++++++|+
T Consensus 24 fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~~-v~~~~~D~ 99 (299)
T 2h1r_A 24 LLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNN-LEVYEGDA 99 (299)
T ss_dssp EECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCC-EEC----C
T ss_pred eecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEECch
Confidence 4556667778888889999999999999999999999875 4699999999999999999999888865 89999999
Q ss_pred ccccccCCCCccEEEEcCCCCCCc
Q 012783 395 RTFADNSTVKCDKVLLDAPCSGLG 418 (456)
Q Consensus 395 ~~~~~~~~~~fD~VllDaPCSg~G 418 (456)
..++. ..||.|++|+|+..+.
T Consensus 100 ~~~~~---~~~D~Vv~n~py~~~~ 120 (299)
T 2h1r_A 100 IKTVF---PKFDVCTANIPYKISS 120 (299)
T ss_dssp CSSCC---CCCSEEEEECCGGGHH
T ss_pred hhCCc---ccCCEEEEcCCccccc
Confidence 87643 4799999999998654
No 70
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.09 E-value=7e-10 Score=105.70 Aligned_cols=100 Identities=22% Similarity=0.307 Sum_probs=82.2
Q ss_pred cccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc-CCCceEEEEec
Q 012783 314 LCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-QVNSVIRTIHA 392 (456)
Q Consensus 314 ~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~-g~~~~V~~~~~ 392 (456)
...+.......++..+++.++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++.. |.. ++.++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~-~v~~~~~ 155 (258)
T 2pwy_A 77 ATPTYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVE-NVRFHLG 155 (258)
T ss_dssp SCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCC-CEEEEES
T ss_pred cccccchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCC-CEEEEEC
Confidence 33344444456777788899999999999999999999998776789999999999999999999988 854 4899999
Q ss_pred ccccccccCCCCccEEEEcCCCC
Q 012783 393 DLRTFADNSTVKCDKVLLDAPCS 415 (456)
Q Consensus 393 Da~~~~~~~~~~fD~VllDaPCS 415 (456)
|+...+. ..+.||.|++|+|+.
T Consensus 156 d~~~~~~-~~~~~D~v~~~~~~~ 177 (258)
T 2pwy_A 156 KLEEAEL-EEAAYDGVALDLMEP 177 (258)
T ss_dssp CGGGCCC-CTTCEEEEEEESSCG
T ss_pred chhhcCC-CCCCcCEEEECCcCH
Confidence 9987632 236899999998754
No 71
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.08 E-value=4.4e-10 Score=100.71 Aligned_cols=102 Identities=15% Similarity=0.194 Sum_probs=79.0
Q ss_pred cccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEe
Q 012783 312 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH 391 (456)
Q Consensus 312 ~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~ 391 (456)
+|.+..++.. ..+...+.+.++.+|||+|||+|..+..++... +.++|+++|+++.+++.++++++..|+..++ +++
T Consensus 5 ~g~~t~~~~~-~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~ 81 (178)
T 3hm2_A 5 DGQLTKQHVR-ALAISALAPKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQ 81 (178)
T ss_dssp -CCSHHHHHH-HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEE
T ss_pred CCcccHHHHH-HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEe
Confidence 4555555444 444566688899999999999999999999875 4689999999999999999999999998457 888
Q ss_pred cccccccccCCCCccEEEEcCCCCC
Q 012783 392 ADLRTFADNSTVKCDKVLLDAPCSG 416 (456)
Q Consensus 392 ~Da~~~~~~~~~~fD~VllDaPCSg 416 (456)
+|+........+.||.|+++.+...
T Consensus 82 ~d~~~~~~~~~~~~D~i~~~~~~~~ 106 (178)
T 3hm2_A 82 QGAPRAFDDVPDNPDVIFIGGGLTA 106 (178)
T ss_dssp CCTTGGGGGCCSCCSEEEECC-TTC
T ss_pred cchHhhhhccCCCCCEEEECCcccH
Confidence 8885433322368999998766543
No 72
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.08 E-value=1.3e-10 Score=110.18 Aligned_cols=99 Identities=16% Similarity=0.131 Sum_probs=81.0
Q ss_pred cccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccc
Q 012783 316 AVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLR 395 (456)
Q Consensus 316 ~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~ 395 (456)
.++.....++..++...++.+|||+|||+|..+..++..+++.++|+++|+++.+++.+++++++.|+.++|+++.+|+.
T Consensus 55 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~ 134 (232)
T 3cbg_A 55 QISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPAL 134 (232)
T ss_dssp SCCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 44555556666555556788999999999999999999876678999999999999999999999999877999999986
Q ss_pred cccccC---C--CCccEEEEcCCC
Q 012783 396 TFADNS---T--VKCDKVLLDAPC 414 (456)
Q Consensus 396 ~~~~~~---~--~~fD~VllDaPC 414 (456)
...... . ++||.|++|+++
T Consensus 135 ~~l~~l~~~~~~~~fD~V~~d~~~ 158 (232)
T 3cbg_A 135 ATLEQLTQGKPLPEFDLIFIDADK 158 (232)
T ss_dssp HHHHHHHTSSSCCCEEEEEECSCG
T ss_pred HHHHHHHhcCCCCCcCEEEECCCH
Confidence 532211 1 689999999874
No 73
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.08 E-value=7.1e-10 Score=107.33 Aligned_cols=100 Identities=18% Similarity=0.181 Sum_probs=82.6
Q ss_pred ccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc-C-CCceEEEE
Q 012783 313 GLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-Q-VNSVIRTI 390 (456)
Q Consensus 313 G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~-g-~~~~V~~~ 390 (456)
+...++......++..+++.++.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++.. | +..++.++
T Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~ 158 (280)
T 1i9g_A 79 GPQVIYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLV 158 (280)
T ss_dssp CSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEE
T ss_pred cceeecHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 444445555667777888999999999999999999999998777789999999999999999999988 6 33348999
Q ss_pred ecccccccccCCCCccEEEEcCC
Q 012783 391 HADLRTFADNSTVKCDKVLLDAP 413 (456)
Q Consensus 391 ~~Da~~~~~~~~~~fD~VllDaP 413 (456)
++|+...+. ..+.||.|++|.|
T Consensus 159 ~~d~~~~~~-~~~~~D~v~~~~~ 180 (280)
T 1i9g_A 159 VSDLADSEL-PDGSVDRAVLDML 180 (280)
T ss_dssp CSCGGGCCC-CTTCEEEEEEESS
T ss_pred ECchHhcCC-CCCceeEEEECCc
Confidence 999987642 2368999999877
No 74
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.06 E-value=6.1e-10 Score=111.31 Aligned_cols=104 Identities=18% Similarity=0.382 Sum_probs=80.7
Q ss_pred cccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcC---------
Q 012783 312 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ--------- 382 (456)
Q Consensus 312 ~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g--------- 382 (456)
.|.-..+...+..++..+++.+|.+|||+|||+|..+..++..+++.++|+++|+++.+++.+++|++.+|
T Consensus 84 ~~~~~~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~ 163 (336)
T 2b25_A 84 RGTAITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVE 163 (336)
T ss_dssp CSSCCCCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSS
T ss_pred CCCcccCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhccccccccc
Confidence 34444455546667777889999999999999999999999987667899999999999999999998754
Q ss_pred -CCceEEEEecccccccc-cCCCCccEEEEcCCCC
Q 012783 383 -VNSVIRTIHADLRTFAD-NSTVKCDKVLLDAPCS 415 (456)
Q Consensus 383 -~~~~V~~~~~Da~~~~~-~~~~~fD~VllDaPCS 415 (456)
...++.++.+|+..... ...+.||.|++|.|+.
T Consensus 164 ~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~ 198 (336)
T 2b25_A 164 EWPDNVDFIHKDISGATEDIKSLTFDAVALDMLNP 198 (336)
T ss_dssp CCCCCEEEEESCTTCCC-------EEEEEECSSST
T ss_pred ccCCceEEEECChHHcccccCCCCeeEEEECCCCH
Confidence 22348999999987532 2235799999998754
No 75
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.06 E-value=1.1e-09 Score=99.05 Aligned_cols=91 Identities=22% Similarity=0.317 Sum_probs=78.9
Q ss_pred hHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEEeccccccc
Q 012783 320 ESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS-VIRTIHADLRTFA 398 (456)
Q Consensus 320 ~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~-~V~~~~~Da~~~~ 398 (456)
..+..+...+...++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++...++.+ ++.++++|+....
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 115 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV 115 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc
Confidence 56777788888889999999999999999999886 5799999999999999999999999876 5899999987643
Q ss_pred ccCCCCccEEEEcCCCC
Q 012783 399 DNSTVKCDKVLLDAPCS 415 (456)
Q Consensus 399 ~~~~~~fD~VllDaPCS 415 (456)
. .++||.|++++|..
T Consensus 116 ~--~~~~D~v~~~~~~~ 130 (194)
T 1dus_A 116 K--DRKYNKIITNPPIR 130 (194)
T ss_dssp T--TSCEEEEEECCCST
T ss_pred c--cCCceEEEECCCcc
Confidence 2 46899999998864
No 76
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.05 E-value=4.5e-10 Score=101.52 Aligned_cols=87 Identities=20% Similarity=0.285 Sum_probs=71.9
Q ss_pred HHhcC-CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---C
Q 012783 326 VAVVD-PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---S 401 (456)
Q Consensus 326 ~~~l~-~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---~ 401 (456)
...+. ..++.+|||+|||+|..+..+++. +..+|+++|+++.+++.+++|++..++.++++++++|+..+... .
T Consensus 36 ~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 113 (187)
T 2fhp_A 36 FNMIGPYFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEE 113 (187)
T ss_dssp HHHHCSCCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHT
T ss_pred HHHHHhhcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhc
Confidence 33443 457899999999999999998874 45799999999999999999999999866699999999774321 1
Q ss_pred CCCccEEEEcCCC
Q 012783 402 TVKCDKVLLDAPC 414 (456)
Q Consensus 402 ~~~fD~VllDaPC 414 (456)
.++||.|++|+|.
T Consensus 114 ~~~fD~i~~~~~~ 126 (187)
T 2fhp_A 114 KLQFDLVLLDPPY 126 (187)
T ss_dssp TCCEEEEEECCCG
T ss_pred CCCCCEEEECCCC
Confidence 3689999999994
No 77
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.05 E-value=1.2e-09 Score=102.71 Aligned_cols=97 Identities=11% Similarity=0.147 Sum_probs=77.7
Q ss_pred cchHHHHHHHhc--CCCCCCeEEEEcCCCchHHHHHHHHcCC-----CceEEEEeCCHHHHHHHHHHHHHcC-----CCc
Q 012783 318 QDESAGLVVAVV--DPQPGQSIVDCCAAPGGKTLYMASCLSG-----QGLVYAIDINKGRLRILNETAKLHQ-----VNS 385 (456)
Q Consensus 318 Qd~ss~lv~~~l--~~~~g~~VLDlcAGpGgkt~~la~~~~~-----~g~V~AvDis~~rl~~l~~n~~r~g-----~~~ 385 (456)
|......+...+ .+.++.+|||+|||+|..+..+++.++. .++|+++|+++.+++.++++++..+ ..+
T Consensus 67 ~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 146 (227)
T 1r18_A 67 APHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQ 146 (227)
T ss_dssp CHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCc
Confidence 444445556666 4788999999999999999999997643 3699999999999999999998877 555
Q ss_pred eEEEEecccccccccCCCCccEEEEcCCCCC
Q 012783 386 VIRTIHADLRTFADNSTVKCDKVLLDAPCSG 416 (456)
Q Consensus 386 ~V~~~~~Da~~~~~~~~~~fD~VllDaPCSg 416 (456)
+.++++|+...... .++||+|++++++..
T Consensus 147 -v~~~~~d~~~~~~~-~~~fD~I~~~~~~~~ 175 (227)
T 1r18_A 147 -LLIVEGDGRKGYPP-NAPYNAIHVGAAAPD 175 (227)
T ss_dssp -EEEEESCGGGCCGG-GCSEEEEEECSCBSS
T ss_pred -eEEEECCcccCCCc-CCCccEEEECCchHH
Confidence 89999998763221 258999999998753
No 78
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.05 E-value=7.2e-10 Score=109.11 Aligned_cols=81 Identities=15% Similarity=0.064 Sum_probs=69.2
Q ss_pred hcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccE
Q 012783 328 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDK 407 (456)
Q Consensus 328 ~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~ 407 (456)
++.+++|++|||+|||+|+.|..++... ..++|+++|+++.+++.+++++++.|+ ++|+++++|+..++ .++||+
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~---d~~FDv 191 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID---GLEFDV 191 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG---GCCCSE
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC---CCCcCE
Confidence 5678999999999999999886554443 358999999999999999999999999 56999999998875 368999
Q ss_pred EEEcCC
Q 012783 408 VLLDAP 413 (456)
Q Consensus 408 VllDaP 413 (456)
|++++-
T Consensus 192 V~~~a~ 197 (298)
T 3fpf_A 192 LMVAAL 197 (298)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 998653
No 79
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.04 E-value=9.5e-10 Score=103.09 Aligned_cols=92 Identities=18% Similarity=0.254 Sum_probs=76.3
Q ss_pred HHHHHhc--CCCCCCeEEEEcCCCchHHHHHHHHcC----CCceEEEEeCCHHHHHHHHHHHHHcC-----CCceEEEEe
Q 012783 323 GLVVAVV--DPQPGQSIVDCCAAPGGKTLYMASCLS----GQGLVYAIDINKGRLRILNETAKLHQ-----VNSVIRTIH 391 (456)
Q Consensus 323 ~lv~~~l--~~~~g~~VLDlcAGpGgkt~~la~~~~----~~g~V~AvDis~~rl~~l~~n~~r~g-----~~~~V~~~~ 391 (456)
..+...+ .+.++.+|||+|||+|..+..+++..+ +.++|+++|+++.+++.++++++..+ ..+ +.++.
T Consensus 68 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~-v~~~~ 146 (227)
T 2pbf_A 68 ALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDN-FKIIH 146 (227)
T ss_dssp HHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTT-EEEEE
T ss_pred HHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCC-EEEEE
Confidence 3445555 578899999999999999999999875 56799999999999999999999988 444 89999
Q ss_pred ccccccc----ccCCCCccEEEEcCCCCC
Q 012783 392 ADLRTFA----DNSTVKCDKVLLDAPCSG 416 (456)
Q Consensus 392 ~Da~~~~----~~~~~~fD~VllDaPCSg 416 (456)
+|+.... .. .++||+|++++++..
T Consensus 147 ~d~~~~~~~~~~~-~~~fD~I~~~~~~~~ 174 (227)
T 2pbf_A 147 KNIYQVNEEEKKE-LGLFDAIHVGASASE 174 (227)
T ss_dssp CCGGGCCHHHHHH-HCCEEEEEECSBBSS
T ss_pred CChHhcccccCcc-CCCcCEEEECCchHH
Confidence 9987643 22 368999999988863
No 80
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.04 E-value=1.2e-09 Score=97.96 Aligned_cols=93 Identities=17% Similarity=0.319 Sum_probs=77.9
Q ss_pred ccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccc
Q 012783 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (456)
Q Consensus 315 ~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da 394 (456)
...++.-...+...+...++.+|||+|||+|..+..++. +..+|+++|+++.+++.++++++..|+++ +.++++|+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-~~~~~~d~ 92 (183)
T 2yxd_A 17 PITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIKN-CQIIKGRA 92 (183)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCCS-EEEEESCH
T ss_pred CcCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEECCc
Confidence 334455555667777888899999999999999999987 46899999999999999999999999865 89999998
Q ss_pred ccccccCCCCccEEEEcCC
Q 012783 395 RTFADNSTVKCDKVLLDAP 413 (456)
Q Consensus 395 ~~~~~~~~~~fD~VllDaP 413 (456)
..... .+.||.|+++.|
T Consensus 93 ~~~~~--~~~~D~i~~~~~ 109 (183)
T 2yxd_A 93 EDVLD--KLEFNKAFIGGT 109 (183)
T ss_dssp HHHGG--GCCCSEEEECSC
T ss_pred ccccc--CCCCcEEEECCc
Confidence 76322 258999999988
No 81
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.04 E-value=1.4e-09 Score=100.93 Aligned_cols=101 Identities=16% Similarity=0.171 Sum_probs=82.0
Q ss_pred ccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEec
Q 012783 313 GLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA 392 (456)
Q Consensus 313 G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~ 392 (456)
|....+......+...+.+.++.+|||+|||+|..+..++...++.++|+++|+++.+++.+++++...|+.+ +.++.+
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~ 135 (215)
T 2yxe_A 57 GQTISAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDN-VIVIVG 135 (215)
T ss_dssp TEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTT-EEEEES
T ss_pred CcEeCcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEEC
Confidence 3334444455566777788899999999999999999999987555899999999999999999999999887 899999
Q ss_pred ccccccccCCCCccEEEEcCCCC
Q 012783 393 DLRTFADNSTVKCDKVLLDAPCS 415 (456)
Q Consensus 393 Da~~~~~~~~~~fD~VllDaPCS 415 (456)
|+...... .++||+|+++.++.
T Consensus 136 d~~~~~~~-~~~fD~v~~~~~~~ 157 (215)
T 2yxe_A 136 DGTLGYEP-LAPYDRIYTTAAGP 157 (215)
T ss_dssp CGGGCCGG-GCCEEEEEESSBBS
T ss_pred CcccCCCC-CCCeeEEEECCchH
Confidence 98543221 35899999987664
No 82
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.04 E-value=5.7e-10 Score=111.97 Aligned_cols=81 Identities=26% Similarity=0.402 Sum_probs=72.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEc
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllD 411 (456)
.+|.+|||+|||+|+.++. +. +.++|+|+|+|+.+++.+++|++.+|+.++++++++|+..+. +.||.|++|
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----~~fD~Vi~d 265 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----VKGNRVIMN 265 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----CCEEEEEEC
T ss_pred CCCCEEEEccCccCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----CCCcEEEEC
Confidence 5789999999999999999 76 367999999999999999999999999656999999998765 689999999
Q ss_pred CCCCCCccc
Q 012783 412 APCSGLGVL 420 (456)
Q Consensus 412 aPCSg~G~i 420 (456)
+|.++...+
T Consensus 266 pP~~~~~~l 274 (336)
T 2yx1_A 266 LPKFAHKFI 274 (336)
T ss_dssp CTTTGGGGH
T ss_pred CcHhHHHHH
Confidence 999876544
No 83
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.03 E-value=1.2e-09 Score=103.29 Aligned_cols=102 Identities=13% Similarity=0.199 Sum_probs=83.2
Q ss_pred ccccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEE
Q 012783 311 KEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTI 390 (456)
Q Consensus 311 ~~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~ 390 (456)
..|....+......+...+.+.++.+|||+|||+|..+..+++..+ ++|+++|+++.+++.++++++..|+.+ +.++
T Consensus 69 ~~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~ 145 (235)
T 1jg1_A 69 PAGQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKN-VHVI 145 (235)
T ss_dssp STTCEECCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCS-EEEE
T ss_pred CCCceeccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCC-cEEE
Confidence 3455556666666777788889999999999999999999999864 799999999999999999999999987 8999
Q ss_pred ecccccccccCCCCccEEEEcCCCCC
Q 012783 391 HADLRTFADNSTVKCDKVLLDAPCSG 416 (456)
Q Consensus 391 ~~Da~~~~~~~~~~fD~VllDaPCSg 416 (456)
.+|+.... ....+||+|+++.++..
T Consensus 146 ~~d~~~~~-~~~~~fD~Ii~~~~~~~ 170 (235)
T 1jg1_A 146 LGDGSKGF-PPKAPYDVIIVTAGAPK 170 (235)
T ss_dssp ESCGGGCC-GGGCCEEEEEECSBBSS
T ss_pred ECCcccCC-CCCCCccEEEECCcHHH
Confidence 99973211 12246999999877643
No 84
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.03 E-value=1.1e-10 Score=113.05 Aligned_cols=92 Identities=17% Similarity=0.124 Sum_probs=74.9
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCH-------HHHHHHHHHHHHcCCCceEEEEeccc
Q 012783 322 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINK-------GRLRILNETAKLHQVNSVIRTIHADL 394 (456)
Q Consensus 322 s~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~-------~rl~~l~~n~~r~g~~~~V~~~~~Da 394 (456)
..++..++.+.++.+|||+|||+|..++.+|.. .++|+++|+++ .+++.+++|++..|+.++|+++++|+
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~ 148 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNA 148 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCH
T ss_pred hHHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCH
Confidence 345566666677899999999999999999985 46899999999 99999999999888877799999999
Q ss_pred ccccccC-C--CCccEEEEcCCCCC
Q 012783 395 RTFADNS-T--VKCDKVLLDAPCSG 416 (456)
Q Consensus 395 ~~~~~~~-~--~~fD~VllDaPCSg 416 (456)
..+.... . .+||.|++|||...
T Consensus 149 ~~~l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 149 AEQMPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHHHHHHCCCSEEEECCCC--
T ss_pred HHHHHhhhccCCCccEEEECCCCCC
Confidence 8753321 1 58999999998754
No 85
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.03 E-value=4.3e-10 Score=106.72 Aligned_cols=98 Identities=15% Similarity=0.147 Sum_probs=81.4
Q ss_pred cccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccc
Q 012783 316 AVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLR 395 (456)
Q Consensus 316 ~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~ 395 (456)
.++.....++..++...++.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++..|+.+++.++.+|+.
T Consensus 43 ~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 122 (239)
T 2hnk_A 43 QISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSAL 122 (239)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred ccCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHH
Confidence 45556666666666677889999999999999999999876578999999999999999999999999877999999987
Q ss_pred cccccC---------------C-CCccEEEEcCC
Q 012783 396 TFADNS---------------T-VKCDKVLLDAP 413 (456)
Q Consensus 396 ~~~~~~---------------~-~~fD~VllDaP 413 (456)
...... . ++||.|++|..
T Consensus 123 ~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~ 156 (239)
T 2hnk_A 123 ETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDAD 156 (239)
T ss_dssp HHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSC
T ss_pred HHHHHHHhhcccccccccccCCCCCcCEEEEeCC
Confidence 632211 1 68999999964
No 86
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.03 E-value=7.9e-10 Score=114.52 Aligned_cols=80 Identities=23% Similarity=0.273 Sum_probs=71.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
+.++++|||+|||+|..++.+|.. ..+|+++|+++.+++.+++|++.+|+. ++++++|+..+.. ..||.|++
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~---~~fD~Vv~ 359 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSV---KGFDTVIV 359 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCC---TTCSEEEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCc---cCCCEEEE
Confidence 567899999999999999999985 468999999999999999999999986 8999999987643 27999999
Q ss_pred cCCCCCCc
Q 012783 411 DAPCSGLG 418 (456)
Q Consensus 411 DaPCSg~G 418 (456)
|||++|..
T Consensus 360 dPPr~g~~ 367 (425)
T 2jjq_A 360 DPPRAGLH 367 (425)
T ss_dssp CCCTTCSC
T ss_pred cCCccchH
Confidence 99998765
No 87
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.02 E-value=1.4e-09 Score=110.80 Aligned_cols=101 Identities=13% Similarity=0.048 Sum_probs=83.7
Q ss_pred ccccc--cchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc--eEE
Q 012783 313 GLCAV--QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS--VIR 388 (456)
Q Consensus 313 G~~~v--Qd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~--~V~ 388 (456)
|.|.- .|..+.++...+...++.+|||+|||+|..+..++... +..+|+++|+++.+++.+++|++.+|+.+ .+.
T Consensus 200 g~Fs~~~~d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~ 278 (375)
T 4dcm_A 200 NVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCE 278 (375)
T ss_dssp TCTTCSSCCHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEE
T ss_pred CcccCCcccHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEE
Confidence 54544 56677788888888888999999999999999999974 46799999999999999999999998764 378
Q ss_pred EEecccccccccCCCCccEEEEcCCCCC
Q 012783 389 TIHADLRTFADNSTVKCDKVLLDAPCSG 416 (456)
Q Consensus 389 ~~~~Da~~~~~~~~~~fD~VllDaPCSg 416 (456)
++.+|+.... ..++||.|++|+|...
T Consensus 279 ~~~~D~~~~~--~~~~fD~Ii~nppfh~ 304 (375)
T 4dcm_A 279 FMINNALSGV--EPFRFNAVLCNPPFHQ 304 (375)
T ss_dssp EEECSTTTTC--CTTCEEEEEECCCC--
T ss_pred EEechhhccC--CCCCeeEEEECCCccc
Confidence 8999987632 2368999999999753
No 88
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.00 E-value=1.5e-09 Score=101.50 Aligned_cols=80 Identities=19% Similarity=0.231 Sum_probs=65.0
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc--cCCCCcc
Q 012783 329 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD--NSTVKCD 406 (456)
Q Consensus 329 l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~--~~~~~fD 406 (456)
+.+.+|++|||+|||+|..+.+++...+ .++|+|+|+|+.+++.+.+++++. .| +.++.+|+..... ...++||
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~--~~-v~~~~~d~~~~~~~~~~~~~fD 128 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER--NN-IIPLLFDASKPWKYSGIVEKVD 128 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC--SS-EEEECSCTTCGGGTTTTCCCEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC--CC-eEEEEcCCCCchhhccccccee
Confidence 4567899999999999999999999876 689999999999998887777654 34 7888999876421 1236899
Q ss_pred EEEEcC
Q 012783 407 KVLLDA 412 (456)
Q Consensus 407 ~VllDa 412 (456)
.|++|.
T Consensus 129 ~V~~~~ 134 (210)
T 1nt2_A 129 LIYQDI 134 (210)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 999984
No 89
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.00 E-value=7.4e-10 Score=106.19 Aligned_cols=78 Identities=8% Similarity=0.091 Sum_probs=67.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
+.+|++|||+|||+|..++.++.. ++.++|+|+|+++..++.+++|++++|+.++|++.++|+...... ..+||.|++
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~-~~~~D~Ivi 96 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK-KDAIDTIVI 96 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc-cccccEEEE
Confidence 457899999999999999999986 445789999999999999999999999998899999998765432 136999887
No 90
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.99 E-value=9.3e-10 Score=105.80 Aligned_cols=80 Identities=10% Similarity=0.104 Sum_probs=70.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc--CCCCccEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--STVKCDKV 408 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~--~~~~fD~V 408 (456)
..++.+|||+|||+|..++.+|... +.++|+++|+++.+++.+++|++++|+.| |+++++|+..++.. ..++||.|
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~-v~~~~~d~~~~~~~~~~~~~fD~I 155 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKG-ARALWGRAEVLAREAGHREAYARA 155 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEECCHHHHTTSTTTTTCEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCc-eEEEECcHHHhhcccccCCCceEE
Confidence 4678999999999999999999875 46899999999999999999999999987 99999999887542 23689999
Q ss_pred EEcC
Q 012783 409 LLDA 412 (456)
Q Consensus 409 llDa 412 (456)
++.+
T Consensus 156 ~s~a 159 (249)
T 3g89_A 156 VARA 159 (249)
T ss_dssp EEES
T ss_pred EECC
Confidence 9864
No 91
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.99 E-value=2.2e-09 Score=102.06 Aligned_cols=85 Identities=20% Similarity=0.154 Sum_probs=74.2
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccC
Q 012783 322 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS 401 (456)
Q Consensus 322 s~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~ 401 (456)
...+...+.+.++.+|||+|||+|..+..++... ..+|+++|+++.+++.++++++..|+.+++.++++|+..++.
T Consensus 25 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-- 100 (256)
T 1nkv_A 25 YATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-- 100 (256)
T ss_dssp HHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC--
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc--
Confidence 3455666788899999999999999999999886 468999999999999999999999987669999999987754
Q ss_pred CCCccEEEE
Q 012783 402 TVKCDKVLL 410 (456)
Q Consensus 402 ~~~fD~Vll 410 (456)
.++||+|++
T Consensus 101 ~~~fD~V~~ 109 (256)
T 1nkv_A 101 NEKCDVAAC 109 (256)
T ss_dssp SSCEEEEEE
T ss_pred CCCCCEEEE
Confidence 478999997
No 92
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.99 E-value=1.2e-09 Score=105.79 Aligned_cols=89 Identities=19% Similarity=0.211 Sum_probs=73.5
Q ss_pred ccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccc
Q 012783 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLR 395 (456)
Q Consensus 317 vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~ 395 (456)
+++....++... ++||.+|||+|||+|..+..+++.... ..+|+|+|+|+.+++.++++++..+...+|+++++|+.
T Consensus 56 ~~~~i~~l~~~~--~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~ 133 (261)
T 4gek_A 56 IISMIGMLAERF--VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIR 133 (261)
T ss_dssp HHHHHHHHHHHH--CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTT
T ss_pred HHHHHHHHHHHh--CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccc
Confidence 344444444444 467999999999999999999998653 45899999999999999999999998877999999998
Q ss_pred cccccCCCCccEEEE
Q 012783 396 TFADNSTVKCDKVLL 410 (456)
Q Consensus 396 ~~~~~~~~~fD~Vll 410 (456)
.++. +.||.|++
T Consensus 134 ~~~~---~~~d~v~~ 145 (261)
T 4gek_A 134 DIAI---ENASMVVL 145 (261)
T ss_dssp TCCC---CSEEEEEE
T ss_pred cccc---ccccccee
Confidence 8753 46999987
No 93
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.99 E-value=1.6e-09 Score=102.62 Aligned_cols=91 Identities=14% Similarity=0.198 Sum_probs=79.8
Q ss_pred ccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccc
Q 012783 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 396 (456)
Q Consensus 317 vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~ 396 (456)
-|++++..++..+++.++.+|||+|||+|..+..++... ..|+++|+++.+++.++++++..|+.+ +.++.+|+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~ 80 (239)
T 1xxl_A 5 HHHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVEN-VRFQQGTAES 80 (239)
T ss_dssp -CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCS-EEEEECBTTB
T ss_pred ccCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEeccccc
Confidence 478889999999999999999999999999999998763 589999999999999999999999876 8999999987
Q ss_pred ccccCCCCccEEEEcC
Q 012783 397 FADNSTVKCDKVLLDA 412 (456)
Q Consensus 397 ~~~~~~~~fD~VllDa 412 (456)
++. ..++||.|++..
T Consensus 81 ~~~-~~~~fD~v~~~~ 95 (239)
T 1xxl_A 81 LPF-PDDSFDIITCRY 95 (239)
T ss_dssp CCS-CTTCEEEEEEES
T ss_pred CCC-CCCcEEEEEECC
Confidence 653 346899999863
No 94
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.99 E-value=1.1e-09 Score=104.16 Aligned_cols=78 Identities=12% Similarity=0.107 Sum_probs=67.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
+.+|++|||+|||+|..++.++.. ++.++|+|+|+++..++.+++|++++|+.++|++.++|+...... ..+||.|++
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~-~~~~D~Ivi 96 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE-ADNIDTITI 96 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc-ccccCEEEE
Confidence 457899999999999999999886 446789999999999999999999999998899999999775432 137999886
No 95
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.98 E-value=1.5e-09 Score=103.18 Aligned_cols=81 Identities=22% Similarity=0.233 Sum_probs=69.7
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc--CCCCccE
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--STVKCDK 407 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~--~~~~fD~ 407 (456)
.+.++.+|||+|||+|..+..++... +.++|+++|+++.+++.++++++++|+.+ |+++++|+..++.. ..++||.
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~~~~fD~ 144 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLEN-TTFCHDRAETFGQRKDVRESYDI 144 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEESCHHHHTTCTTTTTCEEE
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCC-EEEEeccHHHhcccccccCCccE
Confidence 34578999999999999999999864 46899999999999999999999999987 99999999876532 2368999
Q ss_pred EEEcC
Q 012783 408 VLLDA 412 (456)
Q Consensus 408 VllDa 412 (456)
|++++
T Consensus 145 V~~~~ 149 (240)
T 1xdz_A 145 VTARA 149 (240)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99976
No 96
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.98 E-value=1.5e-09 Score=106.50 Aligned_cols=97 Identities=11% Similarity=0.090 Sum_probs=81.8
Q ss_pred ccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccc
Q 012783 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (456)
Q Consensus 315 ~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da 394 (456)
|..+......++..+.+.++++|||+|||+|..|..+++. .++|+|+|+++.+++.+++++...+...+++++++|+
T Consensus 10 fl~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~ 86 (285)
T 1zq9_A 10 ILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDV 86 (285)
T ss_dssp EECCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCT
T ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcce
Confidence 3345556667778888889999999999999999999987 3689999999999999999998777744589999999
Q ss_pred ccccccCCCCccEEEEcCCCCCC
Q 012783 395 RTFADNSTVKCDKVLLDAPCSGL 417 (456)
Q Consensus 395 ~~~~~~~~~~fD~VllDaPCSg~ 417 (456)
..++. ..||.|+++.|+..+
T Consensus 87 ~~~~~---~~fD~vv~nlpy~~~ 106 (285)
T 1zq9_A 87 LKTDL---PFFDTCVANLPYQIS 106 (285)
T ss_dssp TTSCC---CCCSEEEEECCGGGH
T ss_pred ecccc---hhhcEEEEecCcccc
Confidence 87532 379999999999865
No 97
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.98 E-value=4e-10 Score=115.84 Aligned_cols=81 Identities=15% Similarity=0.132 Sum_probs=68.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--CCCceEEEEeccccccccc-CCCCccEEE
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QVNSVIRTIHADLRTFADN-STVKCDKVL 409 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~--g~~~~V~~~~~Da~~~~~~-~~~~fD~Vl 409 (456)
+|.+|||+|||+|..++.++.. .++|+++|+|+.+++.+++|++.+ |+. +++++++|+..+... ...+||.|+
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~-~i~~i~~Da~~~L~~~~~~~fDvV~ 168 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEGK-DVNILTGDFKEYLPLIKTFHPDYIY 168 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTTC-EEEEEESCGGGSHHHHHHHCCSEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCCC-cEEEEECcHHHhhhhccCCCceEEE
Confidence 4899999999999999998875 479999999999999999999999 885 499999999875322 124799999
Q ss_pred EcCCCCCC
Q 012783 410 LDAPCSGL 417 (456)
Q Consensus 410 lDaPCSg~ 417 (456)
+|||..+.
T Consensus 169 lDPPrr~~ 176 (410)
T 3ll7_A 169 VDPARRSG 176 (410)
T ss_dssp ECCEEC--
T ss_pred ECCCCcCC
Confidence 99999874
No 98
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.97 E-value=3e-09 Score=99.03 Aligned_cols=81 Identities=19% Similarity=0.102 Sum_probs=70.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc-cCCCCccEEEE
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-NSTVKCDKVLL 410 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~-~~~~~fD~Vll 410 (456)
.++.+|||+|||+|..+..++...+ .+.|+|+|+++.+++.++++++..|+.+ +.++++|+..++. ...+.||.|++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVPN-IKLLWVDGSDLTDYFEDGEIDRLYL 117 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCSS-EEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCCC-EEEEeCCHHHHHhhcCCCCCCEEEE
Confidence 4688999999999999999999853 6799999999999999999999999965 8999999987653 22468999999
Q ss_pred cCCC
Q 012783 411 DAPC 414 (456)
Q Consensus 411 DaPC 414 (456)
+.|.
T Consensus 118 ~~~~ 121 (214)
T 1yzh_A 118 NFSD 121 (214)
T ss_dssp ESCC
T ss_pred ECCC
Confidence 9763
No 99
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.97 E-value=1.4e-09 Score=103.07 Aligned_cols=78 Identities=10% Similarity=0.066 Sum_probs=66.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
+.+|++|||+|||+|..++.++.. ++.++|+|+|+++..++.+++|++++|+.++|++..+|+...... ..+||.|++
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-~~~~D~Ivi 90 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-TDQVSVITI 90 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc-CcCCCEEEE
Confidence 357899999999999999999986 456799999999999999999999999998899999998643221 126999987
No 100
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.97 E-value=1.8e-09 Score=101.22 Aligned_cols=80 Identities=20% Similarity=0.251 Sum_probs=68.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccc--ccCCCCccEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA--DNSTVKCDKV 408 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~--~~~~~~fD~V 408 (456)
+.++++|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++.. .+ ++++++|+.... ....++||.|
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~-v~~~~~d~~~~~~~~~~~~~~D~v 147 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RN-IVPILGDATKPEEYRALVPKVDVI 147 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TT-EEEEECCTTCGGGGTTTCCCEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CC-CEEEEccCCCcchhhcccCCceEE
Confidence 678999999999999999999998766789999999999999999998765 44 899999997642 1223589999
Q ss_pred EEcCC
Q 012783 409 LLDAP 413 (456)
Q Consensus 409 llDaP 413 (456)
++|+|
T Consensus 148 ~~~~~ 152 (227)
T 1g8a_A 148 FEDVA 152 (227)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99988
No 101
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.96 E-value=8.3e-10 Score=106.86 Aligned_cols=92 Identities=21% Similarity=0.175 Sum_probs=74.9
Q ss_pred HHHHHHhcCCCCC--CeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcC--------CCceEEEEe
Q 012783 322 AGLVVAVVDPQPG--QSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ--------VNSVIRTIH 391 (456)
Q Consensus 322 s~lv~~~l~~~~g--~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g--------~~~~V~~~~ 391 (456)
...+..++.+.+| .+|||+|||.|..++.+|+. .++|+++|+++..+..+++++++.+ +.+++++++
T Consensus 75 ~e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~ 151 (258)
T 2oyr_A 75 GEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIH 151 (258)
T ss_dssp GSHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEE
T ss_pred HHHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEE
Confidence 4456677777778 99999999999999999997 4689999999999888888877542 324589999
Q ss_pred cccccccccCCCCccEEEEcCCCCC
Q 012783 392 ADLRTFADNSTVKCDKVLLDAPCSG 416 (456)
Q Consensus 392 ~Da~~~~~~~~~~fD~VllDaPCSg 416 (456)
+|+..+.......||+|++|||.-.
T Consensus 152 ~D~~~~L~~~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 152 ASSLTALTDITPRPQVVYLDPMFPH 176 (258)
T ss_dssp SCHHHHSTTCSSCCSEEEECCCCCC
T ss_pred CCHHHHHHhCcccCCEEEEcCCCCC
Confidence 9998865433357999999999854
No 102
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.96 E-value=2.1e-09 Score=102.76 Aligned_cols=99 Identities=9% Similarity=0.120 Sum_probs=76.5
Q ss_pred cccccccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceE
Q 012783 308 GLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVI 387 (456)
Q Consensus 308 ~~~~~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V 387 (456)
..|.+.....|......++..+.+.++.+|||+|||+|..+..++... ++|+++|+++.+++.++++++..|+.+ +
T Consensus 12 ~~~~~s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~-v 87 (260)
T 1vl5_A 12 HMYVTSQIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQ-V 87 (260)
T ss_dssp -----------CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCS-E
T ss_pred eeeecCccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCc-e
Confidence 456666677777777788888888899999999999999999998863 499999999999999999999999876 8
Q ss_pred EEEecccccccccCCCCccEEEEc
Q 012783 388 RTIHADLRTFADNSTVKCDKVLLD 411 (456)
Q Consensus 388 ~~~~~Da~~~~~~~~~~fD~VllD 411 (456)
.++.+|+..++. .+++||+|++.
T Consensus 88 ~~~~~d~~~l~~-~~~~fD~V~~~ 110 (260)
T 1vl5_A 88 EYVQGDAEQMPF-TDERFHIVTCR 110 (260)
T ss_dssp EEEECCC-CCCS-CTTCEEEEEEE
T ss_pred EEEEecHHhCCC-CCCCEEEEEEh
Confidence 999999987653 24689999985
No 103
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.96 E-value=6.6e-09 Score=98.31 Aligned_cols=93 Identities=6% Similarity=0.139 Sum_probs=78.4
Q ss_pred ccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccc
Q 012783 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 396 (456)
Q Consensus 317 vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~ 396 (456)
+.......+...+++.++++|||+|||+|..+..+++. .++|+++|+++.+++.++++++..++...+.++.+|+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 151 (248)
T 2yvl_A 75 IYPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKD 151 (248)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTT
T ss_pred ccchhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhh
Confidence 33445557777788889999999999999999999987 579999999999999999999999985558999999876
Q ss_pred ccccCCCCccEEEEcCC
Q 012783 397 FADNSTVKCDKVLLDAP 413 (456)
Q Consensus 397 ~~~~~~~~fD~VllDaP 413 (456)
... ..+.||.|++|+|
T Consensus 152 ~~~-~~~~~D~v~~~~~ 167 (248)
T 2yvl_A 152 AEV-PEGIFHAAFVDVR 167 (248)
T ss_dssp SCC-CTTCBSEEEECSS
T ss_pred ccc-CCCcccEEEECCc
Confidence 431 2357999999887
No 104
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.95 E-value=4.3e-09 Score=99.29 Aligned_cols=83 Identities=23% Similarity=0.280 Sum_probs=69.4
Q ss_pred hcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccc--ccCCCCc
Q 012783 328 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA--DNSTVKC 405 (456)
Q Consensus 328 ~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~--~~~~~~f 405 (456)
.+.+.++.+|||+|||+|..+..+++..++.++|+++|+++.+++.+.+++++. .+ +.++++|+.... ....++|
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~-v~~~~~d~~~~~~~~~~~~~~ 148 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TN-IIPVIEDARHPHKYRMLIAMV 148 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TT-EEEECSCTTCGGGGGGGCCCE
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CC-eEEEEcccCChhhhcccCCcE
Confidence 345778999999999999999999998766789999999999999888888876 34 889999997632 1124689
Q ss_pred cEEEEcCC
Q 012783 406 DKVLLDAP 413 (456)
Q Consensus 406 D~VllDaP 413 (456)
|+|++|+|
T Consensus 149 D~V~~~~~ 156 (233)
T 2ipx_A 149 DVIFADVA 156 (233)
T ss_dssp EEEEECCC
T ss_pred EEEEEcCC
Confidence 99999988
No 105
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.95 E-value=3.1e-09 Score=108.95 Aligned_cols=91 Identities=15% Similarity=0.154 Sum_probs=77.5
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCC-------------------------------------CceEEEE
Q 012783 322 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG-------------------------------------QGLVYAI 364 (456)
Q Consensus 322 s~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~-------------------------------------~g~V~Av 364 (456)
+..++......++..|||.|||+|+.++.+|....+ ...|+++
T Consensus 190 Aa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~Gv 269 (393)
T 3k0b_A 190 AAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGG 269 (393)
T ss_dssp HHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEE
T ss_pred HHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEE
Confidence 344456677888999999999999999988876432 1469999
Q ss_pred eCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEcCCC
Q 012783 365 DINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPC 414 (456)
Q Consensus 365 Dis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllDaPC 414 (456)
|+++.+++.+++|++..|+.+.|+++++|+..++.. ..||.|++|||.
T Consensus 270 Did~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~--~~fD~Iv~NPPY 317 (393)
T 3k0b_A 270 DIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE--DEYGVVVANPPY 317 (393)
T ss_dssp ESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC--CCSCEEEECCCC
T ss_pred ECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC--CCCCEEEECCCC
Confidence 999999999999999999987799999999887543 589999999997
No 106
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.95 E-value=3.4e-09 Score=108.33 Aligned_cols=91 Identities=15% Similarity=0.184 Sum_probs=77.6
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCC-------------------------------------CceEEEEe
Q 012783 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG-------------------------------------QGLVYAID 365 (456)
Q Consensus 323 ~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~-------------------------------------~g~V~AvD 365 (456)
..++......++..|||.|||+|+..+.+|....+ ...|+++|
T Consensus 184 aall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvD 263 (384)
T 3ldg_A 184 AAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFD 263 (384)
T ss_dssp HHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEE
T ss_pred HHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEE
Confidence 34455667788999999999999999988876432 14699999
Q ss_pred CCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEcCCCC
Q 012783 366 INKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCS 415 (456)
Q Consensus 366 is~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllDaPCS 415 (456)
+++.+++.+++|++..|+.+.++++++|+..++.. ..||.|++|||..
T Consensus 264 id~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~--~~fD~Iv~NPPYG 311 (384)
T 3ldg_A 264 FDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN--KINGVLISNPPYG 311 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC--CCSCEEEECCCCT
T ss_pred CCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc--CCcCEEEECCchh
Confidence 99999999999999999988899999999887543 5899999999984
No 107
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.94 E-value=2.9e-09 Score=108.88 Aligned_cols=106 Identities=19% Similarity=0.225 Sum_probs=83.2
Q ss_pred cccccccccccc------hHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCC------------------------
Q 012783 308 GLLKEGLCAVQD------ESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG------------------------ 357 (456)
Q Consensus 308 ~~~~~G~~~vQd------~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~------------------------ 357 (456)
.+++.|+...|. .-+..++......++..|||.|||+|++++.+|....+
T Consensus 164 ~l~krgyr~~~~~Apl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~ 243 (385)
T 3ldu_A 164 ALHKRGYREKANKAPIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWD 243 (385)
T ss_dssp CTTCCSCCCC--CCCCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHH
T ss_pred hhhhcccccCCCCCCCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHH
Confidence 455566554442 22333455667788999999999999999999876432
Q ss_pred -------------CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEcCCCC
Q 012783 358 -------------QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCS 415 (456)
Q Consensus 358 -------------~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllDaPCS 415 (456)
...|+++|+++.+++.+++|++..|+.+.|++.++|+..+.. ..+||+|++|||..
T Consensus 244 ~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~--~~~~D~Iv~NPPyg 312 (385)
T 3ldu_A 244 VRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS--EDEFGFIITNPPYG 312 (385)
T ss_dssp HHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC--SCBSCEEEECCCCC
T ss_pred HHHHHHHHhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc--CCCCcEEEECCCCc
Confidence 257999999999999999999999998779999999988754 25899999999963
No 108
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.94 E-value=3.9e-09 Score=98.66 Aligned_cols=81 Identities=14% Similarity=0.087 Sum_probs=69.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc-cCCCCccEEEE
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-NSTVKCDKVLL 410 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~-~~~~~fD~Vll 410 (456)
.++.+|||+|||+|..+..+|... +...|+|+|+++.+++.++++++..|+.| |.++++|+..++. ...+.||.|++
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~n-v~~~~~d~~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQN-VKLLNIDADTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSS-EEEECCCGGGHHHHCCTTSCCEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCC-EEEEeCCHHHHHhhcCcCCcCEEEE
Confidence 467899999999999999999885 46899999999999999999999999987 8999999987643 22468999998
Q ss_pred cCCC
Q 012783 411 DAPC 414 (456)
Q Consensus 411 DaPC 414 (456)
..|+
T Consensus 115 ~~~~ 118 (213)
T 2fca_A 115 NFSD 118 (213)
T ss_dssp ESCC
T ss_pred ECCC
Confidence 7654
No 109
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.94 E-value=3.6e-09 Score=97.51 Aligned_cols=88 Identities=17% Similarity=0.164 Sum_probs=73.4
Q ss_pred HHHHHHhcC--CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc
Q 012783 322 AGLVVAVVD--PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (456)
Q Consensus 322 s~lv~~~l~--~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~ 399 (456)
...+...+. +.++.+|||+|||+|..+..+++. +.++|+++|+++.+++.++++++..++.+ +.++++|+..+.
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~- 122 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADV- 122 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTC-
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccC-
Confidence 334444444 567899999999999999998874 45799999999999999999999999987 899999997653
Q ss_pred cCCCCccEEEEcCCCC
Q 012783 400 NSTVKCDKVLLDAPCS 415 (456)
Q Consensus 400 ~~~~~fD~VllDaPCS 415 (456)
.++||.|+++.|..
T Consensus 123 --~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 123 --DGKFDLIVANILAE 136 (205)
T ss_dssp --CSCEEEEEEESCHH
T ss_pred --CCCceEEEECCcHH
Confidence 36899999998764
No 110
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.94 E-value=3.3e-09 Score=104.73 Aligned_cols=93 Identities=11% Similarity=0.177 Sum_probs=78.4
Q ss_pred cccchHHHHHHHhcC-CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccc
Q 012783 316 AVQDESAGLVVAVVD-PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (456)
Q Consensus 316 ~vQd~ss~lv~~~l~-~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da 394 (456)
.+++.....+...+. +.++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++++..|+.+++.++++|+
T Consensus 99 ~~~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 176 (312)
T 3vc1_A 99 RLESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM 176 (312)
T ss_dssp HHHHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred hHHHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh
Confidence 345555556677777 7889999999999999999999875 4689999999999999999999999986799999999
Q ss_pred ccccccCCCCccEEEEc
Q 012783 395 RTFADNSTVKCDKVLLD 411 (456)
Q Consensus 395 ~~~~~~~~~~fD~VllD 411 (456)
..++. ..+.||+|++.
T Consensus 177 ~~~~~-~~~~fD~V~~~ 192 (312)
T 3vc1_A 177 LDTPF-DKGAVTASWNN 192 (312)
T ss_dssp TSCCC-CTTCEEEEEEE
T ss_pred hcCCC-CCCCEeEEEEC
Confidence 87653 24789999873
No 111
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.93 E-value=4.8e-09 Score=94.51 Aligned_cols=94 Identities=20% Similarity=0.250 Sum_probs=77.5
Q ss_pred ccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccc
Q 012783 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 396 (456)
Q Consensus 317 vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~ 396 (456)
.++.....+...+.+.++.+|||+|||+|..+..++... ++|+++|+++.+++.++++++..++...+.++++|+..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 17 TAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE 93 (192)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH
T ss_pred ChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH
Confidence 355555666777888899999999999999999998863 79999999999999999999999984458999999876
Q ss_pred ccccCCCCccEEEEcCCC
Q 012783 397 FADNSTVKCDKVLLDAPC 414 (456)
Q Consensus 397 ~~~~~~~~fD~VllDaPC 414 (456)
.... ...||.|+++.+.
T Consensus 94 ~~~~-~~~~D~v~~~~~~ 110 (192)
T 1l3i_A 94 ALCK-IPDIDIAVVGGSG 110 (192)
T ss_dssp HHTT-SCCEEEEEESCCT
T ss_pred hccc-CCCCCEEEECCch
Confidence 3222 1489999998764
No 112
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.93 E-value=4e-09 Score=97.85 Aligned_cols=87 Identities=15% Similarity=0.256 Sum_probs=75.6
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCC
Q 012783 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402 (456)
Q Consensus 323 ~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~ 402 (456)
..+...+.+.++.+|||+|||+|..+..++...++.++|+++|+++.+++.+++++...++.+ +.++.+|+..++. ..
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-~~~~~~d~~~~~~-~~ 104 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKN-VEVLKSEENKIPL-PD 104 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTT-EEEEECBTTBCSS-CS
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCc-EEEEecccccCCC-CC
Confidence 445666788889999999999999999999987667899999999999999999999999885 8999999987653 34
Q ss_pred CCccEEEEc
Q 012783 403 VKCDKVLLD 411 (456)
Q Consensus 403 ~~fD~VllD 411 (456)
++||.|++.
T Consensus 105 ~~fD~v~~~ 113 (219)
T 3dh0_A 105 NTVDFIFMA 113 (219)
T ss_dssp SCEEEEEEE
T ss_pred CCeeEEEee
Confidence 689999985
No 113
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.93 E-value=4.7e-09 Score=98.49 Aligned_cols=97 Identities=16% Similarity=0.169 Sum_probs=79.1
Q ss_pred ccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEec
Q 012783 313 GLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA 392 (456)
Q Consensus 313 G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~ 392 (456)
|....+......+...+.+.++.+|||+|||+|..+..++... ++|+++|+++.+++.+++++...+ + +.++++
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~--~-v~~~~~ 123 (231)
T 1vbf_A 50 GINTTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN--N-IKLILG 123 (231)
T ss_dssp TEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS--S-EEEEES
T ss_pred CCccCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC--C-eEEEEC
Confidence 4444555556667777888899999999999999999999873 799999999999999999998777 3 889999
Q ss_pred ccccccccCCCCccEEEEcCCCCC
Q 012783 393 DLRTFADNSTVKCDKVLLDAPCSG 416 (456)
Q Consensus 393 Da~~~~~~~~~~fD~VllDaPCSg 416 (456)
|+..... ..++||+|+++.++..
T Consensus 124 d~~~~~~-~~~~fD~v~~~~~~~~ 146 (231)
T 1vbf_A 124 DGTLGYE-EEKPYDRVVVWATAPT 146 (231)
T ss_dssp CGGGCCG-GGCCEEEEEESSBBSS
T ss_pred Ccccccc-cCCCccEEEECCcHHH
Confidence 9876322 2368999999987754
No 114
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.92 E-value=3.5e-09 Score=104.47 Aligned_cols=94 Identities=19% Similarity=0.199 Sum_probs=77.9
Q ss_pred ccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccc
Q 012783 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (456)
Q Consensus 315 ~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da 394 (456)
|.+...-...++..+++.++++|||+|||+|..|..+++. .++|+|+|+++.+++.+++++. +..+ ++++++|+
T Consensus 32 fL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~--~~~~-v~vi~gD~ 105 (295)
T 3gru_A 32 FLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKE--LYNN-IEIIWGDA 105 (295)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHH--HCSS-EEEEESCT
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhc--cCCC-eEEEECch
Confidence 4444445566777888999999999999999999999987 4799999999999999999987 3444 89999999
Q ss_pred ccccccCCCCccEEEEcCCCC
Q 012783 395 RTFADNSTVKCDKVLLDAPCS 415 (456)
Q Consensus 395 ~~~~~~~~~~fD~VllDaPCS 415 (456)
..++... ..||.|+.+.|..
T Consensus 106 l~~~~~~-~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 106 LKVDLNK-LDFNKVVANLPYQ 125 (295)
T ss_dssp TTSCGGG-SCCSEEEEECCGG
T ss_pred hhCCccc-CCccEEEEeCccc
Confidence 8764332 4799999999975
No 115
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.92 E-value=4.2e-09 Score=101.24 Aligned_cols=89 Identities=18% Similarity=0.272 Sum_probs=75.1
Q ss_pred HHHhcC-CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCC
Q 012783 325 VVAVVD-PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 403 (456)
Q Consensus 325 v~~~l~-~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~ 403 (456)
+...+. +.++.+|||+|||+|..+..++.. +.++|+++|+++.+++.++++++..|+.++++++++|+..++.. .+
T Consensus 37 ~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 113 (267)
T 3kkz_A 37 ALSFIDNLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFR-NE 113 (267)
T ss_dssp HHTTCCCCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC-TT
T ss_pred HHHhcccCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCC-CC
Confidence 344444 678999999999999999999986 45799999999999999999999999987899999999876532 47
Q ss_pred CccEEEEcCCCCC
Q 012783 404 KCDKVLLDAPCSG 416 (456)
Q Consensus 404 ~fD~VllDaPCSg 416 (456)
+||.|++..+...
T Consensus 114 ~fD~i~~~~~~~~ 126 (267)
T 3kkz_A 114 ELDLIWSEGAIYN 126 (267)
T ss_dssp CEEEEEESSCGGG
T ss_pred CEEEEEEcCCcee
Confidence 8999998765543
No 116
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.92 E-value=5.8e-09 Score=102.29 Aligned_cols=83 Identities=10% Similarity=0.071 Sum_probs=73.7
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCC
Q 012783 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402 (456)
Q Consensus 323 ~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~ 402 (456)
..+...+.+.+|.+|||+|||+|..+..+++..+ .+|+++|+++.+++.+++++...|+.+++.++++|+..+ .
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~ 135 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF----D 135 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC----C
T ss_pred HHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc----C
Confidence 3456667888999999999999999999999864 789999999999999999999999987799999999876 4
Q ss_pred CCccEEEEc
Q 012783 403 VKCDKVLLD 411 (456)
Q Consensus 403 ~~fD~VllD 411 (456)
++||+|++.
T Consensus 136 ~~fD~v~~~ 144 (302)
T 3hem_A 136 EPVDRIVSL 144 (302)
T ss_dssp CCCSEEEEE
T ss_pred CCccEEEEc
Confidence 789999985
No 117
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.91 E-value=4.3e-09 Score=99.05 Aligned_cols=79 Identities=13% Similarity=0.062 Sum_probs=68.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc--cCCCCccEEEE
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD--NSTVKCDKVLL 410 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~--~~~~~fD~Vll 410 (456)
++..|||+|||+|..+..+|... +...|+|+|+++.++..++++++..|+.| +.++++|+..+.. ...++||.|++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~n-v~~~~~Da~~~l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLSN-LRVMCHDAVEVLHKMIPDNSLRMVQL 111 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCSS-EEEECSCHHHHHHHHSCTTCEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCCc-EEEEECCHHHHHHHHcCCCChheEEE
Confidence 67899999999999999999875 46789999999999999999999999988 8999999987522 23578999999
Q ss_pred cCC
Q 012783 411 DAP 413 (456)
Q Consensus 411 DaP 413 (456)
.-|
T Consensus 112 ~~~ 114 (218)
T 3dxy_A 112 FFP 114 (218)
T ss_dssp ESC
T ss_pred eCC
Confidence 744
No 118
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.90 E-value=2e-09 Score=102.86 Aligned_cols=90 Identities=18% Similarity=0.124 Sum_probs=70.6
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHHc---CCCce-------------------
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCL-SGQGLVYAIDINKGRLRILNETAKLH---QVNSV------------------- 386 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~-~~~g~V~AvDis~~rl~~l~~n~~r~---g~~~~------------------- 386 (456)
...++.+|||+|||+|..+..++..+ .+..+|+++|+|+.+++.+++|+... ++.+.
T Consensus 48 ~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (250)
T 1o9g_A 48 PGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEA 127 (250)
T ss_dssp SCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred ccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhh
Confidence 33467899999999999999999873 23468999999999999999999877 65433
Q ss_pred ------EE-------------EEeccccccccc----CCCCccEEEEcCCCCCCcc
Q 012783 387 ------IR-------------TIHADLRTFADN----STVKCDKVLLDAPCSGLGV 419 (456)
Q Consensus 387 ------V~-------------~~~~Da~~~~~~----~~~~fD~VllDaPCSg~G~ 419 (456)
++ ++++|+...... ...+||+|++|+|+.....
T Consensus 128 ~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~ 183 (250)
T 1o9g_A 128 AQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTH 183 (250)
T ss_dssp HHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSS
T ss_pred hhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeecccc
Confidence 56 899998764321 2248999999999875443
No 119
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.90 E-value=3.8e-09 Score=99.61 Aligned_cols=81 Identities=21% Similarity=0.213 Sum_probs=67.7
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccc----ccccCCCC
Q 012783 329 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT----FADNSTVK 404 (456)
Q Consensus 329 l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~----~~~~~~~~ 404 (456)
+.+.++.+|||+|||+|..+.+++...+ .++|+++|+++.+++.++++++.. .+ +.++.+|+.. .+. .+.
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~-v~~~~~d~~~~~~~~~~--~~~ 143 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER--EN-IIPILGDANKPQEYANI--VEK 143 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC--TT-EEEEECCTTCGGGGTTT--SCC
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC--CC-eEEEECCCCCccccccc--Ccc
Confidence 4567899999999999999999999865 689999999999999999998765 44 8899999976 322 268
Q ss_pred ccEEEEcCCCC
Q 012783 405 CDKVLLDAPCS 415 (456)
Q Consensus 405 fD~VllDaPCS 415 (456)
||.|+.|+|..
T Consensus 144 ~D~v~~~~~~~ 154 (230)
T 1fbn_A 144 VDVIYEDVAQP 154 (230)
T ss_dssp EEEEEECCCST
T ss_pred EEEEEEecCCh
Confidence 99999887643
No 120
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.89 E-value=5.6e-09 Score=99.31 Aligned_cols=83 Identities=19% Similarity=0.314 Sum_probs=72.1
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEE
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vl 409 (456)
.+.++.+|||+|||+|..+..+++..+ ++|+++|+++.+++.+++++...|+.++++++++|+..++.. .++||+|+
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~fD~v~ 119 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQ-NEELDLIW 119 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSC-TTCEEEEE
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCC-CCCEEEEE
Confidence 567889999999999999999999853 499999999999999999999999988899999999876532 47899999
Q ss_pred EcCCCC
Q 012783 410 LDAPCS 415 (456)
Q Consensus 410 lDaPCS 415 (456)
+.....
T Consensus 120 ~~~~l~ 125 (257)
T 3f4k_A 120 SEGAIY 125 (257)
T ss_dssp EESCSC
T ss_pred ecChHh
Confidence 875443
No 121
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.88 E-value=2.1e-09 Score=95.48 Aligned_cols=78 Identities=15% Similarity=0.188 Sum_probs=66.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---CCCCccEEE
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---STVKCDKVL 409 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---~~~~fD~Vl 409 (456)
++.+|||+|||+|..+..+++.. ..|+++|+++.+++.+++|++..++ + ++++++|+...... ..++||.|+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~-~-~~~~~~d~~~~~~~~~~~~~~~D~i~ 115 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG---WEAVLVEKDPEAVRLLKENVRRTGL-G-ARVVALPVEVFLPEAKAQGERFTVAF 115 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT---CEEEEECCCHHHHHHHHHHHHHHTC-C-CEEECSCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHHcCC-c-eEEEeccHHHHHHhhhccCCceEEEE
Confidence 68899999999999999999862 3499999999999999999999988 4 89999998774221 124799999
Q ss_pred EcCCCC
Q 012783 410 LDAPCS 415 (456)
Q Consensus 410 lDaPCS 415 (456)
+|+|..
T Consensus 116 ~~~~~~ 121 (171)
T 1ws6_A 116 MAPPYA 121 (171)
T ss_dssp ECCCTT
T ss_pred ECCCCc
Confidence 999976
No 122
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.87 E-value=4.6e-09 Score=96.50 Aligned_cols=74 Identities=19% Similarity=0.245 Sum_probs=63.4
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEE
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vl 409 (456)
.+.++.+|||+|||+|..+..++.. +..+|+++|+++.+++.+++|+. + ++++++|+..++ ++||.|+
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~-----~-~~~~~~d~~~~~----~~~D~v~ 115 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCG-----G-VNFMVADVSEIS----GKYDTWI 115 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT-----T-SEEEECCGGGCC----CCEEEEE
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC-----C-CEEEECcHHHCC----CCeeEEE
Confidence 4567899999999999999999876 44689999999999999999875 3 789999998753 5899999
Q ss_pred EcCCCC
Q 012783 410 LDAPCS 415 (456)
Q Consensus 410 lDaPCS 415 (456)
+|+|..
T Consensus 116 ~~~p~~ 121 (200)
T 1ne2_A 116 MNPPFG 121 (200)
T ss_dssp ECCCC-
T ss_pred ECCCch
Confidence 999964
No 123
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.86 E-value=1.7e-09 Score=99.75 Aligned_cols=74 Identities=23% Similarity=0.329 Sum_probs=59.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc------C---
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN------S--- 401 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~------~--- 401 (456)
+++|.+|||+|||||++|..+++. .++|+|+|+++.. ...+ ++++++|+...... .
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~~~-v~~~~~D~~~~~~~~~~~~~~~~~ 87 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EIAG-VRFIRCDIFKETIFDDIDRALREE 87 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CCTT-CEEEECCTTSSSHHHHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cCCC-eEEEEccccCHHHHHHHHHHhhcc
Confidence 568999999999999999999986 6899999999751 2344 78999998764310 0
Q ss_pred -CCCccEEEEcCCCCCCcc
Q 012783 402 -TVKCDKVLLDAPCSGLGV 419 (456)
Q Consensus 402 -~~~fD~VllDaPCSg~G~ 419 (456)
.++||+|++|+++..+|.
T Consensus 88 ~~~~~D~Vlsd~~~~~~g~ 106 (191)
T 3dou_A 88 GIEKVDDVVSDAMAKVSGI 106 (191)
T ss_dssp TCSSEEEEEECCCCCCCSC
T ss_pred cCCcceEEecCCCcCCCCC
Confidence 138999999999887776
No 124
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.86 E-value=1.2e-08 Score=97.98 Aligned_cols=91 Identities=18% Similarity=0.196 Sum_probs=76.3
Q ss_pred cchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccc
Q 012783 318 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 397 (456)
Q Consensus 318 Qd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~ 397 (456)
|..-...+...+.+.++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++++..|+.+++.++.+|+..+
T Consensus 46 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 123 (273)
T 3bus_A 46 TDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL 123 (273)
T ss_dssp HHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC
Confidence 33334455666778899999999999999999999875 4799999999999999999999999887799999999876
Q ss_pred cccCCCCccEEEEc
Q 012783 398 ADNSTVKCDKVLLD 411 (456)
Q Consensus 398 ~~~~~~~fD~VllD 411 (456)
+.. .++||+|++.
T Consensus 124 ~~~-~~~fD~v~~~ 136 (273)
T 3bus_A 124 PFE-DASFDAVWAL 136 (273)
T ss_dssp CSC-TTCEEEEEEE
T ss_pred CCC-CCCccEEEEe
Confidence 532 3689999974
No 125
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.85 E-value=1e-08 Score=104.61 Aligned_cols=92 Identities=16% Similarity=0.264 Sum_probs=75.7
Q ss_pred chHHHHHHHhc------CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEec
Q 012783 319 DESAGLVVAVV------DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA 392 (456)
Q Consensus 319 d~ss~lv~~~l------~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~ 392 (456)
|..+.++...+ ...++.+|||+|||+|..+..+++. ..+|+++|+++.+++.+++|++..++. ++++++
T Consensus 213 d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~ 287 (381)
T 3dmg_A 213 DPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK--AQALHS 287 (381)
T ss_dssp CHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC--CEEEEC
T ss_pred CHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC--eEEEEc
Confidence 44555544444 2347889999999999999999986 469999999999999999999999886 789999
Q ss_pred ccccccccCCCCccEEEEcCCCCC
Q 012783 393 DLRTFADNSTVKCDKVLLDAPCSG 416 (456)
Q Consensus 393 Da~~~~~~~~~~fD~VllDaPCSg 416 (456)
|+...... .++||.|++|+|+..
T Consensus 288 D~~~~~~~-~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 288 DVDEALTE-EARFDIIVTNPPFHV 310 (381)
T ss_dssp STTTTSCT-TCCEEEEEECCCCCT
T ss_pred chhhcccc-CCCeEEEEECCchhh
Confidence 99876543 368999999999875
No 126
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.85 E-value=9.5e-09 Score=94.66 Aligned_cols=89 Identities=16% Similarity=0.195 Sum_probs=74.5
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc
Q 012783 321 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN 400 (456)
Q Consensus 321 ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~ 400 (456)
....+...+...++ +|||+|||+|..+..+++. +..+|+++|+++.+++.++++++..++.+++.++++|+..++.
T Consensus 32 ~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~- 107 (219)
T 3dlc_A 32 IAENIINRFGITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI- 107 (219)
T ss_dssp HHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS-
T ss_pred HHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC-
Confidence 34445556666667 9999999999999999987 4579999999999999999999999987679999999987653
Q ss_pred CCCCccEEEEcCC
Q 012783 401 STVKCDKVLLDAP 413 (456)
Q Consensus 401 ~~~~fD~VllDaP 413 (456)
..++||.|++...
T Consensus 108 ~~~~~D~v~~~~~ 120 (219)
T 3dlc_A 108 EDNYADLIVSRGS 120 (219)
T ss_dssp CTTCEEEEEEESC
T ss_pred CcccccEEEECch
Confidence 3468999998653
No 127
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.84 E-value=1.4e-09 Score=103.64 Aligned_cols=93 Identities=13% Similarity=0.134 Sum_probs=70.0
Q ss_pred cccc-chHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHH---cCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEE
Q 012783 315 CAVQ-DESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASC---LSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTI 390 (456)
Q Consensus 315 ~~vQ-d~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~---~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~ 390 (456)
...| .....++..++...++.+|||+|||+|+.|..+++. +.+.++|+++|+++.+++.++ +..++|+++
T Consensus 62 ~~~~~p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~ 135 (236)
T 2bm8_A 62 RMLKDPDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLH 135 (236)
T ss_dssp ECCSCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEE
T ss_pred cccCCHHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEE
Confidence 3445 333445555555556789999999999999999997 566789999999999988776 222348999
Q ss_pred ecccccc---cccCCCCccEEEEcCC
Q 012783 391 HADLRTF---ADNSTVKCDKVLLDAP 413 (456)
Q Consensus 391 ~~Da~~~---~~~~~~~fD~VllDaP 413 (456)
++|+..+ +.....+||.|++|+.
T Consensus 136 ~gD~~~~~~l~~~~~~~fD~I~~d~~ 161 (236)
T 2bm8_A 136 QGDCSDLTTFEHLREMAHPLIFIDNA 161 (236)
T ss_dssp ECCSSCSGGGGGGSSSCSSEEEEESS
T ss_pred ECcchhHHHHHhhccCCCCEEEECCc
Confidence 9999874 3222247999999876
No 128
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.84 E-value=6.1e-09 Score=111.04 Aligned_cols=109 Identities=14% Similarity=0.145 Sum_probs=86.3
Q ss_pred cccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCC-----------------ceEEEEeCCHHHHHHH
Q 012783 312 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQ-----------------GLVYAIDINKGRLRIL 374 (456)
Q Consensus 312 ~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~-----------------g~V~AvDis~~rl~~l 374 (456)
.|.|+--..-+.+++..+.+.++.+|+|.|||+|++.+.++..+... ..|+++|+++.+++.+
T Consensus 148 ~G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 148 AGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp --CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred CCeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 36566555566777888999999999999999999999998876422 3799999999999999
Q ss_pred HHHHHHcCCCc----eEEEEecccccccccCCCCccEEEEcCCCCCCccc
Q 012783 375 NETAKLHQVNS----VIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVL 420 (456)
Q Consensus 375 ~~n~~r~g~~~----~V~~~~~Da~~~~~~~~~~fD~VllDaPCSg~G~i 420 (456)
+.|+...|+.+ .+.+.++|+...+.....+||+|+.+||+++....
T Consensus 228 ~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~ 277 (541)
T 2ar0_A 228 LMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGT 277 (541)
T ss_dssp HHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSC
T ss_pred HHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccch
Confidence 99999888864 15678999866443233689999999999976543
No 129
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.84 E-value=9.5e-09 Score=98.85 Aligned_cols=96 Identities=16% Similarity=0.134 Sum_probs=77.2
Q ss_pred cchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHH------HHHHHHHHHHHcCCCceEEEEe
Q 012783 318 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKG------RLRILNETAKLHQVNSVIRTIH 391 (456)
Q Consensus 318 Qd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~------rl~~l~~n~~r~g~~~~V~~~~ 391 (456)
|......+...+.+.++.+|||+|||+|..+..++...++.++|+++|+++. +++.++++++..++..+++++.
T Consensus 28 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~ 107 (275)
T 3bkx_A 28 QTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHF 107 (275)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEEC
T ss_pred HHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEE
Confidence 4444455666778889999999999999999999998755689999999997 9999999999988866699999
Q ss_pred cc---cccccccCCCCccEEEEcCCC
Q 012783 392 AD---LRTFADNSTVKCDKVLLDAPC 414 (456)
Q Consensus 392 ~D---a~~~~~~~~~~fD~VllDaPC 414 (456)
+| ...++. ..++||.|++....
T Consensus 108 ~d~~~~~~~~~-~~~~fD~v~~~~~l 132 (275)
T 3bkx_A 108 NTNLSDDLGPI-ADQHFDRVVLAHSL 132 (275)
T ss_dssp SCCTTTCCGGG-TTCCCSEEEEESCG
T ss_pred CChhhhccCCC-CCCCEEEEEEccch
Confidence 98 333322 24689999986543
No 130
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.83 E-value=1.5e-08 Score=92.11 Aligned_cols=85 Identities=19% Similarity=0.178 Sum_probs=72.6
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCC
Q 012783 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402 (456)
Q Consensus 323 ~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~ 402 (456)
..+...+...++.+|||+|||+|..+..+++. ..+|+++|+++.+++.++++++..++++ +.++++|+..++. .
T Consensus 22 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~-~~~~~~d~~~~~~--~ 95 (199)
T 2xvm_A 22 SEVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDN-LHTRVVDLNNLTF--D 95 (199)
T ss_dssp HHHHHHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTT-EEEEECCGGGCCC--C
T ss_pred HHHHHHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCC-cEEEEcchhhCCC--C
Confidence 34556677778899999999999999999986 4699999999999999999999998876 8999999987654 4
Q ss_pred CCccEEEEcCC
Q 012783 403 VKCDKVLLDAP 413 (456)
Q Consensus 403 ~~fD~VllDaP 413 (456)
++||.|++...
T Consensus 96 ~~~D~v~~~~~ 106 (199)
T 2xvm_A 96 RQYDFILSTVV 106 (199)
T ss_dssp CCEEEEEEESC
T ss_pred CCceEEEEcch
Confidence 78999997643
No 131
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.83 E-value=7.2e-09 Score=104.04 Aligned_cols=82 Identities=16% Similarity=0.127 Sum_probs=70.2
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCC----ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCc
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQ----GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 405 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~----g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~f 405 (456)
.+.++.+|||+|||+|+.+..+++.+... ..|+|+|+++.+++.++.|+...|+. +.++++|+.... ...+|
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~--~~i~~~D~l~~~--~~~~f 202 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQK--MTLLHQDGLANL--LVDPV 202 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCC--CEEEESCTTSCC--CCCCE
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCC--ceEEECCCCCcc--ccCCc
Confidence 56678999999999999999999887533 78999999999999999999988883 688999986532 23689
Q ss_pred cEEEEcCCCC
Q 012783 406 DKVLLDAPCS 415 (456)
Q Consensus 406 D~VllDaPCS 415 (456)
|.|++|||++
T Consensus 203 D~Ii~NPPfg 212 (344)
T 2f8l_A 203 DVVISDLPVG 212 (344)
T ss_dssp EEEEEECCCS
T ss_pred cEEEECCCCC
Confidence 9999999973
No 132
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.83 E-value=5.7e-09 Score=108.60 Aligned_cols=107 Identities=15% Similarity=0.164 Sum_probs=86.3
Q ss_pred cccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcC------------CCceEEEEeCCHHHHHHHHHHHH
Q 012783 312 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLS------------GQGLVYAIDINKGRLRILNETAK 379 (456)
Q Consensus 312 ~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~------------~~g~V~AvDis~~rl~~l~~n~~ 379 (456)
.|.|+--..-+.+++..+.+.++.+|||.|||+|+..+.+++.+. ....|+|+|+++.+++.++.|+.
T Consensus 150 ~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 150 AGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp CGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 355554455667788888999999999999999999999988752 23579999999999999999999
Q ss_pred HcCCCc-eEEEEecccccccccCCCCccEEEEcCCCCCCccc
Q 012783 380 LHQVNS-VIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVL 420 (456)
Q Consensus 380 r~g~~~-~V~~~~~Da~~~~~~~~~~fD~VllDaPCSg~G~i 420 (456)
..|+.. .+.+.++|+...+. ..+||.|+.+||.++....
T Consensus 230 l~g~~~~~~~i~~gD~l~~~~--~~~fD~Iv~NPPf~~~~~~ 269 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKEP--STLVDVILANPPFGTRPAG 269 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSCC--SSCEEEEEECCCSSCCCTT
T ss_pred HhCCCcCCCCEeeCCCCCCcc--cCCcCEEEECCCCCCcccc
Confidence 988852 36788999876543 2489999999999987654
No 133
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.83 E-value=1.4e-08 Score=96.87 Aligned_cols=83 Identities=11% Similarity=0.169 Sum_probs=68.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--------CCCceEEEEeccccc-ccc-c
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--------QVNSVIRTIHADLRT-FAD-N 400 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~--------g~~~~V~~~~~Da~~-~~~-~ 400 (456)
+.++.+|||+|||+|+.+..++... +.+.|+++|+++.+++.++++++.+ |+.| +.++++|+.. ++. .
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~n-v~~~~~D~~~~l~~~~ 124 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQN-INVLRGNAMKFLPNFF 124 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTT-EEEEECCTTSCGGGTS
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCc-EEEEeccHHHHHHHhc
Confidence 3568899999999999999999875 4579999999999999999999887 8876 8999999986 332 2
Q ss_pred CCCCccEEEEcCCCC
Q 012783 401 STVKCDKVLLDAPCS 415 (456)
Q Consensus 401 ~~~~fD~VllDaPCS 415 (456)
..+.||.|++.-|..
T Consensus 125 ~~~~~d~v~~~~p~p 139 (246)
T 2vdv_E 125 EKGQLSKMFFCFPDP 139 (246)
T ss_dssp CTTCEEEEEEESCCC
T ss_pred cccccCEEEEECCCc
Confidence 246899998776553
No 134
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.80 E-value=1.9e-08 Score=96.18 Aligned_cols=96 Identities=13% Similarity=0.129 Sum_probs=77.3
Q ss_pred cccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecc
Q 012783 314 LCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHAD 393 (456)
Q Consensus 314 ~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~D 393 (456)
.|.++......++..+++.++++|||+|||+|..|..+++. .++|+|+|+++.+++.++++++. .+ +++++++|
T Consensus 11 ~fl~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~--~~-~v~~~~~D 84 (244)
T 1qam_A 11 NFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR---CNFVTAIEIDHKLCKTTENKLVD--HD-NFQVLNKD 84 (244)
T ss_dssp CBCCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHTTT--CC-SEEEECCC
T ss_pred cccCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc---CCeEEEEECCHHHHHHHHHhhcc--CC-CeEEEECh
Confidence 35556666677788888889999999999999999999987 37999999999999999998764 23 48999999
Q ss_pred cccccccCCCCccEEEEcCCCCC
Q 012783 394 LRTFADNSTVKCDKVLLDAPCSG 416 (456)
Q Consensus 394 a~~~~~~~~~~fD~VllDaPCSg 416 (456)
+..++......| .|+.|+|..-
T Consensus 85 ~~~~~~~~~~~~-~vv~nlPy~~ 106 (244)
T 1qam_A 85 ILQFKFPKNQSY-KIFGNIPYNI 106 (244)
T ss_dssp GGGCCCCSSCCC-EEEEECCGGG
T ss_pred HHhCCcccCCCe-EEEEeCCccc
Confidence 987653322345 7899999863
No 135
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.80 E-value=8.8e-09 Score=101.51 Aligned_cols=85 Identities=8% Similarity=0.056 Sum_probs=65.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--CC-CceEEEEecccccccccCCCCccEEE
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV-NSVIRTIHADLRTFADNSTVKCDKVL 409 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~--g~-~~~V~~~~~Da~~~~~~~~~~fD~Vl 409 (456)
.+.+|||+|||+|+.+..+++.. +.++|+++|+++.+++.+++++..+ ++ ..+++++.+|+..+.....++||+|+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 45899999999999999998863 4579999999999999999998652 33 23589999999875443446899999
Q ss_pred EcCCCCCCc
Q 012783 410 LDAPCSGLG 418 (456)
Q Consensus 410 lDaPCSg~G 418 (456)
+|+|+.+.|
T Consensus 169 ~d~~~~~~~ 177 (296)
T 1inl_A 169 IDSTDPTAG 177 (296)
T ss_dssp EEC------
T ss_pred EcCCCcccC
Confidence 999986344
No 136
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.80 E-value=2.3e-08 Score=96.91 Aligned_cols=82 Identities=15% Similarity=0.189 Sum_probs=71.0
Q ss_pred HHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCC
Q 012783 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 403 (456)
Q Consensus 324 lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~ 403 (456)
.+...+.+.++.+|||+|||+|..+..+++..+ .+|+++|+++.+++.++++++..|+...+.++.+|+..++ +
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----~ 128 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD----E 128 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC----C
T ss_pred HHHHHcCCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC----C
Confidence 445566778899999999999999999997653 4999999999999999999999998767999999997654 6
Q ss_pred CccEEEEc
Q 012783 404 KCDKVLLD 411 (456)
Q Consensus 404 ~fD~VllD 411 (456)
+||+|++.
T Consensus 129 ~fD~v~~~ 136 (287)
T 1kpg_A 129 PVDRIVSI 136 (287)
T ss_dssp CCSEEEEE
T ss_pred CeeEEEEe
Confidence 89999975
No 137
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.80 E-value=1e-08 Score=99.07 Aligned_cols=90 Identities=17% Similarity=0.203 Sum_probs=73.6
Q ss_pred chHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccc
Q 012783 319 DESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA 398 (456)
Q Consensus 319 d~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~ 398 (456)
..-...++..+++.++++|||+|||+|..|..+++. .++|+|+|+++.+++.+++++.. .. +++++++|+..++
T Consensus 15 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~--~~-~v~~i~~D~~~~~ 88 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ--QK-NITIYQNDALQFD 88 (255)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT--CT-TEEEEESCTTTCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh--CC-CcEEEEcchHhCC
Confidence 344556777888999999999999999999999886 37999999999999999999865 33 4899999998764
Q ss_pred ccC---CCCccEEEEcCCCC
Q 012783 399 DNS---TVKCDKVLLDAPCS 415 (456)
Q Consensus 399 ~~~---~~~fD~VllDaPCS 415 (456)
... .++|| |+.++|..
T Consensus 89 ~~~~~~~~~~~-vv~NlPY~ 107 (255)
T 3tqs_A 89 FSSVKTDKPLR-VVGNLPYN 107 (255)
T ss_dssp GGGSCCSSCEE-EEEECCHH
T ss_pred HHHhccCCCeE-EEecCCcc
Confidence 321 24688 89999985
No 138
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.79 E-value=2.5e-08 Score=98.36 Aligned_cols=84 Identities=14% Similarity=0.164 Sum_probs=72.6
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCC
Q 012783 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402 (456)
Q Consensus 323 ~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~ 402 (456)
..+...+.+.++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++++..|+.+.+.++.+|+..++
T Consensus 80 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---- 153 (318)
T 2fk8_A 80 DLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---- 153 (318)
T ss_dssp HHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC----
T ss_pred HHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC----
Confidence 344556677899999999999999999999876 35999999999999999999999998877999999997763
Q ss_pred CCccEEEEcC
Q 012783 403 VKCDKVLLDA 412 (456)
Q Consensus 403 ~~fD~VllDa 412 (456)
++||+|++..
T Consensus 154 ~~fD~v~~~~ 163 (318)
T 2fk8_A 154 EPVDRIVSIE 163 (318)
T ss_dssp CCCSEEEEES
T ss_pred CCcCEEEEeC
Confidence 6899999863
No 139
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.78 E-value=1.4e-08 Score=94.42 Aligned_cols=86 Identities=14% Similarity=0.094 Sum_probs=70.2
Q ss_pred HHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc----eEEEEecccccccc
Q 012783 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS----VIRTIHADLRTFAD 399 (456)
Q Consensus 324 lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~----~V~~~~~Da~~~~~ 399 (456)
.+...+...++.+|||+|||+|..+..+++.. +...|+++|+++.+++.++++++..++.. ++.++++|+...+.
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 98 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK 98 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG
T ss_pred HHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc
Confidence 44555566778999999999999999998853 44799999999999999999998888763 58999999865443
Q ss_pred cCCCCccEEEEc
Q 012783 400 NSTVKCDKVLLD 411 (456)
Q Consensus 400 ~~~~~fD~VllD 411 (456)
. .++||.|++.
T Consensus 99 ~-~~~fD~v~~~ 109 (217)
T 3jwh_A 99 R-FHGYDAATVI 109 (217)
T ss_dssp G-GCSCSEEEEE
T ss_pred c-CCCcCEEeeH
Confidence 2 3689999974
No 140
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.78 E-value=2.6e-08 Score=97.04 Aligned_cols=89 Identities=10% Similarity=0.035 Sum_probs=74.6
Q ss_pred hHHHHHHHhc----CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccc
Q 012783 320 ESAGLVVAVV----DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLR 395 (456)
Q Consensus 320 ~ss~lv~~~l----~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~ 395 (456)
.....+...+ ...++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++++..|+.+++.++++|+.
T Consensus 65 ~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 142 (297)
T 2o57_A 65 RTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL 142 (297)
T ss_dssp HHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT
T ss_pred HHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc
Confidence 3334455566 77889999999999999999999875 35999999999999999999999998767999999998
Q ss_pred cccccCCCCccEEEEc
Q 012783 396 TFADNSTVKCDKVLLD 411 (456)
Q Consensus 396 ~~~~~~~~~fD~VllD 411 (456)
.++.. .++||+|++.
T Consensus 143 ~~~~~-~~~fD~v~~~ 157 (297)
T 2o57_A 143 EIPCE-DNSYDFIWSQ 157 (297)
T ss_dssp SCSSC-TTCEEEEEEE
T ss_pred cCCCC-CCCEeEEEec
Confidence 76532 3689999974
No 141
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.78 E-value=1.9e-08 Score=92.50 Aligned_cols=75 Identities=16% Similarity=0.278 Sum_probs=66.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEc
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllD 411 (456)
++.+|||+|||+|..+..++... +.++|+++|+++.+++.++++++..++.+ ++++++|+..+.. .++||.|+++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~--~~~~D~i~~~ 139 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFPS--EPPFDGVISR 139 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSCC--CSCEEEEECS
T ss_pred CCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCCc--cCCcCEEEEe
Confidence 47899999999999999999876 46799999999999999999999999987 8999999987652 3689999975
No 142
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.77 E-value=1.7e-08 Score=101.34 Aligned_cols=91 Identities=12% Similarity=0.162 Sum_probs=77.6
Q ss_pred chHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccc
Q 012783 319 DESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA 398 (456)
Q Consensus 319 d~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~ 398 (456)
|..+.++...+.+.++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.++++++..++. ++++.+|+....
T Consensus 182 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~ 258 (343)
T 2pjd_A 182 DVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV 258 (343)
T ss_dssp CHHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC
T ss_pred cHHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc
Confidence 5567788888877778899999999999999999874 4569999999999999999999999886 466889987643
Q ss_pred ccCCCCccEEEEcCCCC
Q 012783 399 DNSTVKCDKVLLDAPCS 415 (456)
Q Consensus 399 ~~~~~~fD~VllDaPCS 415 (456)
.++||.|++++|..
T Consensus 259 ---~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 259 ---KGRFDMIISNPPFH 272 (343)
T ss_dssp ---CSCEEEEEECCCCC
T ss_pred ---cCCeeEEEECCCcc
Confidence 36899999999874
No 143
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.76 E-value=8.3e-09 Score=92.94 Aligned_cols=82 Identities=17% Similarity=0.158 Sum_probs=64.0
Q ss_pred chHHHHHHHhcCC--CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccc
Q 012783 319 DESAGLVVAVVDP--QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 396 (456)
Q Consensus 319 d~ss~lv~~~l~~--~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~ 396 (456)
.+.+..++..+.. .++.+|||+|||+|..+..+++. . +|+|+|+++.+++. .+.++++++|+..
T Consensus 7 ~~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~---~-~v~gvD~s~~~~~~----------~~~~~~~~~d~~~ 72 (170)
T 3q87_B 7 GEDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKR---N-TVVSTDLNIRALES----------HRGGNLVRADLLC 72 (170)
T ss_dssp CHHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTT---S-EEEEEESCHHHHHT----------CSSSCEEECSTTT
T ss_pred CccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhc---C-cEEEEECCHHHHhc----------ccCCeEEECChhh
Confidence 3444555555655 67889999999999999999875 2 99999999999987 2337889999976
Q ss_pred ccccCCCCccEEEEcCCCCC
Q 012783 397 FADNSTVKCDKVLLDAPCSG 416 (456)
Q Consensus 397 ~~~~~~~~fD~VllDaPCSg 416 (456)
... .++||.|++++|...
T Consensus 73 ~~~--~~~fD~i~~n~~~~~ 90 (170)
T 3q87_B 73 SIN--QESVDVVVFNPPYVP 90 (170)
T ss_dssp TBC--GGGCSEEEECCCCBT
T ss_pred hcc--cCCCCEEEECCCCcc
Confidence 322 268999999998753
No 144
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.75 E-value=4.2e-08 Score=95.98 Aligned_cols=82 Identities=16% Similarity=0.099 Sum_probs=68.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc-CCCceEEEEecccccccccC-----CCC
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-QVNSVIRTIHADLRTFADNS-----TVK 404 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~-g~~~~V~~~~~Da~~~~~~~-----~~~ 404 (456)
..++.+|||+|||+|..+..+++.+.+..+|+++|+++.+++.++++++.. +...++.++++|+..++... .++
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 357899999999999999999987656789999999999999999999987 44445999999998765432 268
Q ss_pred ccEEEEcC
Q 012783 405 CDKVLLDA 412 (456)
Q Consensus 405 fD~VllDa 412 (456)
||+|++..
T Consensus 114 fD~V~~~~ 121 (299)
T 3g5t_A 114 IDMITAVE 121 (299)
T ss_dssp EEEEEEES
T ss_pred eeEEeHhh
Confidence 99999853
No 145
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.75 E-value=2.3e-08 Score=97.22 Aligned_cols=88 Identities=20% Similarity=0.069 Sum_probs=73.6
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc
Q 012783 321 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN 400 (456)
Q Consensus 321 ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~ 400 (456)
...++..++...++.+|||+|||+|..+..+++..++..+|+++|+++.+++.+++++...+. +++++++|+..++.
T Consensus 10 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~- 86 (284)
T 3gu3_A 10 VSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIEL- 86 (284)
T ss_dssp HHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCC-
T ss_pred HHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCc-
Confidence 344444455677899999999999999999998876568999999999999999999988776 48999999987654
Q ss_pred CCCCccEEEEcC
Q 012783 401 STVKCDKVLLDA 412 (456)
Q Consensus 401 ~~~~fD~VllDa 412 (456)
+++||.|++..
T Consensus 87 -~~~fD~v~~~~ 97 (284)
T 3gu3_A 87 -NDKYDIAICHA 97 (284)
T ss_dssp -SSCEEEEEEES
T ss_pred -CCCeeEEEECC
Confidence 36899999865
No 146
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.75 E-value=7.1e-09 Score=101.94 Aligned_cols=83 Identities=13% Similarity=0.040 Sum_probs=71.3
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEE
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vl 409 (456)
.+.++.+|||+|||+|..+..++....+.++|+++|+++.+++.+++++...|+.++++++++|+..++.. ++||.|+
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~fD~v~ 192 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR--EGYDLLT 192 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC--SCEEEEE
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc--CCeEEEE
Confidence 35689999999999999999986444567899999999999999999999999988899999999887533 7899999
Q ss_pred EcCCC
Q 012783 410 LDAPC 414 (456)
Q Consensus 410 lDaPC 414 (456)
+..+.
T Consensus 193 ~~~~~ 197 (305)
T 3ocj_A 193 SNGLN 197 (305)
T ss_dssp CCSSG
T ss_pred ECChh
Confidence 85543
No 147
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.74 E-value=2.2e-08 Score=97.59 Aligned_cols=89 Identities=16% Similarity=0.153 Sum_probs=73.4
Q ss_pred hHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc
Q 012783 320 ESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (456)
Q Consensus 320 ~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~ 399 (456)
.-...++..+++.++ +|||+|||+|..|..+++. .++|+|+|+|+.+++.+++++. + . +++++++|+..++.
T Consensus 34 ~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~---~~~V~avEid~~~~~~l~~~~~--~-~-~v~vi~~D~l~~~~ 105 (271)
T 3fut_A 34 AHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA---GAEVTAIEKDLRLRPVLEETLS--G-L-PVRLVFQDALLYPW 105 (271)
T ss_dssp HHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT---TCCEEEEESCGGGHHHHHHHTT--T-S-SEEEEESCGGGSCG
T ss_pred HHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcC--C-C-CEEEEECChhhCCh
Confidence 344566778888899 9999999999999999986 3789999999999999999875 2 3 48999999987654
Q ss_pred cCCCCccEEEEcCCCCC
Q 012783 400 NSTVKCDKVLLDAPCSG 416 (456)
Q Consensus 400 ~~~~~fD~VllDaPCSg 416 (456)
.....||.|+.+.|..-
T Consensus 106 ~~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 106 EEVPQGSLLVANLPYHI 122 (271)
T ss_dssp GGSCTTEEEEEEECSSC
T ss_pred hhccCccEEEecCcccc
Confidence 32236899999999974
No 148
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.74 E-value=1.3e-09 Score=104.13 Aligned_cols=97 Identities=13% Similarity=0.185 Sum_probs=79.5
Q ss_pred ccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccc
Q 012783 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (456)
Q Consensus 315 ~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da 394 (456)
|..+......++..+++.++++|||+|||+|..|..+++. .++|+|+|+++.+++.++++++ +. .+++++++|+
T Consensus 11 fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~---~~~v~~id~~~~~~~~a~~~~~--~~-~~v~~~~~D~ 84 (245)
T 1yub_A 11 FLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI---SKQVTSIELDSHLFNLSSEKLK--LN-TRVTLIHQDI 84 (245)
T ss_dssp BCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH---SSEEEESSSSCSSSSSSSCTTT--TC-SEEEECCSCC
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh---CCeEEEEECCHHHHHHHHHHhc--cC-CceEEEECCh
Confidence 5566667777888888889999999999999999999987 3799999999999999888765 23 3589999999
Q ss_pred ccccccCCCCccEEEEcCCCCCCc
Q 012783 395 RTFADNSTVKCDKVLLDAPCSGLG 418 (456)
Q Consensus 395 ~~~~~~~~~~fD~VllDaPCSg~G 418 (456)
..++....++| .|++++|...++
T Consensus 85 ~~~~~~~~~~f-~vv~n~Py~~~~ 107 (245)
T 1yub_A 85 LQFQFPNKQRY-KIVGNIPYHLST 107 (245)
T ss_dssp TTTTCCCSSEE-EEEEECCSSSCH
T ss_pred hhcCcccCCCc-EEEEeCCccccH
Confidence 87653222578 899999998654
No 149
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.74 E-value=1.9e-08 Score=93.51 Aligned_cols=87 Identities=15% Similarity=0.160 Sum_probs=70.1
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc----eEEEEeccccccc
Q 012783 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS----VIRTIHADLRTFA 398 (456)
Q Consensus 323 ~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~----~V~~~~~Da~~~~ 398 (456)
..+...+...++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.+++++...++.+ .+.++++|+...+
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD 97 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC
T ss_pred HHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc
Confidence 344555556678999999999999999998753 34799999999999999999998887763 5899999986544
Q ss_pred ccCCCCccEEEEc
Q 012783 399 DNSTVKCDKVLLD 411 (456)
Q Consensus 399 ~~~~~~fD~VllD 411 (456)
.. .++||.|++.
T Consensus 98 ~~-~~~fD~V~~~ 109 (219)
T 3jwg_A 98 KR-FSGYDAATVI 109 (219)
T ss_dssp GG-GTTCSEEEEE
T ss_pred cc-cCCCCEEEEH
Confidence 32 3689999963
No 150
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.74 E-value=8.9e-09 Score=100.65 Aligned_cols=80 Identities=11% Similarity=0.118 Sum_probs=67.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--CC--------CceEEEEecccccccccC
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV--------NSVIRTIHADLRTFADNS 401 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~--g~--------~~~V~~~~~Da~~~~~~~ 401 (456)
..+.+|||+|||+|+.+..+++. +.++|+++|+++.+++.+++++ .+ ++ ..+++++.+|+..+...
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~- 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN- 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-
Confidence 45689999999999999999886 4679999999999999999998 54 33 34589999999775433
Q ss_pred CCCccEEEEcCCCC
Q 012783 402 TVKCDKVLLDAPCS 415 (456)
Q Consensus 402 ~~~fD~VllDaPCS 415 (456)
.++||+|++|+|+.
T Consensus 150 ~~~fD~Ii~d~~~~ 163 (281)
T 1mjf_A 150 NRGFDVIIADSTDP 163 (281)
T ss_dssp CCCEEEEEEECCCC
T ss_pred cCCeeEEEECCCCC
Confidence 47899999999973
No 151
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.73 E-value=5.5e-08 Score=93.63 Aligned_cols=86 Identities=15% Similarity=0.249 Sum_probs=72.7
Q ss_pred HHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCC
Q 012783 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 403 (456)
Q Consensus 324 lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~ 403 (456)
++.......++.+|||+|||+|..+..+++.. +.++|+++|+++.+++.+++++...++++ +.++.+|+..++.. .+
T Consensus 28 ~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-~~~~~~d~~~~~~~-~~ 104 (276)
T 3mgg_A 28 LLHHDTVYPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKN-VKFLQANIFSLPFE-DS 104 (276)
T ss_dssp HHHTTCCCCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEECCGGGCCSC-TT
T ss_pred HHhhcccCCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCC-cEEEEcccccCCCC-CC
Confidence 33444456789999999999999999999984 46899999999999999999999999886 89999999876533 47
Q ss_pred CccEEEEcC
Q 012783 404 KCDKVLLDA 412 (456)
Q Consensus 404 ~fD~VllDa 412 (456)
+||+|++..
T Consensus 105 ~fD~v~~~~ 113 (276)
T 3mgg_A 105 SFDHIFVCF 113 (276)
T ss_dssp CEEEEEEES
T ss_pred CeeEEEEec
Confidence 899999854
No 152
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.72 E-value=1.3e-08 Score=104.30 Aligned_cols=96 Identities=16% Similarity=0.170 Sum_probs=76.1
Q ss_pred cccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEe
Q 012783 312 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH 391 (456)
Q Consensus 312 ~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~ 391 (456)
.|.|+-...-+..++..+.+.++.+|||+|||+|+.+..+++.+++...|+|+|+++.+++.+ . .+.+++
T Consensus 18 ~g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~-~~~~~~ 87 (421)
T 2ih2_A 18 LGRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------P-WAEGIL 87 (421)
T ss_dssp ---CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------T-TEEEEE
T ss_pred CceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------C-CCcEEe
Confidence 355555556666777777766678999999999999999999875567999999999998766 2 378999
Q ss_pred cccccccccCCCCccEEEEcCCCCCCcc
Q 012783 392 ADLRTFADNSTVKCDKVLLDAPCSGLGV 419 (456)
Q Consensus 392 ~Da~~~~~~~~~~fD~VllDaPCSg~G~ 419 (456)
+|+..+.. .++||+|+++||+...+.
T Consensus 88 ~D~~~~~~--~~~fD~Ii~NPPy~~~~~ 113 (421)
T 2ih2_A 88 ADFLLWEP--GEAFDLILGNPPYGIVGE 113 (421)
T ss_dssp SCGGGCCC--SSCEEEEEECCCCCCBSC
T ss_pred CChhhcCc--cCCCCEEEECcCccCccc
Confidence 99987643 368999999999987765
No 153
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.72 E-value=4.3e-08 Score=107.58 Aligned_cols=92 Identities=17% Similarity=0.200 Sum_probs=76.9
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcC-----------------------------------------CCceE
Q 012783 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLS-----------------------------------------GQGLV 361 (456)
Q Consensus 323 ~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~-----------------------------------------~~g~V 361 (456)
..++......++..|||.|||+|++.+.+|.... ....|
T Consensus 180 a~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i 259 (703)
T 3v97_A 180 AAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHF 259 (703)
T ss_dssp HHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_pred HHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccE
Confidence 3445566778899999999999999998887531 12589
Q ss_pred EEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccC-CCCccEEEEcCCC
Q 012783 362 YAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-TVKCDKVLLDAPC 414 (456)
Q Consensus 362 ~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~-~~~fD~VllDaPC 414 (456)
+++|+++.+++.++.|+++.|+.+.|.+.++|+..+.... .+.||.|++|||.
T Consensus 260 ~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPY 313 (703)
T 3v97_A 260 YGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPY 313 (703)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCC
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCc
Confidence 9999999999999999999999988999999998864332 2379999999998
No 154
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.71 E-value=4.3e-08 Score=99.72 Aligned_cols=82 Identities=15% Similarity=0.229 Sum_probs=71.3
Q ss_pred hcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccE
Q 012783 328 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDK 407 (456)
Q Consensus 328 ~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~ 407 (456)
.+...++.+|||+|||+|..+..+++. +..+|+|+|++ .+++.++++++..|+.++|+++++|+..+... ++||+
T Consensus 58 ~~~~~~~~~VLDlGcGtG~ls~~la~~--g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~D~ 132 (376)
T 3r0q_C 58 NKHHFEGKTVLDVGTGSGILAIWSAQA--GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP--EKVDV 132 (376)
T ss_dssp TTTTTTTCEEEEESCTTTHHHHHHHHT--TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS--SCEEE
T ss_pred ccccCCCCEEEEeccCcCHHHHHHHhc--CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC--CcceE
Confidence 345678999999999999999999986 34599999999 99999999999999998899999999876533 78999
Q ss_pred EEEcCCC
Q 012783 408 VLLDAPC 414 (456)
Q Consensus 408 VllDaPC 414 (456)
|+++...
T Consensus 133 Iv~~~~~ 139 (376)
T 3r0q_C 133 IISEWMG 139 (376)
T ss_dssp EEECCCB
T ss_pred EEEcChh
Confidence 9998743
No 155
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.71 E-value=3.7e-08 Score=100.82 Aligned_cols=91 Identities=9% Similarity=0.032 Sum_probs=73.1
Q ss_pred HHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHH-------HHcCCC-ceEEEEecccc
Q 012783 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETA-------KLHQVN-SVIRTIHADLR 395 (456)
Q Consensus 324 lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~-------~r~g~~-~~V~~~~~Da~ 395 (456)
.++..+.+.+|++|||+|||+|..++.+|... +..+|+|+|+++.+++.+++++ +.+|+. .+|.++++|+.
T Consensus 164 ~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~-g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~ 242 (438)
T 3uwp_A 164 QMIDEIKMTDDDLFVDLGSGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL 242 (438)
T ss_dssp HHHHHHCCCTTCEEEEESCTTSHHHHHHHHHC-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTT
T ss_pred HHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECccc
Confidence 45567789999999999999999999999875 3457999999999999998865 345762 46999999998
Q ss_pred cccccC-CCCccEEEEcCCCC
Q 012783 396 TFADNS-TVKCDKVLLDAPCS 415 (456)
Q Consensus 396 ~~~~~~-~~~fD~VllDaPCS 415 (456)
.++... ...||+|+++.+|-
T Consensus 243 ~lp~~d~~~~aDVVf~Nn~~F 263 (438)
T 3uwp_A 243 SEEWRERIANTSVIFVNNFAF 263 (438)
T ss_dssp SHHHHHHHHTCSEEEECCTTC
T ss_pred CCccccccCCccEEEEccccc
Confidence 765321 13699999998874
No 156
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.71 E-value=1.9e-08 Score=95.53 Aligned_cols=84 Identities=12% Similarity=0.060 Sum_probs=68.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc-cCCCCccEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-NSTVKCDKVL 409 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~-~~~~~fD~Vl 409 (456)
..+|.+|||+|||+|..+.++++.. ...|+++|+|+.+++.++++.+..+.. ++++.+|+..... ...++||.|+
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~~~--~~~~~~~a~~~~~~~~~~~FD~i~ 133 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTHK--VIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCSSE--EEEEESCHHHHGGGSCTTCEEEEE
T ss_pred ccCCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCCCc--eEEEeehHHhhcccccccCCceEE
Confidence 3579999999999999999998753 358999999999999999999887753 7889999876543 3356899999
Q ss_pred EcCCCCCCc
Q 012783 410 LDAPCSGLG 418 (456)
Q Consensus 410 lDaPCSg~G 418 (456)
+|+..+...
T Consensus 134 ~D~~~~~~~ 142 (236)
T 3orh_A 134 YDTYPLSEE 142 (236)
T ss_dssp ECCCCCBGG
T ss_pred Eeeeecccc
Confidence 998765443
No 157
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.71 E-value=4.2e-08 Score=95.12 Aligned_cols=83 Identities=20% Similarity=0.197 Sum_probs=70.2
Q ss_pred HHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCC
Q 012783 325 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVK 404 (456)
Q Consensus 325 v~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~ 404 (456)
+...+...++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++...|+ + +.++++|+..++. .++
T Consensus 112 ~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~-~-~~~~~~d~~~~~~--~~~ 184 (286)
T 3m70_A 112 VVDAAKIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL-N-ISTALYDINAANI--QEN 184 (286)
T ss_dssp HHHHHHHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-C-EEEEECCGGGCCC--CSC
T ss_pred HHHHhhccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC-c-eEEEEeccccccc--cCC
Confidence 334444558899999999999999999986 45999999999999999999999998 3 8999999987654 478
Q ss_pred ccEEEEcCCC
Q 012783 405 CDKVLLDAPC 414 (456)
Q Consensus 405 fD~VllDaPC 414 (456)
||.|++..+.
T Consensus 185 fD~i~~~~~~ 194 (286)
T 3m70_A 185 YDFIVSTVVF 194 (286)
T ss_dssp EEEEEECSSG
T ss_pred ccEEEEccch
Confidence 9999997644
No 158
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.70 E-value=3.6e-08 Score=98.40 Aligned_cols=84 Identities=15% Similarity=0.175 Sum_probs=70.7
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEE
Q 012783 329 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKV 408 (456)
Q Consensus 329 l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~V 408 (456)
+...++.+|||+|||+|..+..+++. +..+|+|+|++ .+++.++++++..|+.++|+++++|+..++.. .++||+|
T Consensus 34 ~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~~D~I 109 (328)
T 1g6q_1 34 KDLFKDKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLP-FPKVDII 109 (328)
T ss_dssp HHHHTTCEEEEETCTTSHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCS-SSCEEEE
T ss_pred HhhcCCCEEEEecCccHHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCC-CCcccEE
Confidence 34457899999999999999998875 45699999999 69999999999999988899999999876432 3689999
Q ss_pred EEcCCCCC
Q 012783 409 LLDAPCSG 416 (456)
Q Consensus 409 llDaPCSg 416 (456)
+++.+..+
T Consensus 110 vs~~~~~~ 117 (328)
T 1g6q_1 110 ISEWMGYF 117 (328)
T ss_dssp EECCCBTT
T ss_pred EEeCchhh
Confidence 99987544
No 159
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.69 E-value=5.7e-08 Score=94.17 Aligned_cols=77 Identities=18% Similarity=0.234 Sum_probs=67.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEcC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 412 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllDa 412 (456)
++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++++..|+..++.++++|+..++....++||+|++..
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 144 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHA 144 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEES
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECc
Confidence 3789999999999999999986 4699999999999999999999999866699999999887744457999999853
No 160
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.69 E-value=2.5e-08 Score=94.12 Aligned_cols=77 Identities=13% Similarity=0.119 Sum_probs=64.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc-cCCCCccEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-NSTVKCDKVL 409 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~-~~~~~fD~Vl 409 (456)
+.++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++++..+ . ++.++++|+..+.. ...++||.|+
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~-~-~v~~~~~d~~~~~~~~~~~~fD~V~ 133 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPRQT-H-KVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTS--CEEEEEEEECCHHHHHHHHHHGGGCS-S-EEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhc--CCCeEEEEcCCHHHHHHHHHHHHhcC-C-CeEEEecCHHHhhcccCCCceEEEE
Confidence 567899999999999999999764 23489999999999999999988777 3 48999999987621 2346899999
Q ss_pred Ec
Q 012783 410 LD 411 (456)
Q Consensus 410 lD 411 (456)
+|
T Consensus 134 ~d 135 (236)
T 1zx0_A 134 YD 135 (236)
T ss_dssp EC
T ss_pred EC
Confidence 97
No 161
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.69 E-value=5.1e-08 Score=98.15 Aligned_cols=81 Identities=14% Similarity=0.154 Sum_probs=70.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
..++.+|||+|||+|..+..+++. +..+|+|+|++ ++++.++++++..|+.++|+++++|+..++.. .++||+|++
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~Iis 139 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELP-VEKVDIIIS 139 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SSCEEEEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCC-CCceEEEEE
Confidence 457899999999999999999986 45799999999 59999999999999998899999999887432 378999999
Q ss_pred cCCCC
Q 012783 411 DAPCS 415 (456)
Q Consensus 411 DaPCS 415 (456)
+.+..
T Consensus 140 ~~~~~ 144 (349)
T 3q7e_A 140 EWMGY 144 (349)
T ss_dssp CCCBB
T ss_pred ccccc
Confidence 87543
No 162
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.68 E-value=7.2e-08 Score=96.77 Aligned_cols=84 Identities=14% Similarity=0.199 Sum_probs=70.4
Q ss_pred HHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCC
Q 012783 325 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVK 404 (456)
Q Consensus 325 v~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~ 404 (456)
+...+...++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.++++++..|+.++++++++|+..++.. .++
T Consensus 56 i~~~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~ 131 (340)
T 2fyt_A 56 IYQNPHIFKDKVVLDVGCGTGILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLP-VEK 131 (340)
T ss_dssp HHHCGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCS-CSC
T ss_pred HHhhhhhcCCCEEEEeeccCcHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCC-CCc
Confidence 344455678999999999999999999886 356999999996 9999999999999966699999999876432 368
Q ss_pred ccEEEEcC
Q 012783 405 CDKVLLDA 412 (456)
Q Consensus 405 fD~VllDa 412 (456)
||+|+++.
T Consensus 132 ~D~Ivs~~ 139 (340)
T 2fyt_A 132 VDVIISEW 139 (340)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 99999986
No 163
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.68 E-value=1.7e-08 Score=93.48 Aligned_cols=79 Identities=8% Similarity=0.078 Sum_probs=63.0
Q ss_pred hcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc------------CCCceEEEEecccc
Q 012783 328 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH------------QVNSVIRTIHADLR 395 (456)
Q Consensus 328 ~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~------------g~~~~V~~~~~Da~ 395 (456)
.+.+.++.+|||+|||+|..+..+++. ..+|+|+|+|+.+++.++++.... +.. .++++++|+.
T Consensus 17 ~l~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~d~~ 92 (203)
T 1pjz_A 17 SLNVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAP-GIEIWCGDFF 92 (203)
T ss_dssp HHCCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECS-SSEEEEECCS
T ss_pred hcccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCC-ccEEEECccc
Confidence 345678899999999999999999986 358999999999999999876431 123 3889999998
Q ss_pred cccccCCCCccEEEE
Q 012783 396 TFADNSTVKCDKVLL 410 (456)
Q Consensus 396 ~~~~~~~~~fD~Vll 410 (456)
.++....++||.|++
T Consensus 93 ~l~~~~~~~fD~v~~ 107 (203)
T 1pjz_A 93 ALTARDIGHCAAFYD 107 (203)
T ss_dssp SSTHHHHHSEEEEEE
T ss_pred cCCcccCCCEEEEEE
Confidence 875431258999986
No 164
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.67 E-value=5.6e-08 Score=103.53 Aligned_cols=105 Identities=17% Similarity=0.176 Sum_probs=83.9
Q ss_pred ccccccchHHHHHHHhcC----CCCCCeEEEEcCCCchHHHHHHHHcC--CCceEEEEeCCHHHHHHHHHHHHHcCCC-c
Q 012783 313 GLCAVQDESAGLVVAVVD----PQPGQSIVDCCAAPGGKTLYMASCLS--GQGLVYAIDINKGRLRILNETAKLHQVN-S 385 (456)
Q Consensus 313 G~~~vQd~ss~lv~~~l~----~~~g~~VLDlcAGpGgkt~~la~~~~--~~g~V~AvDis~~rl~~l~~n~~r~g~~-~ 385 (456)
|.|+--..-+.+++..+. +.++.+|+|.|||+|++.+.++..+. +...++|+|+++..+..++.|+...|+. .
T Consensus 197 G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~ 276 (542)
T 3lkd_A 197 GEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIE 276 (542)
T ss_dssp SSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGG
T ss_pred CeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcC
Confidence 555444445666777766 67889999999999999999998874 3568999999999999999999999985 2
Q ss_pred eEEEEecccccc--cccCCCCccEEEEcCCCCCC
Q 012783 386 VIRTIHADLRTF--ADNSTVKCDKVLLDAPCSGL 417 (456)
Q Consensus 386 ~V~~~~~Da~~~--~~~~~~~fD~VllDaPCSg~ 417 (456)
.+.+.++|.... +.....+||+|+.+||.++.
T Consensus 277 ~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~ 310 (542)
T 3lkd_A 277 NQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAK 310 (542)
T ss_dssp GEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCC
T ss_pred ccceEecceecccccccccccccEEEecCCcCCc
Confidence 478899998754 33334689999999999853
No 165
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.67 E-value=2.9e-08 Score=91.90 Aligned_cols=84 Identities=14% Similarity=0.100 Sum_probs=69.8
Q ss_pred hHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc
Q 012783 320 ESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (456)
Q Consensus 320 ~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~ 399 (456)
.-..++...+...++.+|||+|||+|..+..+++. ..+|+++|+++.+++.+++++...+ .+.++++|+..++
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~- 110 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFS- 110 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCC-
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCC-
Confidence 33445566677788899999999999999999876 3689999999999999999887654 3899999998876
Q ss_pred cCCCCccEEEEc
Q 012783 400 NSTVKCDKVLLD 411 (456)
Q Consensus 400 ~~~~~fD~VllD 411 (456)
..++||.|++.
T Consensus 111 -~~~~fD~v~~~ 121 (216)
T 3ofk_A 111 -TAELFDLIVVA 121 (216)
T ss_dssp -CSCCEEEEEEE
T ss_pred -CCCCccEEEEc
Confidence 34789999984
No 166
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.67 E-value=3.5e-08 Score=90.91 Aligned_cols=74 Identities=18% Similarity=0.091 Sum_probs=59.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
.+.++|||+|||+|..++.++...+ ..+|+|+|+|+.+++.+++|+.++|+.+++.+ .|.... ...++||+|+.
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p-~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~--~~~~~~DvVLa 121 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENE-KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD--VYKGTYDVVFL 121 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSC-CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH--HTTSEEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc--CCCCCcChhhH
Confidence 4578999999999999999987644 56999999999999999999999999865665 555332 22367888775
No 167
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.67 E-value=6.5e-08 Score=93.71 Aligned_cols=80 Identities=18% Similarity=0.143 Sum_probs=68.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
+.++.+|||+|||+|..+..++.. +.+.|+++|+++.+++.+++++...+...++.++++|+...+....++||+|++
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISS 139 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEE
Confidence 467899999999999999998876 356999999999999999999999888666999999998764323468999998
Q ss_pred cC
Q 012783 411 DA 412 (456)
Q Consensus 411 Da 412 (456)
..
T Consensus 140 ~~ 141 (298)
T 1ri5_A 140 QF 141 (298)
T ss_dssp ES
T ss_pred Cc
Confidence 63
No 168
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.66 E-value=2.1e-08 Score=98.77 Aligned_cols=81 Identities=10% Similarity=0.151 Sum_probs=64.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcC---C-CceEEEEecccccccccCCCCccEE
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ---V-NSVIRTIHADLRTFADNSTVKCDKV 408 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g---~-~~~V~~~~~Da~~~~~~~~~~fD~V 408 (456)
++.+|||+|||+|+.+..+++. .+..+|+++|+++.+++.+++++...+ + ..+++++.+|+..+.....++||+|
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~-~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTC-TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 4689999999999999999875 346799999999999999999987653 1 2358999999988755445789999
Q ss_pred EEcCCC
Q 012783 409 LLDAPC 414 (456)
Q Consensus 409 llDaPC 414 (456)
++|+|.
T Consensus 162 i~D~~~ 167 (294)
T 3adn_A 162 ISDCTD 167 (294)
T ss_dssp EECC--
T ss_pred EECCCC
Confidence 999885
No 169
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.66 E-value=9.2e-08 Score=96.20 Aligned_cols=86 Identities=12% Similarity=0.172 Sum_probs=71.8
Q ss_pred HHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCC
Q 012783 325 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVK 404 (456)
Q Consensus 325 v~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~ 404 (456)
+...+...++.+|||+|||+|..+..+++. +.++|+|+|+++ +++.++++++..|+.++|+++++|+..++. +++
T Consensus 42 i~~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~--~~~ 116 (348)
T 2y1w_A 42 ILQNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL--PEQ 116 (348)
T ss_dssp HHHTGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC--SSC
T ss_pred HHhccccCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC--CCc
Confidence 344455668999999999999999999885 456999999996 889999999999997679999999987642 368
Q ss_pred ccEEEEcCCCC
Q 012783 405 CDKVLLDAPCS 415 (456)
Q Consensus 405 fD~VllDaPCS 415 (456)
||+|+++.+..
T Consensus 117 ~D~Ivs~~~~~ 127 (348)
T 2y1w_A 117 VDIIISEPMGY 127 (348)
T ss_dssp EEEEEECCCBT
T ss_pred eeEEEEeCchh
Confidence 99999987744
No 170
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.66 E-value=6.4e-08 Score=92.06 Aligned_cols=81 Identities=11% Similarity=0.172 Sum_probs=65.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHH------cCCCceEEEEeccccc-ccc-cCC
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL------HQVNSVIRTIHADLRT-FAD-NST 402 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r------~g~~~~V~~~~~Da~~-~~~-~~~ 402 (456)
..++.+|||+|||+|..+..+|... +...|+|+|+++.+++.++++++. .+..| |.++++|+.. ++. ...
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~n-v~~~~~d~~~~l~~~~~~ 121 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQN-IACLRSNAMKHLPNFFYK 121 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTT-EEEEECCTTTCHHHHCCT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCe-EEEEECcHHHhhhhhCCC
Confidence 3467899999999999999999874 467999999999999999998765 45666 8999999986 432 234
Q ss_pred CCccEEEEcCC
Q 012783 403 VKCDKVLLDAP 413 (456)
Q Consensus 403 ~~fD~VllDaP 413 (456)
+.||.|++.-|
T Consensus 122 ~~~D~v~~~~~ 132 (235)
T 3ckk_A 122 GQLTKMFFLFP 132 (235)
T ss_dssp TCEEEEEEESC
T ss_pred cCeeEEEEeCC
Confidence 68999998654
No 171
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.65 E-value=3.4e-08 Score=97.72 Aligned_cols=83 Identities=11% Similarity=0.055 Sum_probs=67.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHH--cCC-CceEEEEecccccccccCCCCccE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL--HQV-NSVIRTIHADLRTFADNSTVKCDK 407 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r--~g~-~~~V~~~~~Da~~~~~~~~~~fD~ 407 (456)
...+.+|||+|||+|+.+..+++. .+..+|+++|+++.+++.+++++.. .++ ..+++++.+|+..+.....++||+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~ 171 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKH-PSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDV 171 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceE
Confidence 345689999999999999999876 3457999999999999999999876 344 345899999998754334478999
Q ss_pred EEEcCCC
Q 012783 408 VLLDAPC 414 (456)
Q Consensus 408 VllDaPC 414 (456)
|++|+|.
T Consensus 172 Ii~d~~~ 178 (304)
T 2o07_A 172 IITDSSD 178 (304)
T ss_dssp EEEECC-
T ss_pred EEECCCC
Confidence 9999985
No 172
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.65 E-value=1.7e-08 Score=100.37 Aligned_cols=89 Identities=22% Similarity=0.294 Sum_probs=74.2
Q ss_pred HHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccC--
Q 012783 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-- 401 (456)
Q Consensus 324 lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~-- 401 (456)
-++..|.++||+.++|+++|.||.|..+++.+++.|+|+|+|.++.+++.++ + +. .+++++++++..++....
T Consensus 48 Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-r---L~-~~Rv~lv~~nF~~l~~~L~~ 122 (347)
T 3tka_A 48 EAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-T---ID-DPRFSIIHGPFSALGEYVAE 122 (347)
T ss_dssp HHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-T---CC-CTTEEEEESCGGGHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-h---hc-CCcEEEEeCCHHHHHHHHHh
Confidence 3567788999999999999999999999999888999999999999999883 3 32 356999999987764321
Q ss_pred ---CCCccEEEEcCCCCCC
Q 012783 402 ---TVKCDKVLLDAPCSGL 417 (456)
Q Consensus 402 ---~~~fD~VllDaPCSg~ 417 (456)
.+++|.||+|-.||+.
T Consensus 123 ~g~~~~vDgILfDLGVSS~ 141 (347)
T 3tka_A 123 RDLIGKIDGILLDLGVSSP 141 (347)
T ss_dssp TTCTTCEEEEEEECSCCHH
T ss_pred cCCCCcccEEEECCccCHH
Confidence 1369999999999964
No 173
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.65 E-value=3.7e-08 Score=95.99 Aligned_cols=81 Identities=10% Similarity=0.066 Sum_probs=67.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--CC-CceEEEEecccccccccCCCCccEEE
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV-NSVIRTIHADLRTFADNSTVKCDKVL 409 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~--g~-~~~V~~~~~Da~~~~~~~~~~fD~Vl 409 (456)
.+.+|||+|||.|+.+..+++. .+..+|+++|+++..++.+++++..+ ++ ..+++++.+|+..+.....++||+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKH-PSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTC-TTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhC-CCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 4689999999999999999875 34579999999999999999998653 33 24599999999876443347899999
Q ss_pred EcCCC
Q 012783 410 LDAPC 414 (456)
Q Consensus 410 lDaPC 414 (456)
+|+|.
T Consensus 154 ~d~~~ 158 (275)
T 1iy9_A 154 VDSTE 158 (275)
T ss_dssp ESCSS
T ss_pred ECCCC
Confidence 99986
No 174
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.65 E-value=2.6e-08 Score=96.87 Aligned_cols=85 Identities=16% Similarity=0.255 Sum_probs=72.3
Q ss_pred HHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---
Q 012783 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--- 400 (456)
Q Consensus 324 lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~--- 400 (456)
-++..|++++|+.++|++||.||.|..+++. .|+|+|+|.++..++.+++ ++. +++++++++..++...
T Consensus 13 e~le~L~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~ 84 (285)
T 1wg8_A 13 EALDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAA 84 (285)
T ss_dssp HHHHHHTCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHH
Confidence 4567788999999999999999999999997 5899999999999999988 643 3589999999877432
Q ss_pred -CCCCccEEEEcCCCCC
Q 012783 401 -STVKCDKVLLDAPCSG 416 (456)
Q Consensus 401 -~~~~fD~VllDaPCSg 416 (456)
...+||.|++|.++|.
T Consensus 85 ~g~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 85 LGVERVDGILADLGVSS 101 (285)
T ss_dssp TTCSCEEEEEEECSCCH
T ss_pred cCCCCcCEEEeCCcccc
Confidence 1247999999999987
No 175
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.64 E-value=3.9e-08 Score=86.88 Aligned_cols=77 Identities=27% Similarity=0.369 Sum_probs=62.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc-------cCCC
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-------NSTV 403 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~-------~~~~ 403 (456)
+.++.+|||+|||+|..+..+++.+++.++|+++|+++ ++.. .+ +.++.+|+...+. ...+
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~-~~~~~~d~~~~~~~~~~~~~~~~~ 87 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VG-VDFLQGDFRDELVMKALLERVGDS 87 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TT-EEEEESCTTSHHHHHHHHHHHTTC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------Cc-EEEEEcccccchhhhhhhccCCCC
Confidence 67899999999999999999999876568999999999 6432 33 7889999977531 2236
Q ss_pred CccEEEEcCCCCCCcc
Q 012783 404 KCDKVLLDAPCSGLGV 419 (456)
Q Consensus 404 ~fD~VllDaPCSg~G~ 419 (456)
+||.|++|+|+...|.
T Consensus 88 ~~D~i~~~~~~~~~~~ 103 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGT 103 (180)
T ss_dssp CEEEEEECCCCCCCSC
T ss_pred ceeEEEECCCccccCC
Confidence 8999999999987665
No 176
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.64 E-value=5.2e-08 Score=92.69 Aligned_cols=83 Identities=17% Similarity=0.177 Sum_probs=68.6
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCC
Q 012783 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402 (456)
Q Consensus 323 ~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~ 402 (456)
..+...+.+.++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++++... . .+.++++|+..++. ..
T Consensus 45 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~-~~~~~~~d~~~~~~-~~ 118 (266)
T 3ujc_A 45 KKILSDIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN--N-KIIFEANDILTKEF-PE 118 (266)
T ss_dssp HHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC--T-TEEEEECCTTTCCC-CT
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC--C-CeEEEECccccCCC-CC
Confidence 344555677889999999999999999999976 469999999999999999886654 3 48999999987643 24
Q ss_pred CCccEEEEc
Q 012783 403 VKCDKVLLD 411 (456)
Q Consensus 403 ~~fD~VllD 411 (456)
++||+|++.
T Consensus 119 ~~fD~v~~~ 127 (266)
T 3ujc_A 119 NNFDLIYSR 127 (266)
T ss_dssp TCEEEEEEE
T ss_pred CcEEEEeHH
Confidence 789999984
No 177
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.64 E-value=8.7e-08 Score=89.81 Aligned_cols=83 Identities=17% Similarity=0.219 Sum_probs=69.0
Q ss_pred HHHHhcC-CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCC
Q 012783 324 LVVAVVD-PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402 (456)
Q Consensus 324 lv~~~l~-~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~ 402 (456)
.+...+. ..++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.+++++...+ .+.++++|+..++..
T Consensus 34 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~-- 107 (234)
T 3dtn_A 34 VSVSIASVDTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFE-- 107 (234)
T ss_dssp HHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCC--
T ss_pred HHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCC--
Confidence 4444444 5678999999999999999999986 46799999999999999999887665 389999999877543
Q ss_pred CCccEEEEcC
Q 012783 403 VKCDKVLLDA 412 (456)
Q Consensus 403 ~~fD~VllDa 412 (456)
++||.|++..
T Consensus 108 ~~fD~v~~~~ 117 (234)
T 3dtn_A 108 EKYDMVVSAL 117 (234)
T ss_dssp SCEEEEEEES
T ss_pred CCceEEEEeC
Confidence 6899999864
No 178
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.63 E-value=1.2e-07 Score=90.06 Aligned_cols=87 Identities=21% Similarity=0.213 Sum_probs=71.1
Q ss_pred ccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccc
Q 012783 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 396 (456)
Q Consensus 317 vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~ 396 (456)
.|......+...+.+.++.+|||+|||+|..+..++... +.++|+++|+++.+++.++++ ..+ +.++.+|+..
T Consensus 17 ~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~-----~~~-~~~~~~d~~~ 89 (259)
T 2p35_A 17 ERTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADR-----LPN-TNFGKADLAT 89 (259)
T ss_dssp GGGHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHH-----STT-SEEEECCTTT
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh-----CCC-cEEEECChhh
Confidence 455555566667777889999999999999999999986 357999999999999999887 233 7899999987
Q ss_pred ccccCCCCccEEEEcC
Q 012783 397 FADNSTVKCDKVLLDA 412 (456)
Q Consensus 397 ~~~~~~~~fD~VllDa 412 (456)
++ ..++||.|++..
T Consensus 90 ~~--~~~~fD~v~~~~ 103 (259)
T 2p35_A 90 WK--PAQKADLLYANA 103 (259)
T ss_dssp CC--CSSCEEEEEEES
T ss_pred cC--ccCCcCEEEEeC
Confidence 76 347899999854
No 179
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.63 E-value=7.6e-08 Score=88.04 Aligned_cols=76 Identities=17% Similarity=0.177 Sum_probs=59.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc----------
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------- 399 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---------- 399 (456)
+.++.+|||+|||||+.+..+++.+++ .++|+|+|+++.. ...+ +.++++|+.....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~-v~~~~~d~~~~~~~~~~~~~~i~ 87 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPN-VYFIQGEIGKDNMNNIKNINYID 87 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTT-CEEEECCTTTTSSCCC-------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCC-ceEEEccccchhhhhhccccccc
Confidence 567899999999999999999998753 6899999999831 2344 7889999876540
Q ss_pred --------------cCCCCccEEEEcCCCCCCc
Q 012783 400 --------------NSTVKCDKVLLDAPCSGLG 418 (456)
Q Consensus 400 --------------~~~~~fD~VllDaPCSg~G 418 (456)
....+||.|++|.++...|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g 120 (201)
T 2plw_A 88 NMNNNSVDYKLKEILQDKKIDIILSDAAVPCIG 120 (201)
T ss_dssp ----CHHHHHHHHHHTTCCEEEEEECCCCCCCS
T ss_pred cccchhhHHHHHhhcCCCcccEEEeCCCcCCCC
Confidence 1235899999998765444
No 180
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.63 E-value=3.5e-08 Score=105.17 Aligned_cols=105 Identities=16% Similarity=0.202 Sum_probs=84.4
Q ss_pred cccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCC--------------CceEEEEeCCHHHHHHHHHH
Q 012783 312 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG--------------QGLVYAIDINKGRLRILNET 377 (456)
Q Consensus 312 ~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~--------------~g~V~AvDis~~rl~~l~~n 377 (456)
.|.|+--..-+.+++..+.+.++ +|||.|||+|++.+.++..+.. ...|+|+|+++..+..++.|
T Consensus 224 ~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~N 302 (544)
T 3khk_A 224 GGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMN 302 (544)
T ss_dssp STTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHH
T ss_pred CCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHH
Confidence 46666666677788889998877 9999999999998887765421 35899999999999999999
Q ss_pred HHHcCCCceEEEEecccccccccCCCCccEEEEcCCCCCC
Q 012783 378 AKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGL 417 (456)
Q Consensus 378 ~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllDaPCSg~ 417 (456)
+...|+...+.+.++|....+.....+||+|+.+||.++.
T Consensus 303 l~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~ 342 (544)
T 3khk_A 303 MVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMK 342 (544)
T ss_dssp HHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCC
T ss_pred HHHhCCCcccceeccchhcCcccccccccEEEECCCcCCc
Confidence 9999987655558899765443334689999999999864
No 181
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.62 E-value=1e-07 Score=91.50 Aligned_cols=77 Identities=18% Similarity=0.200 Sum_probs=65.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
..++.+|||+|||+|..+..++.. + .+|+++|+++.+++.+++|++..++. +.+.++|+..... .++||+|++
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-g--~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~--~~~fD~Vv~ 190 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-G--GKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALP--FGPFDLLVA 190 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T--CEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGG--GCCEEEEEE
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-C--CeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCc--CCCCCEEEE
Confidence 467899999999999999988875 2 29999999999999999999999986 7889999876321 258999999
Q ss_pred cCCC
Q 012783 411 DAPC 414 (456)
Q Consensus 411 DaPC 414 (456)
+.+.
T Consensus 191 n~~~ 194 (254)
T 2nxc_A 191 NLYA 194 (254)
T ss_dssp ECCH
T ss_pred CCcH
Confidence 8654
No 182
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.61 E-value=1.6e-07 Score=87.27 Aligned_cols=76 Identities=20% Similarity=0.230 Sum_probs=64.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEc
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllD 411 (456)
.++.+|||+|||+|..+..++... .+|+++|+++.+++.++++++..+ . .+.++++|+..++. ..++||.|++.
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~-~-~~~~~~~d~~~~~~-~~~~~D~v~~~ 110 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE-S-NVEFIVGDARKLSF-EDKTFDYVIFI 110 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT-C-CCEEEECCTTSCCS-CTTCEEEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC-C-CceEEECchhcCCC-CCCcEEEEEEc
Confidence 358899999999999999998862 389999999999999999998887 3 38899999987642 23689999998
Q ss_pred CC
Q 012783 412 AP 413 (456)
Q Consensus 412 aP 413 (456)
.+
T Consensus 111 ~~ 112 (227)
T 1ve3_A 111 DS 112 (227)
T ss_dssp SC
T ss_pred Cc
Confidence 66
No 183
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.61 E-value=1.1e-07 Score=92.85 Aligned_cols=93 Identities=16% Similarity=0.215 Sum_probs=71.9
Q ss_pred cchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccc
Q 012783 318 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 396 (456)
Q Consensus 318 Qd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~ 396 (456)
.......++..+++.++++|||+|||+|..|..+++.... .++|+|+|+++.+++.++++. . .+++++++|+..
T Consensus 27 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~-~~v~~i~~D~~~ 101 (279)
T 3uzu_A 27 DHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----G-ELLELHAGDALT 101 (279)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----G-GGEEEEESCGGG
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----C-CCcEEEECChhc
Confidence 3344456677888899999999999999999999998543 356999999999999999983 2 348999999987
Q ss_pred ccccC--C-C--CccEEEEcCCCC
Q 012783 397 FADNS--T-V--KCDKVLLDAPCS 415 (456)
Q Consensus 397 ~~~~~--~-~--~fD~VllDaPCS 415 (456)
++... . . ..+.|+.+.|..
T Consensus 102 ~~~~~~~~~~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 102 FDFGSIARPGDEPSLRIIGNLPYN 125 (279)
T ss_dssp CCGGGGSCSSSSCCEEEEEECCHH
T ss_pred CChhHhcccccCCceEEEEccCcc
Confidence 64321 1 1 235788888876
No 184
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.61 E-value=9.8e-08 Score=100.28 Aligned_cols=82 Identities=12% Similarity=0.176 Sum_probs=69.6
Q ss_pred HhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCcc
Q 012783 327 AVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCD 406 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD 406 (456)
..+...++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.++++++..|+.++|+++++|+..++. +++||
T Consensus 152 ~~l~~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~--~~~fD 226 (480)
T 3b3j_A 152 QNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL--PEQVD 226 (480)
T ss_dssp HTGGGTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC--SSCEE
T ss_pred HhhhhcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCcc--CCCeE
Confidence 3444567899999999999999988874 457999999998 999999999999997679999999987532 35899
Q ss_pred EEEEcCC
Q 012783 407 KVLLDAP 413 (456)
Q Consensus 407 ~VllDaP 413 (456)
+|++++|
T Consensus 227 ~Ivs~~~ 233 (480)
T 3b3j_A 227 IIISEPM 233 (480)
T ss_dssp EEECCCC
T ss_pred EEEEeCc
Confidence 9999877
No 185
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.60 E-value=3.9e-08 Score=92.90 Aligned_cols=81 Identities=12% Similarity=0.067 Sum_probs=65.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCC-HHHHHHH---HHHHHHcCCCceEEEEecccccccccCCCCcc
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDIN-KGRLRIL---NETAKLHQVNSVIRTIHADLRTFADNSTVKCD 406 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis-~~rl~~l---~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD 406 (456)
.+++++|||+|||+|..+..++.. .+.+.|+++|+| +.+++.+ ++++++.|+.+ +.++++|+..++......+|
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~-~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~-v~~~~~d~~~l~~~~~d~v~ 99 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAIN-DQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSN-VVFVIAAAESLPFELKNIAD 99 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHT-CTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSS-EEEECCBTTBCCGGGTTCEE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCC-eEEEEcCHHHhhhhccCeEE
Confidence 357899999999999999999875 356899999999 6666665 88888889886 89999999888643335678
Q ss_pred EEEEcCC
Q 012783 407 KVLLDAP 413 (456)
Q Consensus 407 ~VllDaP 413 (456)
.|.+..|
T Consensus 100 ~i~~~~~ 106 (225)
T 3p2e_A 100 SISILFP 106 (225)
T ss_dssp EEEEESC
T ss_pred EEEEeCC
Confidence 8877765
No 186
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.59 E-value=8.7e-08 Score=87.71 Aligned_cols=74 Identities=20% Similarity=0.192 Sum_probs=62.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
..++ +|||+|||+|..+..++.. ..+|+++|+++.+++.+++++...+. + +.++++|+..++. ..+.||.|++
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~-~-~~~~~~d~~~~~~-~~~~fD~v~~ 100 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV-K-ITTVQSNLADFDI-VADAWEGIVS 100 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC-C-EEEECCBTTTBSC-CTTTCSEEEE
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC-c-eEEEEcChhhcCC-CcCCccEEEE
Confidence 3456 9999999999999998875 46999999999999999999998887 3 8899999987652 2368999997
Q ss_pred c
Q 012783 411 D 411 (456)
Q Consensus 411 D 411 (456)
.
T Consensus 101 ~ 101 (202)
T 2kw5_A 101 I 101 (202)
T ss_dssp E
T ss_pred E
Confidence 3
No 187
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.59 E-value=1.1e-07 Score=96.66 Aligned_cols=82 Identities=16% Similarity=0.285 Sum_probs=68.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc-----C-CC-ceEEEEeccccccc-----
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-----Q-VN-SVIRTIHADLRTFA----- 398 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~-----g-~~-~~V~~~~~Da~~~~----- 398 (456)
+.++.+|||+|||+|..+..++...++.++|+++|+++.+++.++++++.. | .. .++.++++|+..+.
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 557899999999999999999998866789999999999999999998866 4 21 24899999998762
Q ss_pred ccCCCCccEEEEcC
Q 012783 399 DNSTVKCDKVLLDA 412 (456)
Q Consensus 399 ~~~~~~fD~VllDa 412 (456)
....++||+|++..
T Consensus 161 ~~~~~~fD~V~~~~ 174 (383)
T 4fsd_A 161 GVPDSSVDIVISNC 174 (383)
T ss_dssp CCCTTCEEEEEEES
T ss_pred CCCCCCEEEEEEcc
Confidence 22346899999864
No 188
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.59 E-value=1.7e-07 Score=96.94 Aligned_cols=89 Identities=15% Similarity=0.145 Sum_probs=69.8
Q ss_pred HHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHH-------HHHHHHcCCC-ceEEEEecccc
Q 012783 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRIL-------NETAKLHQVN-SVIRTIHADLR 395 (456)
Q Consensus 324 lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l-------~~n~~r~g~~-~~V~~~~~Da~ 395 (456)
.+...+.+.+|++|||+|||+|..++.+|...+ ..+|+++|+++.+++.+ +++++.+|+. .+|.++++|..
T Consensus 233 ~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~ 311 (433)
T 1u2z_A 233 DVYQQCQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF 311 (433)
T ss_dssp HHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS
T ss_pred HHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcc
Confidence 344567888999999999999999999999763 46899999999999888 9999999943 34889888654
Q ss_pred c----ccccCCCCccEEEEcCCC
Q 012783 396 T----FADNSTVKCDKVLLDAPC 414 (456)
Q Consensus 396 ~----~~~~~~~~fD~VllDaPC 414 (456)
. +... .+.||+|++...+
T Consensus 312 ~~~~~~~~~-~~~FDvIvvn~~l 333 (433)
T 1u2z_A 312 VDNNRVAEL-IPQCDVILVNNFL 333 (433)
T ss_dssp TTCHHHHHH-GGGCSEEEECCTT
T ss_pred ccccccccc-cCCCCEEEEeCcc
Confidence 2 1111 2579999987544
No 189
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.59 E-value=7.9e-08 Score=92.41 Aligned_cols=95 Identities=17% Similarity=0.189 Sum_probs=73.1
Q ss_pred ccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccc
Q 012783 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (456)
Q Consensus 315 ~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da 394 (456)
|..+..-...++..+++.++++|||+|||+|..|..+++. +.++|+|+|+|+.+++.++++ +.. +++++++|+
T Consensus 13 fl~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~----~~~-~v~~i~~D~ 85 (249)
T 3ftd_A 13 LLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH--PLKKLYVIELDREMVENLKSI----GDE-RLEVINEDA 85 (249)
T ss_dssp CEECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS----CCT-TEEEECSCT
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc----cCC-CeEEEEcch
Confidence 3344445556777888889999999999999999999875 357999999999999999887 233 389999999
Q ss_pred ccccccCCCCccEEEEcCCCCC
Q 012783 395 RTFADNSTVKCDKVLLDAPCSG 416 (456)
Q Consensus 395 ~~~~~~~~~~fD~VllDaPCSg 416 (456)
..++.........|+.++|..-
T Consensus 86 ~~~~~~~~~~~~~vv~NlPy~i 107 (249)
T 3ftd_A 86 SKFPFCSLGKELKVVGNLPYNV 107 (249)
T ss_dssp TTCCGGGSCSSEEEEEECCTTT
T ss_pred hhCChhHccCCcEEEEECchhc
Confidence 8764322111348999999963
No 190
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.58 E-value=9.3e-08 Score=97.30 Aligned_cols=76 Identities=16% Similarity=0.304 Sum_probs=65.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEc
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllD 411 (456)
.+|.+|||+|||+|..++.+|+. +..+|+|||.++ +++.++++++.+|+.++|+++++|+..+.. +++||+|+++
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~a--GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l--pe~~DvivsE 156 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQA--GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL--PEQVDAIVSE 156 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC--SSCEEEEECC
T ss_pred cCCCEEEEeCCCccHHHHHHHHh--CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC--CccccEEEee
Confidence 36899999999999999877764 456899999995 889999999999999999999999987643 4689999986
Q ss_pred C
Q 012783 412 A 412 (456)
Q Consensus 412 a 412 (456)
.
T Consensus 157 ~ 157 (376)
T 4hc4_A 157 W 157 (376)
T ss_dssp C
T ss_pred c
Confidence 4
No 191
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.58 E-value=1.4e-07 Score=90.77 Aligned_cols=78 Identities=13% Similarity=0.094 Sum_probs=61.6
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHH----------cC------CCceEEEEecc
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL----------HQ------VNSVIRTIHAD 393 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r----------~g------~~~~V~~~~~D 393 (456)
.+.++.+|||+|||+|..+..+|+. ...|+|+|+|+.+++.++++... .+ ....|+++++|
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D 141 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS 141 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc
Confidence 4567899999999999999999985 35899999999999998765431 00 11248999999
Q ss_pred cccccccCCCCccEEEE
Q 012783 394 LRTFADNSTVKCDKVLL 410 (456)
Q Consensus 394 a~~~~~~~~~~fD~Vll 410 (456)
+..++....++||.|++
T Consensus 142 ~~~l~~~~~~~FD~V~~ 158 (252)
T 2gb4_A 142 IFDLPRANIGKFDRIWD 158 (252)
T ss_dssp TTTGGGGCCCCEEEEEE
T ss_pred cccCCcccCCCEEEEEE
Confidence 99876543368999985
No 192
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.58 E-value=2.4e-07 Score=85.35 Aligned_cols=76 Identities=13% Similarity=0.141 Sum_probs=63.1
Q ss_pred HHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCc
Q 012783 326 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 405 (456)
Q Consensus 326 ~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~f 405 (456)
..+....++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++ .+..+ +.++++|+..+ ...++|
T Consensus 39 ~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~~~-~~~~~~d~~~~--~~~~~~ 108 (218)
T 3ou2_A 39 ERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGLDN-VEFRQQDLFDW--TPDRQW 108 (218)
T ss_dssp HHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCCTT-EEEEECCTTSC--CCSSCE
T ss_pred HHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCCCC-eEEEecccccC--CCCCce
Confidence 33334677889999999999999999987 4699999999999999887 56655 89999999876 234789
Q ss_pred cEEEEc
Q 012783 406 DKVLLD 411 (456)
Q Consensus 406 D~VllD 411 (456)
|+|++.
T Consensus 109 D~v~~~ 114 (218)
T 3ou2_A 109 DAVFFA 114 (218)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 999984
No 193
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.58 E-value=8.9e-09 Score=102.01 Aligned_cols=78 Identities=21% Similarity=0.229 Sum_probs=58.0
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeC----CHHHHHHHHHHHHHcCCCceEEEEec-ccccccccCCCCc
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDI----NKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVKC 405 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDi----s~~rl~~l~~n~~r~g~~~~V~~~~~-Da~~~~~~~~~~f 405 (456)
+.+|.+|||+|||||++|..+++. ++|+++|+ +..++..+ ..+..+.+ .|.++.+ |+..++ .++|
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~--~~~~~~~~-~v~~~~~~D~~~l~---~~~f 149 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPI--PMSTYGWN-LVRLQSGVDVFFIP---PERC 149 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCC--CCCSTTGG-GEEEECSCCTTTSC---CCCC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHH--HhhhcCCC-CeEEEeccccccCC---cCCC
Confidence 467899999999999999999875 68999999 55443211 11222333 4889999 987764 2589
Q ss_pred cEEEEcCCCCCCcc
Q 012783 406 DKVLLDAPCSGLGV 419 (456)
Q Consensus 406 D~VllDaPCSg~G~ 419 (456)
|+|++|.+|+ +|.
T Consensus 150 D~V~sd~~~~-~g~ 162 (305)
T 2p41_A 150 DTLLCDIGES-SPN 162 (305)
T ss_dssp SEEEECCCCC-CSS
T ss_pred CEEEECCccc-cCc
Confidence 9999999997 664
No 194
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.58 E-value=2.2e-07 Score=88.08 Aligned_cols=74 Identities=22% Similarity=0.258 Sum_probs=63.6
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEE
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vl 409 (456)
...++.+|||+|||+|..+..+++. ..+|+++|+++.+++.+++++...+.. +.++++|+..++. .++||.|+
T Consensus 38 ~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~--v~~~~~d~~~~~~--~~~fD~v~ 110 (252)
T 1wzn_A 38 AKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNLK--IEFLQGDVLEIAF--KNEFDAVT 110 (252)
T ss_dssp CSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCC--CEEEESCGGGCCC--CSCEEEEE
T ss_pred cccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCCc--eEEEECChhhccc--CCCccEEE
Confidence 3467889999999999999999885 468999999999999999999988873 7899999987653 35799998
Q ss_pred E
Q 012783 410 L 410 (456)
Q Consensus 410 l 410 (456)
+
T Consensus 111 ~ 111 (252)
T 1wzn_A 111 M 111 (252)
T ss_dssp E
T ss_pred E
Confidence 6
No 195
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.57 E-value=1.3e-07 Score=91.48 Aligned_cols=87 Identities=15% Similarity=0.018 Sum_probs=63.0
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc
Q 012783 321 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN 400 (456)
Q Consensus 321 ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~ 400 (456)
-...+...+.+.++.+|||+|||+|..+..+++. .++|+++|+|+.+++.+++++....+ .+.+...+.. ....
T Consensus 33 ~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~~v--~~~~~~~~~~-~~~~ 106 (261)
T 3iv6_A 33 DRENDIFLENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADRCV--TIDLLDITAE-IPKE 106 (261)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSSCC--EEEECCTTSC-CCGG
T ss_pred HHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhccc--eeeeeecccc-cccc
Confidence 3445667788889999999999999999999986 46999999999999999998765421 1222222220 0111
Q ss_pred CCCCccEEEEcCC
Q 012783 401 STVKCDKVLLDAP 413 (456)
Q Consensus 401 ~~~~fD~VllDaP 413 (456)
..++||.|+++..
T Consensus 107 ~~~~fD~Vv~~~~ 119 (261)
T 3iv6_A 107 LAGHFDFVLNDRL 119 (261)
T ss_dssp GTTCCSEEEEESC
T ss_pred cCCCccEEEEhhh
Confidence 2368999999653
No 196
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.57 E-value=4.3e-08 Score=97.76 Aligned_cols=82 Identities=12% Similarity=0.139 Sum_probs=66.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--CC-CceEEEEecccccccccCCCCccEE
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV-NSVIRTIHADLRTFADNSTVKCDKV 408 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~--g~-~~~V~~~~~Da~~~~~~~~~~fD~V 408 (456)
.++.+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++..+ ++ ..+++++++|+..+.....++||+|
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 356899999999999999998753 4579999999999999999998763 23 2358999999987543334689999
Q ss_pred EEcCCC
Q 012783 409 LLDAPC 414 (456)
Q Consensus 409 llDaPC 414 (456)
++|++.
T Consensus 194 i~d~~~ 199 (321)
T 2pt6_A 194 IVDSSD 199 (321)
T ss_dssp EEECCC
T ss_pred EECCcC
Confidence 999863
No 197
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.57 E-value=4.9e-08 Score=97.07 Aligned_cols=82 Identities=11% Similarity=0.062 Sum_probs=67.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--CC-CceEEEEecccccccccCCCCccEE
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV-NSVIRTIHADLRTFADNSTVKCDKV 408 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~--g~-~~~V~~~~~Da~~~~~~~~~~fD~V 408 (456)
..+.+|||+|||+|+.+..+++. .+.++|+++|+++.+++.+++++... |+ ..+++++.+|+..+.....++||+|
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKH-ESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTC-TTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEE
Confidence 34689999999999999999875 34689999999999999999998764 43 3458999999987543344689999
Q ss_pred EEcCCC
Q 012783 409 LLDAPC 414 (456)
Q Consensus 409 llDaPC 414 (456)
++|++.
T Consensus 186 i~d~~~ 191 (314)
T 2b2c_A 186 ITDSSD 191 (314)
T ss_dssp EECCC-
T ss_pred EEcCCC
Confidence 999974
No 198
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.57 E-value=1.1e-07 Score=93.01 Aligned_cols=49 Identities=16% Similarity=0.209 Sum_probs=41.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ 382 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g 382 (456)
++.+|||+|||+|..+..++..++ ..+|+++|+++.+++.++++++..+
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~ 94 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYL 94 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC----
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhh
Confidence 688999999999999999999864 4699999999999999999987665
No 199
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.57 E-value=8.5e-08 Score=96.14 Aligned_cols=82 Identities=13% Similarity=0.109 Sum_probs=66.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--CC-CceEEEEeccccccccc-CCCCcc
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV-NSVIRTIHADLRTFADN-STVKCD 406 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~--g~-~~~V~~~~~Da~~~~~~-~~~~fD 406 (456)
...+.+|||+|||+|+.+..+++. .+..+|+++|+++.+++.+++++..+ |+ ..+++++.+|+..+... ..++||
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~-~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fD 196 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARH-ASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD 196 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCcc
Confidence 345689999999999999999875 34579999999999999999998764 44 23589999999876332 236899
Q ss_pred EEEEcCC
Q 012783 407 KVLLDAP 413 (456)
Q Consensus 407 ~VllDaP 413 (456)
+|++|++
T Consensus 197 lIi~d~~ 203 (334)
T 1xj5_A 197 AVIVDSS 203 (334)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999986
No 200
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.55 E-value=1.8e-07 Score=88.81 Aligned_cols=76 Identities=12% Similarity=0.130 Sum_probs=63.3
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEE
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vl 409 (456)
.+.++.+|||+|||+|..+..++.. .++|+++|+++.+++.+++++ ..+..+ +.++.+|+..++. ..++||.|+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~~~~~~-~~~~~~d~~~~~~-~~~~fD~v~ 109 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-AGVDRK-VQVVQADARAIPL-PDESVHGVI 109 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-TTSCTT-EEEEESCTTSCCS-CTTCEEEEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-hccCCc-eEEEEcccccCCC-CCCCeeEEE
Confidence 5678899999999999999999875 479999999999999999988 333444 8999999987653 246899999
Q ss_pred Ec
Q 012783 410 LD 411 (456)
Q Consensus 410 lD 411 (456)
+.
T Consensus 110 ~~ 111 (263)
T 2yqz_A 110 VV 111 (263)
T ss_dssp EE
T ss_pred EC
Confidence 84
No 201
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.55 E-value=1.5e-07 Score=91.95 Aligned_cols=81 Identities=15% Similarity=0.208 Sum_probs=66.1
Q ss_pred HHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC--ceEEEEecccccccccC
Q 012783 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN--SVIRTIHADLRTFADNS 401 (456)
Q Consensus 324 lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~--~~V~~~~~Da~~~~~~~ 401 (456)
.+...+.+.++ +|||+|||+|..+..++.. ..+|+++|+++.+++.+++++...++. .++.++++|+..++.
T Consensus 74 ~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-- 147 (299)
T 3g2m_A 74 EFATRTGPVSG-PVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-- 147 (299)
T ss_dssp HHHHHHCCCCS-CEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC--
T ss_pred HHHHhhCCCCC-cEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc--
Confidence 34445555444 9999999999999999876 468999999999999999999987742 348999999988754
Q ss_pred CCCccEEEE
Q 012783 402 TVKCDKVLL 410 (456)
Q Consensus 402 ~~~fD~Vll 410 (456)
.++||.|++
T Consensus 148 ~~~fD~v~~ 156 (299)
T 3g2m_A 148 DKRFGTVVI 156 (299)
T ss_dssp SCCEEEEEE
T ss_pred CCCcCEEEE
Confidence 478999986
No 202
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.54 E-value=1.8e-07 Score=87.71 Aligned_cols=72 Identities=7% Similarity=0.059 Sum_probs=59.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccc-ccccCCCCccEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FADNSTVKCDKVL 409 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~-~~~~~~~~fD~Vl 409 (456)
+.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++ ..+ ++++++|+.. ++....++||.|+
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----~~~-~~~~~~d~~~~~~~~~~~~fD~v~ 116 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN-----APH-ADVYEWNGKGELPAGLGAPFGLIV 116 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH-----CTT-SEEEECCSCSSCCTTCCCCEEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh-----CCC-ceEEEcchhhccCCcCCCCEEEEE
Confidence 357899999999999999999886 46999999999999999988 333 7899999953 3322147899999
Q ss_pred Ec
Q 012783 410 LD 411 (456)
Q Consensus 410 lD 411 (456)
+.
T Consensus 117 ~~ 118 (226)
T 3m33_A 117 SR 118 (226)
T ss_dssp EE
T ss_pred eC
Confidence 86
No 203
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.54 E-value=1e-07 Score=93.17 Aligned_cols=83 Identities=12% Similarity=0.153 Sum_probs=67.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcC--C-CceEEEEecccccccccCCCCccE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ--V-NSVIRTIHADLRTFADNSTVKCDK 407 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g--~-~~~V~~~~~Da~~~~~~~~~~fD~ 407 (456)
..++.+|||+|||+|+.+..+++. .+..+|+++|+++.+++.+++++..++ + ..+++++.+|+..+.....++||+
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKY-KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceE
Confidence 345689999999999999999875 345799999999999999999886543 1 235899999998764433578999
Q ss_pred EEEcCCC
Q 012783 408 VLLDAPC 414 (456)
Q Consensus 408 VllDaPC 414 (456)
|++|++.
T Consensus 155 Ii~d~~~ 161 (283)
T 2i7c_A 155 IIVDSSD 161 (283)
T ss_dssp EEEECCC
T ss_pred EEEcCCC
Confidence 9999875
No 204
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.53 E-value=1.4e-07 Score=93.25 Aligned_cols=82 Identities=11% Similarity=0.043 Sum_probs=66.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc---CCCceEEEEeccccccccc-CCCCccE
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH---QVNSVIRTIHADLRTFADN-STVKCDK 407 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~---g~~~~V~~~~~Da~~~~~~-~~~~fD~ 407 (456)
.++.+|||+|||+|+.+..+++. .+..+|+++|+++..++.+++++..+ ....+++++.+|+..+... ..++||+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRH-GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 46789999999999999999875 34579999999999999999987432 1223589999999887543 3478999
Q ss_pred EEEcCCC
Q 012783 408 VLLDAPC 414 (456)
Q Consensus 408 VllDaPC 414 (456)
|++|.+.
T Consensus 173 Ii~d~~~ 179 (304)
T 3bwc_A 173 VIIDTTD 179 (304)
T ss_dssp EEEECC-
T ss_pred EEECCCC
Confidence 9999875
No 205
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.53 E-value=2.1e-07 Score=90.73 Aligned_cols=82 Identities=16% Similarity=0.147 Sum_probs=57.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeC-CHHHHHHHHHHH-----HHcCCC----ceEEEEeccccc----
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDI-NKGRLRILNETA-----KLHQVN----SVIRTIHADLRT---- 396 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDi-s~~rl~~l~~n~-----~r~g~~----~~V~~~~~Da~~---- 396 (456)
..+|.+|||+|||+|..++.++.. +.++|+++|+ ++.+++.+++|+ +..|+. +.+.+...|...
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~--~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 154 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLA--GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDS 154 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHT--TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHH
T ss_pred hcCCCeEEEecccccHHHHHHHHc--CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHH
Confidence 357889999999999999988875 3459999999 899999999999 666654 247777555322
Q ss_pred cccc-CCCCccEEEE-cCCC
Q 012783 397 FADN-STVKCDKVLL-DAPC 414 (456)
Q Consensus 397 ~~~~-~~~~fD~Vll-DaPC 414 (456)
+... ..++||+|++ |+..
T Consensus 155 ~~~~~~~~~fD~Ii~~dvl~ 174 (281)
T 3bzb_A 155 LQRCTGLQRFQVVLLADLLS 174 (281)
T ss_dssp HHHHHSCSSBSEEEEESCCS
T ss_pred HHhhccCCCCCEEEEeCccc
Confidence 2110 2368999987 7665
No 206
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.53 E-value=2.4e-07 Score=87.95 Aligned_cols=81 Identities=16% Similarity=0.172 Sum_probs=65.4
Q ss_pred HHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCC
Q 012783 325 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVK 404 (456)
Q Consensus 325 v~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~ 404 (456)
+...+...++.+|||+|||+|..+..+++. +...|+++|+++.+++.+++++. . ..+.++.+|+..++. ..++
T Consensus 36 l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~---~-~~~~~~~~d~~~~~~-~~~~ 108 (253)
T 3g5l_A 36 LKKMLPDFNQKTVLDLGCGFGWHCIYAAEH--GAKKVLGIDLSERMLTEAKRKTT---S-PVVCYEQKAIEDIAI-EPDA 108 (253)
T ss_dssp HHTTCCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHCC---C-TTEEEEECCGGGCCC-CTTC
T ss_pred HHHhhhccCCCEEEEECCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhhc---c-CCeEEEEcchhhCCC-CCCC
Confidence 345566668999999999999999999886 23489999999999999988765 2 348999999987653 2478
Q ss_pred ccEEEEcC
Q 012783 405 CDKVLLDA 412 (456)
Q Consensus 405 fD~VllDa 412 (456)
||+|++.-
T Consensus 109 fD~v~~~~ 116 (253)
T 3g5l_A 109 YNVVLSSL 116 (253)
T ss_dssp EEEEEEES
T ss_pred eEEEEEch
Confidence 99999853
No 207
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.52 E-value=7.9e-08 Score=89.30 Aligned_cols=84 Identities=15% Similarity=0.166 Sum_probs=64.5
Q ss_pred HHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHH----HHcCCCceEEEEecccccccccC
Q 012783 326 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETA----KLHQVNSVIRTIHADLRTFADNS 401 (456)
Q Consensus 326 ~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~----~r~g~~~~V~~~~~Da~~~~~~~ 401 (456)
...+.+.++.+|||+|||+|..+..+++.. +.++|+++|+++.+++.+.+++ ...++++ +.++++|+..++..
T Consensus 20 ~~~l~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~-v~~~~~d~~~l~~~- 96 (218)
T 3mq2_A 20 FEQLRSQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPN-LLYLWATAERLPPL- 96 (218)
T ss_dssp HHHHHTTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTT-EEEEECCSTTCCSC-
T ss_pred HHHhhccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCc-eEEEecchhhCCCC-
Confidence 344557789999999999999999999974 4689999999999888654443 3466765 89999999886543
Q ss_pred CCCccEEEEcCC
Q 012783 402 TVKCDKVLLDAP 413 (456)
Q Consensus 402 ~~~fD~VllDaP 413 (456)
... |.|.+..+
T Consensus 97 ~~~-d~v~~~~~ 107 (218)
T 3mq2_A 97 SGV-GELHVLMP 107 (218)
T ss_dssp CCE-EEEEEESC
T ss_pred CCC-CEEEEEcc
Confidence 234 77776554
No 208
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.52 E-value=2.3e-07 Score=86.37 Aligned_cols=76 Identities=21% Similarity=0.219 Sum_probs=65.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC----ceEEEEecccccccccCCCCccE
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN----SVIRTIHADLRTFADNSTVKCDK 407 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~----~~V~~~~~Da~~~~~~~~~~fD~ 407 (456)
.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++...++. ..+.++.+|+..++.. .++||.
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~D~ 104 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFH-DSSFDF 104 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSC-TTCEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCC-CCceeE
Confidence 47899999999999999999986 469999999999999999999888773 2488999999876532 478999
Q ss_pred EEEc
Q 012783 408 VLLD 411 (456)
Q Consensus 408 VllD 411 (456)
|++.
T Consensus 105 v~~~ 108 (235)
T 3sm3_A 105 AVMQ 108 (235)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9985
No 209
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.52 E-value=1.6e-07 Score=88.74 Aligned_cols=75 Identities=19% Similarity=0.131 Sum_probs=63.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEc
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllD 411 (456)
++.+|||+|||+|..+..+++.. ...|+++|+++.+++.+++++...+.. .+.++.+|+..++.. .++||+|+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~-~~~fD~v~~~ 153 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKR-VRNYFCCGLQDFTPE-PDSYDVIWIQ 153 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGG-EEEEEECCGGGCCCC-SSCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCc-eEEEEEcChhhcCCC-CCCEEEEEEc
Confidence 68999999999999999888763 468999999999999999998877533 488999998776533 3589999986
No 210
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.51 E-value=2.2e-07 Score=84.51 Aligned_cols=77 Identities=22% Similarity=0.337 Sum_probs=58.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCC--------ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEE-ecccccccc--
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQ--------GLVYAIDINKGRLRILNETAKLHQVNSVIRTI-HADLRTFAD-- 399 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~--------g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~-~~Da~~~~~-- 399 (456)
+.++.+|||+|||+|..+..+++.+++. ++|+++|+++.+ ...+ +.++ .+|+.....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~-~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEG-ATFLCPADVTDPRTSQ 87 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTT-CEEECSCCTTSHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCC-CeEEEeccCCCHHHHH
Confidence 5689999999999999999999987643 799999999842 2344 6788 888765421
Q ss_pred -----cCCCCccEEEEcCCCCCCcc
Q 012783 400 -----NSTVKCDKVLLDAPCSGLGV 419 (456)
Q Consensus 400 -----~~~~~fD~VllDaPCSg~G~ 419 (456)
...++||+|++|.++..+|.
T Consensus 88 ~~~~~~~~~~fD~V~~~~~~~~~~~ 112 (196)
T 2nyu_A 88 RILEVLPGRRADVILSDMAPNATGF 112 (196)
T ss_dssp HHHHHSGGGCEEEEEECCCCCCCSC
T ss_pred HHHHhcCCCCCcEEEeCCCCCCCCC
Confidence 11247999999986665554
No 211
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.51 E-value=3e-07 Score=86.93 Aligned_cols=82 Identities=17% Similarity=0.101 Sum_probs=66.4
Q ss_pred HHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCC
Q 012783 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 403 (456)
Q Consensus 324 lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~ 403 (456)
.+...+...++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++++... ..+.++++|+..++. ..+
T Consensus 84 ~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~-~~~ 157 (254)
T 1xtp_A 84 NFIASLPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATL-PPN 157 (254)
T ss_dssp HHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCC-CSS
T ss_pred HHHHhhcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCC-CCC
Confidence 33445566788999999999999999999874 468999999999999999987654 348999999987653 236
Q ss_pred CccEEEEc
Q 012783 404 KCDKVLLD 411 (456)
Q Consensus 404 ~fD~VllD 411 (456)
+||+|++.
T Consensus 158 ~fD~v~~~ 165 (254)
T 1xtp_A 158 TYDLIVIQ 165 (254)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEc
Confidence 89999973
No 212
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.51 E-value=1.6e-07 Score=93.20 Aligned_cols=83 Identities=10% Similarity=0.105 Sum_probs=67.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--C-C-CceEEEEecccccccccCCCCccE
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--Q-V-NSVIRTIHADLRTFADNSTVKCDK 407 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~--g-~-~~~V~~~~~Da~~~~~~~~~~fD~ 407 (456)
..+.+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++..+ | + ..+++++.+|+..+.....++||+
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV 154 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccE
Confidence 346899999999999999998753 4579999999999999999998752 2 2 235899999998754334578999
Q ss_pred EEEcCCCC
Q 012783 408 VLLDAPCS 415 (456)
Q Consensus 408 VllDaPCS 415 (456)
|++|++..
T Consensus 155 Ii~d~~~~ 162 (314)
T 1uir_A 155 VIIDLTDP 162 (314)
T ss_dssp EEEECCCC
T ss_pred EEECCCCc
Confidence 99998763
No 213
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.50 E-value=4e-07 Score=90.13 Aligned_cols=97 Identities=20% Similarity=0.240 Sum_probs=76.5
Q ss_pred cccccccccchHHHHHHHhcCC--CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceE
Q 012783 310 LKEGLCAVQDESAGLVVAVVDP--QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVI 387 (456)
Q Consensus 310 ~~~G~~~vQd~ss~lv~~~l~~--~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V 387 (456)
|.+++...+......++..++. .++.+|||+|||+|..+..+++.. +..+++++|++ .+++.+++++...|+.++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v 217 (335)
T 2r3s_A 140 FAKAMSPMMANPAQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVASRY 217 (335)
T ss_dssp HHHHSGGGGHHHHHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCGGGE
T ss_pred HHHHHHHHHhhhHHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCCcce
Confidence 4444444444444455556666 788999999999999999999986 45799999999 9999999999999998779
Q ss_pred EEEecccccccccCCCCccEEEE
Q 012783 388 RTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 388 ~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
+++.+|+...+. ...||.|++
T Consensus 218 ~~~~~d~~~~~~--~~~~D~v~~ 238 (335)
T 2r3s_A 218 HTIAGSAFEVDY--GNDYDLVLL 238 (335)
T ss_dssp EEEESCTTTSCC--CSCEEEEEE
T ss_pred EEEecccccCCC--CCCCcEEEE
Confidence 999999876432 235999998
No 214
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.50 E-value=3.3e-07 Score=85.27 Aligned_cols=78 Identities=17% Similarity=0.266 Sum_probs=64.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCC--CceEEEEecccccc------------
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV--NSVIRTIHADLRTF------------ 397 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~--~~~V~~~~~Da~~~------------ 397 (456)
.+..+||++|+ |+.|+.+|+. . .|+|+++|.++++.+.+++++++.|+ .++|+++.+|+...
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred hCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhh
Confidence 45789999998 6888888873 3 69999999999999999999999998 77799999997542
Q ss_pred ---cc--------cCCCCccEEEEcCC
Q 012783 398 ---AD--------NSTVKCDKVLLDAP 413 (456)
Q Consensus 398 ---~~--------~~~~~fD~VllDaP 413 (456)
+. ...++||.||+|+.
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~ 131 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGR 131 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSS
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCC
Confidence 11 11268999999996
No 215
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.50 E-value=1.2e-07 Score=87.98 Aligned_cols=76 Identities=14% Similarity=0.131 Sum_probs=62.9
Q ss_pred HhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCcc
Q 012783 327 AVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCD 406 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD 406 (456)
..+.+.++.+|||+|||+|..+..+++. ..+|+++|+++.+++.+++++. . .+.++++|+..++.. ++||
T Consensus 39 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~----~-~~~~~~~d~~~~~~~--~~fD 108 (220)
T 3hnr_A 39 EDVVNKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP----K-EFSITEGDFLSFEVP--TSID 108 (220)
T ss_dssp HHHHHTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC----T-TCCEESCCSSSCCCC--SCCS
T ss_pred HHhhccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC----C-ceEEEeCChhhcCCC--CCeE
Confidence 3344558899999999999999999986 4699999999999999988755 2 378899999887543 7899
Q ss_pred EEEEcC
Q 012783 407 KVLLDA 412 (456)
Q Consensus 407 ~VllDa 412 (456)
.|++..
T Consensus 109 ~v~~~~ 114 (220)
T 3hnr_A 109 TIVSTY 114 (220)
T ss_dssp EEEEES
T ss_pred EEEECc
Confidence 999863
No 216
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.50 E-value=3.1e-07 Score=84.21 Aligned_cols=77 Identities=14% Similarity=0.082 Sum_probs=63.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEc
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllD 411 (456)
.++.+|||+|||+|..+..++.. + ...|+++|+++.+++.+++++.. .. .+.++.+|+..++. ..++||.|++.
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~~D~s~~~~~~a~~~~~~--~~-~i~~~~~d~~~~~~-~~~~fD~v~~~ 114 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLG-G-FPNVTSVDYSSVVVAAMQACYAH--VP-QLRWETMDVRKLDF-PSASFDVVLEK 114 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHT-T-CCCEEEEESCHHHHHHHHHHTTT--CT-TCEEEECCTTSCCS-CSSCEEEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhccc--CC-CcEEEEcchhcCCC-CCCcccEEEEC
Confidence 67899999999999999999886 2 23899999999999999998764 23 37899999987642 24689999987
Q ss_pred CCC
Q 012783 412 APC 414 (456)
Q Consensus 412 aPC 414 (456)
.+.
T Consensus 115 ~~~ 117 (215)
T 2pxx_A 115 GTL 117 (215)
T ss_dssp SHH
T ss_pred cch
Confidence 664
No 217
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.49 E-value=1.9e-07 Score=90.27 Aligned_cols=78 Identities=23% Similarity=0.255 Sum_probs=64.7
Q ss_pred HHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCC
Q 012783 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 403 (456)
Q Consensus 324 lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~ 403 (456)
.+...+.+.++.+|||+|||+|..+..++. +.+.|+++|+++.+++.+++++ .+ +.++.+|+..++. .+
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-----~~-~~~~~~d~~~~~~--~~ 116 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY-----PH-LHFDVADARNFRV--DK 116 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-----TT-SCEEECCTTTCCC--SS
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC-----CC-CEEEECChhhCCc--CC
Confidence 445667788899999999999999999988 3579999999999999998764 33 6788999987653 46
Q ss_pred CccEEEEcC
Q 012783 404 KCDKVLLDA 412 (456)
Q Consensus 404 ~fD~VllDa 412 (456)
+||.|++..
T Consensus 117 ~fD~v~~~~ 125 (279)
T 3ccf_A 117 PLDAVFSNA 125 (279)
T ss_dssp CEEEEEEES
T ss_pred CcCEEEEcc
Confidence 899999853
No 218
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.48 E-value=2.1e-07 Score=91.43 Aligned_cols=74 Identities=19% Similarity=0.178 Sum_probs=56.9
Q ss_pred cCCCCCCeEEEEcC------CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEE-EecccccccccC
Q 012783 329 VDPQPGQSIVDCCA------APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRT-IHADLRTFADNS 401 (456)
Q Consensus 329 l~~~~g~~VLDlcA------GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~-~~~Da~~~~~~~ 401 (456)
+.+.+|++|||+|| |||+ ..++++++..++|+|+|+++. +.+ +++ +++|+..++.
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~-v~~~i~gD~~~~~~-- 120 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSD-ADSTLIGDCATVHT-- 120 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCS-SSEEEESCGGGCCC--
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCC-CEEEEECccccCCc--
Confidence 46788999999999 7788 556777766789999999998 133 678 9999987642
Q ss_pred CCCccEEEEcCCCCCCccc
Q 012783 402 TVKCDKVLLDAPCSGLGVL 420 (456)
Q Consensus 402 ~~~fD~VllDaPCSg~G~i 420 (456)
.++||+|++|+++...|..
T Consensus 121 ~~~fD~Vvsn~~~~~~g~~ 139 (290)
T 2xyq_A 121 ANKWDLIISDMYDPRTKHV 139 (290)
T ss_dssp SSCEEEEEECCCCCC---C
T ss_pred cCcccEEEEcCCccccccc
Confidence 2689999999887776664
No 219
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.48 E-value=2.3e-07 Score=101.81 Aligned_cols=85 Identities=12% Similarity=0.124 Sum_probs=69.6
Q ss_pred HHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc------CCCceEEEEecccccc
Q 012783 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH------QVNSVIRTIHADLRTF 397 (456)
Q Consensus 324 lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~------g~~~~V~~~~~Da~~~ 397 (456)
.+...+...++.+|||+|||+|..+..+++..++..+|+++|+++.+++.++++++.. |+.+ |+++++|+..+
T Consensus 712 ~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~n-VefiqGDa~dL 790 (950)
T 3htx_A 712 YALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKS-ATLYDGSILEF 790 (950)
T ss_dssp HHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSE-EEEEESCTTSC
T ss_pred HHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCc-eEEEECchHhC
Confidence 3455566668999999999999999999887434479999999999999999977643 5554 89999999887
Q ss_pred cccCCCCccEEEE
Q 012783 398 ADNSTVKCDKVLL 410 (456)
Q Consensus 398 ~~~~~~~fD~Vll 410 (456)
+.. .+.||+|++
T Consensus 791 p~~-d~sFDlVV~ 802 (950)
T 3htx_A 791 DSR-LHDVDIGTC 802 (950)
T ss_dssp CTT-SCSCCEEEE
T ss_pred Ccc-cCCeeEEEE
Confidence 653 368999998
No 220
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.47 E-value=1.6e-07 Score=88.20 Aligned_cols=73 Identities=21% Similarity=0.133 Sum_probs=62.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEc
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllD 411 (456)
+.+|||+|||+|..+..++. ....|+++|+++.+++.+++++...+...++.++++|+..++. ..+||+|++.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v~~~ 139 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP--TELFDLIFDY 139 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC--SSCEEEEEEE
T ss_pred CCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC--CCCeeEEEEC
Confidence 45999999999999998875 3578999999999999999999876655569999999988653 3589999974
No 221
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.47 E-value=3.4e-07 Score=85.82 Aligned_cols=73 Identities=15% Similarity=0.103 Sum_probs=63.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEcC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 412 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllDa 412 (456)
++.+|||+|||+|..+..+++. ..+|+++|+++.+++.+++++...+. .+.++++|+..++.. ++||+|++..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~--~~fD~v~~~~ 109 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNIN--RKFDLITCCL 109 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCS--CCEEEEEECT
T ss_pred CCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCcc--CCceEEEEcC
Confidence 7889999999999999999876 36899999999999999999998877 378999999876532 6899999853
No 222
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.45 E-value=4.5e-07 Score=83.13 Aligned_cols=77 Identities=14% Similarity=0.168 Sum_probs=61.8
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEE
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vl 409 (456)
...++.+|||+|||+|..++.++.. ...+|+++|+++.+++.++++++..+. .+.++++|+..++. ..++||.|+
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-~~~~fD~v~ 94 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRENNF--KLNISKGDIRKLPF-KDESMSFVY 94 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHHHTC--CCCEEECCTTSCCS-CTTCEEEEE
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEECchhhCCC-CCCceeEEE
Confidence 3456899999999999986655544 246999999999999999999988774 27789999987653 246899999
Q ss_pred Ec
Q 012783 410 LD 411 (456)
Q Consensus 410 lD 411 (456)
+.
T Consensus 95 ~~ 96 (209)
T 2p8j_A 95 SY 96 (209)
T ss_dssp EC
T ss_pred Ec
Confidence 75
No 223
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.45 E-value=1.9e-07 Score=89.51 Aligned_cols=81 Identities=16% Similarity=0.156 Sum_probs=65.4
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc
Q 012783 321 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN 400 (456)
Q Consensus 321 ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~ 400 (456)
-...+...+.+.++.+|||+|||+|..+..+++ +..+|+++|+++.+++.++++. + +.++++|+..++.
T Consensus 22 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~------~-~~~~~~d~~~~~~- 90 (261)
T 3ege_A 22 IVNAIINLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP------Q-VEWFTGYAENLAL- 90 (261)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT------T-EEEECCCTTSCCS-
T ss_pred HHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc------C-CEEEECchhhCCC-
Confidence 344556677778899999999999999999987 3579999999999988766543 3 8899999987653
Q ss_pred CCCCccEEEEcC
Q 012783 401 STVKCDKVLLDA 412 (456)
Q Consensus 401 ~~~~fD~VllDa 412 (456)
..++||.|++..
T Consensus 91 ~~~~fD~v~~~~ 102 (261)
T 3ege_A 91 PDKSVDGVISIL 102 (261)
T ss_dssp CTTCBSEEEEES
T ss_pred CCCCEeEEEEcc
Confidence 247899999854
No 224
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.45 E-value=9.5e-07 Score=88.96 Aligned_cols=89 Identities=15% Similarity=0.069 Sum_probs=72.8
Q ss_pred cchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccc
Q 012783 318 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 397 (456)
Q Consensus 318 Qd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~ 397 (456)
++.....+...++..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...|+.++|+++.+|+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 244 (374)
T 1qzz_A 167 EDLAYEAPADAYDWSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKP 244 (374)
T ss_dssp STTTTHHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred hHhHHHHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCc
Confidence 33333455666777789999999999999999999986 4579999999 999999999999999886799999998652
Q ss_pred cccCCCCccEEEEc
Q 012783 398 ADNSTVKCDKVLLD 411 (456)
Q Consensus 398 ~~~~~~~fD~VllD 411 (456)
.+..||+|++.
T Consensus 245 ---~~~~~D~v~~~ 255 (374)
T 1qzz_A 245 ---LPVTADVVLLS 255 (374)
T ss_dssp ---CSCCEEEEEEE
T ss_pred ---CCCCCCEEEEe
Confidence 12349999984
No 225
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.44 E-value=4.9e-07 Score=84.76 Aligned_cols=83 Identities=18% Similarity=0.118 Sum_probs=66.3
Q ss_pred HHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCC
Q 012783 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 403 (456)
Q Consensus 324 lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~ 403 (456)
.+...+...++.+|||+|||+|..+..+++. +..+|+++|+++.+++.++++... +.+.++++|+..++. ..+
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~-~~~ 106 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHL-PQD 106 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCC-CTT
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccC-CCC
Confidence 4566677778999999999999999999886 334899999999999999887543 248899999987653 246
Q ss_pred CccEEEEcCC
Q 012783 404 KCDKVLLDAP 413 (456)
Q Consensus 404 ~fD~VllDaP 413 (456)
+||.|++...
T Consensus 107 ~fD~v~~~~~ 116 (243)
T 3bkw_A 107 SFDLAYSSLA 116 (243)
T ss_dssp CEEEEEEESC
T ss_pred CceEEEEecc
Confidence 8999998543
No 226
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.43 E-value=5.2e-07 Score=84.59 Aligned_cols=73 Identities=23% Similarity=0.282 Sum_probs=62.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEc
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllD 411 (456)
.++.+|||+|||+|..+..++.. .+|+++|+++.+++.+++++...+. .+.++++|+..++. .++||.|++.
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~--~~~fD~v~~~ 103 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNR--HVDFWVQDMRELEL--PEPVDAITIL 103 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTC--CCEEEECCGGGCCC--SSCEEEEEEC
T ss_pred CCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCC--ceEEEEcChhhcCC--CCCcCEEEEe
Confidence 45789999999999999988764 6899999999999999999988773 37899999987653 2689999985
Q ss_pred C
Q 012783 412 A 412 (456)
Q Consensus 412 a 412 (456)
.
T Consensus 104 ~ 104 (243)
T 3d2l_A 104 C 104 (243)
T ss_dssp T
T ss_pred C
Confidence 3
No 227
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.42 E-value=3.3e-07 Score=91.06 Aligned_cols=79 Identities=14% Similarity=0.145 Sum_probs=65.0
Q ss_pred CeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccC-CCCccEEEEcCC
Q 012783 335 QSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-TVKCDKVLLDAP 413 (456)
Q Consensus 335 ~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~-~~~fD~VllDaP 413 (456)
.+|||+|||.|+.+..+++..+ ..+|++||+++.+++.+++++...+. .+++++++|+..+.... .++||+|++|++
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~~~-~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~ 168 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIPRA-PRVKIRVDDARMVAESFTPASRDVIIRDVF 168 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCCCT-TTEEEEESCHHHHHHTCCTTCEEEEEECCS
T ss_pred CEEEEEECCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhccccCC-CceEEEECcHHHHHhhccCCCCCEEEECCC
Confidence 4999999999999999998754 56999999999999999998754333 35899999998875432 468999999976
Q ss_pred CC
Q 012783 414 CS 415 (456)
Q Consensus 414 CS 415 (456)
..
T Consensus 169 ~~ 170 (317)
T 3gjy_A 169 AG 170 (317)
T ss_dssp TT
T ss_pred Cc
Confidence 53
No 228
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.42 E-value=6.3e-07 Score=80.61 Aligned_cols=74 Identities=15% Similarity=0.136 Sum_probs=61.0
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
+.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++. + +.++++|+..++.. .++||.|++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~-----~-~~~~~~d~~~~~~~-~~~~D~i~~ 113 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDFP-----E-ARWVVGDLSVDQIS-ETDFDLIVS 113 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHCT-----T-SEEEECCTTTSCCC-CCCEEEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhCC-----C-CcEEEcccccCCCC-CCceeEEEE
Confidence 457899999999999999999886 4689999999999999988752 3 67889998775432 368999999
Q ss_pred cCCC
Q 012783 411 DAPC 414 (456)
Q Consensus 411 DaPC 414 (456)
++++
T Consensus 114 ~~~~ 117 (195)
T 3cgg_A 114 AGNV 117 (195)
T ss_dssp CCCC
T ss_pred CCcH
Confidence 7554
No 229
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.41 E-value=4.6e-07 Score=87.85 Aligned_cols=85 Identities=11% Similarity=0.095 Sum_probs=66.6
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC---ceEEEEecccccccc
Q 012783 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN---SVIRTIHADLRTFAD 399 (456)
Q Consensus 323 ~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~---~~V~~~~~Da~~~~~ 399 (456)
..+...+...++.+|||+|||+|..+..++.. ..+|+++|+|+.+++.+++++...+.. ..+.+..+|+..++.
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK 123 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH
T ss_pred HHHHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcc
Confidence 34555566668899999999999999999986 359999999999999999987554432 236788999887651
Q ss_pred --cCCCCccEEEE
Q 012783 400 --NSTVKCDKVLL 410 (456)
Q Consensus 400 --~~~~~fD~Vll 410 (456)
...++||.|++
T Consensus 124 ~~~~~~~fD~V~~ 136 (293)
T 3thr_A 124 DVPAGDGFDAVIC 136 (293)
T ss_dssp HSCCTTCEEEEEE
T ss_pred ccccCCCeEEEEE
Confidence 12468999998
No 230
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.41 E-value=2.8e-07 Score=88.77 Aligned_cols=91 Identities=16% Similarity=0.139 Sum_probs=68.9
Q ss_pred hHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc
Q 012783 320 ESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (456)
Q Consensus 320 ~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~ 399 (456)
.-...++..+++.++++|||+|||+|..|. ++ . ...++|+|+|+++.+++.+++++... + +++++++|+..++.
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~-~~~~~v~avEid~~~~~~a~~~~~~~--~-~v~~i~~D~~~~~~ 81 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE-PV-G-ERLDQLTVIELDRDLAARLQTHPFLG--P-KLTIYQQDAMTFNF 81 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HH-H-TTCSCEEEECCCHHHHHHHHTCTTTG--G-GEEEECSCGGGCCH
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hh-h-CCCCeEEEEECCHHHHHHHHHHhccC--C-ceEEEECchhhCCH
Confidence 344456677788899999999999999999 64 3 22233999999999999999887543 3 48999999987532
Q ss_pred cC----CCCccEEEEcCCCCC
Q 012783 400 NS----TVKCDKVLLDAPCSG 416 (456)
Q Consensus 400 ~~----~~~fD~VllDaPCSg 416 (456)
.. ....|.|+.++|..-
T Consensus 82 ~~~~~~~~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 82 GELAEKMGQPLRVFGNLPYNI 102 (252)
T ss_dssp HHHHHHHTSCEEEEEECCTTT
T ss_pred HHhhcccCCceEEEECCCCCc
Confidence 11 124579999999864
No 231
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.41 E-value=7.4e-07 Score=81.48 Aligned_cols=68 Identities=16% Similarity=0.152 Sum_probs=58.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEc
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllD 411 (456)
+.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++ ..+ +.++++|+..++.. .++||+|++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-----~~~-~~~~~~d~~~~~~~-~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQT-----HPS-VTFHHGTITDLSDS-PKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHH-----CTT-SEEECCCGGGGGGS-CCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHh-----CCC-CeEEeCcccccccC-CCCeEEEEeh
Confidence 889999999999999999886 45899999999999999887 223 78999999887533 4789999984
No 232
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.39 E-value=7.2e-07 Score=82.18 Aligned_cols=70 Identities=13% Similarity=-0.011 Sum_probs=59.0
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEE
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vl 409 (456)
...++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++ + +.++.+|+..++ ..++||+|+
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~----~~~~~~d~~~~~--~~~~fD~v~ 107 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL---G----RPVRTMLFHQLD--AIDAYDAVW 107 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH---T----SCCEECCGGGCC--CCSCEEEEE
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc---C----CceEEeeeccCC--CCCcEEEEE
Confidence 3457899999999999999999986 469999999999999999887 2 456788988776 347899999
Q ss_pred Ec
Q 012783 410 LD 411 (456)
Q Consensus 410 lD 411 (456)
+.
T Consensus 108 ~~ 109 (211)
T 3e23_A 108 AH 109 (211)
T ss_dssp EC
T ss_pred ec
Confidence 85
No 233
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.39 E-value=6.5e-08 Score=94.44 Aligned_cols=76 Identities=18% Similarity=0.146 Sum_probs=54.6
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHH-HHcCCCceEEEE--ecccccccccCCCCcc
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETA-KLHQVNSVIRTI--HADLRTFADNSTVKCD 406 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~-~r~g~~~~V~~~--~~Da~~~~~~~~~~fD 406 (456)
.+.+|.+|||+|||||+.|..+++. ++|+|+|+++ ++..++++. ........+.++ ++|+..++ .++||
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~---~~~fD 150 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME---PFQAD 150 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC---CCCCS
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC---CCCcC
Confidence 3568999999999999999998875 6899999998 432222110 000111137888 99998765 36899
Q ss_pred EEEEcCC
Q 012783 407 KVLLDAP 413 (456)
Q Consensus 407 ~VllDaP 413 (456)
.|++|..
T Consensus 151 ~Vvsd~~ 157 (276)
T 2wa2_A 151 TVLCDIG 157 (276)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999976
No 234
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.38 E-value=5.6e-08 Score=94.35 Aligned_cols=74 Identities=19% Similarity=0.126 Sum_probs=54.1
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHH---HHcCCCceEEEE--ecccccccccCCCC
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETA---KLHQVNSVIRTI--HADLRTFADNSTVK 404 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~---~r~g~~~~V~~~--~~Da~~~~~~~~~~ 404 (456)
.+.+|.+|||+|||||+.|..+++. ++|+|+|+++ ++..++++. +..+. .|.++ ++|+..++ .++
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~--~v~~~~~~~D~~~l~---~~~ 140 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGW--NIVKFKSRVDIHTLP---VER 140 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTG--GGEEEECSCCTTTSC---CCC
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCC--CeEEEecccCHhHCC---CCC
Confidence 3568999999999999999988875 7899999998 432221110 01111 37788 89998765 368
Q ss_pred ccEEEEcCC
Q 012783 405 CDKVLLDAP 413 (456)
Q Consensus 405 fD~VllDaP 413 (456)
||.|++|..
T Consensus 141 fD~V~sd~~ 149 (265)
T 2oxt_A 141 TDVIMCDVG 149 (265)
T ss_dssp CSEEEECCC
T ss_pred CcEEEEeCc
Confidence 999999976
No 235
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.38 E-value=6.2e-07 Score=96.08 Aligned_cols=80 Identities=15% Similarity=0.119 Sum_probs=67.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc-CCCCccEEEEc
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-STVKCDKVLLD 411 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~-~~~~fD~VllD 411 (456)
.+.+|||+|||.|..+..||++ .+.|+++|.++..++.++..+...|..+ |.+.++|+.++... .+++||+|+|
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~fD~v~~- 140 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDFA-AEFRVGRIEEVIAALEEGEFDLAIG- 140 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTSE-EEEEECCHHHHHHHCCTTSCSEEEE-
T ss_pred CCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCCc-eEEEECCHHHHhhhccCCCccEEEE-
Confidence 4679999999999999999986 5799999999999999999999888655 89999999887443 3468999997
Q ss_pred CCCCCCccccc
Q 012783 412 APCSGLGVLSK 422 (456)
Q Consensus 412 aPCSg~G~irr 422 (456)
++++-+
T Consensus 141 -----~e~~eh 146 (569)
T 4azs_A 141 -----LSVFHH 146 (569)
T ss_dssp -----ESCHHH
T ss_pred -----Ccchhc
Confidence 566544
No 236
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.37 E-value=5.7e-07 Score=84.21 Aligned_cols=71 Identities=11% Similarity=0.080 Sum_probs=58.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
..++.+|||+|||+|..+..+++. ..+|+++|+++.+++.+++++.. .+.++++|+..+. ..++||.|++
T Consensus 40 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~--~~~~fD~v~~ 109 (250)
T 2p7i_A 40 FFRPGNLLELGSFKGDFTSRLQEH---FNDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQ--LPRRYDNIVL 109 (250)
T ss_dssp GCCSSCEEEESCTTSHHHHHHTTT---CSCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCC--CSSCEEEEEE
T ss_pred hcCCCcEEEECCCCCHHHHHHHHh---CCcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcC--cCCcccEEEE
Confidence 357889999999999999999875 34899999999999999887543 3889999998763 3468999997
Q ss_pred c
Q 012783 411 D 411 (456)
Q Consensus 411 D 411 (456)
-
T Consensus 110 ~ 110 (250)
T 2p7i_A 110 T 110 (250)
T ss_dssp E
T ss_pred h
Confidence 3
No 237
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.36 E-value=1.1e-06 Score=86.77 Aligned_cols=76 Identities=11% Similarity=-0.022 Sum_probs=55.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc-----eEEEEeccc------ccccc-c
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS-----VIRTIHADL------RTFAD-N 400 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~-----~V~~~~~Da------~~~~~-~ 400 (456)
++.+|||+|||+|+.+..++.. +.++|+|+|+|+.+++.++++....+... .+.+.++|+ ..++. .
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 5889999999999876666553 34689999999999999999988776531 155666666 22221 1
Q ss_pred CCCCccEEEE
Q 012783 401 STVKCDKVLL 410 (456)
Q Consensus 401 ~~~~fD~Vll 410 (456)
..++||+|+|
T Consensus 126 ~~~~FD~V~~ 135 (302)
T 2vdw_A 126 YFGKFNIIDW 135 (302)
T ss_dssp CSSCEEEEEE
T ss_pred cCCCeeEEEE
Confidence 2368999985
No 238
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.36 E-value=1.5e-06 Score=92.42 Aligned_cols=105 Identities=19% Similarity=0.251 Sum_probs=82.8
Q ss_pred cccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCC------------CceEEEEeCCHHHHHHHHHHHH
Q 012783 312 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG------------QGLVYAIDINKGRLRILNETAK 379 (456)
Q Consensus 312 ~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~------------~g~V~AvDis~~rl~~l~~n~~ 379 (456)
.|.|+=-..-+.+++.++++++|++|+|-|||+|++.+.+.+.+.. ...++++|+++.....++-|+-
T Consensus 196 ~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~ 275 (530)
T 3ufb_A 196 SGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLL 275 (530)
T ss_dssp CCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHH
T ss_pred CceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHH
Confidence 3555554556678889999999999999999999998888776543 2469999999999999999998
Q ss_pred HcCCCceEEEEeccccccccc---CCCCccEEEEcCCCCCC
Q 012783 380 LHQVNSVIRTIHADLRTFADN---STVKCDKVLLDAPCSGL 417 (456)
Q Consensus 380 r~g~~~~V~~~~~Da~~~~~~---~~~~fD~VllDaPCSg~ 417 (456)
..|+.. ..+.++|....+.. ...+||+|+.+||-++.
T Consensus 276 lhg~~~-~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~ 315 (530)
T 3ufb_A 276 LHGLEY-PRIDPENSLRFPLREMGDKDRVDVILTNPPFGGE 315 (530)
T ss_dssp HHTCSC-CEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCB
T ss_pred hcCCcc-ccccccccccCchhhhcccccceEEEecCCCCcc
Confidence 888875 45778887543321 13479999999999754
No 239
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.35 E-value=8.2e-07 Score=83.29 Aligned_cols=72 Identities=13% Similarity=0.129 Sum_probs=59.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEc
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllD 411 (456)
.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++. ... .+.++++|+..++. ..++||.|++.
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~~~-~~~~~~~d~~~~~~-~~~~fD~v~~~ 123 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG---EGP-DLSFIKGDLSSLPF-ENEQFEAIMAI 123 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT---CBT-TEEEEECBTTBCSS-CTTCEEEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc---ccC-CceEEEcchhcCCC-CCCCccEEEEc
Confidence 47889999999999999999986 468999999999999988774 223 48899999987653 24789999974
No 240
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.35 E-value=3.5e-07 Score=92.22 Aligned_cols=80 Identities=11% Similarity=0.135 Sum_probs=65.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcC---CCc----eEEEEeccccccccc---CC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ---VNS----VIRTIHADLRTFADN---ST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g---~~~----~V~~~~~Da~~~~~~---~~ 402 (456)
.+.+|||+|+|.|+.+..+++. + ..+|++||+++..++.+++++..++ +++ +++++.+|+..+... ..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~-~-~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 4689999999999999998876 3 3789999999999999999976432 221 589999999887653 24
Q ss_pred CCccEEEEcCCC
Q 012783 403 VKCDKVLLDAPC 414 (456)
Q Consensus 403 ~~fD~VllDaPC 414 (456)
++||+|++|+|-
T Consensus 266 ~~fDvII~D~~d 277 (364)
T 2qfm_A 266 REFDYVINDLTA 277 (364)
T ss_dssp CCEEEEEEECCS
T ss_pred CCceEEEECCCC
Confidence 689999999975
No 241
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.34 E-value=1.6e-06 Score=86.87 Aligned_cols=84 Identities=14% Similarity=0.148 Sum_probs=70.3
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCC
Q 012783 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402 (456)
Q Consensus 323 ~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~ 402 (456)
..+...++..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++++..|+.++|+++.+|+.... +
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~ 247 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPL---P 247 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCC---S
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCC---C
Confidence 445566677788999999999999999999985 4579999999 9999999999999998767999999986521 2
Q ss_pred CCccEEEEc
Q 012783 403 VKCDKVLLD 411 (456)
Q Consensus 403 ~~fD~VllD 411 (456)
..||.|++.
T Consensus 248 ~~~D~v~~~ 256 (360)
T 1tw3_A 248 RKADAIILS 256 (360)
T ss_dssp SCEEEEEEE
T ss_pred CCccEEEEc
Confidence 359999884
No 242
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.34 E-value=1.8e-06 Score=86.75 Aligned_cols=87 Identities=17% Similarity=0.182 Sum_probs=72.6
Q ss_pred hHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc
Q 012783 320 ESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (456)
Q Consensus 320 ~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~ 399 (456)
.....++..++..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++++..|+.++|+++.+|+...+.
T Consensus 177 ~~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 254 (359)
T 1x19_A 177 FAIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY 254 (359)
T ss_dssp HHHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC
T ss_pred hhHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC
Confidence 444556667777888999999999999999999985 4579999999 99999999999999998889999999976532
Q ss_pred cCCCCccEEEEc
Q 012783 400 NSTVKCDKVLLD 411 (456)
Q Consensus 400 ~~~~~fD~VllD 411 (456)
..+|.|++.
T Consensus 255 ---~~~D~v~~~ 263 (359)
T 1x19_A 255 ---PEADAVLFC 263 (359)
T ss_dssp ---CCCSEEEEE
T ss_pred ---CCCCEEEEe
Confidence 234998874
No 243
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.33 E-value=5.1e-07 Score=80.17 Aligned_cols=73 Identities=22% Similarity=0.229 Sum_probs=59.1
Q ss_pred HhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCcc
Q 012783 327 AVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCD 406 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD 406 (456)
..+.+.++.+|||+|||+|..+..+++.. .+|+++|+++.+++.++++ .++ +.++.+| .. ...++||
T Consensus 11 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-----~~~-v~~~~~d-~~---~~~~~~D 77 (170)
T 3i9f_A 11 PNIFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK-----FDS-VITLSDP-KE---IPDNSVD 77 (170)
T ss_dssp HHHHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH-----CTT-SEEESSG-GG---SCTTCEE
T ss_pred HhcCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh-----CCC-cEEEeCC-CC---CCCCceE
Confidence 34457788999999999999999998864 4999999999999999887 333 7899999 22 2246899
Q ss_pred EEEEcC
Q 012783 407 KVLLDA 412 (456)
Q Consensus 407 ~VllDa 412 (456)
.|++..
T Consensus 78 ~v~~~~ 83 (170)
T 3i9f_A 78 FILFAN 83 (170)
T ss_dssp EEEEES
T ss_pred EEEEcc
Confidence 999753
No 244
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.30 E-value=1.9e-06 Score=86.07 Aligned_cols=84 Identities=14% Similarity=0.101 Sum_probs=70.1
Q ss_pred HHHhcCCCC-CCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCC
Q 012783 325 VVAVVDPQP-GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 403 (456)
Q Consensus 325 v~~~l~~~~-g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~ 403 (456)
++..++..+ +.+|||+|||+|..+..+++..+ ..+++++|+ +..++.+++++...++.++|+++.+|+...+.....
T Consensus 170 ~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 247 (352)
T 3mcz_A 170 VVSELGVFARARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGG 247 (352)
T ss_dssp HHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTC
T ss_pred HHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCC
Confidence 344455556 88999999999999999998864 589999999 889999999999999988899999999876422335
Q ss_pred CccEEEE
Q 012783 404 KCDKVLL 410 (456)
Q Consensus 404 ~fD~Vll 410 (456)
.||+|++
T Consensus 248 ~~D~v~~ 254 (352)
T 3mcz_A 248 AADVVML 254 (352)
T ss_dssp CEEEEEE
T ss_pred CccEEEE
Confidence 7999998
No 245
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.30 E-value=1.5e-06 Score=85.50 Aligned_cols=78 Identities=13% Similarity=0.024 Sum_probs=61.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcC------CCceEEEEeccccccc----cc-
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ------VNSVIRTIHADLRTFA----DN- 400 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g------~~~~V~~~~~Da~~~~----~~- 400 (456)
.++.+|||+|||+|..+..+++. +..+|+++|+++.+++.++++....+ ....+.++++|+..++ ..
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 110 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRD 110 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSS
T ss_pred CCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhccc
Confidence 36889999999999999999874 46799999999999999999987652 1224899999998764 11
Q ss_pred CCCCccEEEEc
Q 012783 401 STVKCDKVLLD 411 (456)
Q Consensus 401 ~~~~fD~VllD 411 (456)
..++||+|++.
T Consensus 111 ~~~~fD~V~~~ 121 (313)
T 3bgv_A 111 PQMCFDICSCQ 121 (313)
T ss_dssp TTCCEEEEEEE
T ss_pred CCCCEEEEEEe
Confidence 13589999974
No 246
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.30 E-value=7.5e-07 Score=85.07 Aligned_cols=69 Identities=19% Similarity=0.228 Sum_probs=58.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEc
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllD 411 (456)
.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++. + +.++++|+..++. .++||+|++.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~-----~-~~~~~~d~~~~~~--~~~fD~v~~~ 117 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP-----D-AVLHHGDMRDFSL--GRRFSAVTCM 117 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT-----T-SEEEECCTTTCCC--SCCEEEEEEC
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC-----C-CEEEECChHHCCc--cCCcCEEEEc
Confidence 35789999999999999999875 3589999999999999988743 3 7889999988654 4789999985
No 247
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.29 E-value=7.6e-07 Score=82.20 Aligned_cols=78 Identities=8% Similarity=-0.029 Sum_probs=59.7
Q ss_pred HHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccc---cccCC
Q 012783 326 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF---ADNST 402 (456)
Q Consensus 326 ~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~---~~~~~ 402 (456)
...+...++.+|||+|||+|..+..+++. ..+|+++|+++.+++.++++ . .+.+..+|+..+ +....
T Consensus 45 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~-~~~~~~~~~~~~~~~~~~~~ 114 (227)
T 3e8s_A 45 LLAILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA------G-AGEVHLASYAQLAEAKVPVG 114 (227)
T ss_dssp HHHHHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT------C-SSCEEECCHHHHHTTCSCCC
T ss_pred HHHhhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh------c-ccccchhhHHhhcccccccC
Confidence 34444556799999999999999999876 46899999999999999887 2 256778887766 22333
Q ss_pred CCccEEEEcCC
Q 012783 403 VKCDKVLLDAP 413 (456)
Q Consensus 403 ~~fD~VllDaP 413 (456)
.+||.|++...
T Consensus 115 ~~fD~v~~~~~ 125 (227)
T 3e8s_A 115 KDYDLICANFA 125 (227)
T ss_dssp CCEEEEEEESC
T ss_pred CCccEEEECch
Confidence 56999998543
No 248
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.28 E-value=1.1e-06 Score=82.93 Aligned_cols=69 Identities=12% Similarity=0.118 Sum_probs=56.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccc-ccCCCCccEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA-DNSTVKCDKVL 409 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~-~~~~~~fD~Vl 409 (456)
..++.+|||+|||+|..+..+++. ..+|+++|+++.+++.++++ +.++.+|+..+. ....++||+|+
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~ 106 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVM 106 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEE
Confidence 467899999999999999999886 45899999999999988876 567889987753 22347899999
Q ss_pred Ec
Q 012783 410 LD 411 (456)
Q Consensus 410 lD 411 (456)
+.
T Consensus 107 ~~ 108 (240)
T 3dli_A 107 IS 108 (240)
T ss_dssp EE
T ss_pred EC
Confidence 83
No 249
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.28 E-value=2.9e-06 Score=85.78 Aligned_cols=83 Identities=13% Similarity=0.005 Sum_probs=70.0
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCC
Q 012783 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402 (456)
Q Consensus 323 ~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~ 402 (456)
..++..++..++.+|||+|||+|..+..+++.. +..+++++|+ +..++.+++++...|+.++|+++.+|+... .+
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~---~p 266 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFET---IP 266 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTC---CC
T ss_pred HHHHHhCCCccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCC---CC
Confidence 345555677788999999999999999999985 4679999999 999999999999999877799999998731 22
Q ss_pred CCccEEEE
Q 012783 403 VKCDKVLL 410 (456)
Q Consensus 403 ~~fD~Vll 410 (456)
..||+|++
T Consensus 267 ~~~D~v~~ 274 (369)
T 3gwz_A 267 DGADVYLI 274 (369)
T ss_dssp SSCSEEEE
T ss_pred CCceEEEh
Confidence 37999988
No 250
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.28 E-value=1.5e-06 Score=81.93 Aligned_cols=79 Identities=14% Similarity=0.175 Sum_probs=62.1
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccC----CCCc
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS----TVKC 405 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~----~~~f 405 (456)
.+.++.+|||+|||+|..+..++... .+|+++|+++.+++.+++++ ... .+.++++|+..++... ...|
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~---~~v~gvD~s~~~~~~a~~~~---~~~-~~~~~~~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFF---PRVIGLDVSKSALEIAAKEN---TAA-NISYRLLDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHS---SCEEEEESCHHHHHHHHHHS---CCT-TEEEEECCTTCHHHHHHHHHHHCS
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhC---CCEEEEECCHHHHHHHHHhC---ccc-CceEEECcccccccccccccccCc
Confidence 35788999999999999999999874 38999999999999999876 233 3899999998754321 1248
Q ss_pred cEEEEcCCCC
Q 012783 406 DKVLLDAPCS 415 (456)
Q Consensus 406 D~VllDaPCS 415 (456)
|+|++.....
T Consensus 126 d~v~~~~~~~ 135 (245)
T 3ggd_A 126 ANIYMRTGFH 135 (245)
T ss_dssp CEEEEESSST
T ss_pred cEEEEcchhh
Confidence 9999875443
No 251
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.25 E-value=5.5e-07 Score=86.86 Aligned_cols=67 Identities=16% Similarity=0.150 Sum_probs=55.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
.+.+|||+|||+|..+..+++. ..+|+|+|+|+.+++.+++ ..+ |.++++|+..++.. +++||+|++
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~------~~~-v~~~~~~~e~~~~~-~~sfD~v~~ 105 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR------HPR-VTYAVAPAEDTGLP-PASVDVAIA 105 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC------CTT-EEEEECCTTCCCCC-SSCEEEEEE
T ss_pred CCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh------cCC-ceeehhhhhhhccc-CCcccEEEE
Confidence 4579999999999999999875 4689999999999987643 233 89999999887543 478999997
No 252
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.24 E-value=1.8e-06 Score=84.03 Aligned_cols=80 Identities=9% Similarity=0.074 Sum_probs=56.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcC---CCceE--EEEeCCHHHHHHHHHHHHHc-CCCc-eEEEEecccccccc----
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLS---GQGLV--YAIDINKGRLRILNETAKLH-QVNS-VIRTIHADLRTFAD---- 399 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~---~~g~V--~AvDis~~rl~~l~~n~~r~-g~~~-~V~~~~~Da~~~~~---- 399 (456)
+.++.+|||+|||+|..+..++..+. +...| +++|+|+++++.+++++... ++.+ .+.+..+|+..+..
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 45778999999999998876554331 34544 99999999999999998764 5554 23445666655431
Q ss_pred -cCCCCccEEEE
Q 012783 400 -NSTVKCDKVLL 410 (456)
Q Consensus 400 -~~~~~fD~Vll 410 (456)
...++||+|++
T Consensus 130 ~~~~~~fD~V~~ 141 (292)
T 2aot_A 130 KKELQKWDFIHM 141 (292)
T ss_dssp TTCCCCEEEEEE
T ss_pred ccCCCceeEEEE
Confidence 12468999987
No 253
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.24 E-value=1.6e-06 Score=85.98 Aligned_cols=95 Identities=14% Similarity=0.120 Sum_probs=73.4
Q ss_pred cccccccccchHHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEE
Q 012783 310 LKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRT 389 (456)
Q Consensus 310 ~~~G~~~vQd~ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~ 389 (456)
|..+. ..+......+...++..+ .+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...|+.++|++
T Consensus 146 f~~~m-~~~~~~~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~ 221 (334)
T 2ip2_A 146 FLLAM-KASNLAFHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLAGERVSL 221 (334)
T ss_dssp HHHHH-GGGHHHHHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEE
T ss_pred HHHHH-HHHHHHHHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEE
Confidence 44444 343333444455556666 899999999999999999986 4579999999 9999999999988887767999
Q ss_pred EecccccccccCCCCccEEEEc
Q 012783 390 IHADLRTFADNSTVKCDKVLLD 411 (456)
Q Consensus 390 ~~~Da~~~~~~~~~~fD~VllD 411 (456)
+.+|+.. + .+..||.|++.
T Consensus 222 ~~~d~~~-~--~~~~~D~v~~~ 240 (334)
T 2ip2_A 222 VGGDMLQ-E--VPSNGDIYLLS 240 (334)
T ss_dssp EESCTTT-C--CCSSCSEEEEE
T ss_pred ecCCCCC-C--CCCCCCEEEEc
Confidence 9999876 2 22579999973
No 254
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.23 E-value=3.4e-06 Score=78.73 Aligned_cols=68 Identities=15% Similarity=0.190 Sum_probs=57.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
.++.+|||+|||+|..+..+++.. .+|+++|+++.+++.++++. .+ +.++++|+..++. .++||+|++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~-----~~-~~~~~~d~~~~~~--~~~~D~v~~ 106 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL-----PD-ATLHQGDMRDFRL--GRKFSAVVS 106 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC-----TT-CEEEECCTTTCCC--SSCEEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC-----CC-CEEEECCHHHccc--CCCCcEEEE
Confidence 568899999999999999999873 38999999999999998864 33 7889999987653 468999995
No 255
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.23 E-value=2.6e-06 Score=81.54 Aligned_cols=72 Identities=13% Similarity=0.140 Sum_probs=59.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEc
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllD 411 (456)
.++.+|||+|||+|..+..+++.+ +.+.|+++|+++.+++.++++. .+ +.++.+|+..++.. .++||.|++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~-----~~-~~~~~~d~~~~~~~-~~~fD~v~~~ 155 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY-----PQ-VTFCVASSHRLPFS-DTSMDAIIRI 155 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC-----TT-SEEEECCTTSCSBC-TTCEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC-----CC-cEEEEcchhhCCCC-CCceeEEEEe
Confidence 578999999999999999999876 3569999999999999988763 23 67889998776532 3689999863
No 256
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.22 E-value=9.4e-07 Score=89.15 Aligned_cols=78 Identities=19% Similarity=0.152 Sum_probs=60.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
+.+|++|||+||+|||+|..++++ .++|+|||+.+- - ..+. ..+ .|+++.+|+..+... ..+||.|++
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l-~----~~l~--~~~-~V~~~~~d~~~~~~~-~~~~D~vvs 276 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPM-A----QSLM--DTG-QVTWLREDGFKFRPT-RSNISWMVC 276 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCC-C----HHHH--TTT-CEEEECSCTTTCCCC-SSCEEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhc-C----hhhc--cCC-CeEEEeCccccccCC-CCCcCEEEE
Confidence 568999999999999999999886 589999997641 1 1111 233 489999999877543 368999999
Q ss_pred cCCCCCCccc
Q 012783 411 DAPCSGLGVL 420 (456)
Q Consensus 411 DaPCSg~G~i 420 (456)
|.-|.-.|+.
T Consensus 277 Dm~~~p~~~~ 286 (375)
T 4auk_A 277 DMVEKPAKVA 286 (375)
T ss_dssp CCSSCHHHHH
T ss_pred cCCCChHHhH
Confidence 9999877764
No 257
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.22 E-value=3.4e-06 Score=80.36 Aligned_cols=71 Identities=17% Similarity=0.220 Sum_probs=59.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
.+..+|||+|||.|-.++.+. +..+++|+|+++.+++.+++++.++|.+ ..+..+|....+. +++||.||+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~~--~~~~v~D~~~~~~--~~~~DvvLl 174 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDWD--FTFALQDVLCAPP--AEAGDLALI 174 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTCE--EEEEECCTTTSCC--CCBCSEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeecccCCC--CCCcchHHH
Confidence 457899999999999888766 5789999999999999999999999964 6788889865432 357898865
No 258
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.21 E-value=2e-06 Score=94.29 Aligned_cols=85 Identities=15% Similarity=0.153 Sum_probs=63.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcC--CCceEEEEeCCHHHHHHH--HHHHHH----cCCCceEEEEecccccccccCCC
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLS--GQGLVYAIDINKGRLRIL--NETAKL----HQVNSVIRTIHADLRTFADNSTV 403 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~--~~g~V~AvDis~~rl~~l--~~n~~r----~g~~~~V~~~~~Da~~~~~~~~~ 403 (456)
.++.+|||.|||+|+..+.++..++ ....|+|+|+++..+..+ +.|+.. .|+.+ ..+...|..........
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~-~~I~~dD~L~~~~~~~~ 398 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNA-PTITGEDVCSLNPEDFA 398 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBC-CEEECCCGGGCCGGGGT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCc-ceEEecchhcccccccC
Confidence 4688999999999999999998764 236899999999999999 666554 34433 34556666553222236
Q ss_pred CccEEEEcCCCCCC
Q 012783 404 KCDKVLLDAPCSGL 417 (456)
Q Consensus 404 ~fD~VllDaPCSg~ 417 (456)
+||+|+.+||.++.
T Consensus 399 kFDVVIgNPPYg~~ 412 (878)
T 3s1s_A 399 NVSVVVMNPPYVSG 412 (878)
T ss_dssp TEEEEEECCBCCSS
T ss_pred CCCEEEECCCcccc
Confidence 89999999999753
No 259
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.19 E-value=2.3e-06 Score=78.61 Aligned_cols=68 Identities=18% Similarity=0.103 Sum_probs=55.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEcC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 412 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllDa 412 (456)
++.+|||+|||+|..+..+ +..+|+++|+++.+++.++++. .+ +.++++|+..++. ..++||.|++..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----~~-~~~~~~d~~~~~~-~~~~fD~v~~~~ 103 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----PE-ATWVRAWGEALPF-PGESFDVVLLFT 103 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----TT-SEEECCCTTSCCS-CSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----CC-cEEEEcccccCCC-CCCcEEEEEEcC
Confidence 7899999999999988766 2238999999999999998876 33 6789999987653 246899999853
No 260
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.19 E-value=1.6e-06 Score=83.76 Aligned_cols=74 Identities=7% Similarity=-0.138 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--CC-CceEEEEecccccccccCCCCccEEE
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV-NSVIRTIHADLRTFADNSTVKCDKVL 409 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~--g~-~~~V~~~~~Da~~~~~~~~~~fD~Vl 409 (456)
.+.+|||+|||.|+.+..++.. + ++|+++|+++.+++.+++++... ++ ..+++++.+|+..+. ++||+|+
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----~~fD~Ii 144 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----KKYDLIF 144 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----CCEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----hhCCEEE
Confidence 4689999999999999998876 4 89999999999999999876432 12 235899999998764 5899999
Q ss_pred EcCC
Q 012783 410 LDAP 413 (456)
Q Consensus 410 lDaP 413 (456)
+|++
T Consensus 145 ~d~~ 148 (262)
T 2cmg_A 145 CLQE 148 (262)
T ss_dssp ESSC
T ss_pred ECCC
Confidence 9953
No 261
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.18 E-value=4.9e-06 Score=83.85 Aligned_cols=77 Identities=13% Similarity=0.058 Sum_probs=65.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
..+.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...|+.++|+++.+|+.......++.||+|++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~ 254 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWM 254 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEE
Confidence 457899999999999999999985 4579999999 9999999999999998777999999997642011258999987
No 262
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.14 E-value=4.9e-06 Score=79.46 Aligned_cols=69 Identities=16% Similarity=0.151 Sum_probs=56.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEcC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 412 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllDa 412 (456)
++.+|||+|||+|..+..+++. ..+|+++|+++.+++.++++.. .+ ++.+|+..++. ..++||.|++..
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~----~~---~~~~d~~~~~~-~~~~fD~v~~~~ 122 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV----KN---VVEAKAEDLPF-PSGAFEAVLALG 122 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC----SC---EEECCTTSCCS-CTTCEEEEEECS
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC----CC---EEECcHHHCCC-CCCCEEEEEEcc
Confidence 7899999999999999999875 4689999999999999988753 22 67889877653 246899999753
No 263
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.13 E-value=8.6e-07 Score=85.22 Aligned_cols=80 Identities=14% Similarity=0.077 Sum_probs=57.7
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcC--C------------------------
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ--V------------------------ 383 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g--~------------------------ 383 (456)
.+.+|.+|||+|||+|..+..++.. +...|+|+|+|+.+++.++++++... +
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 4567899999999999887766543 23479999999999999999876532 1
Q ss_pred --CceEE-EEecccccccc---cCCCCccEEEEc
Q 012783 384 --NSVIR-TIHADLRTFAD---NSTVKCDKVLLD 411 (456)
Q Consensus 384 --~~~V~-~~~~Da~~~~~---~~~~~fD~VllD 411 (456)
...|. ++.+|+..... ...++||+|++-
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~ 163 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTL 163 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEE
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeeh
Confidence 01233 78899876321 123589999983
No 264
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.13 E-value=6.4e-06 Score=81.66 Aligned_cols=77 Identities=10% Similarity=0.030 Sum_probs=65.2
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEE
Q 012783 329 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKV 408 (456)
Q Consensus 329 l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~V 408 (456)
++..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++++...++.++|+++.+|+... .+..||+|
T Consensus 165 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~p~~~D~v 239 (332)
T 3i53_A 165 YDWAALGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDP---LPAGAGGY 239 (332)
T ss_dssp SCCGGGSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC---CCCSCSEE
T ss_pred CCCCCCCEEEEeCCChhHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCC---CCCCCcEE
Confidence 3445678999999999999999999864 578999999 999999999999999877799999998631 12379999
Q ss_pred EE
Q 012783 409 LL 410 (456)
Q Consensus 409 ll 410 (456)
++
T Consensus 240 ~~ 241 (332)
T 3i53_A 240 VL 241 (332)
T ss_dssp EE
T ss_pred EE
Confidence 97
No 265
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.12 E-value=2.5e-06 Score=82.21 Aligned_cols=73 Identities=19% Similarity=0.099 Sum_probs=60.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
+..+|||+|||.|-.++.++.. .+..+++|+|+|+.+++.+++|+.++|+. ..+...|...-+ ..++||+||+
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~-~p~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~--p~~~~DvaL~ 204 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGL-PAETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDR--LDEPADVTLL 204 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTC-CTTCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSC--CCSCCSEEEE
T ss_pred CCceeeeeccCccHHHHHHHhh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccC--CCCCcchHHH
Confidence 3679999999999999988775 46789999999999999999999999997 567788875432 3467898876
No 266
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.12 E-value=1.1e-06 Score=83.55 Aligned_cols=80 Identities=16% Similarity=0.099 Sum_probs=60.8
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCC--------------------------
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV-------------------------- 383 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~-------------------------- 383 (456)
...++.+|||+|||+|..+..++... ...|+++|+++.+++.++++++..+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACES--FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEE 130 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcc--cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHH
Confidence 34578899999999999998887642 25899999999999999998865431
Q ss_pred --CceE-EEEecccccccccCC---CCccEEEEc
Q 012783 384 --NSVI-RTIHADLRTFADNST---VKCDKVLLD 411 (456)
Q Consensus 384 --~~~V-~~~~~Da~~~~~~~~---~~fD~VllD 411 (456)
...+ .++.+|+........ ++||+|++.
T Consensus 131 ~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~ 164 (265)
T 2i62_A 131 KLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLST 164 (265)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEE
T ss_pred HhhhhheeEEEeeeccCCCCCccccCCccEEEEh
Confidence 0126 789999877543223 689999973
No 267
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.11 E-value=1.2e-06 Score=83.60 Aligned_cols=78 Identities=18% Similarity=0.170 Sum_probs=52.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHH--cCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEec-ccccccccCCCCcc
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASC--LSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVKCD 406 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~--~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~-Da~~~~~~~~~~fD 406 (456)
++||++|+|+||||||++..++++ ++. .|.|+|+|+...-+.. .-.|+ +.+++..+ |++.+. ..++|
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~-----~~~Gv-~~i~~~~G~Df~~~~---~~~~D 141 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM-----QSYGW-NIVTMKSGVDVFYKP---SEISD 141 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC-----CSTTG-GGEEEECSCCGGGSC---CCCCS
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc-----cCCCc-eEEEeeccCCccCCC---CCCCC
Confidence 578999999999999999999987 433 4677888831100000 00233 33566667 987643 35899
Q ss_pred EEEEc-CCCCCCcc
Q 012783 407 KVLLD-APCSGLGV 419 (456)
Q Consensus 407 ~VllD-aPCSg~G~ 419 (456)
.||+| +| + +|.
T Consensus 142 vVLSDMAP-n-SG~ 153 (269)
T 2px2_A 142 TLLCDIGE-S-SPS 153 (269)
T ss_dssp EEEECCCC-C-CSC
T ss_pred EEEeCCCC-C-CCc
Confidence 99999 56 4 565
No 268
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.08 E-value=4.4e-06 Score=77.16 Aligned_cols=75 Identities=13% Similarity=0.141 Sum_probs=57.6
Q ss_pred HHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc-cCCCC
Q 012783 326 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-NSTVK 404 (456)
Q Consensus 326 ~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~-~~~~~ 404 (456)
...+. .++.+|||+|||+|..+..+++. + .+|+++|+++.+++.++++. ..++.+|+..+.. ...++
T Consensus 26 ~~~~~-~~~~~vLdiG~G~G~~~~~l~~~--~-~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~ 93 (230)
T 3cc8_A 26 LKHIK-KEWKEVLDIGCSSGALGAAIKEN--G-TRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQ 93 (230)
T ss_dssp HTTCC-TTCSEEEEETCTTSHHHHHHHTT--T-CEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTC
T ss_pred HHHhc-cCCCcEEEeCCCCCHHHHHHHhc--C-CeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCc
Confidence 34444 67899999999999999999886 3 79999999999999887653 2467888865322 22368
Q ss_pred ccEEEEcC
Q 012783 405 CDKVLLDA 412 (456)
Q Consensus 405 fD~VllDa 412 (456)
||.|++..
T Consensus 94 fD~v~~~~ 101 (230)
T 3cc8_A 94 FDCVIFGD 101 (230)
T ss_dssp EEEEEEES
T ss_pred cCEEEECC
Confidence 99999853
No 269
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.07 E-value=1.5e-06 Score=84.64 Aligned_cols=78 Identities=12% Similarity=0.098 Sum_probs=63.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc---cCCCCccEEE
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---NSTVKCDKVL 409 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---~~~~~fD~Vl 409 (456)
.+..+||+.+|+|..++.+.+ +..+++.+|.++..++.+++|++. ..++++++.|+..... ....+||+||
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS---~~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~~~~fdLVf 164 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR---SQDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPPPEKRGLIF 164 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC---TTSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSCTTSCEEEE
T ss_pred cCCCceeEeCCcHHHHHHHcC---CCCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCCCCCccEEE
Confidence 467799999999999998776 357999999999999999999875 3458999999865332 1234799999
Q ss_pred EcCCCCC
Q 012783 410 LDAPCSG 416 (456)
Q Consensus 410 lDaPCSg 416 (456)
+|||.--
T Consensus 165 iDPPYe~ 171 (283)
T 2oo3_A 165 IDPSYER 171 (283)
T ss_dssp ECCCCCS
T ss_pred ECCCCCC
Confidence 9999973
No 270
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.97 E-value=1e-05 Score=76.30 Aligned_cols=82 Identities=18% Similarity=0.169 Sum_probs=58.2
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEec-ccccccccCCCCccEE
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVKCDKV 408 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~-Da~~~~~~~~~~fD~V 408 (456)
.+++++.|+|+||||||++..++.+. +...|+|+|+-..-.+. -...+.+|.. .|++..+ |...++. .++|.|
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~-g~~~V~avdvG~~ghe~-P~~~~s~gwn-~v~fk~gvDv~~~~~---~~~Dtl 148 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLK-KVTEVRGYTKGGPGHEE-PVPMSTYGWN-IVKLMSGKDVFYLPP---EKCDTL 148 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTST-TEEEEEEECCCSTTSCC-CCCCCCTTTT-SEEEECSCCGGGCCC---CCCSEE
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhc-CCCEEEEEecCCCCccC-cchhhhcCcC-ceEEEeccceeecCC---ccccEE
Confidence 45789999999999999999888764 44589999996542210 0001234554 4899999 9765543 579999
Q ss_pred EEc-CCCCCC
Q 012783 409 LLD-APCSGL 417 (456)
Q Consensus 409 llD-aPCSg~ 417 (456)
+|| +|.|+.
T Consensus 149 lcDIgeSs~~ 158 (267)
T 3p8z_A 149 LCDIGESSPS 158 (267)
T ss_dssp EECCCCCCSC
T ss_pred EEecCCCCCC
Confidence 999 675555
No 271
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.97 E-value=2.7e-05 Score=76.34 Aligned_cols=82 Identities=21% Similarity=0.184 Sum_probs=54.5
Q ss_pred cCCC-CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc-c-CCCCc
Q 012783 329 VDPQ-PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-N-STVKC 405 (456)
Q Consensus 329 l~~~-~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~-~-~~~~f 405 (456)
+.+. +|.+|||+|||||+.|..+++. +.++|+|+|+++.+++...++ -...+.....|+..+.. . ....|
T Consensus 80 ~~~~~~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~~mL~~a~r~-----~~rv~~~~~~ni~~l~~~~l~~~~f 152 (291)
T 3hp7_A 80 FNLSVEDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGTNQLVWKLRQ-----DDRVRSMEQYNFRYAEPVDFTEGLP 152 (291)
T ss_dssp TTCCCTTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSSSCSCHHHHT-----CTTEEEECSCCGGGCCGGGCTTCCC
T ss_pred cCCCccccEEEecCCCccHHHHHHHhC--CCCEEEEEECCHHHHHHHHHh-----CcccceecccCceecchhhCCCCCC
Confidence 3443 5789999999999999999886 457999999999999874322 11112222334443322 1 12349
Q ss_pred cEEEEcCCCCCC
Q 012783 406 DKVLLDAPCSGL 417 (456)
Q Consensus 406 D~VllDaPCSg~ 417 (456)
|.|++|.-...+
T Consensus 153 D~v~~d~sf~sl 164 (291)
T 3hp7_A 153 SFASIDVSFISL 164 (291)
T ss_dssp SEEEECCSSSCG
T ss_pred CEEEEEeeHhhH
Confidence 999999876543
No 272
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.97 E-value=9.4e-06 Score=79.00 Aligned_cols=78 Identities=17% Similarity=0.107 Sum_probs=56.7
Q ss_pred CCCeEEEEcCCCch----HHHHHHHHcCC---CceEEEEeCCHHHHHHHHHHHH--------------Hc---------C
Q 012783 333 PGQSIVDCCAAPGG----KTLYMASCLSG---QGLVYAIDINKGRLRILNETAK--------------LH---------Q 382 (456)
Q Consensus 333 ~g~~VLDlcAGpGg----kt~~la~~~~~---~g~V~AvDis~~rl~~l~~n~~--------------r~---------g 382 (456)
++.+|||+|||+|- .++.+++.++. ..+|+|+|+|+.+++.+++++- ++ |
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 56667776542 3589999999999999998741 10 0
Q ss_pred ---C----CceEEEEecccccccccCCCCccEEEE
Q 012783 383 ---V----NSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 383 ---~----~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
+ .+.|.+.++|....+....++||+|+|
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~c 219 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFC 219 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEE
Confidence 1 124889999987632221368999998
No 273
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.94 E-value=8.3e-06 Score=83.25 Aligned_cols=70 Identities=23% Similarity=0.200 Sum_probs=55.0
Q ss_pred CCCeEEEEcCC------CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc-----C
Q 012783 333 PGQSIVDCCAA------PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-----S 401 (456)
Q Consensus 333 ~g~~VLDlcAG------pGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~-----~ 401 (456)
++.+|||+||| +|+.++.++....+.++|+++|+++.+. .... +|+++++|+..++.. .
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~-rI~fv~GDa~dlpf~~~l~~~ 285 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDEL-RIRTIQGDQNDAEFLDRIARR 285 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBT-TEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCC-CcEEEEecccccchhhhhhcc
Confidence 46899999999 7888998888765678999999999972 1233 489999999875432 0
Q ss_pred CCCccEEEEcC
Q 012783 402 TVKCDKVLLDA 412 (456)
Q Consensus 402 ~~~fD~VllDa 412 (456)
.++||+|++|.
T Consensus 286 d~sFDlVisdg 296 (419)
T 3sso_A 286 YGPFDIVIDDG 296 (419)
T ss_dssp HCCEEEEEECS
T ss_pred cCCccEEEECC
Confidence 36899999874
No 274
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.91 E-value=1.9e-05 Score=80.22 Aligned_cols=81 Identities=17% Similarity=0.336 Sum_probs=60.8
Q ss_pred CeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc-------CCCCccE
Q 012783 335 QSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-------STVKCDK 407 (456)
Q Consensus 335 ~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~-------~~~~fD~ 407 (456)
.+|+|+|||.||.++-+.+. +-..|+|+|+++..++..+.|.. + ..++++|+..+... ....+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~~-----~-~~~~~~DI~~~~~~~~~~~~~~~~~~D~ 74 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINFP-----R-SLHVQEDVSLLNAEIIKGFFKNDMPIDG 74 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHCT-----T-SEEECCCGGGCCHHHHHHHHCSCCCCCE
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhCC-----C-CceEecChhhcCHHHHHhhcccCCCeeE
Confidence 47999999999999988775 34567899999999999988842 3 45778998776321 1357999
Q ss_pred EEEcCCCCCCcccccC
Q 012783 408 VLLDAPCSGLGVLSKT 423 (456)
Q Consensus 408 VllDaPCSg~G~irr~ 423 (456)
|+.+|||.+.-...++
T Consensus 75 i~ggpPCQ~fS~ag~~ 90 (376)
T 3g7u_A 75 IIGGPPCQGFSSIGKG 90 (376)
T ss_dssp EEECCCCCTTC-----
T ss_pred EEecCCCCCcccccCC
Confidence 9999999988777654
No 275
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.91 E-value=2.7e-05 Score=77.65 Aligned_cols=80 Identities=21% Similarity=0.353 Sum_probs=63.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEcCC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAP 413 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllDaP 413 (456)
+.+|+|+|||.||.++.+.+. +-..|+++|+++..++..+.|.... .++|+..+....-..+|+|+.+||
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a--G~~~v~~~e~d~~a~~t~~~N~~~~--------~~~Di~~~~~~~~~~~D~l~~gpP 80 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC--GAECVYSNEWDKYAQEVYEMNFGEK--------PEGDITQVNEKTIPDHDILCAGFP 80 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEECCCHHHHHHHHHHHSCC--------CBSCGGGSCGGGSCCCSEEEEECC
T ss_pred CCcEEEECCCcCHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCC--------CcCCHHHcCHhhCCCCCEEEECCC
Confidence 568999999999999988764 4557899999999999999996421 168887765433346999999999
Q ss_pred CCCCcccccC
Q 012783 414 CSGLGVLSKT 423 (456)
Q Consensus 414 CSg~G~irr~ 423 (456)
|.+.-..+++
T Consensus 81 CQ~fS~ag~~ 90 (327)
T 2c7p_A 81 CQAFSISGKQ 90 (327)
T ss_dssp CTTTCTTSCC
T ss_pred CCCcchhccc
Confidence 9888776654
No 276
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=97.90 E-value=4.4e-05 Score=73.98 Aligned_cols=75 Identities=13% Similarity=0.028 Sum_probs=56.6
Q ss_pred CCCCeEEEEcCCC---chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccc---------c
Q 012783 332 QPGQSIVDCCAAP---GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA---------D 399 (456)
Q Consensus 332 ~~g~~VLDlcAGp---Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~---------~ 399 (456)
.+..+|||+|||+ |..+..+++. .+.++|+++|+|+.+++.+++++.. ..++.++.+|+.... .
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~-~p~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~ 151 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSV-NPDARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDPEYILNHPDVRR 151 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHH
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHh-CCCCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhc
Confidence 3458999999999 9876555544 4568999999999999999998743 234899999997532 1
Q ss_pred -cCCCCccEEEE
Q 012783 400 -NSTVKCDKVLL 410 (456)
Q Consensus 400 -~~~~~fD~Vll 410 (456)
....+||.|++
T Consensus 152 ~~d~~~~d~v~~ 163 (274)
T 2qe6_A 152 MIDFSRPAAIML 163 (274)
T ss_dssp HCCTTSCCEEEE
T ss_pred cCCCCCCEEEEE
Confidence 11247899987
No 277
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.89 E-value=1.1e-05 Score=78.24 Aligned_cols=78 Identities=13% Similarity=0.146 Sum_probs=53.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc-----------------CCC----------
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-----------------QVN---------- 384 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~-----------------g~~---------- 384 (456)
.++.+|||+|||+|..+ .++... ...+|+++|+|+.+++.++++++.. |..
T Consensus 70 ~~~~~vLDiGcG~G~~~-~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 147 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQ-LLSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQL 147 (289)
T ss_dssp SCCSEEEEETCTTCCGG-GTTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHH
T ss_pred CCCCeEEEECCCcChHH-HHhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHH
Confidence 36889999999999943 333332 3469999999999999998866431 100
Q ss_pred --ceEEEEeccccc-ccc----cCCCCccEEEEc
Q 012783 385 --SVIRTIHADLRT-FAD----NSTVKCDKVLLD 411 (456)
Q Consensus 385 --~~V~~~~~Da~~-~~~----~~~~~fD~VllD 411 (456)
..+.++.+|+.. .+. ...++||+|++-
T Consensus 148 ~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~ 181 (289)
T 2g72_A 148 RARVKRVLPIDVHQPQPLGAGSPAPLPADALVSA 181 (289)
T ss_dssp HHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEE
T ss_pred HhhhceEEecccCCCCCccccccCCCCCCEEEeh
Confidence 125677788876 321 123569999974
No 278
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.84 E-value=5.8e-06 Score=78.38 Aligned_cols=78 Identities=21% Similarity=0.235 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccc-ccCCC-CccEEEE
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA-DNSTV-KCDKVLL 410 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~-~~~~~-~fD~Vll 410 (456)
+|.+|||+|||+|+.|..+++. +..+|+|+|+++.+++.++++..+.. ..-..++.... ..... .||.+.+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~--g~~~V~gvDis~~ml~~a~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN--GAKLVYALDVGTNQLAWKIRSDERVV-----VMEQFNFRNAVLADFEQGRPSFTSI 109 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSCCCCCHHHHTCTTEE-----EECSCCGGGCCGGGCCSCCCSEEEE
T ss_pred CCCEEEEEccCCCHHHHHHHhc--CCCEEEEEcCCHHHHHHHHHhCcccc-----ccccceEEEeCHhHcCcCCCCEEEE
Confidence 4779999999999999999986 34599999999999998666433221 11111222211 11112 3788888
Q ss_pred cCCCCCC
Q 012783 411 DAPCSGL 417 (456)
Q Consensus 411 DaPCSg~ 417 (456)
|...+..
T Consensus 110 D~v~~~l 116 (232)
T 3opn_A 110 DVSFISL 116 (232)
T ss_dssp CCSSSCG
T ss_pred EEEhhhH
Confidence 8877664
No 279
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.82 E-value=1.8e-05 Score=79.39 Aligned_cols=83 Identities=13% Similarity=0.243 Sum_probs=55.7
Q ss_pred CeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccC-C-CCccEEEEcC
Q 012783 335 QSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-T-VKCDKVLLDA 412 (456)
Q Consensus 335 ~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~-~-~~fD~VllDa 412 (456)
.+|+|++||.||.++.+.+.-.+...|+++|+++..++..+.|.. + ..++++|+..+.... . ..+|+|+.+|
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~-----~-~~~~~~Di~~~~~~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP-----H-TQLLAKTIEGITLEEFDRLSFDMILMSP 76 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----T-SCEECSCGGGCCHHHHHHHCCSEEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc-----c-cccccCCHHHccHhHcCcCCcCEEEEcC
Confidence 579999999999999888751002379999999999999999853 2 235788987764211 1 2699999999
Q ss_pred CCCCCcccccC
Q 012783 413 PCSGLGVLSKT 423 (456)
Q Consensus 413 PCSg~G~irr~ 423 (456)
||.+..+..++
T Consensus 77 PCq~fS~ag~~ 87 (343)
T 1g55_A 77 PCQPFTRIGRQ 87 (343)
T ss_dssp C----------
T ss_pred CCcchhhcCCc
Confidence 99888776554
No 280
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.78 E-value=9.8e-06 Score=82.87 Aligned_cols=80 Identities=10% Similarity=-0.022 Sum_probs=57.2
Q ss_pred HHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEE-EEecccccccccCC
Q 012783 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIR-TIHADLRTFADNST 402 (456)
Q Consensus 324 lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~-~~~~Da~~~~~~~~ 402 (456)
.+...+.+.++.+|||+|||+|..+..+++. ..+|+++|+++.+++.++++ ++..... +...++..++.. .
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~-~ 169 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRT-E 169 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHH-H
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccC-C
Confidence 3445566778999999999999999999875 45999999999999988765 5553221 223344333322 3
Q ss_pred CCccEEEEc
Q 012783 403 VKCDKVLLD 411 (456)
Q Consensus 403 ~~fD~VllD 411 (456)
++||+|++.
T Consensus 170 ~~fD~I~~~ 178 (416)
T 4e2x_A 170 GPANVIYAA 178 (416)
T ss_dssp CCEEEEEEE
T ss_pred CCEEEEEEC
Confidence 689999874
No 281
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.74 E-value=6.2e-05 Score=73.45 Aligned_cols=82 Identities=11% Similarity=0.080 Sum_probs=66.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcC----CCceEEEEeCCH--------------------------HHHHHHHHHHHHc
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLS----GQGLVYAIDINK--------------------------GRLRILNETAKLH 381 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~----~~g~V~AvDis~--------------------------~rl~~l~~n~~r~ 381 (456)
.....||++|++.|+.++.+++.+. +.++|+++|..+ .+++.+++|+++.
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 3456999999999999999998774 368999999642 1577899999999
Q ss_pred CCC-ceEEEEecccccccccC-CCCccEEEEcCC
Q 012783 382 QVN-SVIRTIHADLRTFADNS-TVKCDKVLLDAP 413 (456)
Q Consensus 382 g~~-~~V~~~~~Da~~~~~~~-~~~fD~VllDaP 413 (456)
|+. ++|+++.+|+.+..... .++||.|++|+-
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD 218 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD 218 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC
Confidence 994 67999999997643333 468999999985
No 282
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.74 E-value=2.3e-05 Score=72.60 Aligned_cols=64 Identities=9% Similarity=0.084 Sum_probs=51.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEcC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 412 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllDa 412 (456)
++.+|||+|||+|..+..++.. +++|+++.+++.++++ + +.++.+|+..++. ..++||+|++..
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~-------~-~~~~~~d~~~~~~-~~~~fD~v~~~~ 110 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR-------G-VFVLKGTAENLPL-KDESFDFALMVT 110 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT-------T-CEEEECBTTBCCS-CTTCEEEEEEES
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc-------C-CEEEEcccccCCC-CCCCeeEEEEcc
Confidence 3889999999999998877542 9999999999998886 2 6788899877653 246899999853
No 283
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.71 E-value=1.8e-05 Score=79.13 Aligned_cols=80 Identities=13% Similarity=0.073 Sum_probs=60.5
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCC
Q 012783 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402 (456)
Q Consensus 323 ~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~ 402 (456)
..++..++..++.+|||+|||+|..+..+++..+ ..+++++|++ ..+. +++++..++.++|+++.+|+.. ..+
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~~---~~p 246 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFLR---EVP 246 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTTT---CCC
T ss_pred HHHHHhCCccCCceEEEECCccCHHHHHHHHHCC-CCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCCC---CCC
Confidence 3455666777889999999999999999999864 5789999994 4444 4444445666679999999862 122
Q ss_pred CCccEEEE
Q 012783 403 VKCDKVLL 410 (456)
Q Consensus 403 ~~fD~Vll 410 (456)
.||+|++
T Consensus 247 -~~D~v~~ 253 (348)
T 3lst_A 247 -HADVHVL 253 (348)
T ss_dssp -CCSEEEE
T ss_pred -CCcEEEE
Confidence 7999987
No 284
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.70 E-value=2.7e-05 Score=75.67 Aligned_cols=63 Identities=11% Similarity=0.003 Sum_probs=52.7
Q ss_pred CCeEEEEcCCC--chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccc
Q 012783 334 GQSIVDCCAAP--GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 397 (456)
Q Consensus 334 g~~VLDlcAGp--Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~ 397 (456)
..+|||+|||+ |+.+..+++...+..+|+++|.|+.++..+++++...+. .++.++++|+..+
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~-~~~~~v~aD~~~~ 143 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPE-GRTAYVEADMLDP 143 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSS-SEEEEEECCTTCH
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCC-CcEEEEEecccCh
Confidence 47899999997 667788888777789999999999999999998865433 3489999999875
No 285
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.61 E-value=4.2e-05 Score=70.35 Aligned_cols=65 Identities=9% Similarity=0.037 Sum_probs=48.5
Q ss_pred HHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCC
Q 012783 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 403 (456)
Q Consensus 324 lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~ 403 (456)
++..+....++.+|||+|||+|..+..++ ..|+++|+++. + +.++.+|+..++. ..+
T Consensus 58 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~---------------~-~~~~~~d~~~~~~-~~~ 114 (215)
T 2zfu_A 58 IARDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL---------------D-PRVTVCDMAQVPL-EDE 114 (215)
T ss_dssp HHHHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS---------------S-TTEEESCTTSCSC-CTT
T ss_pred HHHHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC---------------C-ceEEEeccccCCC-CCC
Confidence 33333344678999999999999887662 68999999988 1 4577889877543 246
Q ss_pred CccEEEEc
Q 012783 404 KCDKVLLD 411 (456)
Q Consensus 404 ~fD~VllD 411 (456)
+||.|++.
T Consensus 115 ~fD~v~~~ 122 (215)
T 2zfu_A 115 SVDVAVFC 122 (215)
T ss_dssp CEEEEEEE
T ss_pred CEeEEEEe
Confidence 89999973
No 286
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.58 E-value=0.00013 Score=78.60 Aligned_cols=76 Identities=18% Similarity=0.219 Sum_probs=61.0
Q ss_pred CCeEEEEcCCCchH---HHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 334 GQSIVDCCAAPGGK---TLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 334 g~~VLDlcAGpGgk---t~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
+..|||+|||+|-. ++.+++..+...+|+|||.++ +...+++..+..|..++|+++++|++++. .++++|+|+.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~--LPEKVDIIVS 434 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWV--APEKADIIVS 434 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCC--CSSCEEEEEC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceecc--CCcccCEEEE
Confidence 35799999999988 666666544334799999997 56677788899999999999999999874 3478999987
Q ss_pred cC
Q 012783 411 DA 412 (456)
Q Consensus 411 Da 412 (456)
.-
T Consensus 435 Ew 436 (637)
T 4gqb_A 435 EL 436 (637)
T ss_dssp CC
T ss_pred Ec
Confidence 64
No 287
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.55 E-value=0.00014 Score=69.90 Aligned_cols=89 Identities=15% Similarity=0.122 Sum_probs=62.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHc------CCC-----ceEEEEeCCH---HHHH-----------HHHHHHHHc----
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCL------SGQ-----GLVYAIDINK---GRLR-----------ILNETAKLH---- 381 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~------~~~-----g~V~AvDis~---~rl~-----------~l~~n~~r~---- 381 (456)
..++.+|||+|+|+|..++.+++.. .+. .+++++|.++ +.+. .++++++.+
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 3456799999999999998887754 343 5899999887 4444 455665541
Q ss_pred ------CCC---ceEEEEecccccccccCCC----CccEEEEcC--CCCCCcccccCCCc
Q 012783 382 ------QVN---SVIRTIHADLRTFADNSTV----KCDKVLLDA--PCSGLGVLSKTCVG 426 (456)
Q Consensus 382 ------g~~---~~V~~~~~Da~~~~~~~~~----~fD~VllDa--PCSg~G~irr~p~~ 426 (456)
.+. .+++++.+|+.+....... .||.|++|+ |+ ++|+.
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~-------~~p~l 190 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPA-------KNPDM 190 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTT-------TCGGG
T ss_pred cchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcc-------cChhh
Confidence 121 2478999999875333322 799999997 44 47874
No 288
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.48 E-value=0.00025 Score=69.53 Aligned_cols=85 Identities=9% Similarity=0.142 Sum_probs=68.9
Q ss_pred hcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--C--CCceEEEEecccccccccCCC
Q 012783 328 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--Q--VNSVIRTIHADLRTFADNSTV 403 (456)
Q Consensus 328 ~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~--g--~~~~V~~~~~Da~~~~~~~~~ 403 (456)
.+.+. ..+||=+|.|-|+....++.. .+..+|+.||+++..++.+++.+... | -+.+++++.+|+..+.....+
T Consensus 79 ~~~p~-pk~VLIiGgGdG~~~revlk~-~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~ 156 (294)
T 3o4f_A 79 LAHGH-AKHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQ 156 (294)
T ss_dssp HHSSC-CCEEEEESCTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSC
T ss_pred hhCCC-CCeEEEECCCchHHHHHHHHc-CCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccc
Confidence 34443 579999999999999988875 34568999999999999999987543 2 124699999999998776678
Q ss_pred CccEEEEcCCC
Q 012783 404 KCDKVLLDAPC 414 (456)
Q Consensus 404 ~fD~VllDaPC 414 (456)
+||+|++|.+-
T Consensus 157 ~yDvIi~D~~d 167 (294)
T 3o4f_A 157 TFDVIISDCTD 167 (294)
T ss_dssp CEEEEEESCCC
T ss_pred cCCEEEEeCCC
Confidence 99999999874
No 289
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.41 E-value=0.00027 Score=70.83 Aligned_cols=84 Identities=13% Similarity=0.051 Sum_probs=64.1
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc
Q 012783 321 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN 400 (456)
Q Consensus 321 ss~lv~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~ 400 (456)
....++...+..+..+|+|+|||+|..+..+++..+ ..+++..|. +..++.+++++...+. .+|+++.+|+...+
T Consensus 167 ~~~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p-~~~~~~~dl-p~v~~~a~~~~~~~~~-~rv~~~~gD~~~~~-- 241 (353)
T 4a6d_A 167 NGRSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYP-GCKITVFDI-PEVVWTAKQHFSFQEE-EQIDFQEGDFFKDP-- 241 (353)
T ss_dssp HHHHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCS-SCEEEEEEC-HHHHHHHHHHSCC--C-CSEEEEESCTTTSC--
T ss_pred HHHHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCC-CceeEeccC-HHHHHHHHHhhhhccc-CceeeecCccccCC--
Confidence 334455566677788999999999999999999864 578888897 7889999888765554 45999999986532
Q ss_pred CCCCccEEEE
Q 012783 401 STVKCDKVLL 410 (456)
Q Consensus 401 ~~~~fD~Vll 410 (456)
...+|.|++
T Consensus 242 -~~~~D~~~~ 250 (353)
T 4a6d_A 242 -LPEADLYIL 250 (353)
T ss_dssp -CCCCSEEEE
T ss_pred -CCCceEEEe
Confidence 235788876
No 290
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.40 E-value=0.00022 Score=69.27 Aligned_cols=82 Identities=16% Similarity=0.107 Sum_probs=55.7
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEec-ccccccccCCCCccEE
Q 012783 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVKCDKV 408 (456)
Q Consensus 330 ~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~-Da~~~~~~~~~~fD~V 408 (456)
.+++++.|||+||||||++..++.+. +...|+|+|+-..--+. -...+.+|. +.|++..+ |+..+.. .++|.|
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~-gv~~V~avdvG~~~he~-P~~~~ql~w-~lV~~~~~~Dv~~l~~---~~~D~i 164 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQK-RVQEVRGYTKGGPGHEE-PQLVQSYGW-NIVTMKSGVDVFYRPS---ECCDTL 164 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCT-TEEEEEEECCCSTTSCC-CCCCCBTTG-GGEEEECSCCTTSSCC---CCCSEE
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhc-CCCEEEEEEcCCCCccC-cchhhhcCC-cceEEEeccCHhhCCC---CCCCEE
Confidence 35688999999999999999888764 34589999996541100 000012333 33788887 8766654 579999
Q ss_pred EEcCCCCCCc
Q 012783 409 LLDAPCSGLG 418 (456)
Q Consensus 409 llDaPCSg~G 418 (456)
+||.- -.+|
T Consensus 165 vcDig-eSs~ 173 (321)
T 3lkz_A 165 LCDIG-ESSS 173 (321)
T ss_dssp EECCC-CCCS
T ss_pred EEECc-cCCC
Confidence 99987 4344
No 291
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.32 E-value=0.0003 Score=76.13 Aligned_cols=79 Identities=11% Similarity=0.063 Sum_probs=59.9
Q ss_pred CCeEEEEcCCCchHHHHH---HHHcC---------CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc-
Q 012783 334 GQSIVDCCAAPGGKTLYM---ASCLS---------GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN- 400 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~l---a~~~~---------~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~- 400 (456)
+..|||+|||+|-.+... ++..+ ...+|+|||.++..+..++.... .|..++|+++++|++++...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 457999999999997433 32222 23499999999988877766654 78888899999999987541
Q ss_pred ---CCCCccEEEEcCC
Q 012783 401 ---STVKCDKVLLDAP 413 (456)
Q Consensus 401 ---~~~~fD~VllDaP 413 (456)
..+++|+|+..--
T Consensus 489 ~~~~~ekVDIIVSElm 504 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELL 504 (745)
T ss_dssp HHTTCCCCSEEEECCC
T ss_pred ccCCCCcccEEEEecc
Confidence 1478999998765
No 292
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.23 E-value=6.9e-05 Score=72.56 Aligned_cols=82 Identities=21% Similarity=0.138 Sum_probs=50.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEec-ccccccccCCCCccEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVKCDKVL 409 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~-Da~~~~~~~~~~fD~Vl 409 (456)
++++.+|||+|||||+++..++..+ +...|+++|+.......... .+..|. +.+.+... |...+ ...++|+||
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d~~~~pi~-~~~~g~-~ii~~~~~~dv~~l---~~~~~DvVL 161 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQGHEKPIM-RTTLGW-NLIRFKDKTDVFNM---EVIPGDTLL 161 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCGGGS---CCCCCSEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccCccccccc-cccCCC-ceEEeeCCcchhhc---CCCCcCEEE
Confidence 4678899999999999999888764 45678999997642111100 001122 22333322 43333 236899999
Q ss_pred EcCCCCCCcc
Q 012783 410 LDAPCSGLGV 419 (456)
Q Consensus 410 lDaPCSg~G~ 419 (456)
+|.-=+ +|.
T Consensus 162 SDmApn-sG~ 170 (282)
T 3gcz_A 162 CDIGES-SPS 170 (282)
T ss_dssp ECCCCC-CSC
T ss_pred ecCccC-CCC
Confidence 994333 554
No 293
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.22 E-value=0.00033 Score=70.54 Aligned_cols=72 Identities=13% Similarity=0.124 Sum_probs=55.7
Q ss_pred HHhcC-CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCC
Q 012783 326 VAVVD-PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVK 404 (456)
Q Consensus 326 ~~~l~-~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~ 404 (456)
...++ ..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++ .++ |+++.+|+.. + .+ .
T Consensus 201 ~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~------~~~-v~~~~~d~~~-~--~~-~ 267 (372)
T 1fp1_D 201 LEIYTGFEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPP------LSG-IEHVGGDMFA-S--VP-Q 267 (372)
T ss_dssp HHHCCTTTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------CTT-EEEEECCTTT-C--CC-C
T ss_pred HHHhhccCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhh------cCC-CEEEeCCccc-C--CC-C
Confidence 34444 5678899999999999999999986 4578999999 888876653 234 8999999876 2 22 3
Q ss_pred ccEEEE
Q 012783 405 CDKVLL 410 (456)
Q Consensus 405 fD~Vll 410 (456)
||+|++
T Consensus 268 ~D~v~~ 273 (372)
T 1fp1_D 268 GDAMIL 273 (372)
T ss_dssp EEEEEE
T ss_pred CCEEEE
Confidence 899987
No 294
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.14 E-value=0.00078 Score=66.49 Aligned_cols=80 Identities=15% Similarity=0.304 Sum_probs=63.0
Q ss_pred CeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEcCCC
Q 012783 335 QSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPC 414 (456)
Q Consensus 335 ~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllDaPC 414 (456)
.+|+|++||.||.++-+-+. +--.|.|+|+++..++..+.|. +. .++.+|...+....-..+|+|+-=+||
T Consensus 1 mkvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~-----~~--~~~~~DI~~i~~~~~~~~D~l~ggpPC 71 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNH-----SA--KLIKGDISKISSDEFPKCDGIIGGPPS 71 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHC-----CS--EEEESCGGGCCGGGSCCCSEEECCCCG
T ss_pred CeEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHC-----CC--CcccCChhhCCHhhCCcccEEEecCCC
Confidence 37999999999999877553 3446889999999999998873 23 467899988755444579999999999
Q ss_pred CCCcccccC
Q 012783 415 SGLGVLSKT 423 (456)
Q Consensus 415 Sg~G~irr~ 423 (456)
.+.-+.+++
T Consensus 72 Q~fS~ag~~ 80 (331)
T 3ubt_Y 72 QSWSEGGSL 80 (331)
T ss_dssp GGTEETTEE
T ss_pred CCcCCCCCc
Confidence 887776653
No 295
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.13 E-value=0.00025 Score=62.23 Aligned_cols=64 Identities=14% Similarity=0.109 Sum_probs=48.2
Q ss_pred CCCCeEEEEcCCCc-hHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEE-E
Q 012783 332 QPGQSIVDCCAAPG-GKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKV-L 409 (456)
Q Consensus 332 ~~g~~VLDlcAGpG-gkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~V-l 409 (456)
.++++|||+|||+| ..+..|++.. ...|+|+|+++..+. +++.|+++.....-..||+| .
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~----------------~v~dDiF~P~~~~Y~~~DLIYs 95 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG----------------IVRDDITSPRMEIYRGAALIYS 95 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT----------------EECCCSSSCCHHHHTTEEEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc----------------eEEccCCCCcccccCCcCEEEE
Confidence 45789999999999 5888888742 357999999998766 67788876332211479999 7
Q ss_pred EcCC
Q 012783 410 LDAP 413 (456)
Q Consensus 410 lDaP 413 (456)
+.||
T Consensus 96 irPP 99 (153)
T 2k4m_A 96 IRPP 99 (153)
T ss_dssp ESCC
T ss_pred cCCC
Confidence 7776
No 296
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.12 E-value=0.0008 Score=66.01 Aligned_cols=83 Identities=12% Similarity=0.111 Sum_probs=61.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCce-EEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccC---CCCccE
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGL-VYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS---TVKCDK 407 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~-V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~---~~~fD~ 407 (456)
..+-+|+|+|||.||.++-+.+. +-... |+++|+++..++..+.|. ++ ..++.+|+..+.... ...+|+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~-----~~-~~~~~~DI~~i~~~~i~~~~~~Dl 86 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH-----QG-KIMYVGDVRSVTQKHIQEWGPFDL 86 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT-----TT-CEEEECCGGGCCHHHHHHTCCCSE
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC-----CC-CceeCCChHHccHHHhcccCCcCE
Confidence 34668999999999999887664 21112 699999999999888774 22 346788988764321 146999
Q ss_pred EEEcCCCCCCcccc
Q 012783 408 VLLDAPCSGLGVLS 421 (456)
Q Consensus 408 VllDaPCSg~G~ir 421 (456)
|+..+||.+.-..+
T Consensus 87 l~ggpPCQ~fS~ag 100 (295)
T 2qrv_A 87 VIGGSPCNDLSIVN 100 (295)
T ss_dssp EEECCCCGGGBTTC
T ss_pred EEecCCCccccccC
Confidence 99999998776654
No 297
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.12 E-value=0.00081 Score=65.52 Aligned_cols=81 Identities=15% Similarity=0.068 Sum_probs=50.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEec-ccccccccCCCCccEEEE
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~-Da~~~~~~~~~~fD~Vll 410 (456)
.+|.+|||+||||||++..+++.+ +...|+++|+.......... .+..+. +.+.+..+ |...+ ..++||+|++
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~~~~di~~l---~~~~~DlVls 153 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKFKDKSNVFTM---PTEPSDTLLC 153 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCTTTS---CCCCCSEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEecccccccccc-ccccCC-ceEEeecCceeeec---CCCCcCEEee
Confidence 579999999999999999998764 34578899996531100000 000111 22333222 33322 2368999999
Q ss_pred cCCCCCCcc
Q 012783 411 DAPCSGLGV 419 (456)
Q Consensus 411 DaPCSg~G~ 419 (456)
|.-.+ +|.
T Consensus 154 D~APn-sG~ 161 (300)
T 3eld_A 154 DIGES-SSN 161 (300)
T ss_dssp CCCCC-CSS
T ss_pred cCcCC-CCC
Confidence 98777 785
No 298
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.09 E-value=0.0006 Score=67.99 Aligned_cols=67 Identities=21% Similarity=0.211 Sum_probs=53.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ ..+ |+++.+|+.. + .+ .||.|++
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~-v~~~~~d~~~-~--~p-~~D~v~~ 252 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFP-KLKCIVFDR-PQVVENLSG------SNN-LTYVGGDMFT-S--IP-NADAVLL 252 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------BTT-EEEEECCTTT-C--CC-CCSEEEE
T ss_pred cccCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeC-HHHHhhccc------CCC-cEEEeccccC-C--CC-CccEEEe
Confidence 45678999999999999999998864 578999999 888877654 234 8999999865 2 12 3999987
No 299
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.07 E-value=0.00046 Score=69.53 Aligned_cols=72 Identities=10% Similarity=0.093 Sum_probs=54.0
Q ss_pred HHhcC-CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCC
Q 012783 326 VAVVD-PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVK 404 (456)
Q Consensus 326 ~~~l~-~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~ 404 (456)
+..+. ..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++ . +|+++.+|+.. + .. ..
T Consensus 195 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~------~-~v~~~~~d~~~-~-~p-~~ 262 (368)
T 3reo_A 195 LEMYNGFEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPAF------S-GVEHLGGDMFD-G-VP-KG 262 (368)
T ss_dssp HTTCCTTTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC------T-TEEEEECCTTT-C-CC-CC
T ss_pred HHhcccccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhhc------C-CCEEEecCCCC-C-CC-CC
Confidence 33344 5567899999999999999999986 4678999999 8877665431 3 48999999875 2 11 23
Q ss_pred ccEEEE
Q 012783 405 CDKVLL 410 (456)
Q Consensus 405 fD~Vll 410 (456)
|+|++
T Consensus 263 -D~v~~ 267 (368)
T 3reo_A 263 -DAIFI 267 (368)
T ss_dssp -SEEEE
T ss_pred -CEEEE
Confidence 88887
No 300
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.07 E-value=0.00011 Score=71.12 Aligned_cols=83 Identities=18% Similarity=0.161 Sum_probs=49.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
++++.+|||+|||||+++..+++.. +.+.|+++|+.......... ....|. +.+ .+..++... ....++||+|++
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGvDl~~~pi~-~~~~g~-~ii-~~~~~~dv~-~l~~~~~DlVls 146 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGRDGHEKPMN-VQSLGW-NII-TFKDKTDIH-RLEPVKCDTLLC 146 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTCCCCCC-CCBTTG-GGE-EEECSCCTT-TSCCCCCSEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhc-CCCcceeEEEeccCcccccc-cCcCCC-CeE-EEeccceeh-hcCCCCccEEEe
Confidence 5678899999999999999888753 34578888887432100000 001122 333 345544221 122468999999
Q ss_pred cCCCCCCcc
Q 012783 411 DAPCSGLGV 419 (456)
Q Consensus 411 DaPCSg~G~ 419 (456)
|.-=+ +|.
T Consensus 147 D~apn-sG~ 154 (277)
T 3evf_A 147 DIGES-SSS 154 (277)
T ss_dssp CCCCC-CSC
T ss_pred cCccC-cCc
Confidence 95333 554
No 301
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.06 E-value=0.0015 Score=63.91 Aligned_cols=59 Identities=10% Similarity=0.076 Sum_probs=46.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccc
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da 394 (456)
.+|+.|||.|||+|..+..++.+ ..+++++|+++..++.++++++...-...+ .+.+|+
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~~~~~~-~~~~~~ 292 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREVPGFSL-EVLDGA 292 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHSTTCCE-EEECC-
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhccccch-hhCCcc
Confidence 68999999999999988877664 468999999999999999999876333222 344454
No 302
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.04 E-value=0.00067 Score=67.69 Aligned_cols=81 Identities=16% Similarity=0.272 Sum_probs=59.6
Q ss_pred CeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccC--CCCccEEEEc
Q 012783 335 QSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS--TVKCDKVLLD 411 (456)
Q Consensus 335 ~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~--~~~fD~VllD 411 (456)
-+|+|+|||.||.++-+.+. +- .-.|.|+|+++..++..+.|.. + ..++++|+..+.... ...+|+|+..
T Consensus 4 ~~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~~-----~-~~~~~~DI~~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNFP-----E-TNLLNRNIQQLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCT-----T-SCEECCCGGGCCHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhCC-----C-CceeccccccCCHHHhccCCCCEEEec
Confidence 37999999999999888765 21 1358899999999999988853 1 235678887664321 1269999999
Q ss_pred CCCCCCccccc
Q 012783 412 APCSGLGVLSK 422 (456)
Q Consensus 412 aPCSg~G~irr 422 (456)
+||.+.-...+
T Consensus 77 pPCQ~fS~ag~ 87 (333)
T 4h0n_A 77 PPCQPFTRNGK 87 (333)
T ss_dssp CCCCCSEETTE
T ss_pred CCCcchhhhhh
Confidence 99987765543
No 303
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.00 E-value=0.00065 Score=68.33 Aligned_cols=73 Identities=11% Similarity=0.094 Sum_probs=54.9
Q ss_pred HHHhcC-CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCC
Q 012783 325 VVAVVD-PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 403 (456)
Q Consensus 325 v~~~l~-~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~ 403 (456)
++..+. ..++.+|||+|||+|..+..+++.. +..+++++|+ +..++.+++ . .+|+++.+|+.. +.. .
T Consensus 192 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~D~~~-~~p--~ 259 (364)
T 3p9c_A 192 LLELYHGFEGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQ------F-PGVTHVGGDMFK-EVP--S 259 (364)
T ss_dssp HHHHCCTTTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTTT-CCC--C
T ss_pred HHHhcccccCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhh------c-CCeEEEeCCcCC-CCC--C
Confidence 344444 6678999999999999999999986 4578999999 777765543 1 348999999876 221 2
Q ss_pred CccEEEE
Q 012783 404 KCDKVLL 410 (456)
Q Consensus 404 ~fD~Vll 410 (456)
. |+|++
T Consensus 260 ~-D~v~~ 265 (364)
T 3p9c_A 260 G-DTILM 265 (364)
T ss_dssp C-SEEEE
T ss_pred C-CEEEe
Confidence 3 88886
No 304
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.98 E-value=0.00057 Score=68.03 Aligned_cols=76 Identities=16% Similarity=0.292 Sum_probs=57.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHcC-CCceE-EEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccC--CCCccEEE
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLV-YAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS--TVKCDKVL 409 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~-~~g~V-~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~--~~~fD~Vl 409 (456)
.-+|+|+|||.||.++-+... + +.-.| .|+|+++..++..+.|.... ++++|+..+.... ...+|+|+
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~~~-------~~~~DI~~~~~~~i~~~~~Dil~ 81 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFKEE-------VQVKNLDSISIKQIESLNCNTWF 81 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHCCC-------CBCCCTTTCCHHHHHHTCCCEEE
T ss_pred CCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCCCC-------cccCChhhcCHHHhccCCCCEEE
Confidence 358999999999999887663 2 11356 79999999999999986311 4677877654311 12699999
Q ss_pred EcCCCCCC
Q 012783 410 LDAPCSGL 417 (456)
Q Consensus 410 lDaPCSg~ 417 (456)
..+||.+.
T Consensus 82 ggpPCQ~f 89 (327)
T 3qv2_A 82 MSPPCQPY 89 (327)
T ss_dssp ECCCCTTC
T ss_pred ecCCccCc
Confidence 99999988
No 305
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=96.81 E-value=0.00066 Score=67.86 Aligned_cols=68 Identities=19% Similarity=0.174 Sum_probs=53.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++ ..+ |+++.+|+.. + . ..||+|++
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~-v~~~~~d~~~-~--~-~~~D~v~~ 257 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTG------NEN-LNFVGGDMFK-S--I-PSADAVLL 257 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCC------CSS-EEEEECCTTT-C--C-CCCSEEEE
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhccc------CCC-cEEEeCccCC-C--C-CCceEEEE
Confidence 3467899999999999999999986 4578999999 677765543 344 8999999876 2 2 25999998
Q ss_pred c
Q 012783 411 D 411 (456)
Q Consensus 411 D 411 (456)
-
T Consensus 258 ~ 258 (358)
T 1zg3_A 258 K 258 (358)
T ss_dssp E
T ss_pred c
Confidence 3
No 306
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.78 E-value=0.0039 Score=63.83 Aligned_cols=66 Identities=17% Similarity=0.174 Sum_probs=52.4
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHH-HHcCCCceEEEEeCCHHHHHHHHHHHHH--c-CCCceEEEEeccc
Q 012783 329 VDPQPGQSIVDCCAAPGGKTLYMA-SCLSGQGLVYAIDINKGRLRILNETAKL--H-QVNSVIRTIHADL 394 (456)
Q Consensus 329 l~~~~g~~VLDlcAGpGgkt~~la-~~~~~~g~V~AvDis~~rl~~l~~n~~r--~-g~~~~V~~~~~Da 394 (456)
+.+.+++.|+|+||+.|..|+.++ ...++.++|+|+|.++...+.+++|++. + +...+|++++.-+
T Consensus 222 ~~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 222 LRFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred cccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 346789999999999999999988 4444458999999999999999999998 2 3513367665443
No 307
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.75 E-value=0.0032 Score=63.24 Aligned_cols=81 Identities=9% Similarity=0.107 Sum_probs=60.6
Q ss_pred ccccccchH-HHHHHHhcCCCC------CCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 313 GLCAVQDES-AGLVVAVVDPQP------GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 313 G~~~vQd~s-s~lv~~~l~~~~------g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
|+-.+.|.. ...++..+++.+ ++.|||+|.|+|..|..+++... ..+|+|+|+++..+..+++.. ..+
T Consensus 31 GQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~---~~~- 105 (353)
T 1i4w_A 31 GFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF---EGS- 105 (353)
T ss_dssp GCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT---TTS-
T ss_pred CcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc---cCC-
Confidence 443343433 345666677653 58999999999999999998642 358999999999999998876 233
Q ss_pred eEEEEeccccccc
Q 012783 386 VIRTIHADLRTFA 398 (456)
Q Consensus 386 ~V~~~~~Da~~~~ 398 (456)
+++++++|+..+.
T Consensus 106 ~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 106 PLQILKRDPYDWS 118 (353)
T ss_dssp SCEEECSCTTCHH
T ss_pred CEEEEECCccchh
Confidence 4899999997653
No 308
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.67 E-value=0.0022 Score=67.11 Aligned_cols=84 Identities=19% Similarity=0.265 Sum_probs=58.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc-------------
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN------------- 400 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~------------- 400 (456)
.-+|+|+|||.||.++-+... +--.|+|+|+++..++..+.|.... ++ ..++++|+..+...
T Consensus 88 ~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~~--p~-~~~~~~DI~~i~~~~~~~~~~~~~~~~ 162 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYCD--PA-THHFNEDIRDITLSHQEGVSDEAAAEH 162 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCCC--TT-TCEEESCTHHHHCTTCTTSCHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhcccC--CC-cceeccchhhhhhccccccchhhHHhh
Confidence 458999999999999877653 2335899999999999988874211 12 24567888766411
Q ss_pred ---CCCCccEEEEcCCCCCCccccc
Q 012783 401 ---STVKCDKVLLDAPCSGLGVLSK 422 (456)
Q Consensus 401 ---~~~~fD~VllDaPCSg~G~irr 422 (456)
....+|+|+.-+||-+.-+.++
T Consensus 163 i~~~~~~~Dvl~gGpPCQ~FS~AG~ 187 (482)
T 3me5_A 163 IRQHIPEHDVLLAGFPCQPFSLAGV 187 (482)
T ss_dssp HHHHSCCCSEEEEECCCCCC-----
T ss_pred hhhcCCCCCEEEecCCCcchhhhCc
Confidence 1246899999999987766553
No 309
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.65 E-value=0.0015 Score=66.00 Aligned_cols=81 Identities=11% Similarity=0.114 Sum_probs=62.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc-----CC--CceEEEEeccccccccc---C
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-----QV--NSVIRTIHADLRTFADN---S 401 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~-----g~--~~~V~~~~~Da~~~~~~---~ 401 (456)
.+..+||=+|.|-|+....+.+. + ..+|+.||+++..++.+++.+... .. ..+++++.+|+..+... .
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~ 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc
Confidence 35689999999999999988875 3 478999999999999999875321 11 12488999999877532 2
Q ss_pred CCCccEEEEcCCC
Q 012783 402 TVKCDKVLLDAPC 414 (456)
Q Consensus 402 ~~~fD~VllDaPC 414 (456)
..+||+|++|++-
T Consensus 282 ~~~yDvIIvDl~D 294 (381)
T 3c6k_A 282 GREFDYVINDLTA 294 (381)
T ss_dssp TCCEEEEEEECCS
T ss_pred cCceeEEEECCCC
Confidence 3589999999753
No 310
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.60 E-value=0.0037 Score=60.78 Aligned_cols=72 Identities=18% Similarity=0.108 Sum_probs=51.4
Q ss_pred CCCCCCeEEEEcC------CCchHHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCC
Q 012783 330 DPQPGQSIVDCCA------APGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402 (456)
Q Consensus 330 ~~~~g~~VLDlcA------GpGgkt~~la~~~~~~-g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~ 402 (456)
.+..|++|||+|| +||+. .+.+. .+. +.|+++|+.+-- ...+ .++++|...+.. .
T Consensus 106 ~vp~gmrVLDLGA~s~kg~APGS~--VLr~~-~p~g~~VVavDL~~~~-----------sda~--~~IqGD~~~~~~--~ 167 (344)
T 3r24_A 106 AVPYNMRVIHFGAGSDKGVAPGTA--VLRQW-LPTGTLLVDSDLNDFV-----------SDAD--STLIGDCATVHT--A 167 (344)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHHH--HHHHH-SCTTCEEEEEESSCCB-----------CSSS--EEEESCGGGEEE--S
T ss_pred eecCCCEEEeCCCCCCCCCCCcHH--HHHHh-CCCCcEEEEeeCcccc-----------cCCC--eEEEcccccccc--C
Confidence 3556999999997 99993 34444 555 599999997631 1122 358999766543 3
Q ss_pred CCccEEEEcCCCCCCcc
Q 012783 403 VKCDKVLLDAPCSGLGV 419 (456)
Q Consensus 403 ~~fD~VllDaPCSg~G~ 419 (456)
.+||+|+.|.-..-+|.
T Consensus 168 ~k~DLVISDMAPNtTG~ 184 (344)
T 3r24_A 168 NKWDLIISDMYDPRTKH 184 (344)
T ss_dssp SCEEEEEECCCCTTSCS
T ss_pred CCCCEEEecCCCCcCCc
Confidence 68999999977666776
No 311
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.55 E-value=0.0028 Score=60.66 Aligned_cols=49 Identities=14% Similarity=0.240 Sum_probs=40.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 012783 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV 383 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~ 383 (456)
.+|+.|||.+||+|..+..+..+ ..+++++|+++..++.++++++..++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 68999999999999887766554 46899999999999999999987664
No 312
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=96.55 E-value=0.00083 Score=59.64 Aligned_cols=60 Identities=13% Similarity=0.134 Sum_probs=47.4
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc--CCCCcc
Q 012783 329 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--STVKCD 406 (456)
Q Consensus 329 l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~--~~~~fD 406 (456)
+++.+|++|||+|||. +++|+++.+++.++++... + +.++++|+..++.. ..++||
T Consensus 8 ~g~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~----~-~~~~~~d~~~~~~~~~~~~~fD 65 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN----E-GRVSVENIKQLLQSAHKESSFD 65 (176)
T ss_dssp TTCCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT----T-SEEEEEEGGGGGGGCCCSSCEE
T ss_pred cCCCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc----C-cEEEEechhcCccccCCCCCEe
Confidence 4578999999999985 2399999999999887532 2 68899999877641 347899
Q ss_pred EEEE
Q 012783 407 KVLL 410 (456)
Q Consensus 407 ~Vll 410 (456)
.|++
T Consensus 66 ~V~~ 69 (176)
T 2ld4_A 66 IILS 69 (176)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9997
No 313
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=95.28 E-value=0.027 Score=57.51 Aligned_cols=90 Identities=9% Similarity=0.047 Sum_probs=59.9
Q ss_pred CeEEEEcCCCchHHHHHHHHcCCCce----EEEEeCCHHHHHHHHHHHHHcCCC--c---------------e-------
Q 012783 335 QSIVDCCAAPGGKTLYMASCLSGQGL----VYAIDINKGRLRILNETAKLHQVN--S---------------V------- 386 (456)
Q Consensus 335 ~~VLDlcAGpGgkt~~la~~~~~~g~----V~AvDis~~rl~~l~~n~~r~g~~--~---------------~------- 386 (456)
-+|+|+|||.||.+.-+-+.-.+-.. |.|+|+++..++..+.|....... . .
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~~~~~~~~~~~~~l~~~s~d~k~~~~~~~i~ 90 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILSISNDSKMPISEYGIK 90 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCSSCCCCCBCCCTTCCCCBSSSSSCCCHHHHH
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCCCcccchhhhhhhhhhccccccccccccccc
Confidence 48999999999998877654100123 899999999999998886432100 0 0
Q ss_pred ------EE----------EEecccccccccC-CCCccEEEEcCCCCCCcccccCC
Q 012783 387 ------IR----------TIHADLRTFADNS-TVKCDKVLLDAPCSGLGVLSKTC 424 (456)
Q Consensus 387 ------V~----------~~~~Da~~~~~~~-~~~fD~VllDaPCSg~G~irr~p 424 (456)
+. ...+|++.+.... ++.+|+++.=+||.+....+++-
T Consensus 91 ~l~~~~l~~i~~~~~~~~~~~~DI~~i~~~~ip~~vDll~ggpPCQ~fS~ag~~~ 145 (403)
T 4dkj_A 91 KINNTIKASYLNYAKKHFNNLFDIKKVNKDNFPKNIDIFTYSFPCQDLSVQGLQK 145 (403)
T ss_dssp HHTTBHHHHHHHHHHHHSCBCCCGGGCCTTTSCSSCSEEEECCCCTTTCTTSCCC
T ss_pred cccHHHHHHHHhhcccCCCcccchhhcCHhhCCCCCcEEEEeCCCCCHHHhCCCC
Confidence 00 0247776654322 34579999999998877666543
No 314
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=94.94 E-value=0.071 Score=60.27 Aligned_cols=81 Identities=12% Similarity=0.218 Sum_probs=58.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccc-------------c
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA-------------D 399 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~~-g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~-------------~ 399 (456)
.-+++|++||.||.++-+.+. +- -.|.|+|+++..++..+.|. ++ ..++.+|+..+. .
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A--G~~~vv~avEid~~A~~ty~~N~-----p~-~~~~~~DI~~l~~~~~~~di~~~~~~ 611 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA--GISDTLWAIEMWDPAAQAFRLNN-----PG-STVFTEDCNILLKLVMAGETTNSRGQ 611 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH--TSEEEEEEECSSHHHHHHHHHHC-----TT-SEEECSCHHHHHHHHHHTCSBCTTCC
T ss_pred CCeEEEeccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhC-----CC-CccccccHHHHhhhccchhhhhhhhh
Confidence 347999999999999888664 22 35889999999999888873 22 345666654321 0
Q ss_pred c--CCCCccEEEEcCCCCCCccccc
Q 012783 400 N--STVKCDKVLLDAPCSGLGVLSK 422 (456)
Q Consensus 400 ~--~~~~fD~VllDaPCSg~G~irr 422 (456)
. ..+.+|+|+.=+||-+.-..++
T Consensus 612 ~lp~~~~vDll~GGpPCQ~FS~ag~ 636 (1002)
T 3swr_A 612 RLPQKGDVEMLCGGPPCQGFSGMNR 636 (1002)
T ss_dssp BCCCTTTCSEEEECCCCTTCCSSSC
T ss_pred hcccCCCeeEEEEcCCCcchhhhCC
Confidence 0 1246899999999987766554
No 315
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=94.55 E-value=0.093 Score=57.92 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=35.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC----CceEEEEeCCHHHHHHHHHHH
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG----QGLVYAIDINKGRLRILNETA 378 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~----~g~V~AvDis~~rl~~l~~n~ 378 (456)
...+|+|++||.||.++-+.+.... --.+.|+|+++..++..+.|.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 3467999999999999877654100 126899999999999998883
No 316
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=93.28 E-value=0.23 Score=57.74 Aligned_cols=81 Identities=12% Similarity=0.222 Sum_probs=57.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccc-------------c
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA-------------D 399 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~~-g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~-------------~ 399 (456)
.-+|+|++||.||.++-+... +- -.|.|+|+++..++..+.|. ++ ..++.+|...+. .
T Consensus 851 ~l~viDLFsG~GGlslGfe~A--G~~~vv~avEid~~A~~ty~~N~-----p~-~~~~~~DI~~l~~~~~~gdi~~~~~~ 922 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQA--GISETLWAIEMWDPAAQAFRLNN-----PG-TTVFTEDCNVLLKLVMAGEVTNSLGQ 922 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHT--TSEEEEEEECCSHHHHHHHHHHC-----TT-SEEECSCHHHHHHHHTTTCSBCSSCC
T ss_pred CceEEecccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhC-----CC-CcEeeccHHHHhHhhhccchhhhhhh
Confidence 457999999999999887653 21 25889999999999988873 22 235566654321 0
Q ss_pred c--CCCCccEEEEcCCCCCCccccc
Q 012783 400 N--STVKCDKVLLDAPCSGLGVLSK 422 (456)
Q Consensus 400 ~--~~~~fD~VllDaPCSg~G~irr 422 (456)
. ..+.+|+|+-=+||-+.-..++
T Consensus 923 ~lp~~~~vDvl~GGpPCQ~FS~agr 947 (1330)
T 3av4_A 923 RLPQKGDVEMLCGGPPCQGFSGMNR 947 (1330)
T ss_dssp BCCCTTTCSEEEECCCCTTTCSSSC
T ss_pred hccccCccceEEecCCCcccccccc
Confidence 0 1246899999999987766554
No 317
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.06 E-value=0.17 Score=49.75 Aligned_cols=80 Identities=21% Similarity=0.265 Sum_probs=52.9
Q ss_pred HHhcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccc-ccccCCC
Q 012783 326 VAVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FADNSTV 403 (456)
Q Consensus 326 ~~~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~-~~~~~~~ 403 (456)
.....+++|++||-.|||+ |..++++|..++ .+|+++|.++++++.++ ++|.+..+.....|... +.. ..+
T Consensus 159 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~~i~~~~~~~~~~~~~-~~g 231 (340)
T 3s2e_A 159 LKVTDTRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLNLAR----RLGAEVAVNARDTDPAAWLQK-EIG 231 (340)
T ss_dssp HHTTTCCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HTTCSEEEETTTSCHHHHHHH-HHS
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHH----HcCCCEEEeCCCcCHHHHHHH-hCC
Confidence 3445788999999999886 778888888763 49999999999988764 47876422111112111 111 113
Q ss_pred CccEEEEcC
Q 012783 404 KCDKVLLDA 412 (456)
Q Consensus 404 ~fD~VllDa 412 (456)
.+|.|+..+
T Consensus 232 ~~d~vid~~ 240 (340)
T 3s2e_A 232 GAHGVLVTA 240 (340)
T ss_dssp SEEEEEESS
T ss_pred CCCEEEEeC
Confidence 688887643
No 318
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.60 E-value=0.091 Score=51.76 Aligned_cols=64 Identities=9% Similarity=0.055 Sum_probs=50.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~ 399 (456)
..+|+.|||-+||+|+.+. .|..+ ..+.+++|+++..++.+++++++.+.. ...++.|+..+..
T Consensus 250 ~~~~~~VlDpF~GsGtt~~-aa~~~--gr~~ig~e~~~~~~~~~~~r~~~~~~~--~~~~~~~~~~i~~ 313 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGL-VAERE--SRKWISFEMKPEYVAASAFRFLDNNIS--EEKITDIYNRILN 313 (323)
T ss_dssp CCTTCEEEETTCTTCHHHH-HHHHT--TCEEEEEESCHHHHHHHHGGGSCSCSC--HHHHHHHHHHHHT
T ss_pred CCCCCEEEECCCCCCHHHH-HHHHc--CCCEEEEeCCHHHHHHHHHHHHhcccc--hHHHHHHHHHHHc
Confidence 4689999999999998654 44444 368999999999999999999887765 3556777766543
No 319
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=92.59 E-value=0.12 Score=50.83 Aligned_cols=49 Identities=12% Similarity=0.050 Sum_probs=38.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCH---HHHHHHHHHHHHcC
Q 012783 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINK---GRLRILNETAKLHQ 382 (456)
Q Consensus 331 ~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~---~rl~~l~~n~~r~g 382 (456)
..+|+.|||-+||+|+.+.....+ .-+.+++|+++ ..++.+++++++.|
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~---~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQE---GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHH---TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCEEEecCCCCCHHHHHHHHc---CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 368999999999999876655544 36899999999 99999999988766
No 320
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=91.66 E-value=0.28 Score=48.48 Aligned_cols=54 Identities=22% Similarity=0.269 Sum_probs=41.7
Q ss_pred HhcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
....+++|++||-.|||+ |..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 219 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSATRLSKAK----EIGADL 219 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HhCCCE
Confidence 445788999999999875 666777887753 348999999999988764 478764
No 321
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.56 E-value=0.079 Score=57.56 Aligned_cols=89 Identities=10% Similarity=-0.010 Sum_probs=57.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-----------CCceEEEEeCCHHHHHHHHHH--------------HHHc-----C
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-----------GQGLVYAIDINKGRLRILNET--------------AKLH-----Q 382 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-----------~~g~V~AvDis~~rl~~l~~n--------------~~r~-----g 382 (456)
+.-+|+|+|-|+|...+.+.+... ..-+++++|..+-..+.+++. ++.+ |
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 446899999999999887766431 125799999955444333331 2211 1
Q ss_pred -----CC---ceEEEEecccccccccC----CCCccEEEEcCCCCCCcccccCCCc
Q 012783 383 -----VN---SVIRTIHADLRTFADNS----TVKCDKVLLDAPCSGLGVLSKTCVG 426 (456)
Q Consensus 383 -----~~---~~V~~~~~Da~~~~~~~----~~~fD~VllDaPCSg~G~irr~p~~ 426 (456)
+. -.++++.+|+.+..... ...||.+++|+-.- .||||.
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p-----~~np~~ 188 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAP-----AKNPDM 188 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC-------CCTT
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCC-----CCChhh
Confidence 11 14678889997654433 36899999998443 489995
No 322
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=91.34 E-value=0.38 Score=47.96 Aligned_cols=54 Identities=13% Similarity=0.079 Sum_probs=42.0
Q ss_pred HhcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
....+++|++||=.|||+ |..++++|..++ ..+|+++|.++++++.+++ +|.+.
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~ 230 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRRLAEE----VGATA 230 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHH----HTCSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----cCCCE
Confidence 556789999999999865 666777877753 3489999999999887654 68764
No 323
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=91.30 E-value=0.33 Score=48.24 Aligned_cols=54 Identities=22% Similarity=0.306 Sum_probs=41.7
Q ss_pred HhcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
...++++|++||-.|||+ |..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 238 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAK----QLGATH 238 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----HHTCSE
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCCE
Confidence 345788999999999876 667778888763 347999999999988775 357653
No 324
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=91.24 E-value=0.56 Score=45.91 Aligned_cols=88 Identities=14% Similarity=-0.010 Sum_probs=49.9
Q ss_pred CCeEEEEcCCCchHHHHHH---HHcCCCce--EEEEeCCH--------HHHHH-HHHHHHHc----CCCceEEEEecccc
Q 012783 334 GQSIVDCCAAPGGKTLYMA---SCLSGQGL--VYAIDINK--------GRLRI-LNETAKLH----QVNSVIRTIHADLR 395 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la---~~~~~~g~--V~AvDis~--------~rl~~-l~~n~~r~----g~~~~V~~~~~Da~ 395 (456)
.-+|||+|-|+|..++... ...++..+ .+++|..+ .-... .+.-+... +-.-...+..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 3579999999998754332 23344554 46666521 11111 11222221 11112567889997
Q ss_pred cccccC-CCCccEEEEcCCCCCCcccccCCCc
Q 012783 396 TFADNS-TVKCDKVLLDAPCSGLGVLSKTCVG 426 (456)
Q Consensus 396 ~~~~~~-~~~fD~VllDaPCSg~G~irr~p~~ 426 (456)
...... ...||+|++|+ . .-+++||.
T Consensus 177 ~~l~~l~~~~~Da~flDg----F-sP~kNPeL 203 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDA----F-SPYKNPEL 203 (308)
T ss_dssp HHGGGCCSCCEEEEEECC----S-CTTTSGGG
T ss_pred HHHhhhcccceeEEEeCC----C-CcccCccc
Confidence 654433 34799999996 1 12689995
No 325
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=91.17 E-value=0.5 Score=46.43 Aligned_cols=70 Identities=11% Similarity=0.043 Sum_probs=49.6
Q ss_pred HhcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCc
Q 012783 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 405 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~f 405 (456)
....+++|++||-.|||+ |..++++|..++ .+|+++|.++++++.++ .+|.+.. + .|...+ ...|
T Consensus 170 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~v---~-~~~~~~----~~~~ 235 (348)
T 3two_A 170 KFSKVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDAL----SMGVKHF---Y-TDPKQC----KEEL 235 (348)
T ss_dssp HHTTCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHHH----HTTCSEE---E-SSGGGC----CSCE
T ss_pred HhcCCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHH----hcCCCee---c-CCHHHH----hcCC
Confidence 345788999999999875 666778887753 48999999999988764 4787642 2 333222 1278
Q ss_pred cEEEE
Q 012783 406 DKVLL 410 (456)
Q Consensus 406 D~Vll 410 (456)
|.|+-
T Consensus 236 D~vid 240 (348)
T 3two_A 236 DFIIS 240 (348)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 88864
No 326
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.53 E-value=0.67 Score=46.14 Aligned_cols=51 Identities=12% Similarity=0.160 Sum_probs=40.1
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 329 VDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 329 l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
+.+++|++||-.|||+ |..++++|..++ .+|+++|.++++++.+++ +|.+.
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~Vi~~~~~~~~~~~a~~----lGa~~ 241 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAMG--AHVVAFTTSEAKREAAKA----LGADE 241 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHH----HTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cCCcE
Confidence 4788999999999875 666777887753 479999999999887754 67653
No 327
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=90.00 E-value=0.34 Score=47.81 Aligned_cols=55 Identities=18% Similarity=0.212 Sum_probs=41.6
Q ss_pred HHhcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 326 VAVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 326 ~~~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
.....+++|++||=.|||+ |..++++|..++ ..+|+++|.++++++.+++ +|.+.
T Consensus 159 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa~~ 214 (352)
T 3fpc_A 159 AELANIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCCDIALE----YGATD 214 (352)
T ss_dssp HHHTTCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHHHHHHH----HTCCE
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHHHHHHH----hCCce
Confidence 3556789999999998865 556777777642 3489999999999887654 67754
No 328
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=89.68 E-value=0.55 Score=47.14 Aligned_cols=52 Identities=25% Similarity=0.243 Sum_probs=41.8
Q ss_pred HhcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 012783 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV 383 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~ 383 (456)
...++++|++||-.|||+ |..++++|..++ ..+|+++|.++++++.++ .+|.
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa 231 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLLS----DAGF 231 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----TTTC
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCC
Confidence 456788999999999877 777888888763 348999999999988764 4676
No 329
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=88.09 E-value=0.64 Score=45.96 Aligned_cols=51 Identities=10% Similarity=0.096 Sum_probs=39.5
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 329 VDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 329 l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
+++++|++||-.|+|+ |..++++|..++ .+|+++|.++++++.+++ +|.+.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~~~~~~~~----lGa~~ 226 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSRKREDAMK----MGADH 226 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH----cCCCE
Confidence 5788999999999854 555677777653 479999999999887654 67653
No 330
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=88.08 E-value=1.3 Score=43.20 Aligned_cols=81 Identities=19% Similarity=0.163 Sum_probs=50.3
Q ss_pred HhcCCCCCCeEEEEcCCCch-HHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccc-cccc-CCC
Q 012783 327 AVVDPQPGQSIVDCCAAPGG-KTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FADN-STV 403 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcAGpGg-kt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~-~~~~-~~~ 403 (456)
....+++|++||=.|||+++ .+++++..+. ..+|+++|.++++++.++ .+|.+..+.....|..+ .... ...
T Consensus 157 ~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~----~~Ga~~~i~~~~~~~~~~v~~~t~g~ 231 (348)
T 4eez_A 157 KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAK----KIGADVTINSGDVNPVDEIKKITGGL 231 (348)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHH----HTTCSEEEEC-CCCHHHHHHHHTTSS
T ss_pred cccCCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhh----hcCCeEEEeCCCCCHHHHhhhhcCCC
Confidence 34568899999999998755 4555665543 579999999999987654 57776433322233211 1111 123
Q ss_pred CccEEEEcC
Q 012783 404 KCDKVLLDA 412 (456)
Q Consensus 404 ~fD~VllDa 412 (456)
.+|.++.++
T Consensus 232 g~d~~~~~~ 240 (348)
T 4eez_A 232 GVQSAIVCA 240 (348)
T ss_dssp CEEEEEECC
T ss_pred CceEEEEec
Confidence 567777643
No 331
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=87.64 E-value=1.1 Score=44.69 Aligned_cols=53 Identities=23% Similarity=0.261 Sum_probs=41.2
Q ss_pred HhcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012783 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~ 384 (456)
....+++|++||-.|||+ |..++++|..++ ...|+++|.++++++.++ .+|.+
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~----~lGa~ 232 (398)
T 1kol_A 179 VTAGVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAHAK----AQGFE 232 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCE
T ss_pred HHcCCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHH----HcCCc
Confidence 345788999999999866 667778888763 347999999999998775 46763
No 332
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=85.24 E-value=1.1 Score=43.90 Aligned_cols=51 Identities=20% Similarity=0.253 Sum_probs=39.6
Q ss_pred hcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012783 328 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (456)
Q Consensus 328 ~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~ 384 (456)
...+++|++||-.|+|+ |..++++|..++ .+|+++|.++++++.++ .+|.+
T Consensus 159 ~~~~~~g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~lGa~ 210 (339)
T 1rjw_A 159 VTGAKPGEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGDEKLELAK----ELGAD 210 (339)
T ss_dssp HHTCCTTCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHH----HTTCS
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH----HCCCC
Confidence 34788999999999864 556677777653 59999999999998764 46765
No 333
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=85.20 E-value=1.6 Score=42.46 Aligned_cols=56 Identities=18% Similarity=0.161 Sum_probs=41.8
Q ss_pred HHHhcCCCCCCeEEEEcCCCch-HHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 325 VVAVVDPQPGQSIVDCCAAPGG-KTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 325 v~~~l~~~~g~~VLDlcAGpGg-kt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
......+++|++||=.|||+.| .++++|..++ ...|+++|.++++++.++ ++|.+.
T Consensus 152 ~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a~----~lGa~~ 208 (346)
T 4a2c_A 152 AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALAK----SFGAMQ 208 (346)
T ss_dssp HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred HHHHhccCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHHH----HcCCeE
Confidence 3445678899999999987655 4566776653 457899999999988764 578764
No 334
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=84.45 E-value=1 Score=43.40 Aligned_cols=68 Identities=7% Similarity=-0.026 Sum_probs=47.0
Q ss_pred HhcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCc
Q 012783 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 405 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~f 405 (456)
....+++|++||=.|||+ |..++++|..++ .+|++++ ++++++.+++ +|.+. ++. |...+ ...|
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~~~~~~~~~----lGa~~---v~~-d~~~v----~~g~ 200 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-ASLSQALAAK----RGVRH---LYR-EPSQV----TQKY 200 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SSCCHHHHHH----HTEEE---EES-SGGGC----CSCE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-ChhhHHHHHH----cCCCE---EEc-CHHHh----CCCc
Confidence 445678999999999964 666778888763 4999999 9998887754 67643 222 42222 3567
Q ss_pred cEEE
Q 012783 406 DKVL 409 (456)
Q Consensus 406 D~Vl 409 (456)
|.|+
T Consensus 201 Dvv~ 204 (315)
T 3goh_A 201 FAIF 204 (315)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 7765
No 335
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=83.87 E-value=2.7 Score=39.98 Aligned_cols=81 Identities=12% Similarity=0.055 Sum_probs=54.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHc------CCCceEEEEe-----CCH----------------------HHHHH---HHHH
Q 012783 334 GQSIVDCCAAPGGKTLYMASCL------SGQGLVYAID-----INK----------------------GRLRI---LNET 377 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~------~~~g~V~AvD-----is~----------------------~rl~~---l~~n 377 (456)
...|+++|+..|+.+..++... +...+|+++| ... +.++. ..++
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 4599999999999998877642 2457999999 321 11221 2223
Q ss_pred HHHcCC-CceEEEEecccccccc-----cCCCCccEEEEcCCC
Q 012783 378 AKLHQV-NSVIRTIHADLRTFAD-----NSTVKCDKVLLDAPC 414 (456)
Q Consensus 378 ~~r~g~-~~~V~~~~~Da~~~~~-----~~~~~fD~VllDaPC 414 (456)
.+++|. .++|+++.|++.+... ....+||.|++|+-.
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~ 192 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL 192 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc
Confidence 345676 3669999999876432 123479999999953
No 336
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=82.98 E-value=2.5 Score=41.41 Aligned_cols=53 Identities=17% Similarity=0.186 Sum_probs=40.6
Q ss_pred HhcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
...++++|++||-.|||+ |..++++|..++ .+|+++|.++++++.++ .+|.+.
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~ 215 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLEVAK----NCGADV 215 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HTTCSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHHHHH----HhCCCE
Confidence 445788999999999765 556677777653 46999999999988765 478763
No 337
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=82.85 E-value=0.95 Score=44.25 Aligned_cols=53 Identities=11% Similarity=0.016 Sum_probs=41.7
Q ss_pred HhcCCCCCCeEEEEcCC--CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 327 AVVDPQPGQSIVDCCAA--PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcAG--pGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
....+++|++||-.||| .|..+++++..++ .+|+++|.++++++.+++ +|.+.
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----lga~~ 192 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQILN--FRLIAVTRNNKHTEELLR----LGAAY 192 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTCSE
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----CCCcE
Confidence 45678899999999886 5667778887753 589999999999887764 57653
No 338
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=82.22 E-value=1.4 Score=44.37 Aligned_cols=51 Identities=16% Similarity=0.189 Sum_probs=38.9
Q ss_pred CCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 330 DPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 330 ~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
.+++|++||=.|||+ |..++++|..+ +..+|+++|.++++++.++ .+|.+.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~ 261 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHA-GASKVILSEPSEVRRNLAK----ELGADH 261 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHH----HHTCSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHH----HcCCCE
Confidence 578999999998764 55566777765 3348999999999998775 467753
No 339
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=81.90 E-value=1.6 Score=43.19 Aligned_cols=48 Identities=13% Similarity=0.016 Sum_probs=36.2
Q ss_pred CCCeEEEEc-CC-CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 333 PGQSIVDCC-AA-PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 333 ~g~~VLDlc-AG-pGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
+|++||=.| +| .|..++++|..+. ..+|+++|.++++++.++ .+|.+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~----~lGad~ 220 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVK----SLGAHH 220 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHH----HTTCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHH----HcCCCE
Confidence 789999887 33 3666777777643 469999999999988775 478763
No 340
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=81.82 E-value=2.7 Score=40.98 Aligned_cols=51 Identities=20% Similarity=0.247 Sum_probs=41.1
Q ss_pred CCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 330 DPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 330 ~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
.+++|++||-.|||+ |..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~----~lGa~~ 219 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALAR----EVGADA 219 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHH----HTTCSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCCCE
Confidence 678999999999876 666778887763 469999999999998765 478764
No 341
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=81.74 E-value=2.7 Score=41.31 Aligned_cols=50 Identities=26% Similarity=0.399 Sum_probs=39.2
Q ss_pred HhcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHH
Q 012783 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNET 377 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n 377 (456)
....+++|++||=.|||+ |..++++|..++ ...|+++|.++++++.+++.
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAG-ACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEEESCHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHh
Confidence 446788999999998865 666777887753 33599999999999988763
No 342
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=81.10 E-value=3 Score=40.68 Aligned_cols=51 Identities=10% Similarity=-0.042 Sum_probs=39.0
Q ss_pred CCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 330 DPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 330 ~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
++ +|++||-.|+|+ |..++++|..+.+..+|+++|.++++++.+++ +|.+.
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~ 219 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGADY 219 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCSE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCCE
Confidence 77 999999999865 55677788776212579999999999887654 67653
No 343
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=80.58 E-value=6.3 Score=39.60 Aligned_cols=89 Identities=18% Similarity=0.049 Sum_probs=53.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHc----------------CCCceEEEEeCC-----------HHHHHHHHHHHHHcCCCce
Q 012783 334 GQSIVDCCAAPGGKTLYMASCL----------------SGQGLVYAIDIN-----------KGRLRILNETAKLHQVNSV 386 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~----------------~~~g~V~AvDis-----------~~rl~~l~~n~~r~g~~~~ 386 (456)
..+|+|+||++|..|+.+.+.+ .+.-+|+.+|+- +...+.++ +..|-...
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~---~~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLE---KENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHH---HHTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhh---hhccCCCC
Confidence 4789999999999999887761 235689999986 22222221 22332111
Q ss_pred EEEEecccccccc--cCCCCccEEEEcCCCCCCcccccCCCccc
Q 012783 387 IRTIHADLRTFAD--NSTVKCDKVLLDAPCSGLGVLSKTCVGIG 428 (456)
Q Consensus 387 V~~~~~Da~~~~~--~~~~~fD~VllDaPCSg~G~irr~p~~~~ 428 (456)
-.++.+....+-. ...++||.|+. ++.+--+.+.|+.+.
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~S---s~aLHWls~~p~~l~ 170 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHS---CYCLHWLSQVPSGLV 170 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEE---ESCTTBCSSSCCC--
T ss_pred ceEEEecchhhhhccCCCCceEEEEe---cceeeecCCCchhhh
Confidence 2456665443311 12468999987 556666777776544
No 344
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=79.57 E-value=2.7 Score=41.47 Aligned_cols=54 Identities=7% Similarity=0.044 Sum_probs=40.8
Q ss_pred HhcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
....+++|++||-.|||+ |..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 239 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKAI----ELGATE 239 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCcE
Confidence 345788999999999765 556677777753 348999999999988764 478764
No 345
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=79.54 E-value=2.9 Score=41.29 Aligned_cols=53 Identities=11% Similarity=0.184 Sum_probs=40.2
Q ss_pred hcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 328 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 328 ~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
..++++|++||-.|||+ |..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 187 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~ 240 (374)
T 1cdo_A 187 TAKVEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPDKFEKAK----VFGATD 240 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTCCE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HhCCce
Confidence 45788999999999765 556677777653 338999999999988764 478753
No 346
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=79.05 E-value=3 Score=41.17 Aligned_cols=53 Identities=15% Similarity=0.129 Sum_probs=40.1
Q ss_pred hcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 328 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 328 ~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
..++++|++||-.|||+ |..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 243 (376)
T 1e3i_A 190 TAKVTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKFPKAK----ALGATD 243 (376)
T ss_dssp TSCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HhCCcE
Confidence 45788999999999765 555677777753 348999999999988764 478753
No 347
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=79.02 E-value=3.1 Score=41.10 Aligned_cols=53 Identities=13% Similarity=0.125 Sum_probs=40.1
Q ss_pred hcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 328 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 328 ~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
..++++|++||-.|||+ |..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~ 239 (374)
T 2jhf_A 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKDKFAKAK----EVGATE 239 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HhCCce
Confidence 45788999999999765 556677777653 348999999999988764 477753
No 348
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=78.89 E-value=5.9 Score=37.27 Aligned_cols=76 Identities=16% Similarity=0.073 Sum_probs=53.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CCC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 403 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~~ 403 (456)
|.+||=.| |+||.+.+++..+- ...+|++++.++..++.+.+.+...+.. .+.++.+|..+.... ..+
T Consensus 28 ~k~vlITG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 28 GKKVIVTG-ASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA-SAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCS-EEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 56777555 56788888777553 2458999999999998888777766643 377888998653210 014
Q ss_pred CccEEEEc
Q 012783 404 KCDKVLLD 411 (456)
Q Consensus 404 ~fD~VllD 411 (456)
.+|.|+..
T Consensus 106 ~iD~li~n 113 (286)
T 1xu9_A 106 GLDMLILN 113 (286)
T ss_dssp SCSEEEEC
T ss_pred CCCEEEEC
Confidence 78999987
No 349
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=78.70 E-value=1.7 Score=41.80 Aligned_cols=40 Identities=20% Similarity=0.106 Sum_probs=25.1
Q ss_pred eEEEEeccccccccc-CCCCccEEEEcCCCCCCcccccCCC
Q 012783 386 VIRTIHADLRTFADN-STVKCDKVLLDAPCSGLGVLSKTCV 425 (456)
Q Consensus 386 ~V~~~~~Da~~~~~~-~~~~fD~VllDaPCSg~G~irr~p~ 425 (456)
.++++++|+.++... ..++||+|++|||.-........++
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~ 61 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPG 61 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChh
Confidence 368999999875432 2468999999999965444433443
No 350
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=78.62 E-value=2.4 Score=42.06 Aligned_cols=54 Identities=17% Similarity=0.176 Sum_probs=41.6
Q ss_pred HhcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
....+++|++||=.|||+ |..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 187 ~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 241 (378)
T 3uko_A 187 NTAKVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETAK----KFGVNE 241 (378)
T ss_dssp TTTCCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHHH----TTTCCE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCcE
Confidence 445788999999999864 666777777763 348999999999988664 578764
No 351
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=78.57 E-value=5 Score=31.70 Aligned_cols=70 Identities=24% Similarity=0.152 Sum_probs=45.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCC--ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccc---ccCCCCccE
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQ--GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA---DNSTVKCDK 407 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~--g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~---~~~~~~fD~ 407 (456)
.+.+|+=+|+ |+.+..++..+... ..|+++|.++++++.+. ..+ +.++..|..... ... ..+|.
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~~----~~~~~~d~~~~~~~~~~~-~~~d~ 72 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RMG----VATKQVDAKDEAGLAKAL-GGFDA 72 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TTT----CEEEECCTTCHHHHHHHT-TTCSE
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hCC----CcEEEecCCCHHHHHHHH-cCCCE
Confidence 3567888887 77766666654333 47999999999887665 223 345666665421 122 46899
Q ss_pred EEEcCC
Q 012783 408 VLLDAP 413 (456)
Q Consensus 408 VllDaP 413 (456)
|+.-+|
T Consensus 73 vi~~~~ 78 (118)
T 3ic5_A 73 VISAAP 78 (118)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 998665
No 352
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=78.50 E-value=3.1 Score=41.04 Aligned_cols=54 Identities=13% Similarity=0.143 Sum_probs=40.5
Q ss_pred HhcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
...++++|++||-.|||+ |..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~ 238 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFARAK----EFGATE 238 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHH----HHTCSE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCce
Confidence 345788999999999765 555677777653 348999999999988765 467753
No 353
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=78.28 E-value=7.6 Score=41.63 Aligned_cols=88 Identities=10% Similarity=0.073 Sum_probs=55.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHcC-----------CCceEEEEeC---CHHHHHHHH-----------HHHHHcC-----C
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLS-----------GQGLVYAIDI---NKGRLRILN-----------ETAKLHQ-----V 383 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~-----------~~g~V~AvDi---s~~rl~~l~-----------~n~~r~g-----~ 383 (456)
.-+|||+|-|+|...+...+... ..-+++++|. +.+-+..+- +.++.+. +
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 35899999999998776655431 1236899999 666555222 1122221 1
Q ss_pred --------CceEEEEecccccccccC----CCCccEEEEcCCCCCCcccccCCCc
Q 012783 384 --------NSVIRTIHADLRTFADNS----TVKCDKVLLDAPCSGLGVLSKTCVG 426 (456)
Q Consensus 384 --------~~~V~~~~~Da~~~~~~~----~~~fD~VllDaPCSg~G~irr~p~~ 426 (456)
.-.+++..+|+....... ...||.|++|+-.- +++||.
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p-----~~np~~ 196 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAP-----AKNPDM 196 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCG-----GGCGGG
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCC-----cCChhh
Confidence 023557778887643322 36799999998432 589995
No 354
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=77.65 E-value=6.2 Score=37.67 Aligned_cols=84 Identities=17% Similarity=0.131 Sum_probs=59.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
.|.+||=.|++ ||.+..++..+-. ..+|+.++.+...++.+.+.++..+.. +.++..|..+.... ..
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFD--AHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC--EEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc--eEEEEccCCCHHHHHHHHHHHHHhC
Confidence 56778877665 6777777776533 458999999999999988888777653 78888998764211 01
Q ss_pred CCccEEEEcCCCCCCcc
Q 012783 403 VKCDKVLLDAPCSGLGV 419 (456)
Q Consensus 403 ~~fD~VllDaPCSg~G~ 419 (456)
+.+|.++..+--...|.
T Consensus 107 g~id~lvnnAg~~~~~~ 123 (301)
T 3tjr_A 107 GGVDVVFSNAGIVVAGP 123 (301)
T ss_dssp SSCSEEEECCCCCCCBC
T ss_pred CCCCEEEECCCcCCCCC
Confidence 47899999775444333
No 355
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=77.58 E-value=12 Score=35.15 Aligned_cols=80 Identities=13% Similarity=0.027 Sum_probs=55.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CCC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 403 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~~-g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~~ 403 (456)
+.+||=.|+ +|+.+..++..+-.. .+|++++.+++.++.+.+.++..+. .+.++.+|..+.... ..+
T Consensus 44 ~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 44 NKVALVTGA-GRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY--ESSGYAGDVSKKEEISEVINKILTEHK 120 (285)
T ss_dssp SCEEEEEST-TSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC--CEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC--ceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 566776654 588888888876544 4788899999888877777765554 377888897653210 124
Q ss_pred CccEEEEcCCCCC
Q 012783 404 KCDKVLLDAPCSG 416 (456)
Q Consensus 404 ~fD~VllDaPCSg 416 (456)
.+|.|+..+--..
T Consensus 121 ~id~li~~Ag~~~ 133 (285)
T 2c07_A 121 NVDILVNNAGITR 133 (285)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899999765443
No 356
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=77.48 E-value=3.3 Score=40.47 Aligned_cols=47 Identities=11% Similarity=0.080 Sum_probs=34.6
Q ss_pred CCCeEEEEc-CC-CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 333 PGQSIVDCC-AA-PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 333 ~g~~VLDlc-AG-pGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
+|++||=.| +| .|..++++|..++ .+|+++|.++++++.+++ +|.+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~----lGa~~ 198 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG--LRVITTASRNETIEWTKK----MGADI 198 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEECCSHHHHHHHHH----HTCSE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCcE
Confidence 899999883 33 3555667777653 599999999999887765 67653
No 357
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=76.89 E-value=4 Score=40.18 Aligned_cols=52 Identities=12% Similarity=-0.006 Sum_probs=40.5
Q ss_pred hcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 328 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 328 ~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
...+++|++||-.|+|+ |..++++|..++ .+|+++|.++++++.++ .+|.+.
T Consensus 184 ~~~~~~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~ 236 (363)
T 3uog_A 184 KGHLRAGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDRAF----ALGADH 236 (363)
T ss_dssp TTCCCTTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HHTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHHHH----HcCCCE
Confidence 45688999999999776 556777777753 58999999999988764 468764
No 358
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=76.68 E-value=8.6 Score=35.75 Aligned_cols=86 Identities=9% Similarity=-0.011 Sum_probs=60.6
Q ss_pred CCCeEEEEcCCCc-hHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc---------cC
Q 012783 333 PGQSIVDCCAAPG-GKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------NS 401 (456)
Q Consensus 333 ~g~~VLDlcAGpG-gkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---------~~ 401 (456)
.|..+|=-||+.+ |++..+|+.+- ...+|+.+|.+++.++.+.+.++..+-.. +.++..|...... ..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPE-AHLYQIDVQSDEEVINGFEQIGKD 83 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSS-CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCc-EEEEEccCCCHHHHHHHHHHHHHH
Confidence 4788888887653 56666665443 24689999999999999988888876544 6788889765321 11
Q ss_pred CCCccEEEEcCCCCCCcc
Q 012783 402 TVKCDKVLLDAPCSGLGV 419 (456)
Q Consensus 402 ~~~fD~VllDaPCSg~G~ 419 (456)
.+..|.++.++-..+...
T Consensus 84 ~G~iD~lvnnAg~~~~~~ 101 (256)
T 4fs3_A 84 VGNIDGVYHSIAFANMED 101 (256)
T ss_dssp HCCCSEEEECCCCCCGGG
T ss_pred hCCCCEEEeccccccccc
Confidence 257899999876654443
No 359
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=76.32 E-value=15 Score=33.36 Aligned_cols=82 Identities=11% Similarity=0.107 Sum_probs=57.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc---------cCCC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------NSTV 403 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---------~~~~ 403 (456)
+.+||=.| |+|+.+.+++..+-. ..+|+.++.++..++.+.+.++..+.. +.++..|...... ...+
T Consensus 5 ~k~vlITG-as~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 5 EKVALVTG-ASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFK--ARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCC--EEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc--eEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 55666555 567777777776543 458999999999999988888877653 7888899865321 1124
Q ss_pred CccEEEEcCCCCCCc
Q 012783 404 KCDKVLLDAPCSGLG 418 (456)
Q Consensus 404 ~fD~VllDaPCSg~G 418 (456)
.+|.++..+--+..+
T Consensus 82 ~id~li~~Ag~~~~~ 96 (247)
T 3lyl_A 82 AIDILVNNAGITRDN 96 (247)
T ss_dssp CCSEEEECCCCCCCC
T ss_pred CCCEEEECCCCCCCC
Confidence 789999977544333
No 360
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=76.30 E-value=5.8 Score=38.87 Aligned_cols=74 Identities=14% Similarity=0.054 Sum_probs=46.1
Q ss_pred cCCC-CCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCcc
Q 012783 329 VDPQ-PGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCD 406 (456)
Q Consensus 329 l~~~-~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD 406 (456)
..++ +|++||=.|+|+ |..++++|..++ .+|+++|.++++++.+++ ++|.+..+ -..|...+.. ....||
T Consensus 175 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~~~~~~~~~~~~---~lGa~~vi--~~~~~~~~~~-~~~g~D 246 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVGHMGVKIAKAMG--HHVTVISSSNKKREEALQ---DLGADDYV--IGSDQAKMSE-LADSLD 246 (357)
T ss_dssp TSTTSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSTTHHHHHHT---TSCCSCEE--ETTCHHHHHH-STTTEE
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHH---HcCCceee--ccccHHHHHH-hcCCCC
Confidence 4677 999999998653 444566776653 589999999988876542 47776422 1122111111 123688
Q ss_pred EEEE
Q 012783 407 KVLL 410 (456)
Q Consensus 407 ~Vll 410 (456)
.|+-
T Consensus 247 ~vid 250 (357)
T 2cf5_A 247 YVID 250 (357)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8865
No 361
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=75.98 E-value=5.2 Score=39.63 Aligned_cols=54 Identities=20% Similarity=0.169 Sum_probs=40.0
Q ss_pred HhcC-CCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 327 AVVD-PQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 327 ~~l~-~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
..++ +++|++||-.|+|+ |..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~ 243 (380)
T 1vj0_A 188 DEYPESFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAE----EIGADL 243 (380)
T ss_dssp HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHH----HcCCcE
Confidence 3456 88999999999654 445667777642 248999999999988765 478754
No 362
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=75.46 E-value=9.1 Score=31.67 Aligned_cols=70 Identities=14% Similarity=0.130 Sum_probs=46.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc---cCCCCccEEE
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---NSTVKCDKVL 409 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---~~~~~fD~Vl 409 (456)
+.+|+=+|+ |..+..+++.+.. ...|+++|.++++++.+++ .| +.++.+|...... .....+|.|+
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~----~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG----FDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT----CEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC----CcEEECCCCCHHHHHhCCcccCCEEE
Confidence 457888887 5566666665543 3589999999998877654 23 3567788765321 1124689999
Q ss_pred EcCC
Q 012783 410 LDAP 413 (456)
Q Consensus 410 lDaP 413 (456)
+-.|
T Consensus 76 ~~~~ 79 (141)
T 3llv_A 76 ITGS 79 (141)
T ss_dssp ECCS
T ss_pred EecC
Confidence 8555
No 363
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=75.39 E-value=4.8 Score=39.58 Aligned_cols=52 Identities=10% Similarity=0.093 Sum_probs=39.6
Q ss_pred hcCCCCCCeEEEEcC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 328 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 328 ~l~~~~g~~VLDlcA--GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
..++++|++||-.|| |.|..++++|... ..+|+++|.++++++.+++ +|.+.
T Consensus 158 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~ 211 (362)
T 2c0c_A 158 LGGLSEGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKS----LGCDR 211 (362)
T ss_dssp HTCCCTTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCSE
T ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHH----cCCcE
Confidence 357889999999983 4566677787775 3489999999998887654 67653
No 364
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=75.13 E-value=11 Score=34.52 Aligned_cols=80 Identities=16% Similarity=0.056 Sum_probs=53.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeC-CHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDi-s~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
|.+||=. .|+|+.+..+++.+-. ..+|++++. +++.++.+.+.++..+. .+.++..|..+.... ..
T Consensus 4 ~k~vlVT-Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 4 GKVALVT-GASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS--DAIAVRADVANAEDVTNMVKQTVDVF 80 (246)
T ss_dssp TCEEEET-TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEE-CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4566644 4568888888776543 358999998 88888877777776654 367888898653211 01
Q ss_pred CCccEEEEcCCCCC
Q 012783 403 VKCDKVLLDAPCSG 416 (456)
Q Consensus 403 ~~fD~VllDaPCSg 416 (456)
+.+|.++..+-...
T Consensus 81 g~id~lv~nAg~~~ 94 (246)
T 2uvd_A 81 GQVDILVNNAGVTK 94 (246)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 36899998765443
No 365
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=72.93 E-value=3.6 Score=39.74 Aligned_cols=51 Identities=14% Similarity=0.069 Sum_probs=37.8
Q ss_pred cCCCCCCeEEEEcC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 329 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 329 l~~~~g~~VLDlcA--GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
..+++|++||-.|+ |.|..+++++..++ .+|+++|.++++++.+++ +|.+.
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----~Ga~~ 188 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKALG--AKLIGTVSSPEKAAHAKA----LGAWE 188 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHH----HTCSE
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cCCCE
Confidence 46789999998873 33555667777653 589999999999887753 57653
No 366
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=72.58 E-value=12 Score=34.06 Aligned_cols=80 Identities=16% Similarity=0.084 Sum_probs=55.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CCC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 403 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~~ 403 (456)
+.+||=.| |+|+.+.++++.+-. ..+|+++|.+...++.+.+.++..+. .+.++.+|....... ..+
T Consensus 11 ~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 11 GKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG--QAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC--ceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 56666544 678888888876643 35899999999988887777776654 367888897653211 013
Q ss_pred CccEEEEcCCCCC
Q 012783 404 KCDKVLLDAPCSG 416 (456)
Q Consensus 404 ~fD~VllDaPCSg 416 (456)
.+|.|+..+-...
T Consensus 88 ~~d~vi~~Ag~~~ 100 (255)
T 1fmc_A 88 KVDILVNNAGGGG 100 (255)
T ss_dssp SCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 7899998665443
No 367
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=71.88 E-value=10 Score=37.22 Aligned_cols=75 Identities=15% Similarity=0.122 Sum_probs=45.4
Q ss_pred hcCCC-CCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCc
Q 012783 328 VVDPQ-PGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 405 (456)
Q Consensus 328 ~l~~~-~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~f 405 (456)
.+.+. +|++||=.|+|+ |..++++|..++ .+|+++|.++++++.++ +.+|.+.. +-..+...+.. ..+.+
T Consensus 181 ~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~---~~lGa~~v--~~~~~~~~~~~-~~~~~ 252 (366)
T 1yqd_A 181 YFGLDEPGKHIGIVGLGGLGHVAVKFAKAFG--SKVTVISTSPSKKEEAL---KNFGADSF--LVSRDQEQMQA-AAGTL 252 (366)
T ss_dssp HTTCCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCGGGHHHHH---HTSCCSEE--EETTCHHHHHH-TTTCE
T ss_pred hcCcCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH---HhcCCceE--EeccCHHHHHH-hhCCC
Confidence 34677 899999998653 344556666643 58999999998887654 24676531 11122111111 12468
Q ss_pred cEEEE
Q 012783 406 DKVLL 410 (456)
Q Consensus 406 D~Vll 410 (456)
|.|+-
T Consensus 253 D~vid 257 (366)
T 1yqd_A 253 DGIID 257 (366)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 88875
No 368
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=71.58 E-value=4.1 Score=39.26 Aligned_cols=51 Identities=14% Similarity=0.031 Sum_probs=37.9
Q ss_pred cCCCCCC-eEEEEcC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 329 VDPQPGQ-SIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 329 l~~~~g~-~VLDlcA--GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
.++++|+ +||-.|| |.|..++++|..++ .+|++++.++++++.++ .+|.+.
T Consensus 144 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~----~lGa~~ 197 (328)
T 1xa0_A 144 HGLTPERGPVLVTGATGGVGSLAVSMLAKRG--YTVEASTGKAAEHDYLR----VLGAKE 197 (328)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCTTCHHHHH----HTTCSE
T ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHH----HcCCcE
Confidence 4577886 8999987 44556777887753 57999999998887764 477764
No 369
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=71.08 E-value=14 Score=36.72 Aligned_cols=82 Identities=12% Similarity=0.064 Sum_probs=57.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCCCc--eEEEEeCCHHHHHHHHHHHHHcCC--CceEEEEecccccccc----cCCCCc
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSGQG--LVYAIDINKGRLRILNETAKLHQV--NSVIRTIHADLRTFAD----NSTVKC 405 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~~g--~V~AvDis~~rl~~l~~n~~r~g~--~~~V~~~~~Da~~~~~----~~~~~f 405 (456)
+.+||=.| |+|+.+.++++.+-..| .|+++|.++..+..+.+.+....- ...+.++.+|...... .....+
T Consensus 35 ~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 113 (399)
T 3nzo_A 35 QSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQY 113 (399)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCC
T ss_pred CCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCC
Confidence 56777665 46889999988775554 899999999988877776654321 2348889999875321 012478
Q ss_pred cEEEEcCCCCC
Q 012783 406 DKVLLDAPCSG 416 (456)
Q Consensus 406 D~VllDaPCSg 416 (456)
|.|+.-+..+.
T Consensus 114 D~Vih~Aa~~~ 124 (399)
T 3nzo_A 114 DYVLNLSALKH 124 (399)
T ss_dssp SEEEECCCCCC
T ss_pred CEEEECCCcCC
Confidence 99998665443
No 370
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=70.76 E-value=19 Score=33.95 Aligned_cols=80 Identities=13% Similarity=0.017 Sum_probs=55.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCCCc----eEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSGQG----LVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--------- 400 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~~g----~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~--------- 400 (456)
|.+||=.|+ +||.+..++..+-..| .|+.++.+.+.++.+.+.++...-...+.++.+|..+....
T Consensus 33 ~k~~lVTGa-s~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 33 KKTVLITGA-SAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TCEEEEEST-TSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCEEEEecC-CChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 667777665 5677877777653222 89999999999998888877653333478889998754320
Q ss_pred CCCCccEEEEcCCC
Q 012783 401 STVKCDKVLLDAPC 414 (456)
Q Consensus 401 ~~~~fD~VllDaPC 414 (456)
..+..|.++..+-.
T Consensus 112 ~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 112 EFKDIDILVNNAGK 125 (287)
T ss_dssp GGCSCCEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 12468999987643
No 371
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=70.67 E-value=9.7 Score=35.72 Aligned_cols=81 Identities=16% Similarity=0.026 Sum_probs=57.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccc-cc---------cCC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF-AD---------NST 402 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~-~~---------~~~ 402 (456)
+.+||=.| |+||.+.+++..+- ...+|+.++.+..+++.+.+.++..+-.+ +.++..|.... .. ...
T Consensus 12 ~k~vlITG-as~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 12 RRCAVVTG-GNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHEN-VVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp CCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCS-EEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CcEEEEec-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 55666555 55788888877653 34589999999999988888887665443 78899998764 21 011
Q ss_pred CCccEEEEcCCCCC
Q 012783 403 VKCDKVLLDAPCSG 416 (456)
Q Consensus 403 ~~fD~VllDaPCSg 416 (456)
+.+|.++..|-..+
T Consensus 90 g~iD~lv~nAg~~~ 103 (311)
T 3o26_A 90 GKLDILVNNAGVAG 103 (311)
T ss_dssp SSCCEEEECCCCCS
T ss_pred CCCCEEEECCcccc
Confidence 47899999775543
No 372
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=70.65 E-value=4.1 Score=39.73 Aligned_cols=53 Identities=11% Similarity=0.114 Sum_probs=39.6
Q ss_pred HhcCCCCCCeEEEEcC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 327 AVVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcA--GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
....+++|++||-.|| |.|..+++++..++ .+|++++.++++++.+++ +|.+.
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----~ga~~ 207 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMG--AKVIAVVNRTAATEFVKS----VGADI 207 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHH----HTCSE
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCcE
Confidence 3456789999999887 34666777777653 589999999998877654 57653
No 373
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=69.94 E-value=12 Score=34.33 Aligned_cols=80 Identities=15% Similarity=-0.020 Sum_probs=54.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeC-CHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------C
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 401 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDi-s~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~ 401 (456)
.+.+||=. .|+|+.+.++++.+-. ..+|++++. +...++.+.+.++..+. .+.++.+|..+.... .
T Consensus 20 ~~k~vlIt-GasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 20 AGKVALTT-GAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA--QGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp TTCEEEET-TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEe-CCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 35677744 4578888888876643 358999998 88888877777776654 367888998653211 0
Q ss_pred CCCccEEEEcCCCC
Q 012783 402 TVKCDKVLLDAPCS 415 (456)
Q Consensus 402 ~~~fD~VllDaPCS 415 (456)
.+.+|.|+..+-..
T Consensus 97 ~~~~d~vi~~Ag~~ 110 (274)
T 1ja9_A 97 FGGLDFVMSNSGME 110 (274)
T ss_dssp HSCEEEEECCCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 13689998866443
No 374
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=69.83 E-value=17 Score=34.15 Aligned_cols=83 Identities=16% Similarity=0.076 Sum_probs=58.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc---------cCC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------NST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---------~~~ 402 (456)
.|..+|=-|++ +|.+..+|..+- ...+|+.+|.+++.++.+.+.++..|.. +..+..|..+... ...
T Consensus 8 ~gKvalVTGas-~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~--~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 8 TGKTALVTGSA-RGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYD--AHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCC--EEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc--EEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 36666665554 567777777653 3468999999999999998888888764 6788899865321 123
Q ss_pred CCccEEEEcCCCCCCc
Q 012783 403 VKCDKVLLDAPCSGLG 418 (456)
Q Consensus 403 ~~fD~VllDaPCSg~G 418 (456)
++.|.++.+|--+..+
T Consensus 85 G~iDiLVNNAG~~~~~ 100 (255)
T 4g81_D 85 IHVDILINNAGIQYRK 100 (255)
T ss_dssp CCCCEEEECCCCCCCC
T ss_pred CCCcEEEECCCCCCCC
Confidence 6789999987444333
No 375
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=69.66 E-value=23 Score=32.79 Aligned_cols=79 Identities=18% Similarity=0.093 Sum_probs=56.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CCC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 403 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~~ 403 (456)
+.+||=.| |+|+.+..+++.+-. ..+|++++.+...++.+.+.++..+....+.++.+|....... ..+
T Consensus 32 ~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 32 DRLALVTG-ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 56677665 567788887775532 3589999999999988888888777655678888998653210 013
Q ss_pred CccEEEEcCC
Q 012783 404 KCDKVLLDAP 413 (456)
Q Consensus 404 ~fD~VllDaP 413 (456)
.+|.|+..+-
T Consensus 111 ~iD~vi~~Ag 120 (279)
T 1xg5_A 111 GVDICINNAG 120 (279)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899988653
No 376
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=69.57 E-value=1.9 Score=43.09 Aligned_cols=90 Identities=13% Similarity=0.095 Sum_probs=54.7
Q ss_pred CCeEEEEcCCCchHHHHHHHH---------------cCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccc
Q 012783 334 GQSIVDCCAAPGGKTLYMASC---------------LSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA 398 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~---------------~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~ 398 (456)
.-+|+|+||++|..|+.+.+. -.+.-+|+.+|.-..-...+-+.+..+.-.+...++.+....+-
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 367999999999988865543 13457899999988888877666543211001245555543321
Q ss_pred c--cCCCCccEEEEcCCCCCCcccccCCCc
Q 012783 399 D--NSTVKCDKVLLDAPCSGLGVLSKTCVG 426 (456)
Q Consensus 399 ~--~~~~~fD~VllDaPCSg~G~irr~p~~ 426 (456)
. ...++||.|+. +..+--+.+-|+.
T Consensus 132 ~rlfp~~S~d~v~S---s~aLHWls~~p~~ 158 (359)
T 1m6e_X 132 GRLFPRNTLHFIHS---SYSLMWLSQVPIG 158 (359)
T ss_dssp SCCSCTTCBSCEEE---ESCTTBCSSCCSC
T ss_pred hccCCCCceEEEEe---hhhhhhcccCchh
Confidence 1 12468999976 3344444454543
No 377
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=69.40 E-value=4.7 Score=38.43 Aligned_cols=49 Identities=18% Similarity=0.203 Sum_probs=37.2
Q ss_pred CCCCCeEEEEcC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 331 PQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 331 ~~~g~~VLDlcA--GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
+++|++||-.|+ |.|..+++++..++ .+|+++|.++++++.++ .+|.+.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~~ga~~ 173 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG--LRVLAAASRPEKLALPL----ALGAEE 173 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSGGGSHHHH----HTTCSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----hcCCCE
Confidence 789999999997 34556677777653 58999999999888764 367653
No 378
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=69.35 E-value=12 Score=34.68 Aligned_cols=82 Identities=13% Similarity=0.030 Sum_probs=56.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
.|.+||=.| |+||.+.+++..+-. ..+|+.+|.+.+.++.+.+.++..+-. .+.++..|..+.... ..
T Consensus 9 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 9 QGRSVVVTG-GTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSG-KVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSS-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCC-cEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 356666555 457788877776533 358999999999998888888776633 378889998753211 11
Q ss_pred CCccEEEEcCCCCC
Q 012783 403 VKCDKVLLDAPCSG 416 (456)
Q Consensus 403 ~~fD~VllDaPCSg 416 (456)
+..|.++..+-...
T Consensus 87 g~id~lvnnAg~~~ 100 (262)
T 3pk0_A 87 GGIDVVCANAGVFP 100 (262)
T ss_dssp SCCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 47899999765443
No 379
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=69.09 E-value=7.8 Score=37.71 Aligned_cols=51 Identities=16% Similarity=0.062 Sum_probs=37.4
Q ss_pred hcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012783 328 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (456)
Q Consensus 328 ~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~ 384 (456)
..++ +|++||-.|+|+ |..++++|..++ ..+|+++|.++++++.++ .+|.+
T Consensus 163 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~~~~~~----~~Ga~ 214 (348)
T 2d8a_A 163 AGPI-SGKSVLITGAGPLGLLGIAVAKASG-AYPVIVSEPSDFRRELAK----KVGAD 214 (348)
T ss_dssp TSCC-TTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHHHHHHH----HHTCS
T ss_pred hcCC-CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HhCCC
Confidence 4567 899999999854 455666776642 338999999999988765 35765
No 380
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=67.80 E-value=25 Score=32.57 Aligned_cols=80 Identities=16% Similarity=0.103 Sum_probs=55.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc----------cC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD----------NS 401 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~----------~~ 401 (456)
.|.+||=.|+ +|+.+..++..+-. ..+|++++.+++.++.+.+.++..+. .+.++..|..+... ..
T Consensus 20 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 20 KGTTALVTGG-SKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL--NVEGSVCDLLSRTERDKLMQTVAHVF 96 (273)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-cchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3567776665 67777777776532 35899999999988877777766554 36788889865321 11
Q ss_pred CCCccEEEEcCCCC
Q 012783 402 TVKCDKVLLDAPCS 415 (456)
Q Consensus 402 ~~~fD~VllDaPCS 415 (456)
.+.+|.++..+--.
T Consensus 97 ~g~id~lv~nAg~~ 110 (273)
T 1ae1_A 97 DGKLNILVNNAGVV 110 (273)
T ss_dssp TSCCCEEEECCCCC
T ss_pred CCCCcEEEECCCCC
Confidence 15789999977543
No 381
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=67.54 E-value=12 Score=36.58 Aligned_cols=52 Identities=13% Similarity=0.231 Sum_probs=38.4
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 329 VDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 329 l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
.++++|++||=.|||+ |..++++|..+.+ .+|+++|.++++++.++ .+|.+.
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~G-a~Vi~~~~~~~~~~~~~----~lGa~~ 234 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTP-ATVIALDVKEEKLKLAE----RLGADH 234 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCC-CEEEEEESSHHHHHHHH----HTTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHH----HhCCCE
Confidence 6788999999999853 3345566666522 48999999999988765 478764
No 382
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=66.97 E-value=8 Score=32.30 Aligned_cols=71 Identities=14% Similarity=0.085 Sum_probs=45.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccc---ccCCCCccEEE
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA---DNSTVKCDKVL 409 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~---~~~~~~fD~Vl 409 (456)
.++|+=+|+ |..+..+++.+.. ...|+++|.++++++.+++ .|+ .++.+|+.... ...-..+|.|+
T Consensus 7 ~~~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g~----~~i~gd~~~~~~l~~a~i~~ad~vi 76 (140)
T 3fwz_A 7 CNHALLVGY--GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RGV----RAVLGNAANEEIMQLAHLECAKWLI 76 (140)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TTC----EEEESCTTSHHHHHHTTGGGCSEEE
T ss_pred CCCEEEECc--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cCC----CEEECCCCCHHHHHhcCcccCCEEE
Confidence 457777776 4555556655432 4589999999999887654 343 46788876431 11124689999
Q ss_pred EcCCC
Q 012783 410 LDAPC 414 (456)
Q Consensus 410 lDaPC 414 (456)
+-.|-
T Consensus 77 ~~~~~ 81 (140)
T 3fwz_A 77 LTIPN 81 (140)
T ss_dssp ECCSC
T ss_pred EECCC
Confidence 85553
No 383
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=66.86 E-value=6.2 Score=38.64 Aligned_cols=52 Identities=12% Similarity=0.056 Sum_probs=35.2
Q ss_pred hcCCCCC------CeEEEEcCCC-chHH-HHHH-HHcCCCceEEEEeCCHH---HHHHHHHHHHHcCCC
Q 012783 328 VVDPQPG------QSIVDCCAAP-GGKT-LYMA-SCLSGQGLVYAIDINKG---RLRILNETAKLHQVN 384 (456)
Q Consensus 328 ~l~~~~g------~~VLDlcAGp-Ggkt-~~la-~~~~~~g~V~AvDis~~---rl~~l~~n~~r~g~~ 384 (456)
.+.+++| ++||-.|||+ |..+ +++| ..+ +..+|+++|.+++ +++.++ .+|.+
T Consensus 161 ~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~----~lGa~ 224 (357)
T 2b5w_A 161 HAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIE----ELDAT 224 (357)
T ss_dssp HHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHH----HTTCE
T ss_pred hcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHH----HcCCc
Confidence 3456789 9999999843 3344 5555 443 2234999999988 887764 47764
No 384
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=66.48 E-value=14 Score=34.00 Aligned_cols=83 Identities=12% Similarity=-0.041 Sum_probs=58.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc---------cCC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------NST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---------~~~ 402 (456)
.+.+||=.|++ ||.+..++..+-. ..+|+.+|.+.++++.+.+.++..|. .+.++.+|..+... ..
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~- 81 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG--RIVARSLDARNEDEVTAFLNAADAH- 81 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEECcCCCHHHHHHHHHHHHhh-
Confidence 35667766655 6677777775533 45899999999999998888887764 47889999865321 11
Q ss_pred CCccEEEEcCCCCCCcc
Q 012783 403 VKCDKVLLDAPCSGLGV 419 (456)
Q Consensus 403 ~~fD~VllDaPCSg~G~ 419 (456)
+..|.++..+-....+.
T Consensus 82 g~id~lv~nAg~~~~~~ 98 (252)
T 3h7a_A 82 APLEVTIFNVGANVNFP 98 (252)
T ss_dssp SCEEEEEECCCCCCCCC
T ss_pred CCceEEEECCCcCCCCC
Confidence 47899999776554443
No 385
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=66.46 E-value=7.3 Score=34.34 Aligned_cols=51 Identities=18% Similarity=0.246 Sum_probs=35.1
Q ss_pred hcCCCCCCeEEEEcCC--CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012783 328 VVDPQPGQSIVDCCAA--PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (456)
Q Consensus 328 ~l~~~~g~~VLDlcAG--pGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~ 384 (456)
..++++|++||..|++ .|..+.+++... ..+|+++|.++++++.++ .+|..
T Consensus 33 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~----~~g~~ 85 (198)
T 1pqw_A 33 VGRLSPGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLS----RLGVE 85 (198)
T ss_dssp TSCCCTTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHH----TTCCS
T ss_pred HhCCCCCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----HcCCC
Confidence 3567899999999853 344445555543 358999999999887654 35654
No 386
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=66.09 E-value=29 Score=32.03 Aligned_cols=85 Identities=13% Similarity=0.074 Sum_probs=57.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc-----cCCCCcc
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-----NSTVKCD 406 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~-----~~~~~fD 406 (456)
.|.+||=.| |+||.+..++..+- ...+|+.+|.+.+.++.+.+.+...+....+.++..|...... ...+..|
T Consensus 9 ~~k~~lVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTG-STAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 356666555 45778887777653 3458999999999998888877766544457788888765321 1125789
Q ss_pred EEEEcCCCCCCc
Q 012783 407 KVLLDAPCSGLG 418 (456)
Q Consensus 407 ~VllDaPCSg~G 418 (456)
.++..+-.+..+
T Consensus 88 ~lv~nAg~~~~~ 99 (267)
T 3t4x_A 88 ILINNLGIFEPV 99 (267)
T ss_dssp EEEECCCCCCCC
T ss_pred EEEECCCCCCCC
Confidence 999977554433
No 387
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=66.08 E-value=33 Score=32.34 Aligned_cols=82 Identities=13% Similarity=-0.035 Sum_probs=53.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEE-eccccccccc--CCCCccEE
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTI-HADLRTFADN--STVKCDKV 408 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~-~~Da~~~~~~--~~~~fD~V 408 (456)
.+.+||=.| |+|+.+.+++..+-. ..+|++++.+......+.+.+....-. .+.++ .+|....... .-..+|.|
T Consensus 10 ~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 10 EGSLVLVTG-ANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPG-RFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTT-TEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCC-ceEEEEecCCcChHHHHHHHcCCCEE
Confidence 467787655 468888888776533 358999999988776665554332112 36777 7888654321 12368999
Q ss_pred EEcCCCCC
Q 012783 409 LLDAPCSG 416 (456)
Q Consensus 409 llDaPCSg 416 (456)
+.-+..++
T Consensus 88 ih~A~~~~ 95 (342)
T 1y1p_A 88 AHIASVVS 95 (342)
T ss_dssp EECCCCCS
T ss_pred EEeCCCCC
Confidence 98776543
No 388
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=65.98 E-value=21 Score=33.02 Aligned_cols=80 Identities=14% Similarity=-0.030 Sum_probs=54.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeC-CHHHHHHHHHHHHHc-CCCceEEEEecccccc----ccc------
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDI-NKGRLRILNETAKLH-QVNSVIRTIHADLRTF----ADN------ 400 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDi-s~~rl~~l~~n~~r~-g~~~~V~~~~~Da~~~----~~~------ 400 (456)
|.+|| +..|+||.+.+++..+-. ..+|+.++. +++.++.+.+.++.. +. .+.++.+|.... ...
T Consensus 11 ~k~~l-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 11 CPAAV-ITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG--SAVLCKGDLSLSSSLLDCCEDIIDC 87 (276)
T ss_dssp CCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT--CEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCC--ceEEEeccCCCccccHHHHHHHHHH
Confidence 55666 455567888888876533 358999999 998888777776654 43 377888888754 210
Q ss_pred ---CCCCccEEEEcCCCCC
Q 012783 401 ---STVKCDKVLLDAPCSG 416 (456)
Q Consensus 401 ---~~~~fD~VllDaPCSg 416 (456)
..+.+|.++..+-...
T Consensus 88 ~~~~~g~id~lv~nAg~~~ 106 (276)
T 1mxh_A 88 SFRAFGRCDVLVNNASAYY 106 (276)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHhcCCCCEEEECCCCCC
Confidence 0136899999775443
No 389
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=65.66 E-value=2.8 Score=41.69 Aligned_cols=48 Identities=13% Similarity=-0.032 Sum_probs=36.5
Q ss_pred CCCCeEEEEcCCCchHH---HHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 332 QPGQSIVDCCAAPGGKT---LYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 332 ~~g~~VLDlcAGpGgkt---~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
++|++||=.++|.|+.+ +++|..++ .+|+++|.++++++.++ .+|.+.
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~ 219 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDG--IKLVNIVRKQEQADLLK----AQGAVH 219 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHT--CCEEEEESSHHHHHHHH----HTTCSC
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHH----hCCCcE
Confidence 78999999876666654 56666653 48999999999988776 478765
No 390
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=65.42 E-value=7 Score=37.46 Aligned_cols=50 Identities=18% Similarity=0.137 Sum_probs=35.8
Q ss_pred CCCCCC-eEEEEcC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 330 DPQPGQ-SIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 330 ~~~~g~-~VLDlcA--GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
.+++++ .||=.|| |.|..++++|..++ .+|+++|.++++++.+++ +|.+.
T Consensus 142 ~~~~~~g~VlV~Ga~G~vG~~aiqla~~~G--a~Vi~~~~~~~~~~~~~~----lGa~~ 194 (324)
T 3nx4_A 142 GIRPQDGEVVVTGASGGVGSTAVALLHKLG--YQVAAVSGRESTHGYLKS----LGANR 194 (324)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCGGGHHHHHH----HTCSE
T ss_pred ccCCCCCeEEEECCCcHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCCE
Confidence 355532 4887776 45667778888763 489999999999888754 68764
No 391
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=65.36 E-value=18 Score=33.73 Aligned_cols=84 Identities=11% Similarity=-0.022 Sum_probs=57.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
.+..||=.| |+||.+..++..+- ...+|+.++.++..++.+.+.++..+.. +.++..|..+.... ..
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 27 DKQVAIVTG-ASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLE--GRGAVLNVNDATAVDALVESTLKEF 103 (270)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCC--CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc--EEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 355666555 56778887777553 3458999999999999888888877754 56788887653210 11
Q ss_pred CCccEEEEcCCCCCCcc
Q 012783 403 VKCDKVLLDAPCSGLGV 419 (456)
Q Consensus 403 ~~fD~VllDaPCSg~G~ 419 (456)
+..|.++..+-....+.
T Consensus 104 g~iD~lvnnAg~~~~~~ 120 (270)
T 3ftp_A 104 GALNVLVNNAGITQDQL 120 (270)
T ss_dssp SCCCEEEECCCCCCCBC
T ss_pred CCCCEEEECCCCCCCCC
Confidence 47899999775444433
No 392
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=65.34 E-value=13 Score=36.01 Aligned_cols=52 Identities=12% Similarity=0.230 Sum_probs=38.1
Q ss_pred hcCCCCCCeEEEEcCC--CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012783 328 VVDPQPGQSIVDCCAA--PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (456)
Q Consensus 328 ~l~~~~g~~VLDlcAG--pGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~ 384 (456)
...+++|++||-.|+| .|..+++++..+. ..+|+++|.++++++.+++ +|.+
T Consensus 165 ~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~~~~~~~~~~~~----~g~~ 218 (347)
T 1jvb_A 165 KASLDPTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVEAAKR----AGAD 218 (347)
T ss_dssp HTTCCTTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHHHHHH----HTCS
T ss_pred hcCCCCCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCC
Confidence 3578899999999987 4445566666641 2589999999999887643 5654
No 393
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=64.79 E-value=10 Score=36.89 Aligned_cols=51 Identities=16% Similarity=0.126 Sum_probs=37.0
Q ss_pred hcCCCCCCeEEEEcC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012783 328 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (456)
Q Consensus 328 ~l~~~~g~~VLDlcA--GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~ 384 (456)
...+++|++||-.|| |.|..+++++... ..+|+++|.++++++.++ .+|.+
T Consensus 164 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~----~~g~~ 216 (347)
T 2hcy_A 164 SANLMAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFR----SIGGE 216 (347)
T ss_dssp TTTCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHH----HTTCC
T ss_pred hcCCCCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHH----HcCCc
Confidence 346789999999998 3455566666654 358999999998887654 35664
No 394
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=64.68 E-value=26 Score=32.18 Aligned_cols=84 Identities=15% Similarity=0.097 Sum_probs=56.2
Q ss_pred CCCeEEEEcCC-CchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------C
Q 012783 333 PGQSIVDCCAA-PGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 401 (456)
Q Consensus 333 ~g~~VLDlcAG-pGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~ 401 (456)
.|.+||=.|+. . |.+.+++..+- ...+|+.+|.+...++.+.+.++..+-. .+.++..|..+.... .
T Consensus 21 ~~k~vlITGasg~-GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGT-GIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLG-RVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSS-SHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSS-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCC-chHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCC-ceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 36677777663 3 45566655442 3468999999999998888888766543 488999998753211 1
Q ss_pred CCCccEEEEcCCCCCCc
Q 012783 402 TVKCDKVLLDAPCSGLG 418 (456)
Q Consensus 402 ~~~fD~VllDaPCSg~G 418 (456)
.+.+|.++..+-.+..+
T Consensus 99 ~g~id~li~~Ag~~~~~ 115 (266)
T 3o38_A 99 AGRLDVLVNNAGLGGQT 115 (266)
T ss_dssp HSCCCEEEECCCCCCCC
T ss_pred hCCCcEEEECCCcCCCC
Confidence 14789999977554433
No 395
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=64.55 E-value=5.8 Score=38.56 Aligned_cols=47 Identities=21% Similarity=0.205 Sum_probs=35.4
Q ss_pred hcCCCCCCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q 012783 328 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNE 376 (456)
Q Consensus 328 ~l~~~~g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~~rl~~l~~ 376 (456)
..++ +|++||-.|+|+ |..++++|..++ ..+|+++|.++++++.+++
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~~~~~~~ 207 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASG-AGPILVSDPNPYRLAFARP 207 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHHHGGGTT
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH
Confidence 5567 999999999854 455667777652 2389999999998877654
No 396
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=64.47 E-value=14 Score=36.90 Aligned_cols=91 Identities=12% Similarity=0.026 Sum_probs=50.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHc--------------CCCceEEEEeCCHHHHHHHHHHHHHcCC-----------CceEE
Q 012783 334 GQSIVDCCAAPGGKTLYMASCL--------------SGQGLVYAIDINKGRLRILNETAKLHQV-----------NSVIR 388 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~--------------~~~g~V~AvDis~~rl~~l~~n~~r~g~-----------~~~V~ 388 (456)
+.+|+|+|||+|..|+.+.+.+ .+.-+|+.+|+-..-...+=+.+..+.- ...-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 5789999999999999874432 1345777777766655554444332210 00011
Q ss_pred EEecccccccc--cCCCCccEEEEcCCCCCCcccccCCCcc
Q 012783 389 TIHADLRTFAD--NSTVKCDKVLLDAPCSGLGVLSKTCVGI 427 (456)
Q Consensus 389 ~~~~Da~~~~~--~~~~~fD~VllDaPCSg~G~irr~p~~~ 427 (456)
++.+....+-. ...++||.|+. ++.+--+.+.|+.+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~S---s~aLHWls~~p~~l 170 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHS---AFSLHWLSQVPESV 170 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEE---ESCTTBCSSCCGGG
T ss_pred EEEecChhhhcccCCCcceEEEEe---cceeeeeccCchhh
Confidence 22222222111 12467888876 45566666777554
No 397
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=64.29 E-value=29 Score=33.19 Aligned_cols=82 Identities=12% Similarity=0.037 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
.|.+||=.||+ ||.+.+++..+- ...+|++++.+...++.+.+.++..+....+.++..|....... ..
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 36677776655 777888777653 34589999999999998888887776544588899998753210 12
Q ss_pred CCccEEEEcCCCC
Q 012783 403 VKCDKVLLDAPCS 415 (456)
Q Consensus 403 ~~fD~VllDaPCS 415 (456)
+.+|.|+..+--.
T Consensus 86 g~id~lv~nAg~~ 98 (319)
T 3ioy_A 86 GPVSILCNNAGVN 98 (319)
T ss_dssp CCEEEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 4789999977433
No 398
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=64.22 E-value=16 Score=33.72 Aligned_cols=79 Identities=16% Similarity=0.102 Sum_probs=54.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CCC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 403 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~~ 403 (456)
|.+||=.| |+||.+..+++.+-. ..+|+.+|.+++.++.+.+.++..+. .+.++..|....... ..+
T Consensus 6 ~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 6 EKVVIITG-GSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG--QILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTT--CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 55666555 557788877776533 45899999999999888877765553 478889998753210 114
Q ss_pred CccEEEEcCCCC
Q 012783 404 KCDKVLLDAPCS 415 (456)
Q Consensus 404 ~fD~VllDaPCS 415 (456)
..|.++..+-..
T Consensus 83 ~id~lv~nAg~~ 94 (257)
T 3imf_A 83 RIDILINNAAGN 94 (257)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999976433
No 399
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=63.95 E-value=5.5 Score=38.38 Aligned_cols=51 Identities=20% Similarity=0.107 Sum_probs=37.4
Q ss_pred cCCCCCC-eEEEEcC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 329 VDPQPGQ-SIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 329 l~~~~g~-~VLDlcA--GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
.++++|+ +||-.|| |.|..++++|..++ .+|++++.++++++.+++ +|.+.
T Consensus 145 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~~----lGa~~ 198 (330)
T 1tt7_A 145 NGLSPEKGSVLVTGATGGVGGIAVSMLNKRG--YDVVASTGNREAADYLKQ----LGASE 198 (330)
T ss_dssp TTCCGGGCCEEEESTTSHHHHHHHHHHHHHT--CCEEEEESSSSTHHHHHH----HTCSE
T ss_pred cCcCCCCceEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cCCcE
Confidence 4577886 8999987 34556677777764 579999999888877653 67654
No 400
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=63.72 E-value=13 Score=35.99 Aligned_cols=50 Identities=16% Similarity=0.208 Sum_probs=39.0
Q ss_pred cCCCCCCeEEEEcC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012783 329 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (456)
Q Consensus 329 l~~~~g~~VLDlcA--GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~ 384 (456)
.++++|++||-.|+ |.|..+++++... ..+|+++|.++++++.+++ +|.+
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~ga~ 213 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKA----LGAD 213 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCS
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCC
Confidence 36789999999998 4566777777765 3589999999999987753 5665
No 401
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=63.59 E-value=17 Score=33.96 Aligned_cols=79 Identities=13% Similarity=0.019 Sum_probs=54.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CCC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 403 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~~ 403 (456)
+.+||=.|+ +||.+..++..+. ...+|+.++.+.+.++.+.+.++..+. .+.++..|....... ..+
T Consensus 4 ~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 4 DKVILITGA-SGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG--TALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCC-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 455665554 5777777777653 345899999999999988888877764 377888898653210 114
Q ss_pred CccEEEEcCCCC
Q 012783 404 KCDKVLLDAPCS 415 (456)
Q Consensus 404 ~fD~VllDaPCS 415 (456)
..|.++..+-..
T Consensus 81 ~iD~lVnnAG~~ 92 (264)
T 3tfo_A 81 RIDVLVNNAGVM 92 (264)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999976443
No 402
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=63.54 E-value=12 Score=34.14 Aligned_cols=78 Identities=14% Similarity=0.015 Sum_probs=53.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCC-HHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDIN-KGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis-~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
+.+||=. .|+|+.+.+++..+-. ..+|++++.+ +..++.+.+.++..+. .+.++.+|..+.... ..
T Consensus 7 ~k~vlVT-GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 7 GKRVLIT-GSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGG--DAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp TCEEEET-TCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTC--EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEe-CCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5677744 4568888888876543 3589999998 7777777776666553 478888998754211 01
Q ss_pred CCccEEEEcCCC
Q 012783 403 VKCDKVLLDAPC 414 (456)
Q Consensus 403 ~~fD~VllDaPC 414 (456)
+.+|.|+..+-.
T Consensus 84 g~id~vi~~Ag~ 95 (258)
T 3afn_B 84 GGIDVLINNAGG 95 (258)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999997653
No 403
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=63.35 E-value=29 Score=31.80 Aligned_cols=80 Identities=14% Similarity=0.071 Sum_probs=54.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc----------cC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD----------NS 401 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~----------~~ 401 (456)
.|.+||=.|+ +|+.+.+++..+-. ..+|++++.+++.++.+.+.++..+. .+.++.+|..+... ..
T Consensus 8 ~~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 8 EGCTALVTGG-SRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF--KVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3567776665 67787777775532 45899999999988877777766553 37788889865321 01
Q ss_pred CCCccEEEEcCCCC
Q 012783 402 TVKCDKVLLDAPCS 415 (456)
Q Consensus 402 ~~~fD~VllDaPCS 415 (456)
.+.+|.++..+-..
T Consensus 85 ~g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 85 HGKLNILVNNAGIV 98 (260)
T ss_dssp TTCCCEEEECCCCC
T ss_pred CCCCCEEEECCCCC
Confidence 15789999977543
No 404
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=63.13 E-value=22 Score=32.00 Aligned_cols=80 Identities=14% Similarity=0.028 Sum_probs=52.9
Q ss_pred eEEEEcCCCchHHHHHHHHcCCC-ceEEEE-eCCHHHHHHHHHHHHHcCCCceEEE-Eeccccccccc---------CCC
Q 012783 336 SIVDCCAAPGGKTLYMASCLSGQ-GLVYAI-DINKGRLRILNETAKLHQVNSVIRT-IHADLRTFADN---------STV 403 (456)
Q Consensus 336 ~VLDlcAGpGgkt~~la~~~~~~-g~V~Av-Dis~~rl~~l~~n~~r~g~~~~V~~-~~~Da~~~~~~---------~~~ 403 (456)
+|| +..|+|+.+.++++.+-.. ..|+++ +.++..++.+.+.++..+.. +.+ +.+|..+.... ..+
T Consensus 3 ~vl-ITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (245)
T 2ph3_A 3 KAL-ITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSP--LVAVLGANLLEAEAATALVHQAAEVLG 79 (245)
T ss_dssp EEE-ETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCS--CEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred EEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc--eEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence 455 4445788999888876544 478887 89998888777777666543 444 78887653210 014
Q ss_pred CccEEEEcCCCCCCc
Q 012783 404 KCDKVLLDAPCSGLG 418 (456)
Q Consensus 404 ~fD~VllDaPCSg~G 418 (456)
.+|.|+..+-....+
T Consensus 80 ~~d~li~~Ag~~~~~ 94 (245)
T 2ph3_A 80 GLDTLVNNAGITRDT 94 (245)
T ss_dssp CCCEEEECCCCCCCB
T ss_pred CCCEEEECCCCCCCC
Confidence 689999977554333
No 405
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=63.02 E-value=37 Score=30.77 Aligned_cols=79 Identities=10% Similarity=0.066 Sum_probs=54.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
.+.+||=.| |+|+.+.++++.+- ...+|+++|.+...++.+.+.++..+. .+.++.+|..+.... ..
T Consensus 12 ~~k~vlItG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 12 DNRVAIVTG-GAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH--DVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 356777665 56788888877653 345899999999988877777766554 378888998653211 01
Q ss_pred CCccEEEEcCCC
Q 012783 403 VKCDKVLLDAPC 414 (456)
Q Consensus 403 ~~fD~VllDaPC 414 (456)
+.+|.|+..+--
T Consensus 89 ~~id~vi~~Ag~ 100 (260)
T 3awd_A 89 GRVDILVACAGI 100 (260)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999986643
No 406
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=62.99 E-value=21 Score=32.18 Aligned_cols=79 Identities=16% Similarity=0.026 Sum_probs=52.6
Q ss_pred CeEEEEcCCCchHHHHHHHHcCC-CceEEE-EeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CCC
Q 012783 335 QSIVDCCAAPGGKTLYMASCLSG-QGLVYA-IDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 403 (456)
Q Consensus 335 ~~VLDlcAGpGgkt~~la~~~~~-~g~V~A-vDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~~ 403 (456)
.+|| +..|+|+.+.++++.+-. ..+|++ .+.++..++.+.+.++..+. .+.++.+|....... ..+
T Consensus 2 k~vl-VTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (244)
T 1edo_A 2 PVVV-VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG--QAITFGGDVSKEADVEAMMKTAIDAWG 78 (244)
T ss_dssp CEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTC--EEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred CEEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC--cEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 3455 455678888888876643 347877 48898888877777766553 377888998653210 114
Q ss_pred CccEEEEcCCCCC
Q 012783 404 KCDKVLLDAPCSG 416 (456)
Q Consensus 404 ~fD~VllDaPCSg 416 (456)
.+|.|+..+-...
T Consensus 79 ~id~li~~Ag~~~ 91 (244)
T 1edo_A 79 TIDVVVNNAGITR 91 (244)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899999765443
No 407
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=62.97 E-value=14 Score=33.41 Aligned_cols=80 Identities=14% Similarity=0.072 Sum_probs=50.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEE-eCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAI-DINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~Av-Dis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
+.+||=.| |+|+.+.++++.+-. ..+|+++ +.++..++.+.+.++..+. .+.++.+|..+.... ..
T Consensus 5 ~~~vlItG-asggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 5 GKTAIVTG-SSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGI--NVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTC--CEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CcEEEEEC-CCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 55666555 568888888776543 3578888 6777777777776666554 377888998653211 01
Q ss_pred CCccEEEEcCCCCC
Q 012783 403 VKCDKVLLDAPCSG 416 (456)
Q Consensus 403 ~~fD~VllDaPCSg 416 (456)
+.+|.|+..+-.+.
T Consensus 82 ~~~d~vi~~Ag~~~ 95 (247)
T 2hq1_A 82 GRIDILVNNAGITR 95 (247)
T ss_dssp SCCCEEEECC----
T ss_pred CCCCEEEECCCCCC
Confidence 36899999775443
No 408
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=62.40 E-value=25 Score=32.36 Aligned_cols=67 Identities=6% Similarity=0.009 Sum_probs=49.9
Q ss_pred CeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEcCC
Q 012783 335 QSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAP 413 (456)
Q Consensus 335 ~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllDaP 413 (456)
.+||=.| + |..+.++++.+-. ...|++++.++.....+.. . .++++.+|..++. ...+|.|+.-+.
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~----~~~~~~~D~~d~~---~~~~d~vi~~a~ 72 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA----S----GAEPLLWPGEEPS---LDGVTHLLISTA 72 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH----T----TEEEEESSSSCCC---CTTCCEEEECCC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh----C----CCeEEEecccccc---cCCCCEEEECCC
Confidence 5899999 5 9999999887743 3589999999887655432 2 2778889988754 357899998554
Q ss_pred C
Q 012783 414 C 414 (456)
Q Consensus 414 C 414 (456)
-
T Consensus 73 ~ 73 (286)
T 3ius_A 73 P 73 (286)
T ss_dssp C
T ss_pred c
Confidence 3
No 409
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=62.25 E-value=13 Score=35.32 Aligned_cols=81 Identities=11% Similarity=0.009 Sum_probs=55.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc---------cCCC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------NSTV 403 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---------~~~~ 403 (456)
|.+||=.| |+||.+..+++.+- ...+|+.+|.+.+.++.+.+.++..+.. .+.++.+|...... ...+
T Consensus 41 ~k~vlVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 118 (293)
T 3rih_A 41 ARSVLVTG-GTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAG-NVIGVRLDVSDPGSCADAARTVVDAFG 118 (293)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSS-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCC-cEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 55666544 56778887777653 3458999999999988888777766533 37888999875321 0124
Q ss_pred CccEEEEcCCCCC
Q 012783 404 KCDKVLLDAPCSG 416 (456)
Q Consensus 404 ~fD~VllDaPCSg 416 (456)
.+|.++..+-...
T Consensus 119 ~iD~lvnnAg~~~ 131 (293)
T 3rih_A 119 ALDVVCANAGIFP 131 (293)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 7899998775443
No 410
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=62.01 E-value=28 Score=32.45 Aligned_cols=84 Identities=13% Similarity=0.053 Sum_probs=57.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CCC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 403 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~~ 403 (456)
+.+||=.|+ +||.+..++..+- ...+|+.++.+.+.++.+.+.++..+.. +.++..|....... ..+
T Consensus 24 ~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 24 PQTAFVTGV-SSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHD--VDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp -CEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC--EEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc--EEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 567777665 5677777776553 3458999999999999888888776643 78888998753210 114
Q ss_pred CccEEEEcCCCCCCccc
Q 012783 404 KCDKVLLDAPCSGLGVL 420 (456)
Q Consensus 404 ~fD~VllDaPCSg~G~i 420 (456)
..|.++..+-....+.+
T Consensus 101 ~id~lv~nAg~~~~~~~ 117 (279)
T 3sju_A 101 PIGILVNSAGRNGGGET 117 (279)
T ss_dssp SCCEEEECCCCCCCSCG
T ss_pred CCcEEEECCCCCCCCCh
Confidence 78999998765544433
No 411
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=61.75 E-value=11 Score=36.29 Aligned_cols=54 Identities=22% Similarity=0.164 Sum_probs=39.4
Q ss_pred HhcCCCCCCeEEEEcC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 327 AVVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcA--GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
....+++|++||-.|| |.|..+++++... ..+|+++|.++++++.+. +.+|.+.
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~---~~~g~~~ 198 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLV---EELGFDG 198 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH---HTTCCSE
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH---HHcCCCE
Confidence 4567899999999887 3455666677664 349999999999887763 3467653
No 412
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=61.58 E-value=18 Score=29.23 Aligned_cols=71 Identities=20% Similarity=0.151 Sum_probs=43.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccc---ccCCCCccEEE
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA---DNSTVKCDKVL 409 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~---~~~~~~fD~Vl 409 (456)
+.+|+=+|+ |..+..++..+.. ...|+.+|.++++++.+.+ ..|. .++.+|..... ......+|.|+
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~~~~----~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA---EIDA----LVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HCSS----EEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---hcCc----EEEEcCCCCHHHHHHcCcccCCEEE
Confidence 457776665 6666666665532 3579999999988776543 2333 35566654321 11124689999
Q ss_pred EcCC
Q 012783 410 LDAP 413 (456)
Q Consensus 410 lDaP 413 (456)
+-.|
T Consensus 75 ~~~~ 78 (140)
T 1lss_A 75 AVTG 78 (140)
T ss_dssp ECCS
T ss_pred EeeC
Confidence 8654
No 413
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=61.22 E-value=43 Score=30.76 Aligned_cols=77 Identities=12% Similarity=0.006 Sum_probs=55.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
.|.+||=.|++ |+.+..++..+- ...+|+.+|.+.+.++.+.+.+...+.. +.++..|..+.... ..
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 10 TDKVVVISGVG-PALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR--ALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTCEEEEESCC-TTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC--EEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCC-cHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCc--EEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46677766664 566776666553 3458999999999999988888877643 77888998753210 12
Q ss_pred CCccEEEEcC
Q 012783 403 VKCDKVLLDA 412 (456)
Q Consensus 403 ~~fD~VllDa 412 (456)
+..|.++..+
T Consensus 87 g~id~lv~nA 96 (264)
T 3ucx_A 87 GRVDVVINNA 96 (264)
T ss_dssp SCCSEEEECC
T ss_pred CCCcEEEECC
Confidence 4789999977
No 414
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=61.09 E-value=39 Score=31.56 Aligned_cols=78 Identities=15% Similarity=0.198 Sum_probs=56.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc---------cCC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------NST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---------~~~ 402 (456)
.|..+|=-|++. |.+..+|..+- ...+|+.+|.++++++.+.+.++..|.. +.++.+|...... ...
T Consensus 6 ~gKvalVTGas~-GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~--~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 6 KNKVVIVTGAGS-GIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE--VLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC--EEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCc--EEEEEccCCCHHHHHHHHHHHHHHc
Confidence 366777777655 56666666542 3568999999999999999999888764 6788999875321 112
Q ss_pred CCccEEEEcCC
Q 012783 403 VKCDKVLLDAP 413 (456)
Q Consensus 403 ~~fD~VllDaP 413 (456)
+..|.++.+|-
T Consensus 83 G~iDiLVNNAG 93 (254)
T 4fn4_A 83 SRIDVLCNNAG 93 (254)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 57899998774
No 415
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=60.96 E-value=14 Score=33.48 Aligned_cols=79 Identities=18% Similarity=0.146 Sum_probs=51.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHH-HHcCCCceEEEEeccccccccc---------CC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETA-KLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~-~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
+.+||=.| |+|+.+.+++..+-. ..+|++++.+...++.+.+.+ +..+ ..+.++.+|..+.... ..
T Consensus 2 ~k~vlItG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (250)
T 2cfc_A 2 SRVAIVTG-ASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA--DKVLRVRADVADEGDVNAAIAATMEQF 78 (250)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTG--GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 34566555 457888888776533 358999999998887766555 3223 3478888998653211 01
Q ss_pred CCccEEEEcCCCC
Q 012783 403 VKCDKVLLDAPCS 415 (456)
Q Consensus 403 ~~fD~VllDaPCS 415 (456)
+.+|.|+..+-..
T Consensus 79 ~~id~li~~Ag~~ 91 (250)
T 2cfc_A 79 GAIDVLVNNAGIT 91 (250)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999976443
No 416
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=60.81 E-value=27 Score=32.25 Aligned_cols=82 Identities=13% Similarity=0.029 Sum_probs=55.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHH-cCCCceEEEEeccccccccc---------CC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKL-HQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r-~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
|.+||=.|+ +||.+..+++.+-. ..+|+.++.+.+.++.+.+.+.. .+. .+.++..|....... ..
T Consensus 20 ~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 20 GKRALITGA-TKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT--DVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 566665554 56777777776533 45899999999999888777765 454 378889998754210 11
Q ss_pred CCccEEEEcCCCCCCc
Q 012783 403 VKCDKVLLDAPCSGLG 418 (456)
Q Consensus 403 ~~fD~VllDaPCSg~G 418 (456)
+..|.++..+--...+
T Consensus 97 g~id~lv~nAg~~~~~ 112 (266)
T 4egf_A 97 GGLDVLVNNAGISHPQ 112 (266)
T ss_dssp TSCSEEEEECCCCCCC
T ss_pred CCCCEEEECCCcCCCC
Confidence 4789999977554433
No 417
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=60.62 E-value=6.9 Score=39.83 Aligned_cols=51 Identities=10% Similarity=0.017 Sum_probs=38.8
Q ss_pred cCCCCCCeEEEEcC-C-CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 329 VDPQPGQSIVDCCA-A-PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 329 l~~~~g~~VLDlcA-G-pGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
..+++|++||=.|| | .|..++++|..+ ..+|++++.++++++.++ .+|.+.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~----~lGa~~ 276 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICR----AMGAEA 276 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HHTCCE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHH----hhCCcE
Confidence 46789999998887 3 456677777775 358999999999988774 468764
No 418
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=59.79 E-value=46 Score=30.19 Aligned_cols=79 Identities=15% Similarity=0.085 Sum_probs=54.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CCC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 403 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~~ 403 (456)
|.+||=.|+ +||.+..++..+-. ..+|+.++.+.+.++.+.+.++..|. .+.++..|..+.... ..+
T Consensus 7 ~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 7 GKVALITGA-SSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA--KVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 566776665 57788777776533 35899999999998888777776554 377888898653210 014
Q ss_pred CccEEEEcCCCC
Q 012783 404 KCDKVLLDAPCS 415 (456)
Q Consensus 404 ~fD~VllDaPCS 415 (456)
.+|.++..+--.
T Consensus 84 ~id~lv~nAg~~ 95 (247)
T 2jah_A 84 GLDILVNNAGIM 95 (247)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999876433
No 419
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=59.42 E-value=7.5 Score=39.31 Aligned_cols=51 Identities=10% Similarity=0.061 Sum_probs=37.8
Q ss_pred cCCCCCCeEEEEcC-C-CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 329 VDPQPGQSIVDCCA-A-PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 329 l~~~~g~~VLDlcA-G-pGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
..+++|++||=.|| | .|..++++|..+ ..+|++++.++++++.++ .+|.+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~~----~lGa~~ 268 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAVR----ALGCDL 268 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCCC
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----hcCCCE
Confidence 56789999998886 2 355566677664 358999999999988764 478764
No 420
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=59.17 E-value=16 Score=35.12 Aligned_cols=52 Identities=17% Similarity=0.125 Sum_probs=36.4
Q ss_pred HhcCCCCCCeEEEEcC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012783 327 AVVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcA--GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~ 384 (456)
...++++|++||-.|| |.|..+++++... ..+|+++|.++++++.+ +.+|..
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~----~~~g~~ 192 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYL----KQIGFD 192 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHH----HHTTCS
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHH----HhcCCc
Confidence 3456889999999997 3444455555543 35899999999988766 335654
No 421
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=59.09 E-value=13 Score=35.87 Aligned_cols=53 Identities=19% Similarity=0.234 Sum_probs=38.4
Q ss_pred HhcCCCCCCeEEEEcC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012783 327 AVVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (456)
Q Consensus 327 ~~l~~~~g~~VLDlcA--GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~ 384 (456)
...++++|++||-.|| |.|..+++++... ..+|+++|.++++++.+++ .+|.+
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~---~~g~~ 203 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKT---KFGFD 203 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH---TSCCS
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HcCCc
Confidence 3457889999999987 3455566666654 3589999999998877653 35764
No 422
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=59.02 E-value=33 Score=31.51 Aligned_cols=79 Identities=19% Similarity=0.113 Sum_probs=56.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
.|..||=.|+ +||.+..++..+- ...+|+.++.+.+.++.+.+.+...+. .+.++..|....... ..
T Consensus 28 ~~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 28 SGQVAVVTGA-SRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG--EAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC--ceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 4667776654 5778888877653 345899999999999988888877764 378889998653211 11
Q ss_pred CCccEEEEcCCC
Q 012783 403 VKCDKVLLDAPC 414 (456)
Q Consensus 403 ~~fD~VllDaPC 414 (456)
+..|.|+..+-.
T Consensus 105 g~id~lv~~Ag~ 116 (262)
T 3rkr_A 105 GRCDVLVNNAGV 116 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468999986654
No 423
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=58.85 E-value=31 Score=32.11 Aligned_cols=82 Identities=11% Similarity=0.075 Sum_probs=57.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc---------cCC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------NST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---------~~~ 402 (456)
.|.+||=.| |+||.+..+++.+- ...+|+.+|.+.+.++.+.+.++..|.. +.++..|...... ...
T Consensus 25 ~gk~~lVTG-as~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 25 GGRTALVTG-SSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHD--AEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCC--EEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc--eEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 356666555 56778887777653 3458999999999999888888777653 7788899865321 012
Q ss_pred CCccEEEEcCCCCCC
Q 012783 403 VKCDKVLLDAPCSGL 417 (456)
Q Consensus 403 ~~fD~VllDaPCSg~ 417 (456)
+..|.++..+-.+..
T Consensus 102 g~iD~lv~nAg~~~~ 116 (271)
T 4ibo_A 102 IDVDILVNNAGIQFR 116 (271)
T ss_dssp CCCCEEEECCCCCCC
T ss_pred CCCCEEEECCCCCCC
Confidence 478999997754433
No 424
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=58.72 E-value=35 Score=29.42 Aligned_cols=70 Identities=17% Similarity=0.088 Sum_probs=44.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC--CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccc---ccc-CCCCccE
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG--QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF---ADN-STVKCDK 407 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~--~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~---~~~-~~~~fD~ 407 (456)
+++|+=+|+ |..+..+++.+.. ...|+++|.++++++.+++ .|.. ++.+|.... ... ....+|.
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g~~----~~~gd~~~~~~l~~~~~~~~ad~ 108 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EGRN----VISGDATDPDFWERILDTGHVKL 108 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TTCC----EEECCTTCHHHHHTBCSCCCCCE
T ss_pred CCcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CCCC----EEEcCCCCHHHHHhccCCCCCCE
Confidence 668887765 5666666665532 3479999999998876543 4543 456676432 111 1246899
Q ss_pred EEEcCC
Q 012783 408 VLLDAP 413 (456)
Q Consensus 408 VllDaP 413 (456)
|++-.|
T Consensus 109 vi~~~~ 114 (183)
T 3c85_A 109 VLLAMP 114 (183)
T ss_dssp EEECCS
T ss_pred EEEeCC
Confidence 998443
No 425
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=58.55 E-value=50 Score=30.32 Aligned_cols=83 Identities=12% Similarity=-0.021 Sum_probs=55.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHH-cCCCceEEEEeccccccccc---------CC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKL-HQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r-~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
|..||=.|+ +||.+..+++.+-. ..+|+.+|.+.+.++.+.+.+.. .+-. .+.++..|....... ..
T Consensus 8 ~k~~lVTGa-s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 8 EAVAVVTGG-SSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGA-RLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCc-eEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 566776665 46677777765532 45899999999999888888776 4433 377888998653210 11
Q ss_pred CCccEEEEcCCCCCCc
Q 012783 403 VKCDKVLLDAPCSGLG 418 (456)
Q Consensus 403 ~~fD~VllDaPCSg~G 418 (456)
+..|.++..+--+..+
T Consensus 86 g~id~lvnnAg~~~~~ 101 (265)
T 3lf2_A 86 GCASILVNNAGQGRVS 101 (265)
T ss_dssp CSCSEEEECCCCCCCB
T ss_pred CCCCEEEECCCCCCCC
Confidence 4789999977544333
No 426
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=58.47 E-value=27 Score=32.58 Aligned_cols=84 Identities=12% Similarity=0.031 Sum_probs=58.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
.|.+||=.|++ ||.+..++..+-. ..+|+.++.+.+.++.+.+.++..+.. +.++.+|..+.... ..
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK--ALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCC--CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe--EEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 36677766654 6777777776533 458999999999998888888777643 67888998654210 01
Q ss_pred CCccEEEEcCCCCCCcc
Q 012783 403 VKCDKVLLDAPCSGLGV 419 (456)
Q Consensus 403 ~~fD~VllDaPCSg~G~ 419 (456)
+..|.++..+-.+..+.
T Consensus 108 g~iD~lvnnAg~~~~~~ 124 (276)
T 3r1i_A 108 GGIDIAVCNAGIVSVQA 124 (276)
T ss_dssp SCCSEEEECCCCCCCCC
T ss_pred CCCCEEEECCCCCCCCC
Confidence 47899999775544433
No 427
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=58.42 E-value=53 Score=29.91 Aligned_cols=79 Identities=20% Similarity=0.105 Sum_probs=52.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC----CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc---------c
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG----QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------N 400 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~----~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---------~ 400 (456)
+.+||=. .|+||.+..++..+-. ..+|+.+|.+++.++.+.+.++...-...+.++..|...... .
T Consensus 6 ~k~~lVT-Gas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 6 CAVCVLT-GASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp SEEEEES-SCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CcEEEEe-CCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 4455544 4567888888887643 568999999999988887777654222347788899865321 0
Q ss_pred --CCCCcc--EEEEcCC
Q 012783 401 --STVKCD--KVLLDAP 413 (456)
Q Consensus 401 --~~~~fD--~VllDaP 413 (456)
..+.+| .++..+-
T Consensus 85 ~~~~g~~d~~~lvnnAg 101 (259)
T 1oaa_A 85 LPRPEGLQRLLLINNAA 101 (259)
T ss_dssp SCCCTTCCEEEEEECCC
T ss_pred ccccccCCccEEEECCc
Confidence 124678 7777663
No 428
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=58.36 E-value=37 Score=31.38 Aligned_cols=80 Identities=18% Similarity=0.054 Sum_probs=55.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
.+.+||=.| |+|+.+..++..+- ....|+++|.++..++.+.+.++..+. .+.++.+|..+.... ..
T Consensus 30 ~~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 30 TGEIVLITG-AGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA--KVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC--eEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 356777666 45778888877653 245899999999998888777776654 378888998653210 12
Q ss_pred CCccEEEEcCCCC
Q 012783 403 VKCDKVLLDAPCS 415 (456)
Q Consensus 403 ~~fD~VllDaPCS 415 (456)
+.+|.|+..+-..
T Consensus 107 g~iD~li~~Ag~~ 119 (272)
T 1yb1_A 107 GDVSILVNNAGVV 119 (272)
T ss_dssp CCCSEEEECCCCC
T ss_pred CCCcEEEECCCcC
Confidence 4789999976443
No 429
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=58.29 E-value=42 Score=31.31 Aligned_cols=79 Identities=13% Similarity=0.039 Sum_probs=53.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeC-CHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------C
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 401 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDi-s~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~ 401 (456)
.+..||=.|+ +||.+..+++.+-. ..+|+.+|. +.+.++.+.+.+...|.. +.++.+|..+.... .
T Consensus 28 ~~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 28 ARPVAIVTGG-RRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGAR--VIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCC--EEEEECCTTSGGGHHHHHHHHHHH
T ss_pred CCCEEEEecC-CCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCc--EEEEEecCCCHHHHHHHHHHHHHH
Confidence 4666776665 56677777765533 458999995 888888888877776643 78889998764321 0
Q ss_pred CCCccEEEEcCCC
Q 012783 402 TVKCDKVLLDAPC 414 (456)
Q Consensus 402 ~~~fD~VllDaPC 414 (456)
.+..|.++..|--
T Consensus 105 ~g~iD~lvnnAg~ 117 (280)
T 4da9_A 105 FGRIDCLVNNAGI 117 (280)
T ss_dssp HSCCCEEEEECC-
T ss_pred cCCCCEEEECCCc
Confidence 1478999997643
No 430
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=57.85 E-value=19 Score=33.09 Aligned_cols=83 Identities=13% Similarity=-0.006 Sum_probs=55.4
Q ss_pred CCCeEEEEcCCCc-hHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------C
Q 012783 333 PGQSIVDCCAAPG-GKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 401 (456)
Q Consensus 333 ~g~~VLDlcAGpG-gkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~ 401 (456)
.|.+||=.|++.| |.+..++..+- ...+|+.++.+....+.+.+..+..+-. .+.++..|..+.... .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRN-DSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSC-CCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCC-CceEEeCCCCCHHHHHHHHHHHHHH
Confidence 3677888887643 46666666543 3458999999887777777776666543 378889998753211 0
Q ss_pred CCCccEEEEcCCCCC
Q 012783 402 TVKCDKVLLDAPCSG 416 (456)
Q Consensus 402 ~~~fD~VllDaPCSg 416 (456)
.+.+|.++..+-..+
T Consensus 85 ~g~id~li~~Ag~~~ 99 (266)
T 3oig_A 85 VGVIHGIAHCIAFAN 99 (266)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred hCCeeEEEEcccccc
Confidence 147899999775544
No 431
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=57.52 E-value=8.4 Score=32.61 Aligned_cols=73 Identities=11% Similarity=-0.013 Sum_probs=38.3
Q ss_pred CCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc-CCCCccEEEEcCCCC
Q 012783 342 AAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-STVKCDKVLLDAPCS 415 (456)
Q Consensus 342 AGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~-~~~~fD~VllDaPCS 415 (456)
.|+++.+......+...-+|.-+|-++.....++..++..+... +.....+..+.... ....+|+||+|.-..
T Consensus 9 ~~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~~~~~-~v~~~~~~~~al~~l~~~~~dlvilD~~l~ 82 (164)
T 3t8y_A 9 HHSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQPDMK-VVGFAKDGLEAVEKAIELKPDVITMDIEMP 82 (164)
T ss_dssp ---------------CCEEEEEECSCHHHHHHHHHHHHTSTTEE-EEEEESSHHHHHHHHHHHCCSEEEECSSCS
T ss_pred cccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcCCCeE-EEEecCCHHHHHHHhccCCCCEEEEeCCCC
Confidence 46667666666655555689999999999999999998875322 22234444332111 124699999996544
No 432
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=57.27 E-value=34 Score=31.38 Aligned_cols=85 Identities=9% Similarity=0.028 Sum_probs=58.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
.|.+||=.|+ +||.+.+++..+-. ..+|+.+|.+.+.++.+.+.++..+.. +.++..|..+.... ..
T Consensus 11 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 11 NDAVAIVTGA-AAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK--AIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TTCEEEECSC-SSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCC--EEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc--EEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3566665555 56777777765432 458999999999999888888877643 77888998653210 01
Q ss_pred CCccEEEEcCCCCCCccc
Q 012783 403 VKCDKVLLDAPCSGLGVL 420 (456)
Q Consensus 403 ~~fD~VllDaPCSg~G~i 420 (456)
+..|.++..+--+..+.+
T Consensus 88 g~id~lv~nAg~~~~~~~ 105 (256)
T 3gaf_A 88 GKITVLVNNAGGGGPKPF 105 (256)
T ss_dssp SCCCEEEECCCCCCCCCT
T ss_pred CCCCEEEECCCCCCCCCC
Confidence 478999997755444433
No 433
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=57.25 E-value=16 Score=35.22 Aligned_cols=51 Identities=12% Similarity=0.036 Sum_probs=37.4
Q ss_pred cCCCCCCeEEEEcC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 329 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 329 l~~~~g~~VLDlcA--GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
..+++|++||-.|| |.|..+++++... ..+|+++|.++++++.++ .+|.+.
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~~ga~~ 196 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAK----EYGAEY 196 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCSE
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH----HcCCcE
Confidence 46789999999984 3355566677664 358999999999988664 467653
No 434
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=56.86 E-value=48 Score=30.69 Aligned_cols=81 Identities=15% Similarity=0.038 Sum_probs=56.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEEeccccccccc---------C
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNS-VIRTIHADLRTFADN---------S 401 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~-~V~~~~~Da~~~~~~---------~ 401 (456)
.|.+||=.|+ +||.+.+++..+- ...+|+.+|.+++.++.+.+.++..+... .+.++.+|..+.... .
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGG-GSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 3667776665 5677777777553 34589999999999998888888766432 578889998753210 1
Q ss_pred CCCccEEEEcCCC
Q 012783 402 TVKCDKVLLDAPC 414 (456)
Q Consensus 402 ~~~fD~VllDaPC 414 (456)
.+..|.++..+-.
T Consensus 89 ~g~id~lv~nAg~ 101 (281)
T 3svt_A 89 HGRLHGVVHCAGG 101 (281)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1468999997653
No 435
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=56.85 E-value=16 Score=37.45 Aligned_cols=68 Identities=19% Similarity=0.216 Sum_probs=47.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc---cCCCCccEEE
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---NSTVKCDKVL 409 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~~-g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---~~~~~fD~Vl 409 (456)
.++|+=+|| |-.+.++|+.+... ..|+.+|.++++++.+.+. ++ +.+++||+....- ..-+..|.++
T Consensus 3 ~M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~---~~----~~~i~Gd~~~~~~L~~Agi~~ad~~i 73 (461)
T 4g65_A 3 AMKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDK---YD----LRVVNGHASHPDVLHEAGAQDADMLV 73 (461)
T ss_dssp CEEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHH---SS----CEEEESCTTCHHHHHHHTTTTCSEEE
T ss_pred cCEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh---cC----cEEEEEcCCCHHHHHhcCCCcCCEEE
Confidence 456666555 56778888887554 4699999999999887654 33 4578999876421 1235688887
Q ss_pred E
Q 012783 410 L 410 (456)
Q Consensus 410 l 410 (456)
.
T Consensus 74 a 74 (461)
T 4g65_A 74 A 74 (461)
T ss_dssp E
T ss_pred E
Confidence 6
No 436
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=56.62 E-value=35 Score=31.12 Aligned_cols=78 Identities=8% Similarity=-0.027 Sum_probs=53.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc----------CC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN----------ST 402 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~----------~~ 402 (456)
+.+||=. .|+|+.+.++++.+- ....|++++.+...++.+.+.++..+. .+.++..|....... ..
T Consensus 14 ~k~vlIT-GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 14 AKTVLVT-GGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF--QVTGSVCDASLRPEREKLMQTVSSMFG 90 (266)
T ss_dssp TCEEEET-TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCEEEEE-CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 5566654 457788888877653 235899999999988887777766654 377888887653210 01
Q ss_pred CCccEEEEcCCC
Q 012783 403 VKCDKVLLDAPC 414 (456)
Q Consensus 403 ~~fD~VllDaPC 414 (456)
+.+|.|+..+--
T Consensus 91 ~~id~li~~Ag~ 102 (266)
T 1xq1_A 91 GKLDILINNLGA 102 (266)
T ss_dssp TCCSEEEEECCC
T ss_pred CCCcEEEECCCC
Confidence 478999986643
No 437
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=56.05 E-value=26 Score=31.80 Aligned_cols=79 Identities=14% Similarity=0.059 Sum_probs=56.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
.+.+||=.|+ +|+.+.++++.+-. ..+|+.+|.+.+.++.+.+.++..+. .+.++..|..+.... ..
T Consensus 8 ~~k~vlITGa-s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGS-GGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG--TAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3567776665 57777777776543 45899999999999988888877654 477888998764211 01
Q ss_pred CCccEEEEcCCC
Q 012783 403 VKCDKVLLDAPC 414 (456)
Q Consensus 403 ~~fD~VllDaPC 414 (456)
+.+|.++..+--
T Consensus 85 g~id~li~~Ag~ 96 (253)
T 3qiv_A 85 GGIDYLVNNAAI 96 (253)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 378999997643
No 438
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=56.00 E-value=56 Score=30.23 Aligned_cols=80 Identities=16% Similarity=0.089 Sum_probs=55.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc---------cCC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------NST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---------~~~ 402 (456)
.+.+||=.|+ +|+.+..++..+-. ..+|++++.+++.++.+.+.++..|. .+.++.+|..+... ...
T Consensus 21 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 21 DSEVALVTGA-TSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV--EADGRTCDVRSVPEIEALVAAVVERY 97 (277)
T ss_dssp TSCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 3567776665 57788877776533 35899999999988887777776654 36788889765321 012
Q ss_pred CCccEEEEcCCCC
Q 012783 403 VKCDKVLLDAPCS 415 (456)
Q Consensus 403 ~~fD~VllDaPCS 415 (456)
+.+|.|+..+-..
T Consensus 98 g~iD~lv~~Ag~~ 110 (277)
T 2rhc_B 98 GPVDVLVNNAGRP 110 (277)
T ss_dssp CSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4789999977443
No 439
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=55.84 E-value=32 Score=30.94 Aligned_cols=77 Identities=16% Similarity=0.106 Sum_probs=51.9
Q ss_pred CeEEEEcCCCchHHHHHHHHcCCCc--------eEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc------
Q 012783 335 QSIVDCCAAPGGKTLYMASCLSGQG--------LVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN------ 400 (456)
Q Consensus 335 ~~VLDlcAGpGgkt~~la~~~~~~g--------~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~------ 400 (456)
.+||=.| |+|+.+.+++..+-..| .|++++.+...++.+.+.++..+. .+.++.+|.......
T Consensus 3 k~vlITG-asggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~ 79 (244)
T 2bd0_A 3 HILLITG-AGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA--LTDTITADISDMADVRRLTTH 79 (244)
T ss_dssp EEEEEET-TTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTC--EEEEEECCTTSHHHHHHHHHH
T ss_pred CEEEEEC-CCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCC--eeeEEEecCCCHHHHHHHHHH
Confidence 4556444 56788888877653333 799999999988887777665443 478888998653210
Q ss_pred ---CCCCccEEEEcCCC
Q 012783 401 ---STVKCDKVLLDAPC 414 (456)
Q Consensus 401 ---~~~~fD~VllDaPC 414 (456)
..+.+|.|+..+--
T Consensus 80 ~~~~~g~id~li~~Ag~ 96 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAGV 96 (244)
T ss_dssp HHHHTSCCSEEEECCCC
T ss_pred HHHhCCCCCEEEEcCCc
Confidence 12468999986643
No 440
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=55.79 E-value=53 Score=29.88 Aligned_cols=78 Identities=13% Similarity=-0.002 Sum_probs=53.1
Q ss_pred CeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CCCC
Q 012783 335 QSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STVK 404 (456)
Q Consensus 335 ~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~~~ 404 (456)
.+||=.| |+|+.+..++..+-. ..+|++++.+++.++.+.+.++..+. .+.++..|..+.... ..+.
T Consensus 3 k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 3 KVALVTG-AGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG--HAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4556555 567788887776533 35899999999988887777766654 367888898653210 1247
Q ss_pred ccEEEEcCCCC
Q 012783 405 CDKVLLDAPCS 415 (456)
Q Consensus 405 fD~VllDaPCS 415 (456)
+|.++..+-..
T Consensus 80 id~lv~nAg~~ 90 (256)
T 1geg_A 80 FDVIVNNAGVA 90 (256)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999977443
No 441
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=55.69 E-value=17 Score=35.14 Aligned_cols=77 Identities=10% Similarity=0.031 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCC---ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc--cCCCCccE
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQ---GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD--NSTVKCDK 407 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~---g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~--~~~~~fD~ 407 (456)
.+.+||=.| |+|+.+.+++..+-.. .+|++++.++.....+.+.+. -. .+.++.+|..+... ..-..+|.
T Consensus 20 ~~k~vlVTG-atG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~---~~-~v~~~~~Dl~d~~~l~~~~~~~D~ 94 (344)
T 2gn4_A 20 DNQTILITG-GTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN---DP-RMRFFIGDVRDLERLNYALEGVDI 94 (344)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC---CT-TEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc---CC-CEEEEECCCCCHHHHHHHHhcCCE
Confidence 356777554 5789999888766433 389999999988776655442 22 37889999876432 11246899
Q ss_pred EEEcCCC
Q 012783 408 VLLDAPC 414 (456)
Q Consensus 408 VllDaPC 414 (456)
|+.-+.-
T Consensus 95 Vih~Aa~ 101 (344)
T 2gn4_A 95 CIHAAAL 101 (344)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9986643
No 442
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=55.42 E-value=43 Score=30.34 Aligned_cols=83 Identities=17% Similarity=0.040 Sum_probs=54.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeC-CHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDi-s~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
+.+||= -.|+||.+.+++..+-. ..+|+.++. +.+.++.+.+.++..+.. +.++.+|....... ..
T Consensus 4 ~k~~lV-TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 4 TKSALV-TGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVD--SFAIQANVADADEVKAMIKEVVSQF 80 (246)
T ss_dssp SCEEEE-TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSC--EEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEE-ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc--EEEEEccCCCHHHHHHHHHHHHHHc
Confidence 445554 44567888888776543 357877776 678888888888777653 67888998653210 11
Q ss_pred CCccEEEEcCCCCCCcc
Q 012783 403 VKCDKVLLDAPCSGLGV 419 (456)
Q Consensus 403 ~~fD~VllDaPCSg~G~ 419 (456)
+..|.++..+-.+..+.
T Consensus 81 g~id~lv~nAg~~~~~~ 97 (246)
T 3osu_A 81 GSLDVLVNNAGITRDNL 97 (246)
T ss_dssp SCCCEEEECCCCCCCCC
T ss_pred CCCCEEEECCCCCCCCC
Confidence 47899999876554443
No 443
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=55.11 E-value=61 Score=30.40 Aligned_cols=80 Identities=16% Similarity=0.057 Sum_probs=54.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc---------cCC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------NST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---------~~~ 402 (456)
.+.+||=.|+ +|+.+..++..+- ...+|+++|.+++.++.+.+.++..+.. +.++.+|..+... ...
T Consensus 33 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (291)
T 3cxt_A 33 KGKIALVTGA-SYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGIN--AHGYVCDVTDEDGIQAMVAQIESEV 109 (291)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCC--CEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe--EEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3567776665 5778887777653 2458999999999888877777666543 6778888765321 012
Q ss_pred CCccEEEEcCCCC
Q 012783 403 VKCDKVLLDAPCS 415 (456)
Q Consensus 403 ~~fD~VllDaPCS 415 (456)
+.+|.|+..+-..
T Consensus 110 g~iD~lvnnAg~~ 122 (291)
T 3cxt_A 110 GIIDILVNNAGII 122 (291)
T ss_dssp CCCCEEEECCCCC
T ss_pred CCCcEEEECCCcC
Confidence 4689999977443
No 444
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=55.10 E-value=34 Score=31.24 Aligned_cols=79 Identities=11% Similarity=0.044 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
.|.+||=.| |+|+.+..++..+-. ..+|++++.+++.++.+.+.++..+. .+.++..|....... ..
T Consensus 13 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (260)
T 2zat_A 13 ENKVALVTA-STDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL--SVTGTVCHVGKAEDRERLVAMAVNLH 89 (260)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 356666555 567888888776533 35899999999988877777766654 367788887643210 01
Q ss_pred CCccEEEEcCCC
Q 012783 403 VKCDKVLLDAPC 414 (456)
Q Consensus 403 ~~fD~VllDaPC 414 (456)
+.+|.++..+-.
T Consensus 90 g~iD~lv~~Ag~ 101 (260)
T 2zat_A 90 GGVDILVSNAAV 101 (260)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999987754
No 445
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=55.10 E-value=46 Score=31.28 Aligned_cols=81 Identities=12% Similarity=-0.048 Sum_probs=54.1
Q ss_pred CCCCeEEEEcCCCc-hHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc---------c
Q 012783 332 QPGQSIVDCCAAPG-GKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------N 400 (456)
Q Consensus 332 ~~g~~VLDlcAGpG-gkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---------~ 400 (456)
-.|.+||=.|++.| |.+..++..+- ...+|+.++.++...+.+++..+..+ .+.++..|..+... .
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHH
Confidence 35788998888764 56666666543 24579999999876666666666554 26788899865321 0
Q ss_pred CCCCccEEEEcCCCC
Q 012783 401 STVKCDKVLLDAPCS 415 (456)
Q Consensus 401 ~~~~fD~VllDaPCS 415 (456)
..+..|.++..+--.
T Consensus 106 ~~g~iD~lVnnAG~~ 120 (293)
T 3grk_A 106 KWGKLDFLVHAIGFS 120 (293)
T ss_dssp HTSCCSEEEECCCCC
T ss_pred hcCCCCEEEECCccC
Confidence 124789999976443
No 446
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=55.02 E-value=29 Score=32.76 Aligned_cols=81 Identities=19% Similarity=0.144 Sum_probs=54.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEEeccccccccc---------CC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVN-SVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~-~~V~~~~~Da~~~~~~---------~~ 402 (456)
|.+||=.| |+||.+..++..+- ...+|++++.+++.++.+.+.+...+.. ..+.++.+|..+.... ..
T Consensus 26 ~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 104 (297)
T 1xhl_A 26 GKSVIITG-SSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104 (297)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 55666555 56778888877653 3458999999999988887777665531 1377888998653210 01
Q ss_pred CCccEEEEcCCCC
Q 012783 403 VKCDKVLLDAPCS 415 (456)
Q Consensus 403 ~~fD~VllDaPCS 415 (456)
+.+|.++..+-..
T Consensus 105 g~iD~lvnnAG~~ 117 (297)
T 1xhl_A 105 GKIDILVNNAGAN 117 (297)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 4789999977543
No 447
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=54.88 E-value=10 Score=31.81 Aligned_cols=66 Identities=18% Similarity=0.080 Sum_probs=44.8
Q ss_pred HcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc-cCCCCccEEEEc---CCCCCCcccc
Q 012783 354 CLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-NSTVKCDKVLLD---APCSGLGVLS 421 (456)
Q Consensus 354 ~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~-~~~~~fD~VllD---aPCSg~G~ir 421 (456)
.|+.+-+|.-||=++.....++..++..|+.. + ....|+.+... .....||+|++| |-.+|..+++
T Consensus 8 ~m~k~~rILiVDD~~~~r~~l~~~L~~~G~~~-v-~~a~~g~~al~~~~~~~~DlillD~~MP~mdG~el~~ 77 (134)
T 3to5_A 8 ILNKNMKILIVDDFSTMRRIVKNLLRDLGFNN-T-QEADDGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLK 77 (134)
T ss_dssp -CCTTCCEEEECSCHHHHHHHHHHHHHTTCCC-E-EEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHH
T ss_pred HhCCCCEEEEEeCCHHHHHHHHHHHHHcCCcE-E-EEECCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHH
Confidence 34445689999999999999999999999864 3 23445433211 112479999999 4556655543
No 448
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=54.88 E-value=62 Score=30.63 Aligned_cols=74 Identities=12% Similarity=0.096 Sum_probs=46.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCC--ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEE
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQ--GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~--g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~Vll 410 (456)
.+.+||=+|+| +.+..++..+... .+|+.++.+.++.+.+.+.+...+ + +.... ..++ ...+|+|+.
T Consensus 125 ~~k~vlvlGaG--g~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~--~-~~~~~--~~~l----~~~aDiIIn 193 (281)
T 3o8q_A 125 KGATILLIGAG--GAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG--E-VKAQA--FEQL----KQSYDVIIN 193 (281)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS--C-EEEEE--GGGC----CSCEEEEEE
T ss_pred cCCEEEEECch--HHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC--C-eeEee--HHHh----cCCCCEEEE
Confidence 57899999885 4544444433323 389999999999888777765543 1 33332 2122 147899988
Q ss_pred cCCCCCCccc
Q 012783 411 DAPCSGLGVL 420 (456)
Q Consensus 411 DaPCSg~G~i 420 (456)
|++.|+.
T Consensus 194 ---aTp~gm~ 200 (281)
T 3o8q_A 194 ---STSASLD 200 (281)
T ss_dssp ---CSCCCC-
T ss_pred ---cCcCCCC
Confidence 5555553
No 449
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=54.67 E-value=20 Score=34.32 Aligned_cols=73 Identities=15% Similarity=0.104 Sum_probs=44.1
Q ss_pred HhcCCCCCCeEEEEc-CC-CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccc-ccccCCC
Q 012783 327 AVVDPQPGQSIVDCC-AA-PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FADNSTV 403 (456)
Q Consensus 327 ~~l~~~~g~~VLDlc-AG-pGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~-~~~~~~~ 403 (456)
....+++|++||=.| +| .|..++++|..++ .+|++++ +.++++. ++.+|.+.. +..+... +.... .
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G--a~vi~~~-~~~~~~~----~~~lGa~~~---i~~~~~~~~~~~~-~ 214 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKG--TTVITTA-SKRNHAF----LKALGAEQC---INYHEEDFLLAIS-T 214 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEE-CHHHHHH----HHHHTCSEE---EETTTSCHHHHCC-S
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcC--CEEEEEe-ccchHHH----HHHcCCCEE---EeCCCcchhhhhc-c
Confidence 456789999999875 33 3556777887753 4888887 4555444 455788642 2222111 22221 4
Q ss_pred CccEEEE
Q 012783 404 KCDKVLL 410 (456)
Q Consensus 404 ~fD~Vll 410 (456)
.||.|+-
T Consensus 215 g~D~v~d 221 (321)
T 3tqh_A 215 PVDAVID 221 (321)
T ss_dssp CEEEEEE
T ss_pred CCCEEEE
Confidence 6887764
No 450
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=54.57 E-value=57 Score=29.74 Aligned_cols=80 Identities=18% Similarity=0.123 Sum_probs=53.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHc-CCCceEEEEeccccccccc---------CC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLH-QVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~-g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
|.+||=.|+ +|+.+.+++..+-. ..+|++++.+++.++.+.+.++.. +. .+.++.+|..+.... ..
T Consensus 7 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 7 GKVAVITGS-SSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV--RVLEVAVDVATPEGVDAVVESVRSSF 83 (263)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC--ceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 566775554 57788887776533 358999999998887776666544 43 367888898653210 01
Q ss_pred CCccEEEEcCCCCC
Q 012783 403 VKCDKVLLDAPCSG 416 (456)
Q Consensus 403 ~~fD~VllDaPCSg 416 (456)
+.+|.|+..+-...
T Consensus 84 g~id~lv~~Ag~~~ 97 (263)
T 3ai3_A 84 GGADILVNNAGTGS 97 (263)
T ss_dssp SSCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 36899998765433
No 451
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=54.34 E-value=32 Score=32.04 Aligned_cols=81 Identities=12% Similarity=0.140 Sum_probs=56.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc--------CCC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--------STV 403 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~--------~~~ 403 (456)
.|.+||=.| |+||.+..++..+- ...+|+.+|.+++.++.+.+.+...+.. +.++..|....... ..+
T Consensus 32 ~gk~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~Dv~~~~~~~~~~~~~~~~g 108 (275)
T 4imr_A 32 RGRTALVTG-SSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGT--AQELAGDLSEAGAGTDLIERAEAIA 108 (275)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCC--EEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCe--EEEEEecCCCHHHHHHHHHHHHHhC
Confidence 366777555 55778777777653 3458999999999988888888776643 77888998653210 014
Q ss_pred CccEEEEcCCCCC
Q 012783 404 KCDKVLLDAPCSG 416 (456)
Q Consensus 404 ~fD~VllDaPCSg 416 (456)
.+|.++..+-...
T Consensus 109 ~iD~lvnnAg~~~ 121 (275)
T 4imr_A 109 PVDILVINASAQI 121 (275)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 7899999775443
No 452
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=54.15 E-value=44 Score=30.05 Aligned_cols=68 Identities=18% Similarity=0.227 Sum_probs=46.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccc---ccCCCCccEEE
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA---DNSTVKCDKVL 409 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~---~~~~~~fD~Vl 409 (456)
...+|+=+|+ |..+..+++.+...|.|+++|.++++++.+. .| +.++.+|+.... ...-...|.|+
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~-----~~----~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR-----SG----ANFVHGDPTRVSDLEKANVRGARAVI 76 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH-----TT----CEEEESCTTCHHHHHHTTCTTCSEEE
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh-----cC----CeEEEcCCCCHHHHHhcCcchhcEEE
Confidence 3457876665 6788888888866555999999999876553 23 467889986532 11135789998
Q ss_pred Ec
Q 012783 410 LD 411 (456)
Q Consensus 410 lD 411 (456)
+-
T Consensus 77 ~~ 78 (234)
T 2aef_A 77 VD 78 (234)
T ss_dssp EC
T ss_pred Ec
Confidence 83
No 453
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=53.76 E-value=18 Score=35.21 Aligned_cols=56 Identities=14% Similarity=0.234 Sum_probs=35.0
Q ss_pred hcCCCCCCeEEEEcC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 328 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 328 ~l~~~~g~~VLDlcA--GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
..++++|++||=.|| |.|..++++|..++ ...|..++.++.+-+. .+.++.+|.+.
T Consensus 162 ~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~G-a~vi~~~~~~~~~~~~-~~~~~~lGa~~ 219 (357)
T 1zsy_A 162 FEQLQPGDSVIQNASNSGVGQAVIQIAAALG-LRTINVVRDRPDIQKL-SDRLKSLGAEH 219 (357)
T ss_dssp SSCCCTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEECCCSCHHHH-HHHHHHTTCSE
T ss_pred HhccCCCCEEEEeCCcCHHHHHHHHHHHHcC-CEEEEEecCccchHHH-HHHHHhcCCcE
Confidence 357889999999987 35667778888763 3345556665432211 12345688764
No 454
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=53.70 E-value=45 Score=30.86 Aligned_cols=84 Identities=12% Similarity=-0.023 Sum_probs=56.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeC-CHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------C
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 401 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDi-s~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~ 401 (456)
.|..||=.| |+||.+.+++..+-. ..+|+.++. +...++.+.+.++..+.. +.++.+|..+.... .
T Consensus 27 ~~k~vlVTG-as~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~D~~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 27 TDRIALVTG-ASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGE--AFAVKADVSQESEVEALFAAVIER 103 (269)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC--EEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCc--EEEEECCCCCHHHHHHHHHHHHHH
Confidence 356666555 457788877776533 357888887 788888888888777653 77888998753211 1
Q ss_pred CCCccEEEEcCCCCCCcc
Q 012783 402 TVKCDKVLLDAPCSGLGV 419 (456)
Q Consensus 402 ~~~fD~VllDaPCSg~G~ 419 (456)
.+..|.++..|-.+..+.
T Consensus 104 ~g~id~lv~nAg~~~~~~ 121 (269)
T 4dmm_A 104 WGRLDVLVNNAGITRDTL 121 (269)
T ss_dssp HSCCCEEEECCCCCCCCC
T ss_pred cCCCCEEEECCCCCCCCC
Confidence 147899999875554443
No 455
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=53.67 E-value=52 Score=30.53 Aligned_cols=81 Identities=16% Similarity=0.041 Sum_probs=54.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc---------cCC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------NST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---------~~~ 402 (456)
.+..||=.|+ +|+.+..++..+-. ..+|+++|.+++.++.+.+.+...+ .+.++..|..+... ...
T Consensus 28 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 28 AGRIALVTGG-SRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG---DCQAIPADLSSEAGARRLAQALGELS 103 (276)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS---CEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---ceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 3567776665 57788877776532 4589999999988877766665444 37788888765321 012
Q ss_pred CCccEEEEcCCCCCC
Q 012783 403 VKCDKVLLDAPCSGL 417 (456)
Q Consensus 403 ~~fD~VllDaPCSg~ 417 (456)
+.+|.++..+-....
T Consensus 104 g~iD~lvnnAg~~~~ 118 (276)
T 2b4q_A 104 ARLDILVNNAGTSWG 118 (276)
T ss_dssp SCCSEEEECCCCCCC
T ss_pred CCCCEEEECCCCCCC
Confidence 478999997754433
No 456
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=53.63 E-value=54 Score=29.98 Aligned_cols=80 Identities=19% Similarity=0.137 Sum_probs=54.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
.+.+||=.|+ +|+.+..++..+-. ..+|+.++.+.+.++.+.+.++..|. .+.++.+|....... ..
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (262)
T 1zem_A 6 NGKVCLVTGA-GGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV--EARSYVCDVTSEEAVIGTVDSVVRDF 82 (262)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 3567775555 56788877776533 35899999999988887777766554 377888898653210 01
Q ss_pred CCccEEEEcCCCC
Q 012783 403 VKCDKVLLDAPCS 415 (456)
Q Consensus 403 ~~fD~VllDaPCS 415 (456)
+.+|.++..+-..
T Consensus 83 g~id~lv~nAg~~ 95 (262)
T 1zem_A 83 GKIDFLFNNAGYQ 95 (262)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4789999977543
No 457
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=53.63 E-value=85 Score=27.87 Aligned_cols=80 Identities=18% Similarity=-0.005 Sum_probs=53.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHH-HcCCCceEEEEeccccccccc---C------C
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAK-LHQVNSVIRTIHADLRTFADN---S------T 402 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~-r~g~~~~V~~~~~Da~~~~~~---~------~ 402 (456)
+.+||=.| |+||.+.++++.+-. ...|+.++.+.++++.+.+.+. ..+. .+.++..|....... . .
T Consensus 2 ~k~vlITG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 2 MKVAVITG-ASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV--EVFYHHLDVSKAESVEEFSKKVLERF 78 (235)
T ss_dssp CCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC--eEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 44566555 457788887776643 3579999999999988877765 4454 378888998754211 1 1
Q ss_pred CCccEEEEcCCCCC
Q 012783 403 VKCDKVLLDAPCSG 416 (456)
Q Consensus 403 ~~fD~VllDaPCSg 416 (456)
+.+|.++..+--+.
T Consensus 79 g~id~li~~Ag~~~ 92 (235)
T 3l77_A 79 GDVDVVVANAGLGY 92 (235)
T ss_dssp SSCSEEEECCCCCC
T ss_pred CCCCEEEECCcccc
Confidence 36899999765433
No 458
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=53.53 E-value=56 Score=30.57 Aligned_cols=62 Identities=18% Similarity=-0.009 Sum_probs=43.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHcC-CCceEEEEe-CCHHHHHHHHHHHH-HcCCCceEEEEeccccccc
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAID-INKGRLRILNETAK-LHQVNSVIRTIHADLRTFA 398 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvD-is~~rl~~l~~n~~-r~g~~~~V~~~~~Da~~~~ 398 (456)
+..||=.| |+||.+..++..+- ...+|+.++ .+.+.++.+.+.++ ..+. .+.++..|.....
T Consensus 9 ~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 9 VPVALVTG-AAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN--SAITVQADLSNVA 73 (291)
T ss_dssp CCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT--CEEEEECCCSSSC
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCC--eeEEEEeecCCcc
Confidence 55666555 55778888877653 345899999 99998888777775 4453 3778888886543
No 459
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=53.34 E-value=22 Score=36.35 Aligned_cols=79 Identities=18% Similarity=0.129 Sum_probs=53.6
Q ss_pred HHHHhcCC--CCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccc---
Q 012783 324 LVVAVVDP--QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA--- 398 (456)
Q Consensus 324 lv~~~l~~--~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~--- 398 (456)
.+...+.. ++-.+|+=+| -|..+..+|+.+.+...|.-+|.++++++.+.+.+ ++ +.+++||++...
T Consensus 223 ~~~~~~g~~~~~~~~v~I~G--gG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l-----~~-~~Vi~GD~td~~~L~ 294 (461)
T 4g65_A 223 SVMSELQRLEKPYRRIMIVG--GGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL-----EN-TIVFCGDAADQELLT 294 (461)
T ss_dssp HHHHHTTGGGSCCCEEEEEC--CSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC-----TT-SEEEESCTTCHHHHH
T ss_pred HHHHhhccccccccEEEEEc--chHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC-----CC-ceEEeccccchhhHh
Confidence 33444443 3456776655 55667788888888889999999999999887763 33 568999997632
Q ss_pred ccCCCCccEEEE
Q 012783 399 DNSTVKCDKVLL 410 (456)
Q Consensus 399 ~~~~~~fD~Vll 410 (456)
...-...|.++.
T Consensus 295 ee~i~~~D~~ia 306 (461)
T 4g65_A 295 EENIDQVDVFIA 306 (461)
T ss_dssp HTTGGGCSEEEE
T ss_pred hcCchhhcEEEE
Confidence 111235677765
No 460
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=53.03 E-value=33 Score=32.13 Aligned_cols=80 Identities=15% Similarity=0.049 Sum_probs=54.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
.|.+||=.| |+||.+..+++.+- ...+|+.+|.+.+.++.+.+.+...+-. .+.++..|..+.... ..
T Consensus 32 ~gk~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (281)
T 4dry_A 32 EGRIALVTG-GGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGN-IVRAVVCDVGDPDQVAALFAAVRAEF 109 (281)
T ss_dssp --CEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-eEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 356666555 45778888877653 3458999999999998888777665443 257888998654210 11
Q ss_pred CCccEEEEcCCC
Q 012783 403 VKCDKVLLDAPC 414 (456)
Q Consensus 403 ~~fD~VllDaPC 414 (456)
+..|.++..+-.
T Consensus 110 g~iD~lvnnAG~ 121 (281)
T 4dry_A 110 ARLDLLVNNAGS 121 (281)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999997643
No 461
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=52.77 E-value=46 Score=30.80 Aligned_cols=83 Identities=22% Similarity=0.085 Sum_probs=56.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeC-------------CHHHHHHHHHHHHHcCCCceEEEEeccccccc
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDI-------------NKGRLRILNETAKLHQVNSVIRTIHADLRTFA 398 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDi-------------s~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~ 398 (456)
.|.+||=.|++ ||.+.+++..+- ...+|+.+|. +++.++.+.+.++..|.. +.++..|.....
T Consensus 14 ~gk~~lVTGas-~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Dv~~~~ 90 (280)
T 3pgx_A 14 QGRVAFITGAA-RGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRK--ALTRVLDVRDDA 90 (280)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCC--EEEEECCTTCHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCe--EEEEEcCCCCHH
Confidence 46677766655 667777776553 3458999998 788888888877776643 778888986532
Q ss_pred cc---------CCCCccEEEEcCCCCCCc
Q 012783 399 DN---------STVKCDKVLLDAPCSGLG 418 (456)
Q Consensus 399 ~~---------~~~~fD~VllDaPCSg~G 418 (456)
.. ..+..|.++..+--...+
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~ 119 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGVLSWG 119 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCCCB
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 10 114789999976544433
No 462
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=52.76 E-value=72 Score=29.58 Aligned_cols=79 Identities=15% Similarity=0.064 Sum_probs=53.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHc-CCCceEEEEecccccccc---------cCC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLH-QVNSVIRTIHADLRTFAD---------NST 402 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~-g~~~~V~~~~~Da~~~~~---------~~~ 402 (456)
|.+||=.|+ +|+.+.+++..+-. ..+|++++.+...++.+.+.++.. +. .+.++.+|...... ...
T Consensus 26 ~k~vlITGa-sggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 26 GKVAFITGG-GTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN--KVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS--CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--ceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 567776664 57788888776533 358999999998888776666544 43 37888999865321 012
Q ss_pred CCccEEEEcCCCC
Q 012783 403 VKCDKVLLDAPCS 415 (456)
Q Consensus 403 ~~fD~VllDaPCS 415 (456)
+.+|.|+..+-.+
T Consensus 103 g~id~li~~Ag~~ 115 (302)
T 1w6u_A 103 GHPNIVINNAAGN 115 (302)
T ss_dssp CSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689999976543
No 463
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=52.74 E-value=49 Score=30.86 Aligned_cols=77 Identities=14% Similarity=0.074 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc-----CCCCcc
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-----STVKCD 406 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~-----~~~~fD 406 (456)
.|.+||=.|+ +||.+.+++..+-. ..+|+.++.+...++.+.+.+ ...+.++..|....... .-+..|
T Consensus 15 ~gk~vlVTGa-s~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~~iD 88 (291)
T 3rd5_A 15 AQRTVVITGA-NSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGVSGAD 88 (291)
T ss_dssp TTCEEEEECC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence 4667776665 57788887776533 458999999998877654432 33588899998754221 114789
Q ss_pred EEEEcCCCC
Q 012783 407 KVLLDAPCS 415 (456)
Q Consensus 407 ~VllDaPCS 415 (456)
.++..|--.
T Consensus 89 ~lv~nAg~~ 97 (291)
T 3rd5_A 89 VLINNAGIM 97 (291)
T ss_dssp EEEECCCCC
T ss_pred EEEECCcCC
Confidence 999876443
No 464
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=52.67 E-value=28 Score=33.34 Aligned_cols=51 Identities=14% Similarity=0.095 Sum_probs=37.9
Q ss_pred hcCCCCCCeEEEEcC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012783 328 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (456)
Q Consensus 328 ~l~~~~g~~VLDlcA--GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~ 384 (456)
..++++|++||-.|| |.|..+++++... ..+|+++|.++++++.+++ +|.+
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~g~~ 192 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARK----LGCH 192 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCS
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCC
Confidence 346789999999885 4555666777664 3589999999998887754 4654
No 465
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=52.51 E-value=52 Score=29.61 Aligned_cols=81 Identities=15% Similarity=0.101 Sum_probs=53.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceE-EEEecccccccccC--------C
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVI-RTIHADLRTFADNS--------T 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V-~~~~~Da~~~~~~~--------~ 402 (456)
.+.+||=.| |+|+.+.+++..+.. ..+|++++.+++.++.+.+.+ +. .+ .++.+|..+..... .
T Consensus 10 ~~k~vlITG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (254)
T 2wsb_A 10 DGACAAVTG-AGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GA--AVAARIVADVTDAEAMTAAAAEAEAV 83 (254)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GG--GEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cc--cceeEEEEecCCHHHHHHHHHHHHhh
Confidence 356777665 467888888776543 358999999998877665544 32 24 77888876532110 1
Q ss_pred CCccEEEEcCCCCCCcc
Q 012783 403 VKCDKVLLDAPCSGLGV 419 (456)
Q Consensus 403 ~~fD~VllDaPCSg~G~ 419 (456)
+.+|.|+..+-....+.
T Consensus 84 ~~id~li~~Ag~~~~~~ 100 (254)
T 2wsb_A 84 APVSILVNSAGIARLHD 100 (254)
T ss_dssp SCCCEEEECCCCCCCBC
T ss_pred CCCcEEEECCccCCCCC
Confidence 46899999876554443
No 466
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=52.25 E-value=67 Score=29.62 Aligned_cols=83 Identities=17% Similarity=0.109 Sum_probs=55.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeC-------------CHHHHHHHHHHHHHcCCCceEEEEeccccccc
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDI-------------NKGRLRILNETAKLHQVNSVIRTIHADLRTFA 398 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDi-------------s~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~ 398 (456)
.|..||=.|+ +||.+..++..+- ...+|+.+|. +.+.++.+.+.++..+. .+.++..|.....
T Consensus 10 ~~k~~lVTGa-s~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~ 86 (277)
T 3tsc_A 10 EGRVAFITGA-ARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR--RIVAAVVDTRDFD 86 (277)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC--CEEEEECCTTCHH
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC--eEEEEECCCCCHH
Confidence 4667776665 4667777776553 3458999998 77888877777776664 3778889987542
Q ss_pred cc---------CCCCccEEEEcCCCCCCc
Q 012783 399 DN---------STVKCDKVLLDAPCSGLG 418 (456)
Q Consensus 399 ~~---------~~~~fD~VllDaPCSg~G 418 (456)
.. ..+..|.++..+-....+
T Consensus 87 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~ 115 (277)
T 3tsc_A 87 RLRKVVDDGVAALGRLDIIVANAGVAAPQ 115 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 11 014689999977544433
No 467
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=52.12 E-value=24 Score=34.30 Aligned_cols=51 Identities=12% Similarity=0.035 Sum_probs=36.9
Q ss_pred hcCCCCCCeEEEEcC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012783 328 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (456)
Q Consensus 328 ~l~~~~g~~VLDlcA--GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~ 384 (456)
..++++|++||-.|| |.|..+++++... ..+|+++|.++++++.++ .+|.+
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~~ga~ 217 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVL----QNGAH 217 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCS
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHH----HcCCC
Confidence 456789999999997 3344555666654 358999999999888553 46765
No 468
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=51.83 E-value=22 Score=28.65 Aligned_cols=66 Identities=8% Similarity=0.049 Sum_probs=37.5
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEE
Q 012783 329 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKV 408 (456)
Q Consensus 329 l~~~~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~V 408 (456)
+....-.+|| ++||.|.-|..++.. .+++.++..|+++ +.+...+..++.... ..+|.|
T Consensus 13 ~~~~~~~kIl-vvC~sG~gTS~m~~~------------------kl~~~~~~~gi~~-~~i~~~~~~~~~~~~-~~~DlI 71 (110)
T 3czc_A 13 MGRGSMVKVL-TACGNGMGSSMVIKM------------------KVENALRQLGVSD-IESASCSVGEAKGLA-SNYDIV 71 (110)
T ss_dssp -----CEEEE-EECCCCHHHHHHHHH------------------HHHHHHHHTTCCC-EEEEEECHHHHHHHG-GGCSEE
T ss_pred ccccCCcEEE-EECCCcHHHHHHHHH------------------HHHHHHHHcCCCe-EEEEEeeHHHHhhcc-CCCcEE
Confidence 3333345677 788888777666652 3445667777752 334455554443322 358999
Q ss_pred EEcCCCC
Q 012783 409 LLDAPCS 415 (456)
Q Consensus 409 llDaPCS 415 (456)
++-+|-.
T Consensus 72 i~t~~l~ 78 (110)
T 3czc_A 72 VASNHLI 78 (110)
T ss_dssp EEETTTG
T ss_pred EECCchH
Confidence 9877654
No 469
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=51.76 E-value=16 Score=31.94 Aligned_cols=70 Identities=20% Similarity=0.157 Sum_probs=48.5
Q ss_pred EEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---C--CCCccEEEEc
Q 012783 337 IVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---S--TVKCDKVLLD 411 (456)
Q Consensus 337 VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---~--~~~fD~VllD 411 (456)
||=.| |+|+.+.++++.+-.. +|++++.++..++.+.+.+. . .++.+|..+.... . .+.+|.|+..
T Consensus 3 vlVtG-asg~iG~~la~~l~~~-~V~~~~r~~~~~~~~~~~~~-----~--~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 73 (207)
T 2yut_A 3 VLITG-ATGGLGGAFARALKGH-DLLLSGRRAGALAELAREVG-----A--RALPADLADELEAKALLEEAGPLDLLVHA 73 (207)
T ss_dssp EEEET-TTSHHHHHHHHHTTTS-EEEEECSCHHHHHHHHHHHT-----C--EECCCCTTSHHHHHHHHHHHCSEEEEEEC
T ss_pred EEEEc-CCcHHHHHHHHHHHhC-CEEEEECCHHHHHHHHHhcc-----C--cEEEeeCCCHHHHHHHHHhcCCCCEEEEC
Confidence 44444 6789999999988777 99999999988876655442 1 5677887653211 1 1378999986
Q ss_pred CCCC
Q 012783 412 APCS 415 (456)
Q Consensus 412 aPCS 415 (456)
+-.+
T Consensus 74 ag~~ 77 (207)
T 2yut_A 74 VGKA 77 (207)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 6443
No 470
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=51.68 E-value=59 Score=30.92 Aligned_cols=84 Identities=20% Similarity=0.133 Sum_probs=55.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCC------------HHHHHHHHHHHHHcCCCceEEEEecccccccc
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDIN------------KGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis------------~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~ 399 (456)
.|.+||=.|+ +||.+..++..+- ...+|+.+|.+ .+.++.+.+.++..|.. +.++..|......
T Consensus 45 ~gk~~lVTGa-s~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Dv~d~~~ 121 (317)
T 3oec_A 45 QGKVAFITGA-ARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRR--IIARQADVRDLAS 121 (317)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCC--EEEEECCTTCHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCe--EEEEECCCCCHHH
Confidence 3566665554 5677777777653 34589999986 77777777777776643 7788899865321
Q ss_pred c---------CCCCccEEEEcCCCCCCcc
Q 012783 400 N---------STVKCDKVLLDAPCSGLGV 419 (456)
Q Consensus 400 ~---------~~~~fD~VllDaPCSg~G~ 419 (456)
. ..+.+|.++..+-.+..+.
T Consensus 122 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~ 150 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDILVSNVGISNQGE 150 (317)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 0 1147899999776554443
No 471
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=51.54 E-value=22 Score=28.63 Aligned_cols=56 Identities=14% Similarity=0.095 Sum_probs=39.1
Q ss_pred CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc-cCCCCccEEEEcCCCCC
Q 012783 357 GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-NSTVKCDKVLLDAPCSG 416 (456)
Q Consensus 357 ~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~-~~~~~fD~VllDaPCSg 416 (456)
...+|.-+|-++.....++..++..|+. +. ...+...... .....+|+|++|. ..+
T Consensus 3 ~~~~iLivdd~~~~~~~l~~~L~~~g~~--v~-~~~~~~~a~~~l~~~~~dlvi~d~-~~~ 59 (142)
T 2qxy_A 3 LTPTVMVVDESRITFLAVKNALEKDGFN--VI-WAKNEQEAFTFLRREKIDLVFVDV-FEG 59 (142)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHGGGTCE--EE-EESSHHHHHHHHTTSCCSEEEEEC-TTT
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHhCCCE--EE-EECCHHHHHHHHhccCCCEEEEeC-CCC
Confidence 3467999999999999999999988873 43 3444333211 1235799999997 543
No 472
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=51.51 E-value=28 Score=31.23 Aligned_cols=73 Identities=15% Similarity=0.107 Sum_probs=46.7
Q ss_pred EEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccc------ccCCCCccEEE
Q 012783 337 IVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA------DNSTVKCDKVL 409 (456)
Q Consensus 337 VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~------~~~~~~fD~Vl 409 (456)
||=.| |+||.+..++..+- ...+|+.++.+++.++.+.+.+ + ..+.++..|..... ......+|.|+
T Consensus 4 vlVTG-as~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv 77 (230)
T 3guy_A 4 IVITG-ASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---S--NNVGYRARDLASHQEVEQLFEQLDSIPSTVV 77 (230)
T ss_dssp EEEES-TTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---S--SCCCEEECCTTCHHHHHHHHHSCSSCCSEEE
T ss_pred EEEec-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---h--hccCeEeecCCCHHHHHHHHHHHhhcCCEEE
Confidence 44444 45778887777653 2458999999998887665433 2 23667888876532 12234569998
Q ss_pred EcCCCC
Q 012783 410 LDAPCS 415 (456)
Q Consensus 410 lDaPCS 415 (456)
..+--+
T Consensus 78 ~~Ag~~ 83 (230)
T 3guy_A 78 HSAGSG 83 (230)
T ss_dssp ECCCCC
T ss_pred EeCCcC
Confidence 866433
No 473
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=51.12 E-value=16 Score=29.64 Aligned_cols=56 Identities=21% Similarity=0.279 Sum_probs=29.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCCCccEEEEc
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~~fD~VllD 411 (456)
+..+||=+|+ .|.-|..++..| ++.++..|++ +.+.......+.... ..||+||+=
T Consensus 5 ~~mkIlL~C~-aGmSTsllv~km-------------------~~~a~~~gi~--v~i~a~~~~~~~~~~-~~~DvvLLg 60 (108)
T 3nbm_A 5 KELKVLVLCA-GSGTSAQLANAI-------------------NEGANLTEVR--VIANSGAYGAHYDIM-GVYDLIILA 60 (108)
T ss_dssp CCEEEEEEES-SSSHHHHHHHHH-------------------HHHHHHHTCS--EEEEEEETTSCTTTG-GGCSEEEEC
T ss_pred cCceEEEECC-CCCCHHHHHHHH-------------------HHHHHHCCCc--eEEEEcchHHHHhhc-cCCCEEEEC
Confidence 3457775555 455555576654 2335556776 444332222222221 458999993
No 474
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=50.59 E-value=57 Score=29.90 Aligned_cols=81 Identities=14% Similarity=0.053 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
.+..||=.|+ +||.+.+++..+-. ..+|+.++.+++.++.+.+.+........+.++.+|..+.... ..
T Consensus 12 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 12 TDRVVLITGG-GSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3567776665 57788877776533 3589999999998887777766541112377888898653210 01
Q ss_pred CCccEEEEcCCC
Q 012783 403 VKCDKVLLDAPC 414 (456)
Q Consensus 403 ~~fD~VllDaPC 414 (456)
+.+|.++..+-.
T Consensus 91 g~id~lv~nAg~ 102 (267)
T 1iy8_A 91 GRIDGFFNNAGI 102 (267)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 368999997643
No 475
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=50.45 E-value=32 Score=27.56 Aligned_cols=55 Identities=13% Similarity=0.074 Sum_probs=40.0
Q ss_pred CceEEEEeCCHHHHHHHHHHHHH-cCCCceEEEEeccccccccc-CC-CCccEEEEcCCCC
Q 012783 358 QGLVYAIDINKGRLRILNETAKL-HQVNSVIRTIHADLRTFADN-ST-VKCDKVLLDAPCS 415 (456)
Q Consensus 358 ~g~V~AvDis~~rl~~l~~n~~r-~g~~~~V~~~~~Da~~~~~~-~~-~~fD~VllDaPCS 415 (456)
..+|.-+|-++.....++..++. .|+. |. ...+..+.... .. ..+|+|++|.-..
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~~~~~--v~-~~~~~~~a~~~l~~~~~~dlvi~D~~l~ 61 (140)
T 3lua_A 4 DGTVLLIDYFEYEREKTKIIFDNIGEYD--FI-EVENLKKFYSIFKDLDSITLIIMDIAFP 61 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHHCCCE--EE-EECSHHHHHTTTTTCCCCSEEEECSCSS
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhccCcc--EE-EECCHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 46899999999999999999998 7773 43 44454433222 23 5799999998665
No 476
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=50.30 E-value=34 Score=27.22 Aligned_cols=54 Identities=11% Similarity=0.053 Sum_probs=38.6
Q ss_pred CceEEEEeCCHHHHHHHHHHHHHcC-CCceEEEEeccccccccc-CCCCccEEEEcCCC
Q 012783 358 QGLVYAIDINKGRLRILNETAKLHQ-VNSVIRTIHADLRTFADN-STVKCDKVLLDAPC 414 (456)
Q Consensus 358 ~g~V~AvDis~~rl~~l~~n~~r~g-~~~~V~~~~~Da~~~~~~-~~~~fD~VllDaPC 414 (456)
..+|.-+|-++.....++..++..| +. +. ...+..+.... ....+|+|++|.-.
T Consensus 14 ~~~ilivdd~~~~~~~l~~~L~~~g~~~--v~-~~~~~~~a~~~l~~~~~dlvi~D~~l 69 (135)
T 3snk_A 14 RKQVALFSSDPNFKRDVATRLDALAIYD--VR-VSETDDFLKGPPADTRPGIVILDLGG 69 (135)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHTSSEE--EE-EECGGGGGGCCCTTCCCSEEEEEEET
T ss_pred CcEEEEEcCCHHHHHHHHHHHhhcCCeE--EE-EeccHHHHHHHHhccCCCEEEEeCCC
Confidence 4589999999999999999999988 63 33 34444433221 23579999999643
No 477
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=50.27 E-value=22 Score=34.85 Aligned_cols=71 Identities=20% Similarity=0.150 Sum_probs=49.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc--cCCCCccEEEEc
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD--NSTVKCDKVLLD 411 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~--~~~~~fD~VllD 411 (456)
.++||=+|| |..+..+++.+.....|+..|++.++++.+++. +..+..|+.+... ..-..+|+|+.=
T Consensus 16 ~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~---------~~~~~~d~~d~~~l~~~~~~~DvVi~~ 84 (365)
T 3abi_A 16 HMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKEF---------ATPLKVDASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTTT---------SEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred ccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhcc---------CCcEEEecCCHHHHHHHHhCCCEEEEe
Confidence 467999987 788888888887788999999999988766432 3345566654321 111468998886
Q ss_pred CCCC
Q 012783 412 APCS 415 (456)
Q Consensus 412 aPCS 415 (456)
+|-+
T Consensus 85 ~p~~ 88 (365)
T 3abi_A 85 LPGF 88 (365)
T ss_dssp CCGG
T ss_pred cCCc
Confidence 6543
No 478
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=49.98 E-value=29 Score=28.01 Aligned_cols=57 Identities=11% Similarity=0.132 Sum_probs=40.1
Q ss_pred CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc-cCCCCccEEEEcCCCC
Q 012783 358 QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-NSTVKCDKVLLDAPCS 415 (456)
Q Consensus 358 ~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~-~~~~~fD~VllDaPCS 415 (456)
..+|.-+|-++.....++..++..|....+ ....+..+... .....+|+|++|.-..
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~~~v-~~~~~~~~a~~~l~~~~~dlii~D~~l~ 62 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIRRVLDRKDIHCQL-EFVDNGAKALYQVQQAKYDLIILDIGLP 62 (144)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCCEEE-EEESSHHHHHHHHTTCCCSEEEECTTCG
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCeeE-EEECCHHHHHHHhhcCCCCEEEEeCCCC
Confidence 458999999999999999999999886323 33344433221 1235799999997654
No 479
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=49.70 E-value=44 Score=30.33 Aligned_cols=79 Identities=16% Similarity=0.048 Sum_probs=53.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeC-CHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDi-s~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
+.+||=.| |+|+.+.+++..+- ...+|++++. +...++.+.+.++..+. .+.++.+|....... ..
T Consensus 7 ~k~vlITG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 7 GKVVVITG-SSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG--EAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 55666555 56788888877553 3458999999 88888877777766553 377888898653210 01
Q ss_pred CCccEEEEcCCCC
Q 012783 403 VKCDKVLLDAPCS 415 (456)
Q Consensus 403 ~~fD~VllDaPCS 415 (456)
+.+|.|+..+-..
T Consensus 84 g~id~li~~Ag~~ 96 (261)
T 1gee_A 84 GKLDVMINNAGLE 96 (261)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999976543
No 480
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=49.63 E-value=63 Score=30.14 Aligned_cols=80 Identities=15% Similarity=0.013 Sum_probs=55.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
.+..||=.|+ +||.+..++..+- ...+|+.+|.+.+.++.+.+.+...+. .+.++..|....... ..
T Consensus 27 ~~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 27 PSPVALITGA-GSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG--QAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp CCCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3667776665 5667777776553 345899999999999888887765554 377888998653210 11
Q ss_pred CCccEEEEcCCCC
Q 012783 403 VKCDKVLLDAPCS 415 (456)
Q Consensus 403 ~~fD~VllDaPCS 415 (456)
+..|.++..+--.
T Consensus 104 g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 104 GHLDIVVANAGIN 116 (283)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4789999977543
No 481
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=49.26 E-value=23 Score=29.46 Aligned_cols=78 Identities=17% Similarity=0.154 Sum_probs=45.6
Q ss_pred HHHhcCCCCCCeEEEEcCCCchHHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccccCCC
Q 012783 325 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 403 (456)
Q Consensus 325 v~~~l~~~~g~~VLDlcAGpGgkt~~la~~~~~~-g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~~~~ 403 (456)
++..+....+.+|+=+|+ |+.+..++..+... ..|+.+|.++++.+.+.+. +|.. + ....+..+.. .
T Consensus 12 a~~~~~~~~~~~v~iiG~--G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~---~~~~--~-~~~~~~~~~~----~ 79 (144)
T 3oj0_A 12 VYDIVRKNGGNKILLVGN--GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEK---YEYE--Y-VLINDIDSLI----K 79 (144)
T ss_dssp HHHHHHHHCCCEEEEECC--SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHH---HTCE--E-EECSCHHHHH----H
T ss_pred HHHHHHhccCCEEEEECC--CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHH---hCCc--e-EeecCHHHHh----c
Confidence 344444445899999987 56666666655433 3599999999988765443 4432 1 1222322211 2
Q ss_pred CccEEEEcCCC
Q 012783 404 KCDKVLLDAPC 414 (456)
Q Consensus 404 ~fD~VllDaPC 414 (456)
.+|.|+.-.|.
T Consensus 80 ~~Divi~at~~ 90 (144)
T 3oj0_A 80 NNDVIITATSS 90 (144)
T ss_dssp TCSEEEECSCC
T ss_pred CCCEEEEeCCC
Confidence 47888774443
No 482
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=48.94 E-value=60 Score=29.89 Aligned_cols=81 Identities=15% Similarity=0.061 Sum_probs=53.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHH-HHcCCCceEEEEeccccccccc---------C
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETA-KLHQVNSVIRTIHADLRTFADN---------S 401 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~-~r~g~~~~V~~~~~Da~~~~~~---------~ 401 (456)
.+..||=.|+ +|+.+..++..+-. ..+|++++.++..++.+.+.+ +..+. .+.++.+|....... .
T Consensus 20 ~~k~~lVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 20 RGRVALVTGG-SRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV--ETMAFRCDVSNYEEVKKLLEAVKEK 96 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3566776664 57788887776533 358999999999888776666 44454 367788888653210 0
Q ss_pred CCCccEEEEcCCCCC
Q 012783 402 TVKCDKVLLDAPCSG 416 (456)
Q Consensus 402 ~~~fD~VllDaPCSg 416 (456)
.+.+|.++..+-...
T Consensus 97 ~g~iD~lvnnAg~~~ 111 (267)
T 1vl8_A 97 FGKLDTVVNAAGINR 111 (267)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred cCCCCEEEECCCcCC
Confidence 146899999765443
No 483
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=48.17 E-value=37 Score=33.88 Aligned_cols=75 Identities=16% Similarity=0.085 Sum_probs=49.6
Q ss_pred eEEEEcCCCchHHHHHHHHcCCCc----eEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc---cCC-CCccE
Q 012783 336 SIVDCCAAPGGKTLYMASCLSGQG----LVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---NST-VKCDK 407 (456)
Q Consensus 336 ~VLDlcAGpGgkt~~la~~~~~~g----~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---~~~-~~fD~ 407 (456)
+|+=+|| |+.+..++..+...+ .|+.+|.+.++++.+.+.+...+-. .+.++..|+..... ... ..+|+
T Consensus 3 kVlIiGa--GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~-~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 3 KVLQIGA--GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYG-EIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp EEEEECC--SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCC-CCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCC-ceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 6777777 678888877664444 8999999999998887776654322 25677777754321 110 13799
Q ss_pred EEEcCC
Q 012783 408 VLLDAP 413 (456)
Q Consensus 408 VllDaP 413 (456)
|+.-+|
T Consensus 80 Vin~ag 85 (405)
T 4ina_A 80 VLNIAL 85 (405)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 988655
No 484
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=47.76 E-value=62 Score=31.00 Aligned_cols=62 Identities=18% Similarity=0.004 Sum_probs=44.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHcC-CCceEEEEe-CCHHHHHHHHHHHH-HcCCCceEEEEeccccccc
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAID-INKGRLRILNETAK-LHQVNSVIRTIHADLRTFA 398 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvD-is~~rl~~l~~n~~-r~g~~~~V~~~~~Da~~~~ 398 (456)
+..||= ..|+||.+..++..+- ....|+.++ .+++.++.+.+.+. ..+. .+.++.+|.....
T Consensus 46 ~k~~lV-TGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 46 VPVALV-TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN--SAITVQADLSNVA 110 (328)
T ss_dssp CCEEEE-TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT--CEEEEECCCSSSC
T ss_pred CCEEEE-ECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCC--eEEEEEeeCCCch
Confidence 556664 4456788888887653 345899999 99998888877765 4453 3778888886543
No 485
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=47.68 E-value=23 Score=34.37 Aligned_cols=52 Identities=15% Similarity=0.207 Sum_probs=37.5
Q ss_pred hcCCCCCCeEEEEcC-C-CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 328 VVDPQPGQSIVDCCA-A-PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 328 ~l~~~~g~~VLDlcA-G-pGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
...+++|++||-.|+ | .|..+++++... ..+|+++|.++++++.+++ +|.+.
T Consensus 162 ~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~ 215 (353)
T 4dup_A 162 MAGLTEGESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACER----LGAKR 215 (353)
T ss_dssp TTCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSE
T ss_pred hcCCCCCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCE
Confidence 356789999998743 2 355566677664 3589999999999987764 57653
No 486
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=47.68 E-value=28 Score=33.16 Aligned_cols=51 Identities=10% Similarity=-0.029 Sum_probs=36.1
Q ss_pred hcCCCCCCeEEEEcC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012783 328 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (456)
Q Consensus 328 ~l~~~~g~~VLDlcA--GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~ 384 (456)
..++++|++||-.|+ |.|..+++++... ..+|+++|.++++++.+++ +|.+
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~----~g~~ 187 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALK----AGAW 187 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCS
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCC
Confidence 456789999999884 3344455555554 3589999999999887754 4654
No 487
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=47.54 E-value=24 Score=34.51 Aligned_cols=47 Identities=9% Similarity=-0.025 Sum_probs=35.5
Q ss_pred CCCCeEEEEcCC--CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 332 QPGQSIVDCCAA--PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 332 ~~g~~VLDlcAG--pGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
++|++||=.||+ .|..++++|..++ .+|+++. ++++++.+ +.+|.+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G--a~Vi~~~-~~~~~~~~----~~lGa~~ 211 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG--YIPIATC-SPHNFDLA----KSRGAEE 211 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEE-CGGGHHHH----HHTTCSE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC--CEEEEEe-CHHHHHHH----HHcCCcE
Confidence 789999999883 5777888888753 4788885 78887755 4578764
No 488
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=47.50 E-value=25 Score=34.46 Aligned_cols=48 Identities=10% Similarity=0.115 Sum_probs=34.1
Q ss_pred CCCCCeEEEEcC-C-CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 331 PQPGQSIVDCCA-A-PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 331 ~~~g~~VLDlcA-G-pGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
+++|++||=.|| | .|..++++|..++ .+|++++ ++++++.+ +.+|.+.
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~G--a~Vi~~~-~~~~~~~~----~~lGa~~ 230 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWD--AHVTAVC-SQDASELV----RKLGADD 230 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEE-CGGGHHHH----HHTTCSE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCC--CEEEEEe-ChHHHHHH----HHcCCCE
Confidence 788999999984 3 4556677777653 5899998 66766554 4578764
No 489
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=47.26 E-value=68 Score=29.33 Aligned_cols=81 Identities=14% Similarity=-0.004 Sum_probs=54.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCCC-ceEEEE-eCCHHHHHHHHHHHHHcCCCceEEEEeccccccccc---------CC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSGQ-GLVYAI-DINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~~-g~V~Av-Dis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
+.+||=.| |+||.+.++++.+-.. .+|+.+ +.+...++.+.+.++..+.. +.++.+|....... ..
T Consensus 4 ~k~vlVTG-as~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 4 NKCALVTG-SSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK--VLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCC--EEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEec-CCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc--EEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 55666555 5677888887766433 467775 89999998888888776643 78889998753210 11
Q ss_pred CCccEEEEcCCCCCC
Q 012783 403 VKCDKVLLDAPCSGL 417 (456)
Q Consensus 403 ~~fD~VllDaPCSg~ 417 (456)
+..|.++..+-....
T Consensus 81 g~id~lv~nAg~~~~ 95 (258)
T 3oid_A 81 GRLDVFVNNAASGVL 95 (258)
T ss_dssp SCCCEEEECCCCCCC
T ss_pred CCCCEEEECCCCCCC
Confidence 468999997754333
No 490
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=47.07 E-value=14 Score=35.89 Aligned_cols=55 Identities=15% Similarity=0.083 Sum_probs=35.2
Q ss_pred cCCCCC-CeEEEEcC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012783 329 VDPQPG-QSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (456)
Q Consensus 329 l~~~~g-~~VLDlcA--GpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~ 385 (456)
.++++| ++||=.|| |.|..++++|..++ .+|+++..+.+.+...++.++.+|.+.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~~~~~~~~~~~~lGa~~ 219 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLN--FNSISVIRDRPNLDEVVASLKELGATQ 219 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHT--CEEEEEECCCTTHHHHHHHHHHHTCSE
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCC--CEEEEEecCccccHHHHHHHHhcCCeE
Confidence 467899 99998876 34556777887763 467777655444322233445678764
No 491
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=46.97 E-value=83 Score=29.22 Aligned_cols=82 Identities=12% Similarity=0.050 Sum_probs=54.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcC---CCceEEEEeccccccccc--------
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQ---VNSVIRTIHADLRTFADN-------- 400 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g---~~~~V~~~~~Da~~~~~~-------- 400 (456)
.+.+||=.|+ +|+.+.+++..+- ...+|++++.+...++.+.+.++... ....+.++.+|..+....
T Consensus 17 ~~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 17 QGQVAIVTGG-ATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 3567876665 6788888877653 23589999999998888777776521 112478889998653210
Q ss_pred -CCCCccEEEEcCCCC
Q 012783 401 -STVKCDKVLLDAPCS 415 (456)
Q Consensus 401 -~~~~fD~VllDaPCS 415 (456)
..+.+|.|+..+-..
T Consensus 96 ~~~g~id~li~~Ag~~ 111 (303)
T 1yxm_A 96 DTFGKINFLVNNGGGQ 111 (303)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 013689999976533
No 492
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=46.90 E-value=46 Score=29.82 Aligned_cols=80 Identities=14% Similarity=0.047 Sum_probs=53.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHH-cCCCceEEEEeccccccccc---------CC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKL-HQVNSVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r-~g~~~~V~~~~~Da~~~~~~---------~~ 402 (456)
+.+||=.| |+|+.+.++++.+- ...+|++++.+...++.+.+.+.. .+. .+.++.+|..+.... ..
T Consensus 7 ~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (248)
T 2pnf_A 7 GKVSLVTG-STRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGV--KAHGVEMNLLSEESINKAFEEIYNLV 83 (248)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCC--CEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCC--ceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 55666544 57888888887653 345899999999988877766654 343 367888887653210 01
Q ss_pred CCccEEEEcCCCCC
Q 012783 403 VKCDKVLLDAPCSG 416 (456)
Q Consensus 403 ~~fD~VllDaPCSg 416 (456)
+.+|.|+..+-...
T Consensus 84 ~~~d~vi~~Ag~~~ 97 (248)
T 2pnf_A 84 DGIDILVNNAGITR 97 (248)
T ss_dssp SCCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 47899998665443
No 493
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=46.87 E-value=24 Score=34.00 Aligned_cols=68 Identities=16% Similarity=0.184 Sum_probs=46.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEeccccccc---ccCCCCccEEEE
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA---DNSTVKCDKVLL 410 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~---~~~~~~fD~Vll 410 (456)
..+|+=+|+ |..+..+++.+...|.|+++|.++++++ +++ .| +.++.+|+.+.. ...-...|.|++
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~----~~----~~~i~gd~~~~~~L~~a~i~~a~~vi~ 183 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKK-VLR----SG----ANFVHGDPTRVSDLEKANVRGARAVIV 183 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH----TT----CEEEESCTTSHHHHHHTCSTTEEEEEE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh----CC----cEEEEeCCCCHHHHHhcChhhccEEEE
Confidence 457777665 6777788887755555999999999988 653 23 567899987532 122357888888
Q ss_pred cC
Q 012783 411 DA 412 (456)
Q Consensus 411 Da 412 (456)
-.
T Consensus 184 ~~ 185 (336)
T 1lnq_A 184 DL 185 (336)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 494
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=46.67 E-value=33 Score=31.87 Aligned_cols=83 Identities=13% Similarity=0.015 Sum_probs=52.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHH-------HHHHHHHHHHcCCCceEEEEeccccccccc----
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGR-------LRILNETAKLHQVNSVIRTIHADLRTFADN---- 400 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~r-------l~~l~~n~~r~g~~~~V~~~~~Da~~~~~~---- 400 (456)
.|..||=.|++ ||.+..++..+- ...+|+.++.+... ++.+.+.++..+. .+.++..|.......
T Consensus 5 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~ 81 (274)
T 3e03_A 5 SGKTLFITGAS-RGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG--QGLALKCDIREEDQVRAAV 81 (274)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTS--EEEEEECCTTCHHHHHHHH
T ss_pred CCcEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCC--eEEEEeCCCCCHHHHHHHH
Confidence 35677766665 677777776553 24589999988653 5555555555554 478889998653210
Q ss_pred -----CCCCccEEEEcCCCCCCc
Q 012783 401 -----STVKCDKVLLDAPCSGLG 418 (456)
Q Consensus 401 -----~~~~fD~VllDaPCSg~G 418 (456)
..+..|.++..+--...+
T Consensus 82 ~~~~~~~g~iD~lvnnAG~~~~~ 104 (274)
T 3e03_A 82 AATVDTFGGIDILVNNASAIWLR 104 (274)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCC
T ss_pred HHHHHHcCCCCEEEECCCcccCC
Confidence 114789999977444333
No 495
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=46.63 E-value=44 Score=30.49 Aligned_cols=86 Identities=15% Similarity=0.020 Sum_probs=56.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEEeccccccccc---------CC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVN-SVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~-~~V~~~~~Da~~~~~~---------~~ 402 (456)
+.+||=.|+ +||.+..+++.+-. ..+|+.++.+.+.++.+.+.+...+-. ..+.++..|....... ..
T Consensus 7 ~k~~lVTGa-s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 7 KGLAIITGA-SQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCEEEEEST-TSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 556666665 46777777665532 458999999999999888887765321 2367888898753210 11
Q ss_pred CCccEEEEcCCCCCCccc
Q 012783 403 VKCDKVLLDAPCSGLGVL 420 (456)
Q Consensus 403 ~~fD~VllDaPCSg~G~i 420 (456)
+..|.++..+--...+.+
T Consensus 86 g~iD~lvnnAg~~~~~~~ 103 (250)
T 3nyw_A 86 GAVDILVNAAAMFMDGSL 103 (250)
T ss_dssp CCEEEEEECCCCCCCCCC
T ss_pred CCCCEEEECCCcCCCCCC
Confidence 478999987754433433
No 496
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=46.25 E-value=81 Score=28.98 Aligned_cols=83 Identities=20% Similarity=0.098 Sum_probs=56.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCC------------HHHHHHHHHHHHHcCCCceEEEEecccccccc
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDIN------------KGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis------------~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~ 399 (456)
.|.+||=.|++ ||.+.+++..+-. ..+|+.+|.+ .+.++.+...++..+. .+.++..|......
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR--KAYTAEVDVRDRAA 85 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS--CEEEEECCTTCHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC--ceEEEEccCCCHHH
Confidence 36677766654 6777777775533 4589999987 7888888777777664 37888999875321
Q ss_pred c---------CCCCccEEEEcCCCCCCc
Q 012783 400 N---------STVKCDKVLLDAPCSGLG 418 (456)
Q Consensus 400 ~---------~~~~fD~VllDaPCSg~G 418 (456)
. ..+..|.++..+-....+
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~ 113 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLG 113 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCccc
Confidence 1 014789999977554433
No 497
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=46.16 E-value=21 Score=34.80 Aligned_cols=51 Identities=8% Similarity=0.036 Sum_probs=34.8
Q ss_pred hcCCC--C-------CCeEEEEcCCC-chHHHHHHHHcCCCceEEEEeCCH---HHHHHHHHHHHHcCCC
Q 012783 328 VVDPQ--P-------GQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINK---GRLRILNETAKLHQVN 384 (456)
Q Consensus 328 ~l~~~--~-------g~~VLDlcAGp-Ggkt~~la~~~~~~g~V~AvDis~---~rl~~l~~n~~r~g~~ 384 (456)
...++ + |++||-.|+|+ |..+++++..++ .+|+++|.++ ++++.++ .+|.+
T Consensus 166 ~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~~~----~~ga~ 229 (366)
T 2cdc_A 166 QKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYG--LEVWMANRREPTEVEQTVIE----ETKTN 229 (366)
T ss_dssp GGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHT--CEEEEEESSCCCHHHHHHHH----HHTCE
T ss_pred ccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCccchHHHHHHH----HhCCc
Confidence 45677 7 99999999832 333445555542 4899999998 8876654 35654
No 498
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=45.70 E-value=53 Score=27.33 Aligned_cols=72 Identities=13% Similarity=0.120 Sum_probs=44.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCC-HHHHHHHHHHHHHcCCCceEEEEeccccccc---ccCCCCccEE
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDIN-KGRLRILNETAKLHQVNSVIRTIHADLRTFA---DNSTVKCDKV 408 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis-~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~---~~~~~~fD~V 408 (456)
..+|+=+|+ |..+..+++.+.. ...|+.+|.+ +++++.+.+... .| +.++.+|+.... ...-...|.|
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-~~----~~~i~gd~~~~~~l~~a~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-DN----ADVIPGDSNDSSVLKKAGIDRCRAI 75 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-TT----CEEEESCTTSHHHHHHHTTTTCSEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-CC----CeEEEcCCCCHHHHHHcChhhCCEE
Confidence 346765554 7777777766543 3579999997 577766654321 12 467889876432 1123578999
Q ss_pred EEcC
Q 012783 409 LLDA 412 (456)
Q Consensus 409 llDa 412 (456)
++-.
T Consensus 76 i~~~ 79 (153)
T 1id1_A 76 LALS 79 (153)
T ss_dssp EECS
T ss_pred EEec
Confidence 9844
No 499
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=45.59 E-value=97 Score=28.13 Aligned_cols=81 Identities=16% Similarity=0.089 Sum_probs=53.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEecccccccc---------cCC
Q 012783 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------NST 402 (456)
Q Consensus 333 ~g~~VLDlcAGpGgkt~~la~~~~-~~g~V~AvDis~~rl~~l~~n~~r~g~~~~V~~~~~Da~~~~~---------~~~ 402 (456)
.|.+||=.| |+|+.+.+++..+- ...+|+.+|.+.+.++.+.+.+ +- .+.++.+|...... ...
T Consensus 7 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~--~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 7 EGKSALITG-SARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GP--AAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CT--TEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC--CceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 466777666 55778888777653 3458999999998877665543 32 36788889865321 012
Q ss_pred CCccEEEEcCCCCCCcc
Q 012783 403 VKCDKVLLDAPCSGLGV 419 (456)
Q Consensus 403 ~~fD~VllDaPCSg~G~ 419 (456)
+.+|.++..+-.+..+.
T Consensus 81 g~id~lv~~Ag~~~~~~ 97 (259)
T 4e6p_A 81 GGLDILVNNAALFDLAP 97 (259)
T ss_dssp SSCCEEEECCCCCCCBC
T ss_pred CCCCEEEECCCcCCCCC
Confidence 47899999776554443
No 500
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=45.48 E-value=51 Score=30.48 Aligned_cols=81 Identities=15% Similarity=0.091 Sum_probs=54.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEEeccccccccc---------CC
Q 012783 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVN-SVIRTIHADLRTFADN---------ST 402 (456)
Q Consensus 334 g~~VLDlcAGpGgkt~~la~~~~~-~g~V~AvDis~~rl~~l~~n~~r~g~~-~~V~~~~~Da~~~~~~---------~~ 402 (456)
+.+||=.| |+|+.+..++..+-. ..+|++++.+++.++.+.+.+...+.. ..+.++.+|..+.... ..
T Consensus 6 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (280)
T 1xkq_A 6 NKTVIITG-SSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84 (280)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 55666555 567788877776533 458999999999888877777655431 1378888998753210 01
Q ss_pred CCccEEEEcCCCC
Q 012783 403 VKCDKVLLDAPCS 415 (456)
Q Consensus 403 ~~fD~VllDaPCS 415 (456)
+.+|.++..+-..
T Consensus 85 g~iD~lv~nAg~~ 97 (280)
T 1xkq_A 85 GKIDVLVNNAGAA 97 (280)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689999977543
Done!