Query 012785
Match_columns 456
No_of_seqs 358 out of 2444
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 06:17:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012785.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012785hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF04864 Alliinase_C: Allinase 100.0 6.1E-58 1.3E-62 425.3 22.8 357 97-455 1-363 (363)
2 COG0436 Aspartate/tyrosine/aro 100.0 4.7E-52 1E-56 414.0 34.8 328 94-456 28-390 (393)
3 COG1167 ARO8 Transcriptional r 100.0 2E-46 4.3E-51 381.6 35.3 326 94-455 89-453 (459)
4 PRK09147 succinyldiaminopimela 100.0 2.3E-46 5.1E-51 377.5 34.9 324 91-456 26-395 (396)
5 PRK15481 transcriptional regul 100.0 1.8E-46 3.9E-51 382.1 34.0 321 94-456 85-430 (431)
6 PRK07366 succinyldiaminopimela 100.0 2.8E-46 6E-51 376.0 34.7 327 91-455 27-388 (388)
7 PLN00175 aminotransferase fami 100.0 5.6E-46 1.2E-50 375.6 35.9 325 93-456 53-412 (413)
8 PRK08636 aspartate aminotransf 100.0 1.8E-45 3.9E-50 371.6 36.5 327 92-456 31-399 (403)
9 PRK07681 aspartate aminotransf 100.0 2.3E-45 4.9E-50 370.6 35.7 323 92-453 30-384 (399)
10 PRK06207 aspartate aminotransf 100.0 1.9E-45 4E-50 371.3 34.6 326 92-455 37-400 (405)
11 PRK06348 aspartate aminotransf 100.0 1.9E-45 4E-50 369.3 34.1 322 94-454 29-382 (384)
12 PLN02187 rooty/superroot1 100.0 4E-45 8.6E-50 373.3 35.9 328 91-455 63-436 (462)
13 TIGR03538 DapC_gpp succinyldia 100.0 3.5E-45 7.6E-50 368.5 34.7 322 92-455 26-393 (393)
14 PRK09148 aminotransferase; Val 100.0 5.2E-45 1.1E-49 368.2 35.6 326 92-455 28-388 (405)
15 PRK05839 hypothetical protein; 100.0 2.8E-45 6E-50 366.5 32.7 317 93-456 23-373 (374)
16 PLN00143 tyrosine/nicotianamin 100.0 8E-45 1.7E-49 367.1 34.5 328 90-455 28-402 (409)
17 TIGR03540 DapC_direct LL-diami 100.0 1.5E-44 3.2E-49 362.9 36.1 326 91-454 26-383 (383)
18 PRK07590 L,L-diaminopimelate a 100.0 7.3E-45 1.6E-49 367.9 33.6 326 93-455 33-409 (409)
19 PLN00145 tyrosine/nicotianamin 100.0 1.4E-44 3E-49 366.9 34.7 325 93-455 51-422 (430)
20 PRK08068 transaminase; Reviewe 100.0 1.9E-44 4.2E-49 362.7 35.5 325 92-454 30-386 (389)
21 PRK06855 aminotransferase; Val 100.0 9.9E-45 2.1E-49 368.7 33.5 328 91-455 29-427 (433)
22 PRK09276 LL-diaminopimelate am 100.0 2.3E-44 5E-49 361.8 35.5 325 92-454 29-385 (385)
23 PLN02656 tyrosine transaminase 100.0 2.3E-44 4.9E-49 364.0 35.2 328 90-455 27-401 (409)
24 KOG0259 Tyrosine aminotransfer 100.0 9.5E-45 2E-49 338.0 29.0 359 37-455 27-431 (447)
25 PRK12414 putative aminotransfe 100.0 3.2E-44 7E-49 360.2 34.5 323 92-454 27-384 (384)
26 PRK08960 hypothetical protein; 100.0 5E-44 1.1E-48 359.4 35.2 328 91-456 29-386 (387)
27 PRK05942 aspartate aminotransf 100.0 4.5E-44 9.7E-49 360.5 34.6 326 91-454 32-389 (394)
28 PTZ00377 alanine aminotransfer 100.0 1.7E-44 3.8E-49 371.7 32.0 301 129-455 109-473 (481)
29 PRK07324 transaminase; Validat 100.0 1E-44 2.3E-49 362.1 29.1 320 91-455 23-368 (373)
30 PRK07865 N-succinyldiaminopime 100.0 6.5E-44 1.4E-48 355.7 34.5 317 92-452 25-363 (364)
31 PRK07682 hypothetical protein; 100.0 3.5E-44 7.5E-49 359.6 32.1 324 94-456 20-375 (378)
32 PLN02450 1-aminocyclopropane-1 100.0 6.8E-44 1.5E-48 364.8 33.8 331 91-455 35-428 (468)
33 TIGR03537 DapC succinyldiamino 100.0 1.5E-43 3.3E-48 351.1 34.5 318 96-454 2-350 (350)
34 PRK06290 aspartate aminotransf 100.0 1.4E-43 3E-48 357.4 34.6 321 92-455 42-403 (410)
35 TIGR03539 DapC_actino succinyl 100.0 7.4E-44 1.6E-48 354.3 31.9 318 91-452 18-357 (357)
36 PRK13355 bifunctional HTH-doma 100.0 8.3E-44 1.8E-48 369.6 33.2 328 91-455 143-512 (517)
37 PRK07683 aminotransferase A; V 100.0 2.7E-43 5.7E-48 353.9 35.4 323 93-455 27-381 (387)
38 PTZ00433 tyrosine aminotransfe 100.0 2.4E-43 5.2E-48 357.0 34.8 327 91-455 30-406 (412)
39 KOG0257 Kynurenine aminotransf 100.0 6.7E-45 1.5E-49 345.1 21.4 325 99-453 36-415 (420)
40 PRK06108 aspartate aminotransf 100.0 3.8E-43 8.3E-48 352.7 34.7 324 94-456 24-381 (382)
41 PLN02376 1-aminocyclopropane-1 100.0 3.7E-43 8.1E-48 360.6 35.0 331 91-455 43-436 (496)
42 PRK08175 aminotransferase; Val 100.0 3.9E-43 8.5E-48 353.8 33.9 327 91-455 26-387 (395)
43 PRK06107 aspartate aminotransf 100.0 6.2E-43 1.4E-47 353.0 35.3 324 92-455 31-398 (402)
44 PRK07337 aminotransferase; Val 100.0 5.1E-43 1.1E-47 352.3 34.2 326 92-455 28-387 (388)
45 TIGR01264 tyr_amTase_E tyrosin 100.0 4.3E-43 9.3E-48 354.3 33.6 327 92-456 29-398 (401)
46 PRK08912 hypothetical protein; 100.0 7.4E-43 1.6E-47 351.0 34.6 325 93-456 25-385 (387)
47 PRK07309 aromatic amino acid a 100.0 1.3E-42 2.8E-47 349.5 35.6 323 94-455 30-386 (391)
48 PRK08363 alanine aminotransfer 100.0 1.2E-42 2.7E-47 350.6 35.2 327 91-455 27-392 (398)
49 PRK09082 methionine aminotrans 100.0 6.8E-43 1.5E-47 351.0 32.3 323 93-454 29-386 (386)
50 TIGR03542 DAPAT_plant LL-diami 100.0 1.1E-42 2.4E-47 351.2 32.6 325 92-455 31-402 (402)
51 PRK09275 aspartate aminotransf 100.0 3E-43 6.6E-48 358.5 28.0 399 6-456 10-516 (527)
52 PRK08361 aspartate aminotransf 100.0 1.6E-42 3.4E-47 349.1 32.1 327 93-456 32-389 (391)
53 PLN02607 1-aminocyclopropane-1 100.0 9.7E-43 2.1E-47 353.7 30.5 332 90-455 43-435 (447)
54 PRK05957 aspartate aminotransf 100.0 5.5E-42 1.2E-46 344.6 35.5 325 94-455 27-383 (389)
55 PRK07568 aspartate aminotransf 100.0 7.7E-42 1.7E-46 345.0 35.3 323 93-455 29-390 (397)
56 PRK09440 avtA valine--pyruvate 100.0 2.9E-42 6.2E-47 350.0 31.7 327 94-455 30-409 (416)
57 PLN02231 alanine transaminase 100.0 3.2E-42 6.9E-47 355.7 31.9 332 93-455 128-525 (534)
58 PRK07550 hypothetical protein; 100.0 1.4E-41 3E-46 341.7 34.5 325 91-454 26-384 (386)
59 PRK07777 aminotransferase; Val 100.0 1.4E-41 2.9E-46 341.8 34.3 323 94-455 24-384 (387)
60 PRK09265 aminotransferase AlaT 100.0 2E-41 4.4E-46 342.3 34.7 327 91-455 30-399 (404)
61 PRK14809 histidinol-phosphate 100.0 5.7E-42 1.2E-46 340.9 30.1 308 92-456 28-356 (357)
62 PRK06358 threonine-phosphate d 100.0 5.5E-42 1.2E-46 340.2 29.8 310 94-456 19-354 (354)
63 PRK01533 histidinol-phosphate 100.0 1.4E-42 2.9E-47 345.5 24.7 305 92-456 27-354 (366)
64 PRK07392 threonine-phosphate d 100.0 7.4E-42 1.6E-46 340.4 30.0 308 94-454 22-356 (360)
65 COG0079 HisC Histidinol-phosph 100.0 5.1E-42 1.1E-46 336.2 28.1 312 95-456 23-353 (356)
66 TIGR01265 tyr_nico_aTase tyros 100.0 4.8E-41 1E-45 339.4 34.6 326 92-455 29-399 (403)
67 PRK06425 histidinol-phosphate 100.0 1.7E-41 3.8E-46 333.8 30.3 295 95-455 17-331 (332)
68 PRK05764 aspartate aminotransf 100.0 9.4E-41 2E-45 336.6 34.3 325 92-456 29-390 (393)
69 PRK08056 threonine-phosphate d 100.0 2E-41 4.3E-46 336.7 28.6 313 92-456 18-354 (356)
70 TIGR03801 asp_4_decarbox aspar 100.0 1.2E-41 2.7E-46 346.3 27.3 400 6-455 2-514 (521)
71 PRK07908 hypothetical protein; 100.0 8.1E-41 1.7E-45 331.6 31.4 312 91-455 19-345 (349)
72 PRK09257 aromatic amino acid a 100.0 6.8E-41 1.5E-45 337.6 30.1 321 94-455 26-396 (396)
73 PRK14808 histidinol-phosphate 100.0 8.7E-41 1.9E-45 328.9 28.8 305 92-454 17-334 (335)
74 PRK02610 histidinol-phosphate 100.0 1.5E-40 3.3E-45 332.5 30.6 315 94-456 28-370 (374)
75 PLN03026 histidinol-phosphate 100.0 2.1E-40 4.6E-45 331.7 30.5 308 93-454 51-379 (380)
76 PRK03158 histidinol-phosphate 100.0 7.4E-41 1.6E-45 333.2 27.1 309 94-455 29-359 (359)
77 PRK04781 histidinol-phosphate 100.0 3.2E-40 7E-45 328.6 30.1 305 95-455 32-361 (364)
78 PRK14807 histidinol-phosphate 100.0 4E-40 8.8E-45 326.7 30.5 310 95-455 23-350 (351)
79 PRK05166 histidinol-phosphate 100.0 1.8E-40 4E-45 331.6 28.1 312 92-455 34-369 (371)
80 COG1168 MalY Bifunctional PLP- 100.0 8.3E-40 1.8E-44 307.5 30.5 323 94-456 25-385 (388)
81 PRK05387 histidinol-phosphate 100.0 1.9E-40 4.2E-45 329.6 27.9 311 94-455 24-351 (353)
82 PTZ00376 aspartate aminotransf 100.0 2E-40 4.3E-45 334.9 27.7 322 94-455 29-401 (404)
83 PRK06836 aspartate aminotransf 100.0 1.7E-39 3.6E-44 327.2 33.4 321 93-456 32-390 (394)
84 PRK04870 histidinol-phosphate 100.0 4.3E-40 9.3E-45 327.4 28.5 312 94-455 26-356 (356)
85 PRK08153 histidinol-phosphate 100.0 7.4E-40 1.6E-44 326.8 29.3 307 95-455 33-363 (369)
86 PRK06959 putative threonine-ph 100.0 1.3E-39 2.8E-44 320.9 28.6 297 94-455 24-331 (339)
87 PRK09105 putative aminotransfe 100.0 1.4E-39 3E-44 324.5 28.6 308 94-456 43-369 (370)
88 PRK01688 histidinol-phosphate 100.0 3.6E-40 7.9E-45 326.8 24.1 303 95-452 29-351 (351)
89 PLN02672 methionine S-methyltr 100.0 3.8E-39 8.3E-44 346.7 33.0 326 92-456 695-1079(1082)
90 PRK05664 threonine-phosphate d 100.0 4E-39 8.6E-44 316.7 30.4 293 95-455 21-326 (330)
91 PRK06225 aspartate aminotransf 100.0 7.1E-39 1.5E-43 321.3 32.1 319 93-455 27-374 (380)
92 PF00155 Aminotran_1_2: Aminot 100.0 1.5E-39 3.3E-44 324.3 26.8 320 95-451 2-363 (363)
93 PRK03317 histidinol-phosphate 100.0 3.8E-39 8.3E-44 321.9 29.0 315 95-456 27-363 (368)
94 PRK04635 histidinol-phosphate 100.0 3.2E-39 6.9E-44 320.6 27.0 305 94-455 31-353 (354)
95 PRK02731 histidinol-phosphate 100.0 1.3E-38 2.9E-43 318.0 29.1 312 92-456 30-365 (367)
96 PRK00950 histidinol-phosphate 100.0 4.9E-39 1.1E-43 320.5 25.3 309 93-456 33-361 (361)
97 PLN02397 aspartate transaminas 100.0 2.2E-38 4.7E-43 321.1 30.1 325 92-456 46-420 (423)
98 PRK08354 putative aminotransfe 100.0 5.7E-38 1.2E-42 306.0 29.6 294 93-455 7-310 (311)
99 PRK03967 histidinol-phosphate 100.0 1.6E-38 3.5E-43 313.3 26.0 299 94-455 18-332 (337)
100 PLN02368 alanine transaminase 100.0 1.1E-38 2.3E-43 320.1 25.1 257 128-409 100-402 (407)
101 PRK08637 hypothetical protein; 100.0 6.3E-38 1.4E-42 315.1 29.7 292 128-455 37-384 (388)
102 TIGR01140 L_thr_O3P_dcar L-thr 100.0 4.1E-38 9E-43 309.6 26.4 301 92-452 15-330 (330)
103 TIGR01141 hisC histidinol-phos 100.0 1.2E-37 2.5E-42 308.7 27.0 309 93-452 18-346 (346)
104 PRK03321 putative aminotransfe 100.0 5.8E-37 1.3E-41 304.4 24.9 306 94-456 22-350 (352)
105 KOG0256 1-aminocyclopropane-1- 100.0 2.7E-36 5.9E-41 284.0 25.9 332 92-456 71-460 (471)
106 KOG0634 Aromatic amino acid am 100.0 8.1E-36 1.8E-40 283.0 27.0 298 128-455 93-464 (472)
107 COG3977 Alanine-alpha-ketoisov 100.0 7.3E-32 1.6E-36 244.3 26.6 333 91-455 27-409 (417)
108 cd00609 AAT_like Aspartate ami 100.0 3.9E-30 8.4E-35 254.5 33.6 321 97-453 1-350 (350)
109 TIGR03576 pyridox_MJ0158 pyrid 100.0 4.6E-29 9.9E-34 245.6 29.7 270 142-456 56-346 (346)
110 PRK13238 tnaA tryptophanase/L- 100.0 7.2E-29 1.6E-33 252.2 24.0 316 90-455 32-431 (460)
111 KOG0633 Histidinol phosphate a 100.0 2E-28 4.3E-33 218.0 20.4 312 91-455 38-375 (375)
112 TIGR00858 bioF 8-amino-7-oxono 100.0 1.4E-26 3E-31 230.5 29.5 317 91-452 13-360 (360)
113 PRK06939 2-amino-3-ketobutyrat 100.0 6.1E-26 1.3E-30 229.0 30.0 318 92-455 40-391 (397)
114 PRK07049 methionine gamma-lyas 100.0 6.5E-26 1.4E-30 229.1 29.9 289 129-455 78-424 (427)
115 TIGR01822 2am3keto_CoA 2-amino 100.0 5.4E-26 1.2E-30 229.2 29.0 316 92-455 36-387 (393)
116 COG1448 TyrB Aspartate/tyrosin 99.9 6.8E-27 1.5E-31 220.6 19.0 325 92-455 24-396 (396)
117 KOG0258 Alanine aminotransfera 99.9 1.7E-26 3.7E-31 216.4 21.5 300 127-454 105-466 (475)
118 TIGR01825 gly_Cac_T_rel pyrido 99.9 2.8E-25 6.2E-30 223.3 31.5 318 92-455 31-379 (385)
119 PLN02822 serine palmitoyltrans 99.9 1.5E-25 3.2E-30 229.8 27.6 317 92-455 107-475 (481)
120 PRK02627 acetylornithine amino 99.9 4E-26 8.6E-31 230.4 22.0 279 143-455 80-392 (396)
121 PRK01278 argD acetylornithine 99.9 9.2E-26 2E-30 227.1 24.0 264 163-456 88-387 (389)
122 TIGR03392 FeS_syn_CsdA cystein 99.9 3.5E-25 7.7E-30 223.6 26.4 278 143-455 63-393 (398)
123 PRK10874 cysteine sulfinate de 99.9 8.1E-25 1.8E-29 221.1 28.0 279 142-455 65-396 (401)
124 PRK03244 argD acetylornithine 99.9 1.4E-25 3.1E-30 226.4 21.2 269 143-455 88-392 (398)
125 PRK10534 L-threonine aldolase; 99.9 3.6E-25 7.7E-30 218.2 23.2 293 96-456 1-332 (333)
126 PRK05958 8-amino-7-oxononanoat 99.9 2.1E-24 4.5E-29 216.9 29.2 319 92-455 37-385 (385)
127 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 5.7E-25 1.2E-29 219.6 24.6 271 142-456 53-367 (370)
128 PLN02721 threonine aldolase 99.9 1.1E-24 2.3E-29 216.5 25.9 305 95-456 6-351 (353)
129 TIGR00707 argD acetylornithine 99.9 7E-25 1.5E-29 220.0 24.3 268 142-455 71-379 (379)
130 PRK04073 rocD ornithine--oxo-a 99.9 7E-25 1.5E-29 221.0 23.7 269 143-456 85-396 (396)
131 cd00617 Tnase_like Tryptophana 99.9 1.6E-24 3.5E-29 217.5 23.5 316 90-455 7-406 (431)
132 PLN02483 serine palmitoyltrans 99.9 6.8E-24 1.5E-28 218.0 27.9 283 131-455 142-464 (489)
133 PRK08247 cystathionine gamma-s 99.9 2E-23 4.2E-28 207.9 27.9 275 128-455 46-362 (366)
134 PRK13392 5-aminolevulinate syn 99.9 1.3E-23 2.9E-28 212.8 26.0 271 142-455 93-395 (410)
135 PRK06460 hypothetical protein; 99.9 2.4E-23 5.1E-28 207.7 27.0 204 142-374 47-264 (376)
136 COG4992 ArgD Ornithine/acetylo 99.9 5.6E-24 1.2E-28 204.4 19.5 313 90-455 47-396 (404)
137 PRK09295 bifunctional cysteine 99.9 5.3E-23 1.1E-27 208.2 26.7 278 143-455 70-402 (406)
138 TIGR01979 sufS cysteine desulf 99.9 6.4E-23 1.4E-27 207.5 27.0 280 143-455 65-399 (403)
139 PLN02242 methionine gamma-lyas 99.9 4.8E-23 1E-27 207.5 25.3 207 142-377 78-302 (418)
140 cd06502 TA_like Low-specificit 99.9 5.9E-23 1.3E-27 202.7 25.2 264 142-454 34-338 (338)
141 PRK07582 cystathionine gamma-l 99.9 2.1E-22 4.5E-27 200.3 28.7 287 128-454 45-362 (366)
142 PRK08045 cystathionine gamma-s 99.9 2.4E-22 5.2E-27 200.7 29.1 213 128-375 46-273 (386)
143 PRK02936 argD acetylornithine 99.9 5.3E-23 1.1E-27 206.2 24.5 271 142-455 69-377 (377)
144 TIGR02080 O_succ_thio_ly O-suc 99.9 2.2E-22 4.8E-27 200.8 28.7 213 128-375 45-272 (382)
145 cd06451 AGAT_like Alanine-glyo 99.9 2.9E-22 6.2E-27 199.3 29.3 280 143-456 35-356 (356)
146 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 1.2E-22 2.7E-27 202.3 26.7 272 143-456 47-361 (361)
147 cd06454 KBL_like KBL_like; thi 99.9 2.1E-22 4.5E-27 199.7 27.5 271 142-454 48-348 (349)
148 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 3.6E-22 7.9E-27 198.4 29.0 280 142-455 33-355 (355)
149 PRK05093 argD bifunctional N-s 99.9 6E-23 1.3E-27 207.4 23.3 255 164-455 98-398 (403)
150 PRK08776 cystathionine gamma-s 99.9 3.6E-22 7.8E-27 200.5 28.6 247 143-418 63-328 (405)
151 PRK06234 methionine gamma-lyas 99.9 2.8E-22 6.1E-27 201.6 27.7 276 129-439 59-381 (400)
152 PRK02948 cysteine desulfurase; 99.9 6.9E-23 1.5E-27 205.7 23.2 278 143-455 46-372 (381)
153 PRK07179 hypothetical protein; 99.9 5.5E-22 1.2E-26 200.8 28.2 268 142-456 101-397 (407)
154 PF12897 Aminotran_MocR: Alani 99.9 5.9E-22 1.3E-26 187.6 26.3 293 129-454 62-412 (425)
155 cd00378 SHMT Serine-glycine hy 99.9 1.1E-21 2.3E-26 198.5 29.8 278 143-455 64-383 (402)
156 PRK08133 O-succinylhomoserine 99.9 7.9E-22 1.7E-26 197.7 28.4 282 142-456 63-389 (390)
157 PLN02855 Bifunctional selenocy 99.9 2.9E-22 6.3E-27 203.9 25.5 283 143-455 79-416 (424)
158 PRK04260 acetylornithine amino 99.9 3.5E-22 7.6E-27 200.0 25.3 272 143-455 69-375 (375)
159 PLN00144 acetylornithine trans 99.9 2E-22 4.2E-27 201.6 23.2 262 163-456 72-379 (382)
160 cd06453 SufS_like Cysteine des 99.9 3.2E-22 6.9E-27 200.3 24.5 275 143-451 46-373 (373)
161 PRK12381 bifunctional succinyl 99.9 1.6E-22 3.5E-27 204.3 22.4 266 143-455 84-397 (406)
162 cd00610 OAT_like Acetyl ornith 99.9 3.9E-22 8.5E-27 202.4 25.1 269 143-455 82-413 (413)
163 TIGR00713 hemL glutamate-1-sem 99.9 2E-22 4.4E-27 204.9 22.0 273 142-456 90-421 (423)
164 PRK08249 cystathionine gamma-s 99.9 1.4E-21 3.1E-26 196.0 27.3 204 142-375 66-284 (398)
165 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.2E-21 2.5E-26 197.9 26.4 285 143-451 63-397 (397)
166 PRK08861 cystathionine gamma-s 99.9 2.6E-21 5.7E-26 192.7 27.9 253 129-416 48-319 (388)
167 cd00614 CGS_like CGS_like: Cys 99.9 2.2E-21 4.8E-26 193.5 27.1 284 142-456 42-369 (369)
168 PRK08088 4-aminobutyrate amino 99.9 1.4E-21 3E-26 198.5 25.5 275 147-455 87-421 (425)
169 TIGR03403 nifS_epsilon cystein 99.9 1.2E-21 2.7E-26 196.7 24.7 283 142-455 41-373 (382)
170 PRK13479 2-aminoethylphosphona 99.9 4.7E-21 1E-25 191.5 28.4 282 142-455 39-361 (368)
171 TIGR02326 transamin_PhnW 2-ami 99.9 6.5E-21 1.4E-25 190.1 29.2 281 142-456 37-361 (363)
172 TIGR01821 5aminolev_synth 5-am 99.9 3.4E-21 7.3E-26 194.8 27.0 271 142-455 92-394 (402)
173 PRK07503 methionine gamma-lyas 99.9 2.4E-21 5.1E-26 194.9 25.5 207 142-377 67-289 (403)
174 PRK06767 methionine gamma-lyas 99.9 3.9E-21 8.5E-26 192.6 26.6 286 129-455 56-383 (386)
175 cd00613 GDC-P Glycine cleavage 99.9 4.2E-21 9.1E-26 193.9 27.0 313 93-451 19-398 (398)
176 PRK07504 O-succinylhomoserine 99.9 5.2E-21 1.1E-25 192.1 27.4 256 129-418 60-333 (398)
177 PRK09064 5-aminolevulinate syn 99.9 4.4E-21 9.4E-26 194.3 27.0 271 142-455 93-395 (407)
178 PRK00854 rocD ornithine--oxo-a 99.9 2.8E-21 6.1E-26 195.3 24.2 268 143-456 86-400 (401)
179 PRK07811 cystathionine gamma-s 99.9 1.1E-20 2.3E-25 189.3 28.1 282 142-455 63-386 (388)
180 PRK08574 cystathionine gamma-s 99.9 1.7E-20 3.7E-25 187.5 28.4 205 142-375 55-273 (385)
181 TIGR01328 met_gam_lyase methio 99.9 1.2E-20 2.7E-25 189.0 26.0 289 129-455 54-388 (391)
182 TIGR00700 GABAtrnsam 4-aminobu 99.9 8.6E-21 1.9E-25 192.4 25.0 262 164-456 95-419 (420)
183 PRK00451 glycine dehydrogenase 99.9 9.6E-21 2.1E-25 194.1 25.4 319 95-456 69-447 (447)
184 TIGR03402 FeS_nifS cysteine de 99.9 5.9E-21 1.3E-25 191.5 23.3 277 143-455 45-370 (379)
185 PRK07810 O-succinylhomoserine 99.9 1.7E-20 3.7E-25 188.4 26.2 290 129-455 65-402 (403)
186 PRK04612 argD acetylornithine 99.9 6.3E-21 1.4E-25 191.9 23.1 257 164-455 99-401 (408)
187 TIGR01325 O_suc_HS_sulf O-succ 99.9 6.1E-20 1.3E-24 183.6 29.7 288 129-455 49-380 (380)
188 PRK07050 cystathionine beta-ly 99.9 4.4E-20 9.6E-25 185.1 27.7 212 129-375 60-286 (394)
189 PTZ00125 ornithine aminotransf 99.9 1E-20 2.2E-25 191.2 23.0 252 164-455 89-393 (400)
190 PRK06918 4-aminobutyrate amino 99.9 1.5E-20 3.3E-25 192.1 23.0 261 164-455 116-441 (451)
191 TIGR03246 arg_catab_astC succi 99.9 2.2E-20 4.8E-25 188.2 23.1 268 143-455 80-393 (397)
192 PLN03227 serine palmitoyltrans 99.9 1.4E-19 3E-24 181.7 28.5 289 130-455 38-380 (392)
193 PRK13393 5-aminolevulinate syn 99.9 2.3E-19 5E-24 181.5 29.4 271 142-455 92-394 (406)
194 TIGR01977 am_tr_V_EF2568 cyste 99.9 5.4E-20 1.2E-24 184.4 24.2 282 142-453 46-375 (376)
195 PRK07505 hypothetical protein; 99.9 2.1E-19 4.5E-24 181.7 28.4 271 143-456 94-398 (402)
196 PRK08064 cystathionine beta-ly 99.9 1.9E-19 4.1E-24 180.5 27.8 282 142-454 56-383 (390)
197 PRK07269 cystathionine gamma-s 99.9 3.3E-19 7.2E-24 176.8 28.1 276 129-456 49-363 (364)
198 PRK09792 4-aminobutyrate trans 99.9 1.5E-19 3.2E-24 183.1 25.6 259 164-456 102-420 (421)
199 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 2.2E-19 4.8E-24 181.7 26.8 154 129-301 52-218 (418)
200 PLN02624 ornithine-delta-amino 99.9 1.1E-19 2.3E-24 186.5 23.8 272 143-455 120-442 (474)
201 PRK06777 4-aminobutyrate amino 99.8 1.5E-19 3.2E-24 183.1 23.7 257 164-456 102-420 (421)
202 TIGR03812 tyr_de_CO2_Arch tyro 99.8 3E-19 6.6E-24 178.7 24.9 273 142-454 61-373 (373)
203 cd06450 DOPA_deC_like DOPA dec 99.8 4.6E-20 1E-24 182.6 18.8 268 130-454 29-345 (345)
204 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 4.6E-19 9.9E-24 178.2 26.0 272 142-455 65-379 (387)
205 PRK07671 cystathionine beta-ly 99.8 8.3E-19 1.8E-23 175.0 27.4 283 142-456 52-377 (377)
206 PLN02409 serine--glyoxylate am 99.8 1E-18 2.3E-23 176.2 28.5 283 143-455 41-370 (401)
207 COG0520 csdA Selenocysteine ly 99.8 1.3E-18 2.8E-23 173.7 28.6 281 142-455 68-403 (405)
208 PRK09028 cystathionine beta-ly 99.8 1.6E-18 3.5E-23 172.6 28.8 203 143-375 64-281 (394)
209 PRK08360 4-aminobutyrate amino 99.8 3.3E-19 7.2E-24 181.2 23.7 257 164-455 102-424 (443)
210 TIGR01437 selA_rel uncharacter 99.8 4.9E-19 1.1E-23 176.0 24.3 283 143-455 44-363 (363)
211 PRK00011 glyA serine hydroxyme 99.8 2.7E-18 5.8E-23 174.5 30.1 262 163-455 88-387 (416)
212 PRK05968 hypothetical protein; 99.8 1.5E-18 3.2E-23 174.1 26.7 267 142-439 65-370 (389)
213 PRK13520 L-tyrosine decarboxyl 99.8 7.7E-19 1.7E-23 175.7 24.7 273 143-456 62-370 (371)
214 TIGR01329 cysta_beta_ly_E cyst 99.8 1.6E-18 3.5E-23 173.1 26.7 281 143-455 50-373 (378)
215 PRK08248 O-acetylhomoserine am 99.8 1.6E-18 3.5E-23 175.3 27.0 206 142-375 66-317 (431)
216 PRK14012 cysteine desulfurase; 99.8 4.8E-19 1E-23 179.1 23.2 277 143-455 52-377 (404)
217 PRK06702 O-acetylhomoserine am 99.8 1.8E-18 3.9E-23 173.7 25.2 284 142-455 63-422 (432)
218 TIGR02006 IscS cysteine desulf 99.8 9.8E-19 2.1E-23 176.7 23.3 277 143-455 50-375 (402)
219 TIGR01885 Orn_aminotrans ornit 99.8 1.2E-18 2.7E-23 175.9 23.8 270 143-456 82-401 (401)
220 TIGR01324 cysta_beta_ly_B cyst 99.8 9.5E-18 2.1E-22 167.0 29.2 202 143-374 53-269 (377)
221 PRK07495 4-aminobutyrate amino 99.8 2E-18 4.2E-23 174.8 24.4 260 164-455 102-419 (425)
222 PRK06084 O-acetylhomoserine am 99.8 6.4E-18 1.4E-22 170.8 27.6 206 142-375 60-312 (425)
223 PRK05939 hypothetical protein; 99.8 1.4E-17 3E-22 167.0 28.9 280 143-455 50-394 (397)
224 TIGR02379 ECA_wecE TDP-4-keto- 99.8 2E-17 4.2E-22 165.1 28.8 263 163-456 46-376 (376)
225 PRK06176 cystathionine gamma-s 99.8 7E-18 1.5E-22 168.4 25.4 205 142-375 52-270 (380)
226 PRK08117 4-aminobutyrate amino 99.8 3.9E-18 8.4E-23 173.8 22.1 272 143-455 89-427 (433)
227 PRK06058 4-aminobutyrate amino 99.8 6.2E-18 1.3E-22 172.4 23.5 254 164-456 118-441 (443)
228 PRK00062 glutamate-1-semialdeh 99.8 2.7E-18 5.8E-23 174.4 19.8 270 143-455 93-422 (426)
229 PLN02509 cystathionine beta-ly 99.8 6E-17 1.3E-21 164.2 29.2 206 145-375 134-353 (464)
230 TIGR03235 DNA_S_dndA cysteine 99.8 2.1E-18 4.5E-23 171.5 17.8 267 143-446 45-347 (353)
231 PRK11658 UDP-4-amino-4-deoxy-L 99.8 5.1E-17 1.1E-21 162.7 26.8 275 142-455 35-377 (379)
232 PRK05967 cystathionine beta-ly 99.8 9.4E-17 2E-21 159.7 27.8 202 144-375 68-284 (395)
233 COG0160 GabT 4-aminobutyrate a 99.8 2.4E-17 5.1E-22 163.5 22.9 317 90-455 61-443 (447)
234 TIGR02407 ectoine_ectB diamino 99.8 2.7E-17 5.9E-22 166.1 23.0 259 165-456 100-411 (412)
235 PLN02651 cysteine desulfurase 99.8 3.5E-17 7.5E-22 163.3 20.7 269 143-445 46-364 (364)
236 PRK05994 O-acetylhomoserine am 99.8 4.7E-16 1E-20 157.6 28.7 207 142-376 65-317 (427)
237 TIGR03372 putres_am_tran putre 99.8 5.9E-17 1.3E-21 164.0 22.0 258 164-455 135-442 (442)
238 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 6.7E-16 1.5E-20 154.5 28.9 264 164-456 47-375 (375)
239 TIGR00709 dat 2,4-diaminobutyr 99.7 2.7E-16 5.8E-21 160.3 24.3 253 165-455 104-433 (442)
240 PRK09264 diaminobutyrate--2-ox 99.7 1.8E-16 4E-21 160.8 23.0 256 165-455 104-414 (425)
241 PRK05964 adenosylmethionine--8 99.7 1.6E-16 3.5E-21 161.4 22.3 256 164-456 103-421 (423)
242 PRK08593 4-aminobutyrate amino 99.7 1.8E-16 3.9E-21 161.4 22.1 257 164-455 104-427 (445)
243 cd00616 AHBA_syn 3-amino-5-hyd 99.7 1.8E-15 3.9E-20 150.1 28.2 271 142-452 20-352 (352)
244 COG0156 BioF 7-keto-8-aminopel 99.7 7.9E-16 1.7E-20 151.1 25.0 270 142-454 86-387 (388)
245 PRK11522 putrescine--2-oxoglut 99.7 2.8E-16 6.1E-21 160.1 22.6 254 164-455 142-449 (459)
246 PLN02955 8-amino-7-oxononanoat 99.7 8.1E-16 1.8E-20 154.5 25.3 266 142-455 149-459 (476)
247 COG1104 NifS Cysteine sulfinat 99.7 7.2E-16 1.6E-20 149.0 22.3 280 143-455 47-375 (386)
248 PRK08134 O-acetylhomoserine am 99.7 3.1E-15 6.7E-20 151.4 27.7 146 142-300 66-224 (433)
249 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 1.2E-15 2.5E-20 151.5 23.9 283 143-456 58-386 (386)
250 PRK03715 argD acetylornithine 99.7 6.7E-16 1.4E-20 155.1 22.2 268 143-455 77-391 (395)
251 TIGR03588 PseC UDP-4-keto-6-de 99.7 5.7E-15 1.2E-19 148.2 28.4 273 142-455 31-380 (380)
252 PRK06541 hypothetical protein; 99.7 7.3E-16 1.6E-20 157.4 22.1 257 164-455 113-453 (460)
253 KOG1411 Aspartate aminotransfe 99.7 9.1E-17 2E-21 149.2 13.8 335 80-454 38-422 (427)
254 PRK05937 8-amino-7-oxononanoat 99.7 1.9E-15 4.2E-20 151.0 24.6 265 142-455 58-348 (370)
255 KOG1412 Aspartate aminotransfe 99.7 1.4E-15 2.9E-20 139.5 20.3 293 128-455 67-403 (410)
256 PF00266 Aminotran_5: Aminotra 99.7 4.2E-15 9E-20 148.8 26.0 272 143-447 46-371 (371)
257 PRK07812 O-acetylhomoserine am 99.7 6E-15 1.3E-19 149.2 27.1 206 142-375 71-321 (436)
258 PRK07678 aminotransferase; Val 99.7 2.7E-15 5.8E-20 153.1 23.0 265 164-455 106-447 (451)
259 PRK08114 cystathionine beta-ly 99.7 1.6E-14 3.4E-19 143.7 27.2 205 142-375 64-284 (395)
260 PRK06434 cystathionine gamma-l 99.7 1.9E-14 4.2E-19 143.1 27.9 279 142-455 66-382 (384)
261 PRK07482 hypothetical protein; 99.7 2.7E-15 5.8E-20 153.4 22.1 261 164-455 112-452 (461)
262 PRK04013 argD acetylornithine/ 99.7 1.6E-15 3.4E-20 150.1 19.5 254 143-455 69-358 (364)
263 COG0626 MetC Cystathionine bet 99.7 4.4E-14 9.6E-19 138.6 28.8 205 142-375 65-286 (396)
264 PRK15407 lipopolysaccharide bi 99.7 1.8E-14 4E-19 146.3 26.7 158 143-314 66-247 (438)
265 PRK04366 glycine dehydrogenase 99.7 2.6E-14 5.6E-19 147.2 27.8 319 99-455 73-446 (481)
266 TIGR01814 kynureninase kynuren 99.7 9.8E-15 2.1E-19 147.8 24.3 265 162-456 85-406 (406)
267 PRK05639 4-aminobutyrate amino 99.7 8.8E-15 1.9E-19 149.2 24.0 258 164-455 114-441 (457)
268 PRK05965 hypothetical protein; 99.7 2.9E-15 6.3E-20 153.1 20.2 257 163-455 107-445 (459)
269 KOG1404 Alanine-glyoxylate ami 99.7 5.6E-15 1.2E-19 139.8 20.0 308 90-451 55-432 (442)
270 PRK06943 adenosylmethionine--8 99.7 3.8E-15 8.3E-20 151.8 20.5 255 164-455 115-444 (453)
271 PRK07481 hypothetical protein; 99.7 8.9E-15 1.9E-19 149.2 22.7 256 164-455 105-443 (449)
272 PRK05769 4-aminobutyrate amino 99.7 7.4E-15 1.6E-19 149.4 21.7 251 164-455 116-437 (441)
273 PLN02760 4-aminobutyrate:pyruv 99.7 9.2E-15 2E-19 150.5 22.0 255 164-455 152-489 (504)
274 PRK09221 beta alanine--pyruvat 99.7 6.7E-15 1.5E-19 149.8 20.4 255 164-455 110-441 (445)
275 PRK06062 hypothetical protein; 99.7 9.4E-15 2E-19 149.0 21.1 256 164-455 113-443 (451)
276 PRK07483 hypothetical protein; 99.7 1.5E-14 3.2E-19 147.3 22.2 265 164-455 91-435 (443)
277 PRK06105 aminotransferase; Pro 99.6 1.2E-14 2.5E-19 148.7 20.9 258 164-455 110-447 (460)
278 PRK13360 omega amino acid--pyr 99.6 1.8E-14 3.9E-19 146.6 22.0 255 164-455 107-438 (442)
279 PRK05630 adenosylmethionine--8 99.6 2.5E-14 5.5E-19 144.6 22.9 256 164-456 101-419 (422)
280 cd00615 Orn_deC_like Ornithine 99.6 1.4E-15 3E-20 147.2 13.0 144 142-299 61-231 (294)
281 PRK12389 glutamate-1-semialdeh 99.6 2.1E-14 4.5E-19 145.9 22.0 258 164-456 110-426 (428)
282 PRK05613 O-acetylhomoserine am 99.6 5.2E-14 1.1E-18 142.4 24.7 204 143-375 72-326 (437)
283 PRK07480 putative aminotransfe 99.6 2.4E-14 5.3E-19 146.1 20.7 258 164-455 112-446 (456)
284 TIGR01364 serC_1 phosphoserine 99.6 1.9E-13 4E-18 135.1 25.9 261 163-455 55-346 (349)
285 PRK06931 diaminobutyrate--2-ox 99.6 4.6E-14 1E-18 144.2 22.0 257 165-455 123-452 (459)
286 PRK07986 adenosylmethionine--8 99.6 3.1E-14 6.8E-19 144.0 20.5 253 164-456 104-422 (428)
287 PRK12403 putative aminotransfe 99.6 1.2E-13 2.5E-18 141.4 24.9 259 164-455 116-450 (460)
288 PRK07046 aminotransferase; Val 99.6 9.5E-14 2.1E-18 141.5 24.1 258 163-455 130-448 (453)
289 PRK07036 hypothetical protein; 99.6 4.1E-14 8.8E-19 144.9 21.2 255 164-455 113-450 (466)
290 PRK07030 adenosylmethionine--8 99.6 3E-14 6.6E-19 145.7 20.1 253 164-456 108-445 (466)
291 PRK06082 4-aminobutyrate amino 99.6 1.3E-13 2.7E-18 141.0 24.1 256 164-455 131-449 (459)
292 KOG0053 Cystathionine beta-lya 99.6 3.7E-13 8E-18 130.6 25.9 205 142-375 79-298 (409)
293 cd00611 PSAT_like Phosphoserin 99.6 1.1E-13 2.3E-18 137.6 22.9 279 143-455 47-354 (355)
294 PRK06917 hypothetical protein; 99.6 9.8E-14 2.1E-18 141.4 23.2 262 164-455 92-435 (447)
295 PRK06173 adenosylmethionine--8 99.6 6.1E-14 1.3E-18 142.1 21.3 255 164-455 105-423 (429)
296 PRK13034 serine hydroxymethylt 99.6 6.7E-13 1.5E-17 134.4 28.7 275 142-455 72-390 (416)
297 PRK06938 diaminobutyrate--2-ox 99.6 1.1E-13 2.4E-18 141.5 23.0 257 165-455 128-458 (464)
298 PRK08742 adenosylmethionine--8 99.6 5E-14 1.1E-18 144.1 20.1 258 164-455 130-465 (472)
299 PRK06916 adenosylmethionine--8 99.6 4.7E-14 1E-18 144.2 19.7 252 164-455 117-453 (460)
300 PRK06148 hypothetical protein; 99.6 9.5E-14 2.1E-18 154.0 23.4 259 164-455 681-1008(1013)
301 KOG1402 Ornithine aminotransfe 99.6 4.6E-14 1E-18 130.6 15.5 305 93-455 67-425 (427)
302 PRK06149 hypothetical protein; 99.6 5.1E-13 1.1E-17 148.2 25.9 275 143-456 627-969 (972)
303 PLN02482 glutamate-1-semialdeh 99.6 3.3E-13 7.1E-18 137.9 22.5 258 164-456 156-472 (474)
304 PRK08297 L-lysine aminotransfe 99.6 6.3E-13 1.4E-17 135.4 24.6 256 164-455 111-439 (443)
305 cd01494 AAT_I Aspartate aminot 99.6 4.9E-14 1.1E-18 124.2 13.9 146 143-300 3-169 (170)
306 COG0161 BioA Adenosylmethionin 99.6 1.2E-13 2.7E-18 136.3 17.3 262 163-455 105-441 (449)
307 PRK00615 glutamate-1-semialdeh 99.6 5.2E-13 1.1E-17 135.3 22.0 255 164-455 111-426 (433)
308 PLN02724 Molybdenum cofactor s 99.6 1.4E-12 3E-17 142.2 26.8 286 142-454 80-485 (805)
309 COG0399 WecE Predicted pyridox 99.5 7.5E-12 1.6E-16 122.3 28.8 278 142-456 36-372 (374)
310 TIGR00508 bioA adenosylmethion 99.5 7.5E-13 1.6E-17 134.4 21.8 256 164-456 106-425 (427)
311 TIGR03531 selenium_SpcS O-phos 99.5 1E-11 2.2E-16 125.0 26.5 275 143-455 108-444 (444)
312 COG0001 HemL Glutamate-1-semia 99.5 3.7E-12 8.1E-17 124.5 21.9 275 144-455 93-426 (432)
313 PTZ00094 serine hydroxymethylt 99.5 8.6E-12 1.9E-16 127.8 25.7 271 146-455 86-406 (452)
314 PRK03080 phosphoserine aminotr 99.5 1.1E-11 2.3E-16 124.3 25.3 279 142-455 50-371 (378)
315 PF01041 DegT_DnrJ_EryC1: DegT 99.5 6.7E-12 1.4E-16 125.1 23.3 271 142-452 27-363 (363)
316 TIGR00699 GABAtrns_euk 4-amino 99.5 1.7E-12 3.7E-17 131.9 19.1 255 164-455 123-464 (464)
317 TIGR03251 LAT_fam L-lysine 6-t 99.5 1.9E-11 4.2E-16 124.3 26.5 255 164-454 104-431 (431)
318 TIGR01366 serC_3 phosphoserine 99.5 2.2E-11 4.7E-16 121.1 25.5 281 143-456 44-359 (361)
319 PRK13580 serine hydroxymethylt 99.4 8.7E-11 1.9E-15 118.6 26.6 278 143-455 94-443 (493)
320 TIGR02618 tyr_phenol_ly tyrosi 99.4 6E-11 1.3E-15 118.1 24.6 276 131-455 67-424 (450)
321 PRK05355 3-phosphoserine/phosp 99.4 8.4E-11 1.8E-15 116.8 24.8 260 164-455 67-356 (360)
322 KOG1401 Acetylornithine aminot 99.4 8.3E-12 1.8E-16 119.4 15.4 198 162-372 115-353 (433)
323 COG2873 MET17 O-acetylhomoseri 99.4 2.2E-10 4.7E-15 108.6 23.4 284 142-455 64-423 (426)
324 KOG1368 Threonine aldolase [Am 99.4 8.7E-11 1.9E-15 107.8 19.9 301 94-452 21-363 (384)
325 PRK13237 tyrosine phenol-lyase 99.4 2.4E-10 5.1E-15 114.2 24.8 277 131-455 74-431 (460)
326 PRK06209 glutamate-1-semialdeh 99.4 1.5E-11 3.3E-16 125.0 16.8 255 164-455 105-403 (431)
327 PLN02974 adenosylmethionine-8- 99.4 8.5E-11 1.9E-15 126.5 22.9 195 229-456 584-817 (817)
328 KOG1549 Cysteine desulfurase N 99.4 5.7E-11 1.2E-15 115.7 19.0 151 143-301 88-256 (428)
329 PLN02414 glycine dehydrogenase 99.3 3.3E-10 7.2E-15 123.5 26.4 281 143-455 571-905 (993)
330 COG2008 GLY1 Threonine aldolas 99.3 2.6E-10 5.6E-15 108.4 21.7 279 130-455 30-341 (342)
331 PRK04311 selenocysteine syntha 99.3 1.4E-09 3.1E-14 110.7 26.9 284 143-455 130-462 (464)
332 PRK02769 histidine decarboxyla 99.3 7.1E-10 1.5E-14 110.6 23.2 247 166-455 87-370 (380)
333 KOG1359 Glycine C-acetyltransf 99.3 1.4E-10 3.1E-15 106.1 16.3 269 142-455 114-410 (417)
334 TIGR01788 Glu-decarb-GAD gluta 99.3 1.2E-09 2.6E-14 110.5 23.8 288 143-455 79-427 (431)
335 PLN03226 serine hydroxymethylt 99.2 3.8E-09 8.2E-14 108.3 25.9 253 170-455 107-417 (475)
336 PF00202 Aminotran_3: Aminotra 99.2 1.8E-11 3.8E-16 120.7 8.3 184 144-337 59-295 (339)
337 PLN03032 serine decarboxylase; 99.2 3E-09 6.6E-14 105.4 23.4 267 143-454 65-373 (374)
338 TIGR00474 selA seryl-tRNA(sec) 99.2 6.9E-09 1.5E-13 105.4 25.7 281 143-451 125-453 (454)
339 COG0075 Serine-pyruvate aminot 99.2 2.5E-08 5.4E-13 97.7 28.4 262 164-455 57-361 (383)
340 KOG1360 5-aminolevulinate synt 99.2 2.6E-09 5.7E-14 101.7 18.9 271 143-455 219-522 (570)
341 COG1103 Archaea-specific pyrid 99.2 1E-08 2.2E-13 93.1 21.6 268 143-456 64-379 (382)
342 KOG1357 Serine palmitoyltransf 99.1 5.3E-10 1.2E-14 108.1 12.0 277 142-454 184-499 (519)
343 PF00464 SHMT: Serine hydroxym 99.1 1.4E-07 3.1E-12 93.4 28.8 251 168-450 91-398 (399)
344 PLN02271 serine hydroxymethylt 99.1 1.3E-07 2.9E-12 96.3 28.5 261 165-455 217-538 (586)
345 TIGR01365 serC_2 phosphoserine 99.1 9.4E-08 2E-12 94.8 26.9 258 165-452 60-368 (374)
346 PLN02452 phosphoserine transam 99.1 3.6E-08 7.8E-13 97.7 23.4 261 165-455 73-361 (365)
347 PRK05367 glycine dehydrogenase 99.0 6.4E-08 1.4E-12 106.3 25.3 270 144-452 125-437 (954)
348 PLN02414 glycine dehydrogenase 99.0 9.7E-08 2.1E-12 104.5 26.1 272 143-453 151-465 (993)
349 PLN02994 1-aminocyclopropane-1 99.0 6.7E-10 1.4E-14 95.7 6.7 103 91-203 40-153 (153)
350 PRK15029 arginine decarboxylas 99.0 1.1E-07 2.4E-12 101.4 23.7 159 142-314 207-416 (755)
351 PRK05367 glycine dehydrogenase 99.0 3.6E-07 7.7E-12 100.5 27.6 325 94-455 499-873 (954)
352 COG0112 GlyA Glycine/serine hy 99.0 1.1E-06 2.3E-11 84.7 27.3 260 165-456 91-389 (413)
353 PF01276 OKR_DC_1: Orn/Lys/Arg 98.9 1.4E-08 3E-13 100.9 13.8 159 142-314 68-269 (417)
354 KOG2862 Alanine-glyoxylate ami 98.9 2.6E-06 5.5E-11 79.3 26.2 263 165-455 70-380 (385)
355 PRK15399 lysine decarboxylase 98.9 1.1E-06 2.4E-11 92.8 25.5 158 142-314 197-394 (713)
356 PRK15400 lysine decarboxylase 98.8 9E-07 1.9E-11 93.5 24.0 137 142-294 197-373 (714)
357 PRK12462 phosphoserine aminotr 98.8 2.7E-06 5.8E-11 83.8 25.9 260 165-454 69-359 (364)
358 PF04863 EGF_alliinase: Alliin 98.8 1.1E-09 2.5E-14 73.4 1.4 42 36-86 1-42 (56)
359 PRK13578 ornithine decarboxyla 98.8 1.2E-06 2.6E-11 92.7 24.2 145 142-301 176-369 (720)
360 PLN02880 tyrosine decarboxylas 98.8 1.5E-06 3.2E-11 89.7 23.2 285 143-455 121-482 (490)
361 TIGR00461 gcvP glycine dehydro 98.8 2.6E-06 5.7E-11 92.5 25.7 262 167-454 550-864 (939)
362 TIGR03799 NOD_PanD_pyr putativ 98.8 4.5E-06 9.7E-11 86.5 26.6 284 143-450 128-518 (522)
363 PRK12566 glycine dehydrogenase 98.8 3.8E-06 8.2E-11 90.8 26.5 263 171-455 567-874 (954)
364 PLN02590 probable tyrosine dec 98.8 4.1E-06 8.9E-11 86.8 25.8 288 143-454 169-529 (539)
365 PLN02263 serine decarboxylase 98.7 9.7E-06 2.1E-10 82.1 26.0 270 142-454 131-440 (470)
366 COG1982 LdcC Arginine/lysine/o 98.7 8E-06 1.7E-10 83.2 23.4 264 142-424 72-376 (557)
367 TIGR02617 tnaA_trp_ase tryptop 98.6 1.8E-05 3.9E-10 78.8 22.7 314 92-455 39-439 (467)
368 PF01212 Beta_elim_lyase: Beta 98.6 7.1E-08 1.5E-12 92.5 5.3 165 130-314 24-220 (290)
369 COG3844 Kynureninase [Amino ac 98.5 5.5E-05 1.2E-09 71.1 21.1 277 143-456 79-401 (407)
370 TIGR00461 gcvP glycine dehydro 98.3 0.00014 3.1E-09 79.2 24.3 266 144-452 113-426 (939)
371 COG0076 GadB Glutamate decarbo 98.3 0.00012 2.7E-09 74.6 21.7 252 143-421 100-401 (460)
372 KOG1403 Predicted alanine-glyo 98.3 0.0005 1.1E-08 64.0 22.5 255 164-455 103-435 (452)
373 KOG1358 Serine palmitoyltransf 98.2 1.5E-05 3.3E-10 76.5 12.6 272 142-455 141-463 (467)
374 PF02347 GDC-P: Glycine cleava 97.9 0.0013 2.8E-08 65.9 19.9 246 168-451 132-429 (429)
375 PF00282 Pyridoxal_deC: Pyrido 97.9 0.00084 1.8E-08 67.1 18.4 225 143-378 78-361 (373)
376 COG0403 GcvP Glycine cleavage 97.7 0.057 1.2E-06 53.3 26.5 250 168-454 142-447 (450)
377 COG1921 SelA Selenocysteine sy 97.6 0.0027 5.9E-08 62.3 15.3 166 163-337 83-271 (395)
378 COG3033 TnaA Tryptophanase [Am 97.4 0.13 2.7E-06 49.7 23.2 291 130-455 74-442 (471)
379 COG1932 SerC Phosphoserine ami 97.4 0.087 1.9E-06 51.0 22.2 268 155-455 62-361 (365)
380 PF06838 Met_gamma_lyase: Meth 97.3 0.0024 5.2E-08 61.6 11.2 136 170-314 79-250 (403)
381 KOG2467 Glycine/serine hydroxy 97.3 0.085 1.8E-06 51.0 20.6 271 154-455 97-424 (477)
382 KOG1405 4-aminobutyrate aminot 97.2 0.0076 1.6E-07 57.6 13.5 189 231-456 273-482 (484)
383 PF03841 SelA: L-seryl-tRNA se 97.2 0.0014 3.1E-08 63.7 8.8 201 163-371 62-296 (367)
384 PRK12566 glycine dehydrogenase 97.1 0.21 4.6E-06 55.0 24.6 225 193-452 170-439 (954)
385 PF05889 SLA_LP_auto_ag: Solub 96.8 0.11 2.3E-06 51.4 17.7 272 152-456 65-389 (389)
386 KOG1383 Glutamate decarboxylas 96.4 0.13 2.8E-06 51.3 15.0 283 143-454 119-443 (491)
387 COG1003 GcvP Glycine cleavage 95.3 0.3 6.4E-06 48.5 12.1 323 92-455 64-445 (496)
388 TIGR03811 tyr_de_CO2_Ent tyros 94.4 1.5 3.3E-05 46.5 15.7 217 143-371 122-475 (608)
389 COG4100 Cystathionine beta-lya 92.1 0.57 1.2E-05 44.3 7.2 154 142-309 67-256 (416)
390 PLN02672 methionine S-methyltr 89.5 2.8 6.1E-05 47.4 11.0 187 130-327 421-641 (1082)
391 KOG2790 Phosphoserine aminotra 88.1 24 0.00053 33.4 16.4 260 165-455 72-366 (370)
392 KOG0629 Glutamate decarboxylas 86.8 37 0.0008 34.1 18.8 284 149-454 147-506 (510)
393 KOG0628 Aromatic-L-amino-acid/ 86.1 16 0.00035 36.9 12.7 123 142-265 111-276 (511)
394 KOG3846 L-kynurenine hydrolase 84.4 40 0.00086 32.4 16.5 280 142-455 113-459 (465)
395 COG1648 CysG Siroheme synthase 75.8 63 0.0014 29.4 12.6 93 163-262 12-106 (210)
396 KOG1256 Long-chain acyl-CoA sy 70.0 20 0.00044 38.4 8.3 162 164-337 181-372 (691)
397 KOG2040 Glycine dehydrogenase 68.8 1.7E+02 0.0037 31.4 23.1 87 347-452 390-478 (1001)
398 TIGR01470 cysG_Nterm siroheme 53.7 57 0.0012 29.5 7.3 92 163-262 9-103 (205)
399 cd04920 ACT_AKiii-DAPDC_2 ACT 28.9 1.1E+02 0.0025 21.4 4.2 45 406-455 17-61 (63)
400 cd04915 ACT_AK-Ectoine_2 ACT d 26.6 1.6E+02 0.0036 20.9 4.7 47 406-455 18-64 (66)
401 PF05127 Helicase_RecD: Helica 25.6 53 0.0011 29.0 2.2 44 169-215 7-50 (177)
402 PF05687 DUF822: Plant protein 25.2 1.8E+02 0.0039 24.6 5.1 18 405-422 47-64 (150)
403 PRK10637 cysG siroheme synthas 25.2 7.6E+02 0.016 25.4 13.2 93 163-262 12-106 (457)
404 COG1023 Gnd Predicted 6-phosph 25.1 70 0.0015 29.8 2.9 86 229-314 59-150 (300)
405 PRK08246 threonine dehydratase 24.2 2.8E+02 0.0062 26.7 7.3 73 142-221 51-123 (310)
406 cd06448 L-Ser-dehyd Serine deh 23.4 5.4E+02 0.012 24.9 9.1 56 163-221 51-106 (316)
407 PRK00421 murC UDP-N-acetylmura 22.5 3.4E+02 0.0073 27.8 7.9 86 166-260 11-96 (461)
408 PRK06450 threonine synthase; V 22.4 1.8E+02 0.0039 28.6 5.6 76 164-242 98-175 (338)
409 COG4050 Uncharacterized protei 22.3 2.2E+02 0.0048 23.1 4.9 48 397-456 98-145 (152)
410 KOG1467 Translation initiation 21.7 3.6E+02 0.0078 27.8 7.3 100 163-264 359-472 (556)
411 cd04891 ACT_AK-LysC-DapG-like_ 21.6 1.8E+02 0.0038 19.3 4.0 46 406-451 15-60 (61)
412 cd04937 ACT_AKi-DapG-BS_2 ACT 21.3 1.9E+02 0.0041 20.2 4.2 46 405-455 17-62 (64)
413 COG0031 CysK Cysteine synthase 21.2 4.1E+02 0.0089 25.7 7.5 100 144-247 40-157 (300)
414 PLN02970 serine racemase 21.2 1.8E+02 0.0039 28.4 5.3 57 164-223 76-132 (328)
415 cd04922 ACT_AKi-HSDH-ThrA_2 AC 20.1 2.2E+02 0.0047 19.6 4.3 47 406-455 18-64 (66)
No 1
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=100.00 E-value=6.1e-58 Score=425.30 Aligned_cols=357 Identities=60% Similarity=1.052 Sum_probs=287.4
Q ss_pred EEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHH
Q 012785 97 INVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLF 176 (456)
Q Consensus 97 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al 176 (456)
+|+++|||.+.+++|.+..+....++++|++|+|+.+..+. |+++++|.+.|.++|+.+||++++...|++++|++|++
T Consensus 1 ~d~d~GDP~~~E~yW~~~~~~~avvi~gw~rMSY~~~~~~~-~f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~ 79 (363)
T PF04864_consen 1 ADADSGDPTFFEPYWRRHGDSSAVVIPGWHRMSYFSDSSNG-WFISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLF 79 (363)
T ss_dssp EEESS---GGGHHHHCCTHHHH-EEE-TTTT-SSSS-TTSS-TTS-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHH
T ss_pred CCcCCCCchhhHHHHHhcCcceeEEEeccccceeEEecCCc-eeccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHH
Confidence 68999999999999999988888889999999988866554 89999999999999999999999999999999999999
Q ss_pred HHHHHHhcCC--CCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCccccccC---CCeEEEEcCCCCCCcccchHHhh
Q 012785 177 QAALYALSSQ--DASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKRFNKD---GPYIELVTSPNNPDGSVRQSVVN 251 (456)
Q Consensus 177 ~~~~~~l~~~--gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~---~~~~i~v~~P~NPtG~~~~~l~~ 251 (456)
++++.+|... ..++|.+|+...|+|+.|..+.+.+..+.+.|..|...+... .+-+.+|++||||.|.+...+++
T Consensus 80 ~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~Gda~~~~~~~~~~~~IElVTSPNNPDG~lr~~V~~ 159 (363)
T PF04864_consen 80 NAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWAGDASNFKNSDNPSPYIELVTSPNNPDGQLREAVLN 159 (363)
T ss_dssp HHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEEEECCCGTT-S-CCGEEEEEESS-TTT------SST
T ss_pred HHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccccccHHhhccCCCCCCeEEEEeCCCCCcccccchhcC
Confidence 9999999877 567889999999999999999999999999999998888432 46788999999999999988999
Q ss_pred hcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHH
Q 012785 252 RSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKV 331 (456)
Q Consensus 252 ~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~ 331 (456)
..+..+|.|-+|+||+|+|++...|++|+++|+||..|++|.|+||++++|++++++|.++...++.|+|..+|..++++
T Consensus 160 g~~~k~I~D~AYYWPhyTpI~~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~ki 239 (363)
T PF04864_consen 160 GSSGKVIHDLAYYWPHYTPITAPADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKI 239 (363)
T ss_dssp TTEEEEEEE-TT-STTTS---S-B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHH
T ss_pred CCCcceeeeeeeecccccccCCCCCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC-ccHHHHH
Q 012785 332 LKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE-QEIEDCE 410 (456)
Q Consensus 332 L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~-~~~~~~~ 410 (456)
|+.+.+++... ....++++.-++.+++||+.|.+.++....|+++....++|+||+++.++.++|.|++|+ ++.++|+
T Consensus 240 Lk~v~~~~~~~-~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~DC~ 318 (363)
T PF04864_consen 240 LKVVLDGYGTE-KGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDEDCY 318 (363)
T ss_dssp HHHHHHHCCHH-TTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGGSSHH
T ss_pred HHHHHhcccCC-CCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcccccHH
Confidence 99988775310 000158999999999999999999999999999999999999999999999999999997 4568999
Q ss_pred HHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 411 SFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 411 ~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
..|+++||..+.|..||.++.|+|||+..++++++.++++|.+++
T Consensus 319 ~~l~~~~I~tr~G~~fga~~ryVRlSml~~~d~Fd~l~~rL~~lv 363 (363)
T PF04864_consen 319 AVLREAKIITRSGVLFGADSRYVRLSMLKRDDDFDQLLERLSKLV 363 (363)
T ss_dssp HHHHCTTEEEEEGGGGTS-TTEEEEESSS-HHHHHHHHHHHHCCH
T ss_pred HHHHhCCcccCCCCccCCCCCeEEEeccCCHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999889999999999998764
No 2
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-52 Score=413.96 Aligned_cols=328 Identities=22% Similarity=0.291 Sum_probs=276.9
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccCH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTGS 172 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G~ 172 (456)
.++|+|++|+|++++|+.+.+... .++..+.. .|++..| .++||++|++++.+ +|....++++|++|+|+
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~-~a~~~~~~---~Y~~~~G-----~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga 98 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAI-EALEEGGT---HYTPSAG-----IPELREAIAEKYKRRYGLDVDPEEEIIVTAGA 98 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHH-HHHhcccC---CCCCCCC-----CHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCH
Confidence 579999999999999987776433 22333221 4558899 49999999999965 56566665669999999
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc---------ccccc---CCCeEEEEcCCCC
Q 012785 173 TQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA---------KRFNK---DGPYIELVTSPNN 240 (456)
Q Consensus 173 ~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~---------~~l~~---~~~~~i~v~~P~N 240 (456)
+++|.+++.+++++|| +|++++|+|+.|...+..+|++++.++++. +.++. .++|++++++|||
T Consensus 99 ~~al~~~~~a~~~pGD----eVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~N 174 (393)
T COG0436 99 KEALFLAFLALLNPGD----EVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNN 174 (393)
T ss_pred HHHHHHHHHHhcCCCC----EEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCC
Confidence 9999999999999999 999999999999999999999988777543 33322 2789999999999
Q ss_pred CCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCC---CCCCCcEEEecCccccCCCCceEEEEEEeCHH
Q 012785 241 PDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKDME 304 (456)
Q Consensus 241 PtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~ 304 (456)
|||.++++ +|++++++||.||+|.+..| .++. ...+++|+++||||+++++|||+||+++++++
T Consensus 175 PTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~ 254 (393)
T COG0436 175 PTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEE 254 (393)
T ss_pred CcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHH
Confidence 99999994 78999999999999986332 3322 22478999999999999999999999996688
Q ss_pred HHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCcc
Q 012785 305 VAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPE-LPSQF 383 (456)
Q Consensus 305 ~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~g~~ 383 (456)
+++.+.+.+.....+++.+.|.++..+|+ ... . .++++.+++.+++||+.+.+.|.+.+++++.. |.|++
T Consensus 255 l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~---~~~-----~-~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~ 325 (393)
T COG0436 255 LIAALRKLKSYLTSCAPTPAQYAAIAALN---GPQ-----S-DEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAF 325 (393)
T ss_pred HHHHHHHHHHhcccCCCHHHHHHHHHHhc---Ccc-----c-hHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeE
Confidence 99999999998999999999999999998 221 1 35788888999999999999999998888888 77998
Q ss_pred cccccccCCCCCceEEeecCc---cHHHHHHHHHhCCEEeecCCCCCC--CCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 384 CTFLGRAFEPQPAFAWLKCEQ---EIEDCESFLKGNKILTRSGKHFGF--SPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 384 ~~~~~~~~~~~~~f~~~~~~~---~~~~~~~~l~~~gI~v~pg~~fg~--~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
|+|++++. +.+++.++|+++||.|.||+.||. +.++||||++.+.+++++++++|.++++
T Consensus 326 -------------Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~~~ 390 (393)
T COG0436 326 -------------YLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLARFLA 390 (393)
T ss_pred -------------EEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHHHHH
Confidence 99999963 467888899999999999999995 5799999999888999999999998763
No 3
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=2e-46 Score=381.60 Aligned_cols=326 Identities=17% Similarity=0.222 Sum_probs=274.4
Q ss_pred CCeEEecCCCCCC---CchhHhhhcccccccccCccc-cccccCCCCcccCCCHHHHHHHHHHHH-HhcCccCCCceEEE
Q 012785 94 ERIINVDHGDPTM---YEKYWQKVGDKTTIVIPGWQS-LSYFSDVRNLCWFLEPEFAKEVVRLHK-VVGNAITENHHIVV 168 (456)
Q Consensus 94 ~~~i~l~~g~p~~---~~~~~~~~~~~~~~~~~~~~~-~~~y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~I~~ 168 (456)
..+++|+.|.|+. +...|.... ...+...... ..+|.+..| .++||++|++++. ..|..+. +++|++
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~--~~~~~~~~~~~~~~y~~~~G-----~~~LR~~ia~~l~~~~g~~~~-~~~Iii 160 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRAL--ARVLRNYGASLALQYGPTAG-----LPELREAIAAYLLARRGISCE-PEQIVI 160 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHH--HHHHhhcchhhhhcCCCCCC-----cHHHHHHHHHHHHHhcCCccC-cCeEEE
Confidence 6789999998764 333333321 1112111122 457888889 5999999999997 7788886 469999
Q ss_pred ccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCccccccC---------CCeEEEE-cCC
Q 012785 169 GTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKRFNKD---------GPYIELV-TSP 238 (456)
Q Consensus 169 t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~---------~~~~i~v-~~P 238 (456)
|+|++++++++++.+++||| .|++++|+|+....+++.+|++++++++|.+++..+ ++|++++ ++.
T Consensus 161 T~G~q~al~l~~~~l~~pGd----~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 161 TSGAQQALDLLLRLLLDPGD----TVLVEDPTYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred eCCHHHHHHHHHHHhCCCCC----EEEEcCCCcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC
Confidence 99999999999999999999 999999999999999999999999999998887542 4676655 566
Q ss_pred CCCCcccchH--------HhhhcCcEEEeeecCCCCCCC-----CCC--CCCCCcEEEecCccccCCCCceEEEEEEeCH
Q 012785 239 NNPDGSVRQS--------VVNRSGGILVHDLAYYWPQYT-----SIT--YPADHDLMLFTVSKSTGHAGTRIGWALVKDM 303 (456)
Q Consensus 239 ~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~~-----~~~--~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~ 303 (456)
|||||.+|+. +|++++++|||||.|.+..+. ++. +..++|||++||||++. ||+|+||+++| +
T Consensus 237 qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~-PglRlG~vv~p-~ 314 (459)
T COG1167 237 QNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA-PGLRLGYVVAP-P 314 (459)
T ss_pred CCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcc-cccceeeeeCC-H
Confidence 9999999993 899999999999999864332 122 34589999999999997 99999999998 9
Q ss_pred HHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcC--CccccCCCC
Q 012785 304 EVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSG--LFSVPELPS 381 (456)
Q Consensus 304 ~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~g 381 (456)
++++++...+...+.+++.+.|.+++..|. ++ ++++|++++++.|++|++.+.+.|++.. ...+..|.|
T Consensus 315 ~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~---~G------~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~g 385 (459)
T COG1167 315 ELIEKLLRLKQAADLGPSSLSQAALAAFLL---SG------HYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEG 385 (459)
T ss_pred HHHHHHHHHHHHhcCCCChHHHHHHHHHHH---cC------CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCc
Confidence 999999999999999999999999999998 44 3699999999999999999999999973 688899999
Q ss_pred cccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeec-CCCCCC---CCCeEEEEecC-ChhHHHHHHHHHHhh
Q 012785 382 QFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRS-GKHFGF---SPKYVRISMLD-RDENYNLFVQRLSKI 454 (456)
Q Consensus 382 ~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~p-g~~fg~---~~~~iRis~~~-~~e~i~~~l~~L~~~ 454 (456)
|+ |+|+++++ +...+.+.+.++||.+.| |..|.. ..+++|++|+. +++++++++++|.++
T Consensus 386 G~-------------flwl~l~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~ 452 (459)
T COG1167 386 GL-------------FLWLELPEGIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAAL 452 (459)
T ss_pred eE-------------EEEEEcCCCCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 99 99999976 577889999999999999 888854 35699999998 889999999999887
Q ss_pred h
Q 012785 455 L 455 (456)
Q Consensus 455 l 455 (456)
+
T Consensus 453 ~ 453 (459)
T COG1167 453 L 453 (459)
T ss_pred H
Confidence 5
No 4
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=2.3e-46 Score=377.45 Aligned_cols=324 Identities=15% Similarity=0.204 Sum_probs=262.7
Q ss_pred cCCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCc-cCCCceEEE
Q 012785 91 DGGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNA-ITENHHIVV 168 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~-~~~~~~I~~ 168 (456)
..++++|+|+.|+|++++++.+.+... ..+ . ....|++..| .++||++||+|++. +|.. ++++++|++
T Consensus 26 ~~~~~~i~l~~~~p~~~~~~~~~~~~~-~~~-~---~~~~Y~~~~G-----~~~lr~~ia~~~~~~~g~~~~~~~~~i~i 95 (396)
T PRK09147 26 PADLPPISLSIGEPKHPTPAFIKDALA-ANL-D---GLASYPTTAG-----LPALREAIAAWLERRYGLPALDPATQVLP 95 (396)
T ss_pred ccCCCeEecCCCCCCCCCCHHHHHHHH-HHh-h---hhcCCCCCCC-----CHHHHHHHHHHHHHHhCCCcCCccceEEE
Confidence 346789999999999887765554322 111 1 2457999999 59999999999965 4766 654459999
Q ss_pred ccCHHHHHHHHHHHhcCC---CCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc--------cccc---CCCeEEE
Q 012785 169 GTGSTQLFQAALYALSSQ---DASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK--------RFNK---DGPYIEL 234 (456)
Q Consensus 169 t~G~~~al~~~~~~l~~~---gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~--------~l~~---~~~~~i~ 234 (456)
|+|+++++.+++++++++ || .|++++|+|+.|...++..|++++.+++|.+ .++. .++++++
T Consensus 96 t~G~~~al~~~~~~l~~~~~~gd----~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~ 171 (396)
T PRK09147 96 VNGSREALFAFAQTVIDRDGPGP----LVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLF 171 (396)
T ss_pred CCChHHHHHHHHHHHcCCCCCCC----EEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEE
Confidence 999999999999999999 88 9999999999999999999999998876532 2322 2678999
Q ss_pred EcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCCC----CCC----------CCCCCcEEEecCccccCCCC
Q 012785 235 VTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQYT----SIT----------YPADHDLMLFTVSKSTGHAG 292 (456)
Q Consensus 235 v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~~----~~~----------~~~~~~i~i~S~SK~~g~~G 292 (456)
++|||||||.+++. +|++++++||+||+|.+..+. +.. ...+++|+++||||.|++||
T Consensus 172 l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G 251 (396)
T PRK09147 172 VCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPG 251 (396)
T ss_pred EcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCcc
Confidence 99999999999983 688999999999999863221 110 12468999999999999999
Q ss_pred ceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 012785 293 TRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSG 372 (456)
Q Consensus 293 ~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~ 372 (456)
+|+||++++ +++++++.+.......+++.+.|.++.+.+. + ++++++.++.++++++.+.+.|++.
T Consensus 252 lRiG~~~~~-~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~---~---------~~~~~~~~~~~~~~~~~~~~~L~~~- 317 (396)
T PRK09147 252 LRSGFVAGD-AALLKKFLLYRTYHGCAMPPAVQAASIAAWN---D---------EAHVRENRALYREKFDAVTPILAPV- 317 (396)
T ss_pred ceeeeecCC-HHHHHHHHHHhhhcccCCCHHHHHHHHHHhc---c---------hhHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 999999997 9999999887766677899999999887775 1 5688999999999999999999874
Q ss_pred CccccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhCCEEeecCCCCCC-------CCCeEEEEecCChhHH
Q 012785 373 LFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGNKILTRSGKHFGF-------SPKYVRISMLDRDENY 444 (456)
Q Consensus 373 ~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~gI~v~pg~~fg~-------~~~~iRis~~~~~e~i 444 (456)
+.+..|+|++ |+|++++. +.+.+..+++++||.+.||..|+. +.+++||+|+.+++++
T Consensus 318 -~~~~~p~~g~-------------f~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~~l 383 (396)
T PRK09147 318 -LDVQLPDAGF-------------YLWAKVPGDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLAEC 383 (396)
T ss_pred -cCCCCCCeeE-------------EEEEECCCCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCHHHH
Confidence 5566777877 99999974 334445556789999999999862 2579999998889999
Q ss_pred HHHHHHHHhhhC
Q 012785 445 NLFVQRLSKILS 456 (456)
Q Consensus 445 ~~~l~~L~~~l~ 456 (456)
++++++|++++.
T Consensus 384 ~~~l~rl~~~~~ 395 (396)
T PRK09147 384 VEAAERIVDFCR 395 (396)
T ss_pred HHHHHHHHHHhc
Confidence 999999998763
No 5
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=1.8e-46 Score=382.14 Aligned_cols=321 Identities=18% Similarity=0.189 Sum_probs=261.1
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGST 173 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~ 173 (456)
..+++|+.|.|+..+++.+.+.. .........|+++.| .++||+++++|++... .++++|++|+|++
T Consensus 85 ~~~i~L~~g~p~~~~~p~~~~~~-----~~~~~~~~~Y~~~~g-----~~~lr~~ia~~~~~~~---~~~~~Iiit~G~~ 151 (431)
T PRK15481 85 TPLHDLAGGNPDPQRLPDLSRYF-----ARLSRTPRLYGDAPV-----SPELHAWAARWLRDDC---PVAFEIDLTSGAI 151 (431)
T ss_pred chhhhhhcCCCChhHhHHHHHHH-----HHhhhhhhhcCCcCC-----CHHHHHHHHHHHhhcc---CCcCeEEEecCcH
Confidence 35789999999887655433221 111112346999998 5999999999987521 1346999999999
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCccccc-----c---CCCeEEEEc-CCCCCCcc
Q 012785 174 QLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKRFN-----K---DGPYIELVT-SPNNPDGS 244 (456)
Q Consensus 174 ~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~-----~---~~~~~i~v~-~P~NPtG~ 244 (456)
++|.+++++++++|| .|++++|+|+.|...++..|++++.+++|.+++. . .++++++++ |||||||.
T Consensus 152 ~al~~~~~~l~~pgd----~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~ 227 (431)
T PRK15481 152 DAIERLLCAHLLPGD----SVAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPEKLERALAQGARAVILTPRAHNPTGC 227 (431)
T ss_pred HHHHHHHHHhCCCCC----EEEEeCCCcHHHHHHHHHcCCeEEeeccCCCCCCHHHHHHHHhcCCCEEEECCCCCCCCCc
Confidence 999999999999999 9999999999999999999999999887654442 1 256777776 99999999
Q ss_pred cchH--------Hhhhc-CcEEEeeecCCCCCC---CC-CCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHH
Q 012785 245 VRQS--------VVNRS-GGILVHDLAYYWPQY---TS-ITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTK 311 (456)
Q Consensus 245 ~~~~--------l~~~~-~~~iI~De~y~~~~~---~~-~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~ 311 (456)
+++. +|+++ +++||+||+|.+..+ .+ +....+++|+++||||+|| ||+|+||++++ +++++.+..
T Consensus 228 ~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~~-~~~~~~~~~ 305 (431)
T PRK15481 228 SLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-PDLRLAFVASD-SATSARLRL 305 (431)
T ss_pred cCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-CCceeEEEeCC-HHHHHHHHH
Confidence 9993 67888 999999999985322 12 2233468999999999999 99999999997 999999987
Q ss_pred HHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccC
Q 012785 312 YIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAF 391 (456)
Q Consensus 312 ~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~ 391 (456)
.......++|.+.|.++..+|+ ++ .++++++++++.++++++.+.+.|++.+ +.+..|.||+
T Consensus 306 ~~~~~~~~~s~~~q~a~~~~l~---~~------~~~~~l~~~~~~~~~~r~~~~~~L~~~~-~~~~~p~gg~-------- 367 (431)
T PRK15481 306 RLNSGTQWVSHLLQDLVYACLT---DP------EYQARLAQARLFYAQRRQKLARALQQYG-IAIPSPGDGL-------- 367 (431)
T ss_pred HHhccccCCCHHHHHHHHHHHh---Cc------cHHHHHHHHHHHHHHHHHHHHHHHHHcC-CccccCCCeE--------
Confidence 7665567789999999999998 44 2467899999999999999999999874 5666677887
Q ss_pred CCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCC--CCCeEEEEecC-ChhHHHHHHHHHHhhhC
Q 012785 392 EPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGF--SPKYVRISMLD-RDENYNLFVQRLSKILS 456 (456)
Q Consensus 392 ~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~--~~~~iRis~~~-~~e~i~~~l~~L~~~l~ 456 (456)
|+|++++.+.+.+.+.|.++||.++||+.|+. ..+++||+++. +++++++++++|++++.
T Consensus 368 -----f~~~~l~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 368 -----NLWLPLDTDSQATALTLAKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred -----EEEEECCCCHHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 99999976566777778899999999999964 24689999986 78999999999998863
No 6
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=2.8e-46 Score=375.99 Aligned_cols=327 Identities=17% Similarity=0.232 Sum_probs=258.3
Q ss_pred cCCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEc
Q 012785 91 DGGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVG 169 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t 169 (456)
..+.++|+|+.|+|++++++.+.+... ..+... ....|++..| .++||++||+|+.. +|..+.++++|++|
T Consensus 27 ~~~~~~i~l~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~Y~~~~G-----~~~lr~aia~~~~~~~g~~~~~~~~I~it 98 (388)
T PRK07366 27 AAGKELIDLSLGSSDLPAPAHALEAIA-QSLHDP--STHGYLLFHG-----TLDFREAAAQWYEQRFGLAVDPETEVLPL 98 (388)
T ss_pred hcCCCeEEeCCCCCCCCCCHHHHHHHH-HHHhCc--ccCCCCCCCC-----CHHHHHHHHHHHHHhhCCcCCCcCeEEEC
Confidence 356789999999999887665544322 111111 1235888888 59999999999954 57666543379999
Q ss_pred cCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc--------cccc---CCCeEEEEcCC
Q 012785 170 TGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK--------RFNK---DGPYIELVTSP 238 (456)
Q Consensus 170 ~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~--------~l~~---~~~~~i~v~~P 238 (456)
+|+++++.+++++++.+|| +|++++|+|+.|...++..|++++.+++|.+ .+.. .++++++++||
T Consensus 99 ~Gs~~al~~~~~~l~~~gd----~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p 174 (388)
T PRK07366 99 IGSQEGTAHLPLAVLNPGD----FALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYP 174 (388)
T ss_pred CCcHHHHHHHHHHhCCCCC----EEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCC
Confidence 9999999999999999999 9999999999999999999999998877643 2211 25789999999
Q ss_pred CCCCcccchH--------HhhhcCcEEEeeecCCCCCC------CCCCC---CCCCcEEEecCccccCCCCceEEEEEEe
Q 012785 239 NNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY------TSITY---PADHDLMLFTVSKSTGHAGTRIGWALVK 301 (456)
Q Consensus 239 ~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~------~~~~~---~~~~~i~i~S~SK~~g~~G~RiG~l~~~ 301 (456)
|||||.+++. +|++++++||+||+|.+..+ .++.. ..+++|+++||||+||+||+|+||++++
T Consensus 175 ~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~ 254 (388)
T PRK07366 175 HNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGN 254 (388)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCC
Confidence 9999999993 78889999999999986322 12221 2246899999999999999999999996
Q ss_pred CHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCC
Q 012785 302 DMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPS 381 (456)
Q Consensus 302 ~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g 381 (456)
+++++++.+.+.....+.++..|.++.+.+. +. ++++++.++.++++++.+.+.|++++ +.+..|.|
T Consensus 255 -~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~---~~--------~~~l~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~ 321 (388)
T PRK07366 255 -AQLIQALRQVKAVVDFNQYRGILNGAIAALT---GP--------QATVQQTVQIFRQRRDAFINALHQIG-WPVPLPEA 321 (388)
T ss_pred -HHHHHHHHHHHhhcccCCCHHHHHHHHHHHh---Cc--------HHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCCe
Confidence 9999999988776666654444555555554 22 67899999999999999999999875 56666777
Q ss_pred cccccccccCCCCCceEEeecCc----cHHHH-HHHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 382 QFCTFLGRAFEPQPAFAWLKCEQ----EIEDC-ESFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 382 ~~~~~~~~~~~~~~~f~~~~~~~----~~~~~-~~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
++ |+|+++++ +...+ ..+++++||.++||+.|+. ..+++||+++.+++++++++++|++++
T Consensus 322 g~-------------f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 322 TM-------------YVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAFL 388 (388)
T ss_pred eE-------------EEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHhC
Confidence 77 99999964 23444 4556789999999999974 468999999888999999999999864
No 7
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=5.6e-46 Score=375.59 Aligned_cols=325 Identities=17% Similarity=0.264 Sum_probs=267.1
Q ss_pred CCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccC
Q 012785 93 GERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTG 171 (456)
Q Consensus 93 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G 171 (456)
..++|+|+.|+|++++++.+.+... ..+..+ ...|++..| .++||++++++++. +|....++++|++|+|
T Consensus 53 ~~~~i~l~~G~P~~~~~~~~~~~~~-~~~~~~---~~~Y~~~~G-----~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G 123 (413)
T PLN00175 53 KHGAINLGQGFPNFDGPDFVKEAAI-QAIRDG---KNQYARGFG-----VPELNSAIAERFKKDTGLVVDPEKEVTVTSG 123 (413)
T ss_pred cCCeEecCCCCCCCCCCHHHHHHHH-HHHhcC---CCCcCCCCC-----CHHHHHHHHHHHHHHhCCCCCCCCCEEEeCC
Confidence 3578999999999887766554322 222222 247999999 59999999999964 5666654347999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc-------ccccc---CCCeEEEEcCCCCC
Q 012785 172 STQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA-------KRFNK---DGPYIELVTSPNNP 241 (456)
Q Consensus 172 ~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~-------~~l~~---~~~~~i~v~~P~NP 241 (456)
+++++.+++.+++++|| +|++++|+|+.+...++..|++++.++++. +.++. .++++++++|||||
T Consensus 124 ~~~al~~~~~~l~~~gd----~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~NP 199 (413)
T PLN00175 124 CTEAIAATILGLINPGD----EVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPHNP 199 (413)
T ss_pred HHHHHHHHHHHhCCCCC----EEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCCCC
Confidence 99999999999999999 999999999999999999999998877653 33332 36789999999999
Q ss_pred CcccchH--------HhhhcCcEEEeeecCCCCCC----CCCC---CCCCCcEEEecCccccCCCCceEEEEEEeCHHHH
Q 012785 242 DGSVRQS--------VVNRSGGILVHDLAYYWPQY----TSIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVA 306 (456)
Q Consensus 242 tG~~~~~--------l~~~~~~~iI~De~y~~~~~----~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~ 306 (456)
||.++++ +|++++++||+||+|.+..+ .++. ...+++|+++||||.|++||+|+||++++ ++++
T Consensus 200 tG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~-~~l~ 278 (413)
T PLN00175 200 TGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLT 278 (413)
T ss_pred CCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeC-HHHH
Confidence 9999982 68899999999999985322 1222 23578999999999999999999999997 9999
Q ss_pred HHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccccc
Q 012785 307 KKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTF 386 (456)
Q Consensus 307 ~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~ 386 (456)
+.+.+......++++.+.|.++.++|+ ++ +.++++.++.++++++.+.+.|++.+ +.+..|+|++
T Consensus 279 ~~l~~~~~~~~~~~s~~~Q~a~~~~l~---~~--------~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~p~g~~--- 343 (413)
T PLN00175 279 WGVRQAHSFLTFATATPMQWAAVAALR---AP--------ESYYEELKRDYSAKKDILVEGLKEVG-FKVYPSSGTY--- 343 (413)
T ss_pred HHHHHHHhhccCCCCHHHHHHHHHHHh---CC--------HHHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCeeE---
Confidence 999988877789999999999999997 33 57899999999999999999999875 6777888888
Q ss_pred ccccCCCCCceEEeecC--c--cHHHH-HHHHHhCCEEeecCCCCCC----CCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 387 LGRAFEPQPAFAWLKCE--Q--EIEDC-ESFLKGNKILTRSGKHFGF----SPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 387 ~~~~~~~~~~f~~~~~~--~--~~~~~-~~~l~~~gI~v~pg~~fg~----~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
|+|++++ + +...+ ..+++++||.+.||+.|+. +.++|||+|+.+++++++++++|+++++
T Consensus 344 ----------f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 344 ----------FVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKLK 412 (413)
T ss_pred ----------EEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 8999873 2 23344 4555688999999999953 3579999998899999999999998864
No 8
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-45 Score=371.64 Aligned_cols=327 Identities=17% Similarity=0.234 Sum_probs=262.4
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEcc
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGT 170 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~ 170 (456)
.+..+++|+.|+|+...|+....... ..+... ....|++..| .++||++||+|++. +|..+.++++|++|+
T Consensus 31 ~~~~~~~l~~g~p~~~~~~~~~~~~~-~~~~~~--~~~~Y~~~~G-----~~~lR~~ia~~l~~~~~~~~~~~~~I~it~ 102 (403)
T PRK08636 31 AGEDIIDFSMGNPDGPTPQHIIDKLC-ESAQKP--KTHGYSVSKG-----IYKLRLAICNWYKRKYNVDLDPETEVVATM 102 (403)
T ss_pred cCCCEEEcCCcCCCCCCCHHHHHHHH-HHhcCC--ccCCCCCCCC-----CHHHHHHHHHHHHHHhCCCCCCCCeEEECC
Confidence 45678999999999776543333211 111111 2357999899 59999999999965 577765433899999
Q ss_pred CHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc---ccc---------------cCCCeE
Q 012785 171 GSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK---RFN---------------KDGPYI 232 (456)
Q Consensus 171 G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~---~l~---------------~~~~~~ 232 (456)
|+++++.+++++++++|| +|++++|+|+.+...++..|++++.++++.+ +++ ..++++
T Consensus 103 G~~~al~~~~~~l~~~gd----~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~ 178 (403)
T PRK08636 103 GSKEGYVHLVQAITNPGD----VAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKY 178 (403)
T ss_pred ChHHHHHHHHHHhCCCCC----EEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceE
Confidence 999999999999999999 9999999999999999999999988765321 121 135789
Q ss_pred EEEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCCC---CCCCcEEEecCccccCCCCceEE
Q 012785 233 ELVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSITY---PADHDLMLFTVSKSTGHAGTRIG 296 (456)
Q Consensus 233 i~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~~---~~~~~i~i~S~SK~~g~~G~RiG 296 (456)
++++|||||||.+++. +|++++++||+||+|.+..+ .++.. ..+++|+++||||.||+||+|+|
T Consensus 179 i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG 258 (403)
T PRK08636 179 VVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVG 258 (403)
T ss_pred EEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceee
Confidence 9999999999999993 78999999999999985322 22222 23567889999999999999999
Q ss_pred EEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q 012785 297 WALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSV 376 (456)
Q Consensus 297 ~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~ 376 (456)
|++++ +++++.+.+.......+++.+.|.++..+++ +. +++++++++.++++++.+.+.|++.+ +.+
T Consensus 259 ~iv~~-~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~---~~--------~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~ 325 (403)
T PRK08636 259 FVVGN-KKLVGALKKIKSWLDYGMFTPIQVAATIALD---GD--------QSCVEEIRETYRKRRDVLIESFANAG-WEL 325 (403)
T ss_pred eeeCC-HHHHHHHHHHHHHhcccCChHHHHHHHHHHh---Cc--------HHHHHHHHHHHHHHHHHHHHHHHHCC-Ccc
Confidence 99996 9999999988776678888999998887665 22 67899999999999999999999875 667
Q ss_pred cCCCCcccccccccCCCCCceEEeecCc-----cHHHHH-HHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHH
Q 012785 377 PELPSQFCTFLGRAFEPQPAFAWLKCEQ-----EIEDCE-SFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQ 449 (456)
Q Consensus 377 ~~~~g~~~~~~~~~~~~~~~f~~~~~~~-----~~~~~~-~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~ 449 (456)
..|.||+ |+|+++++ +...+. .+++++||.+.||..|+. .++++||+++.++++++++++
T Consensus 326 ~~p~~g~-------------~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~ 392 (403)
T PRK08636 326 QKPRASM-------------FVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAAR 392 (403)
T ss_pred cCCCcce-------------EEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHH
Confidence 7788888 99999974 134444 557789999999999975 468999999888999999999
Q ss_pred HHHhhhC
Q 012785 450 RLSKILS 456 (456)
Q Consensus 450 ~L~~~l~ 456 (456)
+|+++++
T Consensus 393 rl~~~l~ 399 (403)
T PRK08636 393 NIKKFLK 399 (403)
T ss_pred HHHHHHH
Confidence 9998863
No 9
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-45 Score=370.55 Aligned_cols=323 Identities=17% Similarity=0.277 Sum_probs=261.2
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEcc
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGT 170 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~ 170 (456)
.+..+|||+.|+|++++++++.+... ..+... ....|+ +.| .++||++||+|++. +|..+.++++|++|+
T Consensus 30 ~~~~~i~l~~g~p~~~~~~~~~~~~~-~~~~~~--~~~~y~-~~G-----~~~lr~aia~~~~~~~g~~~~~~~~I~it~ 100 (399)
T PRK07681 30 AGHKMIDLSIGNPDMPPADFVREEMV-HTANQK--ESYGYT-LSG-----IQEFHEAVTEYYNNTHNVILNADKEVLLLM 100 (399)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHH-HHHhcc--ccCCCC-CCC-----cHHHHHHHHHHHHHHhCCCCCCCCeEEECC
Confidence 45688999999999877766554322 111111 112254 367 59999999999964 576665337999999
Q ss_pred CHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc--------cccc---CCCeEEEEcCCC
Q 012785 171 GSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK--------RFNK---DGPYIELVTSPN 239 (456)
Q Consensus 171 G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~--------~l~~---~~~~~i~v~~P~ 239 (456)
|+++++.+++.+++++|| +|++++|+|+.|...++..|++++.+++|.+ .++. .++++++++|||
T Consensus 101 G~~~al~~~~~~~~~~Gd----~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~ 176 (399)
T PRK07681 101 GSQDGLVHLPMVYANPGD----IILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPG 176 (399)
T ss_pred CcHHHHHHHHHHhCCCCC----EEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCC
Confidence 999999999999999999 9999999999999999999999998877543 2321 267899999999
Q ss_pred CCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCC---CCCCCcEEEecCccccCCCCceEEEEEEeCH
Q 012785 240 NPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKDM 303 (456)
Q Consensus 240 NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~ 303 (456)
||||.++++ +|++++++||+||+|.+..+ .++. ...+++|+++||||.||+||+|+||++++ +
T Consensus 177 NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~-~ 255 (399)
T PRK07681 177 NPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGN-E 255 (399)
T ss_pred CCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecC-H
Confidence 999999993 68899999999999985322 1221 23468999999999999999999999996 9
Q ss_pred HHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcc
Q 012785 304 EVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQF 383 (456)
Q Consensus 304 ~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~ 383 (456)
++++++.+.+....++++.+.|.++..+|+ ++ ++++++.++.++++++.+.+.|++.+ +.+..|.|++
T Consensus 256 ~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~---~~--------~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~p~~g~ 323 (399)
T PRK07681 256 EIVRALTQFKSNTDYGVFLPIQKAACAALR---NG--------AAFCEKNRGIYQERRDTLVDGFRTFG-WNVDKPAGSM 323 (399)
T ss_pred HHHHHHHHHHhhcccCCCHHHHHHHHHHHh---Cc--------HHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCCeee
Confidence 999999988877788999999999999997 33 57889999999999999999999874 6666677777
Q ss_pred cccccccCCCCCceEEeecCc--cHHHHH-HHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHh
Q 012785 384 CTFLGRAFEPQPAFAWLKCEQ--EIEDCE-SFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSK 453 (456)
Q Consensus 384 ~~~~~~~~~~~~~f~~~~~~~--~~~~~~-~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~ 453 (456)
|+|++++. +...+. .+++++||.++||..|+. +++++||+++.+++++++++++|++
T Consensus 324 -------------f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 324 -------------FVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIRN 384 (399)
T ss_pred -------------EEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 99999964 344444 455559999999999975 4689999998788999999999987
No 10
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-45 Score=371.27 Aligned_cols=326 Identities=14% Similarity=0.221 Sum_probs=262.0
Q ss_pred CCCCeEEecCCCCCC-Cc-hhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEE
Q 012785 92 GGERIINVDHGDPTM-YE-KYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVV 168 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~-~~-~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~ 168 (456)
.+++.|+|+.|+|+. .+ +.+.... ...+... ....|++..| .++||++|++++.. +|..+.++++|++
T Consensus 37 ~~~~~i~l~~g~~~~~~p~~~~~~~~--~~~~~~~--~~~~Y~~~~G-----~~~LR~aia~~l~~~~g~~~~~~~~I~i 107 (405)
T PRK06207 37 LPGRPVDFSHGDVDAHEPTPGAFELF--SAGVERG--GVQAYTEYRG-----DADIRELLAARLAAFTGAPVDAADELII 107 (405)
T ss_pred CCCCceecCCcCCCCCCCCHHHHHHH--HHHHhcC--CCccCCCCCC-----CHHHHHHHHHHHHHHhCCCCCCCCCEEE
Confidence 456789999999883 23 3333321 1112221 1246998888 59999999999965 4766653379999
Q ss_pred ccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC-----------cccccc---CCCeEEE
Q 012785 169 GTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD-----------AKRFNK---DGPYIEL 234 (456)
Q Consensus 169 t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d-----------~~~l~~---~~~~~i~ 234 (456)
|+|+++++.+++.+++++|| +|++++|+|+.+...++..|.+++.+++| .+.++. .++++++
T Consensus 108 t~Ga~~al~~~~~~l~~~Gd----~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~ 183 (405)
T PRK06207 108 TPGTQGALFLAVAATVARGD----KVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFL 183 (405)
T ss_pred eCCcHHHHHHHHHHhcCCCC----EEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEE
Confidence 99999999999999999999 99999999999999999999999877654 233332 3578999
Q ss_pred EcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCC---CCCCCcEEEecCccccCCCCceEEEE
Q 012785 235 VTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSIT---YPADHDLMLFTVSKSTGHAGTRIGWA 298 (456)
Q Consensus 235 v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l 298 (456)
++|||||||.+++. +|++++++||+||+|.+..+ .++. ...+++|+++||||+|++||+|+||+
T Consensus 184 l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~i 263 (405)
T PRK06207 184 FSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVA 263 (405)
T ss_pred ECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEE
Confidence 99999999999982 67889999999999986322 2222 23578999999999999999999999
Q ss_pred EEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccC
Q 012785 299 LVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPE 378 (456)
Q Consensus 299 ~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 378 (456)
+++ +++++++.+.......+.+.+.|.++..+|+ ++ ..++++.++.++++++.+.+.|++++.+.+..
T Consensus 264 i~~-~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~---~~--------~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 331 (405)
T PRK06207 264 FGS-PAIIDRMEKLQAIVSLRAAGYSQAVLRTWFS---EP--------DGWMKDRIARHQAIRDDLLRVLRGVEGVFVRA 331 (405)
T ss_pred EcC-HHHHHHHHHHHhHhccCCCHHHHHHHHHHHh---Cc--------HHHHHHHHHHHHHHHHHHHHHHhcCCCceecC
Confidence 997 9999999998877788889999999999987 32 35677788888999999999998875677777
Q ss_pred CCCcccccccccCCCCCceEEeecCc---cHHHHHHHH-HhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHh
Q 012785 379 LPSQFCTFLGRAFEPQPAFAWLKCEQ---EIEDCESFL-KGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSK 453 (456)
Q Consensus 379 ~~g~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~~l-~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~ 453 (456)
|+|++ |+|++++. +...+.+.+ +++||.+.||+.|+. .++++||+|+.+++++++++++|++
T Consensus 332 p~gg~-------------fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~ 398 (405)
T PRK06207 332 PQAGS-------------YLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQ 398 (405)
T ss_pred CCeeE-------------EEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 88887 99999964 345566655 478999999999974 4789999998888999999999998
Q ss_pred hh
Q 012785 454 IL 455 (456)
Q Consensus 454 ~l 455 (456)
++
T Consensus 399 ~l 400 (405)
T PRK06207 399 LI 400 (405)
T ss_pred HH
Confidence 76
No 11
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-45 Score=369.30 Aligned_cols=322 Identities=17% Similarity=0.229 Sum_probs=263.1
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHH-HhcCccCCCceEEEccCH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHK-VVGNAITENHHIVVGTGS 172 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~I~~t~G~ 172 (456)
+.+|||+.|+|++++++.+.+... ..... ....|+++.| .++||++|++|+. .+|.... +++|++|+|+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~-~~~~~---~~~~Y~~~~G-----~~~lr~~ia~~~~~~~~~~~~-~~~i~it~G~ 98 (384)
T PRK06348 29 PDIIDLSLGDPDLITDESIINAAF-EDAKK---GHTRYTDSGG-----DVELIEEIIKYYSKNYDLSFK-RNEIMATVGA 98 (384)
T ss_pred CCcEEcCCCCCCCCCCHHHHHHHH-HHHhc---CCCCCCCCCC-----cHHHHHHHHHHHHHHhCCCCC-hhhEEEcCCh
Confidence 468999999999876544432211 11111 2357999999 5999999999995 4566665 5799999999
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc--------Ccccccc---CCCeEEEEcCCCCC
Q 012785 173 TQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG--------DAKRFNK---DGPYIELVTSPNNP 241 (456)
Q Consensus 173 ~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~--------d~~~l~~---~~~~~i~v~~P~NP 241 (456)
++++.+++.+++++|| +|++++|+|+.+...++..|.+++.++. |.+.++. .+++++++++||||
T Consensus 99 ~~al~~~~~~~~~~gd----~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NP 174 (384)
T PRK06348 99 CHGMYLALQSILDPGD----EVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNP 174 (384)
T ss_pred HHHHHHHHHHhcCCCC----EEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCC
Confidence 9999999999999999 9999999999999999999999887764 2333332 36789999999999
Q ss_pred CcccchH--------HhhhcCcEEEeeecCCCCCC----CCCC---CCCCCcEEEecCccccCCCCceEEEEEEeCHHHH
Q 012785 242 DGSVRQS--------VVNRSGGILVHDLAYYWPQY----TSIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVA 306 (456)
Q Consensus 242 tG~~~~~--------l~~~~~~~iI~De~y~~~~~----~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~ 306 (456)
||.+++. +|++++++||+||+|.+..+ .++. ...+++|+++||||++|+||+|+||++++ ++++
T Consensus 175 tG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~-~~~~ 253 (384)
T PRK06348 175 TGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAP-DYII 253 (384)
T ss_pred CCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecC-HHHH
Confidence 9999983 68899999999999986322 2222 22578999999999999999999999997 9999
Q ss_pred HHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccccc
Q 012785 307 KKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTF 386 (456)
Q Consensus 307 ~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~ 386 (456)
+.+........++++.+.|.++..+|. +. ++++++.++.+++|++.+.+.|+.++.+++..|+|++
T Consensus 254 ~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~--------~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~--- 319 (384)
T PRK06348 254 ETAKIINEGICFSAPTISQRAAIYALK---HR--------DTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSI--- 319 (384)
T ss_pred HHHHHHHHhccCCCCHHHHHHHHHHHh---Cc--------HHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeE---
Confidence 999988877788999999999999887 22 6788999999999999999999987666777888888
Q ss_pred ccccCCCCCceEEeecCc---cHHHHHHH-HHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhh
Q 012785 387 LGRAFEPQPAFAWLKCEQ---EIEDCESF-LKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKI 454 (456)
Q Consensus 387 ~~~~~~~~~~f~~~~~~~---~~~~~~~~-l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~ 454 (456)
|+|++++. +.+.+.+. ++++||.+.||+.|+. +++++||+++.+++++++++++|+++
T Consensus 320 ----------~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 320 ----------YAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred ----------EEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence 89999862 34555554 5678999999999975 46899999987899999999999875
No 12
>PLN02187 rooty/superroot1
Probab=100.00 E-value=4e-45 Score=373.33 Aligned_cols=328 Identities=17% Similarity=0.229 Sum_probs=257.1
Q ss_pred cCCCCeEEecCCCCC----CCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCce
Q 012785 91 DGGERIINVDHGDPT----MYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHH 165 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~ 165 (456)
..++++|+|++|+|+ +.+++.+.+... .++..+. ...|++..| .++||++||+|++. ++..+. +++
T Consensus 63 ~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~-~~~~~~~--~~~Y~~~~G-----~~~lR~aiA~~~~~~~~~~~~-~~~ 133 (462)
T PLN02187 63 DVNKTILPLGHGDPSVYPCFRTCIEAEDAVV-DVLRSGK--GNSYGPGAG-----ILPARRAVADYMNRDLPHKLT-PED 133 (462)
T ss_pred CCCCCeEECCCCCCCCCCCCCCCHHHHHHHH-HHHhCCC--CCCCCCCCC-----hHHHHHHHHHHHHHhcCCCCC-ccc
Confidence 446789999999998 333433333211 2222221 246888888 59999999999964 465554 679
Q ss_pred EEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc--------Ccccccc---CCCeEEE
Q 012785 166 IVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG--------DAKRFNK---DGPYIEL 234 (456)
Q Consensus 166 I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~--------d~~~l~~---~~~~~i~ 234 (456)
|++|+|++++|.+++.+++++|| +|++++|+|+.|...++..|++++.+++ |.+.++. .++++++
T Consensus 134 I~it~G~~~al~~~~~~l~~pGd----~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~ 209 (462)
T PLN02187 134 IFLTAGCNQGIEIVFESLARPNA----NILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMV 209 (462)
T ss_pred EEEeCCHHHHHHHHHHHhcCCCC----EEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEEE
Confidence 99999999999999999999999 9999999999999999999999886654 3344432 3578999
Q ss_pred EcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCCC--CCCCcEEEecCccccCCCCceEEEEE
Q 012785 235 VTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSITY--PADHDLMLFTVSKSTGHAGTRIGWAL 299 (456)
Q Consensus 235 v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~~--~~~~~i~i~S~SK~~g~~G~RiG~l~ 299 (456)
++|||||||.++++ +|++++++||+||+|.+..+ .++.. ...++|+++||||.|++||+|+||++
T Consensus 210 i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v 289 (462)
T PLN02187 210 VINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIA 289 (462)
T ss_pred EeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEE
Confidence 99999999999983 67889999999999986332 22221 12469999999999999999999999
Q ss_pred EeCHH----HHHHHHHHHhhccC--cCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 012785 300 VKDME----VAKKMTKYIELNTI--GVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGL 373 (456)
Q Consensus 300 ~~~~~----~~~~l~~~~~~~~~--~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~ 373 (456)
+++++ +++.+...+..... +++.+.|.++.++|+ +. .++++++.++.++++++.+.+.|++++.
T Consensus 290 ~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~---~~-------~~~~l~~~~~~l~~~r~~l~~~L~~~~~ 359 (462)
T PLN02187 290 LNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILE---KA-------DKNFFAKKNKILKHNVDLVCDRLKDIPC 359 (462)
T ss_pred ecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHh---cC-------cHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 85443 34566666554444 558999999999997 32 2689999999999999999999998764
Q ss_pred cc-ccCCCCcccccccccCCCCCceEEeecCc--------cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHH
Q 012785 374 FS-VPELPSQFCTFLGRAFEPQPAFAWLKCEQ--------EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENY 444 (456)
Q Consensus 374 ~~-~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--------~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i 444 (456)
.. +..|+|++ |+|++++. +.+.+.++++++||.++||+.|+. +++|||+|+.+++.+
T Consensus 360 ~~~~~~P~gg~-------------fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~-~~~iRis~~~~~e~l 425 (462)
T PLN02187 360 VVCPKKPESCT-------------YLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGL-KNWMRITIGVEAHML 425 (462)
T ss_pred CcCCCCCCEeE-------------EEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCC-CCeEEEEeCCCHHHH
Confidence 43 34566776 89997741 235567788999999999999984 799999998889999
Q ss_pred HHHHHHHHhhh
Q 012785 445 NLFVQRLSKIL 455 (456)
Q Consensus 445 ~~~l~~L~~~l 455 (456)
++++++|++++
T Consensus 426 ~~al~rL~~~l 436 (462)
T PLN02187 426 EDALERLKGFC 436 (462)
T ss_pred HHHHHHHHHHH
Confidence 99999999876
No 13
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=3.5e-45 Score=368.53 Aligned_cols=322 Identities=16% Similarity=0.250 Sum_probs=259.5
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCc--cCCCceEEE
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNA--ITENHHIVV 168 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~--~~~~~~I~~ 168 (456)
.+..+++|+.|+|++.+++.+.+..... ......|+++.| .++||+++|+|+.. +|.. +.++++|++
T Consensus 26 ~~~~~i~l~~~~p~~~~~~~~~~a~~~~-----~~~~~~Y~~~~G-----~~~lr~aia~~~~~~~~~~~~~~~~~~i~i 95 (393)
T TIGR03538 26 ASKPPIALSIGEPKHPTPAFVLEALREN-----LHGLSTYPTTKG-----LPELRQAIARWLERRFDLPTGVDPERHVLP 95 (393)
T ss_pred cCCCeEEecCCCCCCCCCHHHHHHHHHH-----hhccCCCCCCCC-----CHHHHHHHHHHHHHhhCCcccCCCCceEEE
Confidence 4678999999999998777666542211 112356999999 59999999999954 4655 333358999
Q ss_pred ccCHHHHHHHHHHHhcCCCCCCCcE--EEEeCCCCCChhhhhhhcCCeEeeeccCcc--------cccc---CCCeEEEE
Q 012785 169 GTGSTQLFQAALYALSSQDASEPIS--VVSAAPYYSSYPSITDCVKSRLYKWAGDAK--------RFNK---DGPYIELV 235 (456)
Q Consensus 169 t~G~~~al~~~~~~l~~~gd~~~~~--Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~--------~l~~---~~~~~i~v 235 (456)
|+|+++++.+++++++++|| + |++++|+|+.|...++..|++++.++.+.+ .++. .+++++++
T Consensus 96 t~Ga~~al~~~~~~l~~~gd----~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l 171 (393)
T TIGR03538 96 VNGTREALFAFAQAVINPGQ----APLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFV 171 (393)
T ss_pred CCCcHHHHHHHHHHHcCCCC----cceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEE
Confidence 99999999999999999998 5 999999999999999999999988776432 2322 36789999
Q ss_pred cCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCCC------CC----C----CCCCCcEEEecCccccCCCCc
Q 012785 236 TSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQYT------SI----T----YPADHDLMLFTVSKSTGHAGT 293 (456)
Q Consensus 236 ~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~~------~~----~----~~~~~~i~i~S~SK~~g~~G~ 293 (456)
+|||||||.+++. +|++++++||+||+|.+..+. +. . ...+++|+++||||.|++||+
T Consensus 172 ~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~Gl 251 (393)
T TIGR03538 172 CSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGL 251 (393)
T ss_pred eCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCccc
Confidence 9999999999993 678899999999999853221 11 0 124689999999999999999
Q ss_pred eEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 012785 294 RIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGL 373 (456)
Q Consensus 294 RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~ 373 (456)
|+||++++ +++++++.+.......+++.+.|.++.+.+. + ++++++.++.++++++.+.+.|++.
T Consensus 252 RvG~~i~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~---------~~~~~~~~~~~~~~~~~~~~~L~~~-- 316 (393)
T TIGR03538 252 RSGFVAGD-AEILKAFLRYRTYHGCAMPIPTQLASIAAWN---D---------EQHVRENRALYREKFAAVLEILGQV-- 316 (393)
T ss_pred ceEEEecC-HHHHHHHHHHHHhhccCcCHHHHHHHHHHhc---C---------hHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 99999997 8999999888776677889999999888775 1 5688999999999999999999875
Q ss_pred ccccCCCCcccccccccCCCCCceEEeecCccHHHHH-HHHHhCCEEeecCCCCCC-------CCCeEEEEecCChhHHH
Q 012785 374 FSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCE-SFLKGNKILTRSGKHFGF-------SPKYVRISMLDRDENYN 445 (456)
Q Consensus 374 ~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~-~~l~~~gI~v~pg~~fg~-------~~~~iRis~~~~~e~i~ 445 (456)
+.+..|.|++ |+|++++.+...+. .+++++||.+.||+.|+. +.+++||+|+.++++++
T Consensus 317 ~~~~~p~gg~-------------f~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~ 383 (393)
T TIGR03538 317 LDLELPDAGF-------------YLWPKVPGDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECV 383 (393)
T ss_pred CcccCCCeeE-------------EEEEECCCCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCHHHHH
Confidence 4456677777 99999973334444 445679999999999852 25799999988999999
Q ss_pred HHHHHHHhhh
Q 012785 446 LFVQRLSKIL 455 (456)
Q Consensus 446 ~~l~~L~~~l 455 (456)
+++++|++++
T Consensus 384 ~~l~~l~~~~ 393 (393)
T TIGR03538 384 EAAERIRSFI 393 (393)
T ss_pred HHHHHHHHhC
Confidence 9999999864
No 14
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=5.2e-45 Score=368.22 Aligned_cols=326 Identities=17% Similarity=0.255 Sum_probs=263.8
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEcc
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGT 170 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~ 170 (456)
.++++|+|+.|+|++++++....... ..+... ....|+++.| .++||+++|++++. +|....++++|++|+
T Consensus 28 ~~~~~i~l~~~~p~~~~~~~~~~~~~-~~~~~~--~~~~Y~~~~G-----~~~lr~aia~~~~~~~g~~~~~~~~I~it~ 99 (405)
T PRK09148 28 AGADIIDLGMGNPDLPTPQHIVDKLC-ETAQDP--RTHRYSASKG-----IPGLRRAQAAYYARRFGVKLNPDTQVVATL 99 (405)
T ss_pred cCCCeEEcCCCCCCCCCCHHHHHHHH-HHHcCc--ccCCCCCCCC-----CHHHHHHHHHHHHHHhCCCCCCCCcEEEcC
Confidence 56688999999998876654443321 112111 1346999888 59999999999964 477665434899999
Q ss_pred CHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCccc-----ccc------CCCeEEEEcCCC
Q 012785 171 GSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKR-----FNK------DGPYIELVTSPN 239 (456)
Q Consensus 171 G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~-----l~~------~~~~~i~v~~P~ 239 (456)
|++++|.+++.+++.+|| +|++++|+|+.+...++..|++++.++.+.++ ++. .+++++++++||
T Consensus 100 G~~~al~~~~~~l~~~gd----~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~ 175 (405)
T PRK09148 100 GSKEGFANMAQAITAPGD----VILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPS 175 (405)
T ss_pred ChHHHHHHHHHHhcCCCC----EEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCC
Confidence 999999999999999999 99999999999999999999999888765332 111 257899999999
Q ss_pred CCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCC---CCCCCcEEEecCccccCCCCceEEEEEEeCH
Q 012785 240 NPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKDM 303 (456)
Q Consensus 240 NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~ 303 (456)
||||.+++. +|++++++||+||+|.+..+ .++. ...+++|+++||||.+|+||+|+||++++ +
T Consensus 176 NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~-~ 254 (405)
T PRK09148 176 NPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGN-E 254 (405)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCC-H
Confidence 999999993 68899999999999985322 1222 12456889999999999999999999996 9
Q ss_pred HHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcc
Q 012785 304 EVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQF 383 (456)
Q Consensus 304 ~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~ 383 (456)
++++.+.+.+.....+++.+.|.++..+|+ +. ++++++.++.++++++.+.+.|++.+ +.+..|+|++
T Consensus 255 ~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~---~~--------~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~g~ 322 (405)
T PRK09148 255 RLIAALTRVKSYLDYGAFTPIQVAATAALN---GP--------QDCIAEMRELYKKRRDVLVESFGRAG-WDIPPPAASM 322 (405)
T ss_pred HHHHHHHHHHHHhccCCChHHHHHHHHHHh---Cc--------HHHHHHHHHHHHHHHHHHHHHHHHcC-CccCCCCeeE
Confidence 999999998877788899999999999987 32 57899999999999999999999875 5666677777
Q ss_pred cccccccCCCCCceEEeecCcc-----HHHHH-HHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 384 CTFLGRAFEPQPAFAWLKCEQE-----IEDCE-SFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 384 ~~~~~~~~~~~~~f~~~~~~~~-----~~~~~-~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
|+|++++.. ..++. .+++++||.|+||..|+. +++++||+++.+.+++.+++++|++++
T Consensus 323 -------------f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l 388 (405)
T PRK09148 323 -------------FAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFL 388 (405)
T ss_pred -------------EEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 999998641 23444 456689999999999974 468999999878899999999999876
No 15
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-45 Score=366.51 Aligned_cols=317 Identities=17% Similarity=0.233 Sum_probs=255.3
Q ss_pred CCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccC
Q 012785 93 GERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTG 171 (456)
Q Consensus 93 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G 171 (456)
+..+++|+.|+|++++++.+.+... ........|+++.| .++||+++|++++. +|..+. +++|++|+|
T Consensus 23 ~~~~i~l~~~~p~~~~~~~~~~a~~-----~~~~~~~~Y~~~~G-----~~~lr~aia~~l~~~~g~~~~-~~~I~it~G 91 (374)
T PRK05839 23 EYKGLDLTIGEPQFETPKFIQDALK-----NNAHLLNKYPKSAG-----EESLREAQRGFFKRRFKIELK-ENELIPTFG 91 (374)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHH-----HHhhccCCCCCCCC-----CHHHHHHHHHHHHHHhCCCCC-cceEEEecC
Confidence 5589999999999887765554321 11122467999989 59999999999965 476665 589999999
Q ss_pred HHHHHHHHHHHhc--CCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc-ccc-------cCCCeEEEEcCCCCC
Q 012785 172 STQLFQAALYALS--SQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK-RFN-------KDGPYIELVTSPNNP 241 (456)
Q Consensus 172 ~~~al~~~~~~l~--~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~l~-------~~~~~~i~v~~P~NP 241 (456)
+++++..++.+++ ++|| .|++++|+|+.|...++..|++++.++.|.+ ++. ..++++++++|||||
T Consensus 92 ~~~al~~~~~~~~~~~~gd----~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~~~~~k~v~i~nP~NP 167 (374)
T PRK05839 92 TREVLFNFPQFVLFDKQNP----TIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNP 167 (374)
T ss_pred cHHHHHHHHHHHhcCCCCC----EEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhhhccccEEEEeCCCCC
Confidence 9999999988774 4688 9999999999999999999999998887643 221 135789999999999
Q ss_pred CcccchH--------HhhhcCcEEEeeecCCCCC----CCCCC--------CCCCCcEEEecCccccCCCCceEEEEEEe
Q 012785 242 DGSVRQS--------VVNRSGGILVHDLAYYWPQ----YTSIT--------YPADHDLMLFTVSKSTGHAGTRIGWALVK 301 (456)
Q Consensus 242 tG~~~~~--------l~~~~~~~iI~De~y~~~~----~~~~~--------~~~~~~i~i~S~SK~~g~~G~RiG~l~~~ 301 (456)
||.+++. +|+++|++||+||+|.+.. ..++. ...+++|+++||||.|++||+|+||++++
T Consensus 168 TG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~ 247 (374)
T PRK05839 168 TGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD 247 (374)
T ss_pred cCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC
Confidence 9999993 6788999999999998632 11211 12368999999999999999999999996
Q ss_pred CHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCC
Q 012785 302 DMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPS 381 (456)
Q Consensus 302 ~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g 381 (456)
+++++++.+.......+++.+.|.++..++. + ++++++.++.++++++.+.+.|. .. .|+|
T Consensus 248 -~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~---------~~~~~~~~~~~~~~~~~~~~~l~----~~--~p~g 308 (374)
T PRK05839 248 -ASILKKYKAYRTYLGCASPLPLQKAAAVAWL---D---------DEHAEFFRNIYAKNLKLAREILG----IT--IPPA 308 (374)
T ss_pred -HHHHHHHHHHHhhcCCCCChHHHHHHHHHhc---c---------chHHHHHHHHHHHHHHHHHHhcC----CC--CCCe
Confidence 9999999888766677889999999988775 2 46888899999999998887662 22 5667
Q ss_pred cccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCC---CCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 382 QFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGF---SPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 382 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~---~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
++ |+|++++.+.+.+.++++++||.|+||+.|+. .++++||+++.+++++++++++|+++++
T Consensus 309 g~-------------fi~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 309 TF-------------YVWLPVDNDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred eE-------------EEEEeCCChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence 76 99999975555555555679999999998874 3689999998789999999999999874
No 16
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=8e-45 Score=367.13 Aligned_cols=328 Identities=15% Similarity=0.192 Sum_probs=257.0
Q ss_pred hcCCCCeEEecCCCCC----CCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCc
Q 012785 90 QDGGERIINVDHGDPT----MYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENH 164 (456)
Q Consensus 90 ~~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~ 164 (456)
...++++|+|+.|+|+ +++|+.+.+... .++... ....|++..| .++||++||+|+.. +|..+. ++
T Consensus 28 ~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~-~~~~~~--~~~~Y~~~~G-----~~~lr~aia~~~~~~~g~~~~-~~ 98 (409)
T PLN00143 28 EDDHRLAISFGFGDPSCFECFRTTNIAEDAIV-EAVRSA--KFNSYAPTGG-----ILPARRAIADYLSNDLPYQLS-PD 98 (409)
T ss_pred cCCCCceeeCCCCCCCCCCCCCCCHHHHHHHH-HHHhCc--CCCCCCCCCC-----CHHHHHHHHHHHHhhcCCCCC-Hh
Confidence 3456789999999998 787776654322 122222 1346988888 59999999999964 465554 57
Q ss_pred eEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc--------Ccccccc---CCCeEE
Q 012785 165 HIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG--------DAKRFNK---DGPYIE 233 (456)
Q Consensus 165 ~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~--------d~~~l~~---~~~~~i 233 (456)
+|++|+|+++++.+++++++++|| +|++++|+|+.|...++..|.+++.+++ |.+.++. .+++++
T Consensus 99 ~I~it~G~~~al~~~~~~l~~~gd----~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 174 (409)
T PLN00143 99 DVYLTLGCKHAAEIIIKVLARPEA----NILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAM 174 (409)
T ss_pred hEEEecChHHHHHHHHHHHcCCCC----EEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEE
Confidence 999999999999999999999999 9999999999999999999999887765 3334432 356889
Q ss_pred EEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCC--CCCCCcEEEecCccccCCCCceEEEE
Q 012785 234 LVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSIT--YPADHDLMLFTVSKSTGHAGTRIGWA 298 (456)
Q Consensus 234 ~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~--~~~~~~i~i~S~SK~~g~~G~RiG~l 298 (456)
+++|||||||.+++. +|++++++||+||+|.+..+ .++. ...+++|+++||||.|++||+|+||+
T Consensus 175 ~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~ 254 (409)
T PLN00143 175 VIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWL 254 (409)
T ss_pred EEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEE
Confidence 999999999999983 68899999999999986322 2222 23458999999999999999999999
Q ss_pred EEeCH-HH------HHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Q 012785 299 LVKDM-EV------AKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKS 371 (456)
Q Consensus 299 ~~~~~-~~------~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~ 371 (456)
+++++ .+ ++.+.+.... ....+.+.|.++.++|+ ++ .++++++.++.++++++.+.+.|+++
T Consensus 255 v~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~---~~-------~~~~~~~~~~~~~~~~~~~~~~L~~~ 323 (409)
T PLN00143 255 VTCDPSGLLQICEIADSIKKALNP-APFPPTFIQAAIPEILE---KT-------TEDFFSKTINILRAALAFCYDKLKEI 323 (409)
T ss_pred EeeCchhhhhhHHHHHHHHHHHhc-cCCCCchHHHHHHHHHh---cC-------hHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99433 33 3334433322 23358899999999987 32 25788999999999999999999887
Q ss_pred CCcc-ccCCCCcccccccccCCCCCceEEeecCc--------cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChh
Q 012785 372 GLFS-VPELPSQFCTFLGRAFEPQPAFAWLKCEQ--------EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDE 442 (456)
Q Consensus 372 ~~~~-~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--------~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e 442 (456)
+... ...|+|++ |+|++++. +.+.+.++++++||.++||..|+. ++++||+|+.+++
T Consensus 324 ~~~~~~~~p~gg~-------------f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-~~~iRi~~~~~~~ 389 (409)
T PLN00143 324 PCIMCPQKAEGAF-------------FALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGL-KNWLRITFAVEQS 389 (409)
T ss_pred CCCCCCCCCCeeE-------------EEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCC-CCeEEEEEcCCHH
Confidence 5433 34677887 99999862 334556777899999999999975 7899999988899
Q ss_pred HHHHHHHHHHhhh
Q 012785 443 NYNLFVQRLSKIL 455 (456)
Q Consensus 443 ~i~~~l~~L~~~l 455 (456)
++++++++|++++
T Consensus 390 ~l~~al~rl~~~l 402 (409)
T PLN00143 390 SLEDGLGRLKSFC 402 (409)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999876
No 17
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=1.5e-44 Score=362.93 Aligned_cols=326 Identities=20% Similarity=0.251 Sum_probs=263.6
Q ss_pred cCCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEc
Q 012785 91 DGGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVG 169 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t 169 (456)
..++.+++|+.|+|++..++.+.+... ..+... ....|+++.| .++||+++++|++. +|....++++|++|
T Consensus 26 ~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~Y~~~~G-----~~~lr~~ia~~~~~~~~~~~~~~~~vi~t 97 (383)
T TIGR03540 26 AEGVDVISLGIGDPDLPTPKHIVEALC-KAAENP--ENHRYPSYEG-----MLAYRQAVADWYKRRFGVELDPETEVLSL 97 (383)
T ss_pred hcCCCeEEeCCCCCCCCCCHHHHHHHH-HHHhCC--CCCCCCCCCC-----CHHHHHHHHHHHHHhhCCCCCCCCeEEEC
Confidence 456789999999999877665544322 111111 1346999888 59999999999964 56665544479999
Q ss_pred cCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc-cc-------c---cCCCeEEEEcCC
Q 012785 170 TGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK-RF-------N---KDGPYIELVTSP 238 (456)
Q Consensus 170 ~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~l-------~---~~~~~~i~v~~P 238 (456)
+|+++++.+++++++++|| +|++++|+|+.+...++..|++++.++.+.+ ++ + ..++++++++||
T Consensus 98 ~G~~~~l~~~~~~~~~~gd----~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P 173 (383)
T TIGR03540 98 IGSKEGIAHIPLAFVNPGD----IVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYP 173 (383)
T ss_pred CCcHHHHHHHHHHhCCCCC----EEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCC
Confidence 9999999999999999999 9999999999999999999999988877533 22 2 136789999999
Q ss_pred CCCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCCC---CCCCcEEEecCccccCCCCceEEEEEEeC
Q 012785 239 NNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSITY---PADHDLMLFTVSKSTGHAGTRIGWALVKD 302 (456)
Q Consensus 239 ~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~~---~~~~~i~i~S~SK~~g~~G~RiG~l~~~~ 302 (456)
|||||.+++. +|++++++||+||+|.+..+ .++.. ..+++|+++||||.||+||+|+||++++
T Consensus 174 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~- 252 (383)
T TIGR03540 174 NNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGN- 252 (383)
T ss_pred CCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCC-
Confidence 9999999993 68899999999999975322 22221 2367899999999999999999999996
Q ss_pred HHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCc
Q 012785 303 MEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQ 382 (456)
Q Consensus 303 ~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~ 382 (456)
+++++++.........+++.+.|.++.++|. +. ++++++.++.++++++.+.+.|++.+ +.+..+.|+
T Consensus 253 ~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~--------~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~ 320 (383)
T TIGR03540 253 ADLIAGLGKVKTNVDSGVFQAIQYAAIAALN---GP--------QDVVKEIRKIYQRRRDLLLEALKKIG-IDVEKPKAT 320 (383)
T ss_pred HHHHHHHHHHHHhcccCCChHHHHHHHHHHh---CC--------HHHHHHHHHHHHHHHHHHHHHHHhCC-CEecCCCcc
Confidence 9999999888776677889999999999887 33 67899999999999999999999874 667777777
Q ss_pred ccccccccCCCCCceEEeecCc--cHHHHHH-HHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhh
Q 012785 383 FCTFLGRAFEPQPAFAWLKCEQ--EIEDCES-FLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKI 454 (456)
Q Consensus 383 ~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~-~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~ 454 (456)
+ |+|+++++ +...+.+ +++++||.++||+.|+. +++++||+++.+++++++++++|+++
T Consensus 321 ~-------------~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 383 (383)
T TIGR03540 321 F-------------YVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKKL 383 (383)
T ss_pred e-------------EEEEECCCCCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhhC
Confidence 7 89999974 3445554 45789999999999975 46899999988889999999998763
No 18
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=7.3e-45 Score=367.88 Aligned_cols=326 Identities=20% Similarity=0.217 Sum_probs=252.5
Q ss_pred CCCeEEecCCCCCCCchhHhhhcccccccccC--ccccccccCCCCcccCCCHHHHHHHHHHHH-HhcCccCCCceEEEc
Q 012785 93 GERIINVDHGDPTMYEKYWQKVGDKTTIVIPG--WQSLSYFSDVRNLCWFLEPEFAKEVVRLHK-VVGNAITENHHIVVG 169 (456)
Q Consensus 93 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~--~~~~~~y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~I~~t 169 (456)
++.+++|+.|+|++++++.+.+... ..+... ......|++..| .++||++||+|+. .+|..+. +++|++|
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Y~~~~G-----~~~LR~aia~~~~~~~g~~~~-~~~I~it 105 (409)
T PRK07590 33 EAKIIRLGIGDVTQPLPPAVIEAMH-KAVDEMGTAETFRGYGPEQG-----YDFLREKIAENDYQARGCDIS-ADEIFIS 105 (409)
T ss_pred CCceEEecCcCCCCCCCHHHHHHHH-HHHhcccccCCccCCCCCCC-----CHHHHHHHHHHHHHhcCCcCC-hhhEEEC
Confidence 5679999999999887765443322 111111 012346888888 5999999999974 5666665 5799999
Q ss_pred cCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCe-----------EeeeccCcc-ccc----cCCCeEE
Q 012785 170 TGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSR-----------LYKWAGDAK-RFN----KDGPYIE 233 (456)
Q Consensus 170 ~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~-----------~~~~~~d~~-~l~----~~~~~~i 233 (456)
+|+++++.+++ .++.+|| +|++++|+|+.|...++..|.+ ++.+++|.+ ++. ..+++++
T Consensus 106 ~Ga~~al~~l~-~~~~~gd----~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~k~i 180 (409)
T PRK07590 106 DGAKCDTGNIL-DIFGPDN----TIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPEEKVDII 180 (409)
T ss_pred CCHHHHHHHHH-HhcCCCC----EEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcccCceEE
Confidence 99999999875 4568999 9999999999999999999987 888887643 332 2467999
Q ss_pred EEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCCC---CCCCcEEEecCccccCCCCceEEE
Q 012785 234 LVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSITY---PADHDLMLFTVSKSTGHAGTRIGW 297 (456)
Q Consensus 234 ~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~~---~~~~~i~i~S~SK~~g~~G~RiG~ 297 (456)
+++|||||||.+++. +|++++++||+||+|.+..+ .++.. ..+++|+++||||+||+||+|+||
T Consensus 181 ~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~ 260 (409)
T PRK07590 181 YLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAY 260 (409)
T ss_pred EEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEE
Confidence 999999999999993 68899999999999985322 12221 235799999999999999999999
Q ss_pred EEEeCHHHHHHH-----------HHHHhhcc-CcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHH
Q 012785 298 ALVKDMEVAKKM-----------TKYIELNT-IGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLR 365 (456)
Q Consensus 298 l~~~~~~~~~~l-----------~~~~~~~~-~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ 365 (456)
++++ +++++.+ ........ .++|.+.|.++..++. ++ .+++++++++.++++++.+.
T Consensus 261 ~i~~-~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~---~~-------~~~~~~~~~~~~~~~r~~l~ 329 (409)
T PRK07590 261 TVVP-KELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYS---PE-------GKAQIKELIDYYMENAKIIR 329 (409)
T ss_pred EEcC-HHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhc---CC-------cHHHHHHHHHHHHHHHHHHH
Confidence 9997 8887632 11122223 4689999999988886 22 25789999999999999999
Q ss_pred HHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHH-HHHHhCCEEeecCCCCCC-CCCeEEEEecCCh
Q 012785 366 MAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCE-SFLKGNKILTRSGKHFGF-SPKYVRISMLDRD 441 (456)
Q Consensus 366 ~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~-~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~ 441 (456)
+.|++.+ +.+..+.|++ |+|++++. +...+. .+++++||.+.||+.|+. +.+++||++..++
T Consensus 330 ~~L~~~~-~~~~~~~g~~-------------f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~ 395 (409)
T PRK07590 330 EGLESAG-FEVYGGVNAP-------------YIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGSR 395 (409)
T ss_pred HHHHhcC-CceecCCcce-------------EEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCCH
Confidence 9999874 5666666776 99999974 334444 455678999999999975 4679999986789
Q ss_pred hHHHHHHHHHHhhh
Q 012785 442 ENYNLFVQRLSKIL 455 (456)
Q Consensus 442 e~i~~~l~~L~~~l 455 (456)
+++++++++|++++
T Consensus 396 ~~l~~~l~rl~~~~ 409 (409)
T PRK07590 396 ENVLEAMERIKKAL 409 (409)
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999999864
No 19
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.4e-44 Score=366.90 Aligned_cols=325 Identities=15% Similarity=0.230 Sum_probs=256.8
Q ss_pred CCCeEEecCCCCC----CCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEE
Q 012785 93 GERIINVDHGDPT----MYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIV 167 (456)
Q Consensus 93 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~ 167 (456)
+.++|+|++|+|+ +++++.+.+... .++..+. .+.|++..| .++||++++++++. +|.... +++|+
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~-~al~~~~--~~~Y~~~~G-----~~~lr~aia~~~~~~~~~~~~-~~~v~ 121 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVA-AALRSGK--YNSYSTCVG-----LLPARRAIAEYLSRDLPYELS-TDDIY 121 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHH-HHHHcCc--CCCCCCCcc-----CHHHHHHHHHHHhhccCCCCC-hhhEE
Confidence 6689999999996 555554443322 2222221 346898889 59999999999954 455554 57999
Q ss_pred EccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc--------Ccccccc---CCCeEEEEc
Q 012785 168 VGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG--------DAKRFNK---DGPYIELVT 236 (456)
Q Consensus 168 ~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~--------d~~~l~~---~~~~~i~v~ 236 (456)
+|+|++++|++++.++.++|| +|++++|+|+.|...+...|++++.+++ |.+.++. .++++++++
T Consensus 122 it~G~~~al~l~~~~l~~~Gd----~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~ 197 (430)
T PLN00145 122 LTAGCAQAIEIIMSVLAQPGA----NILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVII 197 (430)
T ss_pred EeCCHHHHHHHHHHHhcCCCC----EEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEe
Confidence 999999999999999999999 9999999999999999999998876543 4444432 367899999
Q ss_pred CCCCCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCC--CCCCCcEEEecCccccCCCCceEEEEEEe
Q 012785 237 SPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSIT--YPADHDLMLFTVSKSTGHAGTRIGWALVK 301 (456)
Q Consensus 237 ~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~--~~~~~~i~i~S~SK~~g~~G~RiG~l~~~ 301 (456)
|||||||.+++. +|++++++||+||+|.+..+ .++. ...+++|+++||||.|++||+|+||++++
T Consensus 198 ~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~ 277 (430)
T PLN00145 198 NPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATC 277 (430)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEe
Confidence 999999999982 68889999999999986322 2221 23468999999999999999999999984
Q ss_pred C-HHHH------HHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 012785 302 D-MEVA------KKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLF 374 (456)
Q Consensus 302 ~-~~~~------~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~ 374 (456)
+ +.++ +.+..... ...+++.+.|.++..+|+ +. .++++++.++.++++++.+.+.|++++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~---~~-------~~~~~~~~~~~~~~~~~~~~~~L~~~~g~ 346 (430)
T PLN00145 278 DPNGILKETKVVDSIRNYLN-ISTDPATFVQGAIPQIIA---NT-------KEEFFTKTLGLLKETADICYEKIKEIKCI 346 (430)
T ss_pred cchhhhhhhHHHHHHHHHhc-ccCCCCHHHHHHHHHHHh---cC-------HHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3 3333 23333332 344678899999999997 32 26789999999999999999999988666
Q ss_pred cc-cCCCCcccccccccCCCCCceEEeecCc--------cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHH
Q 012785 375 SV-PELPSQFCTFLGRAFEPQPAFAWLKCEQ--------EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYN 445 (456)
Q Consensus 375 ~~-~~~~g~~~~~~~~~~~~~~~f~~~~~~~--------~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~ 445 (456)
.+ ..|+|++ |+|++++. +.+.+.++++++||.+.||..||. ++|+||+|+.+.+.++
T Consensus 347 ~~~~~P~ga~-------------y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~-~~~lRis~~~~~~~l~ 412 (430)
T PLN00145 347 TCPHKPEGSM-------------FVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGM-KNWLRITFAIDPPSLE 412 (430)
T ss_pred CCCcCCCeee-------------EEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCC-CCeEEEEeCCCHHHHH
Confidence 65 4688888 99998852 234566788899999999999985 7999999988889999
Q ss_pred HHHHHHHhhh
Q 012785 446 LFVQRLSKIL 455 (456)
Q Consensus 446 ~~l~~L~~~l 455 (456)
+++++|++++
T Consensus 413 ~al~rl~~~~ 422 (430)
T PLN00145 413 DGLERLKSFC 422 (430)
T ss_pred HHHHHHHHHH
Confidence 9999999876
No 20
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.9e-44 Score=362.65 Aligned_cols=325 Identities=20% Similarity=0.272 Sum_probs=262.0
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEcc
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGT 170 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~ 170 (456)
.+.++|+|+.|+|+++.++.+.+... ..+... ....|++..| .++||+++|+|++. +|..+.++++|++|+
T Consensus 30 ~~~~~i~l~~~~p~~~~~~~~~~~~~-~~~~~~--~~~~Y~~~~g-----~~~lr~aia~~~~~~~g~~~~~~~~i~it~ 101 (389)
T PRK08068 30 EGHDVINLGQGNPDQPTPEHIVEALQ-EAAENP--ANHKYSPFRG-----YPFLKEAAADFYKREYGVTLDPETEVAILF 101 (389)
T ss_pred cCCCeEEecCCCCCCCCCHHHHHHHH-HHHhCC--CCCCCCCCCC-----CHHHHHHHHHHHHHHhCCCCCCCccEEEcC
Confidence 45678999999999876655543221 112221 1346988888 59999999999964 566665433899999
Q ss_pred CHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc-cc-------cc---CCCeEEEEcCCC
Q 012785 171 GSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK-RF-------NK---DGPYIELVTSPN 239 (456)
Q Consensus 171 G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~l-------~~---~~~~~i~v~~P~ 239 (456)
|+++++..++.+++.+|| +|++++|+|+.|...++..|++++.++.|.+ ++ +. .++++++++|||
T Consensus 102 G~~~~l~~~~~~~~~~gd----~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~ 177 (389)
T PRK08068 102 GGKAGLVELPQCLMNPGD----TILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPN 177 (389)
T ss_pred CcHHHHHHHHHHhCCCCC----EEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCC
Confidence 999999999999999999 9999999999999999999999988877542 22 21 367899999999
Q ss_pred CCCcccchH--------HhhhcCcEEEeeecCCCCCCC-----CCC---CCCCCcEEEecCccccCCCCceEEEEEEeCH
Q 012785 240 NPDGSVRQS--------VVNRSGGILVHDLAYYWPQYT-----SIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKDM 303 (456)
Q Consensus 240 NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~~-----~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~ 303 (456)
||||.+++. +|++++++||+||+|.+..+. +.. ...+++|+++||||.||+||+|+||++++ +
T Consensus 178 NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~-~ 256 (389)
T PRK08068 178 NPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGN-E 256 (389)
T ss_pred CCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecC-H
Confidence 999999993 788999999999999753221 211 23457899999999999999999999996 9
Q ss_pred HHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcc
Q 012785 304 EVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQF 383 (456)
Q Consensus 304 ~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~ 383 (456)
++++.+.+.......+.+++.|.++..+|. ++ .+++++.++.++++++.+.+.|++++ +.+.+|.|++
T Consensus 257 ~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~---~~--------~~~~~~~~~~~~~~r~~~~~~L~~~g-~~~~~~~g~~ 324 (389)
T PRK08068 257 SVIEAINLLQDHLFVSLFGAIQDAAIEALL---SD--------QSCVAELVARYESRRNAFISACREIG-WEVDAPKGSF 324 (389)
T ss_pred HHHHHHHHHHhhccCCCChHHHHHHHHHHh---Cc--------HHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCCeeE
Confidence 999999988776667777788998888886 33 57899999999999999999999875 6677778887
Q ss_pred cccccccCCCCCceEEeecCc--cHHHHHHHHH-hCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhh
Q 012785 384 CTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLK-GNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKI 454 (456)
Q Consensus 384 ~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~-~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~ 454 (456)
|+|+++++ +.+.+.+.+. ++||.|+||..|+. +++++||+++.+++.+.+++++|+++
T Consensus 325 -------------~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 325 -------------FAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLREAVERIGKL 386 (389)
T ss_pred -------------EEEEECCCCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcCCHHHHHHHHHHHHHh
Confidence 89999964 4566666665 57999999999974 46899999987888999999999875
No 21
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=9.9e-45 Score=368.72 Aligned_cols=328 Identities=17% Similarity=0.192 Sum_probs=254.6
Q ss_pred cCCCCeEEecCCCC---CCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceE
Q 012785 91 DGGERIINVDHGDP---TMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHI 166 (456)
Q Consensus 91 ~~~~~~i~l~~g~p---~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I 166 (456)
..+.++++|+.|+| ++.+|+++.+.... .+... ....|++..| .++||+++++|++. +|..+. +++|
T Consensus 29 ~~g~~~~~~~~G~p~~~~~~~p~~~~~a~~~-~~~~~--~~~~Y~~~~G-----~~~LReaia~~~~~~~g~~~~-~~~I 99 (433)
T PRK06855 29 KLGVKITWENIGDPIAKGEKIPDWMKEIVAE-LVMDD--KSYGYCPTKG-----VLETREFLAELNNKRGGAQIT-PDDI 99 (433)
T ss_pred hccccccccccCCCcccCCCCCHHHHHHHHH-HhhcC--CCCCCCCCCC-----CHHHHHHHHHHHHhccCCCCC-HhHE
Confidence 34567899999999 57878777654221 12221 2346888899 59999999999965 466665 5799
Q ss_pred EEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhh-hhcCCeEeeeccC--------cccccc-----CCCeE
Q 012785 167 VVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSIT-DCVKSRLYKWAGD--------AKRFNK-----DGPYI 232 (456)
Q Consensus 167 ~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~-~~~g~~~~~~~~d--------~~~l~~-----~~~~~ 232 (456)
++|+|++++|.+++. ++.+|| .|++++|+|+.|.... ...|.+++.+++| .+.++. .++++
T Consensus 100 ~it~G~~~al~~~~~-l~~~Gd----~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~ 174 (433)
T PRK06855 100 IFFNGLGDAIAKIYG-LLRREA----RVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAG 174 (433)
T ss_pred EEcCcHHHHHHHHHH-hcCCCC----eEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceE
Confidence 999999999999985 788999 9999999999987543 3458877766544 333432 24688
Q ss_pred EEEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCCC-CC-CCcEEEecCccccCCCCceEEE
Q 012785 233 ELVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSITY-PA-DHDLMLFTVSKSTGHAGTRIGW 297 (456)
Q Consensus 233 i~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~~-~~-~~~i~i~S~SK~~g~~G~RiG~ 297 (456)
++++|||||||.+++. +|++++++||+||+|.+..+ .++.. .. +++|+++||||.+++||+|+||
T Consensus 175 i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ 254 (433)
T PRK06855 175 ILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGW 254 (433)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEE
Confidence 9999999999999993 68899999999999986433 22211 12 3689999999999999999999
Q ss_pred EEEeC----H---HHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 012785 298 ALVKD----M---EVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQK 370 (456)
Q Consensus 298 l~~~~----~---~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~ 370 (456)
+++++ + ++.+.+..... ...+++.+.|.++..+|+ ++ ..+++++++++.+++|++.+.+.|++
T Consensus 255 ii~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~---~~------~~~~~~~~~~~~~~~r~~~~~~~L~~ 324 (433)
T PRK06855 255 IEVYNADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMS---HP------EYKNYLKERNKRYEKRSNIAYEKLKD 324 (433)
T ss_pred EEEeCCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhc---CC------cHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99842 2 23333333332 345788999999999997 33 23789999999999999999999988
Q ss_pred cCCccccCCCCcccccccccCCCCCceEEeecCc------------------------------cHHHHHHHHHhCCEEe
Q 012785 371 SGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ------------------------------EIEDCESFLKGNKILT 420 (456)
Q Consensus 371 ~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~------------------------------~~~~~~~~l~~~gI~v 420 (456)
.+++.+..|+|+| |+|+++++ +.+.+..+++++||.+
T Consensus 325 ~~~~~~~~p~gg~-------------~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v 391 (433)
T PRK06855 325 VPGLKVNRTNGAF-------------YMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICV 391 (433)
T ss_pred CCCeeccCCCeeE-------------EEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEE
Confidence 7557788899998 99999963 2244556788999999
Q ss_pred ecCCCCCCCCCeEEEEecC-ChhHHHHHHHHHHhhh
Q 012785 421 RSGKHFGFSPKYVRISMLD-RDENYNLFVQRLSKIL 455 (456)
Q Consensus 421 ~pg~~fg~~~~~iRis~~~-~~e~i~~~l~~L~~~l 455 (456)
.||+.|+...+++||+|+. +++++++++++|++++
T Consensus 392 ~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~~~~ 427 (433)
T PRK06855 392 VPLSSFCTELNGFRVTLLERDEEKFEWIYQTLAEKI 427 (433)
T ss_pred ecCCcCCCCCCceEEEECCCcHHHHHHHHHHHHHHH
Confidence 9999998655679999996 8999999999999876
No 22
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-44 Score=361.79 Aligned_cols=325 Identities=21% Similarity=0.257 Sum_probs=261.0
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEcc
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGT 170 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~ 170 (456)
.+.++++|+.|+|++++++.+.+... ..+... ....|++..| .++||+++++|++. +|....++++|++|+
T Consensus 29 ~~~~~i~l~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~Y~~~~G-----~~~lr~aia~~~~~~~g~~~~~~~~ii~t~ 100 (385)
T PRK09276 29 RGVDVISLGIGDPDLPTPDHIIEAMC-KAVEDP--ENHQYPSYEG-----MLEFRKAVADWYKRRFGVELDPETEVISLI 100 (385)
T ss_pred cCCCEEEecCCCCCCCCCHHHHHHHH-HHHhCC--CCCCCCCCCC-----cHHHHHHHHHHHHHHhCCCCCCCCcEEEcc
Confidence 45678999999999877665544322 111111 1346999888 59999999999965 466565444699999
Q ss_pred CHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc-c-------ccc---CCCeEEEEcCCC
Q 012785 171 GSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK-R-------FNK---DGPYIELVTSPN 239 (456)
Q Consensus 171 G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~-------l~~---~~~~~i~v~~P~ 239 (456)
|+++++..++.+++++|| +|++++|+|+.|...++..|.+++.++.+.+ + ++. .++++++++|||
T Consensus 101 G~~~~i~~~~~~~~~~gd----~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~ 176 (385)
T PRK09276 101 GSKEGIAHIPLAFVNPGD----VVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPN 176 (385)
T ss_pred CcHHHHHHHHHHhCCCCC----EEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCC
Confidence 999999999999999999 9999999999999999999999987776432 2 221 267899999999
Q ss_pred CCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCC---CCCCCcEEEecCccccCCCCceEEEEEEeCH
Q 012785 240 NPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKDM 303 (456)
Q Consensus 240 NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~ 303 (456)
||||.+++. +|++++++||+||+|.+..+ .++. ...+++|+++||||.||+||+|+||++++ +
T Consensus 177 NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~-~ 255 (385)
T PRK09276 177 NPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGN-A 255 (385)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCC-H
Confidence 999999983 67889999999999985322 2222 12457899999999999999999999996 9
Q ss_pred HHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcc
Q 012785 304 EVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQF 383 (456)
Q Consensus 304 ~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~ 383 (456)
++++.+.+.+.....+++.+.|.++..+|. +. ++++++.++.++++++.+.+.|++.+ +.+..|.|++
T Consensus 256 ~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~--------~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~ 323 (385)
T PRK09276 256 DLIAGLGKVKSNVDSGVFQAIQEAGIAALN---GP--------QEVVEELRKIYQERRDILVEGLRKLG-LEVEPPKATF 323 (385)
T ss_pred HHHHHHHHHHhhccCCCCHHHHHHHHHHHc---Cc--------HHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCcce
Confidence 999999988776677788899999999886 22 67899999999999999999999874 6666777777
Q ss_pred cccccccCCCCCceEEeecCc--cHHHHHH-HHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhh
Q 012785 384 CTFLGRAFEPQPAFAWLKCEQ--EIEDCES-FLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKI 454 (456)
Q Consensus 384 ~~~~~~~~~~~~~f~~~~~~~--~~~~~~~-~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~ 454 (456)
|+|+++++ +...+.+ +++++||.++||..|+. +++++||+++.+++++.+++++|+++
T Consensus 324 -------------~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 385 (385)
T PRK09276 324 -------------YVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKKL 385 (385)
T ss_pred -------------EEEEECCCCCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhhC
Confidence 89999974 3445544 45678999999999975 46799999988889999999998763
No 23
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=2.3e-44 Score=364.01 Aligned_cols=328 Identities=16% Similarity=0.238 Sum_probs=263.3
Q ss_pred hcCCCCeEEecCCCCC----CCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCc
Q 012785 90 QDGGERIINVDHGDPT----MYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENH 164 (456)
Q Consensus 90 ~~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~ 164 (456)
...++++|+|+.|+|+ +++++.+.+... .++.... ...|++..| .++||++++++++. +|..+. ++
T Consensus 27 ~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~-~~~~~~~--~~~Y~~~~G-----~~~lr~~ia~~~~~~~g~~~~-~~ 97 (409)
T PLN02656 27 EENGKRVISLGMGDPTAYSCFHTTHVAQEAVV-DALQSNK--FNGYAPTVG-----LPQARRAIAEYLSRDLPYKLS-LD 97 (409)
T ss_pred cccCCeeeecCCCCCCcCCCCCCCHHHHHHHH-HHHhcCC--CCCCCCCCC-----CHHHHHHHHHHHHHhcCCCCC-cc
Confidence 3467899999999998 676665554322 2222221 346988888 59999999999965 465554 57
Q ss_pred eEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC--------cccccc---CCCeEE
Q 012785 165 HIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD--------AKRFNK---DGPYIE 233 (456)
Q Consensus 165 ~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d--------~~~l~~---~~~~~i 233 (456)
+|++|+|+++++.+++.+++++|| +|++++|+|+.+...++..|++++.++++ .+.++. .+++++
T Consensus 98 ~i~~t~G~~~al~~~~~~l~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v 173 (409)
T PLN02656 98 DVFITSGCTQAIDVALSMLARPGA----NILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVAL 173 (409)
T ss_pred cEEEeCChHHHHHHHHHHHhCCCC----eEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEE
Confidence 999999999999999999999999 99999999999999999999998877653 223322 357889
Q ss_pred EEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCC--CCCCCcEEEecCccccCCCCceEEEE
Q 012785 234 LVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSIT--YPADHDLMLFTVSKSTGHAGTRIGWA 298 (456)
Q Consensus 234 ~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~--~~~~~~i~i~S~SK~~g~~G~RiG~l 298 (456)
++++||||||.+++. +|++++++||+||+|.+..+ .++. ...+++|+++||||+|++||+|+||+
T Consensus 174 ~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~ 253 (409)
T PLN02656 174 VIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWF 253 (409)
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEE
Confidence 999999999999872 68889999999999986432 2221 23468999999999999999999999
Q ss_pred EEeC-------HHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Q 012785 299 LVKD-------MEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKS 371 (456)
Q Consensus 299 ~~~~-------~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~ 371 (456)
++++ +++++++.+.... ..+++.+.|.++..+|+ ++ .++++++.++.++++++.+.+.|+.+
T Consensus 254 i~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~---~~-------~~~~~~~~~~~~~~~r~~~~~~L~~~ 322 (409)
T PLN02656 254 VTTDPSGSFRDPKIVERIKKYFDI-LGGPATFIQAAVPTILE---QT-------DESFFKKTINILKQSSDICCDRIKEI 322 (409)
T ss_pred EEeCcccccccHHHHHHHHHHHhh-hcCCCHHHHHHHHHHHh---cC-------cHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9952 5788888877553 35789999999999997 32 25789999999999999999999987
Q ss_pred CCcc-ccCCCCcccccccccCCCCCceEEeecCc--------cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChh
Q 012785 372 GLFS-VPELPSQFCTFLGRAFEPQPAFAWLKCEQ--------EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDE 442 (456)
Q Consensus 372 ~~~~-~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--------~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e 442 (456)
+.+. +.+|.|++ |+|++++. +.+.+.++++++||.+.||+.|+. ++++||+|+.+++
T Consensus 323 ~~~~~~~~p~gg~-------------~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~-~~~iRi~~~~~~e 388 (409)
T PLN02656 323 PCITCPHKPEGSM-------------AVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGL-KNWLRITFAADPS 388 (409)
T ss_pred CCCcCCcCCCeEE-------------EEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCC-CCeEEEEeCCCHH
Confidence 5443 35678888 99999851 224567888999999999999975 7899999988999
Q ss_pred HHHHHHHHHHhhh
Q 012785 443 NYNLFVQRLSKIL 455 (456)
Q Consensus 443 ~i~~~l~~L~~~l 455 (456)
++++++++|++++
T Consensus 389 ~l~eal~rl~~~~ 401 (409)
T PLN02656 389 SLEEALGRIKSFY 401 (409)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999876
No 24
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.5e-45 Score=338.00 Aligned_cols=359 Identities=16% Similarity=0.244 Sum_probs=288.3
Q ss_pred CCchhhHHHHhhhhhccccCCCceeecccccccccCCCCCCccccccccchhhhcCCCCeEEecCCCCCCCchh---Hhh
Q 012785 37 FDSSFSLQQQRRSVMAGCVLKEKEHVSERTHLSLSSSPSPSPSSSLTSTDIQSQDGGERIINVDHGDPTMYEKY---WQK 113 (456)
Q Consensus 37 ~w~~~~~~~~~~~~~~~c~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~---~~~ 113 (456)
.|+......|+++++++- |.|++ .+...|....++.+|.|++|||...+.. ...
T Consensus 27 ~W~f~gs~~a~ka~~~ti----r~i~~-------------------~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a 83 (447)
T KOG0259|consen 27 VWRFKGSDAAKKAASVTI----RGILS-------------------ALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEA 83 (447)
T ss_pred ceeeccchhhhhhccccH----HHHHH-------------------HHhhcCCcccCceeccCCCCCCCccccccCCHHH
Confidence 399988887777766655 33666 1222223445568999999999854321 112
Q ss_pred hcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCc
Q 012785 114 VGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPI 192 (456)
Q Consensus 114 ~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~ 192 (456)
+++...++.++- .+.|.+..|+ +..|+++|+|+.+ ..+..+ +++|++|+|-.|||++++.+|.+||.
T Consensus 84 ~~Av~~al~Sgk--~N~Yaps~G~-----~~AR~AVAeYl~~~l~~kl~-a~DV~ltsGC~qAIe~~i~~LA~p~a---- 151 (447)
T KOG0259|consen 84 EQAVVDALRSGK--GNGYAPSVGI-----LPARRAVAEYLNRDLPNKLT-ADDVVLTSGCSQAIELAISSLANPGA---- 151 (447)
T ss_pred HHHHHHHHhcCC--CCCcCCcccc-----HHHHHHHHHHhhcCCCCccC-cCceEEeccchHHHHHHHHHhcCCCC----
Confidence 222223344443 4579999995 9999999999743 455555 57999999999999999999999999
Q ss_pred EEEEeCCCCCChhhhhhhcCCeEee--------eccCcccccc---CCCeEEEEcCCCCCCcccchH--------Hhhhc
Q 012785 193 SVVSAAPYYSSYPSITDCVKSRLYK--------WAGDAKRFNK---DGPYIELVTSPNNPDGSVRQS--------VVNRS 253 (456)
Q Consensus 193 ~Vlv~~P~y~~~~~~~~~~g~~~~~--------~~~d~~~l~~---~~~~~i~v~~P~NPtG~~~~~--------l~~~~ 253 (456)
+|++|.|+|+.|...+...|+++.. |++|+++++. +++.++++.||+||+|.++++ +|+++
T Consensus 152 NILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~kl 231 (447)
T KOG0259|consen 152 NILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKL 231 (447)
T ss_pred ceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHh
Confidence 9999999999999999999998874 5567766653 588999999999999999994 78999
Q ss_pred CcEEEeeecCCCC-----CCCCCCCC--CCCcEEEecCccccCCCCceEEEEEEeCH-------HHHHHHHHHHhhccCc
Q 012785 254 GGILVHDLAYYWP-----QYTSITYP--ADHDLMLFTVSKSTGHAGTRIGWALVKDM-------EVAKKMTKYIELNTIG 319 (456)
Q Consensus 254 ~~~iI~De~y~~~-----~~~~~~~~--~~~~i~i~S~SK~~g~~G~RiG~l~~~~~-------~~~~~l~~~~~~~~~~ 319 (456)
+++||.||+|.+. .|.|+... .-.+|.++|+||.|-.||||+||++..|+ .+.+.+.+... .+.+
T Consensus 232 gi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~-~~~~ 310 (447)
T KOG0259|consen 232 GIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLD-IIPG 310 (447)
T ss_pred CCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHHHHHHHHHHh-ccCC
Confidence 9999999999863 34444322 23589999999999999999999999863 44566666644 5789
Q ss_pred CChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCcc-ccCCCCcccccccccCCCCCceE
Q 012785 320 VSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFS-VPELPSQFCTFLGRAFEPQPAFA 398 (456)
Q Consensus 320 ~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~g~~~~~~~~~~~~~~~f~ 398 (456)
++.+.|.|...+|+. . .+++++.....++.+.++.++.|++++.+. ..+|+|.+ |+
T Consensus 311 p~TiiQ~AlP~IL~k---T-------p~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~m-------------yl 367 (447)
T KOG0259|consen 311 PATIIQGALPDILEK---T-------PEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCM-------------YL 367 (447)
T ss_pred ccHhHHHHhHHHHHh---C-------hHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcce-------------EE
Confidence 999999999999983 3 489999999999999999999999999887 56788877 89
Q ss_pred EeecC--------ccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 399 WLKCE--------QEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 399 ~~~~~--------~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
|++++ ++.++|.++.+|+.+.+.||..||. ++|+|++++.+.+.++++++||+++.
T Consensus 368 mv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~-~nw~Ri~i~~~~~~leea~~Rik~Fc 431 (447)
T KOG0259|consen 368 MVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGL-KNWLRIVITVEEEMLEEAFSRIKEFC 431 (447)
T ss_pred EeccchhhhccccccHHHHHHHhhhcceEEeccccccC-CCeEEEEEccChHHHHHHHHHHHHHH
Confidence 99875 3578899999999999999999997 99999999889999999999999875
No 25
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=3.2e-44 Score=360.19 Aligned_cols=323 Identities=15% Similarity=0.200 Sum_probs=261.6
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEcc
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGT 170 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~ 170 (456)
...++|+|+.|+|++++++.+.+... ..+... ...|++..| .++||+++++++.. +|...+++++|++|+
T Consensus 27 ~~~~~i~l~~g~p~~~~~~~~~~~~~-~~~~~~---~~~Y~~~~G-----~~~lr~~ia~~l~~~~g~~~~~~~~i~it~ 97 (384)
T PRK12414 27 AQHDALNLSQGAPNFAPDPALVEGVA-RAMRDG---HNQYAPMAG-----IAALREALAEKTERLYGARYDPASEVTVIA 97 (384)
T ss_pred HhCCeEEcCCCCCCCCCCHHHHHHHH-HHHHhC---CCCcCCCCC-----cHHHHHHHHHHHHHHhCCCCCCCCcEEEEC
Confidence 34578999999999876655554322 112222 246988889 59999999999965 576655446899999
Q ss_pred CHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc-------cccc---CCCeEEEEcCCCC
Q 012785 171 GSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK-------RFNK---DGPYIELVTSPNN 240 (456)
Q Consensus 171 G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-------~l~~---~~~~~i~v~~P~N 240 (456)
|+++++.+++++++.+|| +|++++|+|..+...++..|.+++.+++|.+ .++. .++++++++||||
T Consensus 98 g~~~al~~~~~~l~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~N 173 (384)
T PRK12414 98 SASEGLYAAISALVHPGD----EVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHN 173 (384)
T ss_pred ChHHHHHHHHHHhcCCCC----EEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCC
Confidence 999999999999999999 9999999999999999999999988776532 2322 3678999999999
Q ss_pred CCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCC---CCCCCcEEEecCccccCCCCceEEEEEEeCHH
Q 012785 241 PDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKDME 304 (456)
Q Consensus 241 PtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~ 304 (456)
|||.++++ +|+++++++|+||+|.+..+ .++. ...+++|+++||||.||+||+|+||++++ ++
T Consensus 174 PTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~-~~ 252 (384)
T PRK12414 174 PSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAP-AE 252 (384)
T ss_pred CCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecC-HH
Confidence 99999872 67889999999999985322 1222 22468999999999999999999999997 89
Q ss_pred HHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccc
Q 012785 305 VAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFC 384 (456)
Q Consensus 305 ~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~ 384 (456)
+++.+.+......++++.+.|.++..+|+ ++ .+..+.++.++++++.+.+.|++.+ +.+.++.|+|
T Consensus 253 l~~~l~~~~~~~~~~~s~~~q~a~~~~l~---~~---------~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~gg~- 318 (384)
T PRK12414 253 LMDEIRKVHQFMVFSADTPMQHAFAEALA---EP---------ASYLGLGAFYQRKRDLLARELAGSR-FELLPSEGSF- 318 (384)
T ss_pred HHHHHHHHHhheecCCCcHHHHHHHHHhc---CC---------hHHHHHHHHHHHHHHHHHHHHHhCC-CeecCCCcce-
Confidence 99999998877788999999999999887 33 2344678899999999999999875 6777788888
Q ss_pred ccccccCCCCCceEEeecCc-----cHHHHHHHHHhCCEEeecCCCCCC---CCCeEEEEecCChhHHHHHHHHHHhh
Q 012785 385 TFLGRAFEPQPAFAWLKCEQ-----EIEDCESFLKGNKILTRSGKHFGF---SPKYVRISMLDRDENYNLFVQRLSKI 454 (456)
Q Consensus 385 ~~~~~~~~~~~~f~~~~~~~-----~~~~~~~~l~~~gI~v~pg~~fg~---~~~~iRis~~~~~e~i~~~l~~L~~~ 454 (456)
|+|++++. +.+.+.++++++||.+.||+.|+. ..+++||+++.+++++++++++|.++
T Consensus 319 ------------~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~~ 384 (384)
T PRK12414 319 ------------FMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCSL 384 (384)
T ss_pred ------------EEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhhC
Confidence 89988752 345566788899999999999963 26799999988899999999999863
No 26
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=5e-44 Score=359.43 Aligned_cols=328 Identities=19% Similarity=0.254 Sum_probs=263.4
Q ss_pred cCCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEc
Q 012785 91 DGGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVG 169 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t 169 (456)
..++++++|+.|+|++++++.+.+... ..+..+ ...|++..| .++||+++|++++. +|.... +++|++|
T Consensus 29 ~~~~~~i~l~~g~~~~~~~~~v~~a~~-~~~~~~---~~~Y~~~~g-----~~~lr~~ia~~~~~~~g~~~~-~~~i~it 98 (387)
T PRK08960 29 AAGHDVIHLEIGEPDFTTAEPIVAAGQ-AALAAG---HTRYTAARG-----LPALREAIAGFYAQRYGVDVD-PERILVT 98 (387)
T ss_pred hcCCCeEEeCCCCCCCCCCHHHHHHHH-HHHhcC---CCccCCCCC-----CHHHHHHHHHHHHHHhCCCCC-hhhEEEc
Confidence 345678999999999876655554322 112222 235777788 59999999999964 566665 5799999
Q ss_pred cCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc--------cccc---CCCeEEEEcCC
Q 012785 170 TGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK--------RFNK---DGPYIELVTSP 238 (456)
Q Consensus 170 ~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~--------~l~~---~~~~~i~v~~P 238 (456)
+|++++|++++.+++.+|| +|++++|+|+.+...++..|.+++.+++|.+ .++. .+++++++++|
T Consensus 99 ~G~~~al~~~~~~~~~~gd----~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p 174 (387)
T PRK08960 99 PGGSGALLLASSLLVDPGK----HWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASP 174 (387)
T ss_pred cCcHHHHHHHHHHhcCCCC----EEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECC
Confidence 9999999999999999999 9999999999999999999999887765543 2322 25678899999
Q ss_pred CCCCcccchH--------HhhhcCcEEEeeecCCCCCC----CCCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHH
Q 012785 239 NNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY----TSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVA 306 (456)
Q Consensus 239 ~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~----~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~ 306 (456)
|||||.+++. +|+++++++|+||+|.+..+ .++....+++|+++||||.||++|+|+||++++ ++++
T Consensus 175 ~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~-~~~~ 253 (387)
T PRK08960 175 ANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAP-PAAV 253 (387)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEcC-HHHH
Confidence 9999999982 67889999999999986322 233344578999999999999999999999997 8999
Q ss_pred HHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccccc
Q 012785 307 KKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTF 386 (456)
Q Consensus 307 ~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~ 386 (456)
+++.+.......++|.+.|.++..+|. +. .++++++.++.++++++.+.+.|++++...+..|.|++
T Consensus 254 ~~~~~~~~~~~~~~s~~~q~a~~~~l~---~~-------~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~--- 320 (387)
T PRK08960 254 PELEKLAQNLYISASTPAQHAALACFE---PE-------TLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAF--- 320 (387)
T ss_pred HHHHHHHhhhccCCCHHHHHHHHHHhh---cC-------cHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeE---
Confidence 999988877788899999999999886 22 26789999999999999999999987532234567777
Q ss_pred ccccCCCCCceEEeecCc---cHHHHH-HHHHhCCEEeecCCCCCC--CCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 387 LGRAFEPQPAFAWLKCEQ---EIEDCE-SFLKGNKILTRSGKHFGF--SPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 387 ~~~~~~~~~~f~~~~~~~---~~~~~~-~~l~~~gI~v~pg~~fg~--~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
|+|++++. +...+. ++++++||.+.||+.|+. .++++||+++.+.+++.+++++|++++.
T Consensus 321 ----------f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 321 ----------YLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARGLR 386 (387)
T ss_pred ----------EEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 99999863 344455 456689999999999974 3579999998888999999999998763
No 27
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.5e-44 Score=360.51 Aligned_cols=326 Identities=17% Similarity=0.244 Sum_probs=261.3
Q ss_pred cCCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEc
Q 012785 91 DGGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVG 169 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t 169 (456)
..++++|+|+.|+|+.++|........ ..+... ....|+++.| .++||+++|+|++. +|....++++|++|
T Consensus 32 ~~g~~~i~l~~g~p~~~~p~~~~~~~~-~~~~~~--~~~~Y~~~~G-----~~~lr~aia~~~~~~~~~~~~~~~~i~vt 103 (394)
T PRK05942 32 EQGLDLIDLGMGNPDGAAPQPVIEAAI-AALADP--QNHGYPPFEG-----TASFRQAITDWYHRRYGVELDPDSEALPL 103 (394)
T ss_pred hcCCCeEEcCCCCCCCCCCHHHHHHHH-HHHhCC--CCccCCCCCC-----CHHHHHHHHHHHHHHHCCCcCCCCeEEEc
Confidence 356678999999998875543333211 112221 1346999999 59999999999965 46666543369999
Q ss_pred cCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc--------ccccc---CCCeEEEEcCC
Q 012785 170 TGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA--------KRFNK---DGPYIELVTSP 238 (456)
Q Consensus 170 ~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~--------~~l~~---~~~~~i~v~~P 238 (456)
+|+++++..++.+++++|| +|++++|+|+.+...+...|++++.+++|. +.++. .++++++++||
T Consensus 104 ~G~~~al~~~~~~~~~~gd----~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P 179 (394)
T PRK05942 104 LGSKEGLTHLALAYVNPGD----VVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYP 179 (394)
T ss_pred cChHHHHHHHHHHhCCCCC----EEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCC
Confidence 9999999999999999999 999999999999999999999998877653 22322 36799999999
Q ss_pred CCCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCC---CCCCCcEEEecCccccCCCCceEEEEEEeC
Q 012785 239 NNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKD 302 (456)
Q Consensus 239 ~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~ 302 (456)
|||||.+++. +|++++++||+||+|.+..+ .++. ...+++|+++||||.||+||+|+||++++
T Consensus 180 ~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~- 258 (394)
T PRK05942 180 SNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGN- 258 (394)
T ss_pred CCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecC-
Confidence 9999999982 68899999999999985322 2222 12456899999999999999999999996
Q ss_pred HHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCc
Q 012785 303 MEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQ 382 (456)
Q Consensus 303 ~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~ 382 (456)
+++++.++........+++.++|.++..+|+ . .++++++.++.++++++.+.+.|++.+ +.+..|+|+
T Consensus 259 ~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~---~--------~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~ 326 (394)
T PRK05942 259 RHIIQGLRTLKTNLDYGIFSALQKAAETALQ---L--------PDSYLQQVQERYRTRRDFLIQGLGELG-WNIPPTKAT 326 (394)
T ss_pred HHHHHHHHHHHhhcccCCCHHHHHHHHHHHh---C--------cHHHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCee
Confidence 9999999988776678899999999999987 2 267899999999999999999998875 567777787
Q ss_pred ccccccccCCCCCceEEeecCc--c-HHHHHHHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhh
Q 012785 383 FCTFLGRAFEPQPAFAWLKCEQ--E-IEDCESFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKI 454 (456)
Q Consensus 383 ~~~~~~~~~~~~~~f~~~~~~~--~-~~~~~~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~ 454 (456)
+ |+|++++. + .+.+.++++++||.+.||+.|+. ..+++||+++.+.+.+.+++++|+++
T Consensus 327 ~-------------f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 327 M-------------YLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQA 389 (394)
T ss_pred e-------------EEEEECCCCCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 7 89999864 2 34455677899999999999974 46899999987788899999988764
No 28
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=1.7e-44 Score=371.70 Aligned_cols=301 Identities=18% Similarity=0.224 Sum_probs=239.3
Q ss_pred ccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccCHHHHHHHHHHHhc-CCCCCCCcEEEEeCCCCCChhh
Q 012785 129 SYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTGSTQLFQAALYALS-SQDASEPISVVSAAPYYSSYPS 206 (456)
Q Consensus 129 ~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G~~~al~~~~~~l~-~~gd~~~~~Vlv~~P~y~~~~~ 206 (456)
..|++..| .++||++||+|++. .|..+. +++|++|+|+++++.+++++++ ++|| .|++++|+|+.|..
T Consensus 109 ~~Y~~~~G-----~~~LR~aia~~~~~~~g~~~~-~~~I~it~Ga~~al~~~~~~l~~~~gD----~Vlv~~P~y~~y~~ 178 (481)
T PTZ00377 109 GAYTDSAG-----YPFVRKAVAAFIERRDGVPKD-PSDIFLTDGASSGIKLLLQLLIGDPSD----GVMIPIPQYPLYSA 178 (481)
T ss_pred cCcCcccC-----CHHHHHHHHHHHHHhcCCCCC-hhhEEEcCCHHHHHHHHHHHhccCCCC----EEEECCCCchhHHH
Confidence 56999999 59999999999965 566664 6799999999999999999998 7999 99999999999999
Q ss_pred hhhhcCCeEeeeccCc--------cccccC---------CCeEEEEcCCCCCCcccchH--------HhhhcCcEEEeee
Q 012785 207 ITDCVKSRLYKWAGDA--------KRFNKD---------GPYIELVTSPNNPDGSVRQS--------VVNRSGGILVHDL 261 (456)
Q Consensus 207 ~~~~~g~~~~~~~~d~--------~~l~~~---------~~~~i~v~~P~NPtG~~~~~--------l~~~~~~~iI~De 261 (456)
.++..|.+++.+++|. +.++.. ++++++++|||||||.++++ +|++++++||+||
T Consensus 179 ~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De 258 (481)
T PTZ00377 179 AITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADE 258 (481)
T ss_pred HHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEeh
Confidence 9999999998877653 223221 57888899999999999983 7889999999999
Q ss_pred cCCCCCC------CCCC----CC------CCCcEEEecCccc-cCCCCceEEEEEE---eCHHHHHHHHHHHhhccCcCC
Q 012785 262 AYYWPQY------TSIT----YP------ADHDLMLFTVSKS-TGHAGTRIGWALV---KDMEVAKKMTKYIELNTIGVS 321 (456)
Q Consensus 262 ~y~~~~~------~~~~----~~------~~~~i~i~S~SK~-~g~~G~RiG~l~~---~~~~~~~~l~~~~~~~~~~~s 321 (456)
+|.+..| .++. .. ..++|+++||||. +++||+|+||+++ + +++++++.+.+. ...+++
T Consensus 259 ~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p-~~li~~l~~~~~-~~~~~~ 336 (481)
T PTZ00377 259 VYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIP-PEVREQIYKLAS-INLCSN 336 (481)
T ss_pred hhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCC-HHHHHHHHHHhh-eecCCC
Confidence 9985322 1211 11 1268999999997 5999999999987 5 899999988764 456799
Q ss_pred hHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEee
Q 012785 322 KDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLK 401 (456)
Q Consensus 322 ~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~ 401 (456)
.++|.++..+|+....+... ...+.+++++.++.+++|++.+.+.|++++++.+..|+|++ |+|++
T Consensus 337 ~~~Q~a~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~-------------fl~~~ 402 (481)
T PTZ00377 337 VVGQLMTGLMCNPPREGDAS-YPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAM-------------YAFPR 402 (481)
T ss_pred hHHHHHHHHHhCCCCCCccc-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeE-------------EEEee
Confidence 99999999999631111000 00123344555567899999999999988778888899998 89976
Q ss_pred cC--c-------------cHHHHHHHHHhCCEEeecCCCCCC--CCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 402 CE--Q-------------EIEDCESFLKGNKILTRSGKHFGF--SPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 402 ~~--~-------------~~~~~~~~l~~~gI~v~pg~~fg~--~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
++ . +...+..+++++||.+.||+.|+. +.+++||||+.+++++++++++|++++
T Consensus 403 ~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~ 473 (481)
T PTZ00377 403 IELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFH 473 (481)
T ss_pred ccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH
Confidence 53 1 123456788899999999999984 457999999877789999999999876
No 29
>PRK07324 transaminase; Validated
Probab=100.00 E-value=1e-44 Score=362.10 Aligned_cols=320 Identities=19% Similarity=0.222 Sum_probs=263.0
Q ss_pred cCCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEcc
Q 012785 91 DGGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGT 170 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~ 170 (456)
..+.++++|+.|+|++++|+.+ +. ...++.+. ...|++..| .++||++||++++. .++++|++|+
T Consensus 23 ~~~~~~~~~~~~e~~~~~~~~~-~~-~~~~~~~~---~~~Y~~~~G-----~~~lr~~ia~~~~~-----~~~~~vi~t~ 87 (373)
T PRK07324 23 IAESCIDSLTLEELLALAGKNP-EA-FYQELGQK---KLTYGWIEG-----SPEFKEAVASLYQN-----VKPENILQTN 87 (373)
T ss_pred cccCCCCCCcHHHHHhccCcch-HH-HHHHHhcC---CccCCCCCC-----CHHHHHHHHHHhcC-----CChhhEEEcC
Confidence 4567899999999998877644 22 11222222 236888889 59999999999852 2467999999
Q ss_pred CHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc--------cccc---cCCCeEEEEcCCC
Q 012785 171 GSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA--------KRFN---KDGPYIELVTSPN 239 (456)
Q Consensus 171 G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~--------~~l~---~~~~~~i~v~~P~ 239 (456)
|+++++.+++.+++.+|| +|+++.|+|+.+...++..|++++.++.|. +.++ ..+++++++++||
T Consensus 88 G~~~al~~~~~~l~~~gd----~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~ 163 (373)
T PRK07324 88 GATGANFLVLYALVEPGD----HVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNAN 163 (373)
T ss_pred ChHHHHHHHHHHhCCCCC----EEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCC
Confidence 999999999999999999 999999999999999999999998777643 2232 1367899999999
Q ss_pred CCCcccchH--------HhhhcCcEEEeeecCCCCCC----CCCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHH
Q 012785 240 NPDGSVRQS--------VVNRSGGILVHDLAYYWPQY----TSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAK 307 (456)
Q Consensus 240 NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~----~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~ 307 (456)
||||.+++. +|+++|+++|+||+|.+..+ .++....+++|+++||||.+|++|+|+||++++ +++++
T Consensus 164 NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~-~~li~ 242 (373)
T PRK07324 164 NPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAAN-EEVID 242 (373)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecC-HHHHH
Confidence 999999982 68899999999999986332 223344578999999999999999999999996 99999
Q ss_pred HHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccc
Q 012785 308 KMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFL 387 (456)
Q Consensus 308 ~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~ 387 (456)
++++.+...+.+++.+.|.++..+|+ + .++++++.++.++++++.+.+.|++.+.+.+..|.|++
T Consensus 243 ~~~~~~~~~~~~~~~~~q~~a~~~l~---~--------~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~---- 307 (373)
T PRK07324 243 ILRKYRDYTMICAGVFDDMLASLALE---H--------RDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVS---- 307 (373)
T ss_pred HHHHHhCcEEecCChHHHHHHHHHHc---C--------HHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceE----
Confidence 99999887788899999999998886 2 26789999999999999999999987767778888877
Q ss_pred cccCCCCCceEEeecC--cc-HHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 388 GRAFEPQPAFAWLKCE--QE-IEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 388 ~~~~~~~~~f~~~~~~--~~-~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
|.|+.++ .+ .+.+.++++++||.++||+.|+. ++++||+++.+++.+++++++|++++
T Consensus 308 ---------~~~i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~~-~~~iRis~~~~~~~l~~~l~rl~~~l 368 (373)
T PRK07324 308 ---------TSFVKLDVDMPSEDFCLKLLKETGVLLVPGNRFDL-EGHVRIGYCCDTETLKKGLKKLSEFL 368 (373)
T ss_pred ---------EEEEEeCCCCCHHHHHHHHHHhcCEEEECccccCC-CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 5566554 23 44455567789999999999985 67999999888999999999999876
No 30
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=6.5e-44 Score=355.75 Aligned_cols=317 Identities=18% Similarity=0.241 Sum_probs=261.7
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCc-cCCCceEEEc
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNA-ITENHHIVVG 169 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~-~~~~~~I~~t 169 (456)
.+..+++|+.|+|+.+.++.+.+... . ... ...|+++.| .++||++|++|+.. +|.. .. +++|++|
T Consensus 25 ~~~~~i~l~~~~p~~~~~~~~~~~~~-~-~~~----~~~Y~~~~G-----~~~lr~~ia~~l~~~~~~~~~~-~~~I~it 92 (364)
T PRK07865 25 HPDGIVDLSVGTPVDPVPPVIQEALA-A-AAD----APGYPTTAG-----TPELREAIVGWLARRRGVTGLD-PAAVLPV 92 (364)
T ss_pred cCCCEEEcCCCCCCCCCCHHHHHHHH-H-HHh----hCCCCCccC-----CHHHHHHHHHHHHHHcCCCCCC-cccEEEc
Confidence 44578999999998776555544321 1 111 136998888 59999999999965 4665 54 5799999
Q ss_pred cCHHHHHHHHHHHh-cCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCccccccCCCeEEEEcCCCCCCcccchH
Q 012785 170 TGSTQLFQAALYAL-SSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKRFNKDGPYIELVTSPNNPDGSVRQS 248 (456)
Q Consensus 170 ~G~~~al~~~~~~l-~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~i~v~~P~NPtG~~~~~ 248 (456)
+|+++++.+++.++ +++|| +|++++|+|+.+...++..|++++.++ +.+.++..++++++++|||||||.+++.
T Consensus 93 ~G~~~~i~~~~~~l~~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~~~-~~~~l~~~~~~~v~~~~p~NPtG~~~~~ 167 (364)
T PRK07865 93 IGSKELVAWLPTLLGLGPGD----VVVIPELAYPTYEVGARLAGATVVRAD-SLTELGPQRPALIWLNSPSNPTGRVLGV 167 (364)
T ss_pred cChHHHHHHHHHHHcCCCCC----EEEECCCCcccHHHHHHhcCCEEEecC-ChhhCCcccceEEEEcCCCCCCCccCCH
Confidence 99999999988888 78999 999999999999999999999998886 4455655678999999999999999982
Q ss_pred --------HhhhcCcEEEeeecCCCCCCC--CCC--------CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHH
Q 012785 249 --------VVNRSGGILVHDLAYYWPQYT--SIT--------YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMT 310 (456)
Q Consensus 249 --------l~~~~~~~iI~De~y~~~~~~--~~~--------~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~ 310 (456)
+|++++++||+||+|.+..+. +.. ...+++|+++||||.||+||+|+||++++ +++++.++
T Consensus 168 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~-~~~~~~~~ 246 (364)
T PRK07865 168 DHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGD-PALVAELL 246 (364)
T ss_pred HHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecC-HHHHHHHH
Confidence 678899999999999853221 111 12368999999999999999999999996 99999999
Q ss_pred HHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccccccccc
Q 012785 311 KYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRA 390 (456)
Q Consensus 311 ~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~ 390 (456)
..+....++++.+.|.++.++|. + ++++++.++.++++++.+.+.|++.+ +.+..++|++
T Consensus 247 ~~~~~~~~~~~~~~q~~~~~~l~---~---------~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~------- 306 (364)
T PRK07865 247 EVRKHAGMMVPAPVQAAMVAALG---D---------DAHVREQRERYARRRAVLRPALEAAG-FRVDHSEAGL------- 306 (364)
T ss_pred HHHHhcCCCcCHHHHHHHHHHhC---C---------HHHHHHHHHHHHHHHHHHHHHHHHcC-CcccCCCccE-------
Confidence 88776778899999999998886 2 46788899999999999999999875 6677778887
Q ss_pred CCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHH
Q 012785 391 FEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLS 452 (456)
Q Consensus 391 ~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~ 452 (456)
|+|++++.+...+.+.++++||.++||..|+. .++++||+++.+++++++++++|+
T Consensus 307 ------~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 307 ------YLWATRGEDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTATDERIAAAVERLA 363 (364)
T ss_pred ------EEEEeCCCCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecCCHHHHHHHHHHhh
Confidence 89999865566777888999999999998874 478999999888999999999986
No 31
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=3.5e-44 Score=359.63 Aligned_cols=324 Identities=18% Similarity=0.260 Sum_probs=261.9
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccCH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTGS 172 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G~ 172 (456)
+++|+|+.|+|++.+++.+.+... ..+... ...|++..| .++||+++|++++. +|....++++|++|+|+
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~-~~~~~~---~~~Y~~~~g-----~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~ 90 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASI-RSLEQG---YTSYTANAG-----LLELRQEIAKYLKKRFAVSYDPNDEIIVTVGA 90 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHH-HHHhcC---CCCCCCCCC-----cHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCh
Confidence 478999999999875543332211 112222 346888888 59999999999965 47666544589999999
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC--------cccccc---CCCeEEEEcCCCCC
Q 012785 173 TQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD--------AKRFNK---DGPYIELVTSPNNP 241 (456)
Q Consensus 173 ~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d--------~~~l~~---~~~~~i~v~~P~NP 241 (456)
++++.+++.+++++|| +|++++|+|+.+...++..|.+++.++.+ .+.++. .+++++++++||||
T Consensus 91 ~~al~~~~~~l~~~gd----~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NP 166 (378)
T PRK07682 91 SQALDVAMRAIINPGD----EVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNP 166 (378)
T ss_pred HHHHHHHHHHhCCCCC----EEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCC
Confidence 9999999999999999 99999999999999999999998877653 233332 36789999999999
Q ss_pred CcccchH--------HhhhcCcEEEeeecCCCCCC----CCC---CCCCCCcEEEecCccccCCCCceEEEEEEeCHHHH
Q 012785 242 DGSVRQS--------VVNRSGGILVHDLAYYWPQY----TSI---TYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVA 306 (456)
Q Consensus 242 tG~~~~~--------l~~~~~~~iI~De~y~~~~~----~~~---~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~ 306 (456)
||.+++. +|+++++++|+||+|.+..+ .++ ....+++++++||||.||+||+|+||++++ ++++
T Consensus 167 tG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~-~~~i 245 (378)
T PRK07682 167 TGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP-VYFS 245 (378)
T ss_pred cCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcC-HHHH
Confidence 9999882 78899999999999986432 122 223478999999999999999999999997 9999
Q ss_pred HHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccccc
Q 012785 307 KKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTF 386 (456)
Q Consensus 307 ~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~ 386 (456)
+++.+......++++.+.|.++.++|+ ++ +.++++.++.++++++.+.+.|++++ +.+..|+|++
T Consensus 246 ~~l~~~~~~~~~~~~~~~q~a~~~~l~---~~--------~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~p~g~~--- 310 (378)
T PRK07682 246 EAMLKIHQYSMMCAPTMAQFAALEALR---AG--------NDDVIRMRDSYRKRRNFFVTSFNEIG-LTCHVPGGAF--- 310 (378)
T ss_pred HHHHHHHHhhccCCCHHHHHHHHHHHh---CC--------hHHHHHHHHHHHHHHHHHHHHHHHCC-CccCCCCeeE---
Confidence 999888766678899999999999997 43 45788999999999999999999874 5677788888
Q ss_pred ccccCCCCCceEEeecCc---cHHHHHHH-HHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 387 LGRAFEPQPAFAWLKCEQ---EIEDCESF-LKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 387 ~~~~~~~~~~f~~~~~~~---~~~~~~~~-l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
|+|++++. +.+.+.+. ++++||.++||..|+. .++++|||++.+++++++++++|+++++
T Consensus 311 ----------~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~ 375 (378)
T PRK07682 311 ----------YAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVE 375 (378)
T ss_pred ----------EEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 89998742 34555554 5688999999999975 4789999998888999999999998863
No 32
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=6.8e-44 Score=364.83 Aligned_cols=331 Identities=17% Similarity=0.270 Sum_probs=256.4
Q ss_pred cCCCCeEEecCCCCCCCchhHhhhcccccc----ccc----CccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCcc-
Q 012785 91 DGGERIINVDHGDPTMYEKYWQKVGDKTTI----VIP----GWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAI- 160 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~----~~~----~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~- 160 (456)
.++.++|+|+.++|.++. +++.+...... +.. ....+.+|++..| .++||++||+|++. ++...
T Consensus 35 ~~p~g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G-----~~~LR~aiA~~l~~~~~~~~~ 108 (468)
T PLN02450 35 KNPSGIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHG-----LPAFKNALAEFMSEIRGNKVT 108 (468)
T ss_pred cCCCeeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCC-----hHHHHHHHHHHHHHhhCCCCC
Confidence 345689999999998776 44443221110 000 1123456999889 59999999999964 45332
Q ss_pred CCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhh-hcCCeEeeeccCc-cc-------ccc----
Q 012785 161 TENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITD-CVKSRLYKWAGDA-KR-------FNK---- 227 (456)
Q Consensus 161 ~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~-~~g~~~~~~~~d~-~~-------l~~---- 227 (456)
.++++|++|+|+++++..++.+++++|| .|++++|+|+.|...+. ..|++++.++.+. ++ ++.
T Consensus 109 v~~~~Iiit~Ga~~al~~l~~~l~~pGd----~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~ 184 (468)
T PLN02450 109 FDPNKLVLTAGATSANETLMFCLAEPGD----AFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQ 184 (468)
T ss_pred cChHHeEEccChHHHHHHHHHHhCCCCC----EEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHH
Confidence 2468999999999999999999999999 99999999999998888 5899999887642 22 221
Q ss_pred -----CCCeEEEEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCC-----CCCCC-----------CCCCCc
Q 012785 228 -----DGPYIELVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQ-----YTSIT-----------YPADHD 278 (456)
Q Consensus 228 -----~~~~~i~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~-----~~~~~-----------~~~~~~ 278 (456)
.++++++++|||||||.+++. +|++++++||+||+|.+.. +.++. ...+++
T Consensus 185 ~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~v 264 (468)
T PLN02450 185 AQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRV 264 (468)
T ss_pred HHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcE
Confidence 257899999999999999993 6889999999999998522 22211 125789
Q ss_pred EEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHH
Q 012785 279 LMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMS 358 (456)
Q Consensus 279 i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~ 358 (456)
++++||||.||+||+|+||++++++.+.+.+.+... ...+|.++|.++..+|+ ++.. .++++++.++.++
T Consensus 265 i~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~Q~a~~~~L~---~~~~-----~~~~l~~~~~~l~ 334 (468)
T PLN02450 265 HIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSS--FGLVSSQTQYLLSALLS---DKKF-----TKNYLEENQKRLK 334 (468)
T ss_pred EEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhh--cCCCCHHHHHHHHHHhC---Cchh-----HHHHHHHHHHHHH
Confidence 999999999999999999999975666776665543 34579999999999997 4311 1347888999999
Q ss_pred HHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc---c------HHHHHHHHHhCCEEeecCCCCCC-
Q 012785 359 TRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ---E------IEDCESFLKGNKILTRSGKHFGF- 428 (456)
Q Consensus 359 ~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~---~------~~~~~~~l~~~gI~v~pg~~fg~- 428 (456)
++++.+.+.|++++ +.+.++.|++ |+|++++. + .+.+..+++++||.+.||+.|+.
T Consensus 335 ~rr~~l~~~L~~~g-i~~~~~~~g~-------------flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~ 400 (468)
T PLN02450 335 QRQKKLVSGLEAAG-IKCLKSNAGL-------------FCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCT 400 (468)
T ss_pred HHHHHHHHHHHHcC-CcccCCCceE-------------EEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCC
Confidence 99999999999884 6777788888 99999862 1 12344556779999999999974
Q ss_pred CCCeEEEEecC-ChhHHHHHHHHHHhhh
Q 012785 429 SPKYVRISMLD-RDENYNLFVQRLSKIL 455 (456)
Q Consensus 429 ~~~~iRis~~~-~~e~i~~~l~~L~~~l 455 (456)
.+++|||+|+. +++++++++++|++++
T Consensus 401 ~~g~~Rl~f~~~~~~~l~~~l~ri~~~l 428 (468)
T PLN02450 401 EPGWFRVCFANMSEETLDLAMKRLKSFV 428 (468)
T ss_pred CCCEEEEEecCCCHHHHHHHHHHHHHHH
Confidence 57899999996 8899999999999876
No 33
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=1.5e-43 Score=351.13 Aligned_cols=318 Identities=16% Similarity=0.223 Sum_probs=258.0
Q ss_pred eEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccCHHH
Q 012785 96 IINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTGSTQ 174 (456)
Q Consensus 96 ~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G~~~ 174 (456)
+++|+.|+|++++++.+.+.... ... ....|+++.| .++||+++++|++. +|..+.++++|++|+|+++
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~--~~~---~~~~Y~~~~G-----~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ 71 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALID--AVP---EVSQYPSALG-----TKALREAISGWFERRFGVKLDPDAQVLPSAGSKE 71 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHH--HHh---ccCCCCCCCC-----CHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH
Confidence 68999999998866544433221 111 2446999888 59999999999965 4777654339999999999
Q ss_pred HHHHHHHHhcCCC---CCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc-cc-------ccc---CCCeEEEEcCCCC
Q 012785 175 LFQAALYALSSQD---ASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA-KR-------FNK---DGPYIELVTSPNN 240 (456)
Q Consensus 175 al~~~~~~l~~~g---d~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~-~~-------l~~---~~~~~i~v~~P~N 240 (456)
++..++.+++++| | +|++++|+|+.|...++..|++++.++.+. ++ ++. .+++++++++|||
T Consensus 72 ai~~~~~~~~~~g~~~d----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~N 147 (350)
T TIGR03537 72 AIFHFPLVFIDPEEDRR----RVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHN 147 (350)
T ss_pred HHHHHHHHHcCCCCCCc----eEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCC
Confidence 9999999999877 6 899999999999999999999999877652 23 221 3679999999999
Q ss_pred CCcccchH--------HhhhcCcEEEeeecCCCCCCC----CCC-CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHH
Q 012785 241 PDGSVRQS--------VVNRSGGILVHDLAYYWPQYT----SIT-YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAK 307 (456)
Q Consensus 241 PtG~~~~~--------l~~~~~~~iI~De~y~~~~~~----~~~-~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~ 307 (456)
|||.+++. +|++++++||+||+|.+..+. ++. ...+++|+++||||.+|++|+|+||++++ +++.+
T Consensus 148 PtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~-~~~~~ 226 (350)
T TIGR03537 148 PTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGD-EKLIS 226 (350)
T ss_pred CcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecC-HHHHH
Confidence 99999982 688899999999999753211 111 23578999999999999999999999986 99999
Q ss_pred HHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccc
Q 012785 308 KMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFL 387 (456)
Q Consensus 308 ~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~ 387 (456)
++.........+.+.+.|.++.+.+. + ++++++.++.++++++.+.+.|++.+ +++..|.|++
T Consensus 227 ~~~~~~~~~~~~~~~~~q~~~~~~l~---~---------~~~~~~~r~~l~~~~~~~~~~l~~~g-~~~~~~~g~~---- 289 (350)
T TIGR03537 227 FLRKLRANFGVASPDFVQAAAKAAWS---D---------DNHVLERRKIFKRKRDLFIEFFNKVG-LEYLYPDATF---- 289 (350)
T ss_pred HHHHHHHhhccCCCHHHHHHHHHHhC---C---------cHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCCeEE----
Confidence 99988776677777788888877765 2 46788899999999999999999875 5677777887
Q ss_pred cccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhh
Q 012785 388 GRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKI 454 (456)
Q Consensus 388 ~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~ 454 (456)
|+|++++. +...+.+.|.++||.|+||..|+. .++++||+++.+++++++++++|+++
T Consensus 290 ---------~~~~~~~~~~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~~ 350 (350)
T TIGR03537 290 ---------YLWVKVPSGIDAKDYALRLLENGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWERV 350 (350)
T ss_pred ---------EEEEECCCCCCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhcC
Confidence 89999975 466777778889999999999975 36899999977889999999999864
No 34
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-43 Score=357.38 Aligned_cols=321 Identities=17% Similarity=0.207 Sum_probs=257.2
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCc-cCCCceEEEc
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNA-ITENHHIVVG 169 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~-~~~~~~I~~t 169 (456)
.+..+|+|+.|+|++.+++.+...... .+... ....|++ .| .++||+++|+|++. +|.. +.++++|++|
T Consensus 42 ~~~~~i~L~~g~p~~~~~~~~~~~l~~-~~~~~--~~~~Y~~-~G-----~~~lr~aia~~~~~~~g~~~~~~~~~I~it 112 (410)
T PRK06290 42 PDMELIDMGVGEPDEMADESVVEVLCE-EAKKP--ENRGYAD-NG-----IQEFKEAAARYMEKVFGVKDIDPVTEVIHS 112 (410)
T ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHHH-HHhCC--CCCCCCC-CC-----cHHHHHHHHHHHHHHcCCCcCCCcceEEEc
Confidence 456799999999998877655543221 11111 1235876 78 59999999999965 5766 6543489999
Q ss_pred cCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc--------cccc---CCCeEEEEcCC
Q 012785 170 TGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK--------RFNK---DGPYIELVTSP 238 (456)
Q Consensus 170 ~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~--------~l~~---~~~~~i~v~~P 238 (456)
+|++++|..++++++++|| +|++++|+|+.|...++..|++++.+++|.+ .++. .++++++++||
T Consensus 113 ~Gs~~al~~~~~~~~~~gd----~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP 188 (410)
T PRK06290 113 IGSKPALAMLPSCFINPGD----VTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYP 188 (410)
T ss_pred cCHHHHHHHHHHHhCCCCC----EEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECC
Confidence 9999999999999999999 9999999999999999999999998887643 2221 36789999999
Q ss_pred CCCCcccchH--------HhhhcCcEEEeeecCCCCCC----CCCC---CCCCCcEEEecCccccCCCCceEEEEEEeCH
Q 012785 239 NNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY----TSIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKDM 303 (456)
Q Consensus 239 ~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~----~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~ 303 (456)
|||||.+++. +|++++++||+||+|.+..+ .++. ...+++|+++||||.+|+||+|+||++++ +
T Consensus 189 ~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~-~ 267 (410)
T PRK06290 189 NNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGN-E 267 (410)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeC-H
Confidence 9999999993 68899999999999986322 1221 23467899999999999999999999996 9
Q ss_pred HHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcc
Q 012785 304 EVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQF 383 (456)
Q Consensus 304 ~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~ 383 (456)
++++.+...+.....+++.++|.++..+|+ + .+++++.++.++++++.+.+.|++.+ +.+.+|+|++
T Consensus 268 ~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~---~---------~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~p~g~f 334 (410)
T PRK06290 268 LIVKAFATVKDNNDSGQFIAIQKAGIYALD---H---------PEITEKIREKYSRRLDKLVKILNEVG-FKAEMPGGTF 334 (410)
T ss_pred HHHHHHHHHHhccccCCcHHHHHHHHHHhh---C---------cHHHHHHHHHHHHHHHHHHHHHHhCC-CeecCCCeee
Confidence 999999988876777888899999999987 2 35788899999999999999999875 6677788888
Q ss_pred cccccccCCCCCceEEeecCc---------cHHHHHHHH-HhCCEEeecCCCCCCCCCeEEEEecC---ChhHHHHHHHH
Q 012785 384 CTFLGRAFEPQPAFAWLKCEQ---------EIEDCESFL-KGNKILTRSGKHFGFSPKYVRISMLD---RDENYNLFVQR 450 (456)
Q Consensus 384 ~~~~~~~~~~~~~f~~~~~~~---------~~~~~~~~l-~~~gI~v~pg~~fg~~~~~iRis~~~---~~e~i~~~l~~ 450 (456)
|+|++++. +...+.+.| ++.+|.+.||+.|+ +++||+++. ++|+.+++++.
T Consensus 335 -------------~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~---~~lRi~~~~~~~~~~~~~~~~~~ 398 (410)
T PRK06290 335 -------------YLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAG---HFLRFSVTFEAKDEEEEDRILEE 398 (410)
T ss_pred -------------EEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCcccc---CeEEEEEEcccccccchhHHHHH
Confidence 89999863 244455555 45678888988764 699999973 78899999999
Q ss_pred HHhhh
Q 012785 451 LSKIL 455 (456)
Q Consensus 451 L~~~l 455 (456)
|++.|
T Consensus 399 l~~~~ 403 (410)
T PRK06290 399 IKRRL 403 (410)
T ss_pred HHHHH
Confidence 98876
No 35
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=7.4e-44 Score=354.26 Aligned_cols=318 Identities=18% Similarity=0.240 Sum_probs=262.1
Q ss_pred cCCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHh-cCc-cCCCceEEE
Q 012785 91 DGGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVV-GNA-ITENHHIVV 168 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~-g~~-~~~~~~I~~ 168 (456)
..+..++||+.|+|++++++.+..... . .. ....|+++.| .++||+++++|+... |.. +. +++|++
T Consensus 18 ~~~~~~i~l~~~~p~~~~~~~~~~~~~-~-~~----~~~~Y~~~~G-----~~~lr~~ia~~~~~~~~~~~~~-~~~I~i 85 (357)
T TIGR03539 18 SHPDGIVDLSVGTPVDPVPPLIRAALA-A-AA----DAPGYPQTWG-----TPELREAIVDWLERRRGVPGLD-PTAVLP 85 (357)
T ss_pred hCCCCeEEccCCCCCCCCCHHHHHHHH-H-HH----hhCCCCcccC-----CHHHHHHHHHHHHHhcCCCCCC-cCeEEE
Confidence 455678999999998776655443321 1 11 1246999899 599999999999654 655 54 579999
Q ss_pred ccCHHHHHHHHHHHh-cCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCccccccCCCeEEEEcCCCCCCcccch
Q 012785 169 GTGSTQLFQAALYAL-SSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKRFNKDGPYIELVTSPNNPDGSVRQ 247 (456)
Q Consensus 169 t~G~~~al~~~~~~l-~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~i~v~~P~NPtG~~~~ 247 (456)
|+|+++++..++.++ .++|| .|++++|+|+.+...++..|++++.++ |.+.++..+++++++++||||||.+++
T Consensus 86 t~G~~~~i~~~~~~l~~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~-~~~~l~~~~~~~v~~~~p~NPtG~~~~ 160 (357)
T TIGR03539 86 VIGTKELVAWLPTLLGLGPGD----TVVIPELAYPTYEVGALLAGATPVAAD-DPTELDPVGPDLIWLNSPGNPTGRVLS 160 (357)
T ss_pred ccChHHHHHHHHHHHcCCCCC----EEEECCCCcHHHHHHHHhcCCEEeccC-ChhhcCccCccEEEEeCCCCCcCccCC
Confidence 999999999999888 79999 999999999999999999999998886 556676667899999999999999998
Q ss_pred H--------HhhhcCcEEEeeecCCCCCCC--C---CC-----CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHH
Q 012785 248 S--------VVNRSGGILVHDLAYYWPQYT--S---IT-----YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKM 309 (456)
Q Consensus 248 ~--------l~~~~~~~iI~De~y~~~~~~--~---~~-----~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l 309 (456)
. +|+++|++||+||+|.+..+. + +. ...+++|+++||||.|+++|+|+||++++ +++++++
T Consensus 161 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~-~~~~~~~ 239 (357)
T TIGR03539 161 VDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGD-PALVAEL 239 (357)
T ss_pred HHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecC-HHHHHHH
Confidence 2 688999999999999753221 1 11 12357999999999999999999999986 9999999
Q ss_pred HHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccc
Q 012785 310 TKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGR 389 (456)
Q Consensus 310 ~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~ 389 (456)
.+.+.....+++.+.|.++.++|+ + ++++++.++.++++++.+.+.|++.+ +.+..|.|++
T Consensus 240 ~~~~~~~~~~~~~~~q~~~~~~l~---~---------~~~~~~~~~~~~~~~~~~~~~L~~~g-~~~~~p~~~~------ 300 (357)
T TIGR03539 240 LTVRKHAGLMVPAPVQAAMVAALG---D---------DGHVAEQKARYAARRAQLKPALEKAG-FRIDHSEAGL------ 300 (357)
T ss_pred HHHHhhcccCCCHHHHHHHHHHcC---C---------HHHHHHHHHHHHHHHHHHHHHHHHcC-CCCcCCCccE------
Confidence 888766678899999999998886 2 46788899999999999999999875 6777788887
Q ss_pred cCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHH
Q 012785 390 AFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLS 452 (456)
Q Consensus 390 ~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~ 452 (456)
|+|++++.+...+.+.|.++||.+.||..|+. .++++||+++.+++++++++++|.
T Consensus 301 -------~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l~ 357 (357)
T TIGR03539 301 -------YLWATRGEDAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARLT 357 (357)
T ss_pred -------EEEEECCCCHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecCCHHHHHHHHHhhC
Confidence 89999876666777888999999999998864 468999999888899999998873
No 36
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=8.3e-44 Score=369.61 Aligned_cols=328 Identities=17% Similarity=0.240 Sum_probs=254.4
Q ss_pred cCCCCeEEecCCCC---CCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEE
Q 012785 91 DGGERIINVDHGDP---TMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIV 167 (456)
Q Consensus 91 ~~~~~~i~l~~g~p---~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~ 167 (456)
..+.++|+|+.|+| ++++|+.+..... ..+ .. ...|++..| .++||++||+|+...+....++++|+
T Consensus 143 ~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~-~~~-~~---~~~Y~~~~G-----~~~lReaia~~~~~~~~~~~~~~~I~ 212 (517)
T PRK13355 143 AAGTHILKLNIGNPAPFGFRTPDEVVYDMA-QQL-TD---TEGYSDSKG-----LFSARKAIMQYAQLKGLPNVDVDDIY 212 (517)
T ss_pred HcCCCeEEecCcCCCcCCCCCCHHHHHHHH-HHh-hc---CCCCCCCcC-----hHHHHHHHHHHHHhcCCCCCChhHEE
Confidence 45678999999999 4655655544322 112 12 236999999 59999999999976665422467999
Q ss_pred EccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC--------cccccc---CCCeEEEEc
Q 012785 168 VGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD--------AKRFNK---DGPYIELVT 236 (456)
Q Consensus 168 ~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d--------~~~l~~---~~~~~i~v~ 236 (456)
+|+|+++++.+++.+++++|| +|++++|+|+.|...++..|++++.++.| .+.++. .++++++++
T Consensus 213 it~G~~eal~~~~~~l~~~Gd----~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~i~ 288 (517)
T PRK13355 213 TGNGVSELINLSMSALLDDGD----EVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVII 288 (517)
T ss_pred EeCcHHHHHHHHHHHhCCCCC----EEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEEEEE
Confidence 999999999999999999999 99999999999999999999998876654 333432 367899999
Q ss_pred CCCCCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCCCC-CC-CcEEEecCccccCCCCceEEEEEEe
Q 012785 237 SPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSITYP-AD-HDLMLFTVSKSTGHAGTRIGWALVK 301 (456)
Q Consensus 237 ~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~~~-~~-~~i~i~S~SK~~g~~G~RiG~l~~~ 301 (456)
|||||||.++++ +|++++++||+||+|.+..+ .++... .+ .+++++||||+|+++|+|+||++++
T Consensus 289 nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~ 368 (517)
T PRK13355 289 NPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILS 368 (517)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEee
Confidence 999999999983 68899999999999985332 222222 22 4677899999999999999999964
Q ss_pred -CHHH----HHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q 012785 302 -DMEV----AKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSV 376 (456)
Q Consensus 302 -~~~~----~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~ 376 (456)
++++ ++.+... .....+++.++|.++..+|. +.. ..+++++..++ +.++|+.+.+.|++++++++
T Consensus 369 ~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~a~~~aL~---~~~-----~~~~~~~~~~~-~~~~r~~l~~~L~~~~g~~~ 438 (517)
T PRK13355 369 GNKRIAKDYIEGLNML-ANMRLCSNVPAQSIVQTALG---GHQ-----SVKDYLVPGGR-VYEQRELVYNALNAIPGISA 438 (517)
T ss_pred CchhhHHHHHHHHHHH-hcCcCCcChHHHHHHHHHhc---CCc-----cHHHHHHHHHH-HHHHHHHHHHHHhcCCCccc
Confidence 2433 4444333 22446789999999999886 211 12566666544 45668999999998867888
Q ss_pred cCCCCcccccccccCCCCCceEEeecCc-------cHHHHHHHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHH
Q 012785 377 PELPSQFCTFLGRAFEPQPAFAWLKCEQ-------EIEDCESFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFV 448 (456)
Q Consensus 377 ~~~~g~~~~~~~~~~~~~~~f~~~~~~~-------~~~~~~~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l 448 (456)
..|+|+| |+|++++. +.+.+.++|+++||.|+||+.|+. .+++|||+|+.+++++++++
T Consensus 439 ~~p~g~f-------------y~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~a~ 505 (517)
T PRK13355 439 VKPKAAF-------------YIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLEDAM 505 (517)
T ss_pred CCCCeee-------------EEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHHHH
Confidence 8999998 89988752 345677889999999999999974 57899999977999999999
Q ss_pred HHHHhhh
Q 012785 449 QRLSKIL 455 (456)
Q Consensus 449 ~~L~~~l 455 (456)
++|++++
T Consensus 506 ~rl~~~~ 512 (517)
T PRK13355 506 DRLADFF 512 (517)
T ss_pred HHHHHHH
Confidence 9999886
No 37
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=2.7e-43 Score=353.95 Aligned_cols=323 Identities=19% Similarity=0.240 Sum_probs=262.0
Q ss_pred CCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCc-eEEEcc
Q 012785 93 GERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENH-HIVVGT 170 (456)
Q Consensus 93 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~-~I~~t~ 170 (456)
.+.+|+|+.|+|++++++.+.+... ..+... ...|++..| .++||++++++++. +|.... ++ +|++|+
T Consensus 27 ~~~~i~l~~~~p~~~~~~~~~~a~~-~~~~~~---~~~Y~~~~g-----~~~lr~~ia~~l~~~~g~~~~-~~~~I~~t~ 96 (387)
T PRK07683 27 YDNLISLTIGQPDFPTPSHVKEAAK-RAITEN---YTSYTHNAG-----LLELRKAACNFVKDKYDLHYS-PESEIIVTI 96 (387)
T ss_pred cCCeEEecCCCCCCCCCHHHHHHHH-HHHhcC---CCCCCCCCC-----CHHHHHHHHHHHHHHhCCCCC-CCCcEEEeC
Confidence 3578999999998776554443221 112211 346888788 59999999999964 576665 45 899999
Q ss_pred CHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcccc-------cc---CCCeEEEEcCCCC
Q 012785 171 GSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKRF-------NK---DGPYIELVTSPNN 240 (456)
Q Consensus 171 G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l-------~~---~~~~~i~v~~P~N 240 (456)
|+++++.+++++++++|| +|++++|+|+.+...++..|++++.++.|.+++ +. .+++++++++|||
T Consensus 97 G~~~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~N 172 (387)
T PRK07683 97 GASEAIDIAFRTILEPGT----EVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSN 172 (387)
T ss_pred ChHHHHHHHHHHhCCCCC----EEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCC
Confidence 999999999999999999 999999999999999999999999887764433 21 3578999999999
Q ss_pred CCcccchH--------HhhhcCcEEEeeecCCCCCC----CCCC---CCCCCcEEEecCccccCCCCceEEEEEEeCHHH
Q 012785 241 PDGSVRQS--------VVNRSGGILVHDLAYYWPQY----TSIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEV 305 (456)
Q Consensus 241 PtG~~~~~--------l~~~~~~~iI~De~y~~~~~----~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~ 305 (456)
|||.+++. +|+++|+++|+||+|.+..+ .++. +..+++|+++||||.+|+||+|+||++++ +++
T Consensus 173 PtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~-~~l 251 (387)
T PRK07683 173 PTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAP-SYL 251 (387)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcC-HHH
Confidence 99999872 68889999999999985322 2222 23568999999999999999999999997 899
Q ss_pred HHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccc
Q 012785 306 AKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCT 385 (456)
Q Consensus 306 ~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~ 385 (456)
++++.+.......+++.+.|.++..+|. ++ +.++++.++.++++++.+.+.|++.+ +.+..++|++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~--------~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~-- 317 (387)
T PRK07683 252 AKHILKVHQYNVTCASSISQYAALEALT---AG--------KDDAKMMRHQYKKRRDYVYNRLISMG-LDVEKPTGAF-- 317 (387)
T ss_pred HHHHHHHHHhccCCCChHHHHHHHHHHh---CC--------hHHHHHHHHHHHHHHHHHHHHHHHcC-CcccCCCeeE--
Confidence 9999887665567788899999999987 33 46788899999999999999998874 6777788887
Q ss_pred cccccCCCCCceEEeecCc---cH-HHHHHHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 386 FLGRAFEPQPAFAWLKCEQ---EI-EDCESFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 386 ~~~~~~~~~~~f~~~~~~~---~~-~~~~~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
|+|+.++. +. +.+.++++++||.++||+.|+. +++++||+++.+++++++++++|.+++
T Consensus 318 -----------~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~~~l 381 (387)
T PRK07683 318 -----------YLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFL 381 (387)
T ss_pred -----------EEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 89998753 33 3445667899999999999964 468999999888999999999999876
No 38
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=2.4e-43 Score=357.05 Aligned_cols=327 Identities=17% Similarity=0.199 Sum_probs=257.0
Q ss_pred cCCCCeEEecCCCCC----CCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHh-------cCc
Q 012785 91 DGGERIINVDHGDPT----MYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVV-------GNA 159 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~-------g~~ 159 (456)
..++++|+|+.|+|+ +.+++.+.+... ..+... ....|+++.| .++||++||+|++.. |..
T Consensus 30 ~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~-~~~~~~--~~~~Y~~~~G-----~~~Lr~aia~~~~~~~~~~~~~~~~ 101 (412)
T PTZ00433 30 PSPKSIIKLSVGDPTLDGNLLTPAIQTKALV-EAVDSQ--ECNGYPPTVG-----SPEAREAVATYWRNSFVHKESLKST 101 (412)
T ss_pred CCCCCeeecCCcCCCCcCCCCCCHHHHHHHH-HHhhcC--CCCCCCCCCC-----cHHHHHHHHHHHHhhccccccccCC
Confidence 356789999999997 334444443221 112221 2357999888 599999999999752 344
Q ss_pred cCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc--------ccccc---C
Q 012785 160 ITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA--------KRFNK---D 228 (456)
Q Consensus 160 ~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~--------~~l~~---~ 228 (456)
+ ++++|++|+|+++++.+++++++.+|| +|++++|+|+.+...++..|++++.++++. +.++. .
T Consensus 102 ~-~~~~i~it~G~~~al~~~~~~~~~~gd----~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~ 176 (412)
T PTZ00433 102 I-KKDNVVLCSGVSHAILMALTALCDEGD----NILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDD 176 (412)
T ss_pred C-ChhhEEEeCChHHHHHHHHHHhcCCCC----EEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhcc
Confidence 4 468999999999999999999999999 999999999999999999999998776643 23322 2
Q ss_pred CCeEEEEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCCCC--CCCcEEEecCccccCCCCc
Q 012785 229 GPYIELVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSITYP--ADHDLMLFTVSKSTGHAGT 293 (456)
Q Consensus 229 ~~~~i~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~~~--~~~~i~i~S~SK~~g~~G~ 293 (456)
++++++++|||||||.+++. +|+++|++||+||+|.+..+ .++... ..++|+++||||.||+||+
T Consensus 177 ~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGl 256 (412)
T PTZ00433 177 RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGW 256 (412)
T ss_pred CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCe
Confidence 57899999999999999882 68889999999999986332 222221 2358999999999999999
Q ss_pred eEEEEEEeC-----HHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 012785 294 RIGWALVKD-----MEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAV 368 (456)
Q Consensus 294 RiG~l~~~~-----~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L 368 (456)
|+||+++++ +++++.+.+... ...+++.+.|.++..+|. ++ .++++++.++.++++++.+.+.|
T Consensus 257 RlG~~i~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~---~~-------~~~~~~~~~~~~~~~r~~l~~~L 325 (412)
T PTZ00433 257 RLGWLLLVDPHGNGGDFLDGMKRLGM-LVCGPCSVVQAALGEALL---NT-------PQEHLEQIVAKLEEGAMVLYNHI 325 (412)
T ss_pred eEEEEEEeCCcccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHh---cC-------cHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999721 457777776543 346899999999999887 22 26899999999999999999999
Q ss_pred HhcCCccccCCCCcccccccccCCCCCceEEeecCc-------cHHHHHHHH-HhCCEEeecCCCCCCCCCeEEEEecCC
Q 012785 369 QKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-------EIEDCESFL-KGNKILTRSGKHFGFSPKYVRISMLDR 440 (456)
Q Consensus 369 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-------~~~~~~~~l-~~~gI~v~pg~~fg~~~~~iRis~~~~ 440 (456)
++..++.+..|+|++ |+|++++. +...+.+.| +++||.++||+.|+. ++++||+|+..
T Consensus 326 ~~~~~~~~~~p~gg~-------------f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-~~~iRis~~~~ 391 (412)
T PTZ00433 326 GECIGLSPTMPRGSM-------------FLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHM-PGFTRLTISRP 391 (412)
T ss_pred hcCCCCcccCCCeeE-------------EEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCC-CCeEEEEecCC
Confidence 886556677777887 99998853 234455554 578999999999975 78999999888
Q ss_pred hhHHHHHHHHHHhhh
Q 012785 441 DENYNLFVQRLSKIL 455 (456)
Q Consensus 441 ~e~i~~~l~~L~~~l 455 (456)
++++++++++|.+++
T Consensus 392 ~e~l~~al~~l~~~~ 406 (412)
T PTZ00433 392 VEVLREAVERIKAFC 406 (412)
T ss_pred HHHHHHHHHHHHHHH
Confidence 889999999999876
No 39
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-45 Score=345.12 Aligned_cols=325 Identities=16% Similarity=0.277 Sum_probs=268.9
Q ss_pred ecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccCHHHHHH
Q 012785 99 VDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTGSTQLFQ 177 (456)
Q Consensus 99 l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G~~~al~ 177 (456)
|+.|+|++++|..+.+..... + ... ..++|.+..| .++|+++|++.+.. +|....+.++|++|+|+.++|.
T Consensus 36 LgqGfp~~~~P~fv~ea~~~~-~-~~~-~~~qYt~~~G-----~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~ 107 (420)
T KOG0257|consen 36 LGQGFPDFPPPKFVTEAAKNA-A-KEP-STNQYTRGYG-----LPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAIS 107 (420)
T ss_pred ccCCCCCCCCcHHHHHHHHHH-h-ccc-hhccccccCC-----chHHHHHHHHHHHHHhccccCCcccEEEecCchHHHH
Confidence 999999999998777643322 2 221 2467888889 59999999999865 6666667788999999999999
Q ss_pred HHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeee--------------ccCcccccc---CCCeEEEEcCCCC
Q 012785 178 AALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKW--------------AGDAKRFNK---DGPYIELVTSPNN 240 (456)
Q Consensus 178 ~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~--------------~~d~~~l~~---~~~~~i~v~~P~N 240 (456)
.++++++++|| +|++.+|.|+.|...++++|.+.+.+ .+|.+.++. .++|+|++|+|||
T Consensus 108 ~~~~~l~~~GD----eVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhN 183 (420)
T KOG0257|consen 108 SALLGLLNPGD----EVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHN 183 (420)
T ss_pred HHHHHHcCCCC----EEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCC
Confidence 99999999999 99999999999999999999887643 345555543 3789999999999
Q ss_pred CCcccchH--------HhhhcCcEEEeeecCCCC--------CCCCCCCCCCCcEEEecCccccCCCCceEEEEEEeCHH
Q 012785 241 PDGSVRQS--------VVNRSGGILVHDLAYYWP--------QYTSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDME 304 (456)
Q Consensus 241 PtG~~~~~--------l~~~~~~~iI~De~y~~~--------~~~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~ 304 (456)
|||.+.++ +|+++|+++|.||+|.+. ....++...+++|.++||||+||+.|||+||++++ +.
T Consensus 184 PtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp-~~ 262 (420)
T KOG0257|consen 184 PTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGP-KH 262 (420)
T ss_pred CcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeech-HH
Confidence 99999994 899999999999999842 22345677899999999999999999999999996 99
Q ss_pred HHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccc
Q 012785 305 VAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFC 384 (456)
Q Consensus 305 ~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~ 384 (456)
+...+........+..+.+.|.+.++++..-.. .. ......+...+.+.|+++|+.|.+.|.+++ +.+..|+|++
T Consensus 263 L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~-~~--~p~~~y~~~~~~~~y~~krdil~k~L~~lg-~~v~~p~gay- 337 (420)
T KOG0257|consen 263 LYSALFPVHQNFVFTCPTPIQEASAAAFALELA-CL--QPGGSYFITELVKEYKEKRDILAKALEELG-LKVTGPEGAY- 337 (420)
T ss_pred hhhhHHHHhhccccccCcHHHHHHHHHHhhhhh-cc--CCcchhHHHHHHHHHHHHHHHHHHHHHhcC-CccccCCCce-
Confidence 999999998888999999999999988873210 00 000124566699999999999999999994 8888999999
Q ss_pred ccccccCCCCCceEEeecC---------------ccHHHHHHHHHhCCEEeecCCCCCC------CCCeEEEEecCChhH
Q 012785 385 TFLGRAFEPQPAFAWLKCE---------------QEIEDCESFLKGNKILTRSGKHFGF------SPKYVRISMLDRDEN 443 (456)
Q Consensus 385 ~~~~~~~~~~~~f~~~~~~---------------~~~~~~~~~l~~~gI~v~pg~~fg~------~~~~iRis~~~~~e~ 443 (456)
|+|++++ .+...+..++++.|+.+.|++.|+. ..+++|+++..+++.
T Consensus 338 ------------yl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~ 405 (420)
T KOG0257|consen 338 ------------YLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADET 405 (420)
T ss_pred ------------EEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHH
Confidence 8999886 1234467889999999999999985 246899999889999
Q ss_pred HHHHHHHHHh
Q 012785 444 YNLFVQRLSK 453 (456)
Q Consensus 444 i~~~l~~L~~ 453 (456)
++.++++|++
T Consensus 406 L~~a~e~l~~ 415 (420)
T KOG0257|consen 406 LRKAIERLKK 415 (420)
T ss_pred HHHHHHHHhh
Confidence 9999999984
No 40
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-43 Score=352.69 Aligned_cols=324 Identities=20% Similarity=0.268 Sum_probs=264.5
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccCH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTGS 172 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G~ 172 (456)
+.+|+|+.|+|++++++.+.+... ..+... ...|++..| .++||+++++++.. +|..+. +++|++|+|+
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~-~~~~~~---~~~Y~~~~G-----~~~lr~~la~~~~~~~~~~~~-~~~i~~t~g~ 93 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAA-AALADG---ETFYTHNLG-----IPELREALARYVSRLHGVATP-PERIAVTSSG 93 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHH-HHHhcC---CCCCCCCCC-----CHHHHHHHHHHHHHHhCCCcC-cceEEEeCCh
Confidence 468999999999987766654422 122222 235888888 59999999999965 465554 5799999999
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc---------ccccc---CCCeEEEEcCCCC
Q 012785 173 TQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA---------KRFNK---DGPYIELVTSPNN 240 (456)
Q Consensus 173 ~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~---------~~l~~---~~~~~i~v~~P~N 240 (456)
++++.+++.+++++|| +|++++|+|+.+...++..|++++.++.|. +.++. .+++++++++|||
T Consensus 94 ~~al~~~~~~l~~~gd----~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~N 169 (382)
T PRK06108 94 VQALMLAAQALVGPGD----EVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNN 169 (382)
T ss_pred HHHHHHHHHHhcCCCC----EEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCC
Confidence 9999999999999999 999999999999999999999998777653 22322 2578899999999
Q ss_pred CCcccchH--------HhhhcCcEEEeeecCCCCCCC------C---CCCCCCCcEEEecCccccCCCCceEEEEEEeCH
Q 012785 241 PDGSVRQS--------VVNRSGGILVHDLAYYWPQYT------S---ITYPADHDLMLFTVSKSTGHAGTRIGWALVKDM 303 (456)
Q Consensus 241 PtG~~~~~--------l~~~~~~~iI~De~y~~~~~~------~---~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~ 303 (456)
|||.+++. +|+++++++|+||+|.+..+. + +....+++++++||||.||++|+|+||++++ +
T Consensus 170 PtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~-~ 248 (382)
T PRK06108 170 PTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAP-P 248 (382)
T ss_pred CCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCC-H
Confidence 99999872 688999999999999864322 1 1122468999999999999999999999997 9
Q ss_pred HHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcc
Q 012785 304 EVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQF 383 (456)
Q Consensus 304 ~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~ 383 (456)
++++.+.+.......+++.+.|.++..+|. ++ ++++++.+++++++++.+.+.|++++++.+..|+|++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~---~~--------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~ 317 (382)
T PRK06108 249 ALGQVLEKLIEYNTSCVAQFVQRAAVAALD---EG--------EDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAM 317 (382)
T ss_pred HHHHHHHHHHHhcccCCChHHHHHHHHHHh---CC--------hHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeE
Confidence 999999888766678899999999999997 33 5788899999999999999999887667777777877
Q ss_pred cccccccCCCCCceEEeecCc--cHHHHHH-HHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 384 CTFLGRAFEPQPAFAWLKCEQ--EIEDCES-FLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 384 ~~~~~~~~~~~~~f~~~~~~~--~~~~~~~-~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
|+|++++. +..++.+ +++++||.++||+.|+. .++++||+++.+++++++++++|+++++
T Consensus 318 -------------~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 318 -------------YAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLA 381 (382)
T ss_pred -------------EEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 89999864 3444544 55789999999999964 4789999998889999999999998763
No 41
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=3.7e-43 Score=360.59 Aligned_cols=331 Identities=18% Similarity=0.298 Sum_probs=255.4
Q ss_pred cCCCCeEEecCCCCCC--Cc-hhHhhhccccccc-ccC---ccccccccCCCCcccCCCHHHHHHHHHHHHH-hc--Ccc
Q 012785 91 DGGERIINVDHGDPTM--YE-KYWQKVGDKTTIV-IPG---WQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VG--NAI 160 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~~--~~-~~~~~~~~~~~~~-~~~---~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g--~~~ 160 (456)
.++.++|+|+..++.+ .. ++|+......... ..+ ......|++..| .++||++||+|++. +| ..+
T Consensus 43 ~np~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G-----~~~LR~aiA~~l~~~~g~~v~v 117 (496)
T PLN02376 43 RNPHGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHG-----LKKFRQAIAHFMGKARGGKVTF 117 (496)
T ss_pred cCCCceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCC-----cHHHHHHHHHHHHHHhCCCCcC
Confidence 3456899999999876 33 5666653221111 111 222456888899 59999999999965 45 334
Q ss_pred CCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhh-hcCCeEeeeccCc--------cccc-----
Q 012785 161 TENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITD-CVKSRLYKWAGDA--------KRFN----- 226 (456)
Q Consensus 161 ~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~-~~g~~~~~~~~d~--------~~l~----- 226 (456)
++++|++|+|+++++++++.+|++||| .|++++|+|+.+...+. ..|++++.++++. +.++
T Consensus 118 -~pe~Ivit~Ga~~al~~l~~~l~~pGD----~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~ 192 (496)
T PLN02376 118 -DPERVVMSGGATGANETIMFCLADPGD----VFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKK 192 (496)
T ss_pred -ChhhEEEccchHHHHHHHHHHhCCCCC----EEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHH
Confidence 467999999999999999999999999 99999999999999887 5899999887632 2232
Q ss_pred ----cCCCeEEEEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCC-----CCCCC---C-------CCCCcE
Q 012785 227 ----KDGPYIELVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQ-----YTSIT---Y-------PADHDL 279 (456)
Q Consensus 227 ----~~~~~~i~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~-----~~~~~---~-------~~~~~i 279 (456)
..++++++++|||||||.++++ +|++++++||+||+|.+.. +.++. . ..++++
T Consensus 193 a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~ 272 (496)
T PLN02376 193 AQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIH 272 (496)
T ss_pred HHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEE
Confidence 1257899999999999999993 7889999999999998632 22321 1 013567
Q ss_pred EEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHH
Q 012785 280 MLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMST 359 (456)
Q Consensus 280 ~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~ 359 (456)
+++||||.||+||+|+||++++++.+.+.++.... ...+|.+.|.++..+|+ ++. -.++++++.++.+++
T Consensus 273 vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~--~~~vs~~~Q~a~~~~L~---d~~-----~~~~~l~~~r~~l~~ 342 (496)
T PLN02376 273 IVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSS--FGLVSSQTQLMLASMLS---DDQ-----FVDNFLMESSRRLGI 342 (496)
T ss_pred EEEeccccCCCCcceEEEEEECCHHHHHHHHHHhh--cCCCCHHHHHHHHHHhC---Chh-----HHHHHHHHHHHHHHH
Confidence 79999999999999999999976777776655543 34589999999999997 431 025678888999999
Q ss_pred HHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCcc---------HHHHHH-HHHhCCEEeecCCCCCC-
Q 012785 360 RWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQE---------IEDCES-FLKGNKILTRSGKHFGF- 428 (456)
Q Consensus 360 ~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~---------~~~~~~-~l~~~gI~v~pg~~fg~- 428 (456)
+++.+.+.|++.+ +.+..+.||+ |+|++++.. ...+.+ +++++||.+.||+.|+.
T Consensus 343 r~~~l~~~L~~~g-i~~~~~~aG~-------------flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~ 408 (496)
T PLN02376 343 RHKVFTTGIKKAD-IACLTSNAGL-------------FAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCT 408 (496)
T ss_pred HHHHHHHHHHHCC-CcccCCCceE-------------EEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCC
Confidence 9999999999864 6667778888 999998531 123334 45567999999999974
Q ss_pred CCCeEEEEecC-ChhHHHHHHHHHHhhh
Q 012785 429 SPKYVRISMLD-RDENYNLFVQRLSKIL 455 (456)
Q Consensus 429 ~~~~iRis~~~-~~e~i~~~l~~L~~~l 455 (456)
.+++|||+|+. +++.+++++++|++++
T Consensus 409 ~~g~~Ri~fa~~~~~~l~~al~rl~~~l 436 (496)
T PLN02376 409 EPGWFRICFANMDDDTLHVALGRIQDFV 436 (496)
T ss_pred CCCEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 57899999986 8899999999999876
No 42
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=3.9e-43 Score=353.77 Aligned_cols=327 Identities=19% Similarity=0.245 Sum_probs=264.1
Q ss_pred cCCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEc
Q 012785 91 DGGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVG 169 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t 169 (456)
..+..+++|+.|+|+...++.+..... ...... ....|+++.| .++||++|++|++. +|....+.++|++|
T Consensus 26 ~~~~~~i~l~~g~p~~~~~~~~~~~~~-~~~~~~--~~~~Y~~~~G-----~~~lr~aia~~~~~~~g~~~~~~~~i~~t 97 (395)
T PRK08175 26 RRGEDIIDFSMGNPDGPTPPHIVEKLC-EVAQRP--DTHGYSTSRG-----IPRLRRAISRWYQDRYDVDIDPESEAIVT 97 (395)
T ss_pred hcCCCeEEcCCCCCCCCCCHHHHHHHH-HHHhCC--CcCCCCCCCC-----CHHHHHHHHHHHHHHhCCCCCCCCcEEEc
Confidence 456789999999999876654443221 111111 1346999999 59999999999964 57766543489999
Q ss_pred cCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCccc-----ccc------CCCeEEEEcCC
Q 012785 170 TGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKR-----FNK------DGPYIELVTSP 238 (456)
Q Consensus 170 ~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~-----l~~------~~~~~i~v~~P 238 (456)
+|+++++.+++..++++|| +|++++|+|+.+...++..|.+++.++.|.++ ++. .+++++++++|
T Consensus 98 ~G~~~~l~~~~~~~~~~gd----~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~~~v~i~~p 173 (395)
T PRK08175 98 IGSKEGLAHLMLATLDHGD----TVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFP 173 (395)
T ss_pred cCcHHHHHHHHHHhCCCCC----EEEEcCCCCcchHHHHHHcCCeEEEEecccCCCcHHHHHHHHhhccCCceEEEEeCC
Confidence 9999999999999999999 99999999999999999999999888776432 221 25789999999
Q ss_pred CCCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCC---CCCCCcEEEecCccccCCCCceEEEEEEeC
Q 012785 239 NNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKD 302 (456)
Q Consensus 239 ~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~ 302 (456)
|||||.+++. +|+++|+++|+||+|.+..+ .++. ...+++|+++||||.||+||+|+||++++
T Consensus 174 ~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~- 252 (395)
T PRK08175 174 SNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGN- 252 (395)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCC-
Confidence 9999999983 78899999999999975322 1221 12467899999999999999999999996
Q ss_pred HHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCc
Q 012785 303 MEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQ 382 (456)
Q Consensus 303 ~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~ 382 (456)
+++++++.+.+.....+++.+.|.++..+|. +. +++++++++.++++++.+.+.|+..+ +.+..|.|+
T Consensus 253 ~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~--------~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~p~~g 320 (395)
T PRK08175 253 PELVSALARIKSYHDYGTFTPLQVAAIAALE---GD--------QQCVRDIAEQYKRRRDVLVKGLHEAG-WMVEMPKAS 320 (395)
T ss_pred HHHHHHHHHHHhhcccCCCcHHHHHHHHHHh---Cc--------HHHHHHHHHHHHHHHHHHHHHHHHcC-CcccCCCEE
Confidence 9999999988877778888999999998886 22 67899999999999999999999885 666677777
Q ss_pred ccccccccCCCCCceEEeecCcc-----HHHHHH-HHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 383 FCTFLGRAFEPQPAFAWLKCEQE-----IEDCES-FLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 383 ~~~~~~~~~~~~~~f~~~~~~~~-----~~~~~~-~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
+ |+|++++.. ...+.+ +++++||.|.||+.|+. .++++||+++.+++.+++++++|++++
T Consensus 321 ~-------------~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l 387 (395)
T PRK08175 321 M-------------YVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMF 387 (395)
T ss_pred E-------------EEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 7 999999742 345554 56689999999999974 467999999778899999999999876
No 43
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.2e-43 Score=353.00 Aligned_cols=324 Identities=20% Similarity=0.268 Sum_probs=264.4
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEcc
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGT 170 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~ 170 (456)
.+.++++|+.|.|++++++.+.+... ..+.+. ...|+++.| .++||+++++++.. +|.... +++|++|+
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~~~~~~~-~~~~~~---~~~Y~~~~G-----~~~lr~~ia~~l~~~~g~~~~-~~~i~~t~ 100 (402)
T PRK06107 31 AGRSIVDLTVGEPDFDTPDHIKQAAV-AAIERG---ETKYTLVNG-----TPALRKAIIAKLERRNGLHYA-DNEITVGG 100 (402)
T ss_pred ccCCEEEcCCCCCCCCCCHHHHHHHH-HHHHcC---CCCCCCCCC-----CHHHHHHHHHHHHHhcCCCCC-hhhEEEeC
Confidence 45678999999999886655543322 222222 246999999 59999999999965 466665 57999999
Q ss_pred CHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC--------cccccc---CCCeEEEEcCCC
Q 012785 171 GSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD--------AKRFNK---DGPYIELVTSPN 239 (456)
Q Consensus 171 G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d--------~~~l~~---~~~~~i~v~~P~ 239 (456)
|+++++..++.+++++|| +|++++|+|..|...+...+.+.+.++.+ .+.++. .++++++++|||
T Consensus 101 G~~~al~~~~~~~~~~gd----~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~ 176 (402)
T PRK06107 101 GAKQAIFLALMATLEAGD----EVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPS 176 (402)
T ss_pred CHHHHHHHHHHHhcCCCC----EEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCC
Confidence 999999999999999999 99999999999999988888887766543 223332 257889999999
Q ss_pred CCCcccchH--------Hhhhc-CcEEEeeecCCCCCC-----CCCC----CCCCCcEEEecCccccCCCCceEEEEEEe
Q 012785 240 NPDGSVRQS--------VVNRS-GGILVHDLAYYWPQY-----TSIT----YPADHDLMLFTVSKSTGHAGTRIGWALVK 301 (456)
Q Consensus 240 NPtG~~~~~--------l~~~~-~~~iI~De~y~~~~~-----~~~~----~~~~~~i~i~S~SK~~g~~G~RiG~l~~~ 301 (456)
||||.+++. +|+++ ++++|+||+|.+..+ .++. ...+++|+++||||.||+||+|+||++++
T Consensus 177 NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~ 256 (402)
T PRK06107 177 NPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGP 256 (402)
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecC
Confidence 999999972 67887 999999999975322 2221 12368999999999999999999999997
Q ss_pred CHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCC
Q 012785 302 DMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPS 381 (456)
Q Consensus 302 ~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g 381 (456)
+++++.+.........+++.+.|.++..+|. ++ +.++++.++.++++++.+.+.|++++++.+.+|.|
T Consensus 257 -~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~---~~--------~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~g 324 (402)
T PRK06107 257 -ADLIAAINKLQSQSSSCPSSISQAAAAAALN---GD--------QSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDG 324 (402)
T ss_pred -HHHHHHHHHHHHhcccCCChHHHHHHHHHhc---CC--------hHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCc
Confidence 9999999999887788999999999999996 33 57899999999999999999999876678888889
Q ss_pred cccccccccCCCCCceEEeecCc-------------c-HHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHH
Q 012785 382 QFCTFLGRAFEPQPAFAWLKCEQ-------------E-IEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLF 447 (456)
Q Consensus 382 ~~~~~~~~~~~~~~~f~~~~~~~-------------~-~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~ 447 (456)
++ |+|++++. + .+.+..+++++||.++||+.||. .+++||+|+.++|+++++
T Consensus 325 g~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~-~~~iRis~~~~~e~l~~~ 390 (402)
T PRK06107 325 AF-------------YLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGL-SPYFRLSIATSLETLEEA 390 (402)
T ss_pred ce-------------EEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCC-CCeEEEEeCCCHHHHHHH
Confidence 88 89998631 2 34456777899999999999986 689999999899999999
Q ss_pred HHHHHhhh
Q 012785 448 VQRLSKIL 455 (456)
Q Consensus 448 l~~L~~~l 455 (456)
+++|++++
T Consensus 391 l~~l~~~l 398 (402)
T PRK06107 391 CARIERAV 398 (402)
T ss_pred HHHHHHHH
Confidence 99999876
No 44
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=5.1e-43 Score=352.28 Aligned_cols=326 Identities=19% Similarity=0.269 Sum_probs=260.6
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEcc
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGT 170 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~ 170 (456)
.++++++|+.|+|++++++.+.+... ..+... ...|++..| .++||+++|+|++. +|..+. +++|++|+
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~-~~~~~~---~~~Y~~~~g-----~~~lr~~ia~~~~~~~~~~~~-~~~i~~t~ 97 (388)
T PRK07337 28 AGRDIIHMGIGEPDFTAPEPVVEAAA-RALRRG---VTQYTSALG-----LAPLREAIAAWYARRFGLDVA-PERIVVTA 97 (388)
T ss_pred cCCCEEEeCCcCCCCCCCHHHHHHHH-HHHhcC---CCCCCCCCC-----CHHHHHHHHHHHHHHhCCCCC-hHhEEEec
Confidence 45688999999999876654443221 112222 346888888 59999999999964 566664 57999999
Q ss_pred CHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc--------cccc---CCCeEEEEcCCC
Q 012785 171 GSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK--------RFNK---DGPYIELVTSPN 239 (456)
Q Consensus 171 G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~--------~l~~---~~~~~i~v~~P~ 239 (456)
|+++++.+++.+++++|| +|++++|+|+.+...++..|++++.++.|.+ .++. .+++++++++||
T Consensus 98 G~~~al~~~~~~l~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~ 173 (388)
T PRK07337 98 GASAALLLACLALVERGD----EVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPS 173 (388)
T ss_pred CcHHHHHHHHHHhcCCCC----EEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCC
Confidence 999999999999999999 9999999999999999999999987776532 2222 367899999999
Q ss_pred CCCcccchH--------HhhhcCcEEEeeecCCCCCCC----CCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHH
Q 012785 240 NPDGSVRQS--------VVNRSGGILVHDLAYYWPQYT----SITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAK 307 (456)
Q Consensus 240 NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~~----~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~ 307 (456)
||||.+++. +|+++++++|+||+|.+..+. +.....+++|+++||||.||+||+|+||++++ +++++
T Consensus 174 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~-~~l~~ 252 (388)
T PRK07337 174 NPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVP-EALVG 252 (388)
T ss_pred CCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecC-HHHHH
Confidence 999999982 678899999999999864332 22233578999999999999999999999997 89999
Q ss_pred HHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccc
Q 012785 308 KMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFL 387 (456)
Q Consensus 308 ~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~ 387 (456)
++.+.......+++.+.|.++..++. ++. .+++++.++.++++++.+.+.|++.+......|.|++
T Consensus 253 ~l~~~~~~~~~~~s~~~q~~~~~~l~---~~~-------~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~---- 318 (388)
T PRK07337 253 TFEKLAQNLFICASALAQHAALACFE---PDT-------LAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAF---- 318 (388)
T ss_pred HHHHHHHHhccCCChHHHHHHHHHhc---cCc-------hHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeE----
Confidence 99988776677889999999998886 331 2456788999999999999999987532224567777
Q ss_pred cccCCCCCceEEeecCc-------cHHH-HHHHHHhCCEEeecCCCCCC--CCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 388 GRAFEPQPAFAWLKCEQ-------EIED-CESFLKGNKILTRSGKHFGF--SPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 388 ~~~~~~~~~f~~~~~~~-------~~~~-~~~~l~~~gI~v~pg~~fg~--~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
|+|++++. +..+ +.++++++||.+.||+.|+. .++++||+++.+++++++++++|++++
T Consensus 319 ---------f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 319 ---------YVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLF 387 (388)
T ss_pred ---------EEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 99999862 3344 44567889999999999975 468999999888999999999999875
No 45
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=4.3e-43 Score=354.29 Aligned_cols=327 Identities=15% Similarity=0.187 Sum_probs=254.9
Q ss_pred CCCCeEEecCCCCC----CCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEE
Q 012785 92 GGERIINVDHGDPT----MYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIV 167 (456)
Q Consensus 92 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~ 167 (456)
.++++++|+.|+|+ +++++.+.+... ..+... ....|++..| .++||++++++++..+... ++++|+
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~-~~~~~~--~~~~Y~~~~g-----~~~lr~aia~~~~~~~~~~-~~~~i~ 99 (401)
T TIGR01264 29 PEKPMIKLSIGDPTVFGNLPTDPEVMQAMK-DSLDSG--KYNGYAPTVG-----ALSAREAIASYYHNPDGPI-EADDVV 99 (401)
T ss_pred cCCCeeecCCCCCCCcCCCCCCHHHHHHHH-HHHhcc--CCCCCCCCCC-----CHHHHHHHHHHHhhcCCCC-CHHHEE
Confidence 34688999999985 554544443221 112222 1345888888 5999999999998766665 467999
Q ss_pred EccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC--------cccccc---CCCeEEEEc
Q 012785 168 VGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD--------AKRFNK---DGPYIELVT 236 (456)
Q Consensus 168 ~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d--------~~~l~~---~~~~~i~v~ 236 (456)
+|+|+++++.+++.+++++|| +|++++|+|+.+...++..|++++.++++ .+.++. .++++++++
T Consensus 100 ~t~G~~~al~~~~~~l~~~gd----~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~ 175 (401)
T TIGR01264 100 LCSGCSHAIEMCIAALANAGQ----NILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVN 175 (401)
T ss_pred ECcChHHHHHHHHHHhCCCCC----EEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEEc
Confidence 999999999999999999999 99999999999999999999998876553 233322 356899999
Q ss_pred CCCCCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCCCC--CCCcEEEecCccccCCCCceEEEEEEe
Q 012785 237 SPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSITYP--ADHDLMLFTVSKSTGHAGTRIGWALVK 301 (456)
Q Consensus 237 ~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~~~--~~~~i~i~S~SK~~g~~G~RiG~l~~~ 301 (456)
|||||||.+++. +|++++++||+||+|.+..+ .++... ..++|+++||||.|++||+|+||++++
T Consensus 176 ~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~ 255 (401)
T TIGR01264 176 NPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIH 255 (401)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEec
Confidence 999999999872 67889999999999986332 222222 235899999999999999999999997
Q ss_pred CH-----HHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q 012785 302 DM-----EVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSV 376 (456)
Q Consensus 302 ~~-----~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~ 376 (456)
++ ++++.+..... ...+++.+.|.++..+|. +. .++++++.++.++++|+.+.+.|++++++.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~---~~-------~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~ 324 (401)
T TIGR01264 256 DRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILL---RT-------PQEYFDGTLSVLESNAMLCYGALAAVPGLRP 324 (401)
T ss_pred CcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHH---hC-------cHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 42 34455544432 356789999999999997 22 2679999999999999999999998755666
Q ss_pred cCCCCcccccccccCCCCCceEEeecCc-------cHHHH-HHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHH
Q 012785 377 PELPSQFCTFLGRAFEPQPAFAWLKCEQ-------EIEDC-ESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFV 448 (456)
Q Consensus 377 ~~~~g~~~~~~~~~~~~~~~f~~~~~~~-------~~~~~-~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l 448 (456)
..|+||+ |+|++++. +...+ ..+++++||.++||+.|+. ++++||+++.+++++++++
T Consensus 325 ~~p~~g~-------------f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~-~~~iRis~~~~~~~l~~~l 390 (401)
T TIGR01264 325 VMPSGAM-------------YMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEY-PGFFRVVLTVPVVMMEEAC 390 (401)
T ss_pred cCCCeee-------------EEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCC-CCeEEEEEcCCHHHHHHHH
Confidence 6777777 99999742 23444 4455689999999999974 7899999988889999999
Q ss_pred HHHHhhhC
Q 012785 449 QRLSKILS 456 (456)
Q Consensus 449 ~~L~~~l~ 456 (456)
++|+++++
T Consensus 391 ~rl~~~~~ 398 (401)
T TIGR01264 391 SRIQEFCE 398 (401)
T ss_pred HHHHHHHh
Confidence 99998763
No 46
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=7.4e-43 Score=351.00 Aligned_cols=325 Identities=16% Similarity=0.184 Sum_probs=260.7
Q ss_pred CCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccC
Q 012785 93 GERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTG 171 (456)
Q Consensus 93 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G 171 (456)
...+++|+.|.|+.+.|+.+.+... ..+..+ ...|++..| .++||++++++++. +|....+.++|++|+|
T Consensus 25 ~~~~i~l~~g~p~~~~p~~~~~~~~-~~~~~~---~~~Y~~~~G-----~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G 95 (387)
T PRK08912 25 EHGAINLGQGFPDDPGPEDVRRAAA-DALLDG---SNQYPPMMG-----LPELRQAVAAHYARFQGLDLDPETEVMVTSG 95 (387)
T ss_pred hCCeEEccCCCCCCCCCHHHHHHHH-HHHhcC---CCCCCCCCC-----cHHHHHHHHHHHHHHhCCCCCCcccEEEeCC
Confidence 3578999999998875544433211 112222 346999999 59999999999964 5666653339999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc-------ccccc---CCCeEEEEcCCCCC
Q 012785 172 STQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA-------KRFNK---DGPYIELVTSPNNP 241 (456)
Q Consensus 172 ~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~-------~~l~~---~~~~~i~v~~P~NP 241 (456)
+++++.+++.+++++|| +|++++|+|+.+...++..|++++.++.|. +.++. .++++++++|||||
T Consensus 96 ~~~al~~~~~~~~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NP 171 (387)
T PRK08912 96 ATEALAAALLALVEPGD----EVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNPLNP 171 (387)
T ss_pred cHHHHHHHHHHhcCCCC----EEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCccceEEEEeCCCCC
Confidence 99999999999999999 999999999999999999999988776643 23322 36789999999999
Q ss_pred CcccchH--------HhhhcCcEEEeeecCCCCC-----CCCCC---CCCCCcEEEecCccccCCCCceEEEEEEeCHHH
Q 012785 242 DGSVRQS--------VVNRSGGILVHDLAYYWPQ-----YTSIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEV 305 (456)
Q Consensus 242 tG~~~~~--------l~~~~~~~iI~De~y~~~~-----~~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~ 305 (456)
||.+++. +|+++++++|+||+|.+.. +.++. ...+++|+++||||.||++|+|+||++++ +++
T Consensus 172 tG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~-~~~ 250 (387)
T PRK08912 172 AGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAA-PPL 250 (387)
T ss_pred cCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecC-HHH
Confidence 9999882 6889999999999997422 22322 22468999999999999999999999996 999
Q ss_pred HHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccc
Q 012785 306 AKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCT 385 (456)
Q Consensus 306 ~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~ 385 (456)
++.+.+......++.++..|.++...|. .. ++++++.++.++++++.+.+.|+..+ +.+.++.|++
T Consensus 251 ~~~l~~~~~~~~~~~~~~~q~~~~~~l~---~~--------~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~g~~-- 316 (387)
T PRK08912 251 LRVLAKAHQFLTFTTPPNLQAAVAYGLG---KP--------DDYFEGMRADLARSRDRLAAGLRRIG-FPVLPSQGTY-- 316 (387)
T ss_pred HHHHHHHHhhccccCChHHHHHHHHHHh---CC--------HHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCcce--
Confidence 9999888776678888889999888886 22 57889999999999999999999875 6677777887
Q ss_pred cccccCCCCCceEEeecCc-----cHHHHHHH-HHhCCEEeecCCCCCC---CCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 386 FLGRAFEPQPAFAWLKCEQ-----EIEDCESF-LKGNKILTRSGKHFGF---SPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 386 ~~~~~~~~~~~f~~~~~~~-----~~~~~~~~-l~~~gI~v~pg~~fg~---~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
|+|++++. +...+.+. ++++||.+.||..|+. ..+++||+|+.+++++++++++|+++++
T Consensus 317 -----------~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 317 -----------FLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAARR 385 (387)
T ss_pred -----------EEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 89999853 34445554 5678999999999953 3689999998889999999999998763
No 47
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.3e-42 Score=349.47 Aligned_cols=323 Identities=20% Similarity=0.274 Sum_probs=260.3
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccCH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTGS 172 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G~ 172 (456)
+++|+|+.|+|++.+++.+.+... ..+... ...|++..| .++||++++++++. +|....++++|++|+|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~-~~~~~~---~~~Y~~~~g-----~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~ 100 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAK-RAIDAN---QSHYTGMAG-----LLELRQAAADFVKEKYNLDYAPENEILVTIGA 100 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHH-HHHhcC---CCCCCCCCC-----cHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCh
Confidence 578999999999876654443211 112221 246888888 59999999999964 67766655799999999
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc-------ccccc------CCCeEEEEcCCC
Q 012785 173 TQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA-------KRFNK------DGPYIELVTSPN 239 (456)
Q Consensus 173 ~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~-------~~l~~------~~~~~i~v~~P~ 239 (456)
++++++++++++.+|| +|++++|+|+.+...++..|.+++.++.|. +.++. .+++++++++||
T Consensus 101 ~~al~~~~~~~~~~gd----~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~ 176 (391)
T PRK07309 101 TEALSASLTAILEPGD----KVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPA 176 (391)
T ss_pred HHHHHHHHHHhcCCCC----EEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCC
Confidence 9999999999999999 999999999999999999999988776543 33321 247899999999
Q ss_pred CCCcccch--------HHhhhcCcEEEeeecCCCCCC-----CCCC-CCCCCcEEEecCccccCCCCceEEEEEEeCHHH
Q 012785 240 NPDGSVRQ--------SVVNRSGGILVHDLAYYWPQY-----TSIT-YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEV 305 (456)
Q Consensus 240 NPtG~~~~--------~l~~~~~~~iI~De~y~~~~~-----~~~~-~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~ 305 (456)
||||.+++ ++|+++++++|+||+|.+..+ .++. ...+++|+++||||.||+||+|+||++++ +++
T Consensus 177 NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~-~~~ 255 (391)
T PRK07309 177 NPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAP-AEF 255 (391)
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeC-HHH
Confidence 99999987 267899999999999986332 1221 23578999999999999999999999997 999
Q ss_pred HHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccc
Q 012785 306 AKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCT 385 (456)
Q Consensus 306 ~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~ 385 (456)
++++.........+++.+.|.++..+|+ ++ ..+....++.++++++.+.+.|++.+ +.+..|.|++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~--------~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~p~gg~-- 321 (391)
T PRK07309 256 TAQLIKSHQYLVTAATTMAQFAAVEALT---NG--------KDDALPMKKEYIKRRDYIIEKMTDLG-FKIIKPDGAF-- 321 (391)
T ss_pred HHHHHHHHhhcccCCChHHHHHHHHHHh---CC--------hhHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCeeE--
Confidence 9999887665667889999999999987 33 23456778899999999999999875 6777788887
Q ss_pred cccccCCCCCceEEeecCc----cHHHHH-HHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 386 FLGRAFEPQPAFAWLKCEQ----EIEDCE-SFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 386 ~~~~~~~~~~~f~~~~~~~----~~~~~~-~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
|+|++++. +...+. ++++++||.+.||..|+. ++++|||+++.+++++++++++|++++
T Consensus 322 -----------~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~~~~ 386 (391)
T PRK07309 322 -----------YIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLKEYM 386 (391)
T ss_pred -----------EEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 89998863 234444 567789999999999975 578999999888899999999999876
No 48
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=1.2e-42 Score=350.60 Aligned_cols=327 Identities=18% Similarity=0.233 Sum_probs=259.0
Q ss_pred cCCCCeEEecCCCC---CCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceE
Q 012785 91 DGGERIINVDHGDP---TMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHI 166 (456)
Q Consensus 91 ~~~~~~i~l~~g~p---~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I 166 (456)
..+.++|+|+.|+| ++++++.+.+... ..+... ...|++..| .++||+++++|++. +|.... +++|
T Consensus 27 ~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~-~~~~~~---~~~Y~~~~g-----~~~lr~~ia~~~~~~~g~~~~-~~~i 96 (398)
T PRK08363 27 KKGIKVIRLNIGDPVKFDFQPPEHMKEAYC-RAIKEG---HNYYGPSEG-----LPELREAIVKREKRKNGVDIT-PDDV 96 (398)
T ss_pred hcCCCeEEEeCCCCCcCCCCCCHHHHHHHH-HHHHcC---CCCCCCCCC-----cHHHHHHHHHHHHHhcCCCCC-hhhE
Confidence 45678999999999 5666665554322 122222 246888888 59999999999965 465564 5799
Q ss_pred EEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeee-ccCc-------ccccc---CCCeEEEE
Q 012785 167 VVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKW-AGDA-------KRFNK---DGPYIELV 235 (456)
Q Consensus 167 ~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~-~~d~-------~~l~~---~~~~~i~v 235 (456)
++|+|+++++.+++.+++++|| +|++++|+|+.+...++..|.+++.+ +.|. +.++. .+++++++
T Consensus 97 ~it~G~~~al~~~~~~~~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l 172 (398)
T PRK08363 97 RVTAAVTEALQLIFGALLDPGD----EILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAV 172 (398)
T ss_pred EEeCCHHHHHHHHHHHhCCCCC----EEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEE
Confidence 9999999999999999999999 99999999999999999999988776 3333 23322 35789999
Q ss_pred cCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCCC----CCC--CCCCCcEEEecCccccCCCCceEEEEEE-
Q 012785 236 TSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQYT----SIT--YPADHDLMLFTVSKSTGHAGTRIGWALV- 300 (456)
Q Consensus 236 ~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~~----~~~--~~~~~~i~i~S~SK~~g~~G~RiG~l~~- 300 (456)
+|||||||.+++. +|+++++++|+||+|.+..+. ++. ...+++|+++||||.|++||+|+||+++
T Consensus 173 ~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~ 252 (398)
T PRK08363 173 INPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFV 252 (398)
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEe
Confidence 9999999999872 678899999999999853221 211 2235799999999999999999999998
Q ss_pred eCHHHHHHHHHHHhh---ccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q 012785 301 KDMEVAKKMTKYIEL---NTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVP 377 (456)
Q Consensus 301 ~~~~~~~~l~~~~~~---~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~ 377 (456)
.++++++.+.+.... ..+++|.+.|.++..+|. +. ++++++.++.++++++.+.+.|++++++.+.
T Consensus 253 ~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~---~~--------~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~ 321 (398)
T PRK08363 253 DPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLT---GP--------MDYLEEYMKKLKERRDYIYKRLNEIPGISTT 321 (398)
T ss_pred CcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHh---CC--------hHHHHHHHHHHHHHHHHHHHHHhcCCCCEec
Confidence 226777766655321 246789999999999987 22 6789999999999999999999987667777
Q ss_pred CCCCcccccccccCCCCCceEEeecCc-----cHHHHHHHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHH
Q 012785 378 ELPSQFCTFLGRAFEPQPAFAWLKCEQ-----EIEDCESFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRL 451 (456)
Q Consensus 378 ~~~g~~~~~~~~~~~~~~~f~~~~~~~-----~~~~~~~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L 451 (456)
.|.|++ |+|++++. +.+.+.++++++||.++||+.|+. +++++||+++.+++++++++++|
T Consensus 322 ~p~g~~-------------~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l 388 (398)
T PRK08363 322 KPQGAF-------------YIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRF 388 (398)
T ss_pred CCCeEE-------------EEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHH
Confidence 788888 89988753 344566778999999999999975 46899999977889999999999
Q ss_pred Hhhh
Q 012785 452 SKIL 455 (456)
Q Consensus 452 ~~~l 455 (456)
++++
T Consensus 389 ~~~~ 392 (398)
T PRK08363 389 EEFM 392 (398)
T ss_pred HHHH
Confidence 9875
No 49
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=6.8e-43 Score=350.98 Aligned_cols=323 Identities=16% Similarity=0.259 Sum_probs=261.8
Q ss_pred CCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccC
Q 012785 93 GERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTG 171 (456)
Q Consensus 93 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G 171 (456)
+.++|+|+.|+|+++.++.+.+... ..+... ...|++..| .++||+++++++.. +|....++++|++|+|
T Consensus 29 ~~~~i~l~~g~~~~~~~~~~~~~~~-~~~~~~---~~~Y~~~~G-----~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G 99 (386)
T PRK09082 29 EHGAINLSQGFPDFDGPPYLVEALA-YAMAAG---HNQYPPMTG-----VAALREAIAAKTARLYGRQYDADSEITVTAG 99 (386)
T ss_pred hCCEEEecCCCCCCCCCHHHHHHHH-HHHHcC---CCCCCCCCC-----cHHHHHHHHHHHHHHhCCCCCCCCcEEEeCC
Confidence 4578999999999876655543321 112222 246888888 59999999999865 4666544458999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc-------ccccc---CCCeEEEEcCCCCC
Q 012785 172 STQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA-------KRFNK---DGPYIELVTSPNNP 241 (456)
Q Consensus 172 ~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~-------~~l~~---~~~~~i~v~~P~NP 241 (456)
+++++.+++.+++.+|| +|++++|+|+.+...++..|.+++.++.|. +.++. .+++++++++||||
T Consensus 100 ~~~al~~~~~~~~~~gd----~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NP 175 (386)
T PRK09082 100 ATEALFAAILALVRPGD----EVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNP 175 (386)
T ss_pred HHHHHHHHHHHHcCCCC----EEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCC
Confidence 99999999999999999 999999999999999999999998877653 23322 35789999999999
Q ss_pred Ccccch--------HHhhhcCcEEEeeecCCCCCC-----CCCC---CCCCCcEEEecCccccCCCCceEEEEEEeCHHH
Q 012785 242 DGSVRQ--------SVVNRSGGILVHDLAYYWPQY-----TSIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEV 305 (456)
Q Consensus 242 tG~~~~--------~l~~~~~~~iI~De~y~~~~~-----~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~ 305 (456)
||.+++ ++|+++++++|+||+|.+..+ .++. ...+++|+++||||.+|+||+|+||++++ +++
T Consensus 176 tG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~-~~l 254 (386)
T PRK09082 176 SGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAP-AAL 254 (386)
T ss_pred CCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCC-HHH
Confidence 999987 278999999999999975322 2221 23578999999999999999999999997 999
Q ss_pred HHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccc
Q 012785 306 AKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCT 385 (456)
Q Consensus 306 ~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~ 385 (456)
++.+++......++++.+.|.++..++. .. ++++++.++.++++++.+.+.|++.+ +.+.++.|++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~--------~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~g~~-- 320 (386)
T PRK09082 255 SAEFRKVHQYNTFTVNTPAQLALADYLR---AE--------PEHYLELPAFYQAKRDRFRAALANSR-FKLLPCEGTY-- 320 (386)
T ss_pred HHHHHHHHhhhcCCCChHHHHHHHHHHh---CC--------hHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCeeE--
Confidence 9999998877788999999999998886 22 67888999999999999999999864 6677778887
Q ss_pred cccccCCCCCceEEeecCc----cHHHHHH-HHHhCCEEeecCCCCCC---CCCeEEEEecCChhHHHHHHHHHHhh
Q 012785 386 FLGRAFEPQPAFAWLKCEQ----EIEDCES-FLKGNKILTRSGKHFGF---SPKYVRISMLDRDENYNLFVQRLSKI 454 (456)
Q Consensus 386 ~~~~~~~~~~~f~~~~~~~----~~~~~~~-~l~~~gI~v~pg~~fg~---~~~~iRis~~~~~e~i~~~l~~L~~~ 454 (456)
|+|++++. +..++.+ +++++||.+.||+.|+. +.+++||+++.+++++++++++|+++
T Consensus 321 -----------~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~~ 386 (386)
T PRK09082 321 -----------FQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQL 386 (386)
T ss_pred -----------EEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhhC
Confidence 89999862 3445544 56899999999999952 46799999988899999999999863
No 50
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=1.1e-42 Score=351.17 Aligned_cols=325 Identities=20% Similarity=0.212 Sum_probs=245.6
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccC--ccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEc
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPG--WQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVG 169 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~--~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t 169 (456)
.+.++|+|+.|+|++++++.+.+... ..+... ......|.+..| .++||+++|+++...+ + ++++|++|
T Consensus 31 ~~~~~i~l~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~Y~p~~g-----~~~lr~aia~~~~~~~--~-~~d~I~it 101 (402)
T TIGR03542 31 PSADIIRLGIGDTTQPLPASVIEAFH-NAVDELASEETFRGYGPEQG-----YPFLREAIAENDYRGR--I-DPEEIFIS 101 (402)
T ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHH-HHHhcccccccccCCCCCCC-----CHHHHHHHHHHHHhcC--C-CHHHEEEC
Confidence 35689999999999877665444322 111111 012345877788 5999999999863322 3 46899999
Q ss_pred cCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCC-----------eEeeeccCcc-ccc-----cCCCeE
Q 012785 170 TGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKS-----------RLYKWAGDAK-RFN-----KDGPYI 232 (456)
Q Consensus 170 ~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~-----------~~~~~~~d~~-~l~-----~~~~~~ 232 (456)
+|+++++..++ .++.+|| +|++++|+|+.|...++..|+ +++.++.|.+ ++. ..++++
T Consensus 102 ~Ga~~al~~l~-~l~~~gd----~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 176 (402)
T TIGR03542 102 DGAKCDVFRLQ-SLFGSDN----TVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEEPKIDI 176 (402)
T ss_pred CCcHHHHHHHH-HhcCCCC----EEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccccCCceE
Confidence 99999999875 5568899 999999999999999999999 8888877542 232 135789
Q ss_pred EEEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCC---CCCCCcEEEecCccccCCCCceEE
Q 012785 233 ELVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSIT---YPADHDLMLFTVSKSTGHAGTRIG 296 (456)
Q Consensus 233 i~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~---~~~~~~i~i~S~SK~~g~~G~RiG 296 (456)
++++|||||||.+++. +|++++++||+||+|.+..+ .++. ...+++|+++||||.||+||+|+|
T Consensus 177 i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG 256 (402)
T TIGR03542 177 IYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLG 256 (402)
T ss_pred EEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceE
Confidence 9999999999999993 67889999999999985321 1221 123578999999999999999999
Q ss_pred EEEEeCHHHH--------HHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 012785 297 WALVKDMEVA--------KKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAV 368 (456)
Q Consensus 297 ~l~~~~~~~~--------~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L 368 (456)
|++++ ++++ +.+.........++|.+.|.++..++. ++. .+++.+.++.++++++.+.+.|
T Consensus 257 ~~i~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~---~~~-------~~~~~~~~~~~~~~~~~~~~~L 325 (402)
T TIGR03542 257 WTVVP-KELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYA---GEG-------LQPILEAISYYMENARILRKAL 325 (402)
T ss_pred EEEec-HHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHc---Ccc-------hhHHHHHHHHHHHHHHHHHHHH
Confidence 99997 7776 222222222344689999999888887 321 2456677889999999999999
Q ss_pred HhcCCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHH-HHHhCCEEeecCCCCCC-CCCeEEEEecCChhHH
Q 012785 369 QKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCES-FLKGNKILTRSGKHFGF-SPKYVRISMLDRDENY 444 (456)
Q Consensus 369 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~-~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i 444 (456)
++.+ +++..+.|++ |+|++++. +.+.+.+ +++++||.++||+.|+. +.+++||+++.+++++
T Consensus 326 ~~~~-~~~~~~~~~~-------------f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l 391 (402)
T TIGR03542 326 EAAG-FKVYGGEHAP-------------YLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENI 391 (402)
T ss_pred HhcC-ceecCCCcee-------------EEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHH
Confidence 8864 5555555665 99999975 3444444 55678999999999975 4689999987789999
Q ss_pred HHHHHHHHhhh
Q 012785 445 NLFVQRLSKIL 455 (456)
Q Consensus 445 ~~~l~~L~~~l 455 (456)
++++++|++.|
T Consensus 392 ~~~l~~l~~~~ 402 (402)
T TIGR03542 392 VEACERIKEAL 402 (402)
T ss_pred HHHHHHHHhhC
Confidence 99999999864
No 51
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3e-43 Score=358.50 Aligned_cols=399 Identities=14% Similarity=0.163 Sum_probs=280.8
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHhcCccCCCCchhhHHHHhh----hhhccccCCCceeecccccccccCCCCCCcc-c
Q 012785 6 PLFSLKNLLVVSLALNVSLIWRAMHESEKCNFDSSFSLQQQRR----SVMAGCVLKEKEHVSERTHLSLSSSPSPSPS-S 80 (456)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~----~~~~~c~~~g~~~~~~~~~~~~~~~~~~~~~-~ 80 (456)
|.|-+|+.| ..++-.++. ...|+-|+-+|.|-.....||=- =|...|...+.. ++ ++ ++.+... .
T Consensus 10 s~fe~~~~~-~~~a~~~~~-~~~l~agrgnpn~~~~~~r~af~~~~~f~~~e~~~~~~~--~~----~~--~g~~~~~g~ 79 (527)
T PRK09275 10 SPFELKDEL-IKLAKSKSA-RLMLNAGRGNPNWLATTPREAFFRLGQFAVEESRRSWSY--PG----GL--GGMPQKEGI 79 (527)
T ss_pred CcHHHHHHH-HHHHhcccc-ceeecCCCCCcccccCCHHHHHHHHHHHHHHHHHHhhcc--CC----Cc--CCCcccccH
Confidence 578899988 666644332 34455788889997666554432 122233333322 21 11 1111111 2
Q ss_pred cccccchhhhcCC-------CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHH
Q 012785 81 SLTSTDIQSQDGG-------ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLH 153 (456)
Q Consensus 81 ~~~~~~~~~~~~~-------~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~ 153 (456)
..++...+....+ .++|+|+.|+|++++|+++.+. . ..+. + ..|+++.| .++||++|++++
T Consensus 80 ~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~~~~~~~v~e~-~-~~~~-~----~~Y~~~~g-----~~~lreaia~~~ 147 (527)
T PRK09275 80 EERFEAFLEEHKDVPGIDFLRDAVSYVRDQLGFDADEFVYEL-V-DGII-G----DNYPVPDR-----MLKHTEKIVKDY 147 (527)
T ss_pred HHHHHHHHHhCCCCchHHHHHHHHhhcCCCCCCCCCHHHHHH-H-HHHh-c----CCCCCCCC-----CHHHHHHHHHHH
Confidence 2232222111111 2579999999999998887762 2 2222 2 14999999 499999999855
Q ss_pred -HHh-cCccCC--CceEEEccCHHHHHHHHHHH-----hcCCCCCCCcEEEEeCCCCCChhhhhhhcC--CeEeeecc--
Q 012785 154 -KVV-GNAITE--NHHIVVGTGSTQLFQAALYA-----LSSQDASEPISVVSAAPYYSSYPSITDCVK--SRLYKWAG-- 220 (456)
Q Consensus 154 -~~~-g~~~~~--~~~I~~t~G~~~al~~~~~~-----l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g--~~~~~~~~-- 220 (456)
.+. +....+ +++|++|+|+++++..++.+ ++++|| +|++++|+|+.|...++..| .+++.++.
T Consensus 148 ~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD----~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~ 223 (527)
T PRK09275 148 LRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGD----KIALMTPIFTPYLEIPELPRYDLEVVHINADE 223 (527)
T ss_pred HHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCC----EEEEeCCChHHHHHHHHHcCCCeEEEEeecCc
Confidence 432 222222 35899999999999999886 689999 99999999999999988875 45555443
Q ss_pred ------Ccccccc---CCCeEEEEcCCCCCCcccchH--------Hhh--hcCcEEEeeecCCCCC--CCCCC-CCCCCc
Q 012785 221 ------DAKRFNK---DGPYIELVTSPNNPDGSVRQS--------VVN--RSGGILVHDLAYYWPQ--YTSIT-YPADHD 278 (456)
Q Consensus 221 ------d~~~l~~---~~~~~i~v~~P~NPtG~~~~~--------l~~--~~~~~iI~De~y~~~~--~~~~~-~~~~~~ 278 (456)
|.+.++. .++++++++|||||||.++++ +|+ +++++||+||+|.+.. +.++. ..++++
T Consensus 224 ~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~ 303 (527)
T PRK09275 224 ENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNT 303 (527)
T ss_pred ccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCE
Confidence 2333332 367999999999999999993 574 3599999999998632 22222 245799
Q ss_pred EEEecCccccCCCCceEEEEEEeCHH----HHHHH--------------------------------HHHHhhccCcCCh
Q 012785 279 LMLFTVSKSTGHAGTRIGWALVKDME----VAKKM--------------------------------TKYIELNTIGVSK 322 (456)
Q Consensus 279 i~i~S~SK~~g~~G~RiG~l~~~~~~----~~~~l--------------------------------~~~~~~~~~~~s~ 322 (456)
|+++||||.||++|||+||+++++++ +++.+ ++.....+.+.|.
T Consensus 304 I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~ 383 (527)
T PRK09275 304 ILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLST 383 (527)
T ss_pred EEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCC
Confidence 99999999999999999999998432 22222 4566667899999
Q ss_pred HHHHHHH-----HHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCce
Q 012785 323 DSQLRAA-----KVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAF 397 (456)
Q Consensus 323 ~~q~~a~-----~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f 397 (456)
+.|.+++ ++|+ .. +++++.+++.+++|++.+.+.|.. .+...+|.|+| |
T Consensus 384 p~Q~a~al~~~~all~---~~--------~~~~~~~~~~~~~Rr~~l~~~Lg~--~~~~~~p~g~f-------------Y 437 (527)
T PRK09275 384 PQQVQMALFSLFALLD---EE--------DAYKKAMKDIIRRRYKALYEGLGL--PEPEDPNNAAY-------------Y 437 (527)
T ss_pred HHHHHHHHHHHHHHHh---Cc--------hHHHHHHHHHHHHHHHHHHHHcCC--CCcCCCCCeeE-------------E
Confidence 9999732 3344 22 678999999999999999888832 13335688888 8
Q ss_pred EEeecCc-------------------cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC-ChhHHHHHHHHHHhhhC
Q 012785 398 AWLKCEQ-------------------EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD-RDENYNLFVQRLSKILS 456 (456)
Q Consensus 398 ~~~~~~~-------------------~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~-~~e~i~~~l~~L~~~l~ 456 (456)
+|++++. +.+.+.++++++||.+.||+.||..++++|||++. +++++.++.++|+++++
T Consensus 438 ~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~ 516 (527)
T PRK09275 438 TLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLD 516 (527)
T ss_pred EEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 8887741 34557788899999999999998767899999985 88999999999998863
No 52
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-42 Score=349.07 Aligned_cols=327 Identities=18% Similarity=0.269 Sum_probs=264.0
Q ss_pred CCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccC
Q 012785 93 GERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTG 171 (456)
Q Consensus 93 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G 171 (456)
...+|+|+.|+|++++++.+.+... ..+... ...|.+..| .++||+++|++++. +|..+. +++|++|+|
T Consensus 32 ~~~~i~l~~~~~~~~~~~~~~~~~~-~~~~~~---~~~Y~~~~g-----~~~lr~~ia~~~~~~~g~~~~-~~~i~~t~G 101 (391)
T PRK08361 32 MENVISLGIGEPDFDTPKNIKEAAK-RALDEG---WTHYTPNAG-----IPELREAIAEYYKKFYGVDVD-VDNVIVTAG 101 (391)
T ss_pred hcCeEEcCCCCCCCCCCHHHHHHHH-HHHhcC---CCCCCCCCC-----cHHHHHHHHHHHHHHhCCCCC-cccEEEeCC
Confidence 3568999999999876655443321 112222 235777788 59999999999964 466554 579999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc--------cccc---CCCeEEEEcCCCC
Q 012785 172 STQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK--------RFNK---DGPYIELVTSPNN 240 (456)
Q Consensus 172 ~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~--------~l~~---~~~~~i~v~~P~N 240 (456)
+++++.+++.+++++|| +|++++|+|+.+...++..|.+++.++.|.+ .++. .+++++++++|||
T Consensus 102 ~~~al~~~~~~l~~~g~----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~N 177 (391)
T PRK08361 102 AYEATYLAFESLLEEGD----EVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNN 177 (391)
T ss_pred hHHHHHHHHHHhcCCCC----EEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCC
Confidence 99999999999999999 9999999999999999999999988776543 2322 2578999999999
Q ss_pred CCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCC-CCCCCcEEEecCccccCCCCceEEEEEEeCHHHH
Q 012785 241 PDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSIT-YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVA 306 (456)
Q Consensus 241 PtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~-~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~ 306 (456)
|||.+++. +|+++++++|+||+|.+..+ .++. ...+++++++||||.||++|+|+||++++ ++++
T Consensus 178 PtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~-~~~~ 256 (391)
T PRK08361 178 PTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAP-EQVI 256 (391)
T ss_pred CCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccC-HHHH
Confidence 99999982 68899999999999985322 1221 23478999999999999999999999997 8999
Q ss_pred HHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccccc
Q 012785 307 KKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTF 386 (456)
Q Consensus 307 ~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~ 386 (456)
+.+.+.......+++.+.|.++..+|+ ++. ..+++++.++.++++++.+.+.|+.++++.+..|+|++
T Consensus 257 ~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~------~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~--- 324 (391)
T PRK08361 257 KDMIKLHAYIIGNVASFVQIAGIEALR---SKE------SWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAF--- 324 (391)
T ss_pred HHHHHHHhhhccCCChHHHHHHHHHhc---CCc------ccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEE---
Confidence 998887766678899999999999887 331 23688999999999999999999987667788888888
Q ss_pred ccccCCCCCceEEeecCc---cHHHHHHHH-HhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 387 LGRAFEPQPAFAWLKCEQ---EIEDCESFL-KGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 387 ~~~~~~~~~~f~~~~~~~---~~~~~~~~l-~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
|+|++++. +...+.+.+ +++||.+.||..|+. ++++|||+++.+++++++++++|+++++
T Consensus 325 ----------~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l~ 389 (391)
T PRK08361 325 ----------YVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAMERMEKALE 389 (391)
T ss_pred ----------EEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 89999863 345555555 578999999999974 4689999998888899999999998763
No 53
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=9.7e-43 Score=353.73 Aligned_cols=332 Identities=17% Similarity=0.293 Sum_probs=256.3
Q ss_pred hcCCCCeEEecCCCCCCCch---hHhhhcccccc----cccCccccccccCCCCcccCCCHHHHHHHHHHHHHh-cC--c
Q 012785 90 QDGGERIINVDHGDPTMYEK---YWQKVGDKTTI----VIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVV-GN--A 159 (456)
Q Consensus 90 ~~~~~~~i~l~~g~p~~~~~---~~~~~~~~~~~----~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~-g~--~ 159 (456)
..++.++|+|+..++.+... +|+........ -........+|.+..| .++||+++|++++.+ |. +
T Consensus 43 ~~np~g~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G-----~~~LR~aiA~~l~~~~~~~~~ 117 (447)
T PLN02607 43 SHNPSGVIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHG-----LKSFRQAMASFMEQIRGGKAR 117 (447)
T ss_pred ccCCCceEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcc-----hHHHHHHHHHHHHHhcCCCCC
Confidence 35667899999999876433 23332211000 0001223467888999 599999999999753 42 3
Q ss_pred cCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhh-hcCCeEeeeccCc--------ccccc---
Q 012785 160 ITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITD-CVKSRLYKWAGDA--------KRFNK--- 227 (456)
Q Consensus 160 ~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~-~~g~~~~~~~~d~--------~~l~~--- 227 (456)
+ ++++|++|+|+++++++++.+++++|| .|++++|+|+.+...+. ..|+++++++.+. +.++.
T Consensus 118 v-~p~~Ivit~G~t~al~~l~~~l~~pGD----~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~ 192 (447)
T PLN02607 118 F-DPDRIVLTAGATAANELLTFILADPGD----ALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQ 192 (447)
T ss_pred c-CHHHeEEcCChHHHHHHHHHHhCCCCC----EEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHH
Confidence 4 468999999999999999999999999 99999999999998777 4789888776542 23322
Q ss_pred ------CCCeEEEEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCC-----CCCCCC---------CCCCCcE
Q 012785 228 ------DGPYIELVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWP-----QYTSIT---------YPADHDL 279 (456)
Q Consensus 228 ------~~~~~i~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~-----~~~~~~---------~~~~~~i 279 (456)
.++++++++|||||||.++++ +|+++++++|+||+|.+. .+.++. ...++++
T Consensus 193 ~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~ 272 (447)
T PLN02607 193 EAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVH 272 (447)
T ss_pred HHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEE
Confidence 257899999999999999983 788999999999999852 233321 1146899
Q ss_pred EEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHH
Q 012785 280 MLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMST 359 (456)
Q Consensus 280 ~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~ 359 (456)
+++||||.||++|+|+||+++.++++++.++.... ...+|.+.|.++..+|+ ++.. .+++++..++++++
T Consensus 273 vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~--~~~~s~~~q~~~~~~L~---d~~~-----~~~~l~~~r~~l~~ 342 (447)
T PLN02607 273 IVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS--FTLVSSQTQHLLASMLS---DEEF-----TENYIRTNRERLRK 342 (447)
T ss_pred EEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHhh--cCCCCHHHHHHHHHHhC---Cchh-----HHHHHHHHHHHHHH
Confidence 99999999999999999999865788777766543 23578999999999998 4321 25788899999999
Q ss_pred HHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-------c-HHHHH-HHHHhCCEEeecCCCCCC-C
Q 012785 360 RWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-------E-IEDCE-SFLKGNKILTRSGKHFGF-S 429 (456)
Q Consensus 360 ~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-------~-~~~~~-~~l~~~gI~v~pg~~fg~-~ 429 (456)
+++.+.+.|++.+ +.+.++.||+ |+|++++. + ...+. ++++++||.+.||+.|+. .
T Consensus 343 ~~~~~~~~L~~~g-i~~~~~~ag~-------------fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~ 408 (447)
T PLN02607 343 RYEMIVQGLRRAG-IECLKGNAGL-------------FCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSE 408 (447)
T ss_pred HHHHHHHHHHhCC-CCcccCCeeE-------------EEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCC
Confidence 9999999999875 5677778888 99999853 1 22344 455678999999999974 5
Q ss_pred CCeEEEEecC-ChhHHHHHHHHHHhhh
Q 012785 430 PKYVRISMLD-RDENYNLFVQRLSKIL 455 (456)
Q Consensus 430 ~~~iRis~~~-~~e~i~~~l~~L~~~l 455 (456)
++|+||+|+. +++.++++++||++++
T Consensus 409 ~g~fRi~fa~~~~~~l~~gl~Ri~~~l 435 (447)
T PLN02607 409 PGWFRVCFANMSEDTLEVALKRIHRFM 435 (447)
T ss_pred CCEEEEEeccCCHHHHHHHHHHHHHHH
Confidence 8999999996 8999999999999876
No 54
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-42 Score=344.64 Aligned_cols=325 Identities=18% Similarity=0.240 Sum_probs=260.0
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccCH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTGS 172 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G~ 172 (456)
..+++|+.|+|++++++.+.++.. . ...... ...|++..| .+++|+++++++.. .|....++++|++|+|+
T Consensus 27 ~~~~~l~~g~~~~~~~~~~~~a~~-~-~~~~~~-~~~Y~~~~G-----~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~ 98 (389)
T PRK05957 27 PGTISLGQGVVSYPPPPEAIEALN-N-FLANPE-NHKYQAVQG-----IPPLLEAITQKLQQDNGIELNNEQAIVVTAGS 98 (389)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHH-H-HHhCCC-CCCCCCCCC-----CHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCh
Confidence 467999999999876655543321 1 111221 246888888 59999999999854 46655546789999999
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC------cccccc---CCCeEEEEcCCCCCCc
Q 012785 173 TQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD------AKRFNK---DGPYIELVTSPNNPDG 243 (456)
Q Consensus 173 ~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d------~~~l~~---~~~~~i~v~~P~NPtG 243 (456)
++++..++.+++.+|| +|++++|+|..+...++..|++++.++.| .+.++. .+++++++++||||||
T Consensus 99 ~~~l~~~~~~~~~~gd----~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG 174 (389)
T PRK05957 99 NMAFMNAILAITDPGD----EIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTG 174 (389)
T ss_pred HHHHHHHHHHhcCCCC----EEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCC
Confidence 9999999999999999 99999999999999999999998876654 334433 3678999999999999
Q ss_pred ccchH--------HhhhcCcEEEeeecCCCCCCC-----CC---CCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHH
Q 012785 244 SVRQS--------VVNRSGGILVHDLAYYWPQYT-----SI---TYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAK 307 (456)
Q Consensus 244 ~~~~~--------l~~~~~~~iI~De~y~~~~~~-----~~---~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~ 307 (456)
.+++. +|+++|+++|+||+|.+..+. +. ....+++|+++||||.||+||+|+||++++ +++++
T Consensus 175 ~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~-~~~~~ 253 (389)
T PRK05957 175 VVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIP-IHLLE 253 (389)
T ss_pred cCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecC-HHHHH
Confidence 99972 688999999999999853221 11 133458999999999999999999999997 99999
Q ss_pred HHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCC-ccccCCCCccccc
Q 012785 308 KMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGL-FSVPELPSQFCTF 386 (456)
Q Consensus 308 ~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~g~~~~~ 386 (456)
++.........+++.+.|.++..+|+ ++ ++++++.++.++++++.+.+.|+.++. +.+..+.|++
T Consensus 254 ~~~~~~~~~~~~~~~~~q~~~~~~l~---~~--------~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~--- 319 (389)
T PRK05957 254 AIKKIQDTILICPPVVSQYAALGALQ---VG--------KSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAF--- 319 (389)
T ss_pred HHHHHHhhcccCCCcHHHHHHHHHHh---CC--------hHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeE---
Confidence 99998876677889999999999887 33 467888888999999999999998754 3667777887
Q ss_pred ccccCCCCCceEEeecCc--cHHHHHHH-HHhCCEEeecCCCCCC-CCCeEEEEecC-ChhHHHHHHHHHHhhh
Q 012785 387 LGRAFEPQPAFAWLKCEQ--EIEDCESF-LKGNKILTRSGKHFGF-SPKYVRISMLD-RDENYNLFVQRLSKIL 455 (456)
Q Consensus 387 ~~~~~~~~~~f~~~~~~~--~~~~~~~~-l~~~gI~v~pg~~fg~-~~~~iRis~~~-~~e~i~~~l~~L~~~l 455 (456)
|+|++++. +..++.+. ++++||.++||+.|+. .++++||+++. +++++++++++|.+.+
T Consensus 320 ----------~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~ 383 (389)
T PRK05957 320 ----------YCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGL 383 (389)
T ss_pred ----------EEEEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHH
Confidence 89999853 34445554 5679999999999975 35799999975 8889999999998875
No 55
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.7e-42 Score=344.95 Aligned_cols=323 Identities=19% Similarity=0.273 Sum_probs=258.7
Q ss_pred CCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCH
Q 012785 93 GERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGS 172 (456)
Q Consensus 93 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~ 172 (456)
+..+++|+.|.|+++.++.+.+.... ... ....|++..| .++||+++++++...|.... +++|++|+|+
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~a~~~--~~~---~~~~Y~~~~g-----~~~lr~~ia~~~~~~~~~~~-~~~i~~t~G~ 97 (397)
T PRK07568 29 GIKVYHLNIGQPDIKTPEVFFEAIKN--YDE---EVLAYSHSQG-----IPELREAFAKYYKKWGIDVE-PDEILITNGG 97 (397)
T ss_pred CCCEEEecCCCCCCCCCHHHHHHHHH--Hhc---CCcCcCCCCC-----CHHHHHHHHHHHHHhCCCCC-cceEEEcCCh
Confidence 45789999999988766555433111 111 1345888888 59999999999987666654 5799999999
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc-cc--------ccc---CCCeEEEEcCCCC
Q 012785 173 TQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA-KR--------FNK---DGPYIELVTSPNN 240 (456)
Q Consensus 173 ~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~-~~--------l~~---~~~~~i~v~~P~N 240 (456)
++++.+++.+++++|| +|++++|+|+.+...++..|.+++.++.|. ++ ++. .+++++++++|||
T Consensus 98 ~~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~N 173 (397)
T PRK07568 98 SEAILFAMMAICDPGD----EILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGN 173 (397)
T ss_pred HHHHHHHHHHhcCCCC----EEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCC
Confidence 9999999999999999 999999999999999999999998887642 22 221 3578999999999
Q ss_pred CCcccch--------HHhhhcCcEEEeeecCCCCCC-----CCCC---CCCCCcEEEecCccccCCCCceEEEEEEeCHH
Q 012785 241 PDGSVRQ--------SVVNRSGGILVHDLAYYWPQY-----TSIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKDME 304 (456)
Q Consensus 241 PtG~~~~--------~l~~~~~~~iI~De~y~~~~~-----~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~ 304 (456)
|||.+++ ++|+++++++|+||+|.+..+ .++. ...+++|+++||||.||+||+|+||+++++++
T Consensus 174 PtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~ 253 (397)
T PRK07568 174 PTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKE 253 (397)
T ss_pred CCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHH
Confidence 9999987 267889999999999985322 1222 12578999999999999999999999986678
Q ss_pred HHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccc
Q 012785 305 VAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFC 384 (456)
Q Consensus 305 ~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~ 384 (456)
+++.+.+... ..+++|.+.|.++..+|+ .. ++++++.++.++++++.+.+.|++++++.+..|.|++
T Consensus 254 ~~~~~~~~~~-~~~~~s~~~q~~~~~~l~---~~--------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~- 320 (397)
T PRK07568 254 LIAAAMKLCQ-ARLSPPTLEQIGAAALLD---TP--------ESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAF- 320 (397)
T ss_pred HHHHHHHHhh-ccCCCCcHHHHHHHHHhh---CC--------HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcce-
Confidence 8888776543 357889999999999997 22 6789999999999999999999987667777788887
Q ss_pred ccccccCCCCCceEEeecCc-cHHHHHHHHHh------CCEEeecCCCCCC----CCCeEEEEecCChhHHHHHHHHHHh
Q 012785 385 TFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKG------NKILTRSGKHFGF----SPKYVRISMLDRDENYNLFVQRLSK 453 (456)
Q Consensus 385 ~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~------~gI~v~pg~~fg~----~~~~iRis~~~~~e~i~~~l~~L~~ 453 (456)
|+|++++. +.+.+.+.+.+ +||.+.||..|+. +++++||+|+.+++++++++++|++
T Consensus 321 ------------~~~~~l~~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~~~~l~~ 388 (397)
T PRK07568 321 ------------YIIAKLPVDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRAMEILKE 388 (397)
T ss_pred ------------EEEEecCCCCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHHHHHHHH
Confidence 89999964 34455554433 6999999999942 3579999998788999999999998
Q ss_pred hh
Q 012785 454 IL 455 (456)
Q Consensus 454 ~l 455 (456)
++
T Consensus 389 ~l 390 (397)
T PRK07568 389 AL 390 (397)
T ss_pred HH
Confidence 76
No 56
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.9e-42 Score=350.01 Aligned_cols=327 Identities=16% Similarity=0.203 Sum_probs=249.3
Q ss_pred CCeEEecCCCCCCCch--hHhhhcccccccccC-c-cccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEE
Q 012785 94 ERIINVDHGDPTMYEK--YWQKVGDKTTIVIPG-W-QSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVV 168 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~--~~~~~~~~~~~~~~~-~-~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~ 168 (456)
.++|+|+.|+|+..++ ..+..... ..+... . .....|++..| .++||++||+|+.. +|..+. +++|++
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Y~~~~G-----~~~LR~aia~~~~~~~g~~v~-~~~I~i 102 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLA-DLLASGKLTEALGNYDGPQG-----KDELIEALAALLNERYGWNIS-PQNIAL 102 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHH-HHhcCcccccccccCCCCCC-----CHHHHHHHHHHHHHHhCCCCC-hhhEEE
Confidence 5689999999985332 22222111 112111 1 22356999999 59999999999964 576664 679999
Q ss_pred ccCHHHHHHHHHHHhcC-----CCCCCCcEEEE-eCCCCCChhhhhhhcC------CeEee-------eccCccccc-cC
Q 012785 169 GTGSTQLFQAALYALSS-----QDASEPISVVS-AAPYYSSYPSITDCVK------SRLYK-------WAGDAKRFN-KD 228 (456)
Q Consensus 169 t~G~~~al~~~~~~l~~-----~gd~~~~~Vlv-~~P~y~~~~~~~~~~g------~~~~~-------~~~d~~~l~-~~ 228 (456)
|+|+++++.+++++++. +|| .|++ ++|+|+.|...+...+ .+++. +.+|.+.++ ..
T Consensus 103 t~Ga~~al~~~~~~l~~~~~~~~gd----~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 178 (416)
T PRK09440 103 TNGSQSAFFYLFNLFAGRRADGSLK----KILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLHIDE 178 (416)
T ss_pred ccChHHHHHHHHHHHhccccCCCCC----eEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcccCC
Confidence 99999999999999985 577 8999 7999999988655333 22221 334556664 23
Q ss_pred CCeEEEEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCC----CCCC-CCCCCCcEEEecCccccCCCCceE
Q 012785 229 GPYIELVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQ----YTSI-TYPADHDLMLFTVSKSTGHAGTRI 295 (456)
Q Consensus 229 ~~~~i~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~----~~~~-~~~~~~~i~i~S~SK~~g~~G~Ri 295 (456)
++++++++|||||||.+++. +|++++++||+||+|..+. +... +...+++|+++||||. ++||+|+
T Consensus 179 ~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRi 257 (416)
T PRK09440 179 DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-GLPGVRC 257 (416)
T ss_pred CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc-CCCcceE
Confidence 56899999999999999993 6889999999999997521 1111 1125789999999996 8999999
Q ss_pred EEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHH-HHHHHHHHHHHHHHHHHhc-C-
Q 012785 296 GWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEF-TNHQMSTRWKQLRMAVQKS-G- 372 (456)
Q Consensus 296 G~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~L~~~-~- 372 (456)
||++++ +++++++.........++|.+.|.++.++|+ ++. +.++..+ +++.++++++.+.+.|.+. +
T Consensus 258 G~~i~~-~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~---~~~------~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~ 327 (416)
T PRK09440 258 GIVIAD-EEIIEALSNMNGIISLAPGRLGPAIAAEMIE---SGD------LLRLSETVIRPFYRQKVQLAIALLRRYLPD 327 (416)
T ss_pred EEEeCC-HHHHHHHHHHHHHhccCCCcHHHHHHHHHhc---cch------HHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999996 9999999998877778899999999999997 441 2455544 6888999999999999764 2
Q ss_pred -CccccCCCCcccccccccCCCCCceEEeecCc---cHHHHHHHHHhCCEEeecCCCCCCC--------CCeEEEEecCC
Q 012785 373 -LFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ---EIEDCESFLKGNKILTRSGKHFGFS--------PKYVRISMLDR 440 (456)
Q Consensus 373 -~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~~l~~~gI~v~pg~~fg~~--------~~~iRis~~~~ 440 (456)
.+.+..|+|++ |+|++++. +...+.+.++++||.++||+.|+.+ .+++||+++.+
T Consensus 328 ~~~~~~~p~gg~-------------fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~ 394 (416)
T PRK09440 328 EPCLIHKPEGAI-------------FLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQD 394 (416)
T ss_pred CCeEEecCCCce-------------EEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecCC
Confidence 24456777777 99999864 4566777888999999999999531 35999999878
Q ss_pred hhHHHHHHHHHHhhh
Q 012785 441 DENYNLFVQRLSKIL 455 (456)
Q Consensus 441 ~e~i~~~l~~L~~~l 455 (456)
++++++++++|++++
T Consensus 395 ~~~l~~~i~~l~~~~ 409 (416)
T PRK09440 395 DEEIEKGIAILAEEV 409 (416)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999876
No 57
>PLN02231 alanine transaminase
Probab=100.00 E-value=3.2e-42 Score=355.65 Aligned_cols=332 Identities=17% Similarity=0.186 Sum_probs=255.9
Q ss_pred CCCeEEecCCCCCCCchhHhhhcccccccccC-ccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEcc
Q 012785 93 GERIINVDHGDPTMYEKYWQKVGDKTTIVIPG-WQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGT 170 (456)
Q Consensus 93 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~ 170 (456)
.+++|+|+.+.+.|+.. .+..+ . ..+... ......|++..| .++||++||+|+.. .|.+.. +++|++|+
T Consensus 128 ~p~~i~~~~~~~~fp~~-~i~~a-~-~~l~~~~~~~~~~Y~~s~G-----~~~lReaIA~~~~~r~g~~~~-pe~I~iT~ 198 (534)
T PLN02231 128 HPSLLDKSETHGLFSAD-AIERA-W-QILDQIPGRATGAYSHSQG-----IKGLRDAIAAGIEARDGFPAD-PNDIFLTD 198 (534)
T ss_pred CCccCCCCCccccCCHH-HHHHH-H-HHHHhcCCccccCcCCCCC-----cHHHHHHHHHHHHhccCCCCC-cccEEEeC
Confidence 35789999888888863 33322 1 222221 122456999999 59999999999965 466665 57999999
Q ss_pred CHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc--------cccc---C------CCeE
Q 012785 171 GSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK--------RFNK---D------GPYI 232 (456)
Q Consensus 171 G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~--------~l~~---~------~~~~ 232 (456)
|+++++.+++++|+. +|| .|+++.|+|+.|...++..|.+++.+++|.+ .++. . ++++
T Consensus 199 Ga~~ai~~~~~~l~~~~gd----~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ 274 (534)
T PLN02231 199 GASPAVHMMMQLLIRSEKD----GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRA 274 (534)
T ss_pred CHHHHHHHHHHHhccCCCC----EEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEE
Confidence 999999999999984 799 9999999999999999999999998877643 2221 1 4688
Q ss_pred EEEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCCC------CCCC------C---CCCcEEEecCcccc-
Q 012785 233 ELVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQYT------SITY------P---ADHDLMLFTVSKST- 288 (456)
Q Consensus 233 i~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~~------~~~~------~---~~~~i~i~S~SK~~- 288 (456)
++++|||||||.++++ +|++++++||+||+|.+..|. ++.. . ..++|+++||||.+
T Consensus 275 ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~ 354 (534)
T PLN02231 275 LVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYY 354 (534)
T ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccc
Confidence 9999999999999983 789999999999999864331 2111 1 12689999999976
Q ss_pred CCCCceEEEEEEe--CHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchh---HHHHHHHHHHHHHHH
Q 012785 289 GHAGTRIGWALVK--DMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDEC---FFEFTNHQMSTRWKQ 363 (456)
Q Consensus 289 g~~G~RiG~l~~~--~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~ 363 (456)
|++|+|+||++++ ++++++.+.+... ...+.+.+.|.++..+++....+. ..+++ +.+.+++.+++|++.
T Consensus 355 g~pGlRiGy~~~~~~~~~l~~~l~k~~~-~~~~s~~~~Q~~~~~~l~~p~~~~----~~y~~~~~~~~~i~~~~~~r~~~ 429 (534)
T PLN02231 355 GECGKRGGYMEVTGFTSDVREQIYKVAS-VNLCSNISGQILASLVMSPPKPGD----ESYESYMAEKDGILSSLARRAKT 429 (534)
T ss_pred cCCccceEEEEEecCCHHHHHHHHHHHh-hhcCCChHHHHHHHHHhCCCCCCc----chHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999873 4889999988765 456778889999888886211000 01233 344568899999999
Q ss_pred HHHHHHhcCCccccCCCCcccccccccCCCCCceEEeec--Ccc------------H-HHHHHHHHhCCEEeecCCCCCC
Q 012785 364 LRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKC--EQE------------I-EDCESFLKGNKILTRSGKHFGF 428 (456)
Q Consensus 364 l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~--~~~------------~-~~~~~~l~~~gI~v~pg~~fg~ 428 (456)
+.+.|++++++.+.+|+|+| |+|+++ +.. . ..+.++++++||.++||+.|+.
T Consensus 430 l~~~L~~~~gi~~~~p~Ggf-------------ylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~ 496 (534)
T PLN02231 430 LEDALNSLEGVTCNKAEGAM-------------YLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQ 496 (534)
T ss_pred HHHHHhcCCCceecCCCeee-------------EEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCC
Confidence 99999998778999999999 999554 321 1 2245577789999999999985
Q ss_pred --CCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 429 --SPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 429 --~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
+..+||+++..+++++++++++|++++
T Consensus 497 ~~g~~~~Rit~~~~~e~l~eal~RL~~~~ 525 (534)
T PLN02231 497 VPGTWHFRCTILPQEDKIPAIVSRLTEFH 525 (534)
T ss_pred CCCCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 455899999778999999999999875
No 58
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=341.71 Aligned_cols=325 Identities=18% Similarity=0.221 Sum_probs=259.5
Q ss_pred cCCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEc
Q 012785 91 DGGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVG 169 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t 169 (456)
..+...|+|+.|+|+..++..+.+... ..+... ....|++..| .++||++++++++. .|.... +++|++|
T Consensus 26 ~~~~~~i~l~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~Y~~~~G-----~~~lr~~ia~~~~~~~g~~~~-~~~i~~t 96 (386)
T PRK07550 26 GADGPLIDLSQAVPGYPPPPELLRALA-EAAADP--AAHLYGPVEG-----LPELREAYAAHYSRLYGAAIS-PEQVHIT 96 (386)
T ss_pred hcCCCeEEeCCCCCCCCCCHHHHHHHH-HHHhCc--CCcCCCCCCC-----CHHHHHHHHHHHHHHhCCCCC-cceEEEe
Confidence 345678999999998776554443322 111111 2346888888 59999999999965 465554 5799999
Q ss_pred cCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc-ccc-------cc---CCCeEEEEcCC
Q 012785 170 TGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA-KRF-------NK---DGPYIELVTSP 238 (456)
Q Consensus 170 ~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~-~~l-------~~---~~~~~i~v~~P 238 (456)
+|+++++.+++.+++.+|| +|++++|+|+.+...++..|++++.+++|. +++ +. .+++++++++|
T Consensus 97 ~G~~~al~~~~~~l~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P 172 (386)
T PRK07550 97 SGCNQAFWAAMVTLAGAGD----EVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTP 172 (386)
T ss_pred cCcHHHHHHHHHHhcCCCC----EEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCC
Confidence 9999999999999999999 999999999999999999999999888763 232 21 25688888899
Q ss_pred CCCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCC---CCCCCcEEEecCccccCCCCceEEEEEEeC
Q 012785 239 NNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKD 302 (456)
Q Consensus 239 ~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~ 302 (456)
|||||.+++. +|++++++||+||+|.+..+ .++. ...+++++++||||.+|++|+|+||++++
T Consensus 173 ~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~- 251 (386)
T PRK07550 173 NNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVAS- 251 (386)
T ss_pred CCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecC-
Confidence 9999999882 78899999999999975321 1111 12467999999999999999999999997
Q ss_pred HHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCc
Q 012785 303 MEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQ 382 (456)
Q Consensus 303 ~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~ 382 (456)
+++++.+.........++|.+.|.++..+|+. .++++++.++.++++++.+.+.|+.++.+.+ .+.|+
T Consensus 252 ~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~-----------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~g~ 319 (386)
T PRK07550 252 PARIAEIEKFMDTVAICAPRIGQIAVAWGLPN-----------LADWRAGNRAEIARRRDAFRAVFARLPGWEL-LASGA 319 (386)
T ss_pred HHHHHHHHHHHhhcccCCCcHHHHHHHHHhcc-----------HHHHHHHHHHHHHHHHHHHHHHHHhCCCcee-CCCce
Confidence 89999999888777788899999999998872 2678889999999999999999998644443 34566
Q ss_pred ccccccccCCCCCceEEeecCc---cHHHHHH-HHHhCCEEeecCCCCCC-CCCeEEEEecC-ChhHHHHHHHHHHhh
Q 012785 383 FCTFLGRAFEPQPAFAWLKCEQ---EIEDCES-FLKGNKILTRSGKHFGF-SPKYVRISMLD-RDENYNLFVQRLSKI 454 (456)
Q Consensus 383 ~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~-~l~~~gI~v~pg~~fg~-~~~~iRis~~~-~~e~i~~~l~~L~~~ 454 (456)
+ |+|++++. +..++.. +++++||.++||..|+. .++++||+++. +++++++++++|+++
T Consensus 320 ~-------------~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 320 Y-------------FAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred E-------------EEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 6 89998853 3455555 45789999999999974 46899999986 788999999999876
No 59
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=1.4e-41 Score=341.85 Aligned_cols=323 Identities=16% Similarity=0.218 Sum_probs=258.5
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHH-HhcCccCCCceEEEccCH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHK-VVGNAITENHHIVVGTGS 172 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~I~~t~G~ 172 (456)
..++||+.|.|+...++.+... ....+... ...|++..| .++||+++++++. .+|....++++|++|+|+
T Consensus 24 ~~~i~l~~g~p~~~~~~~~~~~-~~~~~~~~---~~~Y~~~~g-----~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~ 94 (387)
T PRK07777 24 TGAVNLGQGFPDEDGPPEMLEA-AQEAIAGG---VNQYPPGPG-----IPELRAAIAAQRRRRYGLEYDPDTEVLVTVGA 94 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHH-HHHHHhcC---CCCCCCCCC-----CHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCc
Confidence 4789999999987765443322 11222222 346988888 5999999999885 457666544479999999
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc---------ccccc---CCCeEEEEcCCCC
Q 012785 173 TQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA---------KRFNK---DGPYIELVTSPNN 240 (456)
Q Consensus 173 ~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~---------~~l~~---~~~~~i~v~~P~N 240 (456)
++++.+++.+++.+|| +|+++.|+|+.+...++..|.+++.++.|. +.++. .+++++++++|||
T Consensus 95 ~~al~~~~~~~~~~gd----~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~N 170 (387)
T PRK07777 95 TEAIAAAVLGLVEPGD----EVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHN 170 (387)
T ss_pred HHHHHHHHHHhcCCCC----EEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCC
Confidence 9999999999999999 999999999999999999999988766543 33332 3678999999999
Q ss_pred CCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCC---CCCCCcEEEecCccccCCCCceEEEEEEeCHH
Q 012785 241 PDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKDME 304 (456)
Q Consensus 241 PtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~ 304 (456)
|||.+++. +|+++++++|+||+|.+..+ .++. ...+++|+++||||.||+||+|+||++++ ++
T Consensus 171 PtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~-~~ 249 (387)
T PRK07777 171 PTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGP-AP 249 (387)
T ss_pred CCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecC-HH
Confidence 99999872 78899999999999975322 2222 23468999999999999999999999997 89
Q ss_pred HHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccc
Q 012785 305 VAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFC 384 (456)
Q Consensus 305 ~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~ 384 (456)
+++.+.+......++.+.+.|.++..++. .+ +++++++++.++++++.+.+.|++.+ +.+..++|++
T Consensus 250 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~--------~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~g~~- 316 (387)
T PRK07777 250 LIAAVRAAKQYLTYVGGAPFQPAVAHALD---HE--------DAWVAALRDSLQAKRDRLAAGLAEAG-FEVHDSAGTY- 316 (387)
T ss_pred HHHHHHHHHhhcccCCCCHHHHHHHHHHh---CC--------cHHHHHHHHHHHHHHHHHHHHHHhCC-CCccCCCcce-
Confidence 99999888776677888999999888886 33 57888999999999999999999874 6667777887
Q ss_pred ccccccCCCCCceEEeecCc----cHHHHHHHH-HhCCEEeecCCCCCC----CCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 385 TFLGRAFEPQPAFAWLKCEQ----EIEDCESFL-KGNKILTRSGKHFGF----SPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 385 ~~~~~~~~~~~~f~~~~~~~----~~~~~~~~l-~~~gI~v~pg~~fg~----~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
|+|++++. +...+.+.| +++||.|.||..|+. .+++|||+++.+++++++++++|+++.
T Consensus 317 ------------~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 317 ------------FLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRALR 384 (387)
T ss_pred ------------EEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 89988641 345555555 578999999999963 256999999889999999999999864
No 60
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=2e-41 Score=342.29 Aligned_cols=327 Identities=18% Similarity=0.244 Sum_probs=249.0
Q ss_pred cCCCCeEEecCCCCC---CCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcC-ccCCCceE
Q 012785 91 DGGERIINVDHGDPT---MYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGN-AITENHHI 166 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~---~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~-~~~~~~~I 166 (456)
..++++|+|+.|+|+ +++++.+.+... ..+ . ....|+++.| .++||+++|+++...+. .. ++++|
T Consensus 30 ~~~~~~i~l~~g~p~~~~~~~~~~i~~~~~-~~~-~---~~~~Y~~~~G-----~~~lr~~ia~~~~~~~~~~~-~~~~i 98 (404)
T PRK09265 30 EEGHKILKLNIGNPAPFGFEAPDEILRDVI-RNL-P---TAQGYSDSKG-----LFSARKAIMQYYQQKGIPDV-DVDDI 98 (404)
T ss_pred HcCCCeEEecCCCCCcCCCCCCHHHHHHHH-HHh-h---cCCCCCCCCC-----cHHHHHHHHHHHhccCCCCC-CcccE
Confidence 456789999999984 444443333211 111 1 1346999999 59999999999976555 34 46799
Q ss_pred EEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC--------cccccc---CCCeEEEE
Q 012785 167 VVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD--------AKRFNK---DGPYIELV 235 (456)
Q Consensus 167 ~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d--------~~~l~~---~~~~~i~v 235 (456)
++|+|+++++.+++.+++++|| +|++++|+|+.+...++..|.+++.++.| .+.++. .+++++++
T Consensus 99 ~~t~G~~~~l~~~~~~~~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l 174 (404)
T PRK09265 99 YIGNGVSELIVMAMQALLNNGD----EVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVI 174 (404)
T ss_pred EEeCChHHHHHHHHHHhCCCCC----EEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEE
Confidence 9999999999999999999999 99999999999999999999988876544 233332 36789999
Q ss_pred cCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCCC--CCCCcEEEecCccccCCCCceEEEEEE
Q 012785 236 TSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSITY--PADHDLMLFTVSKSTGHAGTRIGWALV 300 (456)
Q Consensus 236 ~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~~--~~~~~i~i~S~SK~~g~~G~RiG~l~~ 300 (456)
+|||||||.+++. +|+++|++||+||+|.+..+ .++.. ...++|+++||||.||+||+|+||+++
T Consensus 175 ~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~ 254 (404)
T PRK09265 175 INPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVL 254 (404)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEE
Confidence 9999999999882 67889999999999986332 22221 223689999999999999999999997
Q ss_pred e-CHH----HHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 012785 301 K-DME----VAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFS 375 (456)
Q Consensus 301 ~-~~~----~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 375 (456)
+ +++ +++.+... .....++|.++|.++.++|. +.. ..+++++ .++.++++++.+.+.|++++++.
T Consensus 255 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~---~~~-----~~~~~~~-~~~~~~~~r~~~~~~L~~~~~~~ 324 (404)
T PRK09265 255 SGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALG---GYQ-----SINELIL-PGGRLYEQRDRAWELLNAIPGVS 324 (404)
T ss_pred eCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhc---Cch-----hHHHHHH-HHHHHHHHHHHHHHHHhcCCCCc
Confidence 4 244 33434332 23457889999999999886 210 0122222 23567788999999998876677
Q ss_pred ccCCCCcccccccccCCCCCceEEeecCc-------cHHHHHHHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHH
Q 012785 376 VPELPSQFCTFLGRAFEPQPAFAWLKCEQ-------EIEDCESFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLF 447 (456)
Q Consensus 376 ~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-------~~~~~~~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~ 447 (456)
+..|.|++ |+|++++. +.+.+.++++++||.+.||+.|+. .++++|++++.++|+++++
T Consensus 325 ~~~p~~g~-------------~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~ 391 (404)
T PRK09265 325 CVKPKGAL-------------YAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEA 391 (404)
T ss_pred ccCCCcce-------------EEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHH
Confidence 78888888 99998863 345688899999999999999963 5789999997789999999
Q ss_pred HHHHHhhh
Q 012785 448 VQRLSKIL 455 (456)
Q Consensus 448 l~~L~~~l 455 (456)
+++|++++
T Consensus 392 l~rl~~~l 399 (404)
T PRK09265 392 IGRIGRFL 399 (404)
T ss_pred HHHHHHHH
Confidence 99999876
No 61
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.7e-42 Score=340.89 Aligned_cols=308 Identities=17% Similarity=0.211 Sum_probs=244.7
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccC
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTG 171 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G 171 (456)
.+.++|+|+.|+|++.+++.+.+.... .+ .. ...|++ .| .++||++||++++. ++++|++|+|
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~-~~-~~---~~~Y~~-~~-----~~~lr~~ia~~~~~------~~~~I~it~G 90 (357)
T PRK14809 28 DPDDLVKLSSNENPHGPSPAAVEAIRE-AA-ER---VHSYPK-AS-----HADLTAALADRWDV------SPEQVWLANG 90 (357)
T ss_pred CccceeEecCCCCCCCCCHHHHHHHHH-HH-hh---hhcCCC-CC-----HHHHHHHHHHHhCC------CcceEEECCC
Confidence 456799999999998877655543211 11 12 346876 56 59999999999853 4689999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc-ccc-------cc--CCCeEEEEcCCCCC
Q 012785 172 STQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA-KRF-------NK--DGPYIELVTSPNNP 241 (456)
Q Consensus 172 ~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~-~~l-------~~--~~~~~i~v~~P~NP 241 (456)
+++++++++++++++|| +|++++|+|+.+...++..|.+++.++++. +++ .. .++++++++|||||
T Consensus 91 ~~~al~~~~~~~~~~gd----~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~k~i~l~~p~NP 166 (357)
T PRK14809 91 GDGALDYLARAMLDPGD----TVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYDGERIVYLTSPHNP 166 (357)
T ss_pred HHHHHHHHHHHhcCCCC----EEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhcCCcEEEEeCCCCC
Confidence 99999999999999999 999999999999998898999888766543 222 21 25789999999999
Q ss_pred CcccchH-----Hhhh--cCcEEEeeecCCCCCCCC--C--CCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHH
Q 012785 242 DGSVRQS-----VVNR--SGGILVHDLAYYWPQYTS--I--TYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMT 310 (456)
Q Consensus 242 tG~~~~~-----l~~~--~~~~iI~De~y~~~~~~~--~--~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~ 310 (456)
||.+++. +++. .+++||+||+|.+..+.+ + ....+++++++||||.||+||+|+||++++ +++++++.
T Consensus 167 TG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~-~~~~~~~~ 245 (357)
T PRK14809 167 TGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVP-EEWADAYA 245 (357)
T ss_pred CCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecC-HHHHHHHH
Confidence 9999983 4443 378999999998643321 1 123578999999999999999999999997 88999988
Q ss_pred HHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccccccccc
Q 012785 311 KYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRA 390 (456)
Q Consensus 311 ~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~ 390 (456)
+.. ..++++.++|.++..+|. + ++++++.++.++++++.+.+.|+... .+.+++
T Consensus 246 ~~~--~~~~~~~~~~~~a~~~l~---~---------~~~~~~~~~~~~~~r~~l~~~L~~~~-----~~~~g~------- 299 (357)
T PRK14809 246 RVN--TPFAASELACRAGLAALD---D---------DEHVERTVETARWAREYIREELDAPT-----WESAGN------- 299 (357)
T ss_pred HhC--CCCCCCHHHHHHHHHHhC---C---------HHHHHHHHHHHHHHHHHHHHHhcCcc-----CCCCCC-------
Confidence 765 367889999999998886 2 57888999999999999999886521 133444
Q ss_pred CCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 391 FEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 391 ~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
|+|++++ +.+.+.+.++++||.|+||+.|+. +++|||+++ +++++++++++|+++++
T Consensus 300 ------f~~~~~~-~~~~~~~~l~~~gv~v~~g~~f~~-~~~iRls~~-~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 300 ------FVLAEVG-DASAVAEAAQERGVIVRDCTSFGL-PECIRITCG-TREETERAVEVLNEVLA 356 (357)
T ss_pred ------EEEEECC-CHHHHHHHHHHCCEEEEECccCCC-CCeEEEecC-CHHHHHHHHHHHHHHhc
Confidence 8999986 445666778899999999999975 689999985 57899999999999874
No 62
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=5.5e-42 Score=340.20 Aligned_cols=310 Identities=18% Similarity=0.222 Sum_probs=245.5
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGST 173 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~ 173 (456)
.+++||+.|+|...+|+.+.+.... .+ .....|+++ | .++||+++|+|++. ++++|++|+|++
T Consensus 19 ~~~~~l~~~~~~~~~p~~~~~a~~~-~~----~~~~~Y~~~-~-----~~~lr~~ia~~~~~------~~~~i~it~Ga~ 81 (354)
T PRK06358 19 NMILDFSANINPLGVPESLKQAITE-NL----DKLVEYPDP-D-----YLELRKRIASFEQL------DLENVILGNGAT 81 (354)
T ss_pred cceEEecCCCCCCCCCHHHHHHHHH-HH----HhhhcCCCc-c-----HHHHHHHHHHHhCC------ChhhEEECCCHH
Confidence 3579999998877656544433221 11 123468775 4 48999999999853 568999999999
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc-c--c-----c--cCCCeEEEEcCCCCCCc
Q 012785 174 QLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK-R--F-----N--KDGPYIELVTSPNNPDG 243 (456)
Q Consensus 174 ~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~--l-----~--~~~~~~i~v~~P~NPtG 243 (456)
+++.++++++ .+ + +|++++|+|+.|...++..|.+++.++.|.+ + + + ..++++++++|||||||
T Consensus 82 ~~l~~~~~~~-~~-~----~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~~P~NPtG 155 (354)
T PRK06358 82 ELIFNIVKVT-KP-K----KVLILAPTFAEYERALKAFDAEIEYAELTEETNFAANEIVLEEIKEEIDLVFLCNPNNPTG 155 (354)
T ss_pred HHHHHHHHHh-CC-C----cEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCccHHHHHhhccCCCEEEEeCCCCCCC
Confidence 9999999986 34 5 7999999999999999999999988876532 1 1 1 12578888999999999
Q ss_pred ccchH--------HhhhcCcEEEeeecCCCCCCC----C-C--CCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHH
Q 012785 244 SVRQS--------VVNRSGGILVHDLAYYWPQYT----S-I--TYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKK 308 (456)
Q Consensus 244 ~~~~~--------l~~~~~~~iI~De~y~~~~~~----~-~--~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~ 308 (456)
.+++. +|+++++++|+||+|.+..+. + + ....+++|+++||||.||+||+|+||++++++.+++.
T Consensus 156 ~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~ 235 (354)
T PRK06358 156 QLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEK 235 (354)
T ss_pred CccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHH
Confidence 99983 678899999999999853222 1 1 1234789999999999999999999999865788888
Q ss_pred HHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccccccc
Q 012785 309 MTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLG 388 (456)
Q Consensus 309 l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~ 388 (456)
+.+... .++++.++|.++..+|+ + .+++++.++.++++++.+.+.|++.+++.+..+.
T Consensus 236 ~~~~~~--~~~~~~~~q~~~~~~l~---~---------~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-------- 293 (354)
T PRK06358 236 LLQMRE--PWSINTFADLAGQTLLD---D---------KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPS-------- 293 (354)
T ss_pred HHHhCC--CCcchHHHHHHHHHHhc---c---------HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCc--------
Confidence 888764 67889999999999986 2 4678889999999999999999887545544443
Q ss_pred ccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 389 RAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 389 ~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
++|+|++++.. ..+.+.|.++||.++||+.|+. +++++||++ .++++++++++.|+++++
T Consensus 294 ------g~f~~~~~~~~-~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~-~~~~~~~~l~~~l~~~~~ 354 (354)
T PRK06358 294 ------VNFIFFKLEKP-IDLRKELLKKGILIRSCSNYRGLDENYYRVAV-KSREDNKKLLKALEVILS 354 (354)
T ss_pred ------ceEEEEEcCch-HHHHHHHHHCCeEEEECCCCCCCCCCEEEEEe-CCHHHHHHHHHHHHHHhC
Confidence 34799999754 5677777789999999999954 568999998 677889999999998864
No 63
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.4e-42 Score=345.46 Aligned_cols=305 Identities=18% Similarity=0.232 Sum_probs=243.9
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccC
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTG 171 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G 171 (456)
.++++|+|+.|+|++++++.+.+.... .+. ...+|++ .| .++||++||+|++. ++++|++|+|
T Consensus 27 ~~~~~i~l~~nen~~~~~~~v~~a~~~-~~~----~~~~Yp~-~g-----~~~Lr~aia~~~~~------~~~~I~vt~G 89 (366)
T PRK01533 27 GDHSFVKLASNENPFGCSPRVLDELQK-SWL----DHALYPD-GG-----ATTLRQTIANKLHV------KMEQVLCGSG 89 (366)
T ss_pred CCCceEEeCCCCCCCCCCHHHHHHHHH-HHH----hcCcCCC-CC-----HHHHHHHHHHHhCC------CcceEEECCC
Confidence 345789999999999888766653221 111 1235765 56 58999999999864 5689999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC-----cccccc---CCCeEEEEcCCCCCCc
Q 012785 172 STQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD-----AKRFNK---DGPYIELVTSPNNPDG 243 (456)
Q Consensus 172 ~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d-----~~~l~~---~~~~~i~v~~P~NPtG 243 (456)
+++++.+++++++++|| +|++++|+|+.|...++..|.+++.++.| .+.++. .++++++++|||||||
T Consensus 90 s~e~i~~~~~~l~~~gd----~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG 165 (366)
T PRK01533 90 LDEVIQIISRAVLKAGD----NIVTAGATFPQYRHHAIIEGCEVKEVALNNGVYDLDEISSVVDNDTKIVWICNPNNPTG 165 (366)
T ss_pred HHHHHHHHHHHhcCCCC----EEEEcCCcHHHHHHHHHHcCCEEEEeecCCCCcCHHHHHHHhCcCCcEEEEeCCCCCCC
Confidence 99999999999999999 99999999999999999999999887764 334432 3678999999999999
Q ss_pred ccchH-----H---hhhcCcEEEeeecCCCCCC-----CCC--CCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHH
Q 012785 244 SVRQS-----V---VNRSGGILVHDLAYYWPQY-----TSI--TYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKK 308 (456)
Q Consensus 244 ~~~~~-----l---~~~~~~~iI~De~y~~~~~-----~~~--~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~ 308 (456)
.+++. + |++++ ++|+||+|.+..+ ..+ ....+++|+++||||.||+||+|+||++++ ++++++
T Consensus 166 ~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~-~~~~~~ 243 (366)
T PRK01533 166 TYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH-EELIEK 243 (366)
T ss_pred CCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC-HHHHHH
Confidence 99983 3 44454 6778999975211 111 134578999999999999999999999996 999999
Q ss_pred HHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccccccc
Q 012785 309 MTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLG 388 (456)
Q Consensus 309 l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~ 388 (456)
+.+.+ ..+++|.++|.++.++|+ + .++++..++.++++++.+.+.++.++ +.+
T Consensus 244 l~~~~--~~~~~~~~~q~aa~~~l~---~---------~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~------------ 296 (366)
T PRK01533 244 LNVVR--LPFNVSSLAQKAATIAFG---D---------DEFIEEIVRVNTEGLRQYESFCKENE-IPF------------ 296 (366)
T ss_pred HHHhc--CCCCcCHHHHHHHHHHhC---C---------HHHHHHHHHHHHHHHHHHHHHHHhCC-Ccc------------
Confidence 98876 368999999999999997 2 46788888889999999999888764 332
Q ss_pred ccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 389 RAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 389 ~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
++++++|+|++++ +...+.+.|.++||.|++ | ++++||++ .+.++++.+++.|+++++
T Consensus 297 --~~~~~nf~~~~~~-~~~~~~~~l~~~GI~Vr~---~---~~~iRis~-~~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 297 --YQSQTNFIFLPVE-NGGEIYEACAHAGFIIRP---F---PNGVRITV-GTREQNEGVISVLQQHFE 354 (366)
T ss_pred --CCCcCcEEEEeCC-CHHHHHHHHHHCCcEEcc---C---CCceEEeC-CCHHHHHHHHHHHHHHHH
Confidence 3456669999986 456678888899999998 4 57899998 677899999999998763
No 64
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=7.4e-42 Score=340.39 Aligned_cols=308 Identities=15% Similarity=0.181 Sum_probs=236.1
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGST 173 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~ 173 (456)
.++|+|+.+++++.+++.+.+... ..+ . ....|+++.+ ++||++||+|++. ++++|++|+|++
T Consensus 22 ~~~i~l~~~~n~~~~~~~~~~a~~-~~~-~---~~~~Y~~~~~------~~Lr~aia~~~~v------~~~~I~it~G~~ 84 (360)
T PRK07392 22 DAILDFSASINPLGPPESVIAAIQ-SAL-S---ALRHYPDPDY------RELRLALAQHHQL------PPEWILPGNGAA 84 (360)
T ss_pred ccEEEeCCcCCCCCCCHHHHHHHH-HHH-H---HhhcCCCcCH------HHHHHHHHHHhCc------ChhhEEECCCHH
Confidence 468999999888877765554321 111 1 1346887653 8999999999943 467999999999
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCccc--------cc---c--CCCeEEEEcCCCC
Q 012785 174 QLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKR--------FN---K--DGPYIELVTSPNN 240 (456)
Q Consensus 174 ~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~--------l~---~--~~~~~i~v~~P~N 240 (456)
++|.++++++. +|| +|++++|+|+.|...++..|++++.+++|.++ ++ . .++++++++||||
T Consensus 85 ~~i~~~~~~l~-~g~----~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nP~N 159 (360)
T PRK07392 85 ELLTWAGRELA-QLR----AVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQLTPNDGLLLNNPHN 159 (360)
T ss_pred HHHHHHHHHhC-CCC----eEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhccCCCEEEEeCCCC
Confidence 99999999875 677 99999999999999999999999988876432 11 1 2568999999999
Q ss_pred CCcccchH-----HhhhcCcEEEeeecCCCCCCC----CC---CCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHH
Q 012785 241 PDGSVRQS-----VVNRSGGILVHDLAYYWPQYT----SI---TYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKK 308 (456)
Q Consensus 241 PtG~~~~~-----l~~~~~~~iI~De~y~~~~~~----~~---~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~ 308 (456)
|||.++++ +++++++ +|+||+|.+..+. +. ....+++|+++||||.||+||+|+||++++ ++++++
T Consensus 160 PTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~-~~~~~~ 237 (360)
T PRK07392 160 PTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAH-PDRLQR 237 (360)
T ss_pred CCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCC-HHHHHH
Confidence 99999994 7788885 6669999864221 11 133468999999999999999999999997 888888
Q ss_pred HHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccccccc
Q 012785 309 MTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLG 388 (456)
Q Consensus 309 l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~ 388 (456)
+.+.. ..+++|.++|.++.++|+ + .++.+..++.++++|+.+.+.|+.++++.+. +.+++
T Consensus 238 ~~~~~--~~~~~s~~~q~~~~~~l~---~---------~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~----- 297 (360)
T PRK07392 238 WQQWR--DPWPVNGLAAAAAIAALA---D---------RDFQQQTWAWLPPAREALFQGLASLPGLTPL-PSAAN----- 297 (360)
T ss_pred HHhhC--CCCCCCHHHHHHHHHHhc---c---------HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCC-----
Confidence 87665 357899999999999987 2 3566777788999999999999887555443 24444
Q ss_pred ccCCCCCceEEeecCccHHHHHH-HHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhh
Q 012785 389 RAFEPQPAFAWLKCEQEIEDCES-FLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKI 454 (456)
Q Consensus 389 ~~~~~~~~f~~~~~~~~~~~~~~-~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~ 454 (456)
|+|++++.+..++.+ +++++||.++||..|+. +++++||+++. +++.+++.+.|+++
T Consensus 298 --------fl~~~~~~~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~~~l~~al~~~ 356 (360)
T PRK07392 298 --------FLLVQSQGSALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT-EAENQRLLEALAAI 356 (360)
T ss_pred --------EEEEEcCCCHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC-HHHHHHHHHHHHHH
Confidence 999998755555554 46789999999999974 56899999965 33334444444444
No 65
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-42 Score=336.18 Aligned_cols=312 Identities=21% Similarity=0.297 Sum_probs=256.4
Q ss_pred CeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHH
Q 012785 95 RIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQ 174 (456)
Q Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~ 174 (456)
++++|+.+++++++++++.... .........||++. ..+|+++++++++. .++++|++++|+++
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~-----~~~~~~~~rYPd~~------~~~l~~a~a~~~~~-----~~~~~V~~gnGsde 86 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAI-----RAALDKLNRYPDPD------YRELRAALAEYYGV-----VDPENVLVGNGSDE 86 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHH-----HHHHHhhccCCCCc------HHHHHHHHHHHhCC-----CCcceEEEcCChHH
Confidence 6899999998888776665432 11111245799986 49999999999973 15689999999999
Q ss_pred HHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC-----cccccc---CCCeEEEEcCCCCCCcccc
Q 012785 175 LFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD-----AKRFNK---DGPYIELVTSPNNPDGSVR 246 (456)
Q Consensus 175 al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d-----~~~l~~---~~~~~i~v~~P~NPtG~~~ 246 (456)
+|..++++++.+|| +|+++.|+|..|...++..|++++.++.+ .+.+.. .++++++++|||||||..+
T Consensus 87 ~i~~l~~~~~~~gd----~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~ 162 (356)
T COG0079 87 LIELLVRAFVEPGD----TVLIPEPTFSMYEIAAQLAGAEVVKVPLKEFRLDLDAILAAIRDKTKLVFLCNPNNPTGTLL 162 (356)
T ss_pred HHHHHHHHhhcCCC----EEEEcCCChHHHHHHHHhcCCeEEEecccccccCHHHHHHhhhcCCCEEEEeCCCCCCCCCC
Confidence 99999999999999 99999999999999999999999877654 344432 2689999999999999999
Q ss_pred hH-----Hhhh--cCcEEEeeecCCCCCCCC---CCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhc
Q 012785 247 QS-----VVNR--SGGILVHDLAYYWPQYTS---ITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELN 316 (456)
Q Consensus 247 ~~-----l~~~--~~~~iI~De~y~~~~~~~---~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~ 316 (456)
+. +++. .+.++|+||+|.+....+ +...++|+++++||||.||++|+|+||++++ +++++.+.+.+.
T Consensus 163 ~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~-~~~i~~l~~vr~-- 239 (356)
T COG0079 163 PREELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIAN-PELIAALNKVRP-- 239 (356)
T ss_pred CHHHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhhcchhceeeccCC-HHHHHHHHHhcC--
Confidence 84 4432 288999999999743322 1135678999999999999999999999985 999999999986
Q ss_pred cCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCc
Q 012785 317 TIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPA 396 (456)
Q Consensus 317 ~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 396 (456)
.+++|.++|.++.++|+. ++++++.++.+++.|+++.+.|+.++ +. .++++++|
T Consensus 240 p~~v~~~a~~aa~aal~~------------~~~~~~~~~~~~~~r~rl~~~l~~~~-~~-------------~v~pS~aN 293 (356)
T COG0079 240 PFNVSSPALAAAIAALRD------------ADYLEESVERIREERERLYAALKALG-LF-------------GVFPSQAN 293 (356)
T ss_pred CCCCCHHHHHHHHHHccc------------HHHHHHHHHHHHHHHHHHHHHHHhCC-CC-------------eecCCCCc
Confidence 899999999999999982 58999999999999999999999876 22 24567788
Q ss_pred eEEeecCc-cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 397 FAWLKCEQ-EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 397 f~~~~~~~-~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
|++++++. ....+.+.|.++||.||.....+..++++||++ .++|+.+.++++|+++++
T Consensus 294 Fvlv~~~~~~~~~l~~~L~~~giivR~~~~~~~~~~~lRitv-gt~een~~ll~AL~~~~~ 353 (356)
T COG0079 294 FVLVRVPDAEAAALAEALLKKGILVRDCSSVGLLPGYLRITV-GTPEENDRLLAALREVLK 353 (356)
T ss_pred EEEEECCCccHHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEe-CCHHHHHHHHHHHHHHHh
Confidence 99999963 244788999999999999865444678999999 677777999999998763
No 66
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=4.8e-41 Score=339.39 Aligned_cols=326 Identities=18% Similarity=0.262 Sum_probs=253.5
Q ss_pred CCCCeEEecCCCCC----CCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceE
Q 012785 92 GGERIINVDHGDPT----MYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHI 166 (456)
Q Consensus 92 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I 166 (456)
++.++|+|+.|+|. +++++.+.+... ..+.... ...|++..| .++||++++++++. .+.... +++|
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~-~~l~~~~--~~~Y~~~~g-----~~~lr~~ia~~l~~~~~~~~~-~~~i 99 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVK-DALRSGK--FNGYAPSVG-----ALAAREAVAEYLSSDLPGKLT-ADDV 99 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHH-HHHhcCC--CCCCCCCCC-----CHHHHHHHHHHHHhhcCCCCC-HHHE
Confidence 46789999999985 455554443221 1222222 236877888 59999999999975 355554 5799
Q ss_pred EEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc--------Ccccccc---CCCeEEEE
Q 012785 167 VVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG--------DAKRFNK---DGPYIELV 235 (456)
Q Consensus 167 ~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~--------d~~~l~~---~~~~~i~v 235 (456)
++|+|+++++.+++.++..+|| +|++++|+|+.+...++..|.+++.++. |.+.++. .+++++++
T Consensus 100 i~t~G~t~al~~~~~~l~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i 175 (403)
T TIGR01265 100 VLTSGCSQAIEICIEALANPGA----NILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAIVV 175 (403)
T ss_pred EEecChHHHHHHHHHHhCCCCC----EEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEEEE
Confidence 9999999999999999999999 9999999999999999999998876654 3333332 35788999
Q ss_pred cCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCCC-----CCCC--CCCCcEEEecCccccCCCCceEEEEEE
Q 012785 236 TSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQYT-----SITY--PADHDLMLFTVSKSTGHAGTRIGWALV 300 (456)
Q Consensus 236 ~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~~-----~~~~--~~~~~i~i~S~SK~~g~~G~RiG~l~~ 300 (456)
++||||||.+++. +|+++|+++|+||+|.+..+. ++.. ...++|+++||||.|++||+|+||+++
T Consensus 176 ~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~ 255 (403)
T TIGR01265 176 INPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIII 255 (403)
T ss_pred ecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEE
Confidence 9999999999872 688999999999999864322 2221 234799999999999999999999998
Q ss_pred eCH-H-----HHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 012785 301 KDM-E-----VAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLF 374 (456)
Q Consensus 301 ~~~-~-----~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~ 374 (456)
+++ . +.+.+..... ...+++.+.|.++..+|.. . .+.++++.++.++++++.+.+.|+.++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~---~-------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 324 (403)
T TIGR01265 256 HDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILEN---T-------PQEFFDGKISVLKSNAELCYEELKDIPGL 324 (403)
T ss_pred eCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHh---C-------hHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 532 2 3444444432 3567899999999999972 2 26789999999999999999999987556
Q ss_pred cccCCCCcccccccccCCCCCceEEeecCc-------cHHHH-HHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHH
Q 012785 375 SVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-------EIEDC-ESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNL 446 (456)
Q Consensus 375 ~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-------~~~~~-~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~ 446 (456)
.+..|.|++ |+|++++. +..++ ..+++++||.+.||+.|+. ++++||+++.+++++++
T Consensus 325 ~~~~p~~g~-------------f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~-~~~iRis~~~~~~~l~~ 390 (403)
T TIGR01265 325 VCPKPEGAM-------------YLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGL-PNWVRITITVPESMLEE 390 (403)
T ss_pred eecCCCcee-------------EEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCC-CCeEEEEecCCHHHHHH
Confidence 666677777 99999852 23444 4456789999999999974 78999999888889999
Q ss_pred HHHHHHhhh
Q 012785 447 FVQRLSKIL 455 (456)
Q Consensus 447 ~l~~L~~~l 455 (456)
++++|++++
T Consensus 391 ~l~~l~~~~ 399 (403)
T TIGR01265 391 ACSRIKEFC 399 (403)
T ss_pred HHHHHHHHH
Confidence 999999876
No 67
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.7e-41 Score=333.81 Aligned_cols=295 Identities=17% Similarity=0.226 Sum_probs=230.9
Q ss_pred CeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHH
Q 012785 95 RIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQ 174 (456)
Q Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~ 174 (456)
.+|+|+.+++++... .....|+++. ..+||+++|++++. ++++|++|+|+++
T Consensus 17 ~~i~l~~Nenp~~~~----------------~~~~~Yp~~~------~~~lr~~ia~~~~~------~~~~I~it~Gs~~ 68 (332)
T PRK06425 17 RIIDFSANINDFMDI----------------GDISIYPEIS------YTDIEDQIKIYTQG------LKIKVLIGPGLTH 68 (332)
T ss_pred CEEEeccccCCCcCh----------------hhcccCcCcC------HHHHHHHHHHHhCC------CcceEEECCCHHH
Confidence 679999998776311 1134688876 49999999999986 5789999999999
Q ss_pred HHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc-----cccccCCCeEEEEcCCCCCCcccchH-
Q 012785 175 LFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA-----KRFNKDGPYIELVTSPNNPDGSVRQS- 248 (456)
Q Consensus 175 al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~-----~~l~~~~~~~i~v~~P~NPtG~~~~~- 248 (456)
+|.+++. ++.++ .|++++|+|+.|...++..|++++.++.|. +.++..++++++++|||||||.+++.
T Consensus 69 ~l~~~~~-~~~~~-----~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~~~~~~~~l~~~~~k~v~l~nP~NPTG~~~s~~ 142 (332)
T PRK06425 69 FIYRLLS-YINVG-----NIIIVEPNFNEYKGYAFTHGIRISALPFNLINNNPEILNNYNFDLIFIVSPDNPLGNLISRD 142 (332)
T ss_pred HHHHHHH-HhCCC-----cEEEeCCChHHHHHHHHHcCCeEEEEeCCcccCcHHHHhhcCCCEEEEeCCCCCcCCccCHH
Confidence 9999997 45665 577889999999999999999999887753 22333477899999999999999993
Q ss_pred -------HhhhcCcEEEeeecCCCCCCC---CC---CCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhh
Q 012785 249 -------VVNRSGGILVHDLAYYWPQYT---SI---TYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIEL 315 (456)
Q Consensus 249 -------l~~~~~~~iI~De~y~~~~~~---~~---~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~ 315 (456)
+|++++++||+||+|.+..+. +. ....+++|+++||||++|+||+|+||++++ +++++.+.+...
T Consensus 143 ~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~-~~li~~l~~~~~- 220 (332)
T PRK06425 143 SLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATD-DYNMKISRKITE- 220 (332)
T ss_pred HHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecC-HHHHHHHHHcCC-
Confidence 577899999999999864332 11 123468999999999999999999999997 899998887643
Q ss_pred ccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCC
Q 012785 316 NTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQP 395 (456)
Q Consensus 316 ~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~ 395 (456)
.+.++.+.+ +++.. + ..++++++.++.++++|+.+.+.|++.+ +.+..+ +.+
T Consensus 221 -~~~~~~~~~----~~l~~---~------~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~-------------~~g 272 (332)
T PRK06425 221 -PWSVCDPAI----DFIRS---I------DLDYVAKHSLDIMENERSYLINNLEAMG-FRAAGD-------------PSA 272 (332)
T ss_pred -CCccCHHHH----HHHHH---h------hhHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCC-------------CCc
Confidence 344444433 33331 1 1256778899999999999999999874 443322 233
Q ss_pred ceEEeecCccHHHHHHHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 396 AFAWLKCEQEIEDCESFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 396 ~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
+|+|++++ +.+.+.+.|.++||.++||+.|+. +++++||++ .++++++.+++.|++++
T Consensus 273 ~f~~~~~~-~~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~-~~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 273 NFITFMIP-DAHDFYSYLLKNGILVRLLDDYECLGEQYIRIAI-RRRSFNIKLVNALRNFL 331 (332)
T ss_pred eEEEEEcC-CHHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEe-CCHHHHHHHHHHHHHHh
Confidence 48999987 566677778889999999999953 468999999 56789999999999876
No 68
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.4e-41 Score=336.58 Aligned_cols=325 Identities=21% Similarity=0.280 Sum_probs=263.4
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEcc
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGT 170 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~ 170 (456)
.+..+++|+.|+|++++++.+.+... ..+... ...|++..| .++||++|+++++. +|.... +++|++|+
T Consensus 29 ~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~---~~~Y~~~~g-----~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~ 98 (393)
T PRK05764 29 QGRDVISLGAGEPDFDTPEHIKEAAI-EALDDG---KTKYTPAAG-----IPELREAIAAKLKRDNGLDYD-PSQVIVTT 98 (393)
T ss_pred ccCCEEEeCCCCCCCCCCHHHHHHHH-HHHhcC---CCCcCCCCC-----hHHHHHHHHHHHHHHhCCCCC-HHHEEEeC
Confidence 35678999999999887665544321 122222 235888888 59999999999954 455454 57999999
Q ss_pred CHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc--------ccccc---CCCeEEEEcCCC
Q 012785 171 GSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA--------KRFNK---DGPYIELVTSPN 239 (456)
Q Consensus 171 G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~--------~~l~~---~~~~~i~v~~P~ 239 (456)
|+++++..++.+++++|| +|++++|+|..+...++..|.+++.++.|. +.++. .+++++++++||
T Consensus 99 g~~~a~~~~~~~~~~~gd----~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~ 174 (393)
T PRK05764 99 GAKQALYNAFMALLDPGD----EVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPS 174 (393)
T ss_pred CcHHHHHHHHHHhcCCCC----EEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCC
Confidence 999999999999999999 999999999999999999999998877653 23322 357899999999
Q ss_pred CCCcccch--------HHhhhcCcEEEeeecCCCCCC-----CCC----CCCCCCcEEEecCccccCCCCceEEEEEEeC
Q 012785 240 NPDGSVRQ--------SVVNRSGGILVHDLAYYWPQY-----TSI----TYPADHDLMLFTVSKSTGHAGTRIGWALVKD 302 (456)
Q Consensus 240 NPtG~~~~--------~l~~~~~~~iI~De~y~~~~~-----~~~----~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~ 302 (456)
||||.+++ ++|+++++++|+||+|.+..+ .++ ....+++++++||||.+|++|+|+||++++
T Consensus 175 NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~- 253 (393)
T PRK05764 175 NPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGP- 253 (393)
T ss_pred CCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecC-
Confidence 99999987 268899999999999985322 122 133468999999999999999999999986
Q ss_pred HHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCc
Q 012785 303 MEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQ 382 (456)
Q Consensus 303 ~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~ 382 (456)
+++++++.........+++++.|.++.++|+ +. ++++++.++.++++++.+.+.|++++++.+..|.|+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~--------~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~ 322 (393)
T PRK05764 254 KELIKAMSKLQSHSTSNPTSIAQYAAVAALN---GP--------QDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGA 322 (393)
T ss_pred HHHHHHHHHHHhhcccCCChHHHHHHHHHHc---CC--------hHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcc
Confidence 9999999888776778899999999999886 22 578889999999999999999998856777778888
Q ss_pred ccccccccCCCCCceEEeecCcc-------HHHH-HHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhh
Q 012785 383 FCTFLGRAFEPQPAFAWLKCEQE-------IEDC-ESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKI 454 (456)
Q Consensus 383 ~~~~~~~~~~~~~~f~~~~~~~~-------~~~~-~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~ 454 (456)
+ |+|++++.. ..++ ..+++++||.++||..|+. ++++||+++.+++++++++++|+++
T Consensus 323 ~-------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~-~~~vRis~~~~~~~~~~~i~~l~~~ 388 (393)
T PRK05764 323 F-------------YVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGA-PGYVRLSYATSLEDLEEGLERIERF 388 (393)
T ss_pred e-------------EEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCC-CCEEEEEecCCHHHHHHHHHHHHHH
Confidence 7 899988641 2444 4555778999999999976 8999999988999999999999987
Q ss_pred hC
Q 012785 455 LS 456 (456)
Q Consensus 455 l~ 456 (456)
++
T Consensus 389 ~~ 390 (393)
T PRK05764 389 LE 390 (393)
T ss_pred HH
Confidence 63
No 69
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2e-41 Score=336.73 Aligned_cols=313 Identities=16% Similarity=0.214 Sum_probs=245.3
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccC
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTG 171 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G 171 (456)
.+.++++|+.|+|++++|+.+.++... .+ .. ...|++. + .++||++||++++. ++++|++|+|
T Consensus 18 ~~~~~i~l~~~~~~~~~p~~~~~a~~~-~~-~~---~~~y~~~-~-----~~~lr~~ia~~~~~------~~~~i~it~G 80 (356)
T PRK08056 18 SPDQLLDFSANINPLGMPVSLKRAIID-NL-DC---AERYPDV-E-----YRHLHQALARHHQV------PASWILAGNG 80 (356)
T ss_pred ChhhEEEeccccCCCCCCHHHHHHHHH-HH-Hh---cccCcCc-c-----HHHHHHHHHHHhCc------ChhhEEECCC
Confidence 346789999999998887766543221 11 11 2357764 4 49999999999853 4679999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc-ccc---------cCCCeEEEEcCCCCC
Q 012785 172 STQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK-RFN---------KDGPYIELVTSPNNP 241 (456)
Q Consensus 172 ~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~l~---------~~~~~~i~v~~P~NP 241 (456)
+++++.++++++ .+|+ +++++|+|..|...++..|++++.++.+.+ ++. ..++++++++|||||
T Consensus 81 a~~~l~~~~~~l-~~g~-----viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~k~v~l~~p~NP 154 (356)
T PRK08056 81 ETESIFAVVSGL-KPRR-----AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAILEALTPDLDCLFLCTPNNP 154 (356)
T ss_pred HHHHHHHHHHHh-CCCC-----EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCccHHHHHhccCCCCEEEEeCCcCC
Confidence 999999999887 5654 778899999999999999999998876532 221 136789999999999
Q ss_pred CcccchH--------HhhhcCcEEEeeecCCCCCCC-----CCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHH
Q 012785 242 DGSVRQS--------VVNRSGGILVHDLAYYWPQYT-----SITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKK 308 (456)
Q Consensus 242 tG~~~~~--------l~~~~~~~iI~De~y~~~~~~-----~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~ 308 (456)
||.++++ +|++++++||+||+|.+..+. +.....+++++++||||.||++|+|+||++++++++++.
T Consensus 155 TG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~ 234 (356)
T PRK08056 155 TGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVAR 234 (356)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHH
Confidence 9999982 678899999999999763221 222335689999999999999999999999865788888
Q ss_pred HHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccccccc
Q 012785 309 MTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLG 388 (456)
Q Consensus 309 l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~ 388 (456)
+++.. ..++++.+.|.++..+++ + .+++++.++.++++|+.+.+.|+.++.+.+.++ +
T Consensus 235 l~~~~--~~~~~~~~~~~~a~~~l~----~--------~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~------- 292 (356)
T PRK08056 235 MRRQQ--MPWSINAFAALAGEVILQ----D--------RAYQQATWQWLAEEGARFYQALCALPLLTVWPG-R------- 292 (356)
T ss_pred HHHhC--CCCchhHHHHHHHHHHhC----C--------HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-C-------
Confidence 87654 367788899999888886 2 567888899999999999999988754444322 3
Q ss_pred ccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCC-CCCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 389 RAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFG-FSPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 389 ~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg-~~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
++|+|++++.+...+.+.|.++||.+++|..|+ ...++|||++ .++++.+.+++.|+++++
T Consensus 293 ------~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~-~~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 293 ------ANYLFLRCERPDIDLQRALLTQRILIRSCANYPGLDSRYYRVAI-RSAAENERLLAALRNVLT 354 (356)
T ss_pred ------CcEEEEEcCCChHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEE-cCHHHHHHHHHHHHHHHc
Confidence 348999987555667788889999999999994 4567999999 567888999999988763
No 70
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=1.2e-41 Score=346.29 Aligned_cols=400 Identities=14% Similarity=0.115 Sum_probs=272.7
Q ss_pred CcchhhHHHHHHHHHH-HHHHHHHHhcCccCCCCchhhHHHHhh----hhhccccCCCceeecccccccccCCCCCCccc
Q 012785 6 PLFSLKNLLVVSLALN-VSLIWRAMHESEKCNFDSSFSLQQQRR----SVMAGCVLKEKEHVSERTHLSLSSSPSPSPSS 80 (456)
Q Consensus 6 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~w~~~~~~~~~~----~~~~~c~~~g~~~~~~~~~~~~~~~~~~~~~~ 80 (456)
|.|-+|+.| ..++-. ...-...|+-|+-+|.|......||=- =|...|...+...-+ .-|++... ..
T Consensus 2 s~fe~~~~~-~~~~~~~~~~~~~~l~agrgnpn~~~~~~r~af~~~~~f~~~e~~~~~~~~~~---~~g~~~~~----g~ 73 (521)
T TIGR03801 2 SPFELKDEL-IKLAKSTKKSDRTMLNAGRGNPNWTATTPREAFFLLGQFAVEETRRSWSYPGG---LGGMPQKE----GI 73 (521)
T ss_pred CchhHHHHH-HHHHhhcccccceeeeCCCCCcccccCcHHHHHHHHHHHHHHHHHHhhccccC---cCCCcCcc----hH
Confidence 578888887 555421 112233455788889997666554432 122233333322111 00111111 12
Q ss_pred cccccchhhhcCC-------CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHH-HH
Q 012785 81 SLTSTDIQSQDGG-------ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVV-RL 152 (456)
Q Consensus 81 ~~~~~~~~~~~~~-------~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia-~~ 152 (456)
..++...+....+ +++|+|+.|+|++++++++.+. . ..+. + . .|+++.| .++++++++ +|
T Consensus 74 ~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~~~~~~~~~~~-~-~~~~-~---~-~Y~~p~g-----~~~~~e~iv~~y 141 (521)
T TIGR03801 74 EERFETFLAENKSQPGAEFLRDIISYVIDQLGFDPDAFLYEM-C-DGII-G---D-NYPVPDR-----MLPHSEKIVHQY 141 (521)
T ss_pred HHHHHHHHHhCCCCchHHHHHHHHhhcCCCCCCCCCHHHHHH-H-HHhh-c---C-CCCCCCC-----CHHHHHHHHHHH
Confidence 2232222111111 2569999999999977666432 1 1121 1 1 4765555 378887777 46
Q ss_pred HHHh-cCccCCCc--eEEEccCHHHHHHHHHHH-----hcCCCCCCCcEEEEeCCCCCChhhhhhhc--CCeEeeeccC-
Q 012785 153 HKVV-GNAITENH--HIVVGTGSTQLFQAALYA-----LSSQDASEPISVVSAAPYYSSYPSITDCV--KSRLYKWAGD- 221 (456)
Q Consensus 153 ~~~~-g~~~~~~~--~I~~t~G~~~al~~~~~~-----l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~--g~~~~~~~~d- 221 (456)
+... +....+++ +|++|+|+++++..++.+ ++.+|| +|++++|+|+.|...++.. |.+++.++.+
T Consensus 142 ~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~pGD----~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~ 217 (521)
T TIGR03801 142 LIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKGD----KIALMTPIFTPYLEIPELPRYDFEVVRIKADE 217 (521)
T ss_pred HHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCCCCC----EEEEeCCCcHHHHHHHHHhcCCcEEEEeeccc
Confidence 6543 33333344 899999999999999887 689999 9999999999999998876 6776655443
Q ss_pred ------------cccccc---CCCeEEEEcCCCCCCcccchH--------Hhhhc--CcEEEeeecCCCCC--CCCCC-C
Q 012785 222 ------------AKRFNK---DGPYIELVTSPNNPDGSVRQS--------VVNRS--GGILVHDLAYYWPQ--YTSIT-Y 273 (456)
Q Consensus 222 ------------~~~l~~---~~~~~i~v~~P~NPtG~~~~~--------l~~~~--~~~iI~De~y~~~~--~~~~~-~ 273 (456)
.+.++. .++++++++|||||||.++++ +|+++ +++||+||+|.+.. +.++. .
T Consensus 218 ~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~ 297 (521)
T TIGR03801 218 MTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAE 297 (521)
T ss_pred ccccccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhh
Confidence 333432 367999999999999999993 67765 99999999998632 23332 3
Q ss_pred CCCCcEEEecCccccCCCCceEEEEEEeCHHHHHH------------H------------------------HHHHhhcc
Q 012785 274 PADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKK------------M------------------------TKYIELNT 317 (456)
Q Consensus 274 ~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~------------l------------------------~~~~~~~~ 317 (456)
.++++|+++||||.||++|||+||++++++.+.++ + ++.....+
T Consensus 298 ~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~ 377 (521)
T TIGR03801 298 LPYNTIGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHT 377 (521)
T ss_pred CCCCEEEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhcc
Confidence 45799999999999999999999999974332221 1 34455567
Q ss_pred CcCChHHHH--H---HHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCC
Q 012785 318 IGVSKDSQL--R---AAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFE 392 (456)
Q Consensus 318 ~~~s~~~q~--~---a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~ 392 (456)
.|.|.+.|. + +.++++ .. +++++.+++.+++|++.+.+.| ... +...++.|+|
T Consensus 378 ~g~s~p~Q~q~al~a~~all~---~~--------~~y~~~~~~~~~~R~~~l~~~L-g~~-~~~~~~~g~~--------- 435 (521)
T TIGR03801 378 AGLSTPQQVQMALFSLFALMD---KE--------NAYKAETKDICRRREKLLFRGL-GLP-LQEDPNDVAY--------- 435 (521)
T ss_pred CCCCcHHHHHHHHHHHHHHhc---cc--------hhHHHHHHHHHHHHHHHHHHhc-CCC-CcCCCCCeEE---------
Confidence 888888887 2 333443 22 6789999999999999999988 221 2335678888
Q ss_pred CCCceEEeecCc-------------------cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC-ChhHHHHHHHHHH
Q 012785 393 PQPAFAWLKCEQ-------------------EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD-RDENYNLFVQRLS 452 (456)
Q Consensus 393 ~~~~f~~~~~~~-------------------~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~-~~e~i~~~l~~L~ 452 (456)
|+|++++. +.+.+.++++++||.+.||..||..++++|||++. +++++.++.++|+
T Consensus 436 ----Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl~ 511 (521)
T TIGR03801 436 ----YTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLANLNEYDYAEIGRAIR 511 (521)
T ss_pred ----EEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Confidence 89998852 34567788889999999999999767899999985 8889999999999
Q ss_pred hhh
Q 012785 453 KIL 455 (456)
Q Consensus 453 ~~l 455 (456)
+++
T Consensus 512 ~~~ 514 (521)
T TIGR03801 512 KIL 514 (521)
T ss_pred HHH
Confidence 886
No 71
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=8.1e-41 Score=331.60 Aligned_cols=312 Identities=17% Similarity=0.208 Sum_probs=247.3
Q ss_pred cCCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEcc
Q 012785 91 DGGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGT 170 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~ 170 (456)
..+.+++||+.++|++.+|+.+.+..... + . ....|++..| .++||++++++++. ++++|++|+
T Consensus 19 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~-~---~~~~Y~~~~g-----~~~lr~aia~~~~~------~~~~I~it~ 82 (349)
T PRK07908 19 DAGPGLLDFAVNVRHDTPPEWLRERLAAR-L-G---DLAAYPSTED-----ERRARAAVAARHGR------TPDEVLLLA 82 (349)
T ss_pred cCCCCeEEecCCCCCCCCCHHHHHHHHHH-h-h---HhhcCCCccc-----hHHHHHHHHHHhCc------ChhhEEECC
Confidence 34568999999999888777665432211 1 1 1346888888 59999999999863 468999999
Q ss_pred CHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc-ccc----cCCCeEEEEcCCCCCCccc
Q 012785 171 GSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK-RFN----KDGPYIELVTSPNNPDGSV 245 (456)
Q Consensus 171 G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~l~----~~~~~~i~v~~P~NPtG~~ 245 (456)
|+++++.++++ + .++ .++++.|+|..+...++..|++++.+++|.+ +++ ..++++++++|||||||.+
T Consensus 83 Ga~~al~~~~~-l-~~~-----~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l~~~~~~i~l~np~NPTG~~ 155 (349)
T PRK07908 83 GAAEGFALLAR-L-RPR-----RAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAVPDDADLVVIGNPTNPTSVL 155 (349)
T ss_pred CHHHHHHHHHh-c-CCC-----eEEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHhccCCCEEEEcCCCCCCCCC
Confidence 99999999988 4 554 6888999999999999999999998877643 222 1357899999999999999
Q ss_pred chH-----HhhhcCcEEEeeecCCCC---CCCCCC-CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhc
Q 012785 246 RQS-----VVNRSGGILVHDLAYYWP---QYTSIT-YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELN 316 (456)
Q Consensus 246 ~~~-----l~~~~~~~iI~De~y~~~---~~~~~~-~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~ 316 (456)
++. +|+ ++.++|+||+|.+. ...++. ...+++++++||||.||++|+|+||++++ +++++.+.+...
T Consensus 156 ~~~~~l~~l~~-~~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~-~~~~~~~~~~~~-- 231 (349)
T PRK07908 156 HPAEQLLALRR-PGRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGA-PDVLARLTRGRA-- 231 (349)
T ss_pred cCHHHHHHHHh-cCCEEEEECcchhhccCCccccccccCCCEEEEeecccccCCccceeeeeecC-HHHHHHHHhcCC--
Confidence 984 564 57889999999752 112222 23467999999999999999999999996 999999887754
Q ss_pred cCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCc
Q 012785 317 TIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPA 396 (456)
Q Consensus 317 ~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 396 (456)
.+..+++.|.++..++. +. ..+++++.++.++++|+.+.+.|+++ ++.+..|.+++
T Consensus 232 ~~~~~~~~~~a~~~~~~---~~-------~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~------------- 287 (349)
T PRK07908 232 HWPVGTLQLEAIAACCA---PR-------AVAEAAADAARLAADRAEMVAGLRAV-GARVVDPAAAP------------- 287 (349)
T ss_pred CCCccHHHHHHHHHHhc---cc-------chHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCce-------------
Confidence 46677888877777665 22 25688899999999999999999987 46666666666
Q ss_pred eEEeecCccHHHHHHHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 397 FAWLKCEQEIEDCESFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 397 f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
|+|++++. .+.+.+.|+++||.++||..|+. ++++|||++ .++++++++++.|++++
T Consensus 288 ~~~~~~~~-~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~-~~~~~~~~l~~al~~~~ 345 (349)
T PRK07908 288 FVLVRVPD-AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV-RPRAEVPVLVQALAEIL 345 (349)
T ss_pred EEEEECCc-HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe-CCCccHHHHHHHHHHHH
Confidence 99999974 56788889999999999999953 578999999 57778899999998875
No 72
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=6.8e-41 Score=337.60 Aligned_cols=321 Identities=17% Similarity=0.169 Sum_probs=242.1
Q ss_pred CCeEEecCCC---CCCCch--hHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceE--
Q 012785 94 ERIINVDHGD---PTMYEK--YWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHI-- 166 (456)
Q Consensus 94 ~~~i~l~~g~---p~~~~~--~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I-- 166 (456)
.++|||+.|. |++..| +.+.+... .....+ ....|++..| .++||++|++|+...+.....+++|
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~-~~~~~~--~~~~Y~~~~G-----~~~lR~aia~~~~~~~~~~~~~~~i~v 97 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEA-RLLETE--TTKNYLPIEG-----LAAYRQAVQELLFGADSPALAAGRVAT 97 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHH-Hhcccc--cCCCcCCCCC-----CHHHHHHHHHHhcCCCCcccccCeEEE
Confidence 4689999995 444444 33333211 112222 2346999999 5999999999996555443235676
Q ss_pred EEccCHHHHHHHHHHHh--cCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc-C-------cccccc------CCC
Q 012785 167 VVGTGSTQLFQAALYAL--SSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG-D-------AKRFNK------DGP 230 (456)
Q Consensus 167 ~~t~G~~~al~~~~~~l--~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-d-------~~~l~~------~~~ 230 (456)
++|+|+++++.++++++ +++|| +|++++|+|+.|...++..|++++.++. | .+.++. .+.
T Consensus 98 ~iT~Ga~~al~~~~~~l~~~~pGd----~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~ 173 (396)
T PRK09257 98 VQTPGGTGALRVGADFLKRAFPDA----KVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGD 173 (396)
T ss_pred EecCCccHHHHHHHHHHHHhCCCC----eEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCC
Confidence 99999999999998776 47999 9999999999999999999999998775 2 222321 124
Q ss_pred eEEEEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCCC------CC---CCCCCCcEEEecCccccCCCCc
Q 012785 231 YIELVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQYT------SI---TYPADHDLMLFTVSKSTGHAGT 293 (456)
Q Consensus 231 ~~i~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~~------~~---~~~~~~~i~i~S~SK~~g~~G~ 293 (456)
++++++|||||||.++++ +|++++++||+||+|.+..+. ++ ....+++|+++||||+|+++|+
T Consensus 174 ~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~Gl 253 (396)
T PRK09257 174 VVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGE 253 (396)
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccc
Confidence 667779999999999993 788999999999999864331 11 1234689999999999998999
Q ss_pred eEEEEEE--eCHH----HHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 012785 294 RIGWALV--KDME----VAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMA 367 (456)
Q Consensus 294 RiG~l~~--~~~~----~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 367 (456)
|+||+++ ++++ +..++.........+++.+.|.++..+|. ++... ..++++++++++.++++|+.+.+.
T Consensus 254 RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~--~~~~~~~~~~r~~~~~rr~~l~~~ 328 (396)
T PRK09257 254 RVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILN---DPELR--AEWEAELEEMRERIKAMRQLLVEA 328 (396)
T ss_pred cceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhC---CHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999984 3344 33444444444456678999999999887 22000 012578889999999999999999
Q ss_pred HHhcC---CccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC-ChhH
Q 012785 368 VQKSG---LFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD-RDEN 443 (456)
Q Consensus 368 L~~~~---~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~-~~e~ 443 (456)
|++.+ .+++..|+||+ |+|++++ .+.+.++++++||.+.|. + ||+|+. ++++
T Consensus 329 L~~~~~~~~~~~~~p~gg~-------------~~w~~l~--~~~~~~l~~~~~V~~~p~-------~--ri~~~~~~~~~ 384 (396)
T PRK09257 329 LKAKGPSRDFDFIARQRGM-------------FSYSGLT--PEQVDRLREEFGVYAVGS-------G--RINVAGLNESN 384 (396)
T ss_pred HHhcCCCCCcccccccceE-------------EEecCCC--HHHHHHHHHcCCEEEcCC-------C--eEEEeeCCHHH
Confidence 99874 36777888998 9999984 467788889999999882 2 999985 9999
Q ss_pred HHHHHHHHHhhh
Q 012785 444 YNLFVQRLSKIL 455 (456)
Q Consensus 444 i~~~l~~L~~~l 455 (456)
+++++++|++++
T Consensus 385 i~~~~~~i~~~~ 396 (396)
T PRK09257 385 IDYVAEAIAAVL 396 (396)
T ss_pred HHHHHHHHHhhC
Confidence 999999999864
No 73
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.7e-41 Score=328.88 Aligned_cols=305 Identities=18% Similarity=0.258 Sum_probs=240.9
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccC
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTG 171 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G 171 (456)
.+.++|+|+.|+|++++|+.+.+..... +..+ ...+|+++ | .++||++|++|++..+ . ++++|++|+|
T Consensus 17 ~~~~~i~l~~~~~~~~~p~~~~~~~~~~-~~~~--~~~~Y~~~-~-----~~~Lr~aia~~~~~~~--~-~~~~i~it~G 84 (335)
T PRK14808 17 EKRDRTYLALNENPFPFPEDLVDEVFRR-LNSD--TLRIYYDS-P-----DEELIEKILSYLDTDF--L-SKNNVSVGNG 84 (335)
T ss_pred CCCceeEecCCCCCCCCCHHHHHHHHHH-hhhh--hhhcCCCC-C-----hHHHHHHHHHHhCCCC--C-CcceEEEcCC
Confidence 4468899999999999888776543221 2222 13446665 5 5999999999997544 2 4689999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCccccc----cCCCeEEEEcCCCCCCcccch
Q 012785 172 STQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKRFN----KDGPYIELVTSPNNPDGSVRQ 247 (456)
Q Consensus 172 ~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~----~~~~~~i~v~~P~NPtG~~~~ 247 (456)
++++|.++++++ | +|++++|+|+.|...++..|++++.+++|.+... ..++++++++|||||||.+++
T Consensus 85 a~~~i~~~~~~~----d----~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~i~i~nP~NPTG~~~s 156 (335)
T PRK14808 85 ADEIIYVMMLMF----D----RSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFE 156 (335)
T ss_pred HHHHHHHHHHHh----C----cEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhHccCCCEEEEeCCCCCCCCCcC
Confidence 999999999887 5 7999999999999999999999999887654321 124689999999999999999
Q ss_pred H-----HhhhcCcEEEeeecCCCCC---CCCCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCc
Q 012785 248 S-----VVNRSGGILVHDLAYYWPQ---YTSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIG 319 (456)
Q Consensus 248 ~-----l~~~~~~~iI~De~y~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~ 319 (456)
+ ++ +++++||+||+|.+.. ..+.....+++|+++||||+||++|+|+||++++ +++++.+.+.+. .++
T Consensus 157 ~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~-~~~~~~l~~~~~--~~~ 232 (335)
T PRK14808 157 REEIERIL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSS-EKFIDAYNRVRL--PFN 232 (335)
T ss_pred HHHHHHHH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEEeC-HHHHHHHHHhcC--CCC
Confidence 4 55 5799999999998642 1122234578999999999999999999999997 899999987763 578
Q ss_pred CChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEE
Q 012785 320 VSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAW 399 (456)
Q Consensus 320 ~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~ 399 (456)
++.++|.++..+++ + .++.++.++.++++++.+.+.|++.+ +.+.++. ++|+|
T Consensus 233 ~~~~~q~a~~~~l~---~---------~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~--------------g~f~~ 285 (335)
T PRK14808 233 VSYVSQMFAKVALD---H---------REIFEERTKFIVEERERMKSALREMG-YRITDSR--------------GNFVF 285 (335)
T ss_pred CCHHHHHHHHHHHh---C---------HHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCC--------------CeEEE
Confidence 89999999988886 2 34566777888888999999999875 4444443 34789
Q ss_pred eecCc-cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhh
Q 012785 400 LKCEQ-EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKI 454 (456)
Q Consensus 400 ~~~~~-~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~ 454 (456)
++++. +...+.+.|.++||.|+. | .+++||++ .++++++++++.|+++
T Consensus 286 ~~l~~~~~~~~~~~l~~~Gi~V~~---~---~~~~Risi-~~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 286 IFMEKEEKERLLEHLRAKNIAVRS---F---REGVRITI-GKREENDMILKELEVF 334 (335)
T ss_pred EeCCCccHHHHHHHHHHCCeEEEE---C---CCCeEEec-CCHHHHHHHHHHHHhh
Confidence 99863 456788899999999995 3 46899998 5678899999999864
No 74
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-40 Score=332.47 Aligned_cols=315 Identities=20% Similarity=0.203 Sum_probs=240.7
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHh---cCccCCCceEEEcc
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVV---GNAITENHHIVVGT 170 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~---g~~~~~~~~I~~t~ 170 (456)
+.+++|+.|+|++++++.+.+.... .+..+. ....|++ .| .++||++||+|++.. |..+. +++|++|+
T Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~Y~~-~G-----~~~Lr~aia~~~~~~~~~~~~v~-~~~I~it~ 98 (374)
T PRK02610 28 IQLDRLDTNEFPYDLPPDLKQKLAW-LYQQGI-ESNRYPD-GG-----HEALKQAIAEYVNESAAGSSQIT-PANISVGN 98 (374)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHH-HHhhcc-cccCCCC-Cc-----hHHHHHHHHHHhCccccccCCCC-HHHEEEcC
Confidence 3589999999999888776654221 112221 1235766 57 599999999999653 34454 57999999
Q ss_pred CHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc-------ccccc-------CCCeEEEEc
Q 012785 171 GSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA-------KRFNK-------DGPYIELVT 236 (456)
Q Consensus 171 G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~-------~~l~~-------~~~~~i~v~ 236 (456)
|+++++..++.+++.+||. +|++++|+|+.|...++..|++++.++.|. +.++. .++++++++
T Consensus 99 Ga~~al~~~~~~~~~~g~~---~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~ 175 (374)
T PRK02610 99 GSDELIRSLLIATCLGGEG---SILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVV 175 (374)
T ss_pred ChHHHHHHHHHHHcCCCCC---eEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEe
Confidence 9999999888887777742 799999999999999999999998877543 33322 367999999
Q ss_pred CCCCCCcccchH-----Hhh-hcCcEEEeeecCCCCCCCC-CC--CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHH
Q 012785 237 SPNNPDGSVRQS-----VVN-RSGGILVHDLAYYWPQYTS-IT--YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAK 307 (456)
Q Consensus 237 ~P~NPtG~~~~~-----l~~-~~~~~iI~De~y~~~~~~~-~~--~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~ 307 (456)
|||||||.+++. +++ .++++||+||+|.+..+.+ +. ...+++|+++||||+||+||+|+||++++ +++++
T Consensus 176 ~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~-~~l~~ 254 (374)
T PRK02610 176 HPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGH-PELIA 254 (374)
T ss_pred CCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccceeeeecC-HHHHH
Confidence 999999999994 322 2589999999998643221 11 23467899999999999999999999996 99999
Q ss_pred HHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccc
Q 012785 308 KMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFL 387 (456)
Q Consensus 308 ~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~ 387 (456)
.+.+.+. .++++.+.|.++..+|+ + .+.+.+.+++.+++ |+.+.+.|+.++.+.+ .|++++
T Consensus 255 ~l~~~~~--~~~~~~~~q~a~~~~l~---~--------~~~~~~~~~~~~~~-r~~l~~~L~~~~~~~~-~p~~g~---- 315 (374)
T PRK02610 255 VLEKVRL--PYNLPSFSQLAAQLALE---H--------RQELLAAIPEILQE-RDRLYQALQELPQLRV-WPSAAN---- 315 (374)
T ss_pred HHHHhcC--CCCCCHHHHHHHHHHhc---C--------HHHHHHHHHHHHHH-HHHHHHHHHhCCCcEe-CCCcce----
Confidence 9988763 57789999999998886 2 25666766666655 6778888987654443 355555
Q ss_pred cccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 388 GRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 388 ~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
|+|++++. +...+.+.++++||.|+++ ++++||+++. ++++++++++|+++++
T Consensus 316 ---------f~~~~l~~~~~~~~~~~~l~~~gi~v~~~------~~~lRls~~~-~~~~~~~l~~l~~~l~ 370 (374)
T PRK02610 316 ---------FLYLRLSQDAALAALHQALKAQGTLVRHT------GGGLRITIGT-PEENQRTLERLQAALT 370 (374)
T ss_pred ---------EEEEeCCCCCCHHHHHHHHHHCCEEEEeC------CCeEEEeCCC-HHHHHHHHHHHHHHHh
Confidence 99999964 5677788889999999873 5789999964 5678999999998763
No 75
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-40 Score=331.73 Aligned_cols=308 Identities=17% Similarity=0.225 Sum_probs=245.0
Q ss_pred CCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCH
Q 012785 93 GERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGS 172 (456)
Q Consensus 93 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~ 172 (456)
+.++|+|+.|+|++.+++.+.+.. ... .....|+++ + .++||++|+++++. ++++|++|+|+
T Consensus 51 ~~~~i~l~~n~~p~~~~~~v~~a~-----~~~-~~~~~Yp~~-~-----~~~lr~~ia~~~~~------~~~~I~~t~Ga 112 (380)
T PLN03026 51 PEDIVKLDANENPYGPPPEVLEAL-----GNM-KFPYVYPDP-E-----SRRLRAALAEDSGL------ESENILVGCGA 112 (380)
T ss_pred ccceEEccCCCCCCCCCHHHHHHH-----Hhh-HhhccCCCC-C-----HHHHHHHHHHHhCc------ChhhEEEcCCH
Confidence 468899999998887776655431 111 112458775 4 48999999999963 56799999999
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC------ccccc----cCCCeEEEEcCCCCCC
Q 012785 173 TQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD------AKRFN----KDGPYIELVTSPNNPD 242 (456)
Q Consensus 173 ~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d------~~~l~----~~~~~~i~v~~P~NPt 242 (456)
++++.+++.+++++|| +|++++|+|+.|...++..|++++.++.+ .+.++ ..++++++++||||||
T Consensus 113 ~~~i~~~~~~~~~~gd----~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPT 188 (380)
T PLN03026 113 DELIDLLMRCVLDPGD----KIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPD 188 (380)
T ss_pred HHHHHHHHHHhcCCCC----EEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhccCCcEEEEeCCCCCC
Confidence 9999999999999999 99999999999999999999998877653 33332 3467999999999999
Q ss_pred cccchH-----HhhhcCcEEEeeecCCCCCCC----CCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHH
Q 012785 243 GSVRQS-----VVNRSGGILVHDLAYYWPQYT----SITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYI 313 (456)
Q Consensus 243 G~~~~~-----l~~~~~~~iI~De~y~~~~~~----~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~ 313 (456)
|.+++. +++.. +++|+||+|.+..+. ......+++|+++||||.||++|+|+||++++ +++++.+.+.+
T Consensus 189 G~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~-~~~i~~l~~~~ 266 (380)
T PLN03026 189 GSIISDDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAK 266 (380)
T ss_pred CCCCCHHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecC-HHHHHHHHHhc
Confidence 999983 56544 899999999853221 11134578999999999999999999999997 99999998876
Q ss_pred hhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCC
Q 012785 314 ELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEP 393 (456)
Q Consensus 314 ~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~ 393 (456)
. .++++.++|.++.++|+ + .+++++.++.++++|+.+.+.|++++.+.+ .|.++
T Consensus 267 ~--~~~~~~~~q~aa~~aL~---~---------~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~----------- 320 (380)
T PLN03026 267 Q--PYNVSVAAEVAACAALS---N---------PKYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDA----------- 320 (380)
T ss_pred C--CCCCCHHHHHHHHHHhh---C---------HHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCC-----------
Confidence 4 57889999999999987 2 467889999999999999999998764332 33444
Q ss_pred CCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhh
Q 012785 394 QPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKI 454 (456)
Q Consensus 394 ~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~ 454 (456)
+|+|++++. +...+.+.|.++||.|+++..++ .++++|||++ ++++++.+++.|+++
T Consensus 321 --~f~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~-~~~~lRis~~-~~~~~~~l~~al~~~ 379 (380)
T PLN03026 321 --NFILCRVTSGRDAKKLKEDLAKMGVMVRHYNSKE-LKGYIRVSVG-KPEHTDALMEALKQL 379 (380)
T ss_pred --eEEEEECCCCCCHHHHHHHHHHCCeEEEECCCCC-CCCEEEEecC-CHHHHHHHHHHHHHh
Confidence 499999863 45677888889999999987654 4679999995 667788888888764
No 76
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.4e-41 Score=333.25 Aligned_cols=309 Identities=20% Similarity=0.280 Sum_probs=245.8
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGST 173 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~ 173 (456)
.++++|+.|+|++.+++.+.+... .......+|++ .| .++||+++|++++. ++++|++|+|++
T Consensus 29 ~~~i~l~~n~~~~~~~~~v~~a~~-----~~~~~~~~~p~-~g-----~~~lr~~ia~~~~~------~~~~i~~t~G~~ 91 (359)
T PRK03158 29 EKIVKLASNENPYGPSPKVKEAIA-----AHLDELALYPD-GY-----APELRTKVAKHLGV------DEEQLLFGAGLD 91 (359)
T ss_pred CceEEecCCCCCCCCCHHHHHHHH-----HHHHHhhcCCC-Cc-----HHHHHHHHHHHhCC------CHHHEEECCCHH
Confidence 478999999998866655543321 11112334554 56 59999999999953 457999999999
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC-----cccccc---CCCeEEEEcCCCCCCccc
Q 012785 174 QLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD-----AKRFNK---DGPYIELVTSPNNPDGSV 245 (456)
Q Consensus 174 ~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d-----~~~l~~---~~~~~i~v~~P~NPtG~~ 245 (456)
+++.+++++++++|| +|++++|+|+.+...+...|.++..++.+ .+.++. .++++++++|||||||.+
T Consensus 92 ~~l~~~~~~~~~~gd----~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~ 167 (359)
T PRK03158 92 EVIQMISRALLNPGT----NTVMAEPTFSQYRHNAIIEGAEVREVPLKDGGHDLEAMLKAIDEQTKIVWICNPNNPTGTY 167 (359)
T ss_pred HHHHHHHHHHhCCCC----EEEEcCCCHHHHHHHHHHcCCeEEEEecCCCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCC
Confidence 999999999999999 99999999999999999999999887754 333332 367899999999999999
Q ss_pred chH-----Hhhh--cCcEEEeeecCCCCCCC----C---CCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHH
Q 012785 246 RQS-----VVNR--SGGILVHDLAYYWPQYT----S---ITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTK 311 (456)
Q Consensus 246 ~~~-----l~~~--~~~~iI~De~y~~~~~~----~---~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~ 311 (456)
++. +++. +++++|+||+|.+..+. + .....+++|+++||||.||++|+|+||++++ +++++++.+
T Consensus 168 ~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~-~~~~~~~~~ 246 (359)
T PRK03158 168 VNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIAS-EELIEKLNI 246 (359)
T ss_pred CCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCC-HHHHHHHHH
Confidence 983 5554 69999999999753221 1 1123578999999999999999999999997 999999988
Q ss_pred HHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccC
Q 012785 312 YIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAF 391 (456)
Q Consensus 312 ~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~ 391 (456)
... ++++|.++|.++.++|+ + .+++++.++.++++++.+.+.|++.+ +.+. +.++
T Consensus 247 ~~~--~~~~~~~~q~~~~~~l~---~---------~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~-~~~g--------- 301 (359)
T PRK03158 247 ARP--PFNTTRIAQYAAIAALE---D---------QAFLKECVEKNAEGLEQYYAFCKEYG-LFYY-PSQT--------- 301 (359)
T ss_pred hcC--CCCCCHHHHHHHHHHhc---C---------HHHHHHHHHHHHHHHHHHHHHHHHCC-CeeC-CCcC---------
Confidence 764 57899999999999997 2 46788888889999999999998863 4433 2233
Q ss_pred CCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 392 EPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 392 ~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
+|+|++++.+...+.+.|.++||.++||+.|+. ++++||+++ +++++++++++|++++
T Consensus 302 ----~~i~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~-~~~iRi~~~-~~~~~~~l~~al~~~~ 359 (359)
T PRK03158 302 ----NFIFVDTGRDANELFEALLKKGYIVRSGAALGF-PTGVRITIG-LKEQNDKIIELLKELL 359 (359)
T ss_pred ----cEEEEECCCCHHHHHHHHHHCCeEEeeCCCCCC-CCeEEEecC-CHHHHHHHHHHHHHhC
Confidence 389999865566777878889999999999974 789999994 7889999999998864
No 77
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-40 Score=328.64 Aligned_cols=305 Identities=15% Similarity=0.157 Sum_probs=240.1
Q ss_pred CeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHH
Q 012785 95 RIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQ 174 (456)
Q Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~ 174 (456)
..++++.+++.+.+++. . .. ....|+++. .++||++||++++. ++++|++|+|+++
T Consensus 32 ~~~~~~~ne~~~~~~~~--~-------~~---~~~~Y~~~~------~~~lr~~ia~~~~~------~~~~I~~t~G~~~ 87 (364)
T PRK04781 32 GDVWLNANESAWANPAD--P-------DA---STRRYPDPQ------PPGLRSALAALYGC------APEQLLIGRGSDE 87 (364)
T ss_pred CCEEeeCCCCCCCCChh--h-------cc---hhccCCCCC------HHHHHHHHHHHhCc------ChHHEEEeCCHHH
Confidence 45889988877765531 0 01 134688876 38999999999863 4679999999999
Q ss_pred HHHHHHHHhcCCC-CCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC---------ccccc----cCCCeEEEEcCCCC
Q 012785 175 LFQAALYALSSQD-ASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD---------AKRFN----KDGPYIELVTSPNN 240 (456)
Q Consensus 175 al~~~~~~l~~~g-d~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d---------~~~l~----~~~~~~i~v~~P~N 240 (456)
+|.+++++++.+| + +|++++|+|..|...++..|.+++.++++ .+.+. ..++++++++||||
T Consensus 88 ~l~~~~~~~~~~g~~----~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~N 163 (364)
T PRK04781 88 AIDLLVRALCVPGRD----AVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSN 163 (364)
T ss_pred HHHHHHHHhcCCCCC----eEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCC
Confidence 9999999999888 7 89999999999999999999999888763 12221 23678999999999
Q ss_pred CCcccchH-----Hhh--hcCcEEEeeecCCCCCCC----CCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHH
Q 012785 241 PDGSVRQS-----VVN--RSGGILVHDLAYYWPQYT----SITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKM 309 (456)
Q Consensus 241 PtG~~~~~-----l~~--~~~~~iI~De~y~~~~~~----~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l 309 (456)
|||.+++. +++ +++++||+||+|.+..+. +.....+++|+++||||+||+||+|+||++++ +++++.+
T Consensus 164 PTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~-~~l~~~l 242 (364)
T PRK04781 164 PAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIAN-AELIAVL 242 (364)
T ss_pred CCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhcccccceeeeeeCC-HHHHHHH
Confidence 99999983 443 247899999999864332 12244578999999999999999999999997 9999999
Q ss_pred HHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccc
Q 012785 310 TKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGR 389 (456)
Q Consensus 310 ~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~ 389 (456)
.+.+. .++++.+.|.++..+|+ ++. .++..+.++.++++|+.+.+.|++++++....|.+
T Consensus 243 ~~~~~--~~~~~~~~~~~a~~~l~---~~~-------~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~-------- 302 (364)
T PRK04781 243 RRCQA--PYPVPTPCAALAEQALS---APA-------LAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQ-------- 302 (364)
T ss_pred HhccC--CCCCCHHHHHHHHHHHh---ccc-------HHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCC--------
Confidence 98865 67889999999998887 331 24455566678999999999998875443223334
Q ss_pred cCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 390 AFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 390 ~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
++|+|++++ +.+.+.+.++++||.|+||..|+..++++||++ ..+++++.+++.|+++.
T Consensus 303 -----g~f~~~~~~-~~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~-~~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 303 -----GNFLLVRFD-DAEAAFQALLAAGVVVRDQRAAPRLSDALRITL-GTPEQNDRVLAALQRTQ 361 (364)
T ss_pred -----CcEEEEEcC-CHHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeC-CCHHHHHHHHHHHHHHH
Confidence 449999997 456778888999999999998865578999999 46778899999988764
No 78
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4e-40 Score=326.68 Aligned_cols=310 Identities=21% Similarity=0.250 Sum_probs=242.2
Q ss_pred CeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHH
Q 012785 95 RIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQ 174 (456)
Q Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~ 174 (456)
..++|+.|+|++++|+.+.+... ..+... ....|++..+ ++||+++|++++. ++++|++|+|+++
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~-~~~~~~--~~~~y~~~~~------~~lr~~ia~~~~~------~~~~i~it~G~~~ 87 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQ-EIVKSS--QVNIYPDPTA------EKLREELARYCSV------VPTNIFVGNGSDE 87 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHH-HHhhcC--cccCCCCccH------HHHHHHHHHHhCC------CcccEEEecCHHH
Confidence 45899999999887766554322 112111 2345776553 8999999999853 4679999999999
Q ss_pred HHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc------cccc----cCCCeEEEEcCCCCCCcc
Q 012785 175 LFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA------KRFN----KDGPYIELVTSPNNPDGS 244 (456)
Q Consensus 175 al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~------~~l~----~~~~~~i~v~~P~NPtG~ 244 (456)
++.+++.+++++|| +|++++|+|+.+...++..|++++.++.|. +.++ ..++++++++|||||||.
T Consensus 88 ~l~~~~~~l~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~ 163 (351)
T PRK14807 88 IIHLIMLAFINKGD----VVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGS 163 (351)
T ss_pred HHHHHHHHhcCCCC----EEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCC
Confidence 99999999999999 999999999999999999999998876653 2232 236789999999999999
Q ss_pred cchH-----HhhhcCcEEEeeecCCCCC---CCCCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhc
Q 012785 245 VRQS-----VVNRSGGILVHDLAYYWPQ---YTSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELN 316 (456)
Q Consensus 245 ~~~~-----l~~~~~~~iI~De~y~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~ 316 (456)
+++. ++++++.++|+||+|.+.. ..+.....+++|+++||||.+|+||+|+||++++ +++++.+...+.
T Consensus 164 ~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~-~~~~~~~~~~~~-- 240 (351)
T PRK14807 164 VIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVAN-ENILKYLNLVKS-- 240 (351)
T ss_pred CCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhcccchhceeeeecC-HHHHHHHHHccC--
Confidence 9983 6777788899999997531 1122234578999999999999999999999996 999999987654
Q ss_pred cCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCc
Q 012785 317 TIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPA 396 (456)
Q Consensus 317 ~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 396 (456)
.++++.++|.++..+|+ +.++++..+.++++|+.+.+.|++.+++.+. +.++ +
T Consensus 241 ~~~~~~~~q~~~~~~l~-------------~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~-------------~ 293 (351)
T PRK14807 241 PYNINSLSQVIALKVLR-------------TGVLKERVNYILNERERLIKELSKIPGIKVY-PSKT-------------N 293 (351)
T ss_pred CCCcCHHHHHHHHHHHh-------------HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cCCc-------------c
Confidence 46789999999999997 2356667778889999999999876555543 2333 3
Q ss_pred eEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 397 FAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 397 f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
|+|++++ +.+.+.+.|.++||.|+++..+...++++||+++ .+++.+.+++.|++++
T Consensus 294 ~~~i~~~-~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 294 FILVKFK-DADYVYQGLLERGILVRDFSKVEGLEGALRITVS-SCEANDYLINGLKELL 350 (351)
T ss_pred EEEEEcC-CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC-CHHHHHHHHHHHHHhh
Confidence 8999997 4567788888999999986543334789999995 5677889999888764
No 79
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-40 Score=331.61 Aligned_cols=312 Identities=20% Similarity=0.271 Sum_probs=242.9
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccC
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTG 171 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G 171 (456)
.+..+|+|+.|+|++.+++.+.+... . ... ....|++..| .+||+++|++++. ++++|++|+|
T Consensus 34 ~~~~~i~l~~~~~~~~~~~~~~~al~-~-~~~---~~~~Y~~~~g------~~lr~~ia~~~~~------~~~~i~~t~G 96 (371)
T PRK05166 34 GVPRIAKLGSNENPLGPSPAVRRAFA-D-IAE---LLRLYPDPQG------RALREAIAARTGV------PADRIILGNG 96 (371)
T ss_pred CCcceEEcCCCCCCCCCCHHHHHHHH-H-HHH---HhhcCCCCcH------HHHHHHHHHHhCc------CHHHEEEcCC
Confidence 35578999999988766654543321 1 111 2346998888 6999999999853 4679999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc------ccccc---CCCeEEEEcCCCCCC
Q 012785 172 STQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA------KRFNK---DGPYIELVTSPNNPD 242 (456)
Q Consensus 172 ~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~------~~l~~---~~~~~i~v~~P~NPt 242 (456)
+++++.+++.+++++|| +|+++.|+|+.+...++..|++++.++.|. +.++. .++++++++||||||
T Consensus 97 ~~~~l~~~~~~~~~~gd----~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPt 172 (371)
T PRK05166 97 SEDLIAVICRAVLRPGD----RVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVARAPRMLMFSNPSNPV 172 (371)
T ss_pred HHHHHHHHHHHhcCCCC----EEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhcCCCEEEEeCCCCCC
Confidence 99999999999999999 999999999999999999999998777653 33322 356899999999999
Q ss_pred cccchH-----Hhhh--cCcEEEeeecCCCCCC----CCC----CCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHH
Q 012785 243 GSVRQS-----VVNR--SGGILVHDLAYYWPQY----TSI----TYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAK 307 (456)
Q Consensus 243 G~~~~~-----l~~~--~~~~iI~De~y~~~~~----~~~----~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~ 307 (456)
|.+++. +++. .+++||+||+|.+..+ .+. ....+++|+++||||.||+||+|+||++++++++++
T Consensus 173 G~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~ 252 (371)
T PRK05166 173 GSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVG 252 (371)
T ss_pred CCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHH
Confidence 999983 4332 4889999999985321 111 122457999999999999999999998876688988
Q ss_pred HHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccc
Q 012785 308 KMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFL 387 (456)
Q Consensus 308 ~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~ 387 (456)
.+.+.+. .++++.++|.++.++|. + .+++++.++.++++|+.+.+.|++.+ +.+. |.+++
T Consensus 253 ~~~~~~~--~~~~~~~~q~~~~~~l~---~---------~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~-p~~g~---- 312 (371)
T PRK05166 253 LLDRVRT--PFNVNGAAQAAALAALD---D---------EEHLAKGVALALAERERLKKELAEMG-YRIA-PSRAN---- 312 (371)
T ss_pred HHHHhcc--CCCCCHHHHHHHHHHhc---C---------HHHHHHHHHHHHHHHHHHHHHHHHCc-CeeC-CCcCC----
Confidence 8877653 57789999988888886 2 46888889999999999999999874 4432 33444
Q ss_pred cccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 388 GRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 388 ~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
|+|++++.+...+.+.|.++||.++||..++. +++|||+++ ++++++.+++.|+.++
T Consensus 313 ---------fl~~~~~~~~~~l~~~l~~~gi~v~p~~~~~~-~~~iRi~~~-~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 313 ---------FLFFDARRPASAVAEALLRQGVIVKPWKQPGF-ETFIRVSIG-SPEENDHFVAALDKVL 369 (371)
T ss_pred ---------EEEEeCCCCHHHHHHHHHHCCeEEecCCCCCC-CCeEEEEcC-CHHHHHHHHHHHHHHh
Confidence 89999875667788888889999999987654 889999995 4556677777776654
No 80
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=8.3e-40 Score=307.53 Aligned_cols=323 Identities=18% Similarity=0.208 Sum_probs=269.5
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHH-HhcCccCCCceEEEccCH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHK-VVGNAITENHHIVVGTGS 172 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~I~~t~G~ 172 (456)
.++++|.+.|.+|+.|+.+.++.. ..+..+ ...|+ .+ +.++-++|++|.. +++.... ++.|++++|.
T Consensus 25 ~DvlPmWVADMDf~~pp~i~~Al~-~rvdhG---vfGY~--~~-----~~~~~~ai~~w~~~r~~~~i~-~e~i~~~p~V 92 (388)
T COG1168 25 EDVLPMWVADMDFPTPPEIIEALR-ERVDHG---VFGYP--YG-----SDELYAAIAHWFKQRHQWEIK-PEWIVFVPGV 92 (388)
T ss_pred CCcceeeeecccCCCCHHHHHHHH-HHHhcC---CCCCC--CC-----CHHHHHHHHHHHHHhcCCCCC-cceEEEcCcc
Confidence 689999999999999988876533 222223 23466 33 4889999999995 5666665 5789999999
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEee---------eccCcccccc----CCCeEEEEcCCC
Q 012785 173 TQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYK---------WAGDAKRFNK----DGPYIELVTSPN 239 (456)
Q Consensus 173 ~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~---------~~~d~~~l~~----~~~~~i~v~~P~ 239 (456)
..++..++++|.++|| .|++..|.|+++....+..|.+++. |.+|.+.+++ .+.+++++||||
T Consensus 93 Vpgi~~~I~~~T~~gd----~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPH 168 (388)
T COG1168 93 VPGISLAIRALTKPGD----GVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPH 168 (388)
T ss_pred hHhHHHHHHHhCcCCC----eeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCC
Confidence 9999999999999999 9999999999999999999999874 4567777664 356899999999
Q ss_pred CCCcccchH--------HhhhcCcEEEeeecCCCCCC-----CCCC----CCCCCcEEEecCccccCCCCceEEEEEEeC
Q 012785 240 NPDGSVRQS--------VVNRSGGILVHDLAYYWPQY-----TSIT----YPADHDLMLFTVSKSTGHAGTRIGWALVKD 302 (456)
Q Consensus 240 NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~-----~~~~----~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~ 302 (456)
||||.++++ +|++||+.||+||++.+.-+ .++. ...++.|.+.|-||+|+++|+++++++++|
T Consensus 169 NP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n 248 (388)
T COG1168 169 NPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISN 248 (388)
T ss_pred CCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecC
Confidence 999999994 89999999999999986322 2221 235889999999999999999999999999
Q ss_pred HHHHHHHHHH-HhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCC
Q 012785 303 MEVAKKMTKY-IELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKS-GLFSVPELP 380 (456)
Q Consensus 303 ~~~~~~l~~~-~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~ 380 (456)
+++.+++.+. ......++|.++..+..++++ +| +.|++.+.+.++.+++++.+.|.+. |.+.+..|+
T Consensus 249 ~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~---~G--------~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~ 317 (388)
T COG1168 249 RELRAKFLKRLKRNGLHGPSALGIIATEAAYN---QG--------EPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQ 317 (388)
T ss_pred HHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH---hc--------hHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCC
Confidence 9886665544 445677889999999998888 55 7899999999999999999999875 789999999
Q ss_pred CcccccccccCCCCCceEEeecCc---cH-HHHHHHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 381 SQFCTFLGRAFEPQPAFAWLKCEQ---EI-EDCESFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 381 g~~~~~~~~~~~~~~~f~~~~~~~---~~-~~~~~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
|.| .+|++|.. +. +.-+.++.+.+|.+.+|..||. +.+++|++++++++.+++++++|+..+
T Consensus 318 gTY-------------L~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al 384 (388)
T COG1168 318 GTY-------------LAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRAL 384 (388)
T ss_pred Cce-------------eeeeeccccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCCCHHHHHHHHHHHHHHH
Confidence 988 69999964 43 4455567789999999999996 679999999999999999999999876
Q ss_pred C
Q 012785 456 S 456 (456)
Q Consensus 456 ~ 456 (456)
+
T Consensus 385 ~ 385 (388)
T COG1168 385 K 385 (388)
T ss_pred h
Confidence 4
No 81
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-40 Score=329.57 Aligned_cols=311 Identities=19% Similarity=0.251 Sum_probs=244.0
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGST 173 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~ 173 (456)
+++|+|+.|+|++++++.+.+... ..+... ...|++.. .++||++||++++. ++++|++|+|++
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~-~~~~~~---~~~y~~~~------~~~lr~aia~~~~~------~~~~I~it~G~~ 87 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIR-AALGDD---LRLYPDPN------ADALRQAIAAYYGL------DPEQVFVGNGSD 87 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHH-HHhhhh---hhcCCCCc------HHHHHHHHHHHhCC------CHHHEEEcCCHH
Confidence 578999999999876654443322 112222 34687764 38999999999863 568999999999
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC------ccccccCCCeEEEEcCCCCCCcccch
Q 012785 174 QLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD------AKRFNKDGPYIELVTSPNNPDGSVRQ 247 (456)
Q Consensus 174 ~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d------~~~l~~~~~~~i~v~~P~NPtG~~~~ 247 (456)
++|.+++++++++|| +|++++|+|+.|...++..|++++.++.| .+.++. ..++++++|||||||.+++
T Consensus 88 ~al~~~~~~l~~~gd----~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~-~~~~v~~~~P~NPtG~~~~ 162 (353)
T PRK05387 88 EVLAHAFLAFFNHDR----PLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR-PNGGIIFPNPNAPTGIALP 162 (353)
T ss_pred HHHHHHHHHhcCCCC----EEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh-cCCEEEEeCCCCCCCCCCC
Confidence 999999999999999 99999999999999999999998877654 333432 3578899999999999998
Q ss_pred H-----Hhhhc-CcEEEeeecCCCCCCC---CCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhh-cc
Q 012785 248 S-----VVNRS-GGILVHDLAYYWPQYT---SITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIEL-NT 317 (456)
Q Consensus 248 ~-----l~~~~-~~~iI~De~y~~~~~~---~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~-~~ 317 (456)
. +++.. ++++|+||+|.+.... ++....+++++++||||.||+||+|+||++++ ++++++++..... ..
T Consensus 163 ~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~-~~~~~~l~~~~~~~~~ 241 (353)
T PRK05387 163 LAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGH-PELIEALNRVKNSFNS 241 (353)
T ss_pred HHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecC-HHHHHHHHHhhccCCC
Confidence 3 66554 9999999999753211 22234578999999999999999999999996 9999999887643 25
Q ss_pred CcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCce
Q 012785 318 IGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAF 397 (456)
Q Consensus 318 ~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f 397 (456)
++++.+.|.++.++|. + .+++++.+++++++++.+.+.|++.+ +.+. |.+++ |
T Consensus 242 ~~~~~~~q~~~~~~l~---~---------~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~-~~~~~-------------~ 294 (353)
T PRK05387 242 YPLDRLAQAGAIAAIE---D---------EAYFEETRAKVIATRERLVEELEALG-FEVL-PSKAN-------------F 294 (353)
T ss_pred CCcCHHHHHHHHHHhc---C---------HHHHHHHHHHHHHHHHHHHHHHHHCC-CeEC-CCcCc-------------E
Confidence 6789999999998886 2 45778889999999999999999874 4432 33444 8
Q ss_pred EEeecCc-cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 398 AWLKCEQ-EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 398 ~~~~~~~-~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
+|++++. +.+.+.+.|.++||.+++.... ..++++||+++ +++++++++++|++++
T Consensus 295 ~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~-~~~~~iRis~~-~~~~~~~~~~~L~~~~ 351 (353)
T PRK05387 295 VFARHPSHDAAELAAKLRERGIIVRHFNKP-RIDQFLRITIG-TDEEMEALVDALKEIL 351 (353)
T ss_pred EEEECCCCCHHHHHHHHHHCCEEEEECCCC-CCCCeEEEEeC-CHHHHHHHHHHHHHHh
Confidence 9999864 5667778888999999863222 23679999995 6789999999999876
No 82
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2e-40 Score=334.89 Aligned_cols=322 Identities=16% Similarity=0.130 Sum_probs=236.1
Q ss_pred CCeEEecCCCC-CCCchhHhhhccccc--ccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhc-CccCCCceEE--
Q 012785 94 ERIINVDHGDP-TMYEKYWQKVGDKTT--IVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVG-NAITENHHIV-- 167 (456)
Q Consensus 94 ~~~i~l~~g~p-~~~~~~~~~~~~~~~--~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g-~~~~~~~~I~-- 167 (456)
+++|||+.|.| ++.++....+..... .+... .....|+++.| .++||+++++|+...+ .... +++|+
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~~Y~~~~G-----~~~lR~aia~~~~~~~~~~~~-~~~v~~~ 101 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEK-NLDKEYLPIEG-----LQSFIEAAQKLLFGEASYALA-EKRIATV 101 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhccc-cCCCCCCCCCC-----CHHHHHHHHHHhcCCCccccc-cCeEEEe
Confidence 57899999986 344332221111100 01111 12357999999 5999999999985433 3333 56888
Q ss_pred EccCHHHHHHHHHH---HhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc--------Ccccccc------CCC
Q 012785 168 VGTGSTQLFQAALY---ALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG--------DAKRFNK------DGP 230 (456)
Q Consensus 168 ~t~G~~~al~~~~~---~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~--------d~~~l~~------~~~ 230 (456)
.|.|+++++.+++. +++++|| +|++++|+|+.|...++..|++++.+++ |.+.++. .++
T Consensus 102 ~t~G~~~al~~~~~~l~~~~~~Gd----~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~ 177 (404)
T PTZ00376 102 QALSGTGALRLGFEFLKRFLPAGT----TVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGS 177 (404)
T ss_pred eccCcchHHHHHHHHHHHhcCCCC----EEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCC
Confidence 59999999988875 6678999 9999999999999999999999988876 2222221 134
Q ss_pred eEEEEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCCCC-------C---CCCCCCcEEEecCccccCCCC
Q 012785 231 YIELVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQYTS-------I---TYPADHDLMLFTVSKSTGHAG 292 (456)
Q Consensus 231 ~~i~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~~~-------~---~~~~~~~i~i~S~SK~~g~~G 292 (456)
++++++|||||||.++++ +|++++++||+||+|.+..+.. + ....+++|+++||||+|++||
T Consensus 178 ~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~G 257 (404)
T PTZ00376 178 VVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYG 257 (404)
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccc
Confidence 678889999999999993 6889999999999998643321 1 123458999999999999999
Q ss_pred ceEEEEE--EeCHHHHHHH----HHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 012785 293 TRIGWAL--VKDMEVAKKM----TKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRM 366 (456)
Q Consensus 293 ~RiG~l~--~~~~~~~~~l----~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 366 (456)
+|+||++ +.++++++.+ .+.......+++.+.|.++..+|+ ++... ..+.+++++.++.++++|+.+.+
T Consensus 258 lRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~--~~~~~~~~~~~~~~~~~r~~l~~ 332 (404)
T PTZ00376 258 ERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILS---DPELR--AEWLSELKEMSGRIQNMRQLLYD 332 (404)
T ss_pred cccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhC---CHHHH--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999984 2247655544 333333345568899999999997 22000 00124467778899999999999
Q ss_pred HHHhcC---CccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEec-CChh
Q 012785 367 AVQKSG---LFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISML-DRDE 442 (456)
Q Consensus 367 ~L~~~~---~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~-~~~e 442 (456)
.|++.+ .+.+..|+||| |+|++++ .+.+..+++++||.+.|| + ||+++ .+++
T Consensus 333 ~L~~~~~~~~~~~~~p~gg~-------------f~~~~~~--~~~~~~L~~~~~v~v~p~-------~--Ris~~~~~~~ 388 (404)
T PTZ00376 333 ELKALGSPGDWEHIINQIGM-------------FSFTGLT--KEQVERLIEKYHIYLLDN-------G--RISVAGLTSK 388 (404)
T ss_pred HHHhcCCCCcccccccCceE-------------EEecCCC--HHHHHHHHHhCCEeecCC-------C--eEEEeccCHH
Confidence 999874 24455778888 9999984 566777777889999996 1 99997 4999
Q ss_pred HHHHHHHHHHhhh
Q 012785 443 NYNLFVQRLSKIL 455 (456)
Q Consensus 443 ~i~~~l~~L~~~l 455 (456)
+++.++++|++++
T Consensus 389 ~~~~~~~~l~~~~ 401 (404)
T PTZ00376 389 NVDYVAEAIHDVV 401 (404)
T ss_pred hHHHHHHHHHHHH
Confidence 9999999999886
No 83
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-39 Score=327.20 Aligned_cols=321 Identities=20% Similarity=0.267 Sum_probs=249.5
Q ss_pred CCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccC
Q 012785 93 GERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTG 171 (456)
Q Consensus 93 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G 171 (456)
.+.++||+.|+|++++++.+.+... ............|++..| .++||++++++++. ++... ++++|++|+|
T Consensus 32 ~~~~~~l~~g~p~~~~~~~v~~a~~-~~~~~~~~~~~~y~~~~g-----~~~lr~~ia~~l~~~~~~~~-~~~~i~~t~G 104 (394)
T PRK06836 32 ADNVFDFSLGNPSVPPPAAVKEALR-ELAEEEDPGLHGYMPNAG-----YPEVREAIAESLNRRFGTPL-TADHIVMTCG 104 (394)
T ss_pred CCCeEEecCcCCCCCCCHHHHHHHH-HHHhcCCcCcccCCCCCC-----CHHHHHHHHHHHHHHhCCCC-CcCcEEEeCC
Confidence 3568999999998776655554322 112211111346877788 59999999999965 45544 4679999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc-------cccc---CCCeEEEEcCCCCC
Q 012785 172 STQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK-------RFNK---DGPYIELVTSPNNP 241 (456)
Q Consensus 172 ~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-------~l~~---~~~~~i~v~~P~NP 241 (456)
++++++.++.+++.+|| +|++++|+|+.+...++..|++++.++.|.+ .+++ .+++++++++||||
T Consensus 105 ~~~al~~~~~~l~~~gd----~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NP 180 (394)
T PRK06836 105 AAGALNVALKAILNPGD----EVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITPKTKAVIINSPNNP 180 (394)
T ss_pred hHHHHHHHHHHhcCCCC----EEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCcCceEEEEeCCCCC
Confidence 99999999999999999 9999999999999999999999988876544 2222 36789999999999
Q ss_pred CcccchH--------Hhhh------cCcEEEeeecCCCCCCC-----CCCCCCCCcEEEecCccccCCCCceEEEEEEeC
Q 012785 242 DGSVRQS--------VVNR------SGGILVHDLAYYWPQYT-----SITYPADHDLMLFTVSKSTGHAGTRIGWALVKD 302 (456)
Q Consensus 242 tG~~~~~--------l~~~------~~~~iI~De~y~~~~~~-----~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~ 302 (456)
||.+++. +|++ ++++||+||+|.+..+. .+....+++++++||||.||+||+|+||++++
T Consensus 181 tG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~- 259 (394)
T PRK06836 181 TGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVN- 259 (394)
T ss_pred CCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecC-
Confidence 9999882 6777 89999999999864321 22234578999999999999999999999997
Q ss_pred HHHHHH------HHHHHhh-ccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 012785 303 MEVAKK------MTKYIEL-NTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFS 375 (456)
Q Consensus 303 ~~~~~~------l~~~~~~-~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 375 (456)
+++.+. +...... ...+++.+.|.++..++. +. ..++.++++++.+.+.|++++ +.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~-------------~~~~~~~~~r~~l~~~L~~~g-~~ 322 (394)
T PRK06836 260 PEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLD---AT-------------VDVSIYKRNRDLLYDGLTELG-FE 322 (394)
T ss_pred HHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhC---Ch-------------HHHHHHHHHHHHHHHHHHhCC-CE
Confidence 665332 1111111 124688899999999887 21 125678899999999999875 67
Q ss_pred ccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhh
Q 012785 376 VPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKI 454 (456)
Q Consensus 376 ~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~ 454 (456)
+..|.|++ |+|++++. +...+.+.|+++||.++||..|+. .+++||+++.+++++++++++|+++
T Consensus 323 ~~~~~gg~-------------~~~~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~-~~~iRi~~~~~~~~~~~~i~~l~~~ 388 (394)
T PRK06836 323 CVKPQGAF-------------YLFPKSPEEDDVAFCEKAKKHNLLLVPGSGFGC-PGYFRLSYCVDTETIERSLPAFEKL 388 (394)
T ss_pred eecCCceE-------------EEEEeCCCCCHHHHHHHHHhCCEEEECchhcCC-CCeEEEEecCCHHHHHHHHHHHHHH
Confidence 77777887 89998864 556677888999999999999975 6899999988999999999999988
Q ss_pred hC
Q 012785 455 LS 456 (456)
Q Consensus 455 l~ 456 (456)
++
T Consensus 389 l~ 390 (394)
T PRK06836 389 AK 390 (394)
T ss_pred HH
Confidence 63
No 84
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.3e-40 Score=327.35 Aligned_cols=312 Identities=18% Similarity=0.171 Sum_probs=247.8
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGST 173 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~ 173 (456)
.++|+|+.|+|++++++.+.+.... .+... ....|++. | .++||+++|+|++. .++++|++|+|++
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~Y~~~-~-----~~~lr~~ia~~~~~-----~~~~~I~~t~G~~ 91 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGE-RLAEV--ALNRYPDP-R-----AAALKAALRAAMGV-----PAGADVLLGNGSD 91 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHH-Hhhcc--ccccCCCC-C-----HHHHHHHHHHHhCc-----CCCCcEEEcCCHH
Confidence 5789999999999888776654221 12111 13468874 5 49999999999963 1235899999999
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc------cccc----cCCCeEEEEcCCCCCCc
Q 012785 174 QLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA------KRFN----KDGPYIELVTSPNNPDG 243 (456)
Q Consensus 174 ~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~------~~l~----~~~~~~i~v~~P~NPtG 243 (456)
+++.+++++++.+|| +|++++|+|+.+...++..|++++.+++|. +.++ ..++++++++|||||||
T Consensus 92 ~~i~~~~~~~~~~gd----~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG 167 (356)
T PRK04870 92 ELIQLLALACAKPGA----TVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTG 167 (356)
T ss_pred HHHHHHHHHhcCCCC----EEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCC
Confidence 999999999999999 999999999999999999999999877653 2332 23678999999999999
Q ss_pred ccchH-----HhhhcCcEEEeeecCCCCCCCC---CCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhh
Q 012785 244 SVRQS-----VVNRSGGILVHDLAYYWPQYTS---ITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIEL 315 (456)
Q Consensus 244 ~~~~~-----l~~~~~~~iI~De~y~~~~~~~---~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~ 315 (456)
.+++. +++..+.++|+||+|.+....+ .....+++++++|||| +++||+|+||++++ +++++++...+.
T Consensus 168 ~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~-~~~i~~~~~~~~- 244 (356)
T PRK04870 168 NLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGH-PAWIAELDKVRP- 244 (356)
T ss_pred CCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCC-HHHHHHHHHccC-
Confidence 99983 5554588999999998532211 1134468999999999 89999999999997 899999888763
Q ss_pred ccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCC
Q 012785 316 NTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQP 395 (456)
Q Consensus 316 ~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~ 395 (456)
.++++.+.|.++..+++ + .+++++.++.++++++.+.+.|++++++.+. +.+++
T Consensus 245 -~~~~~~~~q~~a~~~l~---~---------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~------------ 298 (356)
T PRK04870 245 -PYNVNVLTQATALFALE---H---------VDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAAN------------ 298 (356)
T ss_pred -CCcCCHHHHHHHHHHHh---C---------HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCe------------
Confidence 56789999999888886 2 3467888899999999999999987555443 33333
Q ss_pred ceEEeecCccHHHHHHHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 396 AFAWLKCEQEIEDCESFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 396 ~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
|+|++++ +.+.+.+.|+++||.|+||..|+. .++++||+++ +++++++++++|++++
T Consensus 299 -~~~~~~~-~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 299 -FILVRVP-DAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG-TPEENAQFLAALKAAL 356 (356)
T ss_pred -EEEEECC-CHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC-CHHHHHHHHHHHHHhC
Confidence 8999997 456677889999999999999963 5789999995 6788899999998875
No 85
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.4e-40 Score=326.76 Aligned_cols=307 Identities=18% Similarity=0.239 Sum_probs=244.0
Q ss_pred CeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHH
Q 012785 95 RIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQ 174 (456)
Q Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~ 174 (456)
..++|+.|+|++++++.+.+... +.......|+++. .++||++||++++. ++++|++|+|+++
T Consensus 33 ~~~~l~~~~~~~~~~~~~~~a~~-----~~~~~~~~Y~~~~------~~~Lr~~ia~~~~~------~~~~I~it~G~~~ 95 (369)
T PRK08153 33 FRARIGANESGFGPSPSVIAAMR-----EAAAEIWKYGDPE------NHDLRHALAAHHGV------APENIMVGEGIDG 95 (369)
T ss_pred ceeEecCCCCCCCCCHHHHHHHH-----HHHHHhhcCCCCc------cHHHHHHHHHHhCC------CHHHEEEcCCHHH
Confidence 45799999999988877665422 1111234588765 39999999999853 4679999999999
Q ss_pred HHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc-----ccc----cCCCeEEEEcCCCCCCccc
Q 012785 175 LFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK-----RFN----KDGPYIELVTSPNNPDGSV 245 (456)
Q Consensus 175 al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-----~l~----~~~~~~i~v~~P~NPtG~~ 245 (456)
++.+++.+++++|| .|++++|+|+.+...++..|.+++.++.|.+ .+. ..++++++++|||||||.+
T Consensus 96 ~l~~~~~~~~~~gd----~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~ 171 (369)
T PRK08153 96 LLGLIVRLYVEPGD----PVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDREDLDALLDAARRENAPLVYLANPDNPMGSW 171 (369)
T ss_pred HHHHHHHHhcCCCC----EEEECCCcchHHHHHHHHcCCeEEEeeCCCCCCCHHHHHHHhcccCCcEEEEeCCCCCCCCC
Confidence 99999999999999 9999999999999999999999988776533 221 2357899999999999999
Q ss_pred chH-----Hhhh--cCcEEEeeecCCCCCC----CCCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHh
Q 012785 246 RQS-----VVNR--SGGILVHDLAYYWPQY----TSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIE 314 (456)
Q Consensus 246 ~~~-----l~~~--~~~~iI~De~y~~~~~----~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~ 314 (456)
++. +++. ++++||+||+|.+..+ .++....+++|+++||||.||+||+|+||++++ +++++.+.+.+.
T Consensus 172 ~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~-~~~~~~l~~~~~ 250 (369)
T PRK08153 172 HPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGA-PGTIKAFDKVRN 250 (369)
T ss_pred CCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecC-HHHHHHHHHhhc
Confidence 984 4432 4899999999986432 222233568999999999999999999999997 899999988764
Q ss_pred hccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCC
Q 012785 315 LNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQ 394 (456)
Q Consensus 315 ~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~ 394 (456)
.++++++.|.++.++|+ + .+++++.++.++++++.+.+.|++.+ +... |.+++
T Consensus 251 --~~~~s~~~q~~~~~~l~---~---------~~~~~~~~~~~~~~r~~~~~~L~~~g-~~~~-p~~~~----------- 303 (369)
T PRK08153 251 --HFGMNRIAQAAALAALK---D---------QAYLAEVVGKIAAARDRIAAIARANG-LTPL-PSATN----------- 303 (369)
T ss_pred --CCCCCHHHHHHHHHHhc---C---------HHHHHHHHHHHHHHHHHHHHHHHHCC-CccC-CCcCc-----------
Confidence 57899999999999996 2 46788899999999999999998765 3322 34444
Q ss_pred CceEEeecCc---cHHHHHHHHHhCCEEee-cCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 395 PAFAWLKCEQ---EIEDCESFLKGNKILTR-SGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 395 ~~f~~~~~~~---~~~~~~~~l~~~gI~v~-pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
|+|++++. ....+.+.|.++||.++ ||... .++++||+++ ++++++.+++.|++++
T Consensus 304 --f~~~~~~~~~~~a~~l~~~l~~~Gi~v~~p~~~~--~~~~iRis~~-~~~~~~~~~~al~~~~ 363 (369)
T PRK08153 304 --FVAIDCGRDGAFARAVLDGLIARDIFVRMPGVAP--LDRCIRVSCG-PDEELDLFAEALPEAL 363 (369)
T ss_pred --EEEEECCCCcccHHHHHHHHHHCCeEEeeCCCCC--CCCeEEEecC-CHHHHHHHHHHHHHHH
Confidence 89998852 35677777888999995 65422 3579999995 7889999999999876
No 86
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.3e-39 Score=320.88 Aligned_cols=297 Identities=18% Similarity=0.201 Sum_probs=234.8
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGST 173 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~ 173 (456)
..+|+|+.+++++++++.... .. ....|++.. .+||++||++++. .++++|++|+|++
T Consensus 24 ~~~i~ls~Nenp~~~~~~~~~-------~~---~~~~Yp~~~-------~~L~~~ia~~~~~-----~~~~~I~i~~Gs~ 81 (339)
T PRK06959 24 DAWLDLSTGINPHGYPVPPVP-------AD---AWRRLPEDD-------DGLAACAARYYGA-----PDAAHVLPVAGSQ 81 (339)
T ss_pred hhhceeccCCCCCCCCCCCCC-------HH---HHHhCCCch-------HHHHHHHHHHhCC-----CCcccEEECcCHH
Confidence 467999999988765521110 01 134688653 7999999999975 1347999999999
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCccccccCCCeEEEEcCCCCCCcccchH-----
Q 012785 174 QLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKRFNKDGPYIELVTSPNNPDGSVRQS----- 248 (456)
Q Consensus 174 ~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~i~v~~P~NPtG~~~~~----- 248 (456)
++|.++.. ++++| .|++++|+|+.|...++..|++++.++.|.+.+. ...++++++|||||||.+++.
T Consensus 82 e~i~~l~~-~~~~g-----~v~v~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~-~~~~~v~l~nPnNPTG~~~s~~~l~~ 154 (339)
T PRK06959 82 AAIRALPA-LLPRG-----RVGIAPLAYSEYAPAFARHGHRVVPLDEAADTLP-AALTHLIVVNPNNPTAERLPAARLLR 154 (339)
T ss_pred HHHHHHHH-hcCCC-----eEEEcCCCcHHHHHHHHHCCCEEEeecccchhcc-ccCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 99997765 56665 5889999999999999999999999888764443 245789999999999999983
Q ss_pred H---hhhcCcEEEeeecCCCCCC-CCCCC--CCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCCh
Q 012785 249 V---VNRSGGILVHDLAYYWPQY-TSITY--PADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSK 322 (456)
Q Consensus 249 l---~~~~~~~iI~De~y~~~~~-~~~~~--~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~ 322 (456)
+ |++++.++|+||+|.+... .++.. ..+++|+++||||.||+||+|+||++++ +++++.+.+... .++++.
T Consensus 155 l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~-~~li~~l~~~~~--~~~vs~ 231 (339)
T PRK06959 155 WHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAA-PALLAALRDALG--AWTVSG 231 (339)
T ss_pred HHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcchheEEEecC-HHHHHHHHHhcC--CCCCcH
Confidence 3 4567899999999997432 22221 2467999999999999999999999997 999999998864 677899
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeec
Q 012785 323 DSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKC 402 (456)
Q Consensus 323 ~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~ 402 (456)
++|.++.++|+ + .++.++.++.++++|+.+.+.|++++ +.+. .++ +|+|+++
T Consensus 232 ~~q~a~~~~L~---~---------~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~--~~~-------------~f~~~~~ 283 (339)
T PRK06959 232 PARHAVRAAFA---D---------AAWQAAMRERLAADGARLAALLRAHG-FAVH--ATP-------------LFSWTDD 283 (339)
T ss_pred HHHHHHHHHhC---c---------HHHHHHHHHHHHHHHHHHHHHHHHCC-CCcc--Ccc-------------eEEEEeC
Confidence 99999999997 2 46788899999999999999999874 3332 123 3899998
Q ss_pred CccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 403 EQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 403 ~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
+ +...+.+.|.++||.|++ |+. .+++||++..++++++.+++.|++++
T Consensus 284 ~-~~~~l~~~l~~~GI~vr~---~~~-~~~lRisi~~~~~e~~~l~~al~~~~ 331 (339)
T PRK06959 284 P-RAAALHAALARRGIWTRY---FAP-PPSVRFGLPADEAEWQRLEDALAECV 331 (339)
T ss_pred C-CHHHHHHHHHhCCeEEEE---CCC-CCeEEEECCCCHHHHHHHHHHHHHHH
Confidence 6 456788889999999985 443 56999999668889999999988765
No 87
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=1.4e-39 Score=324.55 Aligned_cols=308 Identities=16% Similarity=0.226 Sum_probs=241.6
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGST 173 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~ 173 (456)
++.++|+.|+|++++++.+.+.... .+. . ...|++.. .++||++|+++++. ++++|++|+|++
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~-~~~-~---~~~Y~~~~------~~~Lr~aia~~~~v------~~e~I~it~Gs~ 105 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAAR-SAA-L---SGRYDLEL------EDDLRTLFAAQEGL------PADHVMAYAGSS 105 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHH-HHH-H---hcCCCCch------HHHHHHHHHHHhCc------ChhhEEEcCChH
Confidence 5679999999998877766553221 111 1 23577654 49999999998853 467999999999
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC------cccccc--CCCeEEEEcCCCCCCccc
Q 012785 174 QLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD------AKRFNK--DGPYIELVTSPNNPDGSV 245 (456)
Q Consensus 174 ~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d------~~~l~~--~~~~~i~v~~P~NPtG~~ 245 (456)
+++.+++.+++++|| +|++++|+|+.|...++..|.+++.++.+ .+.++. .++++++++|||||||.+
T Consensus 106 ~ai~~~~~~l~~~gd----~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~v~l~nP~NPTG~~ 181 (370)
T PRK09105 106 EPLNYAVLAFTSPTA----GLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAADPNAGLIYICNPNNPTGTV 181 (370)
T ss_pred HHHHHHHHHHcCCCC----EEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhcCCCCCEEEEeCCCCCCCcC
Confidence 999999999999999 99999999999999999999999877654 233332 356899999999999999
Q ss_pred chH-----Hhh--hcCcEEEeeecCCCCCCC-C---CCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHh
Q 012785 246 RQS-----VVN--RSGGILVHDLAYYWPQYT-S---ITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIE 314 (456)
Q Consensus 246 ~~~-----l~~--~~~~~iI~De~y~~~~~~-~---~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~ 314 (456)
++. +++ ++++++|+||+|.+.... + +....+++++++||||.||++|+|+||++++ +++++.+...
T Consensus 182 ~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~-~~~i~~l~~~-- 258 (370)
T PRK09105 182 TPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAAR-PDLLAKLARF-- 258 (370)
T ss_pred cCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecC-HHHHHHHHhc--
Confidence 983 433 358999999999642211 1 1134578999999999999999999999996 8999988776
Q ss_pred hccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCC
Q 012785 315 LNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQ 394 (456)
Q Consensus 315 ~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~ 394 (456)
....++.+.|.++.+.|. + +++++..++.++++++.+.+.|++.+ +.+.++.|+
T Consensus 259 -~~~~~~~~~~~aa~~~L~---~---------~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~~~------------ 312 (370)
T PRK09105 259 -GHNPLPVPAAAAGLASLR---D---------PKLVPQRRAENAAVREDTIAWLKKKG-YKCTPSQAN------------ 312 (370)
T ss_pred -CCCCcCHHHHHHHHHHHh---C---------HHHHHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCCc------------
Confidence 245588889999888886 2 56888999999999999999999874 555555554
Q ss_pred CceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 395 PAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 395 ~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
|+|++++.+...+.+.|.++||.+ |..|+..++++||+++ ++++++++++.|+++++
T Consensus 313 --f~~~~~~~~~~~l~~~L~~~gI~v--~~~~~~~~~~~Ris~~-~~~~~~~l~~al~~~~~ 369 (370)
T PRK09105 313 --CFMVDVKRPAKAVADAMAKQGVFI--GRSWPIWPNWVRVTVG-SEEEMAAFRSAFAKVMR 369 (370)
T ss_pred --EEEEeCCCCHHHHHHHHHHCCcEE--ecCCCCCCCeEEEEcC-CHHHHHHHHHHHHHHhh
Confidence 456787655667777788889998 4456545789999995 67788999999988753
No 88
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-40 Score=326.80 Aligned_cols=303 Identities=17% Similarity=0.192 Sum_probs=239.9
Q ss_pred CeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHH
Q 012785 95 RIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQ 174 (456)
Q Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~ 174 (456)
..++|+.+++++++++.+. .. ..+.|++... .+|+++++++++. ++++|++|+|+++
T Consensus 29 ~~~~l~~Nenp~~~~~~~~--------~~---~~~~Yp~~~~------~~l~~~~a~~~g~------~~~~I~~~~Gs~e 85 (351)
T PRK01688 29 GDVWLNANEYPTAVEFQLT--------QQ---TLNRYPECQP------KAVIENYAAYAGV------KPEQVLVSRGADE 85 (351)
T ss_pred CceEecCCCCCCCCChhhc--------cc---ccccCCCCCh------HHHHHHHHHHhCC------CHHHEEEcCCHHH
Confidence 4599999999888775321 11 1457988774 8999999999874 5689999999999
Q ss_pred HHHHHHHHhcCCC-CCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC------cccccc--CCCeEEEEcCCCCCCccc
Q 012785 175 LFQAALYALSSQD-ASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD------AKRFNK--DGPYIELVTSPNNPDGSV 245 (456)
Q Consensus 175 al~~~~~~l~~~g-d~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d------~~~l~~--~~~~~i~v~~P~NPtG~~ 245 (456)
++.+++++++++| | +|+++.|+|+.|...++..|++++.++.+ .+.++. .++++++++|||||||.+
T Consensus 86 ~i~~~~~~~~~~g~~----~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~~~~~lv~l~nPnNPTG~~ 161 (351)
T PRK01688 86 GIELLIRAFCEPGKD----AILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAIADNLDGVKVVYVCSPNNPTGNL 161 (351)
T ss_pred HHHHHHHHhcCCCCC----EEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHHhccCCcEEEEeCCCCCCCCC
Confidence 9999999999887 7 99999999999999999999999877654 333332 367899999999999999
Q ss_pred chH-----Hhhh--cCcEEEeeecCCCCCCC----CCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHh
Q 012785 246 RQS-----VVNR--SGGILVHDLAYYWPQYT----SITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIE 314 (456)
Q Consensus 246 ~~~-----l~~~--~~~~iI~De~y~~~~~~----~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~ 314 (456)
++. +++. .+.++|+||+|.+.... ......+++|+++||||.||++|+|+||++++ +++++.+.+...
T Consensus 162 ~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~-~~~i~~l~~~~~ 240 (351)
T PRK01688 162 INPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLAN-EEVINLLLKVIA 240 (351)
T ss_pred CCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCC-HHHHHHHHhccC
Confidence 983 4432 26889999999864321 11234578999999999999999999999996 999999987754
Q ss_pred hccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCC
Q 012785 315 LNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQ 394 (456)
Q Consensus 315 ~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~ 394 (456)
.++++.+.|.++.++|. +. ..+++++.++.++++|+.+.+.|++++++... +++.
T Consensus 241 --~~~v~~~~~~~a~~~L~---~~-------~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-------------~ps~ 295 (351)
T PRK01688 241 --PYPLSTPVADIAAQALS---PQ-------GIAAMRERVAEINANRQWLIAALKEIPCVEQV-------------FDSE 295 (351)
T ss_pred --CCCCCHHHHHHHHHHHh---cc-------hHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeE-------------CCCC
Confidence 67788899999888886 22 13678888889999999999999887544322 2445
Q ss_pred CceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHH
Q 012785 395 PAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLS 452 (456)
Q Consensus 395 ~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~ 452 (456)
++|+|++++ +.+.+.+.|.++||.|+++..|...++++||++ .++++++.+++.|+
T Consensus 296 ~nfi~~~~~-~~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~-~~~~e~~~l~~al~ 351 (351)
T PRK01688 296 TNYILARFT-ASSAVFKSLWDQGIILRDQNKQPGLSNCLRITI-GTREECQRVIDALR 351 (351)
T ss_pred CcEEEEEcC-CHHHHHHHHHHCCeEEEECCCcCCCCCeEEEeC-CCHHHHHHHHHhhC
Confidence 569999986 456777888899999998876633478999999 47789999988773
No 89
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=3.8e-39 Score=346.71 Aligned_cols=326 Identities=14% Similarity=0.171 Sum_probs=250.0
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEcc
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGT 170 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~ 170 (456)
.+.++|+|+.|+|++++|+.+.+... ..+... .+ ..| +++++++|++|+.. +|....++++|++|+
T Consensus 695 ~g~~vI~LsinE~d~ppPp~V~eAi~-eal~~~-----~~--s~g-----~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~ 761 (1082)
T PLN02672 695 QESSLIHMDVDESFLPVPSAVKASIF-ESFVRQ-----NI--SES-----ETDPRPSILQFIKSNYGFPTDSCTEFVYGD 761 (1082)
T ss_pred CCCCEEEEeCCCCCCCCCHHHHHHHH-HHHhhc-----CC--CCC-----ChHHHHHHHHHHHHHhCcCCCCCCEEEEeC
Confidence 45689999999999998876665422 111111 12 234 47899999999965 687776557999999
Q ss_pred CHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc-cc-------ccc---C-CCeEEEEcCC
Q 012785 171 GSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA-KR-------FNK---D-GPYIELVTSP 238 (456)
Q Consensus 171 G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~-~~-------l~~---~-~~~~i~v~~P 238 (456)
|+++++..++++++++|| +|++++|+|+.|...++..|++++.++++. ++ ++. . +.++++++||
T Consensus 762 Gs~elL~lll~aLl~pGD----~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nP 837 (1082)
T PLN02672 762 TSLALFNKLVLCCVQEGG----TLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGP 837 (1082)
T ss_pred CHHHHHHHHHHHHcCCCC----EEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECc
Confidence 999999999999999999 999999999999999999999999887653 22 222 1 2357889999
Q ss_pred C-CCCcccchH--------HhhhcCcEEEeeecCCCCCCCC-------CC----C--C---CCCcEEEecCccccCCCCc
Q 012785 239 N-NPDGSVRQS--------VVNRSGGILVHDLAYYWPQYTS-------IT----Y--P---ADHDLMLFTVSKSTGHAGT 293 (456)
Q Consensus 239 ~-NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~~~-------~~----~--~---~~~~i~i~S~SK~~g~~G~ 293 (456)
| ||||.++++ +|++++++||+||+|.+..|.. +. . . ..++|+++||||.|++||+
T Consensus 838 nhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGL 917 (1082)
T PLN02672 838 TINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGH 917 (1082)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHH
Confidence 7 999999993 6889999999999998532211 11 0 1 2379999999999999999
Q ss_pred eEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhC-CCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 012785 294 RIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSD-SCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSG 372 (456)
Q Consensus 294 RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~ 372 (456)
|+||++++++++++.+.+... ..+.....|.++.+++....+ .. .+.+++++.++.++++++++.+.|++.+
T Consensus 918 RIGylIap~~eLi~~l~~~~~--~s~~~~~~q~Aaaaalall~~~~~-----~~~~~l~e~r~~Lk~rRd~L~e~L~~~G 990 (1082)
T PLN02672 918 EFGFLALNDSVLIDAFHSAPG--LSRPHSTLKYTIKKLLGLKNQKSS-----DLLDGVAEQKKILKSRAERLKETLEACG 990 (1082)
T ss_pred HheeEEeCCHHHHHHHHHhhh--hcCCCcHHHHHHHHHHHHHhccCc-----HHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999975679999987643 233344566666665543211 11 2357788899999999999999999875
Q ss_pred CccccCCCCcccccccccCCCCCceEEeecC-------------------ccHHHHHH-HHHhCCEEeecCCCCCCCCCe
Q 012785 373 LFSVPELPSQFCTFLGRAFEPQPAFAWLKCE-------------------QEIEDCES-FLKGNKILTRSGKHFGFSPKY 432 (456)
Q Consensus 373 ~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~-------------------~~~~~~~~-~l~~~gI~v~pg~~fg~~~~~ 432 (456)
+.+.+|+|+| |+|++++ .+...+.+ ++++.||.+.||+.||. ++|
T Consensus 991 -i~v~~PeGGF-------------fLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~-~g~ 1055 (1082)
T PLN02672 991 -WDVLEPQGGI-------------SMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGI-PGY 1055 (1082)
T ss_pred -CeEecCCcEE-------------EEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCC-CCe
Confidence 6788889998 8998652 12344554 55567999999998875 789
Q ss_pred EEEEecCChhHHHHHHHHHHhhhC
Q 012785 433 VRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 433 iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
+||+++.+++++++++++|+++++
T Consensus 1056 ~RIsfa~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1056 CRFSFALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred EEEEecCCHHHHHHHHHHHHHHHH
Confidence 999998888999999999998753
No 90
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=4e-39 Score=316.69 Aligned_cols=293 Identities=17% Similarity=0.219 Sum_probs=228.9
Q ss_pred CeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHH
Q 012785 95 RIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQ 174 (456)
Q Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~ 174 (456)
.+|+|+.+++++++++... . ... ...|++. ..+||++|+++++ .++|++|+|+++
T Consensus 21 ~~i~l~~ne~p~~~~~~~~---~----~~~---~~~yp~~-------~~~Lr~~ia~~~~--------~~~I~it~Gs~~ 75 (330)
T PRK05664 21 DWLDLSTGIAPWPWPVPAI---P----ADA---WARLPET-------DDGLEAAARAYYG--------APQLLPVAGSQA 75 (330)
T ss_pred HheeecCCcCCCCCCCccc---C----HHH---HHhCCCC-------hHHHHHHHHHHhC--------CCCEEECcCHHH
Confidence 5799999976554332110 0 011 2357763 3899999999985 258999999999
Q ss_pred HHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcccccc--CCCeEEEEcCCCCCCcccchH----
Q 012785 175 LFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKRFNK--DGPYIELVTSPNNPDGSVRQS---- 248 (456)
Q Consensus 175 al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~--~~~~~i~v~~P~NPtG~~~~~---- 248 (456)
+|.+++. +.+|| +|++++|+|+.|...++..|++++.++.+. ++. .++++++++|||||||.+++.
T Consensus 76 al~~~~~--~~~gd----~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~~~v~l~nP~NPTG~~~s~~~l~ 147 (330)
T PRK05664 76 AIQALPR--LRAPG----RVGVLSPCYAEHAHAWRRAGHQVRELDEAE--VEAALDSLDVLVVVNPNNPTGRRFDPARLL 147 (330)
T ss_pred HHHHHHH--ccCCC----EEEEcCCChHHHHHHHHHcCCeEEEechhh--HhhhhcCCCEEEEeCCcCCCCCccCHHHHH
Confidence 9998863 57899 999999999999999999999999988752 222 356788999999999999993
Q ss_pred ----HhhhcCcEEEeeecCCCCCC-CCCC--CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCC
Q 012785 249 ----VVNRSGGILVHDLAYYWPQY-TSIT--YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVS 321 (456)
Q Consensus 249 ----l~~~~~~~iI~De~y~~~~~-~~~~--~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s 321 (456)
+|++++++||+||+|.+... .++. ...+++|+++||||+||+||+|+||++++ +++++.+.+... .++++
T Consensus 148 ~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~-~~l~~~~~~~~~--~~~~~ 224 (330)
T PRK05664 148 AWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAE-PALLRALAELLG--PWTVS 224 (330)
T ss_pred HHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCcceEEEEeC-HHHHHHHHHhcC--CCCCC
Confidence 46789999999999975321 2222 23468999999999999999999999997 999999988754 56788
Q ss_pred hHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEee
Q 012785 322 KDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLK 401 (456)
Q Consensus 322 ~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~ 401 (456)
.+.|.++.++|. + ..+.++.++.++++++.+.+.|++.+ + .+.|+. ++|+|++
T Consensus 225 ~~~~~~~~~~L~---~---------~~~~~~~~~~~~~~r~~l~~~L~~~~-~---~~~~~~-----------~~f~~~~ 277 (330)
T PRK05664 225 GPTRWLAQAALA---D---------TPWQRRQRERLLAASQRLAALLRRHG-L---TPAGGC-----------ALFQWVR 277 (330)
T ss_pred HHHHHHHHHHHh---C---------hHHHHHHHHHHHHHHHHHHHHHHHCC-C---cccCCc-----------ceEEEEe
Confidence 999999999987 2 34567889999999999999999874 2 233432 1389998
Q ss_pred cCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 402 CEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 402 ~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
++ +.+.+.+.|+++||.|++ |+ ..+++||+++.++++++++++.|+++.
T Consensus 278 ~~-~~~~~~~~l~~~gi~v~~---f~-~~~~iRis~~~~~~~~~~l~~al~~~~ 326 (330)
T PRK05664 278 TE-DAAALHEFLARRGILTRL---FE-QPASLRFGLPADEADWARLDQALLAYR 326 (330)
T ss_pred cC-CHHHHHHHHHHCCeEEEE---CC-CCCeEEEECCCCHHHHHHHHHHHHHHH
Confidence 86 566778889999999985 55 368999999756777888888887664
No 91
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.1e-39 Score=321.32 Aligned_cols=319 Identities=17% Similarity=0.219 Sum_probs=250.7
Q ss_pred CCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCH
Q 012785 93 GERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGS 172 (456)
Q Consensus 93 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~ 172 (456)
+..+|+|+.+++++++++.+.+... ..+..+. ...|+++.| .++||++++++++. ++++|++|+|+
T Consensus 27 ~~~~i~l~~~~~~~~~~~~~~~a~~-~~~~~~~--~~~y~~~~g-----~~~lr~~ia~~l~~------~~~~v~~~~g~ 92 (380)
T PRK06225 27 DKEMIWMGQNTNHLGPHEEVREAMI-RCIEEGE--YCKYPPPEG-----FPELRELILKDLGL------DDDEALITAGA 92 (380)
T ss_pred cCCeEEccCCCCCCCCCHHHHHHHH-HHHhcCC--CCCCCCCcc-----hHHHHHHHHHhcCC------CCCcEEEeCCH
Confidence 4678999999998876665554322 1222221 346888888 59999999999853 45799999999
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC---------cccccc---CCCeEEEEcCCCC
Q 012785 173 TQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD---------AKRFNK---DGPYIELVTSPNN 240 (456)
Q Consensus 173 ~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d---------~~~l~~---~~~~~i~v~~P~N 240 (456)
++++.+++++++.+|| +|++++|+|..+...++..|++++.++++ .+.++. .+++++++++|||
T Consensus 93 t~al~~~~~~~~~~gd----~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~N 168 (380)
T PRK06225 93 TESLYLVMRAFLSPGD----NAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLN 168 (380)
T ss_pred HHHHHHHHHHhcCCCC----EEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCC
Confidence 9999999999999999 99999999999999999999998877653 233332 3678998899999
Q ss_pred CCcccch--------HHhhhcCcEEEeeecCCCCC--CCCCC-CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHH
Q 012785 241 PDGSVRQ--------SVVNRSGGILVHDLAYYWPQ--YTSIT-YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKM 309 (456)
Q Consensus 241 PtG~~~~--------~l~~~~~~~iI~De~y~~~~--~~~~~-~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l 309 (456)
|||.+++ ++|+++|+++|+||+|.+.. ..+.. ...++++++.||||.+|++|+|+||++++ +++++.+
T Consensus 169 ptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~-~~l~~~~ 247 (380)
T PRK06225 169 PLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVAT-PDLIEVV 247 (380)
T ss_pred CCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecC-HHHHHHH
Confidence 9999987 26889999999999996421 11111 23478999999999999999999999996 8999998
Q ss_pred HHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccc-cCCCCccccccc
Q 012785 310 TKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSV-PELPSQFCTFLG 388 (456)
Q Consensus 310 ~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~g~~~~~~~ 388 (456)
+.... ...+.+.+.|.++...|.. . ++++++.++.++++++.+.+.|+++++..+ ..+.+
T Consensus 248 ~~~~~-~~~~~~~~~~~~a~~~l~~---~--------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~------- 308 (380)
T PRK06225 248 KSIVI-NDLGTNVIAQEAAIAGLKV---K--------DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSH------- 308 (380)
T ss_pred HHHHh-cccCCCHHHHHHHHHHHhc---c--------hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCC-------
Confidence 87643 4678899999999888872 2 467788888889999999999988643322 12233
Q ss_pred ccCCCCCceEEeecCc---cHHHHHHHHHhCCEEeecCCCCCC--CCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 389 RAFEPQPAFAWLKCEQ---EIEDCESFLKGNKILTRSGKHFGF--SPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 389 ~~~~~~~~f~~~~~~~---~~~~~~~~l~~~gI~v~pg~~fg~--~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
++|+|++++. +...+.+.|.++||.++||..|+. +++++|++++.++|++++++++|++++
T Consensus 309 ------g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~ 374 (380)
T PRK06225 309 ------GNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVV 374 (380)
T ss_pred ------CeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHH
Confidence 3388998853 566788888899999999987753 467999999888899999999999876
No 92
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=1.5e-39 Score=324.31 Aligned_cols=320 Identities=22% Similarity=0.311 Sum_probs=251.1
Q ss_pred CeEEecCCCCCCC----chhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHH-HhcCccCCCceEEEc
Q 012785 95 RIINVDHGDPTMY----EKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHK-VVGNAITENHHIVVG 169 (456)
Q Consensus 95 ~~i~l~~g~p~~~----~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~I~~t 169 (456)
.+|||+.|+++.. .++...++.. ... ........|+++.| .++||+++|+|++ ..|....++.+|++|
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~Y~~~~g-----~~~lr~~ia~~~~~~~~~~~~~~~~i~~~ 74 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAI-RGA-ATSSSFLGYPPPQG-----YPELREAIADFLGRRYGVPVDPEANILVT 74 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHH-HHH-HHHTGCTSSTCTTH-----HHHHHHHHHHHHHHHHTHHTTGGEGEEEE
T ss_pred CEEEEECCCCCCcccccchHHHHHHHH-HHh-hcccccccCCCchh-----hHHHHHHHHHHhhhccCcccccceEEEEe
Confidence 5899999999876 3222221111 100 11122357999999 5999999999997 566666543399999
Q ss_pred cCHHHHHHHHHHHh-cCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc--------Ccccccc---C------CCe
Q 012785 170 TGSTQLFQAALYAL-SSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG--------DAKRFNK---D------GPY 231 (456)
Q Consensus 170 ~G~~~al~~~~~~l-~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~--------d~~~l~~---~------~~~ 231 (456)
+|+++++..++..+ ..+|+ +|++++|+|+.+...++..|.+++.+++ |.+.++. + +++
T Consensus 75 ~G~~~~~~~~~~~~~~~~~~----~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 150 (363)
T PF00155_consen 75 SGAQAALFLLLRLLKINPGD----TVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPK 150 (363)
T ss_dssp SHHHHHHHHHHHHHHSSTTS----EEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEE
T ss_pred cccccchhhhhhcccccccc----cceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccc
Confidence 99999999999999 78999 9999999999999999999999998874 3444432 1 357
Q ss_pred EEEEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCCC-----C-CC--CCCCCcEEEecCccccCCCCceE
Q 012785 232 IELVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQYT-----S-IT--YPADHDLMLFTVSKSTGHAGTRI 295 (456)
Q Consensus 232 ~i~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~~-----~-~~--~~~~~~i~i~S~SK~~g~~G~Ri 295 (456)
++++++||||||.+++. +|++++++||+||+|.+..+. + .. ....++|+++||||.||++|+|+
T Consensus 151 ~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRv 230 (363)
T PF00155_consen 151 AVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRV 230 (363)
T ss_dssp EEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTE
T ss_pred eeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeecccccccccccc
Confidence 99999999999999983 589999999999999963322 1 11 33456999999999999999999
Q ss_pred EEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 012785 296 GWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFS 375 (456)
Q Consensus 296 G~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 375 (456)
||++++ +++++.++....... .+.+.|.++..++..... ..+++++.++.++++++.+.+.|++. ++.
T Consensus 231 G~i~~~-~~~~~~l~~~~~~~~--~~~~~~~~~~~~l~~~~~--------~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~ 298 (363)
T PF00155_consen 231 GYIVAP-PELIERLRRFQRSGL--SSSPMQAAAAAALSDPEL--------VEKWLEELRERLRENRDLLREALEEI-GIT 298 (363)
T ss_dssp EEEEEE-HHHHHHHHHHHHHTT--SSHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHT-TSE
T ss_pred ccccch-hhhhhhhhhcccccc--ccchhhHHHHHhhhcccc--------cccccccchhhHHHHHHHHHHHHHHh-hhh
Confidence 999996 999999998876433 388999999998884211 13488999999999999999999888 477
Q ss_pred ccCCCCcccccccccCCCCCceEEeecCcc-HHHHHHHHHhC-CEEeecCCCCCCCCCeEEEEec-CChhHHHHHHHHH
Q 012785 376 VPELPSQFCTFLGRAFEPQPAFAWLKCEQE-IEDCESFLKGN-KILTRSGKHFGFSPKYVRISML-DRDENYNLFVQRL 451 (456)
Q Consensus 376 ~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~-~~~~~~~l~~~-gI~v~pg~~fg~~~~~iRis~~-~~~e~i~~~l~~L 451 (456)
+..+++++ |+|+.++.. .+++.+.|.++ ||.+.||..|+. ++++||+++ .++|++++++++|
T Consensus 299 ~~~~~~~~-------------~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~-~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 299 VLPPEAGF-------------FLWVRLDPNDAEELAQELLEEYGILVRPGSYFGV-PGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp EEHHSBSS-------------EEEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTS-TTEEEEEGGCSCHHHHHHHHHHH
T ss_pred eeeccCcc-------------EEEEEcccchHHHHHHHHHHhCCEEEEecCCCCC-CCEEEEEeccCCHHHHHHHHhhC
Confidence 77777887 899998753 45555555555 999999999988 899999994 4999999999986
No 93
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-39 Score=321.88 Aligned_cols=315 Identities=17% Similarity=0.218 Sum_probs=245.4
Q ss_pred CeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccCHH
Q 012785 95 RIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTGST 173 (456)
Q Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G~~ 173 (456)
..|+|+.|+|++++++.+.+..... +.........|++. | .++||++||+|+.. +|..+. +++|++|+|++
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~-l~~~~~~~~~Y~~~-g-----~~~lr~aia~~~~~~~~~~~~-~~~I~it~G~~ 98 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEA-VAEAAAGLNRYPDR-D-----AVALRADLAAYLTAQTGVGLT-VENVWAANGSN 98 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHH-HhhhhhhhccCCCC-c-----hHHHHHHHHHHhhhhccCCCC-hhhEEECCCHH
Confidence 5699999999998887666542211 22111124568764 6 59999999999965 465554 57999999999
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc------Cccccc----cCCCeEEEEcCCCCCCc
Q 012785 174 QLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG------DAKRFN----KDGPYIELVTSPNNPDG 243 (456)
Q Consensus 174 ~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~------d~~~l~----~~~~~~i~v~~P~NPtG 243 (456)
+++.+++++++++|| .|+++.|+|+.|...++..|.+++.++. |.+.++ ..++++++++|||||||
T Consensus 99 ~~l~~~~~~~~~~gd----~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG 174 (368)
T PRK03317 99 EILQQLLQAFGGPGR----TALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTG 174 (368)
T ss_pred HHHHHHHHHhcCCCC----EEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCC
Confidence 999999999999999 9999999999999999999998886653 334443 23578899999999999
Q ss_pred ccchH-----HhhhcCcEEEeeecCCCCCCCCCC------CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHH
Q 012785 244 SVRQS-----VVNRSGGILVHDLAYYWPQYTSIT------YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKY 312 (456)
Q Consensus 244 ~~~~~-----l~~~~~~~iI~De~y~~~~~~~~~------~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~ 312 (456)
.+++. +++..++++|+||+|.+..+.+.. ...+++|+++||||.||++|+|+||++++ +++++.+...
T Consensus 175 ~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~-~~~~~~l~~~ 253 (368)
T PRK03317 175 TALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAA-PAVVDALRLV 253 (368)
T ss_pred CCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCC-HHHHHHHHhc
Confidence 99983 777788999999999864322211 22357999999999999999999999996 9999999876
Q ss_pred HhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCC
Q 012785 313 IELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFE 392 (456)
Q Consensus 313 ~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~ 392 (456)
. .++++|+++|.++.++|+. .+.+.+.++.++++++.+.+.|++.+ +.+..+.|++
T Consensus 254 ~--~~~~~s~~~~~a~~~~l~~------------~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~--------- 309 (368)
T PRK03317 254 R--LPYHLSAVTQAAARAALRH------------ADELLASVAALRAERDRVVAWLRELG-LRVAPSDANF--------- 309 (368)
T ss_pred C--CCCCCCHHHHHHHHHHhhC------------HHHHHHHHHHHHHHHHHHHHHHHHCC-CEeCCCCCcE---------
Confidence 5 3678999999999998872 22334455678899999999998875 5666666666
Q ss_pred CCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 393 PQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 393 ~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
|+|.+++ +...+.+.|.++||.++++ +. ++++||+++ ++++++.+++.|+++++
T Consensus 310 ----~~~~~~~-~~~~~~~~l~~~Gv~v~~~---~~-~~~iRi~~~-~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 310 ----VLFGRFA-DRHAVWQGLLDRGVLIRDV---GI-PGWLRVTIG-TPEENDAFLAALAEVLA 363 (368)
T ss_pred ----EEEeccC-CHHHHHHHHHHCCEEEEeC---CC-CCeEEEecC-CHHHHHHHHHHHHHHHH
Confidence 6776664 4566778888999999873 32 689999995 67789999999988763
No 94
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-39 Score=320.63 Aligned_cols=305 Identities=18% Similarity=0.250 Sum_probs=241.0
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGST 173 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~ 173 (456)
...++|+.+++++++++... .. ..+.|++.. .++||+++|++++. ++++|++|+|++
T Consensus 31 ~~~~~l~~ne~~~~~~~~~~--------~~---~~~~Yp~~~------~~~Lr~aia~~~~~------~~~~I~it~Gs~ 87 (354)
T PRK04635 31 RGDIWINANESPFNNEYKLD--------LA---RLNRYPECQ------PPELINAYSAYAGV------APEQILTSRGAD 87 (354)
T ss_pred CCcEEeeCCCCCCCCChhhh--------hH---HhccCCCCC------HHHHHHHHHHHhCc------CHHHEEEeCCHH
Confidence 45699999999988774220 11 135688875 49999999999864 568999999999
Q ss_pred HHHHHHHHHhcCCC-CCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc------cccc-CCCeEEEEcCCCCCCccc
Q 012785 174 QLFQAALYALSSQD-ASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK------RFNK-DGPYIELVTSPNNPDGSV 245 (456)
Q Consensus 174 ~al~~~~~~l~~~g-d~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~------~l~~-~~~~~i~v~~P~NPtG~~ 245 (456)
++|.+++++++.+| | +|++++|+|+.|...++..|++++.++++.+ .++. .++++++++|||||||.+
T Consensus 88 ~~i~~~~~~~~~~g~d----~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~~~~~li~i~nP~NPTG~~ 163 (354)
T PRK04635 88 EAIELLIRAFCEPGQD----SIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYIEQLDGAKLVFICNPNNPTGTV 163 (354)
T ss_pred HHHHHHHHHhcCCCCC----eEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHhccCCCEEEEeCCCCCCCcc
Confidence 99999999999988 7 9999999999999999999999988876532 2221 367899999999999999
Q ss_pred chH-----Hhhh-cCcEEEeeecCCCCCC----CCCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhh
Q 012785 246 RQS-----VVNR-SGGILVHDLAYYWPQY----TSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIEL 315 (456)
Q Consensus 246 ~~~-----l~~~-~~~~iI~De~y~~~~~----~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~ 315 (456)
++. +++. .+++||+||+|.+... ..+....+++|+++||||.||++|+|+||++++ +++++.+.....
T Consensus 164 ~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~-~~~~~~l~~~~~- 241 (354)
T PRK04635 164 IDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLAN-EELIEILMRVIA- 241 (354)
T ss_pred CCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCC-HHHHHHHHhhcC-
Confidence 983 5544 3699999999985321 112234578999999999999999999999996 999998876543
Q ss_pred ccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCC
Q 012785 316 NTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQP 395 (456)
Q Consensus 316 ~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~ 395 (456)
.++++.+.|.++.++|. +. ..+++++.++.++++|+.+.+.|++++.+.+.++ ++
T Consensus 242 -~~~~~~~~~~~a~~~l~---~~-------~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--------------~g 296 (354)
T PRK04635 242 -PYPVPLPVSEIATQALS---EA-------GLARMKFQVLDLNAQGARLQAALSMYGGAKVLEG--------------NG 296 (354)
T ss_pred -CCCCCHHHHHHHHHHHh---cc-------cHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCC--------------CC
Confidence 57788899999888886 22 1355777888899999999999998764444333 34
Q ss_pred ceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 396 AFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 396 ~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
+|+|++++ +.+.+.+.++++||.++++..++ .++++|||+ .++|+++.+++.|++..
T Consensus 297 ~f~~~~~~-~~~~~~~~l~~~gv~v~~~~~~~-~~~~lRis~-~~~e~~~~l~~al~~~~ 353 (354)
T PRK04635 297 NYVLAKFD-DVDAVFKALWDAGIVARAYKDPR-LANCIRFSF-SNRAETDKLIGLIRNQY 353 (354)
T ss_pred cEEEEECC-CHHHHHHHHHHCCEEEEECCCCC-CCCeEEEEe-CCHHHHHHHHHHHHHhc
Confidence 48999987 45667788899999999865433 367999999 57889999999998753
No 95
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.3e-38 Score=318.02 Aligned_cols=312 Identities=17% Similarity=0.238 Sum_probs=246.9
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccC
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTG 171 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G 171 (456)
.+..++||+.++|++.+++.+.+... .. .. ....|++..+ .+||+++|++++. ++++|++|+|
T Consensus 30 ~~~~~i~l~~~~~~~~~~~~~~~a~~-~~-~~---~~~~y~~~~~------~~lr~~ia~~~~~------~~~~i~~t~G 92 (367)
T PRK02731 30 GIADIIKLASNENPLGPSPKAIEAIR-AA-AD---ELHRYPDGSG------FELKAALAEKFGV------DPERIILGNG 92 (367)
T ss_pred CCCceEEecCCCCCCCCCHHHHHHHH-HH-HH---hhcCCCCCcH------HHHHHHHHHHhCc------CHHHEEEcCC
Confidence 45678999999887766655443321 11 11 2346887665 8999999999853 4579999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC-----cccccc---CCCeEEEEcCCCCCCc
Q 012785 172 STQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD-----AKRFNK---DGPYIELVTSPNNPDG 243 (456)
Q Consensus 172 ~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d-----~~~l~~---~~~~~i~v~~P~NPtG 243 (456)
+++++.+++.+++++|| +|++++|+|..+...++..|++++.++.+ .+.++. .++++++++|||||||
T Consensus 93 ~~~~l~~~~~~l~~~gd----~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG 168 (367)
T PRK02731 93 SDEILELLARAYLGPGD----EVIYSEHGFAVYPIAAQAVGAKPVEVPAKDYGHDLDAMLAAVTPRTRLVFIANPNNPTG 168 (367)
T ss_pred HHHHHHHHHHHhcCCCC----EEEEecCCHHHHHHHHHHcCCeEEEecccCCCCCHHHHHHHhCCCCcEEEEeCCCCCCC
Confidence 99999999999999999 99999999999999899999999877653 333332 3678999999999999
Q ss_pred ccchH-----Hhhh--cCcEEEeeecCCCCCC-----CCC--CCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHH
Q 012785 244 SVRQS-----VVNR--SGGILVHDLAYYWPQY-----TSI--TYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKM 309 (456)
Q Consensus 244 ~~~~~-----l~~~--~~~~iI~De~y~~~~~-----~~~--~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l 309 (456)
.+++. +++. +++++|+||+|.+..+ .++ ....+++|+++||||.||++|+|+||++++ +++++.+
T Consensus 169 ~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~-~~~~~~l 247 (367)
T PRK02731 169 TYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP-PEIIDAL 247 (367)
T ss_pred cCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC-HHHHHHH
Confidence 99983 5554 4899999999974222 111 123478999999999999999999999997 8999988
Q ss_pred HHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccc
Q 012785 310 TKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGR 389 (456)
Q Consensus 310 ~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~ 389 (456)
.+... .++.+.++|.++.++|+ + .+++++.++.++++++.+.+.|++.+ +.+. +.++.
T Consensus 248 ~~~~~--~~~~~~~~~~~a~~~l~---~---------~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~-~~~g~------ 305 (367)
T PRK02731 248 NRVRQ--PFNVNSLALAAAVAALD---D---------DAFVEKSRALNAEGMAWLTEFLAELG-LEYI-PSVGN------ 305 (367)
T ss_pred HHccC--CCCCCHHHHHHHHHHhC---C---------HHHHHHHHHHHHHHHHHHHHHHHHCC-CccC-CCCce------
Confidence 87754 56788999999999887 2 46788899999999999999999874 4443 22333
Q ss_pred cCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 390 AFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 390 ~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
|+|++++. +...+.+.|.++||.++++..|+ .++++||+++ +.++++.+++.|+++++
T Consensus 306 -------~~~i~~~~~~~~~~~~~~L~~~gI~v~~~~~~~-~~~~iRis~~-~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 306 -------FILVDFDDGKDAAEAYQALLKRGVIVRPVAGYG-LPNALRITIG-TEEENRRFLAALKEFLA 365 (367)
T ss_pred -------EEEEECCCCCCHHHHHHHHHHCCEEEEeCCCCC-CCCeEEEecC-CHHHHHHHHHHHHHHHh
Confidence 89999843 56778888889999999999887 3689999995 67889999999998764
No 96
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=4.9e-39 Score=320.47 Aligned_cols=309 Identities=17% Similarity=0.233 Sum_probs=243.8
Q ss_pred CCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEE-ccC
Q 012785 93 GERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVV-GTG 171 (456)
Q Consensus 93 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~-t~G 171 (456)
+..+|+|+.+++++.+++.+.+... ... .. ...|+++.+ ++||+++|++++. ++++|++ |+|
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~-~~~-~~---~~~y~~~~~------~~lr~~ia~~~~~------~~~~i~~~~~G 95 (361)
T PRK00950 33 PESIIKLGSNENPLGPSPKAVEAIE-KEL-SK---IHRYPEPDA------PELREALSKYTGV------PVENIIVGGDG 95 (361)
T ss_pred ccceEEccCCCCCCCCCHHHHHHHH-HHH-Hh---hcCCCCCCH------HHHHHHHHHHhCC------CHHHEEEeCCC
Confidence 4488999999988876665543321 111 11 235777664 8999999999864 4578998 899
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC------cccccc---CCCeEEEEcCCCCCC
Q 012785 172 STQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD------AKRFNK---DGPYIELVTSPNNPD 242 (456)
Q Consensus 172 ~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d------~~~l~~---~~~~~i~v~~P~NPt 242 (456)
+++++..+++++.++|| +|++++|+|+.+...++..|++++.++.+ .+.++. .+++++++++|||||
T Consensus 96 a~~~i~~~~~~~~~~gd----~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~npt 171 (361)
T PRK00950 96 MDEVIDTLMRTFIDPGD----EVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAITEKTKVIFLCTPNNPT 171 (361)
T ss_pred HHHHHHHHHHHhcCCCC----EEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhccCCCEEEEeCCCCCC
Confidence 99999999999999999 99999999999999999999998876543 333332 357889999999999
Q ss_pred cccch-----HHhhhcCcEEEeeecCCCCCC---CCCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHh
Q 012785 243 GSVRQ-----SVVNRSGGILVHDLAYYWPQY---TSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIE 314 (456)
Q Consensus 243 G~~~~-----~l~~~~~~~iI~De~y~~~~~---~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~ 314 (456)
|.+++ ++|+++++++|+||+|.+... .++....+++++++||||.+|+||+|+||++++ +++++.+++...
T Consensus 172 G~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~-~~~~~~~~~~~~ 250 (361)
T PRK00950 172 GNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVP-EWLIDYYMRAKT 250 (361)
T ss_pred CCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCC-HHHHHHHHHhcC
Confidence 99998 378899999999999985321 122234478999999999999999999999997 899998887764
Q ss_pred hccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCC
Q 012785 315 LNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQ 394 (456)
Q Consensus 315 ~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~ 394 (456)
.++.+.+.|.++..+|. + .+++++.++.++++++.+.+.|+ +.+. +.++
T Consensus 251 --~~~~~~~~~~~a~~~l~---~---------~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~~~------------ 299 (361)
T PRK00950 251 --PFSLTRLSQAAAIAALS---D---------KEYIEKSIEHGIKSREYLYNELP----FKVY-PSEA------------ 299 (361)
T ss_pred --CCCCCHHHHHHHHHHhc---C---------HHHHHHHHHHHHHHHHHHHhhcC----eeEC-CCcc------------
Confidence 46688999999888886 2 46788888889999988887775 2222 2333
Q ss_pred CceEEeecCc-cHHHHHHHHHhCCEEeecCCCCCC-CCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 395 PAFAWLKCEQ-EIEDCESFLKGNKILTRSGKHFGF-SPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 395 ~~f~~~~~~~-~~~~~~~~l~~~gI~v~pg~~fg~-~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
+|+|++++. +...+.+.|.++||.++||..|+. +++++||+++ ++++++++++.|+++++
T Consensus 300 -~~i~~~~~~~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il~ 361 (361)
T PRK00950 300 -NFVLVDVTPMTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIVE 361 (361)
T ss_pred -eEEEEECCCCCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHhC
Confidence 389999853 567788888889999999999954 5789999995 67799999999999874
No 97
>PLN02397 aspartate transaminase
Probab=100.00 E-value=2.2e-38 Score=321.10 Aligned_cols=325 Identities=17% Similarity=0.152 Sum_probs=231.9
Q ss_pred CCCCeEEecCCC-CCCCchhHhhhcccc--cccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCce---
Q 012785 92 GGERIINVDHGD-PTMYEKYWQKVGDKT--TIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHH--- 165 (456)
Q Consensus 92 ~~~~~i~l~~g~-p~~~~~~~~~~~~~~--~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~--- 165 (456)
.....++|+.|+ |+...++++.+.... ..+... .....|++..| .++||+++++|+...+....++++
T Consensus 46 ~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~-~~~~~Y~~~~G-----~~~LR~aia~~~~~~~~~~~~~~~i~~ 119 (423)
T PLN02397 46 PSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAG-SRNKEYLPIEG-----LAEFNKLSAKLAYGADSPAIKENRVAT 119 (423)
T ss_pred CCcceEecccceeeCCCCCcccchHHHHHHHHhhcc-CCCCCCCCcCC-----CHHHHHHHHHHHcCCCCchhhcCeeEe
Confidence 445679999996 665444332111110 111111 12336999999 599999999998544333222333
Q ss_pred --EEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc--------Ccccc----cc--CC
Q 012785 166 --IVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG--------DAKRF----NK--DG 229 (456)
Q Consensus 166 --I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~--------d~~~l----~~--~~ 229 (456)
|+.|+|+.+ +...+..++.+|| +|++++|+|+.|...++..|++++.+++ |.+.+ +. .+
T Consensus 120 ~~i~~g~Ga~~-l~~~~~~~~~pGd----~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~ 194 (423)
T PLN02397 120 VQCLSGTGSLR-LGAEFLARFYPGS----TIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDG 194 (423)
T ss_pred eecccchHHHH-HHHHHHHHhCCCC----EEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCC
Confidence 344555544 3334444556999 9999999999999999999999987754 23322 11 34
Q ss_pred CeEEEEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCCC-------CCC---CCCCCcEEEecCccccCCC
Q 012785 230 PYIELVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQYT-------SIT---YPADHDLMLFTVSKSTGHA 291 (456)
Q Consensus 230 ~~~i~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~~-------~~~---~~~~~~i~i~S~SK~~g~~ 291 (456)
++++++++||||||.++++ +|++++++||+||+|.+..+. ++. ...+++|+++||||+|+++
T Consensus 195 ~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~ 274 (423)
T PLN02397 195 SFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLY 274 (423)
T ss_pred CEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCc
Confidence 6888899999999999993 678899999999999865332 111 2235799999999999999
Q ss_pred CceEEEEE--EeCHHHHH----HHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHH
Q 012785 292 GTRIGWAL--VKDMEVAK----KMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLR 365 (456)
Q Consensus 292 G~RiG~l~--~~~~~~~~----~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ 365 (456)
|||+||++ ++++++++ .+.+.......+++.+.|.++..+|+ ++... ..+.++++.+++.+++||+.+.
T Consensus 275 G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~---~~~~~--~~~~~~~~~~~~~~~~rr~~l~ 349 (423)
T PLN02397 275 GERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILG---DPELF--SEWTKELKGMADRIISMRQKLY 349 (423)
T ss_pred cccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhC---CHHHH--HHHHHHHHHHHHHHHHHHHHHH
Confidence 99999985 43465544 34444444456788899999998887 22000 0012447889999999999999
Q ss_pred HHHHhcC---CccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEec-CCh
Q 012785 366 MAVQKSG---LFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISML-DRD 441 (456)
Q Consensus 366 ~~L~~~~---~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~-~~~ 441 (456)
+.|++++ .+.+..|+|+| |+|++++ .+++.++++++||.+.+ .+ |++++ .++
T Consensus 350 ~~L~~~~~~~~~~~~~p~gg~-------------fl~~~l~--~~~~~~Ll~~~~V~v~~-------~~--Ri~~~~~~~ 405 (423)
T PLN02397 350 DALEARGSPGDWSHITKQIGM-------------FSFTGLN--KEQVDRMTKEYHIYMTR-------DG--RISMAGLSS 405 (423)
T ss_pred HHHHhcCCCCCCCcccCCceE-------------EEecCCC--HHHHHHHHHhCCEEECC-------CC--eEEEeeCCH
Confidence 9999874 26667889998 9999985 45788888999999974 22 99998 499
Q ss_pred hHHHHHHHHHHhhhC
Q 012785 442 ENYNLFVQRLSKILS 456 (456)
Q Consensus 442 e~i~~~l~~L~~~l~ 456 (456)
+++++++++|+++++
T Consensus 406 ~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 406 KNVPYLADAIHAVVT 420 (423)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999863
No 98
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=5.7e-38 Score=306.04 Aligned_cols=294 Identities=18% Similarity=0.214 Sum_probs=217.9
Q ss_pred CCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCH
Q 012785 93 GERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGS 172 (456)
Q Consensus 93 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~ 172 (456)
..++|||+.+++++++ +.+.+... .+ .+. ...|+. ...||++++++++ ++|++|+|+
T Consensus 7 ~~~~i~l~~~~np~~p-~~~~~a~~-~~-~~~---~~~yp~--------~~~l~~~ia~~~~---------~~I~vt~G~ 63 (311)
T PRK08354 7 EEGLIDFSASVNPYPP-EWLDEMFE-RA-KEI---SGRYTY--------YEWLEEEFSKLFG---------EPIVITAGI 63 (311)
T ss_pred ccceeEecCCCCCCCC-HHHHHHHH-HH-HHH---hhcCCC--------hHHHHHHHHHHHC---------CCEEECCCH
Confidence 4578999999777763 44544321 11 111 235654 2679999999884 379999999
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCccccccC--CCeEEEEcCCCCCCcccchH--
Q 012785 173 TQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKRFNKD--GPYIELVTSPNNPDGSVRQS-- 248 (456)
Q Consensus 173 ~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~--~~~~i~v~~P~NPtG~~~~~-- 248 (456)
++++.+++..+ .+|| +|++++|+|+.|...++..|.+++.++.|.+.++.. ++++++++|||||||.+++.
T Consensus 64 ~~al~~~~~~~-~~gd----~vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~~vi~~~P~NPTG~~~~~~~ 138 (311)
T PRK08354 64 TEALYLIGILA-LRDR----KVIIPRHTYGEYERVARFFAARIIKGPNDPEKLEELVERNSVVFFCNPNNPDGKFYNFKE 138 (311)
T ss_pred HHHHHHHHHhh-CCCC----eEEEeCCCcHHHHHHHHHcCCEEeecCCCHHHHHHhhcCCCEEEEecCCCCCCCccCHHH
Confidence 99999888544 4898 999999999999999999999999998888877542 56788999999999999983
Q ss_pred ------HhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCCh
Q 012785 249 ------VVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSK 322 (456)
Q Consensus 249 ------l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~ 322 (456)
+|+++++++|+||+|.+..+.......+++|+++||||+||+||+|+||+++ +.+.+++.+. .+..+.
T Consensus 139 l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~l~GlRiG~~v~----~~~~l~~~~~--~~~~~~ 212 (311)
T PRK08354 139 LKPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYGLPGIRVGYVKG----FEEAFRSVRM--PWSIGS 212 (311)
T ss_pred HHHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcCCccceeeeeee----hHHHHHHcCC--CccCCH
Confidence 5788999999999998643322222367899999999999999999999998 3455655543 456677
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeec
Q 012785 323 DSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKC 402 (456)
Q Consensus 323 ~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~ 402 (456)
..|.++..+++ +. .+++++.++.++++++.+.+.+. ..+.| +|+|+++
T Consensus 213 ~~~~~~~~~~~---~~--------~~~~~~~~~~~~~~~~~l~~~l~-------~~~~~--------------~~~~~~~ 260 (311)
T PRK08354 213 TGYAFLEFLIE---DD--------FEHLRKTMPLIWREKERFEKALY-------VKSDA--------------NFFIKDV 260 (311)
T ss_pred HHHHHHHHHHH---hH--------HHHHHHHHHHHHHHHHHHHHhcC-------CCCCC--------------cEEEEEC
Confidence 77777777765 22 24555666666666655544431 12333 3666776
Q ss_pred CccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 403 EQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 403 ~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
+ +.+.+.+.++++||.++||..|+. ++++||+++ .+++.+++++.|++++
T Consensus 261 ~-~~~~~~~~l~~~gv~v~~g~~f~~-~~~iRi~~~-~~~~~~~l~~al~~~~ 310 (311)
T PRK08354 261 G-DAEKFVEFLKRNGILVRDCTSFGL-PGYIRFSVR-DREENEKLIRALREWR 310 (311)
T ss_pred C-CHHHHHHHHHHCCeEEEecccCCC-CCeEEEEeC-CHHHHHHHHHHHHHhh
Confidence 5 345677778899999999999974 689999995 5556677777777653
No 99
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-38 Score=313.29 Aligned_cols=299 Identities=17% Similarity=0.193 Sum_probs=228.1
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGST 173 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~ 173 (456)
.++|+|+.++|++++++.+.+... ..+... ....|++ .| .++||+++++|++. ++++|++|+|++
T Consensus 18 ~~~i~l~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~Y~~-~g-----~~~lr~~ia~~~~~------~~~~I~~t~G~~ 82 (337)
T PRK03967 18 NYRIWLDKNENPFDLPEELKEEIF-EELKRV--PFNRYPH-IT-----SDPLREAIAEFYGL------DAENIAVGNGSD 82 (337)
T ss_pred CceEEecCCCCCCCCCHHHHHHHH-HHhhcC--ccccCCC-CC-----HHHHHHHHHHHhCc------CcceEEEcCCHH
Confidence 467999999998876654443321 112111 1346875 57 59999999999963 468999999999
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc------ccccc--CCCeEEEEcCCCCCCccc
Q 012785 174 QLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA------KRFNK--DGPYIELVTSPNNPDGSV 245 (456)
Q Consensus 174 ~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~------~~l~~--~~~~~i~v~~P~NPtG~~ 245 (456)
+++..++..+ +|| +|++++|+|+.|...++..|.+++.+++|. +.++. .++++++++|||||||.+
T Consensus 83 ~~l~~~~~~~--~gd----~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~v~~~~P~NPtG~~ 156 (337)
T PRK03967 83 ELISYLVKLF--EGK----HIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKAKNASAVFICSPNNPTGNL 156 (337)
T ss_pred HHHHHHHHHh--CCC----eEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhccCCCEEEEeCCCCCCCCC
Confidence 9999998876 688 999999999999999999999998876653 23332 356888899999999999
Q ss_pred chH-----HhhhcCcEEEeeecCCCCCC---CCCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhcc
Q 012785 246 RQS-----VVNRSGGILVHDLAYYWPQY---TSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNT 317 (456)
Q Consensus 246 ~~~-----l~~~~~~~iI~De~y~~~~~---~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~ 317 (456)
++. ++ ++++++|+||+|.+... .+.....+++|+++||||.||+||+|+||++++ +++++++.+... .
T Consensus 157 ~~~~~l~~i~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~-~~~i~~~~~~~~--~ 232 (337)
T PRK03967 157 QPEEEILKVL-ETGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIAN-EEIIDALYRIKP--P 232 (337)
T ss_pred CCHHHHHHHH-hcCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecC-HHHHHHHHhhcC--C
Confidence 984 55 47999999999985322 122234578999999999999999999999996 999999988764 5
Q ss_pred CcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCce
Q 012785 318 IGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAF 397 (456)
Q Consensus 318 ~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f 397 (456)
++++.++|.++..+|+ + .+++.+.++.+.++|+.+.+.|.+. ..+.+++ |
T Consensus 233 ~~~~~~~q~~~~~~l~---~---------~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~~-------------~ 282 (337)
T PRK03967 233 FSLNILTMKIVRLALD---H---------YDLIEERIDYIIKERERVRRELGEY-----AYPSDAN-------------F 282 (337)
T ss_pred CCCCHHHHHHHHHHHh---C---------HHHHHHHHHHHHHHHHHHHHHhccC-----cCCCCCc-------------E
Confidence 6789999999999887 2 2355555666677788888888753 1234444 9
Q ss_pred EEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 398 AWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 398 ~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
+|++++ +.+.|.++||.|+++.. ..++++||+++ ++++.+++++.|+++.
T Consensus 283 ~~~~~~-----~~~~l~~~gi~v~~~~~--~~~~~~Ri~~~-~~~~~~~l~~~l~~~~ 332 (337)
T PRK03967 283 LLLKLD-----AYDYLLENGIVVRKLSG--RLEGHIRVTVG-KREENDEFIKALKEIK 332 (337)
T ss_pred EEEhHH-----HHHHHHHCCEEEEeCCC--CCCCeEEEecC-CHHHHHHHHHHHHHHH
Confidence 999873 66777789999998653 24679999995 5566777887777664
No 100
>PLN02368 alanine transaminase
Probab=100.00 E-value=1.1e-38 Score=320.06 Aligned_cols=257 Identities=15% Similarity=0.149 Sum_probs=202.0
Q ss_pred cccccCCCCcccCCCHHHHHHHHHHHHHh-cCccCCCceEEEccCHHHHHHHHHHHhc-CCCCCCCcEEEEeCCCCCChh
Q 012785 128 LSYFSDVRNLCWFLEPEFAKEVVRLHKVV-GNAITENHHIVVGTGSTQLFQAALYALS-SQDASEPISVVSAAPYYSSYP 205 (456)
Q Consensus 128 ~~~y~~~~G~~~~~~~~lr~aia~~~~~~-g~~~~~~~~I~~t~G~~~al~~~~~~l~-~~gd~~~~~Vlv~~P~y~~~~ 205 (456)
...|++..| .++||++||+|+.+. |.... +++|++|+|+++++..++++++ ++|| +|++++|+|+.|.
T Consensus 100 ~~~Y~~~~G-----~~~LR~aia~~~~~~~g~~~~-~~~I~it~Ga~~al~~~~~~l~~~pGd----~Vli~~P~Y~~y~ 169 (407)
T PLN02368 100 LGAYSDSRG-----LPGVRKEVAEFIERRDGYPSD-PELIFLTDGASKGVMQILNAVIRGEKD----GVLVPVPQYPLYS 169 (407)
T ss_pred CCCCCCCCC-----CHHHHHHHHHHHHHhcCCCCC-hhhEEEcccHHHHHHHHHHHHcCCCCC----EEEEeCCCCccHH
Confidence 457999999 599999999999654 66664 5799999999999999999987 6999 9999999999999
Q ss_pred hhhhhcCCeEeeeccCc--------ccccc---C------CCeEEEEcCCCCCCcccchH--------HhhhcCcEEEee
Q 012785 206 SITDCVKSRLYKWAGDA--------KRFNK---D------GPYIELVTSPNNPDGSVRQS--------VVNRSGGILVHD 260 (456)
Q Consensus 206 ~~~~~~g~~~~~~~~d~--------~~l~~---~------~~~~i~v~~P~NPtG~~~~~--------l~~~~~~~iI~D 260 (456)
..++..|.+++.++++. +.++. . ++++++++|||||||.++++ +|++++++||+|
T Consensus 170 ~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~D 249 (407)
T PLN02368 170 ATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGD 249 (407)
T ss_pred HHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 99999999998776543 33322 1 57889999999999999993 688999999999
Q ss_pred ecCCCCCC------CCCC----C------CCCCcEEEecCcccc-CCCCceEEEEEE--eCHHHHHHHHHHHhhccCcCC
Q 012785 261 LAYYWPQY------TSIT----Y------PADHDLMLFTVSKST-GHAGTRIGWALV--KDMEVAKKMTKYIELNTIGVS 321 (456)
Q Consensus 261 e~y~~~~~------~~~~----~------~~~~~i~i~S~SK~~-g~~G~RiG~l~~--~~~~~~~~l~~~~~~~~~~~s 321 (456)
|+|.+..| .++. . ..+++|+++||||+| |+||+|+||+++ .++++++.+.+... ..++++
T Consensus 250 E~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~-~~~~~~ 328 (407)
T PLN02368 250 EVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVAS-IALSPN 328 (407)
T ss_pred ccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhc-ccCCCC
Confidence 99986332 1211 0 134899999999998 899999999995 13889999988753 467899
Q ss_pred hHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEee
Q 012785 322 KDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLK 401 (456)
Q Consensus 322 ~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~ 401 (456)
.++|.++.++|+....+... ...+.++++.+++.+++||+.+.+.|++++++.+..|+|+| |+|++
T Consensus 329 ~~~Q~aa~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gaf-------------y~~~~ 394 (407)
T PLN02368 329 VSGQIFMGLMVNPPKPGDIS-YDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAM-------------YSFPQ 394 (407)
T ss_pred cHHHHHHHHHhCCCCCCCcc-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeee-------------EeccC
Confidence 99999999999721101000 00012333557899999999999999998778899999999 99987
Q ss_pred cCccHHHH
Q 012785 402 CEQEIEDC 409 (456)
Q Consensus 402 ~~~~~~~~ 409 (456)
++-..+.+
T Consensus 395 i~lp~~~~ 402 (407)
T PLN02368 395 IKLPPKAI 402 (407)
T ss_pred CCCCHHHH
Confidence 75444433
No 101
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=6.3e-38 Score=315.07 Aligned_cols=292 Identities=16% Similarity=0.164 Sum_probs=224.0
Q ss_pred cccccCCCCcccCCCHHHHHHHHHHHHHhcCccC--CCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChh
Q 012785 128 LSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAIT--ENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYP 205 (456)
Q Consensus 128 ~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~--~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~ 205 (456)
...|+++.| .++||+++++++...+.... +.++|++|+|+++++.+++.+++++|| +|++++|+|+.|.
T Consensus 37 ~~~Y~~~~G-----~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd----~Vlv~~P~y~~~~ 107 (388)
T PRK08637 37 IFPYAPPQG-----IPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGD----TVLLPDHNWGNYK 107 (388)
T ss_pred ccCCCCCCC-----CHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCC----EEEEcCCCCccHH
Confidence 457999999 59999999999854443332 236899999999999999999999999 9999999999999
Q ss_pred hhhh-hcCCeEeeecc--Cc-----ccccc-------CCCeEEEEcCCCCCCcccchH--------Hhhh-----cCcEE
Q 012785 206 SITD-CVKSRLYKWAG--DA-----KRFNK-------DGPYIELVTSPNNPDGSVRQS--------VVNR-----SGGIL 257 (456)
Q Consensus 206 ~~~~-~~g~~~~~~~~--d~-----~~l~~-------~~~~~i~v~~P~NPtG~~~~~--------l~~~-----~~~~i 257 (456)
..+. ..|++++.+++ +. +.++. ...++++++|||||||.+++. +|++ ++++|
T Consensus 108 ~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~i 187 (388)
T PRK08637 108 LTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVA 187 (388)
T ss_pred HHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEE
Confidence 8764 68999988776 32 22221 234567889999999999993 4443 89999
Q ss_pred EeeecCCCCCCC-----CC----CCCCCCcE--EEecCccccCCCCceEEEEEEeC-----HHHHHHHHHHH----hhcc
Q 012785 258 VHDLAYYWPQYT-----SI----TYPADHDL--MLFTVSKSTGHAGTRIGWALVKD-----MEVAKKMTKYI----ELNT 317 (456)
Q Consensus 258 I~De~y~~~~~~-----~~----~~~~~~~i--~i~S~SK~~g~~G~RiG~l~~~~-----~~~~~~l~~~~----~~~~ 317 (456)
|+||+|.+..+. ++ ....++++ +++||||.+++||+|+||+++++ +++++.+.+.. ....
T Consensus 188 I~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 267 (388)
T PRK08637 188 VVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNI 267 (388)
T ss_pred EecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhccc
Confidence 999999864332 11 12335754 45699999999999999999753 67887776532 1234
Q ss_pred CcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcC---CccccCCCCcccccccccCCCC
Q 012785 318 IGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSG---LFSVPELPSQFCTFLGRAFEPQ 394 (456)
Q Consensus 318 ~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~g~~~~~~~~~~~~~ 394 (456)
.++|.+.|.++..+|+ ++ .+.+++++.+..++++++.+.+.|++.+ .+.+.+|+||+
T Consensus 268 ~~~s~~~q~a~~~~l~---~~------~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~----------- 327 (388)
T PRK08637 268 SNGPHPSQSAVLRALN---SP------EFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGY----------- 327 (388)
T ss_pred CCCCcHHHHHHHHHhC---CH------HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceE-----------
Confidence 5789999999999997 33 2356777888889999999999997752 46666777777
Q ss_pred CceEEeecCc-cHHHHHHHH-HhCCEEeecCCCCCCCCCeEEEEecC-ChhHHHHHHHHHHhhh
Q 012785 395 PAFAWLKCEQ-EIEDCESFL-KGNKILTRSGKHFGFSPKYVRISMLD-RDENYNLFVQRLSKIL 455 (456)
Q Consensus 395 ~~f~~~~~~~-~~~~~~~~l-~~~gI~v~pg~~fg~~~~~iRis~~~-~~e~i~~~l~~L~~~l 455 (456)
|+|++++. +.+.+.+.+ +++||.+.+. +++++||+++. +++++++++++|++++
T Consensus 328 --~~~~~l~~~~~~~l~~~l~~~~gv~~~~~-----~~~~iRi~~~~~~~~~i~~~~~~l~~~~ 384 (388)
T PRK08637 328 --FMCLKLKGVDAEELRVHLLEKYGIGTIAL-----NETDLRIAFSCVEEEDIPELFDSIYKAI 384 (388)
T ss_pred --EEEecCChHHHHHHHHHHhhhcceEEEec-----cCCceEEEeecCCHHHHHHHHHHHHHHH
Confidence 99999974 344555555 6789998752 36789999987 8899999999999876
No 102
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=4.1e-38 Score=309.57 Aligned_cols=301 Identities=17% Similarity=0.231 Sum_probs=239.3
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccC
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTG 171 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G 171 (456)
.++++++|+.|.|+++.| ... .......+|+++.| ++||++++++++. ++++|++|+|
T Consensus 15 ~~~~~~~~~~~~~~~~~~--~~~--------~~~~~~~~y~~~~~------~~lr~~la~~~~~------~~~~i~~t~G 72 (330)
T TIGR01140 15 PPEDWLDFSTGINPLGPP--VPP--------IPASAWARYPDPEY------DELRAAAAAYYGL------PAASVLPVNG 72 (330)
T ss_pred ChhheeEccccCCCCCCC--hhh--------cchHHHhhCCCccH------HHHHHHHHHHhCC------ChhhEEECCC
Confidence 345689999999887765 111 11122456888776 9999999999863 4679999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCccccccC--CCeEEEEcCCCCCCcccchH-
Q 012785 172 STQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKRFNKD--GPYIELVTSPNNPDGSVRQS- 248 (456)
Q Consensus 172 ~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~--~~~~i~v~~P~NPtG~~~~~- 248 (456)
+++++.++..++ .+| +|++++|+|..+...++..|.+++.++ |.+.++.. +++++++++||||||.+++.
T Consensus 73 ~~~~i~~~~~~l-~~g-----~vl~~~p~y~~~~~~~~~~g~~~~~~~-d~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~ 145 (330)
T TIGR01140 73 AQEAIYLLPRLL-APG-----RVLVLAPTYSEYARAWRAAGHEVVELP-DLDRLPAALEELDVLVLCNPNNPTGRLIPPE 145 (330)
T ss_pred HHHHHHHHHHHh-CCC-----eEEEeCCCcHHHHHHHHHcCCEEEEeC-CHHHHHhhcccCCEEEEeCCCCCCCCCCCHH
Confidence 999999987664 554 699999999999999999999999988 87766542 56789999999999999982
Q ss_pred -------HhhhcCcEEEeeecCCCCCCC-CCC---CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhcc
Q 012785 249 -------VVNRSGGILVHDLAYYWPQYT-SIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNT 317 (456)
Q Consensus 249 -------l~~~~~~~iI~De~y~~~~~~-~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~ 317 (456)
+|+++|++||+||+|.+..+. ++. ...+++|+++||||.+|+||+|+||++++ +++++++..... .
T Consensus 146 ~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~--~ 222 (330)
T TIGR01140 146 TLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAH-PALLARLREALG--P 222 (330)
T ss_pred HHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCC-HHHHHHHHhcCC--C
Confidence 678899999999999853322 221 23578999999999999999999999996 889999887764 5
Q ss_pred CcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCce
Q 012785 318 IGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAF 397 (456)
Q Consensus 318 ~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f 397 (456)
++++.++|.++..+++ + .++.++.+++++++++.+.+.|++++.+.+. +.+++ |
T Consensus 223 ~~~s~~~q~~~~~~l~---~---------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~-------------f 276 (330)
T TIGR01140 223 WTVNGPARAAGRAALA---D---------TAWQAATRARLAAERARLAALLARLGGLEVV-GGTAL-------------F 276 (330)
T ss_pred CCchHHHHHHHHHHHh---c---------hHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCe-------------E
Confidence 6788999999999987 2 3567788999999999999999988654443 33444 8
Q ss_pred EEeecCccHHHHHHHHHhCCEEeecCCCCC-CCCCeEEEEecCChhHHHHHHHHHH
Q 012785 398 AWLKCEQEIEDCESFLKGNKILTRSGKHFG-FSPKYVRISMLDRDENYNLFVQRLS 452 (456)
Q Consensus 398 ~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg-~~~~~iRis~~~~~e~i~~~l~~L~ 452 (456)
+|++++. ..++.+.|.++||.++||..|+ .+.+++||+++.+.++ +.++++|+
T Consensus 277 ~~~~~~~-~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~-~~~~~~l~ 330 (330)
T TIGR01140 277 LLVRTPD-AAALHEALARRGILIRDFDNFPGLDPRYLRFALPTDEEN-DRLEEALA 330 (330)
T ss_pred EEEEcCC-HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEecCHHHH-HHHHHhhC
Confidence 9999874 4567778888999999999995 4568999999765555 77777663
No 103
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=1.2e-37 Score=308.72 Aligned_cols=309 Identities=22% Similarity=0.298 Sum_probs=244.9
Q ss_pred CCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCH
Q 012785 93 GERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGS 172 (456)
Q Consensus 93 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~ 172 (456)
++++|||+.|+|+++.++.+.+..... . .. ...|+++.| ++||+++|++++. ++++|++|+|+
T Consensus 18 ~~~~i~l~~~~~~~~~~~~~~~a~~~~-~-~~---~~~y~~~~~------~~lr~~ia~~~~~------~~~~i~~~~G~ 80 (346)
T TIGR01141 18 GKEVIKLNSNENPFGPPPKAKEALRAE-A-DK---LHRYPDPDP------AELKQALADYYGV------DPEQILLGNGS 80 (346)
T ss_pred CCceEEccCCCCCCCCCHHHHHHHHHh-H-HH---hhcCCCCCH------HHHHHHHHHHhCc------ChHHEEEcCCH
Confidence 357999999998887776555432211 1 11 245887776 8999999999973 45799999999
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc------ccccc---CCCeEEEEcCCCCCCc
Q 012785 173 TQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA------KRFNK---DGPYIELVTSPNNPDG 243 (456)
Q Consensus 173 ~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~------~~l~~---~~~~~i~v~~P~NPtG 243 (456)
++++..++.++..+|| +|++++|+|+.+...++..|.+++.++.+. +.++. .+++++++++||||||
T Consensus 81 ~~~l~~~~~~l~~~gd----~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG 156 (346)
T TIGR01141 81 DEIIELLIRAFLEPGD----AVLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTG 156 (346)
T ss_pred HHHHHHHHHHhcCCCC----EEEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCC
Confidence 9999999999999999 999999999999989999999998876543 33332 3678999999999999
Q ss_pred ccchH-----Hhhhc--CcEEEeeecCCCCCCC----CCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHH
Q 012785 244 SVRQS-----VVNRS--GGILVHDLAYYWPQYT----SITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKY 312 (456)
Q Consensus 244 ~~~~~-----l~~~~--~~~iI~De~y~~~~~~----~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~ 312 (456)
.+++. +++.. ++++|+||+|.+.... +.....+++++++||||.+|++|+|+||++++ ++++++++..
T Consensus 157 ~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~-~~~~~~~~~~ 235 (346)
T TIGR01141 157 NLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIAN-AEIIDALNKV 235 (346)
T ss_pred CCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecC-HHHHHHHHhc
Confidence 99983 56554 9999999999853221 11123457899999999999899999999996 9999998876
Q ss_pred HhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCC
Q 012785 313 IELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFE 392 (456)
Q Consensus 313 ~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~ 392 (456)
.. .++.++++|.++.++++ + ..++++.++.++++++.+.+.|++++++.+. +.++.
T Consensus 236 ~~--~~~~~~~~~~~~~~~l~---~---------~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~--------- 291 (346)
T TIGR01141 236 RA--PFNLSRLAQAAAIAALR---D---------DDFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDAN--------- 291 (346)
T ss_pred cC--CCCCCHHHHHHHHHHhC---C---------HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCC---------
Confidence 54 57789999999988886 2 2468889999999999999999987555543 22333
Q ss_pred CCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHH
Q 012785 393 PQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLS 452 (456)
Q Consensus 393 ~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~ 452 (456)
|+|++++.+.+.+.+.|.++||.+.||..|+..++++|+|++ ++++++++++.|+
T Consensus 292 ----~~~~~~~~~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~-~~~~i~~~~~~l~ 346 (346)
T TIGR01141 292 ----FVLIRFPRDADALFEALLEKGIIVRDLNSYPGLPNCLRITVG-TREENDRFLAALR 346 (346)
T ss_pred ----EEEEecCCCHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC-CHHHHHHHHHHhC
Confidence 899998755667788888999999999998544889999985 7889999988764
No 104
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=5.8e-37 Score=304.43 Aligned_cols=306 Identities=20% Similarity=0.277 Sum_probs=236.0
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGST 173 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~ 173 (456)
+++|+|+.++|++.+++.+.+... ..+ . ...+|++ .| .++||+++|++++. ++++|++|+|++
T Consensus 22 ~~~i~l~~~~~~~~~~~~~~~a~~-~~~-~---~~~~y~~-~g-----~~~lr~~ia~~~~~------~~~~I~~~~G~~ 84 (352)
T PRK03321 22 PGAIKLSSNETPFGPLPSVRAAIA-RAA-A---GVNRYPD-MG-----AVELRAALAEHLGV------PPEHVAVGCGSV 84 (352)
T ss_pred ccceeccCCCCCCCCCHHHHHHHH-HHH-H---hcCcCCC-Cc-----HHHHHHHHHHHhCc------CHHHEEECCCHH
Confidence 368999999999866655554322 111 1 2346765 57 59999999999963 467999999999
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc------ccccc---CCCeEEEEcCCCCCCcc
Q 012785 174 QLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA------KRFNK---DGPYIELVTSPNNPDGS 244 (456)
Q Consensus 174 ~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~------~~l~~---~~~~~i~v~~P~NPtG~ 244 (456)
+++..++.++.++|| +|+++.|+|..|...++..|.+++.++.|. +.++. .+++++++++||||||.
T Consensus 85 ~~l~~~~~~~~~~gd----~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~ 160 (352)
T PRK03321 85 ALCQQLVQATAGPGD----EVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAITDRTRLIFVCNPNNPTGT 160 (352)
T ss_pred HHHHHHHHHhcCCCC----EEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhccCCCEEEEeCCCCCcCC
Confidence 999999999999999 999999999999999999999998877652 22222 36789999999999999
Q ss_pred cchH-----Hhhh--cCcEEEeeecCCCCCCC-----CCC--CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHH
Q 012785 245 VRQS-----VVNR--SGGILVHDLAYYWPQYT-----SIT--YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMT 310 (456)
Q Consensus 245 ~~~~-----l~~~--~~~~iI~De~y~~~~~~-----~~~--~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~ 310 (456)
+++. +|+. +++++|+||+|.+..+. ++. ...+++++++||||.||+||+|+||++++ +++++.+.
T Consensus 161 ~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~-~~~~~~~~ 239 (352)
T PRK03321 161 VVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH-PEVIAALR 239 (352)
T ss_pred CcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC-HHHHHHHH
Confidence 9983 6655 69999999999753221 111 23468999999999999999999999997 99999998
Q ss_pred HHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccccccccc
Q 012785 311 KYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRA 390 (456)
Q Consensus 311 ~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~ 390 (456)
+.. ..+++|.++|.++.+.|. .. +++.+. .+.+.++++.+.+.|++.+ +.+.+ .+|+
T Consensus 240 ~~~--~~~~~s~~~q~~a~~~l~---~~--------~~~~~~-~~~~~~~r~~~~~~L~~~~-~~~~~-~~g~------- 296 (352)
T PRK03321 240 KVA--VPFSVNSLAQAAAIASLA---AE--------DELLER-VDAVVAERDRVRAALRAAG-WTVPP-SQAN------- 296 (352)
T ss_pred Hhc--CCCCCCHHHHHHHHHHhc---CH--------HHHHHH-HHHHHHHHHHHHHHHHHCC-CccCC-CCCC-------
Confidence 764 478899999999888886 21 344444 4445566678889998764 44332 2334
Q ss_pred CCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 391 FEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 391 ~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
|+|++++.+...+.+.|+++||.+++ |+ .+++||++ .++++++.++++|+++++
T Consensus 297 ------~i~i~l~~~~~~~~~~l~~~gI~v~~---~~--~~~iRi~~-~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 297 ------FVWLPLGERTADFAAAAAEAGVVVRP---FA--GEGVRVTI-GAPEENDAFLRAARAWRA 350 (352)
T ss_pred ------EEEEeCCCCHHHHHHHHHHCCEEEEc---cC--CCcEEEee-CCHHHHHHHHHHHHHHhc
Confidence 89999865567788888999999997 53 45699998 677899999999998763
No 105
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=283.95 Aligned_cols=332 Identities=18% Similarity=0.294 Sum_probs=257.6
Q ss_pred CCCCeEEecCCCCCCCc---hhHhhhccccccc----ccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hcCcc-CC
Q 012785 92 GGERIINVDHGDPTMYE---KYWQKVGDKTTIV----IPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAI-TE 162 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~---~~~~~~~~~~~~~----~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~-~~ 162 (456)
++.++|.||..++.... ..|+.+...+... .........|.+-.|+ +++|+++|+++.. .|+.+ -+
T Consensus 71 Np~GiIQmGlaENqlc~DL~~~wl~k~~~~~~~~~eg~~~f~~la~fqdy~Gl-----~~frqa~A~Fm~~~r~~~v~fd 145 (471)
T KOG0256|consen 71 NPLGIIQMGLAENQLCFDLIESWLSKNPEASNCTREGQSSFDELAMFQDYHGL-----PSFRQAVAEFMERARGNRVKFD 145 (471)
T ss_pred CchHHHHhhhhhhHHHHHHHHHHHHhChhhhhcccccccchhhHhhcccccCc-----hHHHHHHHHHHHHHhCCCCccC
Confidence 45578999998876422 2354431111111 1122234568888995 9999999999954 44443 35
Q ss_pred CceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhh-cCCeEeeecc--------Ccccccc------
Q 012785 163 NHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDC-VKSRLYKWAG--------DAKRFNK------ 227 (456)
Q Consensus 163 ~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~-~g~~~~~~~~--------d~~~l~~------ 227 (456)
|+++++++|++.+++.+.-.|++||| ..+++.|+|+++..-++. .|.+++++.. +.++++.
T Consensus 146 P~~~Vv~~G~T~ane~l~fcLadpgd----afLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~ 221 (471)
T KOG0256|consen 146 PERVVVTNGATSANETLMFCLADPGD----AFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQAR 221 (471)
T ss_pred ccceEEecccchhhHHHHHHhcCCCc----eeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHH
Confidence 78999999999999999999999999 999999999999877766 4788886554 3444432
Q ss_pred ---CCCeEEEEcCCCCCCcccchH--------HhhhcCcEEEeeecCCC-----CCCCCCC-------CCCCCcEEEecC
Q 012785 228 ---DGPYIELVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYW-----PQYTSIT-------YPADHDLMLFTV 284 (456)
Q Consensus 228 ---~~~~~i~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~-----~~~~~~~-------~~~~~~i~i~S~ 284 (456)
.+.+.++++||+||.|.++++ ++.++++++|+||+|.+ ..|.++. ..++++.++.|+
T Consensus 222 ~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivysl 301 (471)
T KOG0256|consen 222 KLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSL 301 (471)
T ss_pred HhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEe
Confidence 267899999999999999984 67889999999999985 3344432 146789999999
Q ss_pred ccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHH
Q 012785 285 SKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQL 364 (456)
Q Consensus 285 SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l 364 (456)
||.||+||+|+|.+...++.++...++... ...+|+..|+.++.+|.. .. -.+.++.+.+.+++.+.+++
T Consensus 302 SKD~GlpGfRvGviYS~ne~VvsaA~kmss--f~~vSs~tQ~~la~LLSD---~~-----f~~~yl~en~~Rl~~rh~~~ 371 (471)
T KOG0256|consen 302 SKDFGLPGFRVGVIYSNNEDVVSAATKMSS--FGLVSSQTQYLLASLLSD---EE-----FTREYLRENNKRLRIRHRYI 371 (471)
T ss_pred ccccCCCceEEEEEEecChHHHHHHHHHhh--ccCCcHHHHHHHHHHhch---HH-----HHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998999988888765 677899999999999983 21 14678889999999999999
Q ss_pred HHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--------cHHHHHH-HHHhCCEEeecCCCCC-CCCCeEE
Q 012785 365 RMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--------EIEDCES-FLKGNKILTRSGKHFG-FSPKYVR 434 (456)
Q Consensus 365 ~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--------~~~~~~~-~l~~~gI~v~pg~~fg-~~~~~iR 434 (456)
.+.|++++ +.+.+..+|+ |+|+++.. ..-.+++ .+.+-++.+.||+.|. ..++|+|
T Consensus 372 ~~gLk~lg-I~cl~s~AGl-------------F~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFR 437 (471)
T KOG0256|consen 372 VEGLKALG-IPCLKSNAGL-------------FCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWFR 437 (471)
T ss_pred HhhHHhcC-CceeecCCee-------------EEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCCeEE
Confidence 99999987 6777777777 99999852 1223444 4455599999999994 5799999
Q ss_pred EEecC-ChhHHHHHHHHHHhhhC
Q 012785 435 ISMLD-RDENYNLFVQRLSKILS 456 (456)
Q Consensus 435 is~~~-~~e~i~~~l~~L~~~l~ 456 (456)
++|+. .++.++.+++||+++++
T Consensus 438 vcFAn~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 438 VCFANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred EEeccCCHHHHHHHHHHHHHHHH
Confidence 99998 55566669999998863
No 106
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=8.1e-36 Score=283.01 Aligned_cols=298 Identities=17% Similarity=0.199 Sum_probs=247.2
Q ss_pred cccccCCCCcccCCCHHHHHHHHHHHH-HhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhh
Q 012785 128 LSYFSDVRNLCWFLEPEFAKEVVRLHK-VVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPS 206 (456)
Q Consensus 128 ~~~y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~ 206 (456)
..+|++..|+ ++|...|.++.+ ....+...+.+|++|+|.+++++.+++.+++.|| .|+++.++|+....
T Consensus 93 alQYg~s~G~-----peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd----~vlie~~ty~~AL~ 163 (472)
T KOG0634|consen 93 ALQYGQSSGI-----PELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGD----HVLIEEYTYPSALQ 163 (472)
T ss_pred hhccccccCc-----HHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCC----ceEEecccchHHHH
Confidence 3579999995 999999999765 4555555556899999999999999999999999 99999999999999
Q ss_pred hhhhcCCeEeeeccCcccccc-----------------CCCeEE-EEcCCCCCCcccch--------HHhhhcCcEEEee
Q 012785 207 ITDCVKSRLYKWAGDAKRFNK-----------------DGPYIE-LVTSPNNPDGSVRQ--------SVVNRSGGILVHD 260 (456)
Q Consensus 207 ~~~~~g~~~~~~~~d~~~l~~-----------------~~~~~i-~v~~P~NPtG~~~~--------~l~~~~~~~iI~D 260 (456)
..+..|++++++++|.+++.+ .+++++ -+++-|||||..++ +||++|+++||+|
T Consensus 164 s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeD 243 (472)
T KOG0634|consen 164 SMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVED 243 (472)
T ss_pred hccccCceEEeccccCCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEec
Confidence 999999999999998877632 134444 35566999999998 2899999999999
Q ss_pred ecCCCCCC--------------C----------CCC--CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHh
Q 012785 261 LAYYWPQY--------------T----------SIT--YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIE 314 (456)
Q Consensus 261 e~y~~~~~--------------~----------~~~--~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~ 314 (456)
|+|+...+ . .+. +..+|||.+.||||.++ ||+|+||+.++ +.+++++.....
T Consensus 244 dpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~~-~~~l~ril~~ae 321 (472)
T KOG0634|consen 244 DPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITGN-SLFLKRILDLAE 321 (472)
T ss_pred CccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeecC-HHHHHHHhhhcc
Confidence 99983111 0 011 34578999999999998 99999999996 889999988888
Q ss_pred hccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhc-C-C-ccccCCCCcccccccccC
Q 012785 315 LNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKS-G-L-FSVPELPSQFCTFLGRAF 391 (456)
Q Consensus 315 ~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~-~-~~~~~~~g~~~~~~~~~~ 391 (456)
..+.++|.++|.++-++|+..... .+-+|+.+++..|..||..+..+|.+. + . .++.+|.+||
T Consensus 322 ~~t~~pSg~sq~iv~a~l~~wgqe------G~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGm-------- 387 (472)
T KOG0634|consen 322 VATSGPSGFSQGIVYAMLKRWGQE------GFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGM-------- 387 (472)
T ss_pred eeecCcccccHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcce--------
Confidence 889999999999999999864332 135899999999999999999999875 3 2 6778888888
Q ss_pred CCCCceEEeecC-------cc----HHHHHHHHHhCCEEeecCCCCCC-----CCC-eEEEEecC-ChhHHHHHHHHHHh
Q 012785 392 EPQPAFAWLKCE-------QE----IEDCESFLKGNKILTRSGKHFGF-----SPK-YVRISMLD-RDENYNLFVQRLSK 453 (456)
Q Consensus 392 ~~~~~f~~~~~~-------~~----~~~~~~~l~~~gI~v~pg~~fg~-----~~~-~iRis~~~-~~e~i~~~l~~L~~ 453 (456)
|+|++++ .+ .+.+...+.++||.+.+|..|.. ... ++|++++. +.|+++++++|+..
T Consensus 388 -----Fiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~ 462 (472)
T KOG0634|consen 388 -----FIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGS 462 (472)
T ss_pred -----EEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHH
Confidence 9999996 32 34566788899999999999942 133 99999987 89999999999988
Q ss_pred hh
Q 012785 454 IL 455 (456)
Q Consensus 454 ~l 455 (456)
++
T Consensus 463 ~i 464 (472)
T KOG0634|consen 463 VI 464 (472)
T ss_pred HH
Confidence 76
No 107
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.3e-32 Score=244.26 Aligned_cols=333 Identities=17% Similarity=0.219 Sum_probs=248.5
Q ss_pred cCCCCeEEecCCCCCCCch--hHhhhcccccccccC--ccccccccCCCCcccCCCHHHHHHHHHHHH-HhcCccCCCce
Q 012785 91 DGGERIINVDHGDPTMYEK--YWQKVGDKTTIVIPG--WQSLSYFSDVRNLCWFLEPEFAKEVVRLHK-VVGNAITENHH 165 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~~~~~--~~~~~~~~~~~~~~~--~~~~~~y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~ 165 (456)
...+..|.|+-|+|...+. ...+.. .+..+.++ .+.+..|..++| ...|.+++++.++ .+|...+ +++
T Consensus 27 Lrt~g~imLggGNPa~iPem~~~f~~~-~aemla~~~~~e~~cnY~~pQG-----~~~li~ala~~l~~~ygwnit-~~N 99 (417)
T COG3977 27 LRTPGAIMLGGGNPARIPEMDDYFQDL-LAEMLASGKATEALCNYDGPQG-----KAVLIDALAKMLRREYGWNIT-AQN 99 (417)
T ss_pred ccCCCceeeCCCCcccChhHHHHHHHH-HHHHHhcchHHHHHhcCCCCcc-----hhHHHHHHHHHHHHHhCCCCc-cce
Confidence 3445689999999975532 111111 11112222 233567998999 6999999999995 5899987 579
Q ss_pred EEEccCHHHHHHHHHHHhcCC-CCCCCcEEEEe-CCCCCChhhhhhhcC-------------CeEeeeccCcccccc-CC
Q 012785 166 IVVGTGSTQLFQAALYALSSQ-DASEPISVVSA-APYYSSYPSITDCVK-------------SRLYKWAGDAKRFNK-DG 229 (456)
Q Consensus 166 I~~t~G~~~al~~~~~~l~~~-gd~~~~~Vlv~-~P~y~~~~~~~~~~g-------------~~~~~~~~d~~~l~~-~~ 229 (456)
|.+|+|++.+++-++..+... .|.+.++|+++ .|.|-+|..+.-.-. ...+.+..|++.+.. ++
T Consensus 100 IalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~e~ 179 (417)
T COG3977 100 IALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHIGES 179 (417)
T ss_pred eeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCcccccccceeeccCHHHcccccc
Confidence 999999999999999887432 12223367776 799988876532211 111245567776654 36
Q ss_pred CeEEEEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCCCCC-----C-CCCCCcEEEecCccccCCCCceE
Q 012785 230 PYIELVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQYTSI-----T-YPADHDLMLFTVSKSTGHAGTRI 295 (456)
Q Consensus 230 ~~~i~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~~~~-----~-~~~~~~i~i~S~SK~~g~~G~Ri 295 (456)
+.+|+++.|.||||.++++ +++.+|+++|+|.+|.-| |+.+ . ...+|.|.|.|+|| +|+||.|+
T Consensus 180 ~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~P-FP~iifsd~~~~w~~NiilC~SLSK-~GLPG~R~ 257 (417)
T COG3977 180 TGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVP-FPGIIFSDATPLWNENIILCMSLSK-LGLPGSRC 257 (417)
T ss_pred cceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCC-CCceecccccccCCCCEEEEeehhh-cCCCCcce
Confidence 7899999999999999984 788999999999999853 2221 1 34589999999999 69999999
Q ss_pred EEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHH-HHHHHHHHHHHHHHHHHHHhc---
Q 012785 296 GWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFF-EFTNHQMSTRWKQLRMAVQKS--- 371 (456)
Q Consensus 296 G~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~l~~~L~~~--- 371 (456)
|-+++. +++++.+.+........++.+.+++++.+++ .+.. .+.- +-.+..|+++.+...+.|++.
T Consensus 258 GIiIan-e~viqaitnmn~iisLap~~~G~Aia~~mie---~gdl------~rlseqVIrPFY~~~~q~~~~~l~~~lp~ 327 (417)
T COG3977 258 GIIIAN-EKVIQAITNMNGIISLAPGRMGPAIAAEMIE---SGDL------LRLSEQVIRPFYRNRVQTTIAILRRYLPE 327 (417)
T ss_pred eEEEcc-HHHHHHHHhccceeeecCCCccHHHHHHHhh---cchH------HHHHHHhhhHHHHHHHHHHHHHHHHhcCc
Confidence 999995 9999999999888889999999999999998 4421 2222 234566777777777777653
Q ss_pred CCccccCCCCcccccccccCCCCCceEEee---cCccHHHHHHHHHhCCEEeecCCCCCC--------CCCeEEEEecCC
Q 012785 372 GLFSVPELPSQFCTFLGRAFEPQPAFAWLK---CEQEIEDCESFLKGNKILTRSGKHFGF--------SPKYVRISMLDR 440 (456)
Q Consensus 372 ~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~---~~~~~~~~~~~l~~~gI~v~pg~~fg~--------~~~~iRis~~~~ 440 (456)
..+.+.+|+|.. |+|+= +|-+.+.+++.|++.||++.||+.|.. ...++|+++..+
T Consensus 328 ~~~~iHkpEGAI-------------FlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~ 394 (417)
T COG3977 328 YRCLIHKPEGAI-------------FLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPE 394 (417)
T ss_pred cceeeecCCcce-------------eehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecCCC
Confidence 246788888887 65553 466889999999999999999999943 245899999889
Q ss_pred hhHHHHHHHHHHhhh
Q 012785 441 DENYNLFVQRLSKIL 455 (456)
Q Consensus 441 ~e~i~~~l~~L~~~l 455 (456)
++.+++++.+|.+.+
T Consensus 395 ~~~ie~Gva~lae~v 409 (417)
T COG3977 395 PEKIEKGVAILAEEV 409 (417)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998764
No 108
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=3.9e-30 Score=254.53 Aligned_cols=321 Identities=22% Similarity=0.302 Sum_probs=251.7
Q ss_pred EEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHH
Q 012785 97 INVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLF 176 (456)
Q Consensus 97 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al 176 (456)
|||+.|++++.+++........ .........|++..| ..++++.++++++.........+++++++|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-----~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~ 72 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAA---AALRAGLLGYYPDPG-----LPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEAL 72 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHH---HhhccCCCCCCCCCC-----cHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHH
Confidence 5789999888776655543221 111112235777777 59999999999976322222356899999999999
Q ss_pred HHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCccc--------c---ccCCCeEEEEcCCCCCCccc
Q 012785 177 QAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKR--------F---NKDGPYIELVTSPNNPDGSV 245 (456)
Q Consensus 177 ~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~--------l---~~~~~~~i~v~~P~NPtG~~ 245 (456)
..++.++..+|+ +|+++.|+|+.+...++..|.+++.++.+.+. + ...+++++++++|+||||.+
T Consensus 73 ~~~~~~~~~~g~----~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~ 148 (350)
T cd00609 73 SLLLRALLNPGD----EVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAV 148 (350)
T ss_pred HHHHHHhCCCCC----EEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcc
Confidence 999999999999 99999999999999999999998877664322 1 12367899999999999999
Q ss_pred ch--------HHhhhcCcEEEeeecCCCCCCCC-------CCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHH
Q 012785 246 RQ--------SVVNRSGGILVHDLAYYWPQYTS-------ITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMT 310 (456)
Q Consensus 246 ~~--------~l~~~~~~~iI~De~y~~~~~~~-------~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~ 310 (456)
++ ++|+++|+++|+|++|.+..+.+ .....+.+++++|+||.++++|.|+||++++++++.+.++
T Consensus 149 ~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~ 228 (350)
T cd00609 149 LSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLK 228 (350)
T ss_pred cCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHH
Confidence 87 37889999999999998532211 1234567899999999999899999999997338999999
Q ss_pred HHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccccccccc
Q 012785 311 KYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRA 390 (456)
Q Consensus 311 ~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~ 390 (456)
......+.+.+...|.++..+|+. . .+..++.++.++++++.+.+.|++.+......+.+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~l~~---~--------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~------- 290 (350)
T cd00609 229 KLLPYTTSGPSTLSQAAAAAALDD---G--------EEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGF------- 290 (350)
T ss_pred HHHHhcccCCChHHHHHHHHHHhC---c--------HHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccE-------
Confidence 888777788999999999988872 2 2578889999999999999999987654323334444
Q ss_pred CCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCC-CCCCeEEEEecCChhHHHHHHHHHHh
Q 012785 391 FEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFG-FSPKYVRISMLDRDENYNLFVQRLSK 453 (456)
Q Consensus 391 ~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg-~~~~~iRis~~~~~e~i~~~l~~L~~ 453 (456)
|+|++++. +.+.+.+++.++||.+.++..|. ....++|++++..+++++.++++|++
T Consensus 291 ------~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~~ 350 (350)
T cd00609 291 ------FLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLAE 350 (350)
T ss_pred ------EEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhhC
Confidence 89999865 46678889999999999998885 35789999998778999999999863
No 109
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.97 E-value=4.6e-29 Score=245.59 Aligned_cols=270 Identities=16% Similarity=0.133 Sum_probs=208.4
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEe---CCCCCChhhhhhhcCCeEeee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSA---APYYSSYPSITDCVKSRLYKW 218 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~---~P~y~~~~~~~~~~g~~~~~~ 218 (456)
+.+|++.+|++++. +++++++++|+.+++..++.++.++|| +|+++ .|+|+.|...++..|++++.+
T Consensus 56 ~~~Le~~lA~~~g~------~~e~ilv~~gg~~a~~~~~~al~~~gd----~Vli~~~d~p~~~s~~~~~~l~ga~~~~~ 125 (346)
T TIGR03576 56 EEKVQELGREHLGG------PEEKILVFNRTSSAILATILALEPPGR----KVVHYLPEKPAHPSIPRSCKLAGAEYFES 125 (346)
T ss_pred HHHHHHHHHHHcCC------CcceEEEECCHHHHHHHHHHHhCCCCC----EEEECCCCCCCchhHHHHHHHcCCEEecc
Confidence 47888888888865 567999999999999999999999999 99874 579999999999999987654
Q ss_pred ccCcccccc-CCCeEEEEcCCCCCCcccch--------HHhhhcCcEEEeeecCCCCC---CC-CCCCCCCCcEEEecCc
Q 012785 219 AGDAKRFNK-DGPYIELVTSPNNPDGSVRQ--------SVVNRSGGILVHDLAYYWPQ---YT-SITYPADHDLMLFTVS 285 (456)
Q Consensus 219 ~~d~~~l~~-~~~~~i~v~~P~NPtG~~~~--------~l~~~~~~~iI~De~y~~~~---~~-~~~~~~~~~i~i~S~S 285 (456)
. |.+.++. .++++|++ +++||+|.+++ ++|+++++++|+||+|.... +. +.....+..++++|||
T Consensus 126 ~-~l~~l~~~~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~S 203 (346)
T TIGR03576 126 D-ELSELKKIDGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTD 203 (346)
T ss_pred C-CHHHHhhCcCceEEEE-ECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEeccc
Confidence 2 4443432 35677777 56799999865 25788999999999998531 11 1111123458889999
Q ss_pred cccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHH
Q 012785 286 KSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLR 365 (456)
Q Consensus 286 K~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ 365 (456)
| +++|+|+||++++ +++++.+.+......++.+++.|.++.++|+. . ..+..++.+++|++.+.
T Consensus 204 K--alaG~r~G~v~~~-~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~---~----------~~~~~~~~l~~r~~~~~ 267 (346)
T TIGR03576 204 K--LMDGPRGGLLAGR-KELVDKIKSVGEQFGLEAQAPLLAAVVRALEE---F----------ELSRIRDAFKRKEEVYL 267 (346)
T ss_pred h--hccccceEEEEeC-HHHHHHHHHhhcCcccCccHHHHHHHHHHHhh---c----------cHHHHHHHHHHHHHHHH
Confidence 9 5789999999997 99999999987655666789999999998872 1 12466888999998888
Q ss_pred HHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChh-
Q 012785 366 MAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDE- 442 (456)
Q Consensus 366 ~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e- 442 (456)
+.++++ .+. ++.++|+|++++. +.+++.++++++||.++||+.|...++|+||+++.+++
T Consensus 268 ~~l~~~---~~~--------------~~~~~f~~~~~~~~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~ 330 (346)
T TIGR03576 268 RLFDKL---NVE--------------RTPTGFVIKGVEEEKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAE 330 (346)
T ss_pred HHHHhC---CCC--------------cCCCeEEEEeCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHH
Confidence 888742 222 2334489999864 35788899999999999999885447899999976554
Q ss_pred --HHHHHHHHHHhhhC
Q 012785 443 --NYNLFVQRLSKILS 456 (456)
Q Consensus 443 --~i~~~l~~L~~~l~ 456 (456)
+++.+++.|++-++
T Consensus 331 ~~~~~~~~~al~~~~~ 346 (346)
T TIGR03576 331 RIGDDYLVEAVKDSLK 346 (346)
T ss_pred hcCHHHHHHHHHhccC
Confidence 79999999988664
No 110
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.97 E-value=7.2e-29 Score=252.23 Aligned_cols=316 Identities=10% Similarity=0.086 Sum_probs=231.6
Q ss_pred hcCCCCeEEecCCCC--CCCchhH---hhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCc
Q 012785 90 QDGGERIINVDHGDP--TMYEKYW---QKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENH 164 (456)
Q Consensus 90 ~~~~~~~i~l~~g~p--~~~~~~~---~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~ 164 (456)
+..+.++|+|+.|+| |+.++.. +.++.. .++..+ ...|++..| .++||++++++++. +
T Consensus 32 ~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~-~a~~~g---~~~Y~~~~g-----~~~Lreaia~~~~~--------~ 94 (460)
T PRK13238 32 AEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQW-AAMMRG---DEAYAGSRS-----YYRLEDAVKDIFGY--------P 94 (460)
T ss_pred HHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHH-HHHHhC---CcccCCCCC-----HHHHHHHHHHHhCC--------C
Confidence 457889999999999 7887652 222211 222233 246999889 49999999999963 4
Q ss_pred eEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC----------------cccccc-
Q 012785 165 HIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD----------------AKRFNK- 227 (456)
Q Consensus 165 ~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d----------------~~~l~~- 227 (456)
+|++|+|+++++.+++.+++++|| |++++|.|+.|...+...|++++.++.+ .+.++.
T Consensus 95 ~vv~t~ggt~A~~~~~~all~pGD-----Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~ 169 (460)
T PRK13238 95 YTIPTHQGRAAEQILFPVLIKKGD-----VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEAL 169 (460)
T ss_pred cEEECCCHHHHHHHHHHHhCCCCC-----EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHH
Confidence 799999999999999999999997 8899999999999999999998865543 333322
Q ss_pred ------CCCeEEEEcCCCCCCc-ccch--------HHhhhcCcEEEeeecCCCC----------CCCCCCCCCCCcEEEe
Q 012785 228 ------DGPYIELVTSPNNPDG-SVRQ--------SVVNRSGGILVHDLAYYWP----------QYTSITYPADHDLMLF 282 (456)
Q Consensus 228 ------~~~~~i~v~~P~NPtG-~~~~--------~l~~~~~~~iI~De~y~~~----------~~~~~~~~~~~~i~i~ 282 (456)
.++++|++++|||||| .+++ ++|+++|+++|+|+++... ++... ...+-++.++
T Consensus 170 i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~-si~~i~~~~~ 248 (460)
T PRK13238 170 IEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDK-SIKEIAREMF 248 (460)
T ss_pred HhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCC-CHHHHhhhhc
Confidence 2578999999999998 7766 3799999999999977421 11111 1111234457
Q ss_pred cCccccCCCCceE-----E-EEEEeCHHHHHHHHHHH----hhccCcC-ChHHHHHHHHHHHhhhCCCCCCCCcchhHHH
Q 012785 283 TVSKSTGHAGTRI-----G-WALVKDMEVAKKMTKYI----ELNTIGV-SKDSQLRAAKVLKVVSDSCKPSGSEDECFFE 351 (456)
Q Consensus 283 S~SK~~g~~G~Ri-----G-~l~~~~~~~~~~l~~~~----~~~~~~~-s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~ 351 (456)
|++|.+.++|+|+ | |+++++++++++++... ...+++. +...|.+++..|....+ +++++
T Consensus 249 s~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~---------~~~~~ 319 (460)
T PRK13238 249 SYADGLTMSAKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMD---------EDYLA 319 (460)
T ss_pred ccCcEEEEecccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhC---------hHHHH
Confidence 7888887778776 3 55555578888887773 3335555 44448887777763211 23333
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-----------cHHHHHHHHHhCCEEe
Q 012785 352 FTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-----------EIEDCESFLKGNKILT 420 (456)
Q Consensus 352 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-----------~~~~~~~~l~~~gI~v 420 (456)
.. .+++++|.+.|.+.+ +.+..|.|++ |+++++.. +...+.+++++.||.+
T Consensus 320 ~~----~~~~~~l~~~L~~~G-~~~~~p~Gg~-------------~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~ 381 (460)
T PRK13238 320 YR----IGQVEYLGEGLEEAG-VPIQTPAGGH-------------AVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRG 381 (460)
T ss_pred HH----HHHHHHHHHHHHHCC-CCeEccCCce-------------EEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeee
Confidence 33 335789999998874 7888899998 78887642 3567889999999999
Q ss_pred ecCCCCCC------C------CCeEEEEecC---ChhHHHHHHHHHHhhh
Q 012785 421 RSGKHFGF------S------PKYVRISMLD---RDENYNLFVQRLSKIL 455 (456)
Q Consensus 421 ~pg~~fg~------~------~~~iRis~~~---~~e~i~~~l~~L~~~l 455 (456)
.|++.|.. + .+.+|+++.. +.+.++.+.++|+++.
T Consensus 382 ~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~ 431 (460)
T PRK13238 382 VEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVK 431 (460)
T ss_pred ecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHH
Confidence 99998842 1 4789999997 9999999999998864
No 111
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=2e-28 Score=217.95 Aligned_cols=312 Identities=19% Similarity=0.242 Sum_probs=232.2
Q ss_pred cCCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEcc
Q 012785 91 DGGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGT 170 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~ 170 (456)
.-|++++.++..+.+..++|...+ + ...|++++. .+++.+++.- .+. .+++|+++.
T Consensus 38 a~G~~iv~ld~~e~~ryPdP~q~e------f------k~~~~d~rn------k~ls~a~~~d-----kpL-t~dnic~Gv 93 (375)
T KOG0633|consen 38 ALGRDIVKLDANENPRYPDPEQME------F------KYVYPDPRN------KRLSDALAQD-----KPL-TSDNICVGV 93 (375)
T ss_pred hcCCCceEeccccCCCCcCHHHcc------c------ccccCCccc------chhhhhcccC-----CCC-CccceEEec
Confidence 345677888766544333321111 1 124666663 6666665543 222 368999999
Q ss_pred CHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc------Ccccc----ccC-CCeEEEEcCCC
Q 012785 171 GSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG------DAKRF----NKD-GPYIELVTSPN 239 (456)
Q Consensus 171 G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~------d~~~l----~~~-~~~~i~v~~P~ 239 (456)
|+.|.|.+++++.+.||.. +|+...|+|..|.-.+...+++++.++. +.+++ +.+ ++|++++++|+
T Consensus 94 GsDE~ID~iiR~~c~PGke---KIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSPg 170 (375)
T KOG0633|consen 94 GSDELIDLIIRCVCDPGKE---KILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSPG 170 (375)
T ss_pred CcHHHHHHHHhheecCCcc---ceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCCC
Confidence 9999999999999999932 9999999999999999999999986554 33333 233 68999999999
Q ss_pred CCCcccchH-----Hhhh-cCcEEEeeecCCCCCC----CCCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHH
Q 012785 240 NPDGSVRQS-----VVNR-SGGILVHDLAYYWPQY----TSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKM 309 (456)
Q Consensus 240 NPtG~~~~~-----l~~~-~~~~iI~De~y~~~~~----~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l 309 (456)
||||..++. +++. -|.++++||+|-+++- .++...++|.+++.||||.||++|+|+||-..+ ..+++-+
T Consensus 171 NPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~-~~ia~il 249 (375)
T KOG0633|consen 171 NPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFP-LSIAEIL 249 (375)
T ss_pred CCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhcCcceeEeeccccc-HHHHHHH
Confidence 999999884 4444 4789999999986432 334467899999999999999999999999997 8899888
Q ss_pred HHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccc
Q 012785 310 TKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGR 389 (456)
Q Consensus 310 ~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~ 389 (456)
...+. ++++|.....+|.++|. +.. -+.++..++.+.+.|.++...|.+.+++.- .
T Consensus 250 n~~Ka--PYNiS~~~s~~AL~Als---~~n-------~kkme~~rdaiv~er~RL~keLt~v~~~~~--~---------- 305 (375)
T KOG0633|consen 250 NRAKA--PYNISVAGSVAALAALS---DSN-------GKKMEDVRDAIVRERERLFKELTEVPFLND--Y---------- 305 (375)
T ss_pred HhccC--CccccchhHHHHHHhcC---ccc-------chHHHHHHHHHHHHHHHHHHHhhcCccccC--C----------
Confidence 88876 88999999999998887 321 357888899999999999999988764321 1
Q ss_pred cCCCCCceEEeecCc-----cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 390 AFEPQPAFAWLKCEQ-----EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 390 ~~~~~~~f~~~~~~~-----~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
+.+..+||+.+++.+ ......+.+.++||.||--..-....+++||++ +++|+...+++.|++++
T Consensus 306 ~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitv-Gt~EentvL~k~~K~~l 375 (375)
T KOG0633|consen 306 PGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITV-GTPEENTVLMKCLKQFL 375 (375)
T ss_pred CCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEc-CCcccchHHHHHHHhhC
Confidence 223466799998753 234456677789999985221111478999998 67777889999998864
No 112
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.96 E-value=1.4e-26 Score=230.50 Aligned_cols=317 Identities=13% Similarity=0.091 Sum_probs=218.1
Q ss_pred cCCCCeEEecCCCCCC-CchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEc
Q 012785 91 DGGERIINVDHGDPTM-YEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVG 169 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~~-~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t 169 (456)
..++.+|||+.|+|.. +.++.+.+... ..+..-......|....|. .....+++++++++++. ++.|+++
T Consensus 13 ~~g~~~id~~~~~~~g~~~~~~v~~a~~-~~~~~~~~~~~~~~~~~g~-~~~~~~l~~~la~~~~~-------~~~i~~~ 83 (360)
T TIGR00858 13 RDGRRLLNFSSNDYLGLASHPEVIQAAQ-QGAEQYGAGSTASRLVSGN-SPLHEELEEELAEWKGT-------EAALLFS 83 (360)
T ss_pred ECCceEEecccCCcccCCCCHHHHHHHH-HHHHhcCCCCCCcCcccCC-cHHHHHHHHHHHHHhCC-------CCEEEEC
Confidence 3567899999997643 34444544322 2222101111112111220 00035688888888752 4689999
Q ss_pred cCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc-Ccccccc-------CCCeEEEEcCCCCC
Q 012785 170 TGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG-DAKRFNK-------DGPYIELVTSPNNP 241 (456)
Q Consensus 170 ~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-d~~~l~~-------~~~~~i~v~~P~NP 241 (456)
+|+++.+ .++.+++++|| +|++++|+|+.+...++..|.+++.++. |.+.++. .+++++++++++||
T Consensus 84 ~G~~~~~-~~l~~~~~~gd----~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~ 158 (360)
T TIGR00858 84 SGYLANV-GVISALVGKGD----LILSDALNHASLIDGCRLSGARVRRYRHNDVEHLERLLEKNRGERRKLIVTDGVFSM 158 (360)
T ss_pred chHHHHH-HHHHHhCCCCC----EEEEEccccHHHHHHHHhcCCceEEecCCCHHHHHHHHHHcccCCCeEEEEeCCccC
Confidence 9875555 56788889999 9999999999999999999998876653 5555432 14678888999999
Q ss_pred Ccccch-----HHhhhcCcEEEeeecCCCCCC----CC---CC--CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHH
Q 012785 242 DGSVRQ-----SVVNRSGGILVHDLAYYWPQY----TS---IT--YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAK 307 (456)
Q Consensus 242 tG~~~~-----~l~~~~~~~iI~De~y~~~~~----~~---~~--~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~ 307 (456)
||...+ ++|+++++++|+||+|....+ .+ .. ...+++|+++||||.+|++| ||++++ +++++
T Consensus 159 ~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~-~~~~~ 234 (360)
T TIGR00858 159 DGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGS-QALID 234 (360)
T ss_pred CCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcC-HHHHH
Confidence 998755 389999999999999974211 11 11 12467999999999999777 999986 88888
Q ss_pred HHHHHHhhc--cCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccc
Q 012785 308 KMTKYIELN--TIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCT 385 (456)
Q Consensus 308 ~l~~~~~~~--~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~ 385 (456)
.+....... +.+.++..+.++.+.++.. +..+..+++++++++.+.+.|++++ +.+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~------------~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~------- 294 (360)
T TIGR00858 235 YLINRARTLIFSTALPPAVAAAALAALELI------------QEEPWRREKLLALIARLRAGLEALG-FTLMP------- 294 (360)
T ss_pred HHHHhCccceecCCCCHHHHHHHHHHHHHH------------hhCHHHHHHHHHHHHHHHHHHHHcC-CccCC-------
Confidence 886543322 2335555555666666531 1234678899999999999998865 33332
Q ss_pred cccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCCC--CCCeEEEEecC--ChhHHHHHHHHHH
Q 012785 386 FLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFGF--SPKYVRISMLD--RDENYNLFVQRLS 452 (456)
Q Consensus 386 ~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg~--~~~~iRis~~~--~~e~i~~~l~~L~ 452 (456)
+.++|+|+.++. +...+.+.|.++||.+.++..++. +.+++||++.. +++++++++++|+
T Consensus 295 -------~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 295 -------SCTPIVPVIIGDNASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred -------CCCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 223378988864 356788888899999999776642 35699999974 8999999999874
No 113
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.95 E-value=6.1e-26 Score=229.02 Aligned_cols=318 Identities=12% Similarity=0.105 Sum_probs=217.4
Q ss_pred CCCCeEEecCCC-CCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHh-cCccCCCceEEEc
Q 012785 92 GGERIINVDHGD-PTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVV-GNAITENHHIVVG 169 (456)
Q Consensus 92 ~~~~~i~l~~g~-p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~-g~~~~~~~~I~~t 169 (456)
.++.+|||+.|+ |+++.++.+.+... ..+.........|....| .+++++++++++..+ |. +++|++|
T Consensus 40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~-~~~~~~~~~~~~~~~~~G-----~~~l~~~l~~~la~~~g~----~~~i~~t 109 (397)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAK-AALDSHGFGMASVRFICG-----TQDLHKELEEKLAKFLGT----EDAILYS 109 (397)
T ss_pred CCCeEEEeeccCccccCCCHHHHHHHH-HHHHHcCCCCcccccccC-----CcHHHHHHHHHHHHHhCC----CcEEEEc
Confidence 567899999998 67765554443322 222221111112233456 478888888877543 41 3689999
Q ss_pred cCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc-Ccccccc-------C--CCeEEEEcCCC
Q 012785 170 TGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG-DAKRFNK-------D--GPYIELVTSPN 239 (456)
Q Consensus 170 ~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-d~~~l~~-------~--~~~~i~v~~P~ 239 (456)
+| ++++..++.+++++|| .|++++|+|+.+...++..|.+++.++. |.+.++. . +++++++.+.+
T Consensus 110 sG-~~a~~~~~~~l~~~gd----~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~ 184 (397)
T PRK06939 110 SC-FDANGGLFETLLGKED----AIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEAKEAGARHKLIATDGVF 184 (397)
T ss_pred Ch-HHHHHHHHHHhCCCCC----EEEEEhhhhHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhccCCCCeEEEEecCc
Confidence 98 6788899999999999 9999999999999999999998877653 4444321 2 56777777779
Q ss_pred CCCcccch-----HHhhhcCcEEEeeecCCC--CCCC-----CCCC-CCCCcEEEecCccccCCCCceEEEEEEeCHHHH
Q 012785 240 NPDGSVRQ-----SVVNRSGGILVHDLAYYW--PQYT-----SITY-PADHDLMLFTVSKSTGHAGTRIGWALVKDMEVA 306 (456)
Q Consensus 240 NPtG~~~~-----~l~~~~~~~iI~De~y~~--~~~~-----~~~~-~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~ 306 (456)
||||...+ ++|+++++++|+||+|.. .... .... ..+.+++++||||.++ |.|+||++++ ++++
T Consensus 185 ~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~-~~~~ 261 (397)
T PRK06939 185 SMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGR-KEVI 261 (397)
T ss_pred CCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeC-HHHH
Confidence 99998654 389999999999999952 1111 1111 2245799999999984 4599999997 8898
Q ss_pred HHHHHHHhhccC--cCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccc
Q 012785 307 KKMTKYIELNTI--GVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFC 384 (456)
Q Consensus 307 ~~l~~~~~~~~~--~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~ 384 (456)
+.+........+ ..++..+.++.+.++.+.+ .++.+++++++++.+.+.|++.+ +....+.++
T Consensus 262 ~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~------------~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~-- 326 (397)
T PRK06939 262 DWLRQRSRPYLFSNSLAPAIVAASIKVLELLEE------------SDELRDRLWENARYFREGMTAAG-FTLGPGEHP-- 326 (397)
T ss_pred HHHHHhCccccccCCCCHHHHHHHHHHHHHHhc------------CHHHHHHHHHHHHHHHHHHHHcC-CCcCCCCCC--
Confidence 888765332222 2234445555555653211 24678889999999999998874 444434333
Q ss_pred ccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCCC---CCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 385 TFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFGF---SPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 385 ~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg~---~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
|+++.++. +.+.+.+.|.++||.+.++ .|+. +.+++|++++ .+++++++++++|++++
T Consensus 327 ------------~~~~~~~~~~~~~~~~~~L~~~gI~v~~~-~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~ 391 (397)
T PRK06939 327 ------------IIPVMLGDAKLAQEFADRLLEEGVYVIGF-SFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVG 391 (397)
T ss_pred ------------EEEEEECCHHHHHHHHHHHHHCCceEeee-CCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 34444442 3456777777789999964 4532 3578999985 38999999999999875
No 114
>PRK07049 methionine gamma-lyase; Validated
Probab=99.95 E-value=6.5e-26 Score=229.09 Aligned_cols=289 Identities=13% Similarity=0.144 Sum_probs=201.7
Q ss_pred ccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhh
Q 012785 129 SYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSIT 208 (456)
Q Consensus 129 ~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~ 208 (456)
++|+++. ...|+++||++.+. +++++++|+++++..++.+++++|| +|++++|+|+.+...+
T Consensus 78 ~R~~~Pt------~~~Le~~lA~leg~--------~~~iv~~sG~~Ai~~~l~al~~~Gd----~Vv~~~p~Y~~~~~~~ 139 (427)
T PRK07049 78 SRFNHPN------SEIVEDRLAVYEGA--------ESAALFSSGMSAIATTLLAFVRPGD----VILHSQPLYGGTETLL 139 (427)
T ss_pred cCCCCcC------HHHHHHHHHHHhCC--------CcEEEEccHHHHHHHHHHHHhCCCC----EEEEcCCCcccHHHHH
Confidence 4677776 48999999999852 4677888888999999999999999 9999999999997764
Q ss_pred ----hhcCCeEeeec--cCccccc--------cCCCeEEEEcCCCCCCcccch-----HHhhh------cCcEEEeeecC
Q 012785 209 ----DCVKSRLYKWA--GDAKRFN--------KDGPYIELVTSPNNPDGSVRQ-----SVVNR------SGGILVHDLAY 263 (456)
Q Consensus 209 ----~~~g~~~~~~~--~d~~~l~--------~~~~~~i~v~~P~NPtG~~~~-----~l~~~------~~~~iI~De~y 263 (456)
...|++++.++ .|.+.++ ..++++|++++||||||.+++ ++++. +++++|+||+|
T Consensus 140 ~~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety 219 (427)
T PRK07049 140 AKTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTL 219 (427)
T ss_pred HHHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCc
Confidence 45788877665 2333332 135799999999999999988 25655 78999999999
Q ss_pred CCCC-CCCCCCCCCCcEEEecCccccC-CCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCC
Q 012785 264 YWPQ-YTSITYPADHDLMLFTVSKSTG-HAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKP 341 (456)
Q Consensus 264 ~~~~-~~~~~~~~~~~i~i~S~SK~~g-~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~ 341 (456)
..+. ..++ ..+.+|+++||||.+| ++|+|+||++++ +++++.++..+.....+++++.|.++...|+
T Consensus 220 ~~~~~~~pl--~~g~divv~S~SK~~gG~~glr~G~vv~~-~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~-------- 288 (427)
T PRK07049 220 LGPVFQKPL--EHGADLSVYSLTKYVGGHSDLVAGAVLGR-KALIRQVRALRSAIGTQLDPHSCWMLGRSLE-------- 288 (427)
T ss_pred cccccCCcc--ccCCCEEEEcCceeecCCCCcEEEEEECC-HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCC--------
Confidence 7542 2233 3356899999999998 799999999986 8999999988776677799999998877665
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCc------ccccccccCCCCCceEEeecCccHHHHHHHHHh
Q 012785 342 SGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQ------FCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKG 415 (456)
Q Consensus 342 ~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~------~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~ 415 (456)
.+....++..++++.+.+.|++++.+.....+|. .....++.....+..+-+.++++.+.+.+.+..
T Consensus 289 -------tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~ 361 (427)
T PRK07049 289 -------TLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQAAAFRFLNA 361 (427)
T ss_pred -------hHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCHHHHHHHHHc
Confidence 2333455668899999999999875543322221 111111112223444566665444444444444
Q ss_pred CCEEe---ecCCCC----------------------CCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 416 NKILT---RSGKHF----------------------GFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 416 ~gI~v---~pg~~f----------------------g~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
-.+.. .-|... |..++.||||++. |+.+.+++.|.+.|
T Consensus 362 l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al 424 (427)
T PRK07049 362 LQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGI--EHPDDLIADLAQAL 424 (427)
T ss_pred CcccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCc--CCHHHHHHHHHHHH
Confidence 33322 222111 1124689999964 34556666666655
No 115
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.95 E-value=5.4e-26 Score=229.15 Aligned_cols=316 Identities=12% Similarity=0.098 Sum_probs=216.5
Q ss_pred CCCCeEEecCCCC-CCCchhHhhhcccccccccCccccccccCCC---CcccCCCHHHHHHHHHHHHHhcCccCCCceEE
Q 012785 92 GGERIINVDHGDP-TMYEKYWQKVGDKTTIVIPGWQSLSYFSDVR---NLCWFLEPEFAKEVVRLHKVVGNAITENHHIV 167 (456)
Q Consensus 92 ~~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~---G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~ 167 (456)
.+.++|||+.|++ .+..++.+.+... .++... ...|+... |. .....+|++++|++++. ++++
T Consensus 36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~-~~~~~~---~~~~~~s~~~~G~-~~~~~~le~~ia~~~g~--------~~~i 102 (393)
T TIGR01822 36 DGREVLNFCANNYLGLSSHPDLIQAAK-DALDEH---GFGMSSVRFICGT-QDIHKELEAKIAAFLGT--------EDTI 102 (393)
T ss_pred CCceEEEeeCCCccccCCCHHHHHHHH-HHHHHh---CCCCCCcCcccCC-hHHHHHHHHHHHHHhCC--------CcEE
Confidence 5678999999996 6665555544322 222211 01244443 40 00137899999999974 3567
Q ss_pred EccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeee-ccCcccccc-------C--CCeEEEEcC
Q 012785 168 VGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKW-AGDAKRFNK-------D--GPYIELVTS 237 (456)
Q Consensus 168 ~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~-~~d~~~l~~-------~--~~~~i~v~~ 237 (456)
+++|+++++..++.+++++|| .|++++|+|+.+...++..+.+.+.+ ..|.+.++. . ++++|++++
T Consensus 103 i~~~~~~a~~~~~~~l~~~gd----~vi~~~~~~~s~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~ 178 (393)
T TIGR01822 103 LYASCFDANGGLFETLLGAED----AIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEARAAGARHRLIATDG 178 (393)
T ss_pred EECchHHHHHHHHHHhCCCCC----EEEEeccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhhcCCCceEEEEeC
Confidence 778889999999999999999 99999999999999888887766543 245555432 1 567888888
Q ss_pred CCCCCcccch-----HHhhhcCcEEEeeecCCCC----CCCC---CCC-CCCCcEEEecCccccCCCCceEEEEEEeCHH
Q 012785 238 PNNPDGSVRQ-----SVVNRSGGILVHDLAYYWP----QYTS---ITY-PADHDLMLFTVSKSTGHAGTRIGWALVKDME 304 (456)
Q Consensus 238 P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~----~~~~---~~~-~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~ 304 (456)
++||||.+.+ ++|+++|+++|+||+|... ...+ ... ..+.+++++|+||.+ +|+|+||++++ ++
T Consensus 179 v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l--~g~r~G~~~~~-~~ 255 (393)
T TIGR01822 179 VFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKAL--GGASGGFTTAR-KE 255 (393)
T ss_pred CccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHh--hCCCcEEEEeC-HH
Confidence 9999999876 3889999999999999521 1111 111 124579999999986 46899999996 88
Q ss_pred HHHHHHHHHhhccC--cCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCc
Q 012785 305 VAKKMTKYIELNTI--GVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQ 382 (456)
Q Consensus 305 ~~~~l~~~~~~~~~--~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~ 382 (456)
+++.++.......+ +.++..+.++.+.++.+ +..++.+++++++++++.+.|++.+ +.+..+.+.
T Consensus 256 ~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~------------~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~ 322 (393)
T TIGR01822 256 VVELLRQRSRPYLFSNSLPPAVVGASIKVLEML------------EASNELRDRLWANTRYFRERMEAAG-FDIKPADHP 322 (393)
T ss_pred HHHHHHHhCccceecCCCCHHHHHHHHHHHHHH------------hcCHHHHHHHHHHHHHHHHHHHHcC-CCCCCCCCC
Confidence 99988764322222 23444445555656522 1235678889999999999998764 444322222
Q ss_pred ccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCCC---CCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 383 FCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFGF---SPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 383 ~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg~---~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
++.+.+++ ....+.+.|.++||.+. +..|.. +...+|++++. +++++++++++|++++
T Consensus 323 --------------~~~i~~~~~~~~~~l~~~L~~~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~ 387 (393)
T TIGR01822 323 --------------IIPVMLYDAVLAQRFARRLLEEGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIG 387 (393)
T ss_pred --------------EEEEEeCCHHHHHHHHHHHHHCCeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 44445432 34567777778899998 565642 33579988764 7999999999998874
No 116
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=6.8e-27 Score=220.56 Aligned_cols=325 Identities=18% Similarity=0.166 Sum_probs=232.6
Q ss_pred CCCCeEEecCCC---CCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceE--
Q 012785 92 GGERIINVDHGD---PTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHI-- 166 (456)
Q Consensus 92 ~~~~~i~l~~g~---p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I-- 166 (456)
..+..|||++|. .+..+|-......+.+.+.+.. ....|-+..| .+++++++++++-....+....++|
T Consensus 24 ~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~-~~k~Yl~i~G-----~~~f~~~~~~llFG~d~~~l~~~Rv~t 97 (396)
T COG1448 24 PRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQE-KTKNYLPIEG-----LPEFLEAVQKLLFGADSPALAEDRVAT 97 (396)
T ss_pred CCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccc-cccccCCcCC-----cHHHHHHHHHHhcCCCcHHHHhhhHhh
Confidence 445679999994 3333221111111222233222 2346888899 5999999999983222222233454
Q ss_pred EEccCHHHHHHHHHHHhcC--CCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeec--------cCcccccc------CCC
Q 012785 167 VVGTGSTQLFQAALYALSS--QDASEPISVVSAAPYYSSYPSITDCVKSRLYKWA--------GDAKRFNK------DGP 230 (456)
Q Consensus 167 ~~t~G~~~al~~~~~~l~~--~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~------~~~ 230 (456)
+-|.|+|.||.++...+.. +.. +|++++|+|+++..+++..|.++..++ +|.+++.. .+.
T Consensus 98 ~Qt~GGTGAL~~~A~fl~~~~~~~----~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~ 173 (396)
T COG1448 98 VQTLGGTGALRVAADFLARFFPDA----TVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGS 173 (396)
T ss_pred eecCCcchHHHHHHHHHHHhCCCc----eEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhCCCCC
Confidence 5799999999999988854 333 799999999999999999999997655 34444421 244
Q ss_pred eEEEEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCCC------C---CCCCCCCcEEEecCccccCCCCc
Q 012785 231 YIELVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQYT------S---ITYPADHDLMLFTVSKSTGHAGT 293 (456)
Q Consensus 231 ~~i~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~~------~---~~~~~~~~i~i~S~SK~~g~~G~ 293 (456)
.+++..++|||||..++. +.++.+.+.+.|-+|.+..-- + +.......++..||||.||+.|.
T Consensus 174 vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLYgE 253 (396)
T COG1448 174 VVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLYGE 253 (396)
T ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhh
Confidence 566778889999999983 667899999999999963211 1 11222348999999999999999
Q ss_pred eEEEEE--EeCHHHHH----HHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 012785 294 RIGWAL--VKDMEVAK----KMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMA 367 (456)
Q Consensus 294 RiG~l~--~~~~~~~~----~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 367 (456)
|+|.+. +.|.+.++ ++....+.+..+++.....+++.+|+..+-. .+|+..++.+++++.++|+.+.+.
T Consensus 254 RVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lr-----a~W~~El~~Mr~Ri~~mR~~lv~~ 328 (396)
T COG1448 254 RVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELR-----AEWEQELEEMRQRILEMRQALVDA 328 (396)
T ss_pred ccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999864 44554444 4455556667788888888889888843332 245788899999999999999999
Q ss_pred HHhcC---CccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC-ChhH
Q 012785 368 VQKSG---LFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD-RDEN 443 (456)
Q Consensus 368 L~~~~---~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~-~~e~ 443 (456)
|+..+ .++....+ .|+|.+..+ +.+++.++.+++||++.... |||++. ++.+
T Consensus 329 L~~~~~~~~f~~i~~Q-------------~GMFsy~Gl--s~~QV~rLree~~IY~v~sG---------Ri~vaGl~~~n 384 (396)
T COG1448 329 LKALGAPRNFDFIISQ-------------RGMFSYTGL--SPEQVDRLREEFGIYLVASG---------RINVAGLNTSN 384 (396)
T ss_pred HHhhCCCcccchHhhc-------------CceeecCCC--CHHHHHHHHHhccEEEecCC---------eeeeccCChhh
Confidence 99842 24444444 444877766 68899999999999998732 999988 9999
Q ss_pred HHHHHHHHHhhh
Q 012785 444 YNLFVQRLSKIL 455 (456)
Q Consensus 444 i~~~l~~L~~~l 455 (456)
++.+.+.|.+++
T Consensus 385 i~~va~ai~~v~ 396 (396)
T COG1448 385 IDYVAKAIAAVL 396 (396)
T ss_pred HHHHHHHHHhhC
Confidence 999999998764
No 117
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=1.7e-26 Score=216.41 Aligned_cols=300 Identities=20% Similarity=0.240 Sum_probs=223.3
Q ss_pred ccccccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCCh
Q 012785 127 SLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSY 204 (456)
Q Consensus 127 ~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~ 204 (456)
+...|+.++|+ +-.|+.+|+|..+ .| ...++++|++|.|++.++..++..++. +.+ .|++|.|.||.|
T Consensus 105 s~GaYS~SqGv-----~~vR~~VA~~I~rRDG-~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~----GvliPiPQYPLY 174 (475)
T KOG0258|consen 105 SLGAYSDSQGV-----PGVRKHVAEFIERRDG-IPADPEDIFLTTGASPAIRSILSLLIAGKKT----GVLIPIPQYPLY 174 (475)
T ss_pred cccccccccCC-----hhHHHHHHHHHHhccC-CCCCHHHeeecCCCcHHHHHHHHHHhcCCCC----ceEeecCCCchh
Confidence 45679999995 9999999999965 56 444578999999999999999998865 445 899999999999
Q ss_pred hhhhhhcCCeEeeeccC--------cccccc--------CCCeEEEEcCCCCCCcccchH--------HhhhcCcEEEee
Q 012785 205 PSITDCVKSRLYKWAGD--------AKRFNK--------DGPYIELVTSPNNPDGSVRQS--------VVNRSGGILVHD 260 (456)
Q Consensus 205 ~~~~~~~g~~~~~~~~d--------~~~l~~--------~~~~~i~v~~P~NPtG~~~~~--------l~~~~~~~iI~D 260 (456)
...+..+|...+++-+| .+.++. -+++++++.||.||||.++++ +|.++++.++.|
T Consensus 175 sAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaD 254 (475)
T KOG0258|consen 175 SATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLAD 254 (475)
T ss_pred HHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEech
Confidence 99999999998865554 444432 167889999999999999995 688999999999
Q ss_pred ecCCCCCCC------CCC-------C-CCCC--cEEEecCcccc-CCCCceEEEEEEe--CHHHHHHHHHHHhhccCcCC
Q 012785 261 LAYYWPQYT------SIT-------Y-PADH--DLMLFTVSKST-GHAGTRIGWALVK--DMEVAKKMTKYIELNTIGVS 321 (456)
Q Consensus 261 e~y~~~~~~------~~~-------~-~~~~--~i~i~S~SK~~-g~~G~RiG~l~~~--~~~~~~~l~~~~~~~~~~~s 321 (456)
|+|.+.-|. ++. . ..++ .+.++|.||.+ |=.|-|-||+-+- ++++.+.+.+... ...+.+
T Consensus 255 EVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~s-i~lc~~ 333 (475)
T KOG0258|consen 255 EVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLAS-IKLCPQ 333 (475)
T ss_pred HHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHh-hhhcCC
Confidence 999863222 211 1 1223 56689999987 5678999997543 4677777776654 356666
Q ss_pred hHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEee
Q 012785 322 KDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLK 401 (456)
Q Consensus 322 ~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~ 401 (456)
.-.|..+-.+......+. .++..+....+.+...+++|.+.+.+.++..+++++.+++|.| |++.+
T Consensus 334 V~GQ~~vdl~VnPP~Pgd-~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAM-------------Y~fP~ 399 (475)
T KOG0258|consen 334 VSGQKLVDLVVNPPKPGD-PSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAM-------------YLFPQ 399 (475)
T ss_pred ccchhhhceecCCCCCCC-cchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccce-------------eeccc
Confidence 667777666555322221 1112233445567788999999999999999999999999999 55554
Q ss_pred c--C-------------ccHHHHHHHHHhCCEEeecCCCCCC--CCCeEEEEecCChhHHHHHHHHHHhh
Q 012785 402 C--E-------------QEIEDCESFLKGNKILTRSGKHFGF--SPKYVRISMLDRDENYNLFVQRLSKI 454 (456)
Q Consensus 402 ~--~-------------~~~~~~~~~l~~~gI~v~pg~~fg~--~~~~iRis~~~~~e~i~~~l~~L~~~ 454 (456)
+ | .+.-.|.++|+..||+++||+.||. +.-++|.++-... + +.+++++++
T Consensus 400 i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~~~f 466 (475)
T KOG0258|consen 400 ISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKFKKF 466 (475)
T ss_pred ccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHHHHH
Confidence 4 3 1334477899999999999999996 4558999984422 4 666666654
No 118
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.95 E-value=2.8e-25 Score=223.31 Aligned_cols=318 Identities=13% Similarity=0.098 Sum_probs=220.7
Q ss_pred CCCCeEEecCCC-CCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEcc
Q 012785 92 GGERIINVDHGD-PTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGT 170 (456)
Q Consensus 92 ~~~~~i~l~~g~-p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~ 170 (456)
.++.+|||+.++ +.+..++.+.+... ..+.........|....| .+++++++++++...-. .++.|++++
T Consensus 31 ~g~~~id~~~~~~~g~~~~~~~~~a~~-~~~~~~~~~~~~~~~~~g-----~~~l~~~l~~~l~~~~g---~~~~i~~~s 101 (385)
T TIGR01825 31 NGKEVINLSSNNYLGFADHPRLKEAAA-QAIQQYGVGAGAVRTIAG-----TLRLHEELEEKLAKFKK---TEAALVFQS 101 (385)
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHH-HHHHHcCCCCCccCcccC-----CcHHHHHHHHHHHHHhC---CCcEEEECc
Confidence 457889999887 67755554544322 222221111234666778 58999999999865322 135788888
Q ss_pred CHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeec-cCcccccc-------CCCeEEEEcCCCCCC
Q 012785 171 GSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWA-GDAKRFNK-------DGPYIELVTSPNNPD 242 (456)
Q Consensus 171 G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~-~d~~~l~~-------~~~~~i~v~~P~NPt 242 (456)
|+ +++..++.+++++|| .|+++.|+|+.+...+...|.++..++ .|.+.++. .+++++++++++|||
T Consensus 102 G~-~a~~~a~~~~~~~gd----~vi~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~t 176 (385)
T TIGR01825 102 GF-NTNQGVLSALLRKGD----IVLSDELNHASIIDGLRLTKATKKIYKHADMDDLDRVLRENPSYGKKLIVTDGVFSMD 176 (385)
T ss_pred HH-HHHHHHHHHhCCCCC----EEEEEccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhccCCCeEEEEecCCcCC
Confidence 85 566678888999999 999999999999888888888876654 45544432 257888888889999
Q ss_pred cccch-----HHhhhcCcEEEeeecCCCCCCC--------CCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHH
Q 012785 243 GSVRQ-----SVVNRSGGILVHDLAYYWPQYT--------SITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKM 309 (456)
Q Consensus 243 G~~~~-----~l~~~~~~~iI~De~y~~~~~~--------~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l 309 (456)
|.+.+ ++|+++|+++|+||+|....+. .+....+++++++||||.+|++| ||++++ +++++.+
T Consensus 177 G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~-~~~~~~~ 252 (385)
T TIGR01825 177 GDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGH-KELIEYL 252 (385)
T ss_pred CCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecC-HHHHHHH
Confidence 99876 4899999999999999642111 11122578999999999998766 999986 8888888
Q ss_pred HHHHh-hc-cCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccc
Q 012785 310 TKYIE-LN-TIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFL 387 (456)
Q Consensus 310 ~~~~~-~~-~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~ 387 (456)
..... .. ....++..|.++.+.++.+.+. .+..++++++++++.+.|++.+ +.+..+.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~------------~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~------ 313 (385)
T TIGR01825 253 KNRARPFLFSTAQPPAVVAALAAAVDELQRS------------PELMERLWDNTRFFKAGLGKLG-YDTGGSET------ 313 (385)
T ss_pred HHhCccccccCCCCHHHHHHHHHHHHHHhcC------------HHHHHHHHHHHHHHHHHHHHcC-CCCCCCCC------
Confidence 76532 21 2234567777877877632221 1356667788899999998764 44433332
Q ss_pred cccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCCC---CCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 388 GRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFGF---SPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 388 ~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg~---~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
+++++.++. +.+.+.+.|.++||.++ +..|+. +.+++|+++. .++|++++++++|++++
T Consensus 314 --------~~~~~~~~~~~~~~~~~~~L~~~gi~v~-~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~ 379 (385)
T TIGR01825 314 --------PITPVVIGDEKAAQEFSRRLFDEGIFAQ-SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVG 379 (385)
T ss_pred --------CEEEEEECCHHHHHHHHHHHHHCCcEEc-ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 244444532 34567777777799985 455542 4578999864 49999999999999875
No 119
>PLN02822 serine palmitoyltransferase
Probab=99.95 E-value=1.5e-25 Score=229.84 Aligned_cols=317 Identities=10% Similarity=0.081 Sum_probs=226.6
Q ss_pred CCCCeEEecCCCC-CCCchhHhhhccccccccc-Cccc---cccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceE
Q 012785 92 GGERIINVDHGDP-TMYEKYWQKVGDKTTIVIP-GWQS---LSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHI 166 (456)
Q Consensus 92 ~~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~-~~~~---~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I 166 (456)
.++.+|||+.+++ .+..++.+.++.. ..+.. +... -..|++..+ ..+|+++|+++++. ++.|
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~-~al~~~G~g~~g~r~~yg~~~~-----~~~Lee~La~~~~~-------~~~i 173 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCT-SALEKYGVGSCGPRGFYGTIDV-----HLDCETKIAKFLGT-------PDSI 173 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHH-HHHHHhCCCCcccCccccCHHH-----HHHHHHHHHHHhCC-------CCEE
Confidence 5678999998865 5656666655432 22322 2110 113555555 58999999999973 4689
Q ss_pred EEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc-Cccccc-------c-----CCC-eE
Q 012785 167 VVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG-DAKRFN-------K-----DGP-YI 232 (456)
Q Consensus 167 ~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-d~~~l~-------~-----~~~-~~ 232 (456)
++++|.+ ++..++.+++++|| .|+++...+..+...+...|.+++.++. |.+.++ . .++ ++
T Consensus 174 ~~s~G~~-a~~sai~a~~~~gd----~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~ 248 (481)
T PLN02822 174 LYSYGLS-TIFSVIPAFCKKGD----IIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRY 248 (481)
T ss_pred EECCHHH-HHHHHHHHhCCCCC----EEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEE
Confidence 9999887 57889999999999 8887766666666677788888887764 333332 1 123 68
Q ss_pred EEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCC--C--CCCCC---C--CCCCcEEEecCccccCCCCceEEEE
Q 012785 233 ELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWP--Q--YTSIT---Y--PADHDLMLFTVSKSTGHAGTRIGWA 298 (456)
Q Consensus 233 i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~--~--~~~~~---~--~~~~~i~i~S~SK~~g~~G~RiG~l 298 (456)
|+++.++|+||.+.+ ++|++|++++|+||+|... + ..+.. . ..+.+|+++||||++|.+| ||+
T Consensus 249 Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i 325 (481)
T PLN02822 249 IVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFC 325 (481)
T ss_pred EEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEE
Confidence 888889999999988 4899999999999999831 1 11111 1 1356799999999999888 999
Q ss_pred EEeCHHHHHHHHHHHhhccCcCC--hHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q 012785 299 LVKDMEVAKKMTKYIELNTIGVS--KDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSV 376 (456)
Q Consensus 299 ~~~~~~~~~~l~~~~~~~~~~~s--~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~ 376 (456)
+++ +++++.++......+++.+ +..|.++.++|+.+. + ....+++++++++++.+.|++..++.+
T Consensus 326 ~g~-~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~-----------~-~~~~~~~l~~~~~~l~~~L~~~~g~~~ 392 (481)
T PLN02822 326 TGS-ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE-----------D-NPSVLAKLKENIALLHKGLSDIPGLSI 392 (481)
T ss_pred EcC-HHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHH-----------h-CHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 996 8999988766555566554 777888888887421 1 246788899999999999998755666
Q ss_pred cCCCCcccccccccCCCCCceEEeecCcc----------HHHHHHHH-HhCCEEeecC--CCCCC--CCCeEEEEec--C
Q 012785 377 PELPSQFCTFLGRAFEPQPAFAWLKCEQE----------IEDCESFL-KGNKILTRSG--KHFGF--SPKYVRISML--D 439 (456)
Q Consensus 377 ~~~~g~~~~~~~~~~~~~~~f~~~~~~~~----------~~~~~~~l-~~~gI~v~pg--~~fg~--~~~~iRis~~--~ 439 (456)
..+.++. ++++.+++. ...+.+.| .++||.+.|+ ..|+. .+.++|++++ .
T Consensus 393 ~~~~~sp-------------i~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~ 459 (481)
T PLN02822 393 GSNTLSP-------------IVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGH 459 (481)
T ss_pred CCCCCCC-------------EEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCC
Confidence 5555554 677777421 13455555 5899999976 44542 3468999876 4
Q ss_pred ChhHHHHHHHHHHhhh
Q 012785 440 RDENYNLFVQRLSKIL 455 (456)
Q Consensus 440 ~~e~i~~~l~~L~~~l 455 (456)
++++|++++++|++++
T Consensus 460 t~edI~~~~~~l~~~~ 475 (481)
T PLN02822 460 TESDILKASESLKRVA 475 (481)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999998875
No 120
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.95 E-value=4e-26 Score=230.38 Aligned_cols=279 Identities=15% Similarity=0.089 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCC---CCcEEEEeCCCCCChhhhhhhcCCeE----
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDAS---EPISVVSAAPYYSSYPSITDCVKSRL---- 215 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~---~~~~Vlv~~P~y~~~~~~~~~~g~~~---- 215 (456)
.++++++++++.... ..+++++|+|+++++.++++++...++. +..+|++.+++|+++.......+...
T Consensus 80 ~~~~~~la~~l~~~~----~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 155 (396)
T PRK02627 80 IEPQEELAEKLVELS----GMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQE 155 (396)
T ss_pred CHHHHHHHHHHHhhc----CCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccc
Confidence 466677777764321 2369999999999999999987654421 00189999999998876655543211
Q ss_pred ---------eee-ccCcccccc---CCCeEEEEcCCCCCCc-ccch--------HHhhhcCcEEEeeecCCCCCCCCC--
Q 012785 216 ---------YKW-AGDAKRFNK---DGPYIELVTSPNNPDG-SVRQ--------SVVNRSGGILVHDLAYYWPQYTSI-- 271 (456)
Q Consensus 216 ---------~~~-~~d~~~l~~---~~~~~i~v~~P~NPtG-~~~~--------~l~~~~~~~iI~De~y~~~~~~~~-- 271 (456)
..+ ..|.+.++. .+++++++++++||+| .+++ ++|+++++++|+||+|.+..+.+.
T Consensus 156 ~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~ 235 (396)
T PRK02627 156 GFEPLVEGFIYVPFNDIEALKAAITDKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLF 235 (396)
T ss_pred cCCCCCCCceEeCCCCHHHHHHhcCCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCcee
Confidence 001 114555543 3678999988899999 4554 289999999999999986433321
Q ss_pred C-CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHH
Q 012785 272 T-YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFF 350 (456)
Q Consensus 272 ~-~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l 350 (456)
. ...+-.--+.||||.++ +|+|+||++++ +++++.+.......+++.+++.|.++.++|+.+.+ +++.
T Consensus 236 ~~~~~~~~pdi~t~sK~~~-~G~rig~~~~~-~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~---------~~~~ 304 (396)
T PRK02627 236 AYQHYGIEPDIMTLAKGLG-GGVPIGAVLAK-EKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEE---------EGLL 304 (396)
T ss_pred eehhcCCCCCEEEEcchhh-CCcccEEEEEc-HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhh---------ccHH
Confidence 1 11111111457999999 99999999997 88888887655567889999999999999985432 2344
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCC
Q 012785 351 EFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSP 430 (456)
Q Consensus 351 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~ 430 (456)
++.++..+..++.+.+.+.+.+.+...++ .++|+|++++.+...+.+.+.++||.+.|+. .
T Consensus 305 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--------------~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~-----~ 365 (396)
T PRK02627 305 ENAAEVGEYLRAKLRELLEKYPGIKEVRG--------------LGLMIGIELDRPAAEIVKKALEKGLLINVTG-----D 365 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeeecc--------------CcEEEEEEecCcHHHHHHHHHHCCeEEeecC-----C
Confidence 44444444444444444443332222222 2337899885556677777778899999953 5
Q ss_pred CeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 431 KYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 431 ~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
+++|++++ .+++++++++++|++++
T Consensus 366 ~~lRi~~~~~~~~~~i~~~~~~l~~~l 392 (396)
T PRK02627 366 NVLRLLPPLIISKEEIDEAVDRLEEVL 392 (396)
T ss_pred CEEEEECCcccCHHHHHHHHHHHHHHH
Confidence 78999864 48999999999998876
No 121
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.94 E-value=9.2e-26 Score=227.06 Aligned_cols=264 Identities=16% Similarity=0.124 Sum_probs=181.2
Q ss_pred CceEEEccCHHHHHHHHHHHhc----CCCCCCCcEEEEeCCCCCChhhhhhhcCCeEe-------------eec-cCccc
Q 012785 163 NHHIVVGTGSTQLFQAALYALS----SQDASEPISVVSAAPYYSSYPSITDCVKSRLY-------------KWA-GDAKR 224 (456)
Q Consensus 163 ~~~I~~t~G~~~al~~~~~~l~----~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~-------------~~~-~d~~~ 224 (456)
.+++++++|+++|++.+++++. .+||..+.+|++.+++|+++...+...+.... .++ .|.+.
T Consensus 88 ~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 167 (389)
T PRK01278 88 ADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEA 167 (389)
T ss_pred CCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHH
Confidence 3689999999999999998873 34543233899999999999877765543211 111 25555
Q ss_pred ccc---CCCeEEEEcCCCCCCc-ccch--------HHhhhcCcEEEeeecCCCCCCCCC--C-CCCCCcEEEecCccccC
Q 012785 225 FNK---DGPYIELVTSPNNPDG-SVRQ--------SVVNRSGGILVHDLAYYWPQYTSI--T-YPADHDLMLFTVSKSTG 289 (456)
Q Consensus 225 l~~---~~~~~i~v~~P~NPtG-~~~~--------~l~~~~~~~iI~De~y~~~~~~~~--~-~~~~~~i~i~S~SK~~g 289 (456)
++. .++++|+++.+|||+| .+++ ++|+++|+++|+||+|.+..+.+- . ...+-..-+.||||.++
T Consensus 168 l~~~l~~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~ 247 (389)
T PRK01278 168 LKAAITPNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAKGIG 247 (389)
T ss_pred HHHhhCCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEEEehhcc
Confidence 543 3678888887788888 4555 389999999999999996543321 1 01111111568999999
Q ss_pred CCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 012785 290 HAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQ 369 (456)
Q Consensus 290 ~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~ 369 (456)
+|+|+||++++ +++++.+.......+++.+++.|.++.+.|+.+.+. ...++++++.+.++++.+.+ .+
T Consensus 248 -~G~~ig~~~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~------~~~~~~~~~~~~l~~~l~~l---~~ 316 (389)
T PRK01278 248 -GGFPLGACLAT-EEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAP------GFLDNVQRMGLYLKQKLEGL---VD 316 (389)
T ss_pred -CCcceEEEEEc-HHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhh------HHHHHHHHHHHHHHHHHHHH---Hh
Confidence 99999999997 888888877666678899999999999988855332 01233444444444443332 22
Q ss_pred hcC-CccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEec--CChhHHHH
Q 012785 370 KSG-LFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISML--DRDENYNL 446 (456)
Q Consensus 370 ~~~-~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~--~~~e~i~~ 446 (456)
..+ .+...++.| .++|++++.+...+.+.|.++||.+.|+. .+++||+++ .+++++++
T Consensus 317 ~~~~~~~~v~g~G--------------~~~~i~~~~~~~~~~~~l~~~GV~~~p~~-----~~~lR~~p~~~~~~~~i~~ 377 (389)
T PRK01278 317 RFPDVIEEVRGKG--------------LLLGLKCVVPNRDLVQALRDEGLLTVGAG-----DNVVRLLPPLIITEEEIDE 377 (389)
T ss_pred hCCCceeeEeccc--------------EEEEEEEecCHHHHHHHHHHCCeEEeecC-----CCEEEEeCCcccCHHHHHH
Confidence 222 222223322 26788775456667777778899999963 689999954 48999999
Q ss_pred HHHHHHhhhC
Q 012785 447 FVQRLSKILS 456 (456)
Q Consensus 447 ~l~~L~~~l~ 456 (456)
++++|+++++
T Consensus 378 ~l~~l~~~l~ 387 (389)
T PRK01278 378 ALERLERAAE 387 (389)
T ss_pred HHHHHHHHHH
Confidence 9999998763
No 122
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.94 E-value=3.5e-25 Score=223.56 Aligned_cols=278 Identities=14% Similarity=0.144 Sum_probs=199.8
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHh----cCCCCCCCcEEEEeCCCCCC----hhhhhhhcCCe
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYAL----SSQDASEPISVVSAAPYYSS----YPSITDCVKSR 214 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l----~~~gd~~~~~Vlv~~P~y~~----~~~~~~~~g~~ 214 (456)
.++|++++++++. .++++|++|+|+++++++++.++ .++|| +|++++|.|+. +...++..|++
T Consensus 63 ~~~r~~la~~~g~-----~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd----~Vl~~~~~~~s~~~~~~~~~~~~g~~ 133 (398)
T TIGR03392 63 ELARQQVARFLNA-----PDAENIVWTRGTTESINLVAQSYARPRLQPGD----EIIVSEAEHHANLIPWLMVAQQTGAK 133 (398)
T ss_pred HHHHHHHHHHhCC-----CCCCeEEEeCChHHHHHHHHHHhhhccCCCCC----EEEECCcchhHHHHHHHHHHHHcCcE
Confidence 5788999998864 13578999999999999999988 46888 99999999876 44566788999
Q ss_pred EeeeccCc------ccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEE
Q 012785 215 LYKWAGDA------KRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLM 280 (456)
Q Consensus 215 ~~~~~~d~------~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~ 280 (456)
++.++.|. +.++. .+++++++++||||||.+++ ++|+++|+++|+|++|.......-....+-+++
T Consensus 134 v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~ 213 (398)
T TIGR03392 134 VVKLPIGADLLPDIRQLPELLTPRTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFY 213 (398)
T ss_pred EEEEecCCCCCcCHHHHHHHhccCceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEE
Confidence 88776643 33322 36799999999999999987 378999999999999974333211122345788
Q ss_pred EecCccccCCCCceEEEEEEeCHHHHHHHHHHH---------------------hhccCcCChHHHHHHHHHHHhhhCCC
Q 012785 281 LFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYI---------------------ELNTIGVSKDSQLRAAKVLKVVSDSC 339 (456)
Q Consensus 281 i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~---------------------~~~~~~~s~~~q~~a~~~L~~~~~~~ 339 (456)
++|++|.+|.+| +||++++ +++++++.... .......+.....++.++++.+.+.
T Consensus 214 ~~s~~K~~gp~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~- 289 (398)
T TIGR03392 214 AFSGHKLYGPTG--IGVLYGK-TELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDI- 289 (398)
T ss_pred EEecccccCCCc--eEEEEEc-HHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHh-
Confidence 999999998666 8999996 88777664321 0011123334555555656543221
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhCCE
Q 012785 340 KPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGNKI 418 (456)
Q Consensus 340 ~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~gI 418 (456)
-+++.+++.++.++.+.+.|++++++.+..+... ..+++.+++ +.+.+.+.|.++||
T Consensus 290 ---------g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~-------------~i~~~~~~~~~~~~l~~~L~~~gI 347 (398)
T TIGR03392 290 ---------DIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGS-------------SLLAFDFAGVHHSDLAALLAESGI 347 (398)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCC-------------cEEEEEeCCcCHHHHHHHHHhCCE
Confidence 2345677778888888888888765554332221 145556653 45678888899999
Q ss_pred EeecCCCCCC-------CCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 419 LTRSGKHFGF-------SPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 419 ~v~pg~~fg~-------~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
.+++|..+.. .+++||+|+.. +++|++.+++.|++++
T Consensus 348 ~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~ 393 (398)
T TIGR03392 348 ALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAAL 393 (398)
T ss_pred EEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHH
Confidence 9999986631 25799999864 8999999999998875
No 123
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.94 E-value=8.1e-25 Score=221.15 Aligned_cols=279 Identities=14% Similarity=0.139 Sum_probs=201.9
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhc----CCCCCCCcEEEEeCCCCCC----hhhhhhhcCC
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALS----SQDASEPISVVSAAPYYSS----YPSITDCVKS 213 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~----~~gd~~~~~Vlv~~P~y~~----~~~~~~~~g~ 213 (456)
..++|+.++++++. .++++|++|+|+++++++++.++. ++|| +|++++|.|+. +...++..|+
T Consensus 65 ~~~~r~~la~~~g~-----~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd----~vl~~~~~~~s~~~~~~~~~~~~g~ 135 (401)
T PRK10874 65 YEAAREQVAQLLNA-----PDAKNIVWTRGTTESINLVAQSYARPRLQPGD----EIIVSEAEHHANLVPWLMVAQQTGA 135 (401)
T ss_pred HHHHHHHHHHHcCC-----CCCCEEEEECCHHHHHHHHHHHhhhccCCCcC----EEEECCcchHHHHHHHHHHHHHhCC
Confidence 36788888888863 135789999999999999999983 6888 99999999875 4556677899
Q ss_pred eEeeeccC------cccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcE
Q 012785 214 RLYKWAGD------AKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDL 279 (456)
Q Consensus 214 ~~~~~~~d------~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i 279 (456)
+++.++.+ .+.++. .+++++++++|+||||.+++ ++|+++|+++|+|++|....+..-....+.++
T Consensus 136 ~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~ 215 (401)
T PRK10874 136 KVVKLPLGADRLPDVDLLPELITPRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDF 215 (401)
T ss_pred EEEEEecCCCCcCCHHHHHHhcCcCcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhcCCCE
Confidence 98877654 333332 36799999999999999987 37899999999999997432221112234679
Q ss_pred EEecCccccCCCCceEEEEEEeCHHHHHHHHHHH---------------------hhccCcCChHHHHHHHHHHHhhhCC
Q 012785 280 MLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYI---------------------ELNTIGVSKDSQLRAAKVLKVVSDS 338 (456)
Q Consensus 280 ~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~---------------------~~~~~~~s~~~q~~a~~~L~~~~~~ 338 (456)
++.|++|.+|.+| +||++++ +++++.+.... .....+.+...+.++.++++.+.+
T Consensus 216 ~~~s~~K~~gp~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~- 291 (401)
T PRK10874 216 YAFSGHKLYGPTG--IGVLYGK-SELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLAD- 291 (401)
T ss_pred EEEecccccCCCc--cEEEEEc-hHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHH-
Confidence 9999999999777 5999996 88877664321 111123444566666666664322
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhCC
Q 012785 339 CKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGNK 417 (456)
Q Consensus 339 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~g 417 (456)
...++.+++.++.++.+.+.|++++++....++.. .++++.++. +.+++.+.|.++|
T Consensus 292 ---------~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~-------------~i~~~~~~~~~~~~~~~~L~~~g 349 (401)
T PRK10874 292 ---------IDINQAESWSRSLATLAEDALAKLPGFRSFRCQDS-------------SLLAFDFAGVHHSDLVTLLAEYG 349 (401)
T ss_pred ---------hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCC-------------cEEEEEECCcCHHHHHHHHHHCC
Confidence 12345677788888889999988755544332222 245556653 4567878889999
Q ss_pred EEeecCCCCCC-------CCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 418 ILTRSGKHFGF-------SPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 418 I~v~pg~~fg~-------~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
|.+++|..+.. ..+++|+|+.. ++++++.+++.|++++
T Consensus 350 I~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~ 396 (401)
T PRK10874 350 IALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRAL 396 (401)
T ss_pred cEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHH
Confidence 99999987631 25799999974 8999999999998875
No 124
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=1.4e-25 Score=226.43 Aligned_cols=269 Identities=18% Similarity=0.166 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcC----------
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVK---------- 212 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g---------- 212 (456)
.+|.+.++++++. ...+++++++|+++++..+++.+..+|+. +|+..+++|+++...+...+
T Consensus 88 ~~la~~l~~~~~~-----~~~~~v~~~~sgsea~~~al~~~~~~g~~---~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~ 159 (398)
T PRK03244 88 IALAERLVELLGA-----PEGGRVFFCNSGAEANEAAFKLARLTGRT---KIVAAEGGFHGRTMGALALTGQPAKRAPFE 159 (398)
T ss_pred HHHHHHHHHhCCC-----CCCCEEEEeCchHHHHHHHHHHHHHHCCC---eEEEECCCcCCccHHHHhccCCcccccCCC
Confidence 5666666666431 12368999999999999999987767643 78888899998865443221
Q ss_pred ---CeEeeec-cCcccccc---CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCC--CC--
Q 012785 213 ---SRLYKWA-GDAKRFNK---DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTS--IT-- 272 (456)
Q Consensus 213 ---~~~~~~~-~d~~~l~~---~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~--~~-- 272 (456)
.++..++ .|.+.++. .++++++++.++||+|.+++ ++|+++|+++|+||+|.+.++.+ ..
T Consensus 160 ~~~~~~~~~~~~d~~~l~~~~~~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~ 239 (398)
T PRK03244 160 PLPGGVEHVPYGDVDALAAAVDDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQ 239 (398)
T ss_pred CCCCCceEeCCCCHHHHHHhhcCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhh
Confidence 1222232 25555543 36788999889999999987 27999999999999998643332 11
Q ss_pred -CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHH
Q 012785 273 -YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFE 351 (456)
Q Consensus 273 -~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~ 351 (456)
.....+ +.||||.++ +|+|+||++++ +++++.+.......+++.+++.|.++.+.|+.+.+.
T Consensus 240 ~~~~~pD--i~t~sK~l~-~G~~ig~~~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~------------- 302 (398)
T PRK03244 240 HDGVTPD--VVTLAKGLG-GGLPIGACLAF-GPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASE------------- 302 (398)
T ss_pred hhCCCCC--EEEEchhhh-CCcccEEEEEc-HHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhc-------------
Confidence 111122 358899999 99999999997 888888876555568899999999999998854332
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC--ccccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhCCEEeecCCCCCC
Q 012785 352 FTNHQMSTRWKQLRMAVQKSGL--FSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGNKILTRSGKHFGF 428 (456)
Q Consensus 352 ~~~~~~~~~~~~l~~~L~~~~~--~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~gI~v~pg~~fg~ 428 (456)
...++++++++.+.+.|++++. +...+ ..++++|+.++. ....+.+.+.++||.+.+.
T Consensus 303 ~~~~~~~~~~~~l~~~L~~~~~~~~~~v~--------------g~g~~~~i~~~~~~~~~~~~~l~~~Gv~~~~~----- 363 (398)
T PRK03244 303 GLLENAERLGEQLRAGIEALGHPLVDHVR--------------GRGLLLGIVLTAPVAKAVEAAAREAGFLVNAV----- 363 (398)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCceeeEe--------------eccEEEEEEEeccHHHHHHHHHHHCCeEEeec-----
Confidence 2445666777778888887531 11111 233478998853 3566788888999999883
Q ss_pred CCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 429 SPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 429 ~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
..+.+|++++ .+++++++++++|++++
T Consensus 364 ~~~~iR~~p~~~~t~~~i~~~~~~l~~~l 392 (398)
T PRK03244 364 APDVIRLAPPLIITDAQVDAFVAALPAIL 392 (398)
T ss_pred CCCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 2578999965 38999999999999876
No 125
>PRK10534 L-threonine aldolase; Provisional
Probab=99.94 E-value=3.6e-25 Score=218.20 Aligned_cols=293 Identities=12% Similarity=0.084 Sum_probs=193.7
Q ss_pred eEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHH
Q 012785 96 IINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQL 175 (456)
Q Consensus 96 ~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~a 175 (456)
+|||+++..+.+.| ...++.. ....+ ...|++..+ ..+|+++|+++++. + .+++++|++++
T Consensus 1 ~~~~~~~~~~~p~~-~~~~a~~--~~~~~---~~~Y~~~~~-----~~~L~~~la~~~g~------~--~~~v~~~g~~a 61 (333)
T PRK10534 1 MIDLRSDTVTRPSR-AMLEAMM--AAPVG---DDVYGDDPT-----VNALQDYAAELSGK------E--AALFLPTGTQA 61 (333)
T ss_pred CcccccccCCCCCH-HHHHHHH--hccCC---CcccCCCHH-----HHHHHHHHHHHhCC------C--eEEEeCchHHH
Confidence 47899988777544 3443211 11222 235643333 48999999999874 2 45677778888
Q ss_pred HHHHHHHhcCCCCCCCcEEEEeCCCCCC-hhhh-hhhcC-CeEeeec------cCcccccc---C------CCeEEEEcC
Q 012785 176 FQAALYALSSQDASEPISVVSAAPYYSS-YPSI-TDCVK-SRLYKWA------GDAKRFNK---D------GPYIELVTS 237 (456)
Q Consensus 176 l~~~~~~l~~~gd~~~~~Vlv~~P~y~~-~~~~-~~~~g-~~~~~~~------~d~~~l~~---~------~~~~i~v~~ 237 (456)
+.+++.+++.+|| +|+++.|+|.. |... +...+ .+.+.++ .|.+.++. . ++++++++|
T Consensus 62 ~~~~l~~~~~~gd----~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~n 137 (333)
T PRK10534 62 NLVALLSHCERGE----EYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLEN 137 (333)
T ss_pred HHHHHHHhcCCCC----eeEEechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEec
Confidence 8888888899999 99999888853 4322 33444 5555443 34444432 1 478999987
Q ss_pred CCCCCcccchH--------HhhhcCcEEEeeecCCCCC----CCCC---CCCCCCcEEEecCccccCCCCceEE-EEEEe
Q 012785 238 PNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQ----YTSI---TYPADHDLMLFTVSKSTGHAGTRIG-WALVK 301 (456)
Q Consensus 238 P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~----~~~~---~~~~~~~i~i~S~SK~~g~~G~RiG-~l~~~ 301 (456)
|+ ||.+++. +|+++++++|+||+|.... .... ....+ .++.||||.+|++ +| |++++
T Consensus 138 p~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~--~~~~s~SK~~~~~---~G~~~~~~ 210 (333)
T PRK10534 138 TH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCD--SFTICLSKGLGTP---VGSLLVGN 210 (333)
T ss_pred CC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCC--EEEEEeEcCCCCc---ccceEEcC
Confidence 66 5998872 5778899999999976311 0111 11112 3345899988754 78 57775
Q ss_pred CHHHHHHHHHHHhhccCcC--ChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCC
Q 012785 302 DMEVAKKMTKYIELNTIGV--SKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPEL 379 (456)
Q Consensus 302 ~~~~~~~l~~~~~~~~~~~--s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 379 (456)
+++++.+++.+.....+. +.+.|.++...|+ + ..+. ++..+++|+.+.+.|++++ +.+.
T Consensus 211 -~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~---~-----------~~~~-~~~~~~~r~~l~~~L~~~g-~~~~-- 271 (333)
T PRK10534 211 -RDYIKRARRWRKMTGGGMRQAGILAAAGLYALK---H-----------NVAR-LQEDHDNAAWLAEQLREAG-ADVM-- 271 (333)
T ss_pred -HHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHH---h-----------hHHH-HHHHHHHHHHHHHHHHhCC-CccC--
Confidence 999999988876443333 3355666666554 1 1222 2234456788999998874 3333
Q ss_pred CCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEec--CChhHHHHHHHHHHhhhC
Q 012785 380 PSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGNKILTRSGKHFGFSPKYVRISML--DRDENYNLFVQRLSKILS 456 (456)
Q Consensus 380 ~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l~ 456 (456)
++++||+|++++. +.+.+.+.|+++||.++||. ++|++.. .++|++++++++|++++.
T Consensus 272 ------------~~~~nfv~~~~~~~~~~~~~~~l~~~gi~v~~~~-------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 272 ------------RQDTNMLFVRVGEEQAAALGEYMRERNVLINASP-------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred ------------CCCceEEEEECCchhHHHHHHHHHHcCeeecCCc-------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 3345599999864 45677899999999999863 5788765 389999999999998763
No 126
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.94 E-value=2.1e-24 Score=216.94 Aligned_cols=319 Identities=14% Similarity=0.114 Sum_probs=212.6
Q ss_pred CCCCeEEecCCCC-CCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEcc
Q 012785 92 GGERIINVDHGDP-TMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGT 170 (456)
Q Consensus 92 ~~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~ 170 (456)
.++.+|||..+++ .+.+++.+.+.... .+..-......|....|. .....+++++++++++ .++.|++++
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~-~~~~~~~~~~~~~~~~g~-~~~~~~l~~~la~~~~-------~~~~i~~~~ 107 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQ-AARRYGAGSGGSRLVTGN-SPAHEALEEELAEWFG-------AERALLFSS 107 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHH-HHHhcCCCCCCcCcccCC-cHHHHHHHHHHHHHhC-------CCcEEEECc
Confidence 5678999999875 33344444443221 111100000112222220 0003566666666664 245666666
Q ss_pred CHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc-Ccccccc----C--CCeEEEEcCCCCCCc
Q 012785 171 GSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG-DAKRFNK----D--GPYIELVTSPNNPDG 243 (456)
Q Consensus 171 G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-d~~~l~~----~--~~~~i~v~~P~NPtG 243 (456)
|+ +++..++..++++|| .|++++|+|+.+...++..|.+++.++. |.+.++. . ++.++++++++||||
T Consensus 108 g~-~~~~~~l~~~~~~gd----~V~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G 182 (385)
T PRK05958 108 GY-AANLAVLTALAGKGD----LIVSDKLNHASLIDGARLSRARVRRYPHNDVDALEALLAKWRAGRALIVTESVFSMDG 182 (385)
T ss_pred HH-HHHHHHHHHhCCCCC----EEEEeCccCHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhccCCCeEEEEEecccCCC
Confidence 65 555667788899999 9999999999999999988998877654 4454432 1 346677777899999
Q ss_pred ccch-----HHhhhcCcEEEeeecCCCCCCC--C--C-----CCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHH
Q 012785 244 SVRQ-----SVVNRSGGILVHDLAYYWPQYT--S--I-----TYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKM 309 (456)
Q Consensus 244 ~~~~-----~l~~~~~~~iI~De~y~~~~~~--~--~-----~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l 309 (456)
...+ ++|+++|+++|+||+|....+. + . ....+++|+++||||.+|.+| ||++++ +++.+.+
T Consensus 183 ~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~-~~~~~~~ 258 (385)
T PRK05958 183 DLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGS-ETLIDYL 258 (385)
T ss_pred CcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcC-HHHHHHH
Confidence 8765 3899999999999999632111 1 1 122457899999999999777 999886 8888877
Q ss_pred HHHHh-h-ccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccc
Q 012785 310 TKYIE-L-NTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFL 387 (456)
Q Consensus 310 ~~~~~-~-~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~ 387 (456)
.+... . .+.+.++..+.++.++|+.+. +. +..+++++++++.+.+.|++.+ +.+..+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~aa~~aal~~~~-----------~~-~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~------- 318 (385)
T PRK05958 259 INRARPFIFTTALPPAQAAAARAALRILR-----------RE-PERRERLAALIARLRAGLRALG-FQLMDSQ------- 318 (385)
T ss_pred HHhCccceecCCCCHHHHHHHHHHHHHHh-----------cC-HHHHHHHHHHHHHHHHHHHHcC-CCcCCCC-------
Confidence 65432 1 223455655556667776321 11 4567889999999999998864 3333333
Q ss_pred cccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCC--CCCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 388 GRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFG--FSPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 388 ~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg--~~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
++|+|+.++. +...+.+.|+++||.+.++..+. .+++++||++. .+++++++++++|++++
T Consensus 319 -------~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 319 -------SAIQPLIVGDNERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred -------CCEEEEEeCCHHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 3367888764 34567788889999999865542 23579999997 38999999999999875
No 127
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.94 E-value=5.7e-25 Score=219.64 Aligned_cols=271 Identities=14% Similarity=0.107 Sum_probs=194.4
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc-
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG- 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~- 220 (456)
..++++.+|++++. +.+++++|+++++..++.++.++|| +|+++.+.|......++..|++++.++.
T Consensus 53 ~~~~~e~lA~~~g~--------~~~~i~~g~~~a~~~~~~~l~~~gd----~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~ 120 (370)
T TIGR02539 53 IHDFLEDLAEFLGM--------DEARVTHGAREGKFAVMHALCKEGD----WVVLDGLAHYTSYVAAERAGLNVKEVPHT 120 (370)
T ss_pred HHHHHHHHHHHhCC--------CceEEECChHHHHHHHHHHhhCCCC----EEEECCcccHHHHHHHHHcCCEEEEEecC
Confidence 36788889999874 3567799999999999999999999 9999988866555778889999887765
Q ss_pred -------Ccccccc----------CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCC
Q 012785 221 -------DAKRFNK----------DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADH 277 (456)
Q Consensus 221 -------d~~~l~~----------~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~ 277 (456)
|.+.++. .++++|++++|+||||...+ ++|+++|+++|+||+|..... +.. ...+.
T Consensus 121 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~-~~~~~~~~~ 199 (370)
T TIGR02539 121 GHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRM-PVSAKEIGA 199 (370)
T ss_pred CcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCc-CCCHHHcCC
Confidence 4444422 14679999999999999876 388999999999999986321 211 12356
Q ss_pred cEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccC--------cCChHHHHHHHHHHHhhhCCCCCCCCcchhH
Q 012785 278 DLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTI--------GVSKDSQLRAAKVLKVVSDSCKPSGSEDECF 349 (456)
Q Consensus 278 ~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~--------~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~ 349 (456)
+++++||||.++ +|.|+||++++ +++++.++.......+ ......+.++.+.+.. ..++
T Consensus 200 di~v~s~sK~~~-~~g~~G~l~~~-~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-----------~~~~ 266 (370)
T TIGR02539 200 DFIVGSGHKSMA-ASGPCGVLGMS-EEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPH-----------VVER 266 (370)
T ss_pred CEEEeeCccccc-CCCCEEEEEEC-HHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHH-----------HHHH
Confidence 788999999999 67899999996 8999988776532111 1111144444444541 1345
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc----------cHHHHHHHHHhCCEE
Q 012785 350 FEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----------EIEDCESFLKGNKIL 419 (456)
Q Consensus 350 l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----------~~~~~~~~l~~~gI~ 419 (456)
+++.++.++.+ +.+.+.|++++ +.+.. +.++.++|++++++. ....+.+.|+++||.
T Consensus 267 l~~~~~~~~~~-~~l~~~L~~~g-~~~~~-----------~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~ 333 (370)
T TIGR02539 267 VKRWDEEVKKT-RWFVAELEDIG-FIQLG-----------QKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIH 333 (370)
T ss_pred HHHHHHHHHHH-HHHHHHHHhCC-cEEEc-----------cCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCc
Confidence 55555555554 57899998875 33311 113445688887652 123588899999997
Q ss_pred -eecCCCCCCCCCeEEEEec-CChhHHHHHHHHHHhhhC
Q 012785 420 -TRSGKHFGFSPKYVRISML-DRDENYNLFVQRLSKILS 456 (456)
Q Consensus 420 -v~pg~~fg~~~~~iRis~~-~~~e~i~~~l~~L~~~l~ 456 (456)
+++| . ++++|+++. .++++++++++.|+++++
T Consensus 334 ~ir~~----~-~~~iRis~~~~t~e~i~~l~~~L~~~~~ 367 (370)
T TIGR02539 334 GIRSG----Q-TKYFKLSVYGLTKEQVEYVVDSFEEIVE 367 (370)
T ss_pred cccCC----c-ceEEEEEecCCCHHHHHHHHHHHHHHHH
Confidence 6642 2 569999963 399999999999998763
No 128
>PLN02721 threonine aldolase
Probab=99.94 E-value=1.1e-24 Score=216.46 Aligned_cols=305 Identities=12% Similarity=0.083 Sum_probs=197.5
Q ss_pred CeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHH
Q 012785 95 RIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQ 174 (456)
Q Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~ 174 (456)
.+++|+.+.|+.+.+.+.+.. . . ...+ ....+|++ . ..+|+++++++++. +..+++++| ++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~a~-~-~-~~~~-~~~~~~~~-~------~~~l~~~la~~~~~-------~~~~~~~~G-s~ 66 (353)
T PLN02721 6 RVVDLRSDTVTKPTDAMRAAM-A-N-AEVD-DDVLGYDP-T------ALRLEEEMAKIFGK-------EAALFVPSG-TM 66 (353)
T ss_pred hhhhhhcccccCCCHHHHHHH-H-h-ccCC-CcccCCCH-H------HHHHHHHHHHHhCC-------ceeEEecCc-cH
Confidence 458999999997655444432 1 1 1111 11223433 3 38999999999974 223444455 55
Q ss_pred HHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhh---hhhhcCCeEeeecc------Ccccccc----------CCCeEEE
Q 012785 175 LFQAALYALSS-QDASEPISVVSAAPYYSSYPS---ITDCVKSRLYKWAG------DAKRFNK----------DGPYIEL 234 (456)
Q Consensus 175 al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~---~~~~~g~~~~~~~~------d~~~l~~----------~~~~~i~ 234 (456)
++.+++.++.. +|| +|++++|+|..... .+...|.+++.++. |.+.++. .++++++
T Consensus 67 a~~~~l~~~~~~~gd----~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~ 142 (353)
T PLN02721 67 GNLISVLVHCDVRGS----EVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLIC 142 (353)
T ss_pred HHHHHHHHHccCCCC----eEEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEE
Confidence 56677777776 899 99999999854433 56777888877664 3343332 2568888
Q ss_pred EcC-CCCCCcccch--------HHhhhcCcEEEeeecCCCCCC--CCCC---CCCCCcEEEecCccccCCCCceEEEEEE
Q 012785 235 VTS-PNNPDGSVRQ--------SVVNRSGGILVHDLAYYWPQY--TSIT---YPADHDLMLFTVSKSTGHAGTRIGWALV 300 (456)
Q Consensus 235 v~~-P~NPtG~~~~--------~l~~~~~~~iI~De~y~~~~~--~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~ 300 (456)
+++ ||||||.+++ ++|+++|+++|+|++|..... .+.. ...+...++.|+||.++. ++||+++
T Consensus 143 l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~---~~G~~~~ 219 (353)
T PLN02721 143 LENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGA---PVGSVIV 219 (353)
T ss_pred EeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCC---ceeeEEe
Confidence 866 5889999876 268999999999999863211 1111 111334667789998873 4687443
Q ss_pred eCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccc-cCC
Q 012785 301 KDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSV-PEL 379 (456)
Q Consensus 301 ~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~ 379 (456)
.++++++.+...+.....+.+...+.++..+.. .+++++++++. .++++.+.+.|++++++.+ ..+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------l~~~~~~~~~~-~~~~~~l~~~L~~~~~~~~~~~~ 286 (353)
T PLN02721 220 GSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVA------------LQENVPKLEDD-HKKAKLLAEGLNQIKGLRVNVAA 286 (353)
T ss_pred cCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHH------------HHHHHHHHHHH-HHHHHHHHHHHHhCCCcEEecCC
Confidence 358998887776653333333333333332222 12344444333 5667889999988755532 111
Q ss_pred CCcccccccccCCCCCceEEeecCc----cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEec--CChhHHHHHHHHHHh
Q 012785 380 PSQFCTFLGRAFEPQPAFAWLKCEQ----EIEDCESFLKGNKILTRSGKHFGFSPKYVRISML--DRDENYNLFVQRLSK 453 (456)
Q Consensus 380 ~g~~~~~~~~~~~~~~~f~~~~~~~----~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~ 453 (456)
+.++|+|++++. +.+.+.+.|.++||.++|+. .+++|++++ .+++++++++++|++
T Consensus 287 -------------~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~-----~~~lR~~~~~~~~~~~i~~~~~~l~~ 348 (353)
T PLN02721 287 -------------VETNIVYFDITDGSRITAEKLCKSLEEHGVLLMPGN-----SSRIRVVTHHQISDSDVQYTLSCFQQ 348 (353)
T ss_pred -------------ccceEEEEEccCCccccHHHHHHHHHhCCcEEecCC-----CceEEEEecCcCCHHHHHHHHHHHHH
Confidence 223378888853 46778888889999999963 568999986 289999999999998
Q ss_pred hhC
Q 012785 454 ILS 456 (456)
Q Consensus 454 ~l~ 456 (456)
++.
T Consensus 349 ~~~ 351 (353)
T PLN02721 349 AAL 351 (353)
T ss_pred Hhh
Confidence 763
No 129
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.94 E-value=7e-25 Score=220.01 Aligned_cols=268 Identities=16% Similarity=0.155 Sum_probs=189.1
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhc---C----CCCCCCcEEEEeCCCCCChhhhhhhcCCe
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALS---S----QDASEPISVVSAAPYYSSYPSITDCVKSR 214 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~---~----~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~ 214 (456)
..+|++.++++++. +++++++|+++++.++++++. . +++ +|++.+|+|+.+...+...+..
T Consensus 71 ~~~l~~~la~~~g~--------~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~----~vi~~~~~yh~~~~~~~~~~~~ 138 (379)
T TIGR00707 71 QEELAEKLVEHSGA--------DRVFFCNSGAEANEAALKLARKYTGDKGKEKK----KIIAFENSFHGRTMGALSATGQ 138 (379)
T ss_pred HHHHHHHHHhhCCC--------CEEEEeCCcHHHHHHHHHHHHHHhhccCCCCC----eEEEECCCcCCccHHHHHhcCC
Confidence 36777778777642 489999999999999998663 2 256 9999999999988777665543
Q ss_pred Ee-------------eec-cCcccccc---CCCeEEEEcCCCCCCccc-ch--------HHhhhcCcEEEeeecCCCCCC
Q 012785 215 LY-------------KWA-GDAKRFNK---DGPYIELVTSPNNPDGSV-RQ--------SVVNRSGGILVHDLAYYWPQY 268 (456)
Q Consensus 215 ~~-------------~~~-~d~~~l~~---~~~~~i~v~~P~NPtG~~-~~--------~l~~~~~~~iI~De~y~~~~~ 268 (456)
.. .++ .|.+.++. .++++++++.++||+|.. ++ ++|+++++++|+||+|.+..+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~ 218 (379)
T TIGR00707 139 PKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGR 218 (379)
T ss_pred hhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 21 011 04444433 256788885556666754 33 278999999999999986433
Q ss_pred CC--CC----CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCC
Q 012785 269 TS--IT----YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPS 342 (456)
Q Consensus 269 ~~--~~----~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~ 342 (456)
.+ .. ....+ +.||||.++ +|+|+||++++ +++++.+.......+++.+++.|.++.++|+.+..
T Consensus 219 ~g~~~~~~~~~~~~d---~~t~sK~~~-~G~riG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~----- 288 (379)
T TIGR00707 219 TGKFFAYEHYGIEPD---IITLAKGLG-GGVPIGATLAK-EEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEK----- 288 (379)
T ss_pred cchhhhHHhcCCCCC---EEEEccccc-CCcccEEEEEc-HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh-----
Confidence 21 11 11122 347999999 99999999996 89998887755556788899999999998874322
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeec
Q 012785 343 GSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRS 422 (456)
Q Consensus 343 ~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~p 422 (456)
...+++++++++.+.+.|++... .... ...++.++|+|++++.+...+.+.|.++||.+.|
T Consensus 289 --------~~~~~~~~~~~~~~~~~l~~~~~-~~~~----------~~~~~~g~~~~~~~~~~~~~~~~~l~~~Gv~v~~ 349 (379)
T TIGR00707 289 --------ERLLENVKEKGDYFKERLEELGK-NYPN----------KEVRGKGLMLGIELEAPCKDIVKKALEKGLLVNC 349 (379)
T ss_pred --------hhHHHHHHHHHHHHHHHHHHHHh-hCCC----------CccccCceEEEEEecCcHHHHHHHHHHCCcEEee
Confidence 13455666777777777765421 1100 0011234588998865667788889999999998
Q ss_pred CCCCCCCCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 423 GKHFGFSPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 423 g~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
+. .+++|++++ .+++++++++++|++++
T Consensus 350 ~~-----~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 350 AG-----PKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred CC-----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 42 579999964 48999999999998864
No 130
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.94 E-value=7e-25 Score=221.01 Aligned_cols=269 Identities=10% Similarity=0.094 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcC---------CCCCCCcEEEEeCCCCCChhhhhhhc-C
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSS---------QDASEPISVVSAAPYYSSYPSITDCV-K 212 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~---------~gd~~~~~Vlv~~P~y~~~~~~~~~~-g 212 (456)
.+|.+.++++.+ .+.+++++++++|++.+++.+.. +|.. +|+..+-+|++....+... +
T Consensus 85 ~~l~~~l~~~~~--------~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~---~ii~~~~~~HG~~~~~~~~~~ 153 (396)
T PRK04073 85 GPWYEKVAKLTG--------KDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKA---EIIACEGNFHGRTMAAVSLSS 153 (396)
T ss_pred HHHHHHHHhcCC--------CCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCC---EEEEECCCcCCCCHHHHhhcC
Confidence 456666665532 35899999999999999997742 2321 7999988899876443322 1
Q ss_pred --------------CeEeeeccCcccccc---CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCC
Q 012785 213 --------------SRLYKWAGDAKRFNK---DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWP 266 (456)
Q Consensus 213 --------------~~~~~~~~d~~~l~~---~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~ 266 (456)
...++++ |.+.++. .+++++++++|+||||.+++ ++|+++|+++|.||+|.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~-d~~~l~~~i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~ 232 (396)
T PRK04073 154 EEEYKRGFGPMLPGIKKIPYG-DLEALKAAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGL 232 (396)
T ss_pred CcccccCCCCCCCCceEeCCC-CHHHHHHhcccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCC
Confidence 1222222 4555543 36788889889999999876 2799999999999999965
Q ss_pred CCCC--CC-CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCC
Q 012785 267 QYTS--IT-YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSG 343 (456)
Q Consensus 267 ~~~~--~~-~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~ 343 (456)
.+.+ .. ...+...-+.+|||.+|.+|+|+||++++ +++++.+.......+++.+++.|.++.+.|+.+.+.
T Consensus 233 g~~g~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~~~-~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~----- 306 (396)
T PRK04073 233 GRTGKLFACDWDNVTPDMYILGKALGGGVFPISCVAAN-RDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEE----- 306 (396)
T ss_pred CcCcHHHHhhhcCCCCCEEEecccccCCCCcceEEEEc-HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhc-----
Confidence 4332 11 11121222456899999888999999996 899988876555578899999999999999854322
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhcC--CccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEee
Q 012785 344 SEDECFFEFTNHQMSTRWKQLRMAVQKSG--LFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTR 421 (456)
Q Consensus 344 ~~~~~~l~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~ 421 (456)
...++.+++++++.+.|++++ .+...+ +.++|++++++...+.+.+.|.++||.+.
T Consensus 307 --------~l~~~~~~~~~~l~~~L~~l~~~~i~~~~--------------~~g~~~~~~~~~~~~~~~~~l~~~Gv~~~ 364 (396)
T PRK04073 307 --------KLPERSLELGEYFKEQLKEIDNPMIKEVR--------------GRGLFIGVELNEPARPYCEALKEEGLLCK 364 (396)
T ss_pred --------CHHHHHHHHHHHHHHHHHhhcCCccccee--------------cceEEEEEEecchHHHHHHHHHHCCeEEe
Confidence 234556677888888887753 122222 23347888886556677788889999998
Q ss_pred cCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhhC
Q 012785 422 SGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 422 pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l~ 456 (456)
+. ++++|||+ +..++|++++++++|+++++
T Consensus 365 ~~-----~~~~iRi~p~l~~t~e~i~~~~~~l~~~l~ 396 (396)
T PRK04073 365 ET-----HETVIRFAPPLVITKEELDWAFEKIKAVLS 396 (396)
T ss_pred cC-----CCCEEEEECCcccCHHHHHHHHHHHHHHhC
Confidence 72 25799999 44699999999999999874
No 131
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.93 E-value=1.6e-24 Score=217.50 Aligned_cols=316 Identities=12% Similarity=0.150 Sum_probs=223.2
Q ss_pred hcCCCCeEEecCCCC--CCCchh---HhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCc
Q 012785 90 QDGGERIINVDHGDP--TMYEKY---WQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENH 164 (456)
Q Consensus 90 ~~~~~~~i~l~~g~p--~~~~~~---~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~ 164 (456)
+..+..++.|.+++| |+.++. .+... +..++..+. ..|.+..| .++|+++++++++. +
T Consensus 7 ~~~g~n~~~l~~~~v~iDlltds~t~ams~~-~~~a~~~gd---~~Y~~~~g-----~~~Leeaia~~~g~--------~ 69 (431)
T cd00617 7 KEAGYNVFLLRSEDVYIDLLTDSGTGAMSDY-QWAAMMLGD---EAYAGSKS-----FYDLEDAVQDLFGF--------K 69 (431)
T ss_pred HHcCCCEEeCCCCCcCCCCCCCCCcHHHHHH-HHHHHHhCC---CccCCCCC-----HHHHHHHHHHHHCC--------C
Confidence 567788999999999 777663 11111 111223332 25988888 49999999999964 5
Q ss_pred eEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc----------------Ccccccc-
Q 012785 165 HIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG----------------DAKRFNK- 227 (456)
Q Consensus 165 ~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~----------------d~~~l~~- 227 (456)
++++|+|+++|+.+++.+++++|| .| +++|+|..+...+...|++++.++. |.+.++.
T Consensus 70 ~vv~t~~Gt~Al~la~~al~~pGD----~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~ 144 (431)
T cd00617 70 HIIPTHQGRGAENILFSILLKPGR----TV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKL 144 (431)
T ss_pred eEEEcCCHHHHHHHHHHHhCCCCC----EE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHH
Confidence 899999999999999999999999 77 6999999999999999998875544 3333332
Q ss_pred --C----CCeEEEEcCCCCCC-cccch--------HHhhhcCcEEEeeecCCC----------CCCCCCCCCCCCcEEEe
Q 012785 228 --D----GPYIELVTSPNNPD-GSVRQ--------SVVNRSGGILVHDLAYYW----------PQYTSITYPADHDLMLF 282 (456)
Q Consensus 228 --~----~~~~i~v~~P~NPt-G~~~~--------~l~~~~~~~iI~De~y~~----------~~~~~~~~~~~~~i~i~ 282 (456)
. ++++|++++||||+ |.+++ ++|+++|++||+|++... +++... ...+.++.++
T Consensus 145 I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~-si~ei~~e~~ 223 (431)
T cd00617 145 IDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDK-SIAEIAREMF 223 (431)
T ss_pred hCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCC-CHHHHHHHhh
Confidence 1 26789999999998 88875 389999999999999431 111111 1123456688
Q ss_pred cCccccCCCCce------EEEEEEeCHHHHHHHHHHH----hhccCcCChHHHHHH-HHHHHhhhCCCCCCCCcchhHHH
Q 012785 283 TVSKSTGHAGTR------IGWALVKDMEVAKKMTKYI----ELNTIGVSKDSQLRA-AKVLKVVSDSCKPSGSEDECFFE 351 (456)
Q Consensus 283 S~SK~~g~~G~R------iG~l~~~~~~~~~~l~~~~----~~~~~~~s~~~q~~a-~~~L~~~~~~~~~~~~~~~~~l~ 351 (456)
|+||.+.++|+| .||+++++++++++++... ...+.+.-..-|..+ +..|+ +. .+ .+
T Consensus 224 s~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~---e~--------~~-~~ 291 (431)
T cd00617 224 SYADGCTMSAKKDGLVNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLR---EA--------VE-ED 291 (431)
T ss_pred ccCCEEEEEeecCCCCccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHH---hc--------cc-HH
Confidence 999999999988 5699998667999887542 112223222333333 33554 21 01 23
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-----------cHHHHHHHHHhCCEEe
Q 012785 352 FTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-----------EIEDCESFLKGNKILT 420 (456)
Q Consensus 352 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-----------~~~~~~~~l~~~gI~v 420 (456)
.+.++++ +++++.+.|.+.+ +.+..|.|++ |+|++++. +...+.+++++.||.+
T Consensus 292 ~l~~~~~-~r~~l~~~L~~~G-~~v~~P~Ggh-------------~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~ 356 (431)
T cd00617 292 YLRHRVE-QVRYLGDRLDEAG-VPIVEPAGGH-------------AVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRA 356 (431)
T ss_pred HHHHHHH-HHHHHHHHHHHCC-CCccCCCcce-------------EEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeE
Confidence 3444444 5588999999886 7788889988 89998752 3455678999999997
Q ss_pred ec-CCC-CCC----------CCCeEEEEecC---ChhHHHHHHHHHHhhh
Q 012785 421 RS-GKH-FGF----------SPKYVRISMLD---RDENYNLFVQRLSKIL 455 (456)
Q Consensus 421 ~p-g~~-fg~----------~~~~iRis~~~---~~e~i~~~l~~L~~~l 455 (456)
.. |+. ++. .-+.+|+++.+ +.++++...+.|..++
T Consensus 357 ~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~ 406 (431)
T cd00617 357 VELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALY 406 (431)
T ss_pred EeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHH
Confidence 54 442 121 13689999874 8899999999998775
No 132
>PLN02483 serine palmitoyltransferase
Probab=99.93 E-value=6.8e-24 Score=218.04 Aligned_cols=283 Identities=16% Similarity=0.101 Sum_probs=199.0
Q ss_pred ccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhh
Q 012785 131 FSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDC 210 (456)
Q Consensus 131 y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~ 210 (456)
|+...+ ..+|++++|++++. ++.|++++|... ...++.+++++|| .|++++|+|+.+...++.
T Consensus 142 ~g~~~~-----~~ele~~lA~~~g~-------~~ai~~~~G~~a-n~~~i~al~~~Gd----~Vi~d~~~h~s~~~~~~~ 204 (489)
T PLN02483 142 GGTTKL-----HRELEELVARFVGK-------PAAIVFGMGYAT-NSTIIPALIGKGG----LIISDSLNHNSIVNGARG 204 (489)
T ss_pred cCCcHH-----HHHHHHHHHHHhCC-------CcEEEECCHHHH-HHHHHHHhCCCCC----EEEEcchhhHHHHHHHHH
Confidence 555545 58999999999974 568888887654 4477788999999 999999999999999999
Q ss_pred cCCeEeeecc-Ccccccc----------CC-----CeEEEEcC-CCCCCcccch-----HHhhhcCcEEEeeecCCCC--
Q 012785 211 VKSRLYKWAG-DAKRFNK----------DG-----PYIELVTS-PNNPDGSVRQ-----SVVNRSGGILVHDLAYYWP-- 266 (456)
Q Consensus 211 ~g~~~~~~~~-d~~~l~~----------~~-----~~~i~v~~-P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~-- 266 (456)
.|++++.++. |.+.++. .+ .+++++++ ..|++|.+.+ ++|+++++++|+||+|...
T Consensus 205 ~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~ 284 (489)
T PLN02483 205 SGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAV 284 (489)
T ss_pred cCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCcc
Confidence 9999988875 3333321 11 25455545 4699998866 4899999999999999621
Q ss_pred CC-----CCCC--CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccC--cCChHHHHHHHHHHHhhhC
Q 012785 267 QY-----TSIT--YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTI--GVSKDSQLRAAKVLKVVSD 337 (456)
Q Consensus 267 ~~-----~~~~--~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~--~~s~~~q~~a~~~L~~~~~ 337 (456)
+. .... ...+.+|+++||||++|++| ||++++ +++++.++.......+ ..++....++.+.|+.+..
T Consensus 285 G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G---G~i~~~-~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~ 360 (489)
T PLN02483 285 GKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG---GYIAGS-KELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILG 360 (489)
T ss_pred CCCCCchHHhcCCCcccCcEEEEecchhcccCc---eEEEcC-HHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHh
Confidence 11 1111 12467899999999999877 999986 9999999876432112 2233333345555654332
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC--ccHHHHHHHHHh
Q 012785 338 SCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE--QEIEDCESFLKG 415 (456)
Q Consensus 338 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~--~~~~~~~~~l~~ 415 (456)
.. ..++..+.+++++++++.+.+.|++++ +.+..+.++. .+|+.+. .....+.+.|.+
T Consensus 361 ~~------g~~~~~~~~~~l~~~~~~l~~~L~~~G-~~v~~~~~sp-------------~~~l~l~~~~~~~~~~~~Ll~ 420 (489)
T PLN02483 361 ED------GTNRGAQKLAQIRENSNFFRSELQKMG-FEVLGDNDSP-------------VMPIMLYNPAKIPAFSRECLK 420 (489)
T ss_pred Cc------cccchHHHHHHHHHHHHHHHHHHHHCC-CcccCCCCCC-------------EEEEEECCHHHHHHHHHHHHH
Confidence 20 123445567889999999999999874 4444333332 4555442 234456677778
Q ss_pred CCEEeecCCCCCC---CCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 416 NKILTRSGKHFGF---SPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 416 ~gI~v~pg~~fg~---~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
+||.+.| ..|.. ..+.+|++++. ++|++++++++|++++
T Consensus 421 ~GI~v~~-~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~ 464 (489)
T PLN02483 421 QNVAVVV-VGFPATPLLLARARICISASHSREDLIKALEVISEVG 464 (489)
T ss_pred CCcEEee-eCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 9999997 56632 34789999875 8999999999999874
No 133
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.93 E-value=2e-23 Score=207.86 Aligned_cols=275 Identities=13% Similarity=0.151 Sum_probs=194.2
Q ss_pred cccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChh--
Q 012785 128 LSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYP-- 205 (456)
Q Consensus 128 ~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~-- 205 (456)
.+.|+++. ..+|++++|++.+. + ..++++|+++++.+++ .++.+|| +|++++|+|+...
T Consensus 46 y~r~~~pt------~~~le~~la~l~g~------~--~~~~~~sG~~ai~~~~-~ll~~Gd----~Vl~~~~~y~~t~~~ 106 (366)
T PRK08247 46 YSRTGNPT------RGVLEQAIADLEGG------D--QGFACSSGMAAIQLVM-SLFRSGD----ELIVSSDLYGGTYRL 106 (366)
T ss_pred ccCCCCch------HHHHHHHHHHHhCC------C--cEEEEcCHHHHHHHHH-HHhCCCC----EEEEecCCcCcHHHH
Confidence 34567666 48999999999874 2 3466777789999876 5778999 9999999999753
Q ss_pred --hhhhhcCCeEeeecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC-CCCCCC
Q 012785 206 --SITDCVKSRLYKWAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ-YTSITY 273 (456)
Q Consensus 206 --~~~~~~g~~~~~~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~-~~~~~~ 273 (456)
..++..|+++..++. |.+.++. .++++|++++|+||+|...+ ++|+++|+++|+|++|..+- ..++
T Consensus 107 ~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~-- 184 (366)
T PRK08247 107 FEEHWKKWNVRFVYVNTASLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPL-- 184 (366)
T ss_pred HHHHhhccCceEEEECCCCHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCch--
Confidence 344568998887775 4555543 36899999999999998755 37899999999999996421 1222
Q ss_pred CCCCcEEEecCccccCC-CCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHH
Q 012785 274 PADHDLMLFTVSKSTGH-AGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEF 352 (456)
Q Consensus 274 ~~~~~i~i~S~SK~~g~-~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~ 352 (456)
..+.+|+++|+||.++- ++++.||++++++++.+++...+.......+++.|.++...|+ .+..
T Consensus 185 ~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~---------------tl~~ 249 (366)
T PRK08247 185 EEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMK---------------TLAL 249 (366)
T ss_pred hcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccC---------------cHHH
Confidence 34568999999999963 4679999998657888888888776677788888887777655 2333
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccc-cCC-CCcccccccccCCCCCceEEeecCccHHHHHHHH-------------HhCC
Q 012785 353 TNHQMSTRWKQLRMAVQKSGLFSV-PEL-PSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFL-------------KGNK 417 (456)
Q Consensus 353 ~~~~~~~~~~~l~~~L~~~~~~~~-~~~-~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l-------------~~~g 417 (456)
..++.+++++.+.+.|++++.+.. ..| .|++ |.| .++. .+...+.+ ..+.
T Consensus 250 r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~-------------~sf-~~~~-~~~~~~~~~~l~~~~~~~slg~~~s 314 (366)
T PRK08247 250 RMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGM-------------LSF-RLQD-EEWVNPFLKSLKLITFAESLGGVES 314 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcE-------------EEE-EECC-HHHHHHHHHcCCcceEccCCCCCce
Confidence 445679999999999999876553 333 6776 555 5542 22222111 2345
Q ss_pred EEeecCCCCC------------CCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 418 ILTRSGKHFG------------FSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 418 I~v~pg~~fg------------~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
+.+.|++.+. ..++.+|+|++. |+.+.+++.|.+.|
T Consensus 315 l~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl--E~~~dl~~dl~~al 362 (366)
T PRK08247 315 FITYPATQTHADIPEEIRIANGVCNRLLRFSVGI--ENVEDLIADLKQAF 362 (366)
T ss_pred EEECCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHH
Confidence 6667875542 235789999864 34445555555544
No 134
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.92 E-value=1.3e-23 Score=212.76 Aligned_cols=271 Identities=16% Similarity=0.150 Sum_probs=192.3
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcC--CCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeec
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSS--QDASEPISVVSAAPYYSSYPSITDCVKSRLYKWA 219 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~--~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~ 219 (456)
..+|++++|++++. ++.|++++|+ +++..++..+.. +|+ .|+++.+.|..+...++..|.++..++
T Consensus 93 ~~~Le~~la~~~g~-------~~~i~~~sG~-~a~~~~i~~l~~~~~g~----~vi~~~~~h~s~~~~~~~~g~~~~~~~ 160 (410)
T PRK13392 93 HVLLERELADLHGK-------ESALLFTSGY-VSNDAALSTLGKLLPGC----VILSDALNHASMIEGIRRSGAEKQVFR 160 (410)
T ss_pred HHHHHHHHHHHhCC-------CCEEEECcHH-HHHHHHHHHHhcCCCCC----EEEEehhhhHHHHHHHHHcCCeEEEEe
Confidence 37899999999863 4678888885 667777776643 777 888877777777677787888876654
Q ss_pred c-Ccccc----c---cCCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCC----CCCCCCC---CCCCC-c
Q 012785 220 G-DAKRF----N---KDGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYW----PQYTSIT---YPADH-D 278 (456)
Q Consensus 220 ~-d~~~l----~---~~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~----~~~~~~~---~~~~~-~ 278 (456)
. |.+.+ + ..++++|++++|+||||.+++ ++|+++++++|+||+|.. +...++. ...++ +
T Consensus 161 ~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~d 240 (410)
T PRK13392 161 HNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRID 240 (410)
T ss_pred CCCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCc
Confidence 3 22222 2 136789999999999999877 388999999999999982 1111221 11233 5
Q ss_pred EEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhh--ccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHH
Q 012785 279 LMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIEL--NTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQ 356 (456)
Q Consensus 279 i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~--~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~ 356 (456)
++++||||.||++| ||++++ +++++.+++.... .+.+.+++.|.++.++|+.+.. ....++.
T Consensus 241 iv~~tlsK~~g~~G---G~~~~~-~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~------------~~~~~~~ 304 (410)
T PRK13392 241 MIQGTLAKAFGCLG---GYIAAS-ADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKT------------SQTERDA 304 (410)
T ss_pred EEEEEChHhhhccc---chhhcC-HHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhc------------CHHHHHH
Confidence 88999999999998 999985 8999988876532 2445666788888888874321 2345677
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHH-HhCCEEeecCCCCC--CCCC
Q 012785 357 MSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFL-KGNKILTRSGKHFG--FSPK 431 (456)
Q Consensus 357 ~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l-~~~gI~v~pg~~fg--~~~~ 431 (456)
++++++.+.+.|++.+ +.+.++.+. |+.+.++. ....+.+.| +++||.++++.... .+..
T Consensus 305 ~~~~~~~l~~~L~~~g-~~~~~~~~~--------------~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~ 369 (410)
T PRK13392 305 HQDRVAALKAKLNANG-IPVMPSPSH--------------IVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTE 369 (410)
T ss_pred HHHHHHHHHHHHHHcC-CCCCCCCCC--------------EEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCc
Confidence 8899999999998864 444433333 44344432 334566655 57899999865332 2457
Q ss_pred eEEEEec--CChhHHHHHHHHHHhhh
Q 012785 432 YVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 432 ~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
++||++. .++++++.+++.|++++
T Consensus 370 ~lRis~~~~~t~edid~l~~aL~~~~ 395 (410)
T PRK13392 370 RLRITPTPLHDDEDIDALVAALVAIW 395 (410)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 9999985 48999999999998874
No 135
>PRK06460 hypothetical protein; Provisional
Probab=99.92 E-value=2.4e-23 Score=207.68 Aligned_cols=204 Identities=13% Similarity=0.127 Sum_probs=154.7
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCC----CChhhhhhhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYY----SSYPSITDCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y----~~~~~~~~~~g~~~~~ 217 (456)
..+|++++|++.+. +..+++++| ++++..++.+++++|| +|+++.|.| ..+...++..|+++..
T Consensus 47 ~~~L~~~lA~l~g~-------~~~v~~~sG-~~ai~~~l~al~~~Gd----~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~ 114 (376)
T PRK06460 47 VLELTKKIVELENA-------EMGVAFSSG-MGAISTTALALLKPGN----SVLVHRDMFGRSYRFFTDYLKNWGVNVDA 114 (376)
T ss_pred HHHHHHHHHHHhCC-------CcEEEeCCH-HHHHHHHHHHHhCCCC----EEEEecCCcCcHHHHHHHHHHhhCcEEEE
Confidence 48999999999864 235666555 6899999999999999 999998655 4455677888999887
Q ss_pred eccCcccc----ccCCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCcccc
Q 012785 218 WAGDAKRF----NKDGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKST 288 (456)
Q Consensus 218 ~~~d~~~l----~~~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~ 288 (456)
++.+.+.+ ...++++|++++||||||.+++ ++|+++|+++|+|++|..+ ....+...+.+++++|+||.+
T Consensus 115 ~~~~~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~-~~~~~l~~~~divv~S~sK~l 193 (376)
T PRK06460 115 SNPGSDNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTP-INQKPLELGADIVVHSASKFL 193 (376)
T ss_pred ECCCCHHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcc-ccCChhhcCCCEEEeecceec
Confidence 77653322 2346799999999999999988 3788999999999999854 111112235689999999998
Q ss_pred C-CCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 012785 289 G-HAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMA 367 (456)
Q Consensus 289 g-~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 367 (456)
+ +.|.|+||++++ +++++++++.+.....+.++..+ ..+++ + .++++..++++.++++.+.+.
T Consensus 194 ~G~~~~~~G~~~~~-~~l~~~l~~~~~~~g~~~~~~~a---~~~l~----~--------~~~l~~r~~~~~~n~~~l~~~ 257 (376)
T PRK06460 194 AGHNDVIAGLAAGY-GKLLNVIDQMRRTLGTSLDPHAA---YLTLR----G--------IKTLKIRMDVINRNAEQIAEF 257 (376)
T ss_pred cCCCCceEEEEecC-HHHHHHHHHHHHhcCCCCCHHHH---HHHHh----c--------hhhHHHHHHHHHHHHHHHHHH
Confidence 5 335789999986 89999998877655555555433 33333 1 356778888999999999999
Q ss_pred HHhcCCc
Q 012785 368 VQKSGLF 374 (456)
Q Consensus 368 L~~~~~~ 374 (456)
|++++.+
T Consensus 258 L~~~p~v 264 (376)
T PRK06460 258 LEGHPKV 264 (376)
T ss_pred HHcCCCc
Confidence 9988654
No 136
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=5.6e-24 Score=204.40 Aligned_cols=313 Identities=16% Similarity=0.183 Sum_probs=221.7
Q ss_pred hcCCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEc
Q 012785 90 QDGGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVG 169 (456)
Q Consensus 90 ~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t 169 (456)
...+-.+.+|||.+|.+... ++++.....+.++ .+|.++. .+|.+.+++... ..+.|+++
T Consensus 47 f~~Giav~~lGH~hP~iv~a--l~~Q~~kl~h~sn----~~~~~~~-------~~la~~L~~~s~-------~~d~vff~ 106 (404)
T COG4992 47 FAAGIAVNNLGHCHPALVEA--LKEQAEKLWHVSN----LFYNEPQ-------AELAEKLVELSP-------FADRVFFC 106 (404)
T ss_pred eccceeeeccCCCCHHHHHH--HHHHHHHhhhccc----ccCChHH-------HHHHHHHHhhCc-------cccEEEEc
Confidence 45667889999999876543 3433222222222 1344433 456565555542 14799999
Q ss_pred cCHHHHHHHHHHHhcCCCC-CCCcEEEEeCCCCCChhhhhhhcCCeE---------------eeeccCcccccc---CCC
Q 012785 170 TGSTQLFQAALYALSSQDA-SEPISVVSAAPYYSSYPSITDCVKSRL---------------YKWAGDAKRFNK---DGP 230 (456)
Q Consensus 170 ~G~~~al~~~~~~l~~~gd-~~~~~Vlv~~P~y~~~~~~~~~~g~~~---------------~~~~~d~~~l~~---~~~ 230 (456)
|+++||++.+++...+.+. .+..+|+...-+|++....+-.++.+. ++|. |.++++. +++
T Consensus 107 NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-Di~al~~ai~~~t 185 (404)
T COG4992 107 NSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-DIEALEAAIDEDT 185 (404)
T ss_pred CCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-CHHHHHHHhccCe
Confidence 9999999999998754332 122289999999999887666654433 2232 6666553 377
Q ss_pred eEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCCCCC-----CCcEEEecCccccCCCCceEE
Q 012785 231 YIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSITYPA-----DHDLMLFTVSKSTGHAGTRIG 296 (456)
Q Consensus 231 ~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~~~~-----~~~i~i~S~SK~~g~~G~RiG 296 (456)
.+|++..-|...|+..+ ++|+++|+++|.||++.+.+.++-.... ..+ |.++.|.+| .|++||
T Consensus 186 aAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PD--I~tlaK~Lg-GG~Pig 262 (404)
T COG4992 186 AAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPD--ILTLAKALG-GGFPIG 262 (404)
T ss_pred EEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCC--EEEeecccc-CCccce
Confidence 89999777888888876 3899999999999999987777643222 223 556899999 999999
Q ss_pred EEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q 012785 297 WALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSV 376 (456)
Q Consensus 297 ~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~ 376 (456)
.+++. +.+.+.+....+.+|+|.++++..++.+.|+.+.+ ++.+++.++.-..-++.|.+...+.+.+.-
T Consensus 263 A~la~-~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~---------e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~ 332 (404)
T COG4992 263 AMLAT-EEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLE---------EGLLENVREKGEYLLQRLRELKRRYPLVKE 332 (404)
T ss_pred eeEEc-hhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcc---------hhHHHHHHHHHHHHHHHHHHHhhcCCceee
Confidence 99996 77788888888889999999999999999997755 345555444443344444443333344455
Q ss_pred cCCCCcccccccccCCCCCceEEeecCcc--HHHHHHHHHhCCEEeecCCCCCCCCCeEEEEec--CChhHHHHHHHHHH
Q 012785 377 PELPSQFCTFLGRAFEPQPAFAWLKCEQE--IEDCESFLKGNKILTRSGKHFGFSPKYVRISML--DRDENYNLFVQRLS 452 (456)
Q Consensus 377 ~~~~g~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~--~~~e~i~~~l~~L~ 452 (456)
.+..|. ++-+.+..+ ..++.+.++++|+++.+ .+++.+|+.-. .++|++++++++|+
T Consensus 333 vRG~GL--------------miGiel~~~~~a~~~~~~~~~~gvL~~~-----a~~~ViR~~PpL~i~~eei~~~~~~l~ 393 (404)
T COG4992 333 VRGRGL--------------MIGIELKEPYRARDIVRALREEGVLVLP-----AGPNVIRFLPPLVITEEEIDEALDALE 393 (404)
T ss_pred eeccee--------------EEEEEecCcccHHHHHHHHHHCCeEEec-----CCCCeEEecCCccCCHHHHHHHHHHHH
Confidence 555554 477787654 68899999999999998 45789999843 49999999999999
Q ss_pred hhh
Q 012785 453 KIL 455 (456)
Q Consensus 453 ~~l 455 (456)
+++
T Consensus 394 ~~l 396 (404)
T COG4992 394 RAL 396 (404)
T ss_pred HHH
Confidence 876
No 137
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.92 E-value=5.3e-23 Score=208.20 Aligned_cols=278 Identities=15% Similarity=0.147 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHh----cCCCCCCCcEEEEeCCCCCC----hhhhhhhcCCe
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYAL----SSQDASEPISVVSAAPYYSS----YPSITDCVKSR 214 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l----~~~gd~~~~~Vlv~~P~y~~----~~~~~~~~g~~ 214 (456)
.++|+++|++++. .++++|++|+|+++++++++.++ .++|| +|+++++.|+. +...++..|++
T Consensus 70 ~~~r~~la~~~~~-----~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd----~vl~~~~~~~s~~~~~~~~~~~~g~~ 140 (406)
T PRK09295 70 ENVRKQAALFINA-----RSAEELVFVRGTTEGINLVANSWGNSNVRAGD----NIIISEMEHHANIVPWQMLCARVGAE 140 (406)
T ss_pred HHHHHHHHHHcCc-----CCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcC----EEEECcchhhHHHHHHHHHHHHcCcE
Confidence 6788888888863 13579999999999999998874 57888 99999988764 45556778998
Q ss_pred EeeeccC------cccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcE
Q 012785 215 LYKWAGD------AKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHDL 279 (456)
Q Consensus 215 ~~~~~~d------~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i 279 (456)
++.++.+ .+.++. .+++++++++|+||||.+++ ++|+++|+++|+|++|.... .++. ...+.++
T Consensus 141 v~~v~~~~~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~-~~~~~~~~~~D~ 219 (406)
T PRK09295 141 LRVIPLNPDGTLQLETLPALFDERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMH-HPVDVQALDCDF 219 (406)
T ss_pred EEEEecCCCCCCCHHHHHHhcCCCcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCc-cccCchhcCCCE
Confidence 8877653 334432 36799999999999999987 37889999999999997532 2222 2345679
Q ss_pred EEecCccccCCCCceEEEEEEeCHHHHHHHHHHH----------------------hhccCcCChHHHHHHHHHHHhhhC
Q 012785 280 MLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYI----------------------ELNTIGVSKDSQLRAAKVLKVVSD 337 (456)
Q Consensus 280 ~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~----------------------~~~~~~~s~~~q~~a~~~L~~~~~ 337 (456)
+++|++|.+|.+| +||++++ +++.+.+.... .......+.....++.++++.+.+
T Consensus 220 ~~~s~~K~~gp~G--~G~l~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~ 296 (406)
T PRK09295 220 YVFSGHKLYGPTG--IGILYVK-EALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSA 296 (406)
T ss_pred EEeehhhccCCCC--cEEEEEc-hHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHH
Confidence 9999999988666 7999997 77766543210 111224555566666677664322
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhC
Q 012785 338 SCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGN 416 (456)
Q Consensus 338 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~ 416 (456)
.-++..+++.++.++.+.+.|++++++.+..+.. . ...+-+.++. +.+++.+.|.++
T Consensus 297 ----------~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~-----------~-~~iv~~~~~~~~~~~~~~~L~~~ 354 (406)
T PRK09295 297 ----------LGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQN-----------R-LGVIAFNLGKHHAYDVGSFLDNY 354 (406)
T ss_pred ----------hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC-----------C-ceEEEEEECCcCHHHHHHHHHhC
Confidence 1245667778888888899888876555544320 0 1123344543 456778889999
Q ss_pred CEEeecCCCCCC-------CCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 417 KILTRSGKHFGF-------SPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 417 gI~v~pg~~fg~-------~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
||.++.|..+.. .++++|+|+.. ++||++.+++.|+++.
T Consensus 355 gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~ 402 (406)
T PRK09295 355 GIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIH 402 (406)
T ss_pred CeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHH
Confidence 999999886531 24689999874 8899999999998764
No 138
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.92 E-value=6.4e-23 Score=207.48 Aligned_cols=280 Identities=17% Similarity=0.196 Sum_probs=198.8
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHh----cCCCCCCCcEEEEeCCCCCCh----hhhhhhcCCe
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYAL----SSQDASEPISVVSAAPYYSSY----PSITDCVKSR 214 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l----~~~gd~~~~~Vlv~~P~y~~~----~~~~~~~g~~ 214 (456)
.++|+.++++++. .++++|++|+|+++++++++.++ .++|| +|+++++.|+.. ...++..|++
T Consensus 65 ~~~r~~ia~~~~~-----~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~----~vl~~~~~~~s~~~~~~~~~~~~g~~ 135 (403)
T TIGR01979 65 EAVREKVAKFINA-----ASDEEIVFTRGTTESINLVAYSWGDSNLKAGD----EIVISEMEHHANIVPWQLLAERTGAT 135 (403)
T ss_pred HHHHHHHHHHhCc-----CCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCC----EEEECcchhhHHHHHHHHHHHhcCcE
Confidence 6888999998864 12568999999999999998875 46788 999999987763 3455677998
Q ss_pred EeeeccCc------ccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcE
Q 012785 215 LYKWAGDA------KRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHDL 279 (456)
Q Consensus 215 ~~~~~~d~------~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i 279 (456)
+..++.|. +.++. .+++++++++|+||||.+++ ++|+++|+++|+|++|.... .++. ...+.++
T Consensus 136 ~~~v~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~-~~~~~~~~~~d~ 214 (403)
T TIGR01979 136 LKFIPLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPH-MPVDVQALDCDF 214 (403)
T ss_pred EEEEecCCCCCCCHHHHHHHhccCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCc-cccCccccCCCE
Confidence 87776543 33332 36789999999999999987 37889999999999997532 2221 2345789
Q ss_pred EEecCccccCCCCceEEEEEEeCHHHHHHHHHHHh---------------------hccCcCChHHHHHHHHHHHhhhCC
Q 012785 280 MLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIE---------------------LNTIGVSKDSQLRAAKVLKVVSDS 338 (456)
Q Consensus 280 ~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~---------------------~~~~~~s~~~q~~a~~~L~~~~~~ 338 (456)
+++|++|.+|.+| +|+++++ +++++.+..... ......+.....++.+.++.+.+
T Consensus 215 ~~~s~~K~~gp~G--~g~l~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~- 290 (403)
T TIGR01979 215 YVFSGHKMYGPTG--IGVLYGK-EELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEA- 290 (403)
T ss_pred EEEecccccCCCC--ceEEEEc-hHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHH-
Confidence 9999999998777 8999996 777766532110 00112344455555666653221
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhCC
Q 012785 339 CKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGNK 417 (456)
Q Consensus 339 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~g 417 (456)
.-+++.+++..+.++.+.+.|++++++++..|... ...++++.+.++. +..++.+.|+++|
T Consensus 291 ---------~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~---------~~~~~~v~~~~~~~~~~~~~~~L~~~g 352 (403)
T TIGR01979 291 ---------IGLENIEAHEHELTAYALERLGEIPGLRIYGPRDA---------EDRGGIISFNVEGVHPHDVGTILDEEG 352 (403)
T ss_pred ---------hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCc---------cccCceEEEEeCCcCHHHHHHHHhhCC
Confidence 12456778888888899998988766665543210 0112345555643 4567788899999
Q ss_pred EEeecCCCC--------CCCCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 418 ILTRSGKHF--------GFSPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 418 I~v~pg~~f--------g~~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
|.+++|..+ + .++++|||+.. ++++++.+++.|++++
T Consensus 353 I~v~~g~~~~~~~~~~~~-~~~~iRiS~~~~~t~~di~~l~~~l~~~~ 399 (403)
T TIGR01979 353 IAVRSGHHCAQPLMRRFG-VPATCRASFYIYNTEEDIDALVEALKKVR 399 (403)
T ss_pred EEEcchhhhhHHHHHHhC-CCCEEEEEeccCCCHHHHHHHHHHHHHHH
Confidence 999988743 2 26799999874 8899999999998875
No 139
>PLN02242 methionine gamma-lyase
Probab=99.92 E-value=4.8e-23 Score=207.52 Aligned_cols=207 Identities=13% Similarity=0.120 Sum_probs=161.8
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhh-----hhcCCeEe
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSIT-----DCVKSRLY 216 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~-----~~~g~~~~ 216 (456)
..+|++.+|++++. +.+++++|+++++.+++.+++++|| +|+++.|.|+.+...+ +..|.++.
T Consensus 78 ~~~LE~~lA~l~g~--------~~~l~~~sG~~Ai~~al~al~~~GD----~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~ 145 (418)
T PLN02242 78 VLNLGRQMAALEGT--------EAAYCTASGMSAISSVLLQLCSSGG----HVVASNTLYGGTHALLAHFLPRKCNITTT 145 (418)
T ss_pred HHHHHHHHHHHhCC--------CeEEEEccHHHHHHHHHHHHhCCCC----EEEEcCCcHHHHHHHHHHhhhhccCceEE
Confidence 47999999999863 4678899999999999999999999 9999999999887654 34687776
Q ss_pred eecc-Ccccccc---C-CCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCcc
Q 012785 217 KWAG-DAKRFNK---D-GPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSK 286 (456)
Q Consensus 217 ~~~~-d~~~l~~---~-~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK 286 (456)
.++. |.+.++. . ++++|++++|+||||.+.+ ++|+++++++|+|++|....+.+. ..+.+|+++||||
T Consensus 146 ~~d~~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~~~--~~g~divv~S~SK 223 (418)
T PLN02242 146 FVDITDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLSPA--RLGADVVVHSISK 223 (418)
T ss_pred EcCCCCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCCHH--HcCCcEEEEeCcc
Confidence 6655 4555543 2 4899999999999999976 378999999999999974333222 2256899999999
Q ss_pred ccCCCCce-EEEEEEeCHHHHHHHHHHHh--hccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHH
Q 012785 287 STGHAGTR-IGWALVKDMEVAKKMTKYIE--LNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQ 363 (456)
Q Consensus 287 ~~g~~G~R-iG~l~~~~~~~~~~l~~~~~--~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 363 (456)
.++.+|.| .||++++ +++++.++..+. ....|.+...|.++..++. .+.+...+++++++++.
T Consensus 224 ~l~g~g~~~gG~iv~~-~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~-------------l~tl~~r~~~~~~~a~~ 289 (418)
T PLN02242 224 FISGGADIIAGAVCGP-AELVNSMMDLHHGALMLLGPTMNPKVAFELSER-------------LPHLSLRMKEHCRRAME 289 (418)
T ss_pred ccCCCCCceEEEEEcC-HHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcC-------------CCcHHHHHHHHHHHHHH
Confidence 99888987 5999986 889998887754 2345666777777766554 12455567789999999
Q ss_pred HHHHHHhcCCcccc
Q 012785 364 LRMAVQKSGLFSVP 377 (456)
Q Consensus 364 l~~~L~~~~~~~~~ 377 (456)
+.+.|++++ +.+.
T Consensus 290 la~~L~~~~-~~V~ 302 (418)
T PLN02242 290 YAKRMKELG-LKVI 302 (418)
T ss_pred HHHHHHhCC-CEEE
Confidence 999999985 4444
No 140
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.92 E-value=5.9e-23 Score=202.72 Aligned_cols=264 Identities=15% Similarity=0.092 Sum_probs=180.2
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhh---hhhhcCCeEeee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPS---ITDCVKSRLYKW 218 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~---~~~~~g~~~~~~ 218 (456)
..++++.++++++ + +++++++|+++++..+++++.++|| +|+++.|+|..... .....|++++.+
T Consensus 34 ~~~l~~~~a~~~g-------~-~~~~~~~~gt~a~~~~~~~l~~~gd----~v~~~~~~~~~~~~~~~~~~~~g~~~~~v 101 (338)
T cd06502 34 TAKLEARAAELFG-------K-EAALFVPSGTAANQLALAAHTQPGG----SVICHETAHIYTDEAGAPEFLSGVKLLPV 101 (338)
T ss_pred HHHHHHHHHHHhC-------C-CeEEEecCchHHHHHHHHHhcCCCC----eEEEecCcceeeecCCcHHHHcCceEEee
Confidence 4788998988885 2 3677777778999999999999999 99999999876443 345578888776
Q ss_pred cc-----Ccccccc----------CCCeEEEEcCCCCCCcccch--------HHhhhcCcEEEeeecCCCC----CCCCC
Q 012785 219 AG-----DAKRFNK----------DGPYIELVTSPNNPDGSVRQ--------SVVNRSGGILVHDLAYYWP----QYTSI 271 (456)
Q Consensus 219 ~~-----d~~~l~~----------~~~~~i~v~~P~NPtG~~~~--------~l~~~~~~~iI~De~y~~~----~~~~~ 271 (456)
+. |.+.++. .+++++++++|||| |.+++ ++|+++|+++|+||+|... ...++
T Consensus 102 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~ 180 (338)
T cd06502 102 PGENGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVAL 180 (338)
T ss_pred cCCCCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCH
Confidence 54 4444432 15789999999998 54434 2678899999999998421 00111
Q ss_pred C-CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhh--ccCcCChHHHHHHHHHHHhhhCCCCCCCCcchh
Q 012785 272 T-YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIEL--NTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDEC 348 (456)
Q Consensus 272 ~-~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~--~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~ 348 (456)
. ...+..+++.|+||.+|++| |++++.++++++++...... .+.+.+.+.+.++...|+ ++ .
T Consensus 181 ~~~~~~~d~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~---~~---------~ 245 (338)
T cd06502 181 KTYKSGVDSVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALE---ND---------L 245 (338)
T ss_pred HHHHhcCCEEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhc---Cc---------h
Confidence 1 11234577889999999887 55443348899988876532 234456677777777775 22 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHH------HhCCEEeec
Q 012785 349 FFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFL------KGNKILTRS 422 (456)
Q Consensus 349 ~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l------~~~gI~v~p 422 (456)
+ .+..+++.++++++.+.|++++. ... ++.++|+.++.+.......+++ .++|+.+.+
T Consensus 246 ~-~~~~~~~~~~~~~l~~~L~~~~~-~~~--------------~~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~ 309 (338)
T cd06502 246 W-LRRLRHDHEMARRLAEALEELGG-LES--------------EVQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFYA 309 (338)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhcCC-Ccc--------------cccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEEe
Confidence 2 23446677778899999988753 222 2344566666643322222222 268999987
Q ss_pred CCCCCCCCCeEEEEecC--ChhHHHHHHHHHHhh
Q 012785 423 GKHFGFSPKYVRISMLD--RDENYNLFVQRLSKI 454 (456)
Q Consensus 423 g~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~ 454 (456)
.. .+++|++... +++++++++++|+++
T Consensus 310 ~~-----~~~lRi~~~~~~~~~~i~~~~~~l~~~ 338 (338)
T cd06502 310 WG-----EGGVRFVTHWDTTEEDVDELLSALKAV 338 (338)
T ss_pred cC-----CCeEEEEeecCCCHHHHHHHHHHHhcC
Confidence 42 3899999863 889999999998753
No 141
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.91 E-value=2.1e-22 Score=200.26 Aligned_cols=287 Identities=16% Similarity=0.165 Sum_probs=195.9
Q ss_pred cccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhh
Q 012785 128 LSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSI 207 (456)
Q Consensus 128 ~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~ 207 (456)
..+|+++. ..+|++++|++. . ++.|++++| ++++..++.+++++|| +|++++|+|..+...
T Consensus 45 y~ry~~p~------~~~Le~~lA~l~-~-------~~~v~~~sG-~~Ai~~~l~all~~Gd----~Vl~~~~~y~~~~~~ 105 (366)
T PRK07582 45 YGRASNPT------WRALEAALGELE-G-------AEALVFPSG-MAAITAVLRALLRPGD----TVVVPADGYYQVRAL 105 (366)
T ss_pred eECCCCcc------HHHHHHHHHHHc-C-------CCEEEECCH-HHHHHHHHHHhcCCCC----EEEEeCCCcHhHHHH
Confidence 34577765 589999999988 2 345666555 5799999999999999 999999999988765
Q ss_pred h----hhcCCeEeeeccCccc-cccCCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCC-CCCCCCCCCC
Q 012785 208 T----DCVKSRLYKWAGDAKR-FNKDGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWP-QYTSITYPAD 276 (456)
Q Consensus 208 ~----~~~g~~~~~~~~d~~~-l~~~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~-~~~~~~~~~~ 276 (456)
+ +..|++++.++.+.+. ....+++++++++|+||||.+.+ ++|+++|+++|+|++|..+ ...++. .+
T Consensus 106 ~~~~l~~~G~~v~~v~~~~~~~~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~--~g 183 (366)
T PRK07582 106 AREYLAPLGVTVREAPTAGMAEAALAGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQRPLE--LG 183 (366)
T ss_pred HHHHHhcCeEEEEEECCCChHHHhccCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccccCchh--cC
Confidence 5 3468888888765322 22246789999999999998765 3788999999999999632 222332 23
Q ss_pred CcEEEecCcccc-CCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHH
Q 012785 277 HDLMLFTVSKST-GHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNH 355 (456)
Q Consensus 277 ~~i~i~S~SK~~-g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~ 355 (456)
.+++++|+||.+ |++|+|+||++++++++.++++..+.......+++.+..+...|+ .+....+
T Consensus 184 ~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~---------------tl~~R~~ 248 (366)
T PRK07582 184 ADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLG---------------TLGLRFA 248 (366)
T ss_pred CcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccc---------------cHHHHHH
Confidence 468999999988 567899999998668899999888776677788888877776665 2334446
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCCcc----cccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCC----
Q 012785 356 QMSTRWKQLRMAVQKSGLFSVPELPSQF----CTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFG---- 427 (456)
Q Consensus 356 ~~~~~~~~l~~~L~~~~~~~~~~~~g~~----~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg---- 427 (456)
+..++...+.+.|++++.+.....+|.- .....+.....+..+-++++ +.+.+.+.+.+.++... +..+|
T Consensus 249 ~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-~~~~~~~~~~~l~~~~~-~~s~G~~~s 326 (366)
T PRK07582 249 RQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-DAAAAERFVAASRLVVA-ATSFGGVHT 326 (366)
T ss_pred HHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-CHHHHHHHHHhCCccee-cccCCCccc
Confidence 6678888999999988755432211100 00111111123334566675 46667777777776553 22222
Q ss_pred -----------CCCCeEEEEecCChhHHHHHHHHHHhh
Q 012785 428 -----------FSPKYVRISMLDRDENYNLFVQRLSKI 454 (456)
Q Consensus 428 -----------~~~~~iRis~~~~~e~i~~~l~~L~~~ 454 (456)
..++.||+|+... +.+.+++.|.+.
T Consensus 327 l~~~~~~~~~~~~~~liR~svGlE--~~~dli~dl~~a 362 (366)
T PRK07582 327 SADRRARWGDAVPEGFVRLSCGIE--DTDDLVADLERA 362 (366)
T ss_pred hhhhHHHcCCCCCCCeEEEEeccC--CHHHHHHHHHHH
Confidence 1346899999652 223344444443
No 142
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=2.4e-22 Score=200.69 Aligned_cols=213 Identities=15% Similarity=0.160 Sum_probs=167.1
Q ss_pred cccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhh
Q 012785 128 LSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSI 207 (456)
Q Consensus 128 ~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~ 207 (456)
.++|+++. ..+|++++|++.+. +.+++++|+++++.+++.+++++|| +|++++|+|+.....
T Consensus 46 Y~R~~~pt------~~~L~~~lA~l~g~--------~~~i~~~sg~~Ai~~~l~~l~~~GD----~Vl~~~~~y~~~~~~ 107 (386)
T PRK08045 46 YSRRGNPT------RDVVQRALAELEGG--------AGAVLTNTGMSAIHLVTTVFLKPGD----LLVAPHDCYGGSYRL 107 (386)
T ss_pred eeCCCCcc------HHHHHHHHHHHhCC--------CeEEEECCHHHHHHHHHHHHcCCCC----EEEEcCCCcHHHHHH
Confidence 34677766 48999999999862 3699999999999999999999999 999999999964433
Q ss_pred hhh----cCCeEeeec-cCcccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCC-CCCCC
Q 012785 208 TDC----VKSRLYKWA-GDAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQY-TSITY 273 (456)
Q Consensus 208 ~~~----~g~~~~~~~-~d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~-~~~~~ 273 (456)
+.. .|.++..++ .|.+.++. .++++|++++|+||||.+++ ++|+++|+++|+|++|..+.. .++
T Consensus 108 ~~~~~~~~gi~v~~vd~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl-- 185 (386)
T PRK08045 108 FDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNPL-- 185 (386)
T ss_pred HHHHHhhCCeEEEEeCCCCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCch--
Confidence 322 234544443 34555543 36799999999999999987 378899999999999986432 223
Q ss_pred CCCCcEEEecCccccC-CCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHH
Q 012785 274 PADHDLMLFTVSKSTG-HAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEF 352 (456)
Q Consensus 274 ~~~~~i~i~S~SK~~g-~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~ 352 (456)
...-+++++|+||.++ +++++.|++++.++++.++++..+.....+.+++.+..+...|+ .+..
T Consensus 186 ~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~---------------tl~~ 250 (386)
T PRK08045 186 ALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLR---------------TLVP 250 (386)
T ss_pred hhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhc---------------cHHH
Confidence 2234699999999985 77889999988668898988877777788899999998888776 2556
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcc
Q 012785 353 TNHQMSTRWKQLRMAVQKSGLFS 375 (456)
Q Consensus 353 ~~~~~~~~~~~l~~~L~~~~~~~ 375 (456)
.+++..++...+.+.|++++.+.
T Consensus 251 R~~~~~~na~~la~~L~~~p~v~ 273 (386)
T PRK08045 251 RMELAQRNAQAIVKYLQTQPLVK 273 (386)
T ss_pred HHHHHHHHHHHHHHHHHcCCCEe
Confidence 77788888999999999987654
No 143
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=5.3e-23 Score=206.22 Aligned_cols=271 Identities=17% Similarity=0.179 Sum_probs=188.5
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhc-CCCCCCCcEEEEeCCCCCChhhhhhhc-CCe-----
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALS-SQDASEPISVVSAAPYYSSYPSITDCV-KSR----- 214 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~-~~gd~~~~~Vlv~~P~y~~~~~~~~~~-g~~----- 214 (456)
..++++.+++++.... +.+.+++++++++++..+++... .+|+. +|++.++.|++........ +..
T Consensus 69 ~~~~~~~la~~l~~~~----~~~~~~~~~sG~~a~~~A~~~a~~~~g~~---~vi~~~~~~Hg~~~~~~~~~~~~~~~~~ 141 (377)
T PRK02936 69 TNSLQEEVASLLAENS----AGDLVFFCNSGAEANEAALKLARKHTGKS---KIVTFEQSFHGRTFGTMSATGQEKIKEG 141 (377)
T ss_pred CCHHHHHHHHHHHhcC----CCCEEEEeCCcHHHHHHHHHHHHHhcCCC---eEEEECCCcCCCcHHhhhccCCcccccc
Confidence 3678888998886421 12579999999999999998653 23431 7999999999765433222 211
Q ss_pred -------Eeeecc-Ccccccc---CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC--
Q 012785 215 -------LYKWAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT-- 272 (456)
Q Consensus 215 -------~~~~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~-- 272 (456)
+..++. |.+.++. .+++++++..+++++|.... ++|+++|+++|+||+|.+..+.+..
T Consensus 142 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~ 221 (377)
T PRK02936 142 FGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFA 221 (377)
T ss_pred CCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhH
Confidence 112221 4444443 35788889888999887743 2899999999999999864433211
Q ss_pred ---CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhH
Q 012785 273 ---YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECF 349 (456)
Q Consensus 273 ---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~ 349 (456)
...+.+ +.||||.++ +|+|+||++++ +++.+.+.......+++.+++.|.++.++|+.+.. +++
T Consensus 222 ~~~~~~~~d--i~t~sK~l~-~G~~ig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---------~~~ 288 (377)
T PRK02936 222 YEQFGLDPD--IVTVAKGLG-NGIPVGAMIGK-KELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQ---------PSF 288 (377)
T ss_pred HHhhCCCCc--EEEEccccc-CCCccEEEEEc-HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh---------ccH
Confidence 011122 447999999 99999999996 89998887655556788999999999999985422 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHh----cCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCC
Q 012785 350 FEFTNHQMSTRWKQLRMAVQK----SGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKH 425 (456)
Q Consensus 350 l~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~ 425 (456)
+++++++.+.+.+.|++ .+.+....+. |+ ++|++++.+.+.+.+.++++||.+.|+
T Consensus 289 ----~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~-g~-------------~~~i~~~~~~~~~~~~l~~~gv~v~~~-- 348 (377)
T PRK02936 289 ----LEEVQEKGEYFLQKLQEELEHLECVKNIRGK-GL-------------MIGIECTEEVAPVIEQLREEGLLVLSA-- 348 (377)
T ss_pred ----HHHHHHHHHHHHHHHHHHHhhCCcEEeEeec-ce-------------EEEEEecchHHHHHHHHHHCCeEEecC--
Confidence 34455566666666654 2222111222 23 799998755677888899999999984
Q ss_pred CCCCCCeEEEEe--cCChhHHHHHHHHHHhhh
Q 012785 426 FGFSPKYVRISM--LDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 426 fg~~~~~iRis~--~~~~e~i~~~l~~L~~~l 455 (456)
+.+++||++ ..+++++++++++|++++
T Consensus 349 ---g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 349 ---GPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred ---CCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 257999995 459999999999998865
No 144
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.91 E-value=2.2e-22 Score=200.82 Aligned_cols=213 Identities=16% Similarity=0.170 Sum_probs=163.1
Q ss_pred cccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhh
Q 012785 128 LSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSI 207 (456)
Q Consensus 128 ~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~ 207 (456)
.++|+++. ..+|++++|++.+ .+++++|+|+++++.+++.+++++|| +|+++.|+|......
T Consensus 45 Y~R~~~p~------~~~le~~lA~l~g--------~~~v~~~~gg~~Ai~~~l~all~~GD----~Vl~~~p~y~~~~~~ 106 (382)
T TIGR02080 45 YSRSGNPT------RDLLQQALAELEG--------GAGAVVTNTGMSAIHLVTTALLGPDD----LLVAPHDCYGGTYRL 106 (382)
T ss_pred ccCCCCch------HHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCCC----EEEEcCCCcHHHHHH
Confidence 35677766 4899999999885 25799999999999999999999999 999999999975543
Q ss_pred hhh----cCCeEeeecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCC-CCCCC
Q 012785 208 TDC----VKSRLYKWAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQY-TSITY 273 (456)
Q Consensus 208 ~~~----~g~~~~~~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~-~~~~~ 273 (456)
+.. .|.++..++. |.+.++. .++++|++++|+||||.+++ ++|+++|+++|+|++|..+.. .++
T Consensus 107 ~~~~~~~~~~~v~~~d~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl-- 184 (382)
T TIGR02080 107 LNALAKKGCFRVLFVDQGDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNPL-- 184 (382)
T ss_pred HHHHHhhcCeEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCCch--
Confidence 332 2445444432 4444543 36899999999999999987 378899999999999985422 222
Q ss_pred CCCCcEEEecCccccC-CCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHH
Q 012785 274 PADHDLMLFTVSKSTG-HAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEF 352 (456)
Q Consensus 274 ~~~~~i~i~S~SK~~g-~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~ 352 (456)
..+-+++++|+||.++ ++|++.|++++.++++.++++..+.......+++.+..+...++ .+..
T Consensus 185 ~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~---------------tl~~ 249 (382)
T TIGR02080 185 ALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGLR---------------TLVA 249 (382)
T ss_pred hhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcccc---------------hHHH
Confidence 1234699999999885 68899999988668899999888777778888888776655443 3333
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcc
Q 012785 353 TNHQMSTRWKQLRMAVQKSGLFS 375 (456)
Q Consensus 353 ~~~~~~~~~~~l~~~L~~~~~~~ 375 (456)
..++..++...+.+.|+.++.++
T Consensus 250 R~~~~~~na~~~a~~L~~~p~v~ 272 (382)
T TIGR02080 250 RMRLQQRNAQAIVEYLQTQPLVK 272 (382)
T ss_pred HHHHHHHHHHHHHHHHHhCCCee
Confidence 46667788889999999887554
No 145
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.91 E-value=2.9e-22 Score=199.34 Aligned_cols=280 Identities=12% Similarity=0.085 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCC--hhhhhhhcCCeEeeecc
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSS--YPSITDCVKSRLYKWAG 220 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~--~~~~~~~~g~~~~~~~~ 220 (456)
.++++.++++++. .+++.+++++|+++++.+++.++..+|| +|+++.|+|+. +...++..|.+++.++.
T Consensus 35 ~~~~~~la~~~g~-----~~~~~~~~~~~~t~al~~~~~~~~~~g~----~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 105 (356)
T cd06451 35 DEILEGLRYVFQT-----ENGLTFLLSGSGTGAMEAALSNLLEPGD----KVLVGVNGVFGDRWADMAERYGADVDVVEK 105 (356)
T ss_pred HHHHHHHHHHhcC-----CCCCEEEEecCcHHHHHHHHHHhCCCCC----EEEEecCCchhHHHHHHHHHhCCCeEEeec
Confidence 4677777777753 1334678899999999999999999999 99999988765 45677888988877654
Q ss_pred C------cccccc----CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcEEEecC
Q 012785 221 D------AKRFNK----DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHDLMLFTV 284 (456)
Q Consensus 221 d------~~~l~~----~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i~i~S~ 284 (456)
| .+.++. .+++++++++|+||||.+++ ++|+++|+++|+|++|.... .++. ...+.++++.|.
T Consensus 106 ~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~-~~~~~~~~~~d~~~~s~ 184 (356)
T cd06451 106 PWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGG-EPFRMDEWGVDVAYTGS 184 (356)
T ss_pred CCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccC-ccccccccCccEEEecC
Confidence 4 333332 26789999999999999987 37889999999999876321 1121 122446788899
Q ss_pred ccccCCCCceEEEEEEeCHHHHHHHHH---HHh----------------hccCcCChHHHHHHHHHHHhhhCCCCCCCCc
Q 012785 285 SKSTGHAGTRIGWALVKDMEVAKKMTK---YIE----------------LNTIGVSKDSQLRAAKVLKVVSDSCKPSGSE 345 (456)
Q Consensus 285 SK~~g~~G~RiG~l~~~~~~~~~~l~~---~~~----------------~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~ 345 (456)
+|.++.| .++||++++ +++++.+.. ... ....+.+...+.++.++++.+.
T Consensus 185 ~K~l~~p-~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~--------- 253 (356)
T cd06451 185 QKALGAP-PGLGPIAFS-ERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLIL--------- 253 (356)
T ss_pred chhccCC-CCcceeEEC-HHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHH---------
Confidence 9999844 468999996 888777753 000 1112234444555556665322
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhC-CEEeec
Q 012785 346 DECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGN-KILTRS 422 (456)
Q Consensus 346 ~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~-gI~v~p 422 (456)
...+++..++.+++++.+.+.|.+.+ +++..+.... .+.+.|+.++. +.+.+.+.|.++ ||.+++
T Consensus 254 -~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~ 321 (356)
T cd06451 254 -EEGLENRWARHRRLAKALREGLEALG-LKLLAKPELR----------SPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAG 321 (356)
T ss_pred -HhhHHHHHHHHHHHHHHHHHHHHHcC-CeeccCcccC----------CCceEEEECCCCCCHHHHHHHHHHhCCEEEec
Confidence 23456677888899999999998864 4443221111 11245676653 456777788777 999999
Q ss_pred CCCCCCCCCeEEEEecC--ChhHHHHHHHHHHhhhC
Q 012785 423 GKHFGFSPKYVRISMLD--RDENYNLFVQRLSKILS 456 (456)
Q Consensus 423 g~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~l~ 456 (456)
|..+. .+++||++++. ++|++++++++|+++++
T Consensus 322 g~~~~-~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 322 GLGPT-AGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred ccccc-cCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 87543 35799999964 79999999999999875
No 146
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.91 E-value=1.2e-22 Score=202.31 Aligned_cols=272 Identities=13% Similarity=0.083 Sum_probs=189.1
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCc
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDA 222 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~ 222 (456)
.+++++++++++. +++++|+|+++++.+++.+++.+|| +|+++.|+|......++..|++++.++.|.
T Consensus 47 ~~l~~~la~~~g~--------~~i~~~~g~t~al~~~l~~~~~~gd----~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~ 114 (361)
T cd06452 47 KDFHHDLAEFLGM--------DEARVTPGAREGKFAVMHSLCEKGD----WVVVDGLAHYTSYVAAERAGLNVREVPNTG 114 (361)
T ss_pred HHHHHHHHHHcCC--------ceEEEeCCHHHHHHHHHHHhcCCCC----EEEEcCCcchHHHHHHHhcCCEEEEEecCC
Confidence 6888888888863 5899999999999999999999999 999999988877777888999998776553
Q ss_pred c--------cccc----------CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCc
Q 012785 223 K--------RFNK----------DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHD 278 (456)
Q Consensus 223 ~--------~l~~----------~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~ 278 (456)
+ .++. .+++++++++|+||||...+ ++|+++|+++|+|++|..... ++. ...+.+
T Consensus 115 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~-~~~~~~~~~d 193 (361)
T cd06452 115 HPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRM-PVSGKELGAD 193 (361)
T ss_pred CCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCc-CCCHHHcCCC
Confidence 2 2211 25789999999999999866 378899999999999984321 121 223568
Q ss_pred EEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhc------cC--cCChHHHHHHHHHHHhhhCCCCCCCCcchhHH
Q 012785 279 LMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELN------TI--GVSKDSQLRAAKVLKVVSDSCKPSGSEDECFF 350 (456)
Q Consensus 279 i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~------~~--~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l 350 (456)
++++|+||.++ ++.|+||++++ +++++++.+.+... .. ......+..+.+.++. ..+++
T Consensus 194 ~~~~s~~K~l~-~~~~~G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-----------~~~~~ 260 (361)
T cd06452 194 FIVGSGHKSMA-ASAPIGVLATT-EEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPH-----------VKERV 260 (361)
T ss_pred EEEecCCcccc-CCCCeEEEEEC-HHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHH-----------HHHHH
Confidence 99999999998 56699999996 88888886654310 01 1111123333343431 12334
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc----------cHHHHHHHHHhCCEEe
Q 012785 351 EFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----------EIEDCESFLKGNKILT 420 (456)
Q Consensus 351 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----------~~~~~~~~l~~~gI~v 420 (456)
++..+. .++++.+.+.|++++++++..+. ++.++|+.++.+. ....+.+.|+++||.+
T Consensus 261 ~~~~~~-~~~~~~l~~~L~~l~g~~v~~~~-----------~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~ 328 (361)
T cd06452 261 KRWDEE-VEKARWFVAELEKIEGIKQLGEK-----------PKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHG 328 (361)
T ss_pred HHHHHH-HHHHHHHHHHHhcCCCeEEECCC-----------CCCCceEEEEcCCcchhhhhccccchhHHHHHHHcCceE
Confidence 333333 33457888999888555543211 1234455555431 1235778888899995
Q ss_pred ecCCCCCCCCCeEEEEecC-ChhHHHHHHHHHHhhhC
Q 012785 421 RSGKHFGFSPKYVRISMLD-RDENYNLFVQRLSKILS 456 (456)
Q Consensus 421 ~pg~~fg~~~~~iRis~~~-~~e~i~~~l~~L~~~l~ 456 (456)
.. .+ ..+++|++... ++|+++.+++.|+++++
T Consensus 329 ~~---~~-~~~~~ri~~~g~~~e~~~~l~~al~~~~~ 361 (361)
T cd06452 329 IK---PG-LTRYFKLSTYGLTWEQVEYVVDAFKEIAE 361 (361)
T ss_pred Ec---CC-CceEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 32 12 25689999844 89999999999998764
No 147
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.91 E-value=2.1e-22 Score=199.65 Aligned_cols=271 Identities=17% Similarity=0.210 Sum_probs=194.1
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc-
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG- 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~- 220 (456)
..++++.++++++. ++.|++++| ++++..++.+++++|| +|++++|+|+.+...++..|++++.++.
T Consensus 48 ~~~l~~~la~~~~~-------~~~iv~~sg-~~a~~~~~~~~~~~gd----~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 115 (349)
T cd06454 48 HEELEEELAEFHGK-------EAALVFSSG-YAANDGVLSTLAGKGD----LIISDSLNHASIIDGIRLSGAKKRIFKHN 115 (349)
T ss_pred HHHHHHHHHHHhCC-------CCEEEeccH-HHHHHHHHHHhcCCCC----EEEEehhhhHHHHHHHHHcCCceEEecCC
Confidence 46788888888753 235555544 6788888888889999 9999999999998888999998877643
Q ss_pred Ccccccc--------CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCC----C---CC-CCCCCcE
Q 012785 221 DAKRFNK--------DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYT----S---IT-YPADHDL 279 (456)
Q Consensus 221 d~~~l~~--------~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~----~---~~-~~~~~~i 279 (456)
|.+.++. .+++++++++|+||||...+ ++|+++|+++|+|++|...... . +. ...+.++
T Consensus 116 ~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i 195 (349)
T cd06454 116 DMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDI 195 (349)
T ss_pred CHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcE
Confidence 4343321 24678888999999999876 3899999999999999631111 1 11 2346789
Q ss_pred EEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhc--cCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHH
Q 012785 280 MLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELN--TIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQM 357 (456)
Q Consensus 280 ~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~--~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~ 357 (456)
+++|+||.++.+| ||++.+ +++.+.+....... ....++..+.++.+.|+.+ .+ .+..++++
T Consensus 196 ~~~s~sK~~~~~g---G~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----------~~-~~~~~~~~ 259 (349)
T cd06454 196 IMGTLGKAFGAVG---GYIAGS-KELIDYLRSYARGFIFSTSLPPAVAAAALAALEVL-----------QG-GPERRERL 259 (349)
T ss_pred EEeechhhhcccC---CEEECC-HHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHH-----------hc-CHHHHHHH
Confidence 9999999998655 999986 88888776653322 2346666677777777632 12 34567889
Q ss_pred HHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC--ccHHHHHHHHHhCCEEeecCCCCC--CCCCeE
Q 012785 358 STRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE--QEIEDCESFLKGNKILTRSGKHFG--FSPKYV 433 (456)
Q Consensus 358 ~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~--~~~~~~~~~l~~~gI~v~pg~~fg--~~~~~i 433 (456)
+++++.+.+.|++.+ +....+.+++ +.++.++ .+.+++.+.|.++||.+.++.... ...+++
T Consensus 260 ~~~~~~l~~~l~~~g-~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~i 325 (349)
T cd06454 260 QENVRYLRRGLKELG-FPVGGSPSHI-------------IPPLIGDDPAKAVAFSDALLERGIYVQAIRYPTVPRGTARL 325 (349)
T ss_pred HHHHHHHHHHHHhcC-CcccCCCCCc-------------EEEEeCCChHHHHHHHHHHHhCCceEEEecCCccCCCCCeE
Confidence 999999999998864 3333332322 3444343 245678888888899999863221 135799
Q ss_pred EEEecC--ChhHHHHHHHHHHhh
Q 012785 434 RISMLD--RDENYNLFVQRLSKI 454 (456)
Q Consensus 434 Ris~~~--~~e~i~~~l~~L~~~ 454 (456)
|++++. +++++++++++|+++
T Consensus 326 Ri~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 326 RISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EEEEeCCCCHHHHHHHHHHHHHh
Confidence 999974 899999999999874
No 148
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.91 E-value=3.6e-22 Score=198.35 Aligned_cols=280 Identities=13% Similarity=0.138 Sum_probs=198.4
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCC-CCC-hhhhhhhcCCeEeeec
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPY-YSS-YPSITDCVKSRLYKWA 219 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~-y~~-~~~~~~~~g~~~~~~~ 219 (456)
..++|+.++++++. +. ....|+++.|+++++..++..+..++| ++++..+. |+. +...++..|.+++.++
T Consensus 33 ~~~~~~~la~~~~~---~~-~~~~i~~~~~gt~~l~~~~~~~~~~~~----~vi~~~~~~~~~~~~~~a~~~g~~~~~i~ 104 (355)
T TIGR03301 33 TDQVRDRLLALAGG---DD-NHTCVLLQGSGTFAVEATIGSLVPRDG----KLLVLINGAYGERLAKICEYLGIPHTDLN 104 (355)
T ss_pred HHHHHHHHHHHhcC---CC-CCcEEEEeCCcHHHHHHHHHhccCCCC----eEEEECCCchhhHHHHHHHHcCCceEEEe
Confidence 36888888888864 11 112688899999999999999988887 76665554 443 4567788899888665
Q ss_pred cC------cccccc-----CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcEEEe
Q 012785 220 GD------AKRFNK-----DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHDLMLF 282 (456)
Q Consensus 220 ~d------~~~l~~-----~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i~i~ 282 (456)
.+ .+.++. .+.+++++++++||||...+ ++|+++++++|+|+++.... .++. ...+.+++++
T Consensus 105 ~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~-~~~~~~~~~~d~~~~ 183 (355)
T TIGR03301 105 FSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGA-IPIDIEELDVDALIA 183 (355)
T ss_pred cCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCC-cccchhhcCccEEEe
Confidence 43 334432 23567778899999999987 47899999999998766322 2221 2346679999
Q ss_pred cCcccc-CCCCceEEEEEEeCHHHHHHHHHHH-----------------hhccCcCChHHHHHHHHHHHhhhCCCCCCCC
Q 012785 283 TVSKST-GHAGTRIGWALVKDMEVAKKMTKYI-----------------ELNTIGVSKDSQLRAAKVLKVVSDSCKPSGS 344 (456)
Q Consensus 283 S~SK~~-g~~G~RiG~l~~~~~~~~~~l~~~~-----------------~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~ 344 (456)
|++|.+ |++| +||++++ +++++.+.... ....++++...+.++.++++.+.+
T Consensus 184 s~~K~l~~~~G--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~------- 253 (355)
T TIGR03301 184 SANKCLEGVPG--FGFVIAR-RDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEA------- 253 (355)
T ss_pred cCCcccccCCc--eeEEEEC-HHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHH-------
Confidence 999986 5566 6999997 88887765210 112346777788887777775432
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc----cHHHHHHHHHhCCEEe
Q 012785 345 EDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----EIEDCESFLKGNKILT 420 (456)
Q Consensus 345 ~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----~~~~~~~~l~~~gI~v 420 (456)
+..+++.+++++++++++.+.|++++ +.+..+.. . ..+.++|+.++. +.+.+.+.|.++||.+
T Consensus 254 --~g~~~~~~~~~~~~~~~~~~~L~~~g-~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i 320 (355)
T TIGR03301 254 --EGGVPARIARYRRNRELLVDGLRALG-FQPLLPER-W---------QSPIIVSFLYPDDPDFDFDDFYQELKERGFVI 320 (355)
T ss_pred --cccHHHHHHHHHHHHHHHHHHHHHcC-CeeecCCC-C---------CCCcEEEEECCCCCcchHHHHHHHHHHCCEEE
Confidence 12356777888999999999998875 33322211 0 111257787763 3457888899999999
Q ss_pred ecCCCCCCCCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 421 RSGKHFGFSPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 421 ~pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
.+|..+. .+++||++.. ++++++++++.|++++
T Consensus 321 ~~~~~~~--~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 321 YPGKLTL--ADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred ECCcccc--ccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 9987654 3799999754 8999999999999864
No 149
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.91 E-value=6e-23 Score=207.41 Aligned_cols=255 Identities=13% Similarity=0.118 Sum_probs=178.3
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-------CCCCCCcEEEEeCCCCCChhhhhhhcC-------------CeEeeecc-Cc
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-------QDASEPISVVSAAPYYSSYPSITDCVK-------------SRLYKWAG-DA 222 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-------~gd~~~~~Vlv~~P~y~~~~~~~~~~g-------------~~~~~~~~-d~ 222 (456)
+.+++++++++|+..+++.... .+.. +|+..+-+|++....+...+ .+...++. |.
T Consensus 98 ~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~---~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 174 (403)
T PRK05093 98 ERVFFANSGAEANEAAFKLARRYACDRHGPEKT---EIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDL 174 (403)
T ss_pred CEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCC---eEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCH
Confidence 5899999999999999986632 1221 79999999998764332211 11222322 55
Q ss_pred ccccc---CCCeEEEEcCCCCCCcccc--h--------HHhhhcCcEEEeeecCCCCCCCCCC---CCCCCcEEEecCcc
Q 012785 223 KRFNK---DGPYIELVTSPNNPDGSVR--Q--------SVVNRSGGILVHDLAYYWPQYTSIT---YPADHDLMLFTVSK 286 (456)
Q Consensus 223 ~~l~~---~~~~~i~v~~P~NPtG~~~--~--------~l~~~~~~~iI~De~y~~~~~~~~~---~~~~~~i~i~S~SK 286 (456)
+.++. .++++|+++ |.||+|.++ + ++|+++|+++|+||+|.+..+.+.. ...+-..-+.||||
T Consensus 175 ~~l~~~l~~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s~sK 253 (403)
T PRK05093 175 AAVKAVIDDHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTSAK 253 (403)
T ss_pred HHHHHHhcCCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEEEecc
Confidence 55543 256677764 888888765 3 3899999999999999864443311 01111111679999
Q ss_pred ccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 012785 287 STGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRM 366 (456)
Q Consensus 287 ~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 366 (456)
+++ +|+|+||++++ +++++.+.......+++.+++.|.++.+.|+.+.++ ..++.++++++.+.+
T Consensus 254 ~l~-~G~rig~vv~~-~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~-------------~~~~~~~~~~~~l~~ 318 (403)
T PRK05093 254 ALG-GGFPIGAMLTT-AEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTP-------------EVLEGVKARRQRFVD 318 (403)
T ss_pred ccc-CCcceEEEEEc-HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhc-------------cHHHHHHHHHHHHHH
Confidence 999 99999999997 899888876555567889999999999988754322 345778889999999
Q ss_pred HHHhcCC-c-cc-cCCCCcccccccccCCCCCceEEeecCc----cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEec-
Q 012785 367 AVQKSGL-F-SV-PELPSQFCTFLGRAFEPQPAFAWLKCEQ----EIEDCESFLKGNKILTRSGKHFGFSPKYVRISML- 438 (456)
Q Consensus 367 ~L~~~~~-~-~~-~~~~g~~~~~~~~~~~~~~~f~~~~~~~----~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~- 438 (456)
.|+++.. . .+ ..+.+|+ ++|+.++. ....+...+.++||.+.|+ +.+++|++++
T Consensus 319 ~L~~~~~~~~~~~~~~~~G~-------------~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~-----g~~~lRl~~~~ 380 (403)
T PRK05093 319 GLQKINQKYGVFSEIRGMGL-------------LIGAELKPQYKGRARDFLNAAAEEGVMVLVA-----GPDVLRFAPSL 380 (403)
T ss_pred HHHHHHhhCCCeEeEeeCce-------------EEEEEecCcchhHHHHHHHHHHHCCeEEecC-----CCCEEEEeCCC
Confidence 9987521 1 11 1112333 78888753 3455677788899999973 3579999644
Q ss_pred -CChhHHHHHHHHHHhhh
Q 012785 439 -DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 439 -~~~e~i~~~l~~L~~~l 455 (456)
.+++++++++++|++++
T Consensus 381 ~~~~~~i~~~~~~l~~~l 398 (403)
T PRK05093 381 VIEEADIDEGLARFEKAV 398 (403)
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 48999999999999876
No 150
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=3.6e-22 Score=200.52 Aligned_cols=247 Identities=14% Similarity=0.172 Sum_probs=175.1
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCC----hhhhhhhcCCeEeee
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSS----YPSITDCVKSRLYKW 218 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~----~~~~~~~~g~~~~~~ 218 (456)
.+|++.+|++.+. ++.+++++| ++++.+++.+++++|| +|+++.|+|.. +...++..|.+++.+
T Consensus 63 ~~Le~~lA~l~g~-------~~~v~~~sG-~~Ai~~~l~all~pGD----~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v 130 (405)
T PRK08776 63 DLLGEALAELEGG-------AGGVITATG-MGAINLVLNALLQPGD----TLVVPHDAYGGSWRLFNALAKKGHFALITA 130 (405)
T ss_pred HHHHHHHHHHhCC-------CceEEEcCH-HHHHHHHHHHHhCCCC----EEEEccCCchHHHHHHHHHHHhcCcEEEEE
Confidence 6888888888752 346665555 7999999999999999 99999999997 344455568888877
Q ss_pred cc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCC-CCCCCCCCCcEEEecCcccc
Q 012785 219 AG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQY-TSITYPADHDLMLFTVSKST 288 (456)
Q Consensus 219 ~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~-~~~~~~~~~~i~i~S~SK~~ 288 (456)
+. |.+.++. .++++|++++|+||||.+.+ ++|+++|+++|+|++|..+.. .++ ..+-+++++|.+|.+
T Consensus 131 ~~~d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl--~~gaDivv~S~tK~l 208 (405)
T PRK08776 131 DLTDPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKPL--EFGADLVLHSTTKYI 208 (405)
T ss_pred CCCCHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccCCcc--cccCCEEEecCceee
Confidence 65 4555543 36799999999999999966 378899999999999986432 233 234469999999999
Q ss_pred CCC-CceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 012785 289 GHA-GTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMA 367 (456)
Q Consensus 289 g~~-G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 367 (456)
+.+ ++..|+++++++++.+++...+.....+.+++.+.++...++ +++...++..++...+.+.
T Consensus 209 ~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~---------------tl~~r~~~~~~na~~la~~ 273 (405)
T PRK08776 209 NGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGLR---------------TLDARLRVHQENADAIAAL 273 (405)
T ss_pred cCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhC---------------cHHHHHHHHHHHHHHHHHH
Confidence 644 688999988778898888877665666778888777765544 5667788888999999999
Q ss_pred HHhcCCccccCCCCcc----cccccccCCCCCceEEeecCccHHHHHHHHHhCCE
Q 012785 368 VQKSGLFSVPELPSQF----CTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKI 418 (456)
Q Consensus 368 L~~~~~~~~~~~~g~~----~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI 418 (456)
|++++.+.....+|.- ....++.....+..+.+.++++.+.+.+.+..-.+
T Consensus 274 L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l 328 (405)
T PRK08776 274 LDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLRY 328 (405)
T ss_pred HHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHHHHHhCCc
Confidence 9988755422222111 11111122233445666776544444555444433
No 151
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.91 E-value=2.8e-22 Score=201.56 Aligned_cols=276 Identities=12% Similarity=0.140 Sum_probs=186.0
Q ss_pred ccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhh-
Q 012785 129 SYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSI- 207 (456)
Q Consensus 129 ~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~- 207 (456)
++|+.+. ..+|++++|++.+. +++++++|+++++..++.+++++|| +|+++.|.|+.+...
T Consensus 59 ~r~~~p~------~~~Le~~iA~~~g~--------~~~l~~~sG~~Ai~~al~~ll~~Gd----~Vl~~~~~y~~~~~~~ 120 (400)
T PRK06234 59 SRLGNPT------STEVENKLALLEGG--------EAAVVAASGMGAISSSLWSALKAGD----HVVASDTLYGCTFALL 120 (400)
T ss_pred cCCCCcc------HHHHHHHHHHHhCC--------CcEEEEcCHHHHHHHHHHHHhCCCC----EEEEecCccchHHHHH
Confidence 3455654 48999999999863 3577888888999999999999999 999999999876544
Q ss_pred ---hhhcCCeEeeecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhc--CcEEEeeecCCCCCCCCCCC
Q 012785 208 ---TDCVKSRLYKWAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRS--GGILVHDLAYYWPQYTSITY 273 (456)
Q Consensus 208 ---~~~~g~~~~~~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~--~~~iI~De~y~~~~~~~~~~ 273 (456)
++..|+++..++. |.+.++. .++++|++++|+||||.+.+ ++|+++ ++++|+|++|..+.+. .+.
T Consensus 121 ~~~~~~~G~~v~~vd~~d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~-~~l 199 (400)
T PRK06234 121 NHGLTRYGVEVTFVDTSNLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQ-RPL 199 (400)
T ss_pred HHHHhhCCeEEEEECCCCHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcC-Cch
Confidence 4667888887765 4555543 36799999999999999977 378886 9999999999854221 112
Q ss_pred CCCCcEEEecCccccCCCCceE-EEEEEeCHHHHHHHHHH--HhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHH
Q 012785 274 PADHDLMLFTVSKSTGHAGTRI-GWALVKDMEVAKKMTKY--IELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFF 350 (456)
Q Consensus 274 ~~~~~i~i~S~SK~~g~~G~Ri-G~l~~~~~~~~~~l~~~--~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l 350 (456)
..+.+|+++|+||.++.+|+|+ ||++++ ++++++++.. ........+++....+...|+ .+
T Consensus 200 ~~g~Divv~S~sK~l~g~g~~~gG~v~~~-~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~---------------tl 263 (400)
T PRK06234 200 QLGADVVVHSATKYLNGHGDVIAGFVVGK-EEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMK---------------TL 263 (400)
T ss_pred hhCCcEEEeeccccccCCCCceeEEEEec-HHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccC---------------cH
Confidence 3356899999999998889876 999986 8888888753 223455667666655555444 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccCCCCc----ccccccccCCCCCceEEeecCccH---HHHHHHHHhCCEEeecC
Q 012785 351 EFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQ----FCTFLGRAFEPQPAFAWLKCEQEI---EDCESFLKGNKILTRSG 423 (456)
Q Consensus 351 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~----~~~~~~~~~~~~~~f~~~~~~~~~---~~~~~~l~~~gI~v~pg 423 (456)
....++..++...+.+.|++++.+.....+|. .+.+.++.....+..+-++++++. ..+.+.|+-.++.+.-|
T Consensus 264 ~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~~~~~s~G 343 (400)
T PRK06234 264 QIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAVSLG 343 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcceEeccCC
Confidence 34455566778888899998765433222221 001111122233445666775432 34445555445444434
Q ss_pred CCC----------------------CCCCCeEEEEecC
Q 012785 424 KHF----------------------GFSPKYVRISMLD 439 (456)
Q Consensus 424 ~~f----------------------g~~~~~iRis~~~ 439 (456)
..+ |..++.||+|++.
T Consensus 344 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl 381 (400)
T PRK06234 344 DAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGL 381 (400)
T ss_pred CCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCC
Confidence 222 1135789999965
No 152
>PRK02948 cysteine desulfurase; Provisional
Probab=99.91 E-value=6.9e-23 Score=205.70 Aligned_cols=278 Identities=12% Similarity=0.090 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhc----CCCCCCCcEEEEeCCCCCC---hhhhhhhcCCeE
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALS----SQDASEPISVVSAAPYYSS---YPSITDCVKSRL 215 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~----~~gd~~~~~Vlv~~P~y~~---~~~~~~~~g~~~ 215 (456)
.++|+.++++++. ++++|++|+|+++++..++.++. ++|+ +|++..+.|+. +...++..|+++
T Consensus 46 ~~~r~~la~~~g~------~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~----~vv~~~~~h~s~~~~~~~~~~~g~~v 115 (381)
T PRK02948 46 QVCRKTFAEMIGG------EEQGIYFTSGGTESNYLAIQSLLNALPQNKK----HIITTPMEHASIHSYFQSLESQGYTV 115 (381)
T ss_pred HHHHHHHHHHhCC------CCCeEEEeCcHHHHHHHHHHHHHHhccCCCC----EEEECCcccHHHHHHHHHHHhCCCEE
Confidence 5778888888764 46799999999999999988885 4677 89998855554 444566678888
Q ss_pred eeeccC------cccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcEE
Q 012785 216 YKWAGD------AKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHDLM 280 (456)
Q Consensus 216 ~~~~~d------~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i~ 280 (456)
..++.| .+.++. .+++++++++|+||||.+++ ++|+++|+++|+|+++.... .++. ...+.+++
T Consensus 116 ~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~-~~~~~~~~~~d~~ 194 (381)
T PRK02948 116 TEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGK-LPIDVFEMGIDSL 194 (381)
T ss_pred EEEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccc-cccCcccCCCCEE
Confidence 776654 333432 35789999999999999988 37899999999997655322 2221 33467899
Q ss_pred EecCccccCCCCceEEEEEEeCHHH-HHHHHH----HHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHH
Q 012785 281 LFTVSKSTGHAGTRIGWALVKDMEV-AKKMTK----YIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNH 355 (456)
Q Consensus 281 i~S~SK~~g~~G~RiG~l~~~~~~~-~~~l~~----~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~ 355 (456)
++|++|.+|.+| +|+++++ +++ ...+.. .......+++.+++.++.++++.. .+++++.++
T Consensus 195 ~~s~~K~~gp~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~-----------~~~~~~~~~ 260 (381)
T PRK02948 195 SVSAHKIYGPKG--VGAVYIN-PQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENI-----------LKNMQEESL 260 (381)
T ss_pred EecHHhcCCCCc--EEEEEEc-CCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHH-----------HHHHHHHHH
Confidence 999999999888 8999986 543 111110 011234567888888888888732 346778889
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCC-CcccccccccCCCCCceEEeecCc-cHHHHHHHHHhCCEEeecCCCCCC-----
Q 012785 356 QMSTRWKQLRMAVQKSGLFSVPELP-SQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGNKILTRSGKHFGF----- 428 (456)
Q Consensus 356 ~~~~~~~~l~~~L~~~~~~~~~~~~-g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~gI~v~pg~~fg~----- 428 (456)
++++.++.+.+.|++++ +.+.... ..+ + .+..+-+.++. +.+.+...|.++||.+++|..+..
T Consensus 261 ~~~~~~~~l~~~L~~~~-~~v~~~~~~~~------~---~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p 330 (381)
T PRK02948 261 RFKELRSYFLEQIQTLP-LPIEVEGHSTS------C---LPHIIGVTIKGIEGQYTMLECNRRGIAISTGSACQVGKQEP 330 (381)
T ss_pred HHHHHHHHHHHHHhcCC-CCEEEeCCCcc------C---cCCEEEEEeCCCCHHHHHHhcccCCEEEEchHhcCCCCCCC
Confidence 99999999999999875 2222111 110 0 01122222332 445566678899999999885311
Q ss_pred -------------CCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 429 -------------SPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 429 -------------~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
..+++|+|+.. ++++++.+++.|++++
T Consensus 331 ~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~ 372 (381)
T PRK02948 331 SKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIG 372 (381)
T ss_pred CHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 14789999863 8999999999998875
No 153
>PRK07179 hypothetical protein; Provisional
Probab=99.91 E-value=5.5e-22 Score=200.83 Aligned_cols=268 Identities=12% Similarity=0.132 Sum_probs=192.8
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc-
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG- 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~- 220 (456)
..+|++.+|++++. +.+++++|+++|+..+++++..+|| .|+++.+.|......++..|.+++.+..
T Consensus 101 ~~~le~~la~~~g~--------~~~~~~~sG~~An~~~l~~l~~~g~----~v~~~~~~h~s~~~~~~~~g~~~~~~~~~ 168 (407)
T PRK07179 101 KPQFEKKLAAFTGF--------ESCLLCQSGWAANVGLLQTIADPNT----PVYIDFFAHMSLWEGVRAAGAQAHPFRHN 168 (407)
T ss_pred HHHHHHHHHHHhCC--------CcEEEECCHHHHHHHHHHHhCCCCC----EEEEECCcCHHHHHHHHHCCCeEEEecCC
Confidence 47888999999863 3567899999999999999999999 9999999998888888888988877753
Q ss_pred Ccccccc----CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC--CC--CCC---CCCCC-cEEEec
Q 012785 221 DAKRFNK----DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ--YT--SIT---YPADH-DLMLFT 283 (456)
Q Consensus 221 d~~~l~~----~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~--~~--~~~---~~~~~-~i~i~S 283 (456)
|.+.++. .++++|++++|+||||.+.+ ++|+++|+++|+||+|.... .. ++. ...++ ++++.|
T Consensus 169 d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S 248 (407)
T PRK07179 169 DVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITAS 248 (407)
T ss_pred CHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEee
Confidence 6665543 24688899999999999988 38999999999999997421 11 111 11123 689999
Q ss_pred CccccCCCCceEEEEEEeCHHHHHHHHHHHhhccC-c-CChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHH
Q 012785 284 VSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTI-G-VSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRW 361 (456)
Q Consensus 284 ~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~-~-~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 361 (456)
+||.+| + |+||++++ +++++.+........+ + .++....++.+.++.+. ..+..++++++++
T Consensus 249 ~sK~~g-~--~~G~l~~~-~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~------------~~~~~~~~l~~~~ 312 (407)
T PRK07179 249 LAKAFA-G--RAGIITCP-RELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIE------------SADDRRARLHANA 312 (407)
T ss_pred chHhhh-c--cCeEEEeC-HHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHh------------cCHHHHHHHHHHH
Confidence 999987 2 69999996 8888777654321112 2 22332233445555321 1235678899999
Q ss_pred HHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCC-----CCCCeEE
Q 012785 362 KQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFG-----FSPKYVR 434 (456)
Q Consensus 362 ~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg-----~~~~~iR 434 (456)
+++.+.|++++ +.+. .. ++++++.++. ..+.+.+.|.++||.+. .|. ...+++|
T Consensus 313 ~~l~~~L~~~g-~~v~-~~--------------~~i~~l~~~~~~~~~~~~~~L~~~GI~~~---~~~~p~~~~~~~~lR 373 (407)
T PRK07179 313 RFLREGLSELG-YNIR-SE--------------SQIIALETGSERNTEVLRDALEERNVFGA---VFCAPATPKNRNLIR 373 (407)
T ss_pred HHHHHHHHHcC-CCCC-CC--------------CCEEEEEeCCHHHHHHHHHHHHHCCceEe---eecCCCCCCCCceEE
Confidence 99999998874 4333 12 2367777653 44667788899999843 221 1357999
Q ss_pred EEecC--ChhHHHHHHHHHHhhhC
Q 012785 435 ISMLD--RDENYNLFVQRLSKILS 456 (456)
Q Consensus 435 is~~~--~~e~i~~~l~~L~~~l~ 456 (456)
|++.. ++++++++++.|+++++
T Consensus 374 is~~~~~t~edi~~~~~~l~~~~~ 397 (407)
T PRK07179 374 LSLNADLTASDLDRVLEVCREARD 397 (407)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHH
Confidence 99975 89999999999998753
No 154
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.91 E-value=5.9e-22 Score=187.58 Aligned_cols=293 Identities=15% Similarity=0.177 Sum_probs=195.9
Q ss_pred ccc-cCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEE-ccCHHHHHHHHHHHh-cC--CC------CCCCcEEEEe
Q 012785 129 SYF-SDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVV-GTGSTQLFQAALYAL-SS--QD------ASEPISVVSA 197 (456)
Q Consensus 129 ~~y-~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~-t~G~~~al~~~~~~l-~~--~g------d~~~~~Vlv~ 197 (456)
..| +...|+ +|+|+..|+.++. ++++|++ +|++-+.++-++... +. .| +.+..+.++|
T Consensus 62 RNY~G~l~Gi-----pe~r~l~a~llgv------~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCP 130 (425)
T PF12897_consen 62 RNYPGGLDGI-----PEARELFAELLGV------PPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCP 130 (425)
T ss_dssp TSS-S-SS-------HHHHHHHHHHHTS-------GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEE
T ss_pred cCCCCccCCh-----HHHHHHHHHHhCC------CHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEec
Confidence 468 888896 9999999999986 5677765 455656555444322 11 11 1235699999
Q ss_pred CCCCCChhhhhhhcCCeEeeeccCccccc----------cCCCeEEE-EcCCCCCCcccchH-----Hh----hhcCcEE
Q 012785 198 APYYSSYPSITDCVKSRLYKWAGDAKRFN----------KDGPYIEL-VTSPNNPDGSVRQS-----VV----NRSGGIL 257 (456)
Q Consensus 198 ~P~y~~~~~~~~~~g~~~~~~~~d~~~l~----------~~~~~~i~-v~~P~NPtG~~~~~-----l~----~~~~~~i 257 (456)
.|+|..+..+++.+|++.++++++.++-+ ....|.|+ ++-.+||||.++|+ ++ ...+..|
T Consensus 131 vPGYDRHFai~E~~Giemi~VpM~~dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI 210 (425)
T PF12897_consen 131 VPGYDRHFAITEHFGIEMIPVPMTEDGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRI 210 (425)
T ss_dssp ES--HHHHHHHHHCT-EEEEEEEETTEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EE
T ss_pred CCCchHHHHHHHhhCcEEEecCCCCCCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEE
Confidence 99999999999999999999998655432 12456664 44559999999994 33 3589999
Q ss_pred EeeecCCCCCC------CC---C------CCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCCh
Q 012785 258 VHDLAYYWPQY------TS---I------TYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSK 322 (456)
Q Consensus 258 I~De~y~~~~~------~~---~------~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~ 322 (456)
+.|++|.--+. .. + ...+++++.+.|.||.. +||..|+++.++ ++.++.+++.....+.|...
T Consensus 211 ~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aaS-~~Nl~~~~~~~~~~tIgpdK 288 (425)
T PF12897_consen 211 FWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAAS-EANLAWIKKHLSVQTIGPDK 288 (425)
T ss_dssp EEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE--HHHHHHHHHHHHHH-S---H
T ss_pred EeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeecC-HHHHHHHHHHhcCceeCccH
Confidence 99999983222 11 1 13578899999999987 599999999997 88888898888888999999
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhc-----CCccccCCCCcccccccccCCCCCce
Q 012785 323 DSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKS-----GLFSVPELPSQFCTFLGRAFEPQPAF 397 (456)
Q Consensus 323 ~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~f 397 (456)
+.|..-.++++...++ .++|+++.++.++-+.+.+.+.|++. +..+|..|.||| |
T Consensus 289 vNQLRHvrff~d~~gG-------v~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGY-------------F 348 (425)
T PF12897_consen 289 VNQLRHVRFFKDAEGG-------VRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGY-------------F 348 (425)
T ss_dssp HHHHHHHHHHHSHHTH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS--------------
T ss_pred HHHHHHHHHhcChhhH-------HHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCce-------------E
Confidence 9999999999965423 57899999999999999888888653 357899999999 9
Q ss_pred EEeec-CccHHHHHHHHHhCCEEeec-CCCCC--C--CCCeEEEEecC-ChhHHHHHHHHHHhh
Q 012785 398 AWLKC-EQEIEDCESFLKGNKILTRS-GKHFG--F--SPKYVRISMLD-RDENYNLFVQRLSKI 454 (456)
Q Consensus 398 ~~~~~-~~~~~~~~~~l~~~gI~v~p-g~~fg--~--~~~~iRis~~~-~~e~i~~~l~~L~~~ 454 (456)
++++. ++..+.+.+++++.||.+.| |..|. . .+..|||+-+. +.|+++.+++.+.-.
T Consensus 349 Isld~~~G~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~c 412 (425)
T PF12897_consen 349 ISLDVLDGTAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATC 412 (425)
T ss_dssp EEEEESTT-HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHH
T ss_pred EEEecCCChHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHH
Confidence 99987 55789999999999999999 77773 2 46789999876 789999998887644
No 155
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.91 E-value=1.1e-21 Score=198.48 Aligned_cols=278 Identities=18% Similarity=0.162 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHH-HhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhh-----hhhcCCeEe
Q 012785 143 PEFAKEVVRLHK-VVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSI-----TDCVKSRLY 216 (456)
Q Consensus 143 ~~lr~aia~~~~-~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~-----~~~~g~~~~ 216 (456)
+++++.+++++. .+|.. ...|++++| ++++.+++.++.++|| +|++++|+|+.+... ++..|.++.
T Consensus 64 ~~l~~~~~~~~~~~~g~~---~~~v~~~sg-t~a~~~~l~~l~~~Gd----~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~ 135 (402)
T cd00378 64 DEIEDLAIERAKKLFGAE---YANVQPHSG-SQANLAVYFALLEPGD----TIMGLDLSHGGHLTHGSFTKVSASGKLFE 135 (402)
T ss_pred HHHHHHHHHHHHHHhCCC---ceeeecCCc-HHHHHHHHHHhcCCCC----EEEEecCccCccccccccccccccceeEE
Confidence 677776665553 33432 235666654 6999999999999999 999999999877544 556676544
Q ss_pred eecc---------Ccccccc----CCCeEEEEcCCCCCCcccchH---HhhhcCcEEEeeecCC-CCCC---CCCCCCCC
Q 012785 217 KWAG---------DAKRFNK----DGPYIELVTSPNNPDGSVRQS---VVNRSGGILVHDLAYY-WPQY---TSITYPAD 276 (456)
Q Consensus 217 ~~~~---------d~~~l~~----~~~~~i~v~~P~NPtG~~~~~---l~~~~~~~iI~De~y~-~~~~---~~~~~~~~ 276 (456)
.++. |.+.++. .+++++++++|+||+...+.+ +|+++|+++|+|++|+ +..+ .+.... .
T Consensus 136 ~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~ 214 (402)
T cd00378 136 SVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-G 214 (402)
T ss_pred EecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-C
Confidence 3322 3343332 367899999999987655554 7899999999999964 2111 111111 3
Q ss_pred CcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHH-HHHHHHHhhhCCCCCCCCcchhHHHHHHH
Q 012785 277 HDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQL-RAAKVLKVVSDSCKPSGSEDECFFEFTNH 355 (456)
Q Consensus 277 ~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~-~a~~~L~~~~~~~~~~~~~~~~~l~~~~~ 355 (456)
.+++++|+||.+ +|.|.||++++++++++++.........+.+...+. ++...+.... +...++.++
T Consensus 215 ~dv~~~s~sK~l--~G~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~----------~~~~~~~~~ 282 (402)
T cd00378 215 ADVVTTTTHKTL--RGPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEAL----------EPEFKAYAK 282 (402)
T ss_pred CcEEEeccccCC--CCCCceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHh----------hHHHHHHHH
Confidence 358899999976 889999999975589998877654334444433333 2233333111 224567778
Q ss_pred HHHHHHHHHHHHHHhcCCcccc-CCCCcccccccccCCCCCceEEeecCc---cHHHHHHHHHhCCEEeecCC----CCC
Q 012785 356 QMSTRWKQLRMAVQKSGLFSVP-ELPSQFCTFLGRAFEPQPAFAWLKCEQ---EIEDCESFLKGNKILTRSGK----HFG 427 (456)
Q Consensus 356 ~~~~~~~~l~~~L~~~~~~~~~-~~~g~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~~l~~~gI~v~pg~----~fg 427 (456)
+++++++.+.+.|++.+ +.+. .+.+++ |+|++++. +...+.+.|+++||.+.++. .++
T Consensus 283 ~~~~~~~~l~~~L~~~g-~~~~~~~~~~~-------------~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~ 348 (402)
T cd00378 283 QVVENAKALAEALKERG-FKVVSGGTDNH-------------LVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSS 348 (402)
T ss_pred HHHHHHHHHHHHHHhCC-CeEeecCCCCe-------------EEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCC
Confidence 89999999999999874 4443 334444 89999863 35677788999999998632 221
Q ss_pred -CCCCeEEEEecC------ChhHHHHHHHHHHhhh
Q 012785 428 -FSPKYVRISMLD------RDENYNLFVQRLSKIL 455 (456)
Q Consensus 428 -~~~~~iRis~~~------~~e~i~~~l~~L~~~l 455 (456)
...+++|+++.. ++++++++++.|++++
T Consensus 349 ~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~ 383 (402)
T cd00378 349 PFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARAL 383 (402)
T ss_pred CCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 135689999754 4899999999999875
No 156
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.91 E-value=7.9e-22 Score=197.68 Aligned_cols=282 Identities=14% Similarity=0.135 Sum_probs=188.2
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhh----hhhhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPS----ITDCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~----~~~~~g~~~~~ 217 (456)
..+|++.++++++. +++++++|+++++..++.+++++|| +|+++.+.|.+... .+...|++++.
T Consensus 63 ~~~le~~la~l~g~--------~~~v~~ssG~~Ai~~al~al~~~Gd----~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~ 130 (390)
T PRK08133 63 VTMFQERLAALEGA--------EACVATASGMAAILAVVMALLQAGD----HVVSSRSLFGSTVSLFEKIFARFGIETTF 130 (390)
T ss_pred HHHHHHHHHHHhCC--------CcEEEECCHHHHHHHHHHHHhCCCC----EEEEccCcchhHHHHHHHHHHHcCcEEEE
Confidence 36888999988852 4688899999999999999999999 99999999987554 45567999888
Q ss_pred ecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCC-CCCCCCCCCcEEEecCccc
Q 012785 218 WAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQY-TSITYPADHDLMLFTVSKS 287 (456)
Q Consensus 218 ~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~-~~~~~~~~~~i~i~S~SK~ 287 (456)
++. |.+.++. .++++|++++|+||||.+.+ ++|+++|+++|+|++|..+.. .++ ..+.+++++|+||.
T Consensus 131 vd~~d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~pl--~~g~Divv~S~sK~ 208 (390)
T PRK08133 131 VDLTDLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQPL--KLGADVVIHSATKY 208 (390)
T ss_pred ECCCCHHHHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCCch--hhCCcEEEeeccee
Confidence 776 3455543 36899999999999999976 488999999999999875322 222 22457999999999
Q ss_pred cCCCCceEE-EEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 012785 288 TGHAGTRIG-WALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRM 366 (456)
Q Consensus 288 ~g~~G~RiG-~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 366 (456)
++.+|.++| |++.+ +++++++...........+++.+..+...+ +.+....++..++...+.+
T Consensus 209 ~~g~g~~~GG~vv~~-~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl---------------~tl~~R~~~~~~~a~~la~ 272 (390)
T PRK08133 209 LDGQGRVLGGAVVGS-KELMEEVFGFLRTAGPTLSPFNAWVFLKGL---------------ETLSLRMEAHSANALALAE 272 (390)
T ss_pred ecCCcceEeEEEEcC-HHHHHHHHHHHHHhCCCCCHHHHHHHHccc---------------chHHHHHHHHHHHHHHHHH
Confidence 998999985 55554 777777776655455555655544433322 2455556666788889999
Q ss_pred HHHhcCCccccCCCCcc----cccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCC----------------
Q 012785 367 AVQKSGLFSVPELPSQF----CTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHF---------------- 426 (456)
Q Consensus 367 ~L~~~~~~~~~~~~g~~----~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~f---------------- 426 (456)
.|++++.+.....+|.- +....+.....+..+-++++++.+.+.+.+..-.+.. .+..+
T Consensus 273 ~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~~-~~~slG~~~sl~~~p~~~~~~ 351 (390)
T PRK08133 273 WLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRVIDATRLIS-ITANLGDTKTTITHPATTTHG 351 (390)
T ss_pred HHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHHHHhCCcce-EeccCCCcceeeecCCCCCcc
Confidence 99988655433222210 0111111122233456667544444444444433321 12111
Q ss_pred ----------CCCCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 427 ----------GFSPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 427 ----------g~~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
|..++.||+|++. |+.+.+++.|.+.|+
T Consensus 352 ~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al~ 389 (390)
T PRK08133 352 RLSPEARAAAGITEGLIRVAVGL--EDVADIKADLARGLA 389 (390)
T ss_pred cCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHHhh
Confidence 1135789999854 345667777776653
No 157
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.91 E-value=2.9e-22 Score=203.92 Aligned_cols=283 Identities=14% Similarity=0.150 Sum_probs=198.2
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHh----cCCCCCCCcEEEEeCCCCCC----hhhhhhhcCCe
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYAL----SSQDASEPISVVSAAPYYSS----YPSITDCVKSR 214 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l----~~~gd~~~~~Vlv~~P~y~~----~~~~~~~~g~~ 214 (456)
.++|++++++++. .++++|++|+|++++++.+++.+ .++|| +|++++|.|+. +...++..|++
T Consensus 79 ~~~r~~la~~~~~-----~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd----~vl~~~~~~~s~~~~~~~~a~~~g~~ 149 (424)
T PLN02855 79 ELARKKVAAFINA-----STSREIVFTRNATEAINLVAYTWGLANLKPGD----EVILSVAEHHSNIVPWQLVAQKTGAV 149 (424)
T ss_pred HHHHHHHHHHcCC-----CCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcC----EEEECCCccHHHHHHHHHHHHHcCCE
Confidence 5888899998864 12479999999999999998863 57888 99999997764 45556778999
Q ss_pred EeeeccCc------ccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcE
Q 012785 215 LYKWAGDA------KRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHDL 279 (456)
Q Consensus 215 ~~~~~~d~------~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i 279 (456)
++.++.+. +.++. .+++++++++|+||||.+++ ++|+++|+++|+|++|..+. .++. ...+.++
T Consensus 150 v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~-~~~~~~~~~~d~ 228 (424)
T PLN02855 150 LKFVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPH-MPVDVQTLGADF 228 (424)
T ss_pred EEEEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCC-cCCCchhcCCCE
Confidence 88776542 33332 36799999999999999988 37899999999999997432 2332 2234578
Q ss_pred EEecCccccCCCCceEEEEEEeCHHHHHHHHHHH--------------------hhccCcCCh-HHHHHHHHHHHhhhCC
Q 012785 280 MLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYI--------------------ELNTIGVSK-DSQLRAAKVLKVVSDS 338 (456)
Q Consensus 280 ~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~--------------------~~~~~~~s~-~~q~~a~~~L~~~~~~ 338 (456)
+++|++|.+|.+| +||++++ +++++++.... .....|.+. ....++.++++.+.
T Consensus 229 ~~~s~~K~~gp~G--~G~l~~~-~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~-- 303 (424)
T PLN02855 229 LVASSHKMCGPTG--IGFLWGK-SDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLS-- 303 (424)
T ss_pred EEeecccccCCCc--cEEEEEc-hhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHH--
Confidence 9999999888666 8999997 77776653221 001223333 33344445554322
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhC-
Q 012785 339 CKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGN- 416 (456)
Q Consensus 339 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~- 416 (456)
+..+++.+++.++.++.+.+.|++++++++..+...- ....++++.+.+++ +.+.+.+.|.++
T Consensus 304 --------~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~-------~~~r~~~v~~~~~~~~~~~v~~~L~~~~ 368 (424)
T PLN02855 304 --------EIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSE-------GVGRAALCAFNVEGIHPTDLSTFLDQQH 368 (424)
T ss_pred --------HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccc-------ccCcccEEEEEECCcCHHHHHHHhcccC
Confidence 2245677788888888999999887655555332100 00123356666653 456788888766
Q ss_pred CEEeecCCCCCC-------CCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 417 KILTRSGKHFGF-------SPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 417 gI~v~pg~~fg~-------~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
||.++.|..+.. .++++|+|+.. +++|++.+++.|++++
T Consensus 369 gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~ 416 (424)
T PLN02855 369 GVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTI 416 (424)
T ss_pred CEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHH
Confidence 999999875421 24789999874 8999999999999875
No 158
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.90 E-value=3.5e-22 Score=200.04 Aligned_cols=272 Identities=13% Similarity=0.133 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhc--CCCCCCCcEEEEeCCCCCChhhhhh-hcCCe-----
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALS--SQDASEPISVVSAAPYYSSYPSITD-CVKSR----- 214 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~--~~gd~~~~~Vlv~~P~y~~~~~~~~-~~g~~----- 214 (456)
.++++.+++.+.. .+...+++++++++++..+++... .+++ +|++.+.+|++...... ..|.+
T Consensus 69 ~~~~~~la~~l~~-----~~~~~~~~~~SGseA~~~Al~~ar~~~~~~----~vv~~~~~yHg~~~~~~~~~~~~~~~~~ 139 (375)
T PRK04260 69 NSLQEEVAQKLIG-----DKDYLAFFCNSGAEANEAAIKIARKATGKQ----EIITFQNSFHGRTFGSMSATGQDKIKDG 139 (375)
T ss_pred CHHHHHHHHHHhc-----CcCCEEEEcCccHHHHHHHHHHHHHhcCCC----eEEEECCCcCcccHHHHhccCCcccCCC
Confidence 6788889987642 122356899999999999988764 2344 89999999997543322 11111
Q ss_pred ----E--eee--ccCcccccc---CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCC--CC
Q 012785 215 ----L--YKW--AGDAKRFNK---DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTS--IT 272 (456)
Q Consensus 215 ----~--~~~--~~d~~~l~~---~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~--~~ 272 (456)
+ +.+ ..|.+.++. .++.++++.+++|++|...+ ++|+++|+++|+||+|.+....+ ..
T Consensus 140 ~~~~~~~~~~~~~~dl~~l~~~l~~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~ 219 (375)
T PRK04260 140 FGDGVPHFSYAIFNDLNSVKALVNKNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYA 219 (375)
T ss_pred CCCCCCCeEEeCCCCHHHHHHhcCCCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhh
Confidence 1 111 125555543 35678889999999998754 27999999999999998643332 11
Q ss_pred ---CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhH
Q 012785 273 ---YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECF 349 (456)
Q Consensus 273 ---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~ 349 (456)
.....+ +.||||.++ +|+|+||++++ +++.+.+.......+++.+++.|.++.++|+.+.. +++
T Consensus 220 ~~~~~~~pd--i~t~sK~l~-~G~~ig~~~~~-~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~---------~~~ 286 (375)
T PRK04260 220 FEHYGIEPD--IFTLAKGLA-NGVPVGAMLAK-SSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLT---------AGF 286 (375)
T ss_pred hHhhCCCCC--EEEeccccc-CCcceEEEEEc-HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHh---------hHH
Confidence 011122 458999998 89999999997 88888886655567889999999999999986432 467
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCC
Q 012785 350 FEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFS 429 (456)
Q Consensus 350 l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~ 429 (456)
+++.++..+..++.+.+.+.+.+.+...+. .|. |+|++++.+...+.+.+.++||.+.|+ +
T Consensus 287 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~-------------~~~~~~~~~~~~~~~~l~~~Gi~v~~~-----~ 347 (375)
T PRK04260 287 LEQALENGNYLQEQLQKALQDKETVTTVRG-LGY-------------MIGIETTADLSQLVEAARDKGLIVLTA-----G 347 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeeEEec-cce-------------EEEEEecCcHHHHHHHHHhCCCEEecC-----C
Confidence 788888888888888888876643222221 233 799998656677888999999999874 3
Q ss_pred CCeEEEEec-C-ChhHHHHHHHHHHhhh
Q 012785 430 PKYVRISML-D-RDENYNLFVQRLSKIL 455 (456)
Q Consensus 430 ~~~iRis~~-~-~~e~i~~~l~~L~~~l 455 (456)
.+.+|++.. . +++++++++++|++++
T Consensus 348 ~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 348 TNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred CCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 578999984 3 8999999999998764
No 159
>PLN00144 acetylornithine transaminase
Probab=99.90 E-value=2e-22 Score=201.61 Aligned_cols=262 Identities=15% Similarity=0.092 Sum_probs=180.3
Q ss_pred CceEEEccCHHHHHHHHHHHhcCC----CCCC-------CcEEEEeCCCCCChhhhhhhcCCe---------------Ee
Q 012785 163 NHHIVVGTGSTQLFQAALYALSSQ----DASE-------PISVVSAAPYYSSYPSITDCVKSR---------------LY 216 (456)
Q Consensus 163 ~~~I~~t~G~~~al~~~~~~l~~~----gd~~-------~~~Vlv~~P~y~~~~~~~~~~g~~---------------~~ 216 (456)
.+.++++++++|+++.+++..... +... ..+|+...-+|++....+...... .+
T Consensus 72 ~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~ 151 (382)
T PLN00144 72 ADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFV 151 (382)
T ss_pred CCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEe
Confidence 358999999999999999876421 0000 127999999999987655543211 11
Q ss_pred eeccCcccccc----CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC-----CCCCCc
Q 012785 217 KWAGDAKRFNK----DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT-----YPADHD 278 (456)
Q Consensus 217 ~~~~d~~~l~~----~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~-----~~~~~~ 278 (456)
+++ |.+.++. .+++++++..-+||.|.... ++|+++|+++|+||+|.+..+.+.. ...+.+
T Consensus 152 ~~~-d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD 230 (382)
T PLN00144 152 EYG-NLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD 230 (382)
T ss_pred CCC-CHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC
Confidence 111 4444432 35567766544899544432 2899999999999999865443311 111122
Q ss_pred EEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHH
Q 012785 279 LMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMS 358 (456)
Q Consensus 279 i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~ 358 (456)
+.||||.++ +|+|+||++++ +++++.+.......+++.+++.+.++.+.|+.+.++ ...++++++.+.+
T Consensus 231 --i~t~sK~l~-~G~pig~v~~~-~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~------~~~~~~~~~g~~l- 299 (382)
T PLN00144 231 --IMTLAKPLA-GGLPIGAVLVT-EKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKP------GFLASVAKKGEYL- 299 (382)
T ss_pred --EEEeccccc-CCcceEEEEEc-HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhc------hHHHHHHHHHHHH-
Confidence 889999998 99999999997 899988876556678999999999999888877554 1344444444444
Q ss_pred HHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEec
Q 012785 359 TRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISML 438 (456)
Q Consensus 359 ~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~ 438 (456)
++.+.+.+.+.+.+.-.+. .|+ ++|+.+......+...+.++||.+.|+. . .+.||++.+
T Consensus 300 --~~~l~~~~~~~~~~~~vrg-~G~-------------~~~l~l~~~~~~~~~~~~~~Gv~i~~~~---~-~~~lrl~p~ 359 (382)
T PLN00144 300 --RELLRRKLGGNPHVKEVRG-VGL-------------LVGIQLDVPAGPLVDACRDSGLLVLTAG---K-GDVVRLVPP 359 (382)
T ss_pred --HHHHHHHHhhCCCceeeec-Cce-------------EEEEEecCccHHHHHHHHHCCeEEeecC---C-CCEEEEeCC
Confidence 4455555655543222222 344 7999885445678888899999999862 1 489999987
Q ss_pred C--ChhHHHHHHHHHHhhhC
Q 012785 439 D--RDENYNLFVQRLSKILS 456 (456)
Q Consensus 439 ~--~~e~i~~~l~~L~~~l~ 456 (456)
. +++++++++++|.++++
T Consensus 360 ~~~~~~~i~~~~~~l~~~l~ 379 (382)
T PLN00144 360 LVISEAELEQAVEILADCLP 379 (382)
T ss_pred CccCHHHHHHHHHHHHHHHH
Confidence 4 78999999999998763
No 160
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.90 E-value=3.2e-22 Score=200.33 Aligned_cols=275 Identities=16% Similarity=0.142 Sum_probs=195.4
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcC---CCCCCCcEEEEeCCCCCCh----hhhhhhcCCeE
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSS---QDASEPISVVSAAPYYSSY----PSITDCVKSRL 215 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~---~gd~~~~~Vlv~~P~y~~~----~~~~~~~g~~~ 215 (456)
.++++.++++++. .++++|++|+|+++++++++.++.. +|+ +|++++|+|+.. ...++..|+++
T Consensus 46 ~~~~~~la~~~~~-----~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~----~vl~~~~~~~~~~~~~~~~~~~~g~~~ 116 (373)
T cd06453 46 EAAREKVARFINA-----PSPDEIIFTRNTTEAINLVAYGLGRANKPGD----EIVTSVMEHHSNIVPWQQLAERTGAKL 116 (373)
T ss_pred HHHHHHHHHHhCC-----CCCCeEEEeCCHHHHHHHHHHHhhhcCCCCC----EEEECcchhHHHHHHHHHHHhhcCcEE
Confidence 5788888888864 1257899999999999999999987 888 999999999874 33455678888
Q ss_pred eeeccC------cccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcEE
Q 012785 216 YKWAGD------AKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHDLM 280 (456)
Q Consensus 216 ~~~~~d------~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i~ 280 (456)
+.++.| .+.++. .+++++++++|+||||.+.+ ++|+++|+++|+|++|..... ++. ...+.+++
T Consensus 117 ~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~-~~~~~~~~~d~~ 195 (373)
T cd06453 117 KVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHM-PVDVQDLGCDFL 195 (373)
T ss_pred EEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCce-eeeccccCCCEE
Confidence 776654 333332 36789999999999999977 378999999999999874322 221 22345788
Q ss_pred EecCccccCCCCceEEEEEEeCHHHHHHHHHHHhh---------------------ccCcCChHHHHHHHHHHHhhhCCC
Q 012785 281 LFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIEL---------------------NTIGVSKDSQLRAAKVLKVVSDSC 339 (456)
Q Consensus 281 i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~---------------------~~~~~s~~~q~~a~~~L~~~~~~~ 339 (456)
++|++|.++. .++||++++ +++++.+...... ....++.....++.++++.+.+
T Consensus 196 ~~s~~K~~~~--~g~g~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~-- 270 (373)
T cd06453 196 AFSGHKMLGP--TGIGVLYGK-EELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEK-- 270 (373)
T ss_pred EeccccccCC--CCcEEEEEc-hHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHH--
Confidence 8999999884 568999996 8888776653210 0112333344444445553322
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhCCE
Q 012785 340 KPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGNKI 418 (456)
Q Consensus 340 ~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~gI 418 (456)
.-++.++++.++.++++.+.|++++.+++..+.. ..++++++.++. +.+++.+.|.++||
T Consensus 271 --------~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~~l~~~gi 331 (373)
T cd06453 271 --------IGMEAIAAHEHELTAYALERLSEIPGVRVYGDAE-----------DRAGVVSFNLEGIHPHDVATILDQYGI 331 (373)
T ss_pred --------cCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCcc-----------ccCCeEEEEECCcCHHHHHHHHHHCCE
Confidence 2246677778888889999998876555542211 123366777754 56778888899999
Q ss_pred EeecCCCCCC-------CCCeEEEEecC--ChhHHHHHHHHH
Q 012785 419 LTRSGKHFGF-------SPKYVRISMLD--RDENYNLFVQRL 451 (456)
Q Consensus 419 ~v~pg~~fg~-------~~~~iRis~~~--~~e~i~~~l~~L 451 (456)
.+.+|..+.. .+++||+|+.. ++++++++++.|
T Consensus 332 ~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 332 AVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred EeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 9998875421 26799999974 899999998764
No 161
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.90 E-value=1.6e-22 Score=204.26 Aligned_cols=266 Identities=16% Similarity=0.155 Sum_probs=186.6
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcC--------CCCCCCcEEEEeCCCCCChhhhhhhcCCe
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSS--------QDASEPISVVSAAPYYSSYPSITDCVKSR 214 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~--------~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~ 214 (456)
.+|.+.++++. ..+++++++++++|++.+++.... +.. +|+..+.+|++....+...+..
T Consensus 84 ~~la~~l~~~~--------~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~----~ii~~~~~yHG~t~~~~~~~~~ 151 (406)
T PRK12381 84 LRLAKKLIDAT--------FADRVFFCNSGAEANEAALKLARKYAHDRYGSHKS----GIVAFKNAFHGRTLFTVSAGGQ 151 (406)
T ss_pred HHHHHHHHhhC--------CCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCC----eEEEECCCcCCcchhHHhhcCC
Confidence 45555555543 235899999999999999998632 223 8999999999987655443321
Q ss_pred -------------Eeeec-cCcccccc---CCCeEEEEcCCCCCCcccch----------HHhhhcCcEEEeeecCCCCC
Q 012785 215 -------------LYKWA-GDAKRFNK---DGPYIELVTSPNNPDGSVRQ----------SVVNRSGGILVHDLAYYWPQ 267 (456)
Q Consensus 215 -------------~~~~~-~d~~~l~~---~~~~~i~v~~P~NPtG~~~~----------~l~~~~~~~iI~De~y~~~~ 267 (456)
+..++ .|.+.++. .+++++++ +|.||+|.+++ ++|++||+++|+||+|.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~g 230 (406)
T PRK12381 152 PKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVG 230 (406)
T ss_pred cccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCC
Confidence 11121 24444442 35666766 79999987653 28999999999999998654
Q ss_pred CCCCCC---C--CCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCC
Q 012785 268 YTSITY---P--ADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPS 342 (456)
Q Consensus 268 ~~~~~~---~--~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~ 342 (456)
+.+... . ...+ +.||||.++ +|+|+||++++ +++++.+.......+++.+++.|.++.+.|+.+.++
T Consensus 231 r~G~~~~~~~~~v~pD--i~t~sK~l~-gG~~ig~~~~~-~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~---- 302 (406)
T PRK12381 231 RTGELYAYMHYGVTPD--VLTTAKALG-GGFPIGAMLTT-EKCASVMTVGTHGTTYGGNPLASAVAGKVLELINTP---- 302 (406)
T ss_pred CCcchhhhHhhCCCCC--EEEehhhhh-CCCceEEEEEc-HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhc----
Confidence 433111 1 1122 469999999 99999999997 899988876555568899999999999988854322
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhcC-Ccc-ccCCCCcccccccccCCCCCceEEeecCc----cHHHHHHHHHhC
Q 012785 343 GSEDECFFEFTNHQMSTRWKQLRMAVQKSG-LFS-VPELPSQFCTFLGRAFEPQPAFAWLKCEQ----EIEDCESFLKGN 416 (456)
Q Consensus 343 ~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~-~~~-~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----~~~~~~~~l~~~ 416 (456)
..+++++++.+++.+.|+++. ... +.... ..+.++|+.++. ....+.+.++++
T Consensus 303 ---------~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vr------------g~Gl~~~~~l~~~~~~~~~~~~~~l~~~ 361 (406)
T PRK12381 303 ---------EMLNGVKQRHDWFVERLNTINARYGLFSEIR------------GLGLLIGCVLNAEYAGKAKQISQEAAKA 361 (406)
T ss_pred ---------cHHHHHHHHHHHHHHHHHHHHhhCCCEEEEe------------cCeEEEEEEecCchhhHHHHHHHHHHHC
Confidence 356778888888888887652 111 11111 112267887753 245677889999
Q ss_pred CEEeecCCCCCCCCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 417 KILTRSGKHFGFSPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 417 gI~v~pg~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
||.+.+. +++.+|++++ .+++++++++++|++++
T Consensus 362 Gv~v~~~-----g~~~lRl~p~~~~t~~~i~~~~~~l~~~l 397 (406)
T PRK12381 362 GVMVLIA-----GPNVVRFAPALNISEEEITTGLDRFARAC 397 (406)
T ss_pred CcEEeeC-----CCCEEEEeCCccCCHHHHHHHHHHHHHHH
Confidence 9999863 2579999876 48999999999998876
No 162
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.90 E-value=3.9e-22 Score=202.38 Aligned_cols=269 Identities=14% Similarity=0.076 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhc--CCCCCCCcEEEEeCCCCCChhhhhhhcC--------
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALS--SQDASEPISVVSAAPYYSSYPSITDCVK-------- 212 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~--~~gd~~~~~Vlv~~P~y~~~~~~~~~~g-------- 212 (456)
.+|++.++++++. ..+++++++|+++++..+++.+. .+++ +|++.+|+|++........+
T Consensus 82 ~~l~~~l~~~~~~------~~~~v~~~~sgsea~~~al~~~~~~~~~~----~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 151 (413)
T cd00610 82 VELAELLLALTPE------GLDKVFFVNSGTEAVEAALKLARAYTGRK----KIISFEGAYHGRTLGALSLTGSKKYRGG 151 (413)
T ss_pred HHHHHHHHHhCCC------CCCEEEEcCcHHHHHHHHHHHHHHHcCCC----eEEEECCCcCCccHHHHHhcCCcccccc
Confidence 4455555555432 35699999999999999999874 4667 99999999999765544432
Q ss_pred -----CeEeeecc------------Ccccccc------CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEee
Q 012785 213 -----SRLYKWAG------------DAKRFNK------DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHD 260 (456)
Q Consensus 213 -----~~~~~~~~------------d~~~l~~------~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~D 260 (456)
.+++.++. |.+.++. .++++++++..+|++|..++ ++|+++++++|+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~D 231 (413)
T cd00610 152 FGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIAD 231 (413)
T ss_pred CCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 12333333 3444432 13455555444667798764 2789999999999
Q ss_pred ecCCCCCCCCC--C-CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHH--HHHHhhccCcCChHHHHHHHHHHHhh
Q 012785 261 LAYYWPQYTSI--T-YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKM--TKYIELNTIGVSKDSQLRAAKVLKVV 335 (456)
Q Consensus 261 e~y~~~~~~~~--~-~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l--~~~~~~~~~~~s~~~q~~a~~~L~~~ 335 (456)
|+|.+....+. . ...+...-+.||||.++ .|+|+||++++ +++++.+ .......+++.+++.|.++.+.|+.+
T Consensus 232 ev~~g~g~~g~~~~~~~~~~~~d~~t~sK~l~-~g~~~g~~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l 309 (413)
T cd00610 232 EVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLG-GGLPLGAVLGR-EEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVL 309 (413)
T ss_pred ccccCCCcCcchhhHhhcCCCCCeEEEccccc-CccccEEEEEc-HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99986422221 1 11121222568999999 68999999996 8888886 33444467889999999998888754
Q ss_pred hCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcC----CccccCCCCcccccccccCCCCCceEEeecCc-------
Q 012785 336 SDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSG----LFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ------- 404 (456)
Q Consensus 336 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~------- 404 (456)
.+. ...++++++++.+.+.|++.. ......+. +.++|+.++.
T Consensus 310 ~~~-------------~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~--------------g~~~~~~~~~~~~~~~~ 362 (413)
T cd00610 310 EEE-------------GLLENAAELGEYLRERLRELAEKHPLVGDVRGR--------------GLMIGIELVKDRATKPP 362 (413)
T ss_pred Hhc-------------cHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecC--------------ceEEEEEEecCCCcCCc
Confidence 332 345556666666666666542 11111222 2367777642
Q ss_pred ---cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 405 ---EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 405 ---~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
....+.+.|.++||.+.|+. .+.+|++++. +++++++++++|++++
T Consensus 363 ~~~~~~~~~~~l~~~gv~v~~~~-----~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 363 DKELAAKIIKAALERGLLLRPSG-----GNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred chHHHHHHHHHHHHCCeEEeecC-----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 24567788889999999964 5789998764 8899999999998864
No 163
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.90 E-value=2e-22 Score=204.92 Aligned_cols=273 Identities=12% Similarity=0.116 Sum_probs=188.9
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcC--CCCCCCcEEEEeCCCCCChhhhhhhc---CC---
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSS--QDASEPISVVSAAPYYSSYPSITDCV---KS--- 213 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~--~gd~~~~~Vlv~~P~y~~~~~~~~~~---g~--- 213 (456)
..+|+++|++++.. .++|++++|++++++.+++.... ..+ +|+..+|+|+++...+... +.
T Consensus 90 ~~~lae~l~~~~~~-------~~~v~~~~sGseA~e~Alk~ar~~~gr~----~ii~~~~~yhG~~~~~~~~~~~~~~~~ 158 (423)
T TIGR00713 90 EILLAKEIISRVPS-------VEMVRFVNSGTEATMSAVRLARGYTGRD----KIIKFEGCYHGHHDALLVKAGSGAATL 158 (423)
T ss_pred HHHHHHHHHHhCCc-------ccEEEEeCCHHHHHHHHHHHHHHhhCCC----EEEEEcCCCCCChhhhhccccCccccc
Confidence 48999999988743 25899999999999999986533 334 9999999999986533321 10
Q ss_pred --------------eEeeec-cCcccccc------CCCeEEEE-cCCCCCCcccch---------HHhhhcCcEEEeeec
Q 012785 214 --------------RLYKWA-GDAKRFNK------DGPYIELV-TSPNNPDGSVRQ---------SVVNRSGGILVHDLA 262 (456)
Q Consensus 214 --------------~~~~~~-~d~~~l~~------~~~~~i~v-~~P~NPtG~~~~---------~l~~~~~~~iI~De~ 262 (456)
..+.++ .|.+.++. .+++++++ +.|+| +|.+.+ ++|+++|+++|+||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv 237 (423)
T TIGR00713 159 GLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEV 237 (423)
T ss_pred CCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEcc
Confidence 011111 14444432 34567777 57888 787766 279999999999999
Q ss_pred CCCCCCCCC--C--CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHH---HHhhccCcCChHHHHHHHHHHHhh
Q 012785 263 YYWPQYTSI--T--YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTK---YIELNTIGVSKDSQLRAAKVLKVV 335 (456)
Q Consensus 263 y~~~~~~~~--~--~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~---~~~~~~~~~s~~~q~~a~~~L~~~ 335 (456)
|.+..+... . .....+ +.||||.++ +|+|+||++++ +++++.+.. .....+++.++++|.++.+.|+.+
T Consensus 238 ~~g~r~g~~~~~~~~~~~pD--i~t~sK~l~-~G~pig~v~~~-~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~ 313 (423)
T TIGR00713 238 MTGFRVALGGAQEYFGVEPD--LTTLGKIIG-GGLPVGAFGGR-REIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLL 313 (423)
T ss_pred ccccccCcchhHHHhCCCcc--hhhhhhhhc-CCCceeeeeEH-HHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHH
Confidence 986421100 0 011112 348999999 99999999997 899888863 224468899999999999999866
Q ss_pred hCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc----------c
Q 012785 336 SDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----------E 405 (456)
Q Consensus 336 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----------~ 405 (456)
.+. .+++..++..+..++.+.+.+++++.....+..|++. ++++..+. +
T Consensus 314 ~~~---------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~------------~v~~~~~~~~~~~~~~~~~ 372 (423)
T TIGR00713 314 DEE---------GVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMF------------SLFFTEEEVTNYADAKKSD 372 (423)
T ss_pred hcc---------cHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEE------------EEEEecCCCCChhhhhccc
Confidence 442 3677778888888888888888775332233455541 24443211 1
Q ss_pred ---HHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 406 ---IEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 406 ---~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
...+.+.+.++||.+.++ .| +.+|++...+++++++++++|.++++
T Consensus 373 ~~~~~~~~~~l~~~Gv~v~~~-~~----~~~~l~~~~t~~~i~~~~~~l~~~l~ 421 (423)
T TIGR00713 373 TELFAKFFHEMLDKGVFLPPS-QF----EACFLSAAHTEEDIENTIEAAEEVFA 421 (423)
T ss_pred HHHHHHHHHHHHHCCeEEecC-Cc----cceeeECCCCHHHHHHHHHHHHHHHh
Confidence 124666777899998763 22 35789887799999999999998863
No 164
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=1.4e-21 Score=195.96 Aligned_cols=204 Identities=15% Similarity=0.178 Sum_probs=155.9
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhh----hhhhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPS----ITDCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~----~~~~~g~~~~~ 217 (456)
..+|++.+|++.+. +..++++++++++.+++.+++.+|| +|+++.|+|..... .+...|+++..
T Consensus 66 ~~~le~~lA~l~g~--------~~~i~~ssG~~Ai~~~l~all~~GD----~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~ 133 (398)
T PRK08249 66 VQAFEEKVRILEGA--------EAATAFSTGMAAISNTLYTFLKPGD----RVVSIKDTYGGTNKIFTEFLPRMGVDVTL 133 (398)
T ss_pred HHHHHHHHHHHhCC--------CeEEEeCChHHHHHHHHHHhcCCCC----EEEEcCCchHHHHHHHHHHHhhCCeEEEE
Confidence 47899999999863 3456666668999999999999999 99999999987543 34567888776
Q ss_pred ecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCC-CCCCCCCCCcEEEecCccc
Q 012785 218 WAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQY-TSITYPADHDLMLFTVSKS 287 (456)
Q Consensus 218 ~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~-~~~~~~~~~~i~i~S~SK~ 287 (456)
++. |.+.++. .++++|++++|+||||.+++ ++|+++|+++|+|++|..+.. .++ ..+.+++++|+||.
T Consensus 134 vd~~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l--~~~~Divv~S~sK~ 211 (398)
T PRK08249 134 CETGDHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQNPL--ALGADLVIHSATKF 211 (398)
T ss_pred cCCCCHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCCch--hhCCCEEeccCcee
Confidence 553 5555543 36899999999999999987 488999999999999985422 222 23456899999999
Q ss_pred cCCCCceE-EEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 012785 288 TGHAGTRI-GWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRM 366 (456)
Q Consensus 288 ~g~~G~Ri-G~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 366 (456)
+|.+|.++ ||++. +++++++++..+.....+.+++.+..+...++ .+....++..++++.+.+
T Consensus 212 l~g~~~~~gG~vv~-~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~---------------tL~~R~~~~~~na~~la~ 275 (398)
T PRK08249 212 LSGHADALGGVVCG-SKELMEQVYHYREINGATMDPMSAYLILRGMK---------------TLKLRVRQQQESAMALAK 275 (398)
T ss_pred cCCCCCceEEEEEC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcc---------------hHHHHHHHHHHHHHHHHH
Confidence 98778887 55555 58999999888776677778877777666554 344455667788889999
Q ss_pred HHHhcCCcc
Q 012785 367 AVQKSGLFS 375 (456)
Q Consensus 367 ~L~~~~~~~ 375 (456)
.|++++.+.
T Consensus 276 ~L~~~p~v~ 284 (398)
T PRK08249 276 YLQTHPKVE 284 (398)
T ss_pred HHHcCCCee
Confidence 999887554
No 165
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.90 E-value=1.2e-21 Score=197.91 Aligned_cols=285 Identities=13% Similarity=0.110 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHh---cCCCCCCCcEEEEeCCCCCChh----hhhhhcCCeE
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYAL---SSQDASEPISVVSAAPYYSSYP----SITDCVKSRL 215 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l---~~~gd~~~~~Vlv~~P~y~~~~----~~~~~~g~~~ 215 (456)
.++|+.++++++. ++++|++++|+++++..++.++ .++|| +|++.+|.|+... ..++..|+++
T Consensus 63 ~~l~~~ia~~~~~------~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd----~vl~~~~~~~s~~~~~~~~~~~~g~~~ 132 (397)
T TIGR01976 63 DDAREAVADLLNA------DPPEVVFGANATSLTFLLSRAISRRWGPGD----EVIVTRLDHEANISPWLQAAERAGAKV 132 (397)
T ss_pred HHHHHHHHHHcCC------CCCeEEEeCCHHHHHHHHHHHHHhcCCCCC----EEEEcCCchHhHHHHHHHHHHhcCCEE
Confidence 5888888888864 3457999999999998887776 57899 9999999887643 4556789988
Q ss_pred eeeccCc-------ccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcE
Q 012785 216 YKWAGDA-------KRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHDL 279 (456)
Q Consensus 216 ~~~~~d~-------~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i 279 (456)
..++.|. +.++. .+++++++++|+||||.+.+ ++|+++|+++|+|+++.... .++. ...+.++
T Consensus 133 ~~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~-~~~~~~~~~~d~ 211 (397)
T TIGR01976 133 KWARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPH-GLIDVQATGADF 211 (397)
T ss_pred EEEeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccc-cCCCHHHcCCCE
Confidence 8766543 33322 35789999999999999977 37899999999999986321 1221 2235678
Q ss_pred EEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhcc----------CcCChHHHHHHHHHHHhhhCCCC-CCC---Cc
Q 012785 280 MLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNT----------IGVSKDSQLRAAKVLKVVSDSCK-PSG---SE 345 (456)
Q Consensus 280 ~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~----------~~~s~~~q~~a~~~L~~~~~~~~-~~~---~~ 345 (456)
+++|++|.+| .|+||++++ +++++.+........ ...+.....++.++++.+.+... ... ..
T Consensus 212 ~~~s~~K~~g---~~~G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~ 287 (397)
T TIGR01976 212 LTCSAYKFFG---PHMGILWGR-PELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRER 287 (397)
T ss_pred EEEechhhcC---CceEEEEEc-HHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhh
Confidence 8899999875 469999996 888777654322111 11222222223333332212100 000 00
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhCCEEeecCC
Q 012785 346 DECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGNKILTRSGK 424 (456)
Q Consensus 346 ~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~gI~v~pg~ 424 (456)
..+.+++.+++..+.++++.+.|++++.+.+..+.-+ ...++++.+.+++ +.+.+.+.|.++||.++.|.
T Consensus 288 ~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~ 358 (397)
T TIGR01976 288 LVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARL---------AARVPTVSFTVHGLPPQRVVRRLADQGIDAWAGH 358 (397)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCc---------cCCCceEEEEeCCcCHHHHHHHHHHCCeEEEeCc
Confidence 0113567778888888889898888765555432100 1133456666653 45678888999999999987
Q ss_pred CCC----------CCCCeEEEEecC--ChhHHHHHHHHH
Q 012785 425 HFG----------FSPKYVRISMLD--RDENYNLFVQRL 451 (456)
Q Consensus 425 ~fg----------~~~~~iRis~~~--~~e~i~~~l~~L 451 (456)
.|. ...+++|||+.. ++++++.+++.|
T Consensus 359 ~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 359 FYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred cchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 663 135689999864 888999988764
No 166
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=2.6e-21 Score=192.73 Aligned_cols=253 Identities=14% Similarity=0.116 Sum_probs=179.2
Q ss_pred ccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhh
Q 012785 129 SYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSIT 208 (456)
Q Consensus 129 ~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~ 208 (456)
++|+.+. ...|++++|++.+ .+++++|+|+++++.+++.+++++|| +|+++.|+|......+
T Consensus 48 ~R~~npt------~~~Le~~lA~leg--------~e~ivvt~gg~~Ai~~~l~all~~Gd----~Il~~~~~y~~~~~~~ 109 (388)
T PRK08861 48 TRSGNPN------RGLLEQTLSELES--------GKGAVVTNCGTSALNLWVSALLGPDD----LIVAPHDCYGGTYRLF 109 (388)
T ss_pred cCCCCch------HHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHcCCCC----EEEEcCCchHHHHHHH
Confidence 4566665 4899999999986 36999999999999999999999999 9999999998644332
Q ss_pred ----hhcCCeEeeecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC-CCCCCCC
Q 012785 209 ----DCVKSRLYKWAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ-YTSITYP 274 (456)
Q Consensus 209 ----~~~g~~~~~~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~-~~~~~~~ 274 (456)
...|+++..++. |.+.++. .++++|++++|+||||.+++ ++|+++|+++|+|++|..+. ..++ .
T Consensus 110 ~~~~~~~gi~v~~vd~~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl--~ 187 (388)
T PRK08861 110 NTRANKGDFKVQFVDQSDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKPL--E 187 (388)
T ss_pred HHHHhcCCeEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCCCc--c
Confidence 234667666543 4555543 37899999999999999987 37889999999999998542 2333 2
Q ss_pred CCCcEEEecCccccC-CCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHH
Q 012785 275 ADHDLMLFTVSKSTG-HAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFT 353 (456)
Q Consensus 275 ~~~~i~i~S~SK~~g-~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~ 353 (456)
.+-+++++|++|.++ +.+++.|+++++++++.++++..+.......+++....+...|+ .+.-.
T Consensus 188 ~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~---------------Tl~lR 252 (388)
T PRK08861 188 LGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIR---------------TLGAR 252 (388)
T ss_pred cCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcCC---------------CHHHH
Confidence 345799999999886 45688999988667888888877776677788888776666555 24445
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCCcc----cccccccCCCCCceEEeecCccHHHHHHHHHhC
Q 012785 354 NHQMSTRWKQLRMAVQKSGLFSVPELPSQF----CTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGN 416 (456)
Q Consensus 354 ~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~----~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~ 416 (456)
.++..++...+.+.|+.++.+.....+|.- ....++.....+..+.+.++++.+.+.+.+..-
T Consensus 253 ~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l 319 (388)
T PRK08861 253 MRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKAL 319 (388)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcC
Confidence 566677888899999998765432222211 011112222234456667754444444444433
No 167
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.90 E-value=2.2e-21 Score=193.50 Aligned_cols=284 Identities=15% Similarity=0.159 Sum_probs=195.5
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhh----hhhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSI----TDCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~----~~~~g~~~~~ 217 (456)
..+|++.++++.+. +..++++++++|+..++.+++++|| +|+++.+.|...... ++..|.++..
T Consensus 42 ~~~le~~la~l~g~--------~~a~~~~sG~~Ai~~~l~~l~~~gd----~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~ 109 (369)
T cd00614 42 VDALEKKLAALEGG--------EAALAFSSGMAAISTVLLALLKAGD----HVVASDDLYGGTYRLFERLLPKLGIEVTF 109 (369)
T ss_pred HHHHHHHHHHHHCC--------CCEEEEcCHHHHHHHHHHHHcCCCC----EEEECCCCcchHHHHHHHHHhhcCeEEEE
Confidence 48999999998863 3566677778999999999999999 999999999986643 4466888877
Q ss_pred eccC-cccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCC-CCCCCCCCCcEEEecCccc
Q 012785 218 WAGD-AKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQY-TSITYPADHDLMLFTVSKS 287 (456)
Q Consensus 218 ~~~d-~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~-~~~~~~~~~~i~i~S~SK~ 287 (456)
++.+ .+.++. .++++|++++|+||+|.+.+ ++|+++|+++|+|++|..+.. .++ ..+.+++++|+||.
T Consensus 110 v~~~d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~~~~--~~g~Divv~S~tK~ 187 (369)
T cd00614 110 VDPDDPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQRPL--ELGADIVVHSATKY 187 (369)
T ss_pred eCCCCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcCChh--hhCCcEEEecccee
Confidence 7664 444432 36799999999999999977 478999999999999985432 222 23568999999999
Q ss_pred cCCCC-ceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 012785 288 TGHAG-TRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRM 366 (456)
Q Consensus 288 ~g~~G-~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 366 (456)
++.+| ++.||+++++++++++++........+.+++.+.++...|+ .+....++..++.+.+.+
T Consensus 188 l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~---------------tl~~r~~~~~~na~~la~ 252 (369)
T cd00614 188 IGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLK---------------TLPLRMERHSENALKVAE 252 (369)
T ss_pred ccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCC---------------CHHHHHHHHHHHHHHHHH
Confidence 97665 89999999744899999887765666777777666555443 233456667788889999
Q ss_pred HHHhcCCccccCCCCc----ccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEe---ecC------------CCC-
Q 012785 367 AVQKSGLFSVPELPSQ----FCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILT---RSG------------KHF- 426 (456)
Q Consensus 367 ~L~~~~~~~~~~~~g~----~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v---~pg------------~~f- 426 (456)
.|++++.+.....++. .+....+.....+..+-+.++++.+...+.+..-.+.. .-| .+.
T Consensus 253 ~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~ 332 (369)
T cd00614 253 FLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVESLVEHPASMTHSQ 332 (369)
T ss_pred HHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCceeeeCCccccccc
Confidence 9998875432221110 00000111223345566677544455555555555442 111 111
Q ss_pred ---------CCCCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 427 ---------GFSPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 427 ---------g~~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
|..++.+|+|++. |+.+.+++.|.+.|+
T Consensus 333 ~~~~~~~~~g~~~~liR~svGl--E~~~dl~~dl~~al~ 369 (369)
T cd00614 333 LPPEERAAAGITPGLVRLSVGI--EDVEDLIADLEQALK 369 (369)
T ss_pred CCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhhC
Confidence 2235789999965 566777888877764
No 168
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.89 E-value=1.4e-21 Score=198.53 Aligned_cols=275 Identities=12% Similarity=0.022 Sum_probs=187.5
Q ss_pred HHHHHHHH-HhcCccCCCceEEEccCHHHHHHHHHHHhcC--CCCCCCcEEEEeCCCCCChhhhhhhcCCeEe-------
Q 012785 147 KEVVRLHK-VVGNAITENHHIVVGTGSTQLFQAALYALSS--QDASEPISVVSAAPYYSSYPSITDCVKSRLY------- 216 (456)
Q Consensus 147 ~aia~~~~-~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~--~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~------- 216 (456)
..+++.+. ..+.... ++++++++++++++.+++.... ... +|+...|+|++....+...+....
T Consensus 87 ~~la~~l~~~~~~~~~--~~~~f~~sGsea~e~Alklar~~~~r~----~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~ 160 (425)
T PRK08088 87 LELCEKMNQKVPGDFA--KKTLLVTTGSEAVENAVKIARAATKRS----GVIAFTGAYHGRTHYTLALTGKVNPYSAGMG 160 (425)
T ss_pred HHHHHHHHHhCCCCCC--CEEEEeCCcHHHHHHHHHHHHHHhCCC----eEEEECCccCCccHHHHHhhCCCCccccCCC
Confidence 35666663 3332221 3666666666777777765532 122 688889999999877766543211
Q ss_pred ---------eeccCc---------cccc--------cCCCeEEEEcC-CCCCCcccch--------HHhhhcCcEEEeee
Q 012785 217 ---------KWAGDA---------KRFN--------KDGPYIELVTS-PNNPDGSVRQ--------SVVNRSGGILVHDL 261 (456)
Q Consensus 217 ---------~~~~d~---------~~l~--------~~~~~~i~v~~-P~NPtG~~~~--------~l~~~~~~~iI~De 261 (456)
.++.+. +.++ ..+..++++.. .+||.+...+ ++|+++++++|+||
T Consensus 161 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~De 240 (425)
T PRK08088 161 LMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADE 240 (425)
T ss_pred CCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 122111 1121 12345555533 3677555555 38999999999999
Q ss_pred cCCCCCCCCCC---CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCC
Q 012785 262 AYYWPQYTSIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDS 338 (456)
Q Consensus 262 ~y~~~~~~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~ 338 (456)
+|.+..+.+-. ...+.+..+.||||.++ +|+|+||++++ +++++.+.......+++.+++.|.++.++|+....
T Consensus 241 v~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~-~G~rig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~- 317 (425)
T PRK08088 241 VQTGAGRTGTLFAMEQMGVAADLTTFAKSIA-GGFPLAGVTGR-AEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQ- 317 (425)
T ss_pred cccCCCcCcchhHHhhcCCCCCEEEEecccc-CCCcceeeEec-HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHh-
Confidence 99975443311 12334556899999999 99999999997 99999888777777899999999999999996532
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC--------c--cHHH
Q 012785 339 CKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE--------Q--EIED 408 (456)
Q Consensus 339 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~--------~--~~~~ 408 (456)
++++++.++..+++++.+.+.+++.+.+....+. |+ ++|+.+. . ....
T Consensus 318 --------~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~-------------~~~l~l~~~~~~~~p~~~~~~~ 375 (425)
T PRK08088 318 --------ENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL-GA-------------MIAIELFEDGDHSKPNAKLTAQ 375 (425)
T ss_pred --------cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ce-------------EEEEEEecCCCCCCCCHHHHHH
Confidence 4677778877777777777666665543223333 33 6899872 1 1456
Q ss_pred HHHHHHhCCEEeecCCCCCCCCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 409 CESFLKGNKILTRSGKHFGFSPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 409 ~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
+.+.+.++||.+.|+..| .+.||++++. +++++++++++|++.+
T Consensus 376 l~~~~~~~Gv~~~~~~~~---~~~iRl~~~~~~t~~ei~~~i~~l~~~l 421 (425)
T PRK08088 376 IVARARDKGLILLSCGPY---YNVLRILVPLTIEDAQIRQGLEIIAQCF 421 (425)
T ss_pred HHHHHHhCCCEEecCCCC---CCEEEEECCCCcCHHHHHHHHHHHHHHH
Confidence 778888999999886544 4789999983 7999999999999876
No 169
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.89 E-value=1.2e-21 Score=196.68 Aligned_cols=283 Identities=12% Similarity=0.145 Sum_probs=198.7
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhc-----CC-CCCCCcEEEEeCCCCCChhh---hhhhcC
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALS-----SQ-DASEPISVVSAAPYYSSYPS---ITDCVK 212 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~-----~~-gd~~~~~Vlv~~P~y~~~~~---~~~~~g 212 (456)
.+.+++++++++...+. .++++|++|+|++++++.+++++. ++ ++ +|++..+.|+.+.. .++..|
T Consensus 41 ~~~l~~a~~~~~~~~~~--~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~----~vi~~~~e~ps~~~~~~~~~~~G 114 (382)
T TIGR03403 41 HPAIAEALDKLYKGINA--RDLDDIIITSCATESNNWVLKGVYFDEILKGGKN----HIITTEVEHPAVRATCAFLESLG 114 (382)
T ss_pred HHHHHHHHHHHHHHcCc--CCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCC----EEEEcCCccHHHHHHHHHHHHCC
Confidence 47899999988865443 235799999999999999998762 44 45 79998866655544 455679
Q ss_pred CeEeeeccCc------ccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCC
Q 012785 213 SRLYKWAGDA------KRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADH 277 (456)
Q Consensus 213 ~~~~~~~~d~------~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~ 277 (456)
++++.++.|. +.++. .+++++++++||||||.+++ ++|+++|+++|+|+++..... ++. ...+-
T Consensus 115 ~~v~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~-~~~~~~~~~ 193 (382)
T TIGR03403 115 VEVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKI-PVDVQKAGV 193 (382)
T ss_pred CEEEEEecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCC-ccCccccCC
Confidence 9988777643 33322 25789999999999999987 378999999999999874322 222 22345
Q ss_pred cEEEecCccccCCCCceEEEEEEeCHHHH--HHHH---HHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHH
Q 012785 278 DLMLFTVSKSTGHAGTRIGWALVKDMEVA--KKMT---KYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEF 352 (456)
Q Consensus 278 ~i~i~S~SK~~g~~G~RiG~l~~~~~~~~--~~l~---~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~ 352 (456)
++++.|++|.+|.+| +|++++. +... ..+. .........++...+.++.+.++.. .++++.
T Consensus 194 D~~~~s~~K~~gp~G--~g~l~vr-~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~-----------~~~~~~ 259 (382)
T TIGR03403 194 DFLSFSAHKFHGPKG--VGGLYIR-KGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLA-----------NEYLDF 259 (382)
T ss_pred CEEEEcchhhCCCCc--eEEEEEC-CCCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHH-----------HHhHHH
Confidence 699999999988888 5888875 3220 1010 0001123456777777777777632 345777
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhCCEEeecCCCCC----
Q 012785 353 TNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGNKILTRSGKHFG---- 427 (456)
Q Consensus 353 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~gI~v~pg~~fg---- 427 (456)
..+++++.++.+.+.|++++++.+..+... ..++++.+.++. +.+.+...|.++||.++.|+.|.
T Consensus 260 ~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~ 329 (382)
T TIGR03403 260 EKSHVRRLRDRLEDALLELPDVFVVGDREH----------RVPNTILISIKGVEGEAMLWDLNKAGIAASTGSACASEDL 329 (382)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEECCCCC----------CcCCEEEEEeCCCCHHHHHHhhccCCEEEEchhccCCCCC
Confidence 888999999999999988776666543210 123355566653 45667777889999999887652
Q ss_pred ----------C----CCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 428 ----------F----SPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 428 ----------~----~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
. ..+.||+|+.. +++|++++++.|++++
T Consensus 330 ~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~ 373 (382)
T TIGR03403 330 EANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAV 373 (382)
T ss_pred CcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 1 12579999875 8999999999998875
No 170
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.89 E-value=4.7e-21 Score=191.50 Aligned_cols=282 Identities=12% Similarity=0.090 Sum_probs=195.9
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCCh--hhhhhhcCCeEeeec
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSY--PSITDCVKSRLYKWA 219 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~--~~~~~~~g~~~~~~~ 219 (456)
..++++.++++++. +. ..+.|+++.|+++++..++..+..++| +|+++.++|.+. ...++..|+++..++
T Consensus 39 ~~~~~~~l~~l~~~---~~-~~~~i~~~~~gt~~l~~~~~~l~~~~~----~vlv~~~~~~~~~~~~~~~~~g~~~~~i~ 110 (368)
T PRK13479 39 TASVRAKLVAIATG---EE-GYTCVPLQGSGTFSVEAAIGSLVPRDG----KVLVPDNGAYGARIAQIAEYLGIAHVVLD 110 (368)
T ss_pred HHHHHHHHHHHhCC---CC-CceEEEEcCCcHHHHHHHHHhccCCCC----eEEEEeCCchHHHHHHHHHHcCCcEEEEE
Confidence 47888888888763 11 125688999999999999999999998 899998888776 377788899888766
Q ss_pred cC------cccccc-----CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcEEEe
Q 012785 220 GD------AKRFNK-----DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHDLMLF 282 (456)
Q Consensus 220 ~d------~~~l~~-----~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i~i~ 282 (456)
.+ .+.++. .+++++++++|+||||...+ ++|+++++++|+|+++.. +..++. ...+.++++.
T Consensus 111 ~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~-g~~~~~~~~~~~d~~v~ 189 (368)
T PRK13479 111 TGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSF-GAIPIDIAELGIDALIS 189 (368)
T ss_pred CCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEccccc-CCccccccccCceEEEe
Confidence 54 233322 23567889999999999977 488999999999965542 222232 2224568889
Q ss_pred cCcccc-CCCCceEEEEEEeCHHHHHHHHHHHh-----------------hccCcCChHHHHHHHHHHHhhhCCCCCCCC
Q 012785 283 TVSKST-GHAGTRIGWALVKDMEVAKKMTKYIE-----------------LNTIGVSKDSQLRAAKVLKVVSDSCKPSGS 344 (456)
Q Consensus 283 S~SK~~-g~~G~RiG~l~~~~~~~~~~l~~~~~-----------------~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~ 344 (456)
|++|.+ |.+| +||++++ +++++.+..... ...++++...+.++.++++.+.+
T Consensus 190 s~~K~l~g~~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~------- 259 (368)
T PRK13479 190 SANKCIEGVPG--FGFVIAR-RSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEE------- 259 (368)
T ss_pred cCccccccCCC--ceEEEEC-HHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHH-------
Confidence 999965 6778 6999997 888777654321 11135666666666666664322
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC--ccHHHHHHHHHhCCEEeec
Q 012785 345 EDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE--QEIEDCESFLKGNKILTRS 422 (456)
Q Consensus 345 ~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~--~~~~~~~~~l~~~gI~v~p 422 (456)
+..+++.+++++++++.+.+.|++++ +.+..+.. .. .+....+++... .+.+.+.+.|.++||.+++
T Consensus 260 --~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~ 328 (368)
T PRK13479 260 --EGGVPARGARYANNQRTLVAGMRALG-FEPLLDAE-IQ-------SPIIVTFHAPADPAYDFKEFYERLKEQGFVIYP 328 (368)
T ss_pred --hhCHHHHHHHHHHHHHHHHHHHHHcC-CcccCCch-hc-------CceEEEEECCCCCCcCHHHHHHHHHHCCEEEec
Confidence 22456677889999999999998875 33322211 00 000012333222 1456788889999999999
Q ss_pred CCCCCCCCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 423 GKHFGFSPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 423 g~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
|..+ ..+++|++... ++++++.+++.|++++
T Consensus 329 g~~~--~~~~iRis~~~~~t~edi~~~l~~L~~~l 361 (368)
T PRK13479 329 GKLT--QVDTFRIGCIGDVDAADIRRLVAAIAEAL 361 (368)
T ss_pred CCCC--CCCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 8654 25689998634 8999999999999876
No 171
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.89 E-value=6.5e-21 Score=190.11 Aligned_cols=281 Identities=11% Similarity=0.072 Sum_probs=197.4
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCCh--hhhhhhcCCeEeeec
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSY--PSITDCVKSRLYKWA 219 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~--~~~~~~~g~~~~~~~ 219 (456)
..++|+.++++++. +. .++.|++|+|++++++.++..+..++| ++++..+++++. ...++..|.+++.++
T Consensus 37 ~~~~r~~la~l~~~---~~-~~~~i~~t~~~t~al~~~~~~l~~~~~----~vlv~~~~~~~~~~~~~a~~~g~~~~~v~ 108 (363)
T TIGR02326 37 VEQIRQQLLALATA---EE-GYTSVLLQGSGTFAVEAVIGSAVPKDG----KLLVVINGAYGARIVQIAEYLGIPHHVVD 108 (363)
T ss_pred HHHHHHHHHHHhCC---CC-CceEEEEcCCCHHHHHHHHHhcCCCCC----eEEEEeCChhhHHHHHHHHHcCCceEEEe
Confidence 35677778887754 10 124799999999999999999988888 777776666554 356788899888666
Q ss_pred cCc------ccccc-----CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcEEEe
Q 012785 220 GDA------KRFNK-----DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHDLMLF 282 (456)
Q Consensus 220 ~d~------~~l~~-----~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i~i~ 282 (456)
.+. +.++. .+++++.+++++||||..++ ++|+++|+++|+|+++.-. ..++. ...+-+++++
T Consensus 109 ~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g-~~~~~~~~~~~D~~~~ 187 (363)
T TIGR02326 109 TGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFG-GIPIDIAELHIDYLIS 187 (363)
T ss_pred CCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEcccccc-CcccchhhcCccEEEe
Confidence 542 33322 13567888899999999987 4889999999999877632 22222 2234579999
Q ss_pred cCcccc-CCCCceEEEEEEeCHHHHHHHHHHH------------------hhccCcCChHHHHHHHHHHHhhhCCCCCCC
Q 012785 283 TVSKST-GHAGTRIGWALVKDMEVAKKMTKYI------------------ELNTIGVSKDSQLRAAKVLKVVSDSCKPSG 343 (456)
Q Consensus 283 S~SK~~-g~~G~RiG~l~~~~~~~~~~l~~~~------------------~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~ 343 (456)
|++|.+ |.+| +||++++ ++..+++.... ....+..+...+.++.++++.+.+.
T Consensus 188 s~~K~l~~p~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~----- 259 (363)
T TIGR02326 188 SANKCIQGVPG--FGFVIAR-QAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKE----- 259 (363)
T ss_pred cCccccccCCc--ceEEEEC-HHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHh-----
Confidence 999987 5556 7999997 77766543210 0123456777888877777643221
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc----cHHHHHHHHHhCCEE
Q 012785 344 SEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----EIEDCESFLKGNKIL 419 (456)
Q Consensus 344 ~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----~~~~~~~~l~~~gI~ 419 (456)
..+++.+++++++++++.+.|++++ +....+.. ...+...|+.+++ +...+.+.|+++||.
T Consensus 260 ----g~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~ 324 (363)
T TIGR02326 260 ----GGVAARHQRYQQNQKTLVAGMRALG-FEPLLDDE----------IQSPIITSFYSPEDPDYRFADFYQRLKEQGFV 324 (363)
T ss_pred ----hCHHHHHHHHHHHHHHHHHHHHHcC-CeeccCcc----------cCCceEEEEECCCCCCCCHHHHHHHHHHCCEE
Confidence 2356678899999999999998875 33322110 0112245666653 346688888999999
Q ss_pred eecCCCCCCCCCeEEEEe-cC-ChhHHHHHHHHHHhhhC
Q 012785 420 TRSGKHFGFSPKYVRISM-LD-RDENYNLFVQRLSKILS 456 (456)
Q Consensus 420 v~pg~~fg~~~~~iRis~-~~-~~e~i~~~l~~L~~~l~ 456 (456)
++||..+. .++|||++ +. +.++++++++.|++++.
T Consensus 325 v~~g~~~~--~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 325 IYPGKVSQ--VDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred EECCcCCC--CCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 99998663 57999995 43 89999999999998863
No 172
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.89 E-value=3.4e-21 Score=194.80 Aligned_cols=271 Identities=16% Similarity=0.157 Sum_probs=186.2
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcC--CCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeec
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSS--QDASEPISVVSAAPYYSSYPSITDCVKSRLYKWA 219 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~--~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~ 219 (456)
..+|++.++++++. ++.+++++| ++++..++..+.. +++ .|+.....|......+...|.++..|+
T Consensus 92 ~~~Le~~la~~~g~-------~~~l~~~sG-~~an~~ai~~l~~~~~~~----~v~~~~~~h~s~~~~~~~~g~~~~~~~ 159 (402)
T TIGR01821 92 HVELEAELADLHGK-------ESALVFTSG-YVANDATLATLAKIIPGC----VIFSDELNHASMIEGIRHSGAEKFIFR 159 (402)
T ss_pred HHHHHHHHHHHhCC-------CeEEEECch-HHHHHHHHHHhhCCCCCC----EEEEcchHhHHHHHHHHHcCCeEEEEC
Confidence 37899999998852 345555555 7888888888765 555 555554555455566666787766554
Q ss_pred c-Cccccc---c----CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCC----CCCCCCCC---C-CCCc
Q 012785 220 G-DAKRFN---K----DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYW----PQYTSITY---P-ADHD 278 (456)
Q Consensus 220 ~-d~~~l~---~----~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~----~~~~~~~~---~-~~~~ 278 (456)
. |.+.++ . .++++|++++|+||||.+.+ ++|+++++++|+||+|.. +...+... . .+.+
T Consensus 160 ~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~d 239 (402)
T TIGR01821 160 HNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRID 239 (402)
T ss_pred CCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCe
Confidence 3 433332 1 24689999999999999977 389999999999999972 21122211 1 2347
Q ss_pred EEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhh--ccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHH
Q 012785 279 LMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIEL--NTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQ 356 (456)
Q Consensus 279 i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~--~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~ 356 (456)
|+++||||.+|++| ||++++ +++++.+...... .+.+.++..+.++.+.|+.+.+ . ...++.
T Consensus 240 iv~~t~sKa~g~~G---G~i~~~-~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~-----------~-~~~~~~ 303 (402)
T TIGR01821 240 IIEGTLAKAFGVVG---GYIAAS-RKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKE-----------S-QDLRRA 303 (402)
T ss_pred EEEEechhhhccCC---ceeecC-HHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhc-----------C-HHHHHH
Confidence 88999999999888 999986 8898888765432 2456788888888888874322 1 344556
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHH-HhCCEEeecCCCCC--CCCC
Q 012785 357 MSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFL-KGNKILTRSGKHFG--FSPK 431 (456)
Q Consensus 357 ~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l-~~~gI~v~pg~~fg--~~~~ 431 (456)
++++++++.+.|++++ +.+..+.+ +++.+.++. ....+.+.| +++||.+++..... .+.+
T Consensus 304 ~~~~~~~l~~~L~~~g-~~~~~~~~--------------~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~ 368 (402)
T TIGR01821 304 HQENVKRLKNLLEALG-IPVIPNPS--------------HIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTE 368 (402)
T ss_pred HHHHHHHHHHHHHHcC-CCcCCCCC--------------CEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCc
Confidence 6788888999998864 34333333 355555543 244566665 46799999855322 2357
Q ss_pred eEEEEec--CChhHHHHHHHHHHhhh
Q 012785 432 YVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 432 ~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
++||++. .++++++++++.|++++
T Consensus 369 ~lRis~~~~~t~edi~~~~~~l~~~~ 394 (402)
T TIGR01821 369 RLRITPTPAHTDKMIDDLVEALLLVW 394 (402)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 8999985 38999999999998875
No 173
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.89 E-value=2.4e-21 Score=194.93 Aligned_cols=207 Identities=13% Similarity=0.131 Sum_probs=152.6
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChh----hhhhhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYP----SITDCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~----~~~~~~g~~~~~ 217 (456)
..+|+++++++.+. + ..++++++++++.+++.+++++|| +|+++.|+|.... ..++..|+++..
T Consensus 67 ~~~le~~lA~l~g~-------~-~~i~~~sG~~Al~~~l~~ll~~Gd----~Viv~~~~y~~t~~~~~~~~~~~G~~v~~ 134 (403)
T PRK07503 67 LALLEQRMASLEGG-------E-AAVALASGMGAITATLWTLLRPGD----EVIVDQTLYGCTFAFLHHGLGEFGVTVRH 134 (403)
T ss_pred HHHHHHHHHHHhCC-------C-cEEEEcCHHHHHHHHHHHHcCCCC----EEEEccCccchHHHHHHHHHhhCCEEEEE
Confidence 48999999999863 2 345555667899999999999999 9999999997633 344567888887
Q ss_pred ecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCcccc
Q 012785 218 WAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKST 288 (456)
Q Consensus 218 ~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~ 288 (456)
++. |.+.++. .++++|++++|+||||.+.+ ++|+++|+++|+|++|..+.. ..+...+.+++++|+||.+
T Consensus 135 vd~~d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~-~~~l~~g~Di~v~S~tK~l 213 (403)
T PRK07503 135 VDLTDPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYL-QRPLELGADLVVHSATKYL 213 (403)
T ss_pred eCCCCHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-CCchhhCCCEEEccccccc
Confidence 766 4555543 36899999999999999977 378999999999999985421 1112235579999999999
Q ss_pred CCCC-ceEEEEEEeCHHHHHHHHHH--HhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHH
Q 012785 289 GHAG-TRIGWALVKDMEVAKKMTKY--IELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLR 365 (456)
Q Consensus 289 g~~G-~RiG~l~~~~~~~~~~l~~~--~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ 365 (456)
+.+| +|.||++. +++++++++.. +.......+++.+..+...|+ .+....++..++...+.
T Consensus 214 ~g~gd~~gG~v~~-~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~---------------tl~~r~~~~~~na~~~a 277 (403)
T PRK07503 214 GGHGDITAGLVVG-GKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLK---------------TLALRMDRHCASAQAVA 277 (403)
T ss_pred cCCCceeEEEEEc-CHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcc---------------hHHHHHHHHHHHHHHHH
Confidence 8766 78888886 48898888743 443456677777766655444 33334445557888889
Q ss_pred HHHHhcCCcccc
Q 012785 366 MAVQKSGLFSVP 377 (456)
Q Consensus 366 ~~L~~~~~~~~~ 377 (456)
+.|++++.++..
T Consensus 278 ~~L~~~p~v~~V 289 (403)
T PRK07503 278 EWLARHPAVELV 289 (403)
T ss_pred HHHHhCCCccEE
Confidence 999988765543
No 174
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.89 E-value=3.9e-21 Score=192.60 Aligned_cols=286 Identities=13% Similarity=0.119 Sum_probs=188.3
Q ss_pred ccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhh
Q 012785 129 SYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSIT 208 (456)
Q Consensus 129 ~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~ 208 (456)
++|+++. ..+|++.+|++++. ++.+++++| +.++..++.+++++|| +|+++.|.|......+
T Consensus 56 ~r~~~pt------~~~Le~~lA~l~G~-------~~al~~~sG-~~Ai~~~l~al~~~Gd----~Vv~~~~~y~~~~~~~ 117 (386)
T PRK06767 56 SRLGNPT------VKLFEERMAVLEGG-------EEALAFGSG-MAAISATLIGFLKAGD----HIICSNGLYGCTYGFL 117 (386)
T ss_pred cCCCCcc------hHHHHHHHHHHhCC-------CcEEEECCH-HHHHHHHHHHHhCCCC----EEEEcCCcHHHHHHHH
Confidence 4566665 48999999999973 345656555 5789999999999999 9999999888765554
Q ss_pred hh----cCCeEeeecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC-CCCCCCC
Q 012785 209 DC----VKSRLYKWAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ-YTSITYP 274 (456)
Q Consensus 209 ~~----~g~~~~~~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~-~~~~~~~ 274 (456)
.. .|+++...+. |.+.++. .++++|++++|+||||.+.+ ++|+++|+++|+|++|..+. ..++ .
T Consensus 118 ~~~~~~~gi~~~~~~~~d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl--~ 195 (386)
T PRK06767 118 EVLEEKFMITHSFCDMETEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPL--E 195 (386)
T ss_pred HHHHhhcCeEEEEeCCCCHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCCch--h
Confidence 33 3555443332 4555543 36799999999999999977 48899999999999997431 1222 2
Q ss_pred CCCcEEEecCccccCCCCceE-EEEEEeCHHHHHHHH-HHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHH
Q 012785 275 ADHDLMLFTVSKSTGHAGTRI-GWALVKDMEVAKKMT-KYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEF 352 (456)
Q Consensus 275 ~~~~i~i~S~SK~~g~~G~Ri-G~l~~~~~~~~~~l~-~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~ 352 (456)
.+.+++++|+||.++.+|.|+ ||++++ ++.++++. ..+.......+++.+.++...|+ .+..
T Consensus 196 ~g~Div~~S~sK~l~g~g~~~gG~v~~~-~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~---------------tl~~ 259 (386)
T PRK06767 196 LGCDAVVHSATKYIGGHGDVVAGVTICK-TRALAEKIRPMRKDIGGIMAPFDAWLLLRGLK---------------TLAV 259 (386)
T ss_pred cCCcEEEecCcceecCCCCceeEEEEeC-hHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC---------------cHHH
Confidence 344799999999998889986 899986 66666654 33333334456666555444333 2344
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccc-CCCCcccccccccCCCCCceEEeecCc---cHHHHHHHHHhCCEEeecCCCC--
Q 012785 353 TNHQMSTRWKQLRMAVQKSGLFSVP-ELPSQFCTFLGRAFEPQPAFAWLKCEQ---EIEDCESFLKGNKILTRSGKHF-- 426 (456)
Q Consensus 353 ~~~~~~~~~~~l~~~L~~~~~~~~~-~~~g~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~~l~~~gI~v~pg~~f-- 426 (456)
..++.+++.+.+.+.|++++.+... .|+. ...++..+..+..+.+.+++ +...+.+.|+..++.+.-|...
T Consensus 260 r~~~~~~~a~~la~~L~~~p~v~~v~~p~~---~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl 336 (386)
T PRK06767 260 RMDRHCDNAEKIVSFLKNHDAVEGVWYPEG---ELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETL 336 (386)
T ss_pred HHHHHHHHHHHHHHHHHcCCCccEEECCCc---HHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCcc
Confidence 5667788999999999998766532 2211 11111112223345556653 3455667777777776665332
Q ss_pred --------------------CCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 427 --------------------GFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 427 --------------------g~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
|..++.||+|++. |+.+.+++-|.+.|
T Consensus 337 ~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl--E~~~dl~~dl~~al 383 (386)
T PRK06767 337 IQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL--ESWEDIVSDLEQAL 383 (386)
T ss_pred ccCCCccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHH
Confidence 1125689999964 34555566665554
No 175
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.89 E-value=4.2e-21 Score=193.90 Aligned_cols=313 Identities=12% Similarity=0.037 Sum_probs=206.2
Q ss_pred CCCeEEecCCCCCCCchhHhhhcccccccccCccccccccC-----CCCcccCCCHHHHHHHHHHHHH-hcCccCCCceE
Q 012785 93 GERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSD-----VRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHI 166 (456)
Q Consensus 93 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~-----~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I 166 (456)
+..+++|+.|+|+++.|+.+..... +. .. .+.|.+ ..| .+++++++++++.. +|.. .+++
T Consensus 19 ~~~~~~l~~g~~~~~~p~~~~~~~~-~~--~~---~~~~~~~~~~~~~g-----~~~~~~~~~~~la~~~g~~---~~~v 84 (398)
T cd00613 19 DQSMSFLGSGTYKHNPPAVIKRNIL-EN--EF---YTAYTPYQPEISQG-----RLQALFELQTMLCELTGMD---VANA 84 (398)
T ss_pred ccCcccccccccCCcCcHHHHHHhc-cc--cC---cccCCCCChhhhhh-----HHHHHHHHHHHHHHHHCCC---ccce
Confidence 3456999999999998876654322 11 11 123444 567 48999999998854 4543 2356
Q ss_pred EEcc-CHHHHHHHHHHHhcCC--CCCCCcEEEEeCCCCCChhhhhhhcC----CeEeeeccC------cccccc---CCC
Q 012785 167 VVGT-GSTQLFQAALYALSSQ--DASEPISVVSAAPYYSSYPSITDCVK----SRLYKWAGD------AKRFNK---DGP 230 (456)
Q Consensus 167 ~~t~-G~~~al~~~~~~l~~~--gd~~~~~Vlv~~P~y~~~~~~~~~~g----~~~~~~~~d------~~~l~~---~~~ 230 (456)
++++ |++++...+..++..+ || +|++++|.|+.+...+...| .+++.++.+ .+.++. .++
T Consensus 85 ~~~~~g~~~~~~~~~~~~~~~~~gd----~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~t 160 (398)
T cd00613 85 SLQDEATAAAEAAGLAAIRAYHKRN----KVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEEV 160 (398)
T ss_pred eccCchHHHHHHHHHHHHhcccCCC----EEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCCe
Confidence 5555 5555555555565665 88 99999999999998888877 777766543 344433 367
Q ss_pred eEEEEcCCCCCCcccch------HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCccccCCC----CceEEEEEE
Q 012785 231 YIELVTSPNNPDGSVRQ------SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKSTGHA----GTRIGWALV 300 (456)
Q Consensus 231 ~~i~v~~P~NPtG~~~~------~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~g~~----G~RiG~l~~ 300 (456)
++|++++|+ |||.+.+ ++|+++|+++|+|+++............+.+++++|++|.+ .| |.|+||+++
T Consensus 161 ~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~ 238 (398)
T cd00613 161 AALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAV 238 (398)
T ss_pred EEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeeccccC-CCCCCCCCceeEEEE
Confidence 889898885 9999865 37899999999999875322111122345789999999998 46 799999999
Q ss_pred eCHHHHHHHHHH-----------------------------HhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHH
Q 012785 301 KDMEVAKKMTKY-----------------------------IELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFE 351 (456)
Q Consensus 301 ~~~~~~~~l~~~-----------------------------~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~ 351 (456)
+ +++.+.+... ....+++.+.....++...+..+ + ++.++
T Consensus 239 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~--~--------~~g~~ 307 (398)
T cd00613 239 K-KELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYL--G--------PEGLK 307 (398)
T ss_pred h-hhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHh--C--------HHHHH
Confidence 6 7777654110 00111222233333333333321 1 44677
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc----cHHHHHHHHHhCCEEeecCCCCC
Q 012785 352 FTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----EIEDCESFLKGNKILTRSGKHFG 427 (456)
Q Consensus 352 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----~~~~~~~~l~~~gI~v~pg~~fg 427 (456)
+.+++++++++++.+.|++++... .+.+.+. .-++++++. +.+.+.+.|.++||.+.... .
T Consensus 308 ~~~~~~~~~~~~l~~~L~~~~~~~--~~~~~~~-----------~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~--~ 372 (398)
T cd00613 308 EIAERAHLNANYLAKRLKEVGGVL--PFNGPFF-----------HEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMY--L 372 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcc--cCCCCee-----------EEEEEEcCCcchHHHHHHHHhhhhcCccccccc--c
Confidence 888999999999999999876433 2222220 014666653 35667788889999865421 1
Q ss_pred CCCCeEEEEecC--ChhHHHHHHHHH
Q 012785 428 FSPKYVRISMLD--RDENYNLFVQRL 451 (456)
Q Consensus 428 ~~~~~iRis~~~--~~e~i~~~l~~L 451 (456)
...+.+|++... ++|+++++++.|
T Consensus 373 ~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 373 PVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred CCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 235789999764 899999998764
No 176
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.89 E-value=5.2e-21 Score=192.14 Aligned_cols=256 Identities=16% Similarity=0.170 Sum_probs=168.2
Q ss_pred ccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhh
Q 012785 129 SYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSIT 208 (456)
Q Consensus 129 ~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~ 208 (456)
..|+.+. ..+|++.+|++++. + ..+++++++.++..++.+++++|| +|++++|.|..+...+
T Consensus 60 ~r~~~p~------~~~Le~~lA~l~G~------~--~~~~~~sG~~Ai~~~l~~~l~~Gd----~Vl~~~~~y~~~~~~~ 121 (398)
T PRK07504 60 SRYSNPT------VDMFEKRMCALEGA------E--DARATASGMAAVTAAILCQVKAGD----HVVAARALFGSCRYVV 121 (398)
T ss_pred ecCCCch------HHHHHHHHHHHhCC------C--eeeEecCHHHHHHHHHHHHhCCCC----EEEEcCCchhHHHHHH
Confidence 3566655 48999999999864 2 334466777888888888889999 9999999999865443
Q ss_pred ----hhcCCeEeeec-cCcccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCC
Q 012785 209 ----DCVKSRLYKWA-GDAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPA 275 (456)
Q Consensus 209 ----~~~g~~~~~~~-~d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~ 275 (456)
...|+++..++ .|.+.++. .++++|++++|+||||.+.+ ++|+++|+++|+|++|..+.+. .+...
T Consensus 122 ~~~~~~~G~~v~~vd~~d~e~l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~-~~~~~ 200 (398)
T PRK07504 122 ETLLPRYGIESTLVDGLDLDNWEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQ-KPLEL 200 (398)
T ss_pred HHHHhhcCeEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccC-Cchhh
Confidence 45688777665 35555543 36899999999999999987 4889999999999999853221 11233
Q ss_pred CCcEEEecCccccCCCCceEEEEEEeCHHHHH-HHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHH
Q 012785 276 DHDLMLFTVSKSTGHAGTRIGWALVKDMEVAK-KMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTN 354 (456)
Q Consensus 276 ~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~-~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~ 354 (456)
+.+++++|+||.++.+|+|+|++++.+++.++ .++..........+++.+..+...|+ .+....
T Consensus 201 gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~---------------tl~~R~ 265 (398)
T PRK07504 201 GAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLE---------------TLPVRV 265 (398)
T ss_pred CCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccc---------------hHHHHH
Confidence 56899999999998899999754443355543 45555444455566665555555444 344455
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCCcccc----cccccCCCCCceEEeecCccHHHHHHHHHhCCE
Q 012785 355 HQMSTRWKQLRMAVQKSGLFSVPELPSQFCT----FLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKI 418 (456)
Q Consensus 355 ~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~----~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI 418 (456)
++..++...+.+.|++++.+.....+|.-.. ..++.....+..+-++++++.+...+.+..-.+
T Consensus 266 ~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l~~ 333 (398)
T PRK07504 266 RQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNALKI 333 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhCCc
Confidence 5556888888999998875542222221100 011112223555677775444444444444333
No 177
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.89 E-value=4.4e-21 Score=194.32 Aligned_cols=271 Identities=16% Similarity=0.162 Sum_probs=186.5
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcC--CCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeec
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSS--QDASEPISVVSAAPYYSSYPSITDCVKSRLYKWA 219 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~--~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~ 219 (456)
..+|++.+|++++. ++.+++++|. ++...++..+.. +++ .|+.....+......++..+.++..++
T Consensus 93 ~~~l~~~la~~~g~-------~~~~~~~sG~-~an~~ai~~l~~~~~~~----~i~~~~~~h~s~~~~~~~~~~~~~~~~ 160 (407)
T PRK09064 93 HVELERELADLHGK-------EAALVFTSGY-VSNDATLSTLAKLIPDC----VIFSDELNHASMIEGIRRSRCEKHIFR 160 (407)
T ss_pred HHHHHHHHHHHhCC-------CcEEEECcHH-HHHHHHHHHHhCCCCCC----EEEEeCcchHHHHHHHHHcCCcEEEEC
Confidence 47899999988752 4567777765 676667776654 555 555565555555566666777776665
Q ss_pred c-Cccccc---c----CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCC-C---CCCCCCC---CC-CCCc
Q 012785 220 G-DAKRFN---K----DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYY-W---PQYTSIT---YP-ADHD 278 (456)
Q Consensus 220 ~-d~~~l~---~----~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~-~---~~~~~~~---~~-~~~~ 278 (456)
. |.+.++ . .++++|++++|+||+|.+.+ ++|+++++++|+||+|. + +...++. .. .+.+
T Consensus 161 ~~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~d 240 (407)
T PRK09064 161 HNDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRID 240 (407)
T ss_pred CCCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCe
Confidence 4 333322 1 35689999999999998866 48999999999999996 2 1111221 11 2347
Q ss_pred EEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhh--ccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHH
Q 012785 279 LMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIEL--NTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQ 356 (456)
Q Consensus 279 i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~--~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~ 356 (456)
|+++||||.||++| ||++++ +++++.+...... .+.+.++..+.++.+.|+.+.. ....+++
T Consensus 241 iv~~t~sKa~g~~G---G~~~~~-~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~------------~~~~~~~ 304 (407)
T PRK09064 241 IIEGTLAKAFGVMG---GYIAGS-AALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKE------------SNEERER 304 (407)
T ss_pred EEEEecchhhhccC---ceEecC-HHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhc------------CHHHHHH
Confidence 89999999999888 999986 8888888765432 2446677778888787774322 1234677
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHH-HhCCEEeecCCCCCC--CCC
Q 012785 357 MSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFL-KGNKILTRSGKHFGF--SPK 431 (456)
Q Consensus 357 ~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l-~~~gI~v~pg~~fg~--~~~ 431 (456)
++++++++.+.|++.+ +.+..+. ++++++.++. ....+.+.| +++||.+++...... +.+
T Consensus 305 ~~~~~~~l~~~L~~~g-~~~~~~~--------------~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~ 369 (407)
T PRK09064 305 HQERAAKLKAALDAAG-IPVMPNE--------------SHIVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTE 369 (407)
T ss_pred HHHHHHHHHHHHHHcC-CCCCCCC--------------CCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCc
Confidence 8889999999998864 3333222 3356666643 344566655 467999998653322 347
Q ss_pred eEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 432 YVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 432 ~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
++||++.. ++++++++++.|++++
T Consensus 370 ~lRis~~~~~t~edi~~l~~~l~~~~ 395 (407)
T PRK09064 370 RLRITPTPFHTDEMIDHLVEALVEVW 395 (407)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 89999853 8999999999999875
No 178
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.89 E-value=2.8e-21 Score=195.33 Aligned_cols=268 Identities=14% Similarity=0.080 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCC---------C-CCCCcEEEEeCCCCCChhhhhhhcC
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQ---------D-ASEPISVVSAAPYYSSYPSITDCVK 212 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~---------g-d~~~~~Vlv~~P~y~~~~~~~~~~g 212 (456)
.+|.+.++++.+ .+++++++++++|++.+++++... | + +|++.+-+|++....+...+
T Consensus 86 ~~l~~~l~~~~~--------~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~----~vi~~~~~~HG~~~~~~~~~ 153 (401)
T PRK00854 86 APLYEELAALTG--------SHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQA----EIIVCADNFHGRTLSIVGFS 153 (401)
T ss_pred HHHHHHHHhhCC--------CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCc----eEEEECCCcCCccHHHHhcc
Confidence 567777777653 248999999999999999988531 2 3 78998888888654443322
Q ss_pred C-------------eEeeec-cCcccccc---CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCC
Q 012785 213 S-------------RLYKWA-GDAKRFNK---DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWP 266 (456)
Q Consensus 213 ~-------------~~~~~~-~d~~~l~~---~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~ 266 (456)
. .+..++ .|.+.++. .++++|++++|+||+|.+++ ++|+++|+++|+||+|.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~ 233 (401)
T PRK00854 154 TDPDARGGFGPFTPGFRVVPFGDAEALEAAITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGL 233 (401)
T ss_pred CCccccccCCCCCCCeEEeCCCCHHHHHHHhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 1 111222 25555543 36789999999999999886 2799999999999999864
Q ss_pred CCCCC--C---CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCC
Q 012785 267 QYTSI--T---YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKP 341 (456)
Q Consensus 267 ~~~~~--~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~ 341 (456)
.+.+. . .....++.+ +||.++-..+|+||++++ +++++.+.......+++.+++.|.++.+.|+.+.+
T Consensus 234 g~~g~~~~~~~~g~~~D~~~--~~K~l~gg~~~ig~v~~~-~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~---- 306 (401)
T PRK00854 234 GRTGKLLAEEHEGIEADVTL--IGKALSGGFYPVSAVLSN-SEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTE---- 306 (401)
T ss_pred CCCchHhHHhhcCCCCCEEE--ecccccCCccCeEEEEEc-HHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHH----
Confidence 44431 1 111223443 479998333799999996 88888876555556788899999999999985322
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCc--cccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCC
Q 012785 342 SGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLF--SVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNK 417 (456)
Q Consensus 342 ~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~--~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~g 417 (456)
+...+.++++++++.+.|++++.. ...++.|.+ +.+.-.++ ....+.+.|.++|
T Consensus 307 ---------~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~-------------~~i~~~~~~~~~~~~~~~L~~~G 364 (401)
T PRK00854 307 ---------EGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLM-------------LAVELEPEAGGARQYCEALKERG 364 (401)
T ss_pred ---------cCHHHHHHHHHHHHHHHHHhhccCceEEEeccceE-------------EEEEEecCchhHHHHHHHHHHCC
Confidence 124677888888888888876421 112333443 33222222 3566778888899
Q ss_pred EEeecCCCCCCCCCeEEEEec--CChhHHHHHHHHHHhhhC
Q 012785 418 ILTRSGKHFGFSPKYVRISML--DRDENYNLFVQRLSKILS 456 (456)
Q Consensus 418 I~v~pg~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l~ 456 (456)
|.+.+. ..+++|++.. .+++++++++++|++++.
T Consensus 365 V~v~~~-----~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 365 LLAKDT-----HDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred eEEecC-----CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 999762 3579999964 599999999999998763
No 179
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=1.1e-20 Score=189.34 Aligned_cols=282 Identities=13% Similarity=0.093 Sum_probs=185.1
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhh----hhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSIT----DCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~----~~~g~~~~~ 217 (456)
..+|++++|++.+. ...++++ ++++++.+++.+++++|| +|+++.|+|......+ ...|+++..
T Consensus 63 ~~~Le~~lA~~~g~-------~~~i~~~-sG~~Ai~~~l~all~~Gd----~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~ 130 (388)
T PRK07811 63 RTALEEQLAALEGG-------AYGRAFS-SGMAATDCLLRAVLRPGD----HIVIPNDAYGGTFRLIDKVFTRWGVEYTP 130 (388)
T ss_pred HHHHHHHHHHHhCC-------CceEEeC-CHHHHHHHHHHHHhCCCC----EEEEcCCCchHHHHHHHHhCcCCCeEEEE
Confidence 48999999999874 2345554 557999999999999999 9999999999644332 235777666
Q ss_pred ecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCC-CCCCCCCCCcEEEecCccc
Q 012785 218 WAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQY-TSITYPADHDLMLFTVSKS 287 (456)
Q Consensus 218 ~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~-~~~~~~~~~~i~i~S~SK~ 287 (456)
++. |.+.++. .++++|++++|+||||.+.+ ++|+++|+++|+|++|..+.. .++ ..+.+++++|+||.
T Consensus 131 ~d~~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~--~~gaDivv~S~sK~ 208 (388)
T PRK07811 131 VDLSDLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQPL--ALGADVVVHSTTKY 208 (388)
T ss_pred eCCCCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCch--hhCCcEEEecCcee
Confidence 553 5555543 36899999999999999866 378999999999999985422 222 23456999999999
Q ss_pred cCCCC-ceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 012785 288 TGHAG-TRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRM 366 (456)
Q Consensus 288 ~g~~G-~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 366 (456)
++.+| .+.||++++++++.++++..+.......+++.+..+...|+ .+....++..++...+.+
T Consensus 209 l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~---------------tl~~R~~~~~~na~~la~ 273 (388)
T PRK07811 209 IGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLK---------------TLAVRMDRHSENAEAVAE 273 (388)
T ss_pred ecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccC---------------cHHHHHHHHHHHHHHHHH
Confidence 98654 57899998768888888776654455566665554444443 244455666778889999
Q ss_pred HHHhcCCccccCCCCcc----cccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCC---------------
Q 012785 367 AVQKSGLFSVPELPSQF----CTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFG--------------- 427 (456)
Q Consensus 367 ~L~~~~~~~~~~~~g~~----~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg--------------- 427 (456)
.|++++.+.....+|.- +....+.....+..+.++++++.+...+.+..-.+. ..|..+|
T Consensus 274 ~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~-~~~~s~G~~~sl~~~~~~~~~~ 352 (388)
T PRK07811 274 FLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTKVF-TLAESLGGVESLIEHPSAMTHA 352 (388)
T ss_pred HHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCCcc-eeeccCCCCcceEeCCcccCcc
Confidence 99988755422222210 011111122234456677764444444444443331 1122221
Q ss_pred --------CCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 428 --------FSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 428 --------~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
..++.||||++. |+.+.+++.|.+.|
T Consensus 353 ~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al 386 (388)
T PRK07811 353 STAGSQLEVPDDLVRLSVGI--EDVADLLADLEQAL 386 (388)
T ss_pred cCCHhhcCCCCCEEEEEeCC--CCHHHHHHHHHHHh
Confidence 125789999964 34555666666655
No 180
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=1.7e-20 Score=187.47 Aligned_cols=205 Identities=11% Similarity=0.104 Sum_probs=156.5
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhh---hhcCCeEeee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSIT---DCVKSRLYKW 218 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~---~~~g~~~~~~ 218 (456)
..+|++.+|++++. +++++++|+++|+..++.+++++|| +|+++.|+|..+...+ ...|+++..+
T Consensus 55 ~~~lE~~lA~l~g~--------~~~l~~~sG~~Ai~~~l~~ll~~GD----~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~ 122 (385)
T PRK08574 55 LRPLEEALAKLEGG--------VDALAFNSGMAAISTLFFSLLKAGD----RVVLPMEAYGTTLRLLKSLEKFGVKVVLA 122 (385)
T ss_pred HHHHHHHHHHHhCC--------CcEEEeCCHHHHHHHHHHHHhCCCC----EEEEcCCCchhHHHHHHHhhccCcEEEEE
Confidence 48999999999862 4677888899999999999999999 9999999999987666 4458887776
Q ss_pred ccCcccccc---C-CCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCC-CCCCCCCCCCCcEEEecCcccc
Q 012785 219 AGDAKRFNK---D-GPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWP-QYTSITYPADHDLMLFTVSKST 288 (456)
Q Consensus 219 ~~d~~~l~~---~-~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~-~~~~~~~~~~~~i~i~S~SK~~ 288 (456)
..|.+.++. . ++++|++++|+||||.+++ ++|+++|+++|+|++|..+ .+.++ ..+.+++++|+||.+
T Consensus 123 ~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l--~~GaDivv~S~sK~l 200 (385)
T PRK08574 123 YPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPL--RHGADFVVHSLTKYI 200 (385)
T ss_pred CCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCChh--hhCCcEEEeeCceee
Confidence 667666543 3 6899999999999999987 4789999999999999643 22333 235689999999999
Q ss_pred CCCCceE-EEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 012785 289 GHAGTRI-GWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMA 367 (456)
Q Consensus 289 g~~G~Ri-G~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 367 (456)
+.+|-.+ |++++.++++.++++..+.......+++....+...|+ .+....++..++...+.+.
T Consensus 201 ~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~---------------tL~~R~~~~~~na~~la~~ 265 (385)
T PRK08574 201 AGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLK---------------TLEVRFERQCRNAMAIAEF 265 (385)
T ss_pred cCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccC---------------cHHHHHHHHHHHHHHHHHH
Confidence 7677664 76777668898988877765566666665555444443 2334455556677888999
Q ss_pred HHhcCCcc
Q 012785 368 VQKSGLFS 375 (456)
Q Consensus 368 L~~~~~~~ 375 (456)
|++++.+.
T Consensus 266 L~~~p~v~ 273 (385)
T PRK08574 266 LSEHPKVA 273 (385)
T ss_pred HHcCCCcC
Confidence 99887554
No 181
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.88 E-value=1.2e-20 Score=189.03 Aligned_cols=289 Identities=12% Similarity=0.104 Sum_probs=186.5
Q ss_pred ccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChh---
Q 012785 129 SYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYP--- 205 (456)
Q Consensus 129 ~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~--- 205 (456)
+.|+.+. ..+|++++|++.+. +..+++++++.++.+++.+++.+|| +|+++.|.|....
T Consensus 54 ~r~~~p~------~~~le~~lA~l~g~--------~~av~~~sG~~Ai~~~l~al~~~Gd----~Vi~~~~~y~~t~~~~ 115 (391)
T TIGR01328 54 SRLGNPT------VSNLEGRIAFLEGT--------EAAVATSSGMGAIAATLLTILKAGD----HLISDECLYGCTFALL 115 (391)
T ss_pred eCCCCch------HHHHHHHHHHHhCC--------CcEEEECCHHHHHHHHHHHHhCCCC----EEEEecCcchHHHHHH
Confidence 3455554 47899999999974 2456777777899999999999999 9999999887543
Q ss_pred -hhhhhcCCeEeeeccC-cccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCC
Q 012785 206 -SITDCVKSRLYKWAGD-AKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPA 275 (456)
Q Consensus 206 -~~~~~~g~~~~~~~~d-~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~ 275 (456)
..+...|+++..++.+ .+.++. .++++|++++|+||+|.+.+ ++|+++|+++|+|++|..+.. ..+...
T Consensus 116 ~~~~~~~G~~~~~vd~~d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~-~~~~~~ 194 (391)
T TIGR01328 116 EHALTKFGIQVDFINMAIPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPML-TNPVAL 194 (391)
T ss_pred HHHHhcCCeEEEEECCCCHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhcc-CCchhc
Confidence 3345578888777663 455543 36799999999999999876 378999999999999985321 112233
Q ss_pred CCcEEEecCccccCCCCceE-EEEEEeCHHHHHHHHHHHhh--ccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHH
Q 012785 276 DHDLMLFTVSKSTGHAGTRI-GWALVKDMEVAKKMTKYIEL--NTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEF 352 (456)
Q Consensus 276 ~~~i~i~S~SK~~g~~G~Ri-G~l~~~~~~~~~~l~~~~~~--~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~ 352 (456)
..+++++|+||.+|.+|.++ |+++. +++++++++..... .....+++....+...|+ .+..
T Consensus 195 g~Divv~S~sK~lgg~g~~~gG~v~~-~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~---------------tl~~ 258 (391)
T TIGR01328 195 GVDVVVHSATKYIGGHGDVVAGLICG-KAELLQQIRMVGIKDMTGSVISPFDAWLILRGLK---------------TLNI 258 (391)
T ss_pred CCCEEEccccccccCCCCceEEEEEc-CHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcC---------------cHHH
Confidence 55699999999999889875 55555 58988888765322 223445555544444333 2334
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccCCCCcc----cccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCC-
Q 012785 353 TNHQMSTRWKQLRMAVQKSGLFSVPELPSQF----CTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFG- 427 (456)
Q Consensus 353 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~----~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg- 427 (456)
..++..++.+.+.+.|++++.++....+|.. ....++.....+..+-++++++.+.+.+.+..-.+.. .+..+|
T Consensus 259 r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~f~~~l~~~~-~~~s~G~ 337 (391)
T TIGR01328 259 RMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAKKLLNNLKLIR-LAVSLGD 337 (391)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHHHHHHhCCcce-EecCCCC
Confidence 5666778888899999988765433222211 0111122223344566677544444444444433321 121121
Q ss_pred -------------------------CCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 428 -------------------------FSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 428 -------------------------~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
..++.||||++. |+.+.+++.|.+.|
T Consensus 338 ~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al 388 (391)
T TIGR01328 338 AETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGL--EDADDLIADLKQAL 388 (391)
T ss_pred CcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHHH
Confidence 124689999964 34555666666554
No 182
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.88 E-value=8.6e-21 Score=192.36 Aligned_cols=262 Identities=12% Similarity=0.014 Sum_probs=176.4
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhcCCe----------------Eeeecc------
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCVKSR----------------LYKWAG------ 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~----------------~~~~~~------ 220 (456)
+.+++++++++|++.+++.... .|.. +|+...-+|++....+...... .++++.
T Consensus 95 ~~v~f~~sGseA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (420)
T TIGR00700 95 KKSVFFNSGAEAVENAVKIARSYTGRP---GVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGL 171 (420)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhcCCC---cEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccc
Confidence 5899999999999999987643 2321 7999999999987655443110 011110
Q ss_pred ---------Cccccc--------cCCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC--
Q 012785 221 ---------DAKRFN--------KDGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT-- 272 (456)
Q Consensus 221 ---------d~~~l~--------~~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~-- 272 (456)
+.+.++ .++..++++..-+.-+|..++ ++|+++|+++|+||+|.+..+.+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a 251 (420)
T TIGR00700 172 LDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFA 251 (420)
T ss_pred cccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHH
Confidence 011221 124567777555767787765 3899999999999999976544411
Q ss_pred -CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHH
Q 012785 273 -YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFE 351 (456)
Q Consensus 273 -~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~ 351 (456)
...+....+.+|||.++ +|+|+||++++ +++++.+.......+++.++++|.++.+.|+.+.++ ...+
T Consensus 252 ~~~~~~~pDi~~lsK~l~-~G~pig~v~~~-~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~---------~~~~ 320 (420)
T TIGR00700 252 CEHEGPEPDLITTAKSLA-DGLPLSGVTGR-AEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESE---------GLIE 320 (420)
T ss_pred HhhcCCCCCEEEeecccc-CCcceEEEEec-HHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhc---------cHHH
Confidence 11222333667999999 99999999997 999888876556679999999999999988765443 2333
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC-c-----c---HHHHHHHHHhCCEEeec
Q 012785 352 FTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE-Q-----E---IEDCESFLKGNKILTRS 422 (456)
Q Consensus 352 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~-~-----~---~~~~~~~l~~~gI~v~p 422 (456)
+.++.-+..++.+.+..+.++.+...++.|. ++|+.+. . + ...+.+.+.++||.+.|
T Consensus 321 ~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~--------------~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p 386 (420)
T TIGR00700 321 RARQIGRLVTDRLTTLKAVDPRIGDVRGLGA--------------MIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLT 386 (420)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCEEEeeccce--------------EEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEec
Confidence 3333333333444444444444444445544 5677651 1 1 23455666799999999
Q ss_pred CCCCCCCCCeEEEEecC--ChhHHHHHHHHHHhhhC
Q 012785 423 GKHFGFSPKYVRISMLD--RDENYNLFVQRLSKILS 456 (456)
Q Consensus 423 g~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~l~ 456 (456)
+..|+ +++||+++. +++++++++++|.++++
T Consensus 387 ~~~f~---~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 387 CGMFG---NIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred cCCCC---CEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 88774 799999853 89999999999998863
No 183
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.88 E-value=9.6e-21 Score=194.07 Aligned_cols=319 Identities=12% Similarity=0.114 Sum_probs=209.6
Q ss_pred CeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHH---H-HhcCccCCCceEEEcc
Q 012785 95 RIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLH---K-VVGNAITENHHIVVGT 170 (456)
Q Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~---~-~~g~~~~~~~~I~~t~ 170 (456)
.++.++.|.|+...|..+..... ...+ .+.|.+..+ ...+.++++++++. . ..|. +.+++++|+
T Consensus 69 ~~~~lg~g~~~~~~p~~~~~~~~----~~~~--~~~y~~~~~---~~~~g~~~~~~e~~~~la~l~g~---~~~~v~~~~ 136 (447)
T PRK00451 69 YPSFLGAGAYDHYIPAVVDHIIS----RSEF--YTAYTPYQP---EISQGTLQAIFEYQTMICELTGM---DVANASMYD 136 (447)
T ss_pred CcccCcccccCCcCcHHHHHHHh----chhH--HHhcCCCCC---ccchHHHHHHHHHHHHHHHHhCC---CcceEEecC
Confidence 57789999998877755543211 1111 223544110 00234555555332 2 2333 235799999
Q ss_pred CHHHHHHHHHHHhc-CCCCCCCcEEEEeCCCCCChhhhhhh----cCCeEeeeccCc-----ccccc---CCCeEEEEcC
Q 012785 171 GSTQLFQAALYALS-SQDASEPISVVSAAPYYSSYPSITDC----VKSRLYKWAGDA-----KRFNK---DGPYIELVTS 237 (456)
Q Consensus 171 G~~~al~~~~~~l~-~~gd~~~~~Vlv~~P~y~~~~~~~~~----~g~~~~~~~~d~-----~~l~~---~~~~~i~v~~ 237 (456)
|+++++..++.++. .+|| +|++++|.|+.+...++. .|.+++.++.|. +.++. .+++++++++
T Consensus 137 g~t~~~~~~~~a~~~~~g~----~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~d~~~l~~~i~~~t~~v~l~~ 212 (447)
T PRK00451 137 GATALAEAALMAVRITKRK----KVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVTDLEALEAAVDDDTAAVVVQY 212 (447)
T ss_pred cHHHHHHHHHHHHHhcCCC----EEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCCCHHHHHHhcCCCeEEEEEEC
Confidence 99999999988874 6888 999999999998887665 588888777653 33332 3678999999
Q ss_pred CCCCCcccch-----HHhhhcCcEEEe--eecCCCCCCCCCCCCCCCcEEEe---cCccccCCCCceEEEEEEeCHHHHH
Q 012785 238 PNNPDGSVRQ-----SVVNRSGGILVH--DLAYYWPQYTSITYPADHDLMLF---TVSKSTGHAGTRIGWALVKDMEVAK 307 (456)
Q Consensus 238 P~NPtG~~~~-----~l~~~~~~~iI~--De~y~~~~~~~~~~~~~~~i~i~---S~SK~~g~~G~RiG~l~~~~~~~~~ 307 (456)
| ||||.+.+ ++|+++|+++|+ |.+..+ ....+...+.+++++ +|||.+++.|.|+||++++ +++++
T Consensus 213 p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~~~g--~~~~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~-~~~~~ 288 (447)
T PRK00451 213 P-NFFGVIEDLEEIAEIAHAGGALFIVGVDPVSLG--LLKPPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATR-KKLVR 288 (447)
T ss_pred C-CCCCeeCCHHHHHHHHHHCCCEEEEEcChHHhc--cCCCcccCCCCEEEECCCcCCCCCCCCCCCchHHHhh-HHHHh
Confidence 9 89999976 489999999988 433221 111123445677776 7888888889999999997 77777
Q ss_pred HH----------------------------HHHHhhccCcCChHHH-HHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHH
Q 012785 308 KM----------------------------TKYIELNTIGVSKDSQ-LRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMS 358 (456)
Q Consensus 308 ~l----------------------------~~~~~~~~~~~s~~~q-~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~ 358 (456)
.+ +........+.+...| .++...++.+ + ++.+++.++++.
T Consensus 289 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~--~--------~~g~~~~~~~~~ 358 (447)
T PRK00451 289 QMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLL--G--------PEGLRELAEQNH 358 (447)
T ss_pred hCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHH--C--------HHHHHHHHHHHH
Confidence 63 1111112233333334 3333334321 1 456888999999
Q ss_pred HHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEe-ecCCCCCC-CCCeEEEE
Q 012785 359 TRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILT-RSGKHFGF-SPKYVRIS 436 (456)
Q Consensus 359 ~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v-~pg~~fg~-~~~~iRis 436 (456)
++++++.+.|++++++++. .+.+.. ++.++++.+.+.+.+.|.++||.+ .++..|+. ..+++|++
T Consensus 359 ~~~~~l~~~L~~~~g~~~~--~~~~~~-----------~~~v~~~~~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs 425 (447)
T PRK00451 359 QKAHYLAERLAEIGGVELF--DGPFFN-----------EFVVRLPKPAEEVNEALLEKGILGGYDLGRYYPELGNHLLVC 425 (447)
T ss_pred HHHHHHHHHHhhcCCEEec--CCCeEE-----------EEEEecCCCHHHHHHHHHhcCCCCCcccccccCCcCCEEEEe
Confidence 9999999999988766553 233300 223555435567788888888763 45666642 25799999
Q ss_pred ec--CChhHHHHHHHHHHhhhC
Q 012785 437 ML--DRDENYNLFVQRLSKILS 456 (456)
Q Consensus 437 ~~--~~~e~i~~~l~~L~~~l~ 456 (456)
+. .++++++++++.|++++.
T Consensus 426 ~~~~~t~e~i~~l~~~L~~~~~ 447 (447)
T PRK00451 426 VTEKRTKEDIDALVAALGEVLA 447 (447)
T ss_pred cCCCCCHHHHHHHHHHHHHHhC
Confidence 86 489999999999998763
No 184
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.88 E-value=5.9e-21 Score=191.53 Aligned_cols=277 Identities=15% Similarity=0.150 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhc---CCCCCCCcEEEEeCCCCCChhhh---hhhcCCeEe
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALS---SQDASEPISVVSAAPYYSSYPSI---TDCVKSRLY 216 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~---~~gd~~~~~Vlv~~P~y~~~~~~---~~~~g~~~~ 216 (456)
.++|+.++++++. ++++|++|+|+++++++++..+. .+++ +|++....|+.+... ++..|.++.
T Consensus 45 ~~~r~~la~~~g~------~~~~i~~t~~~t~a~~~al~~~~~~~~~~~----~vv~~~~~~~s~~~~~~~~~~~G~~v~ 114 (379)
T TIGR03402 45 EEAREQVAKLLGA------EPDEIIFTSGGTESDNTAIKSALAAQPEKR----HIITTAVEHPAVLSLCQHLEKQGYKVT 114 (379)
T ss_pred HHHHHHHHHHhCC------CCCeEEEeCcHHHHHHHHHHHHHHhcCCCC----eEEEcccccHHHHHHHHHHHHcCCEEE
Confidence 5677778888764 45789999999999999998764 3456 899988888766543 334588888
Q ss_pred eeccC------cccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcEEE
Q 012785 217 KWAGD------AKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHDLML 281 (456)
Q Consensus 217 ~~~~d------~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i~i 281 (456)
.++.+ .+.++. .+++++++++++||||.+++ ++|+++|+++|+|+++.... .++. ...+-++++
T Consensus 115 ~v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~-~~~~~~~~~~D~~~ 193 (379)
T TIGR03402 115 YLPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGK-IPIDLKEMNIDMLS 193 (379)
T ss_pred EEccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccc-cccCcccCCCCEEE
Confidence 77654 333332 36789999999999999988 38899999999999998532 2222 223457888
Q ss_pred ecCccccCCCCceEEEEEEeCHHHHHHHHHHH-------hhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHH
Q 012785 282 FTVSKSTGHAGTRIGWALVKDMEVAKKMTKYI-------ELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTN 354 (456)
Q Consensus 282 ~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~-------~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~ 354 (456)
.|..|.+|.+| +|+++++ ++.. +.... .......+.....++.+.++.. .++++...
T Consensus 194 ~s~~K~~gp~G--~g~l~v~-~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~-----------~~~~~~~~ 257 (379)
T TIGR03402 194 LSGHKLHGPKG--VGALYIR-KGTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELA-----------TEHLEEEN 257 (379)
T ss_pred EcHHHcCCCCc--eEEEEEC-CCCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHH-----------HHhHHHHH
Confidence 88999888677 8888886 4321 11111 0112233444444455555521 34567777
Q ss_pred HHHHHHHHHHHHHHHh-cCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCC----
Q 012785 355 HQMSTRWKQLRMAVQK-SGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFS---- 429 (456)
Q Consensus 355 ~~~~~~~~~l~~~L~~-~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~---- 429 (456)
+++++.++.+.+.|++ ++.+.+..+.... .+....+|++.. +.+.+...|.++||.+++|..|...
T Consensus 258 ~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~l~~~gI~v~~g~~c~~~~~~~ 328 (379)
T TIGR03402 258 TRVRALRDRLEAGLLARIPDARLNGDPTKR--------LPNTVNISFEYI-EGEAILLLLDMEGICASSGSACTSGSLEP 328 (379)
T ss_pred HHHHHHHHHHHHHHHhhCCCEEEeCCCccC--------CCCEEEEEecCC-CHHHHHHhhccCCEEEEchhhcCCCCCCc
Confidence 8888889999998885 6655554322100 011113455433 4567778888999999999877321
Q ss_pred --------------CCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 430 --------------PKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 430 --------------~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
.+.+|+|+.. +++|++++++.|++++
T Consensus 329 ~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~ 370 (379)
T TIGR03402 329 SHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPII 370 (379)
T ss_pred CHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 3689999875 8999999999998875
No 185
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.88 E-value=1.7e-20 Score=188.45 Aligned_cols=290 Identities=14% Similarity=0.146 Sum_probs=191.5
Q ss_pred ccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCC----CCh
Q 012785 129 SYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYY----SSY 204 (456)
Q Consensus 129 ~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y----~~~ 204 (456)
+.|+.+. ..+|++.+|++.+. ++.+++++++.++..++.+++++|| +|+++...| ..+
T Consensus 65 ~r~~~p~------~~~le~~lA~l~g~--------~~al~~~sG~~Ai~~~l~all~~Gd----~Vl~~~~~~~~t~~~~ 126 (403)
T PRK07810 65 SRYGNPT------VSMFEERLRLIEGA--------EACFATASGMSAVFTALGALLGAGD----RLVAARSLFGSCFVVC 126 (403)
T ss_pred eCCCCch------HHHHHHHHHHHhCC--------CcEEEECChHHHHHHHHHHHhCCCC----EEEEccCCcchHHHHH
Confidence 3466665 48999999999863 3666777777898889988999999 999988555 444
Q ss_pred hhhhhhcCCeEeeecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCC-CCCCCC
Q 012785 205 PSITDCVKSRLYKWAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQY-TSITYP 274 (456)
Q Consensus 205 ~~~~~~~g~~~~~~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~-~~~~~~ 274 (456)
...++..|+++..++. |.+.++. .++++|++++|+||||.+.+ ++|+++++++|+|++|..+.. .++ .
T Consensus 127 ~~~~~~~G~~v~~vd~~d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~--~ 204 (403)
T PRK07810 127 NEILPRWGVETVFVDGEDLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRGL--P 204 (403)
T ss_pred HHHHHHcCcEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCChh--h
Confidence 5566778999887765 4455543 36799999999999999876 378999999999999985422 233 2
Q ss_pred CCCcEEEecCccccCCCCceE-EEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHH
Q 012785 275 ADHDLMLFTVSKSTGHAGTRI-GWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFT 353 (456)
Q Consensus 275 ~~~~i~i~S~SK~~g~~G~Ri-G~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~ 353 (456)
.+.+++++|++|.++..|.++ ||++++++.+.++++..........+++.++++...|+ .+...
T Consensus 205 ~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~---------------tl~~R 269 (403)
T PRK07810 205 LGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLE---------------TLALR 269 (403)
T ss_pred cCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccC---------------cHHHH
Confidence 356899999999998789998 77877633344456665555566788888887777665 34455
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCCcc----cccccccCCCCCceEEeecCc----cHHHHHHHHHhCC--------
Q 012785 354 NHQMSTRWKQLRMAVQKSGLFSVPELPSQF----CTFLGRAFEPQPAFAWLKCEQ----EIEDCESFLKGNK-------- 417 (456)
Q Consensus 354 ~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~----~~~~~~~~~~~~~f~~~~~~~----~~~~~~~~l~~~g-------- 417 (456)
.++..++...+.+.|++++.+.....+|.- +...++.....+..+.+++++ +.+.+.+.+..-.
T Consensus 270 ~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~~l~l~~~~~sl 349 (403)
T PRK07810 270 VRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLDKLRVIDISNNL 349 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHHhCCceEEeccC
Confidence 566667777788899988765433322110 001111111223345556653 2344444444322
Q ss_pred -----EEeecCC----CC--------CCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 418 -----ILTRSGK----HF--------GFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 418 -----I~v~pg~----~f--------g~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
+...|+. .+ |..++.+|||++. |+.+.+++.|.+.|
T Consensus 350 G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svGl--E~~~dli~dl~~Al 402 (403)
T PRK07810 350 GDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVGL--EDTDDLIADLDRAL 402 (403)
T ss_pred CCCcceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHhh
Confidence 2233332 11 2235789999854 45666777777654
No 186
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.88 E-value=6.3e-21 Score=191.87 Aligned_cols=257 Identities=16% Similarity=0.148 Sum_probs=176.5
Q ss_pred ceEEEccCHHHHHHHHHHHhcC----CCC-CCCcEEEEeCCCCCChhhhhhhcCC---------------eEeeeccCcc
Q 012785 164 HHIVVGTGSTQLFQAALYALSS----QDA-SEPISVVSAAPYYSSYPSITDCVKS---------------RLYKWAGDAK 223 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~----~gd-~~~~~Vlv~~P~y~~~~~~~~~~g~---------------~~~~~~~d~~ 223 (456)
+.+++++++++|++.+++.... .|. ....+|+...-+|++....+..... ..++++ |.+
T Consensus 99 ~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-d~~ 177 (408)
T PRK04612 99 EKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFN-DVE 177 (408)
T ss_pred CEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCC-CHH
Confidence 6899999999999999987653 121 0011799999999998765443211 111222 444
Q ss_pred cccc---CCCeEEEEcCCCCCCcccch----------HHhhhcCcEEEeeecCCCCCCCCCC---CCCCCcEEEecCccc
Q 012785 224 RFNK---DGPYIELVTSPNNPDGSVRQ----------SVVNRSGGILVHDLAYYWPQYTSIT---YPADHDLMLFTVSKS 287 (456)
Q Consensus 224 ~l~~---~~~~~i~v~~P~NPtG~~~~----------~l~~~~~~~iI~De~y~~~~~~~~~---~~~~~~i~i~S~SK~ 287 (456)
.++. .+..+.++..|.+++|.+++ ++|+++|+++|+||+|.+..+.+.. ...+.+..+.||||.
T Consensus 178 ~l~~~~~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~ 257 (408)
T PRK04612 178 ALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKA 257 (408)
T ss_pred HHHHhhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcch
Confidence 4432 23345556688888887765 2899999999999999875444421 123456778999999
Q ss_pred cCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 012785 288 TGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMA 367 (456)
Q Consensus 288 ~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 367 (456)
++ +|+|+||++++ +++++.+.......+++.+++.+.++.+.|+.+.+. ...++++++.+.+.+.
T Consensus 258 l~-~G~piga~~~~-~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~-------------~l~~~~~~~g~~l~~~ 322 (408)
T PRK04612 258 LG-GGFPIGAMLAG-PKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASP-------------QIAANVARQSAALRAG 322 (408)
T ss_pred hc-CCCceEEEEEC-HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhc-------------cHHHHHHHHHHHHHHH
Confidence 99 99999999997 888888776555678889999999999999876542 2334444444444444
Q ss_pred HHh----cCCccccCCCCcccccccccCCCCCceEEeecC----ccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEec-
Q 012785 368 VQK----SGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE----QEIEDCESFLKGNKILTRSGKHFGFSPKYVRISML- 438 (456)
Q Consensus 368 L~~----~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~----~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~- 438 (456)
|++ .+.+...++.|.+ +.+.+. .....+.+.+.++||.+.+. +.+.+|+...
T Consensus 323 l~~l~~~~~~i~~vrg~Gl~--------------~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~-----g~~~lRl~Ppl 383 (408)
T PRK04612 323 LEALNAEFGVFAQVRGRGLM--------------LGAVLAPAHAGQAGAILDLAAEHGLLLLQA-----GPDVLRFVPAL 383 (408)
T ss_pred HHHHHhhCCCeeeeeccceE--------------EEEEecCchhhHHHHHHHHHHHCCeEEeeC-----CCCEEEEcCCc
Confidence 443 3333344555544 444442 12456778889999999872 3578999843
Q ss_pred -CChhHHHHHHHHHHhhh
Q 012785 439 -DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 439 -~~~e~i~~~l~~L~~~l 455 (456)
.+++++++++++|.+.+
T Consensus 384 ~it~eeid~~l~~l~~~l 401 (408)
T PRK04612 384 NLTDAELADGLARLRLAL 401 (408)
T ss_pred cCCHHHHHHHHHHHHHHH
Confidence 48999999999998876
No 187
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.88 E-value=6.1e-20 Score=183.63 Aligned_cols=288 Identities=15% Similarity=0.168 Sum_probs=190.3
Q ss_pred ccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCCh----
Q 012785 129 SYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSY---- 204 (456)
Q Consensus 129 ~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~---- 204 (456)
++|+.+. ..+|++.++++.+. +.+++++++++++.+++.+++++|| +|+++.+.|...
T Consensus 49 ~r~~~p~------~~~le~~la~l~g~--------~~~~~~~sG~~Ai~~al~al~~~Gd----~Vl~~~~~~~~t~~~~ 110 (380)
T TIGR01325 49 SRYANPT------VAAFEERIAALEGA--------ERAVATATGMSAIQAALMTLLQAGD----HVVASRSLFGSTVGFI 110 (380)
T ss_pred ecCCCch------HHHHHHHHHHHhCC--------CcEEEECCHHHHHHHHHHHHhCCCC----EEEEecCCcchHHHHH
Confidence 3466554 48999999998853 4678899999999999999999999 999999988763
Q ss_pred hhhhhhcCCeEeeeccC-cccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC-CCCCCCC
Q 012785 205 PSITDCVKSRLYKWAGD-AKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ-YTSITYP 274 (456)
Q Consensus 205 ~~~~~~~g~~~~~~~~d-~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~-~~~~~~~ 274 (456)
...++..|.++..++.+ .+.++. .++++|++++|+||+|.+.+ ++|+++|+++|+|++|..+. ..++ .
T Consensus 111 ~~~~~~~g~~v~~v~~~d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~pl--~ 188 (380)
T TIGR01325 111 SEILPRFGIEVSFVDPTDLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQPL--K 188 (380)
T ss_pred HHHHHHhCCEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCch--h
Confidence 33556678888777653 455543 36799999999999999976 48899999999999997532 2222 2
Q ss_pred CCCcEEEecCccccCCCCceE-EEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHH
Q 012785 275 ADHDLMLFTVSKSTGHAGTRI-GWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFT 353 (456)
Q Consensus 275 ~~~~i~i~S~SK~~g~~G~Ri-G~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~ 353 (456)
.+.+|++.|+||.++.+|.++ |+++++ +++++.++..........++.....+...+ +.+...
T Consensus 189 ~g~Divv~S~sK~l~g~g~~~gG~vv~~-~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l---------------~tl~~r 252 (380)
T TIGR01325 189 LGADVVVYSATKHIDGQGRVMGGVIAGS-EELMAEVAVYLRHTGPAMSPFNAWVLLKGL---------------ETLSLR 252 (380)
T ss_pred hCCCEEEeeccceecCCCCeEEEEEEeC-HHHHHHHHHHHHhhCCCCCHHHHHHHHhcc---------------CcHHHH
Confidence 356799999999998788887 667765 888888887765444445555444333322 345556
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCCc----ccccccccCCCCCceEEeecCccHHHHHHHHHhCCE---EeecCCC-
Q 012785 354 NHQMSTRWKQLRMAVQKSGLFSVPELPSQ----FCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKI---LTRSGKH- 425 (456)
Q Consensus 354 ~~~~~~~~~~l~~~L~~~~~~~~~~~~g~----~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI---~v~pg~~- 425 (456)
.++..++++.+.+.|++++.++....++. .+...++.....+..+.+.++ +.+.+.+.+..-.+ .+.-|..
T Consensus 253 ~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~-~~~~~~~f~~~l~~~~~~~s~G~~~ 331 (380)
T TIGR01325 253 MQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA-DRAAAWKVLDAVELVSITNNLGDAK 331 (380)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC-CHHHHHHHHHcCCcceEcccCCCCC
Confidence 67777888899999998875543222110 011111222223345666775 33434444433332 2211210
Q ss_pred ---------------------CCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 426 ---------------------FGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 426 ---------------------fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
.|..++.||||++. |+.+.+++.|++.|
T Consensus 332 sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al 380 (380)
T TIGR01325 332 STITHPATTTHGRMQPEERAAAGIGDGLVRLSVGL--EDVDDLIADLKRAL 380 (380)
T ss_pred eeeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHhhC
Confidence 11135789999854 34566677776653
No 188
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=4.4e-20 Score=185.06 Aligned_cols=212 Identities=10% Similarity=0.097 Sum_probs=160.7
Q ss_pred ccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhh--
Q 012785 129 SYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPS-- 206 (456)
Q Consensus 129 ~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~-- 206 (456)
+.|+++. ..+|++.++++.+ .+++++++|+++++.+++.+++++|| +|++++|+|..+..
T Consensus 60 ~r~~~pt------~~~Le~~lA~l~g--------~~~~l~~~sgt~Ai~~~l~al~~~GD----~Vl~~~~~y~~~~~~~ 121 (394)
T PRK07050 60 GLHATPT------SLALAQRLAEIEG--------GRHALLQPSGLAAISLVYFGLVKAGD----DVLIPDNAYGPNRDHG 121 (394)
T ss_pred CCCCCHH------HHHHHHHHHHHhC--------CCeEEEeccHHHHHHHHHHHHhCCCC----EEEEecCCcccHHHHH
Confidence 3455554 4788888888875 35899999999999999999999999 99999999998764
Q ss_pred --hhhhcCCeEeeeccC-ccccc---cCCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC-CCCCCCC
Q 012785 207 --ITDCVKSRLYKWAGD-AKRFN---KDGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ-YTSITYP 274 (456)
Q Consensus 207 --~~~~~g~~~~~~~~d-~~~l~---~~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~-~~~~~~~ 274 (456)
.+...|+++..++.+ .+.++ ..++++|++++|+||+|...+ ++|+++|+++|+|++|..+. +.++ .
T Consensus 122 ~~~~~~~Gi~v~~vd~~~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~~~l--~ 199 (394)
T PRK07050 122 EWLARDFGITVRFYDPLIGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAFKPF--E 199 (394)
T ss_pred HHHHHhcCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccccCHH--H
Confidence 456679888877542 23343 246899999999999998765 37889999999999997532 2232 2
Q ss_pred CCCcEEEecCccccC-CCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHH
Q 012785 275 ADHDLMLFTVSKSTG-HAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFT 353 (456)
Q Consensus 275 ~~~~i~i~S~SK~~g-~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~ 353 (456)
.+.+|++.|+||.++ +.+++.|++++.+++++++++..+.....+.++.....+...|+ .+...
T Consensus 200 ~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~---------------tl~~R 264 (394)
T PRK07050 200 HGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLP---------------SLQVR 264 (394)
T ss_pred cCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCC---------------cHHHH
Confidence 345799999999995 56678999998778999999888776677788777665554443 22234
Q ss_pred HHHHHHHHHHHHHHHHhcCCcc
Q 012785 354 NHQMSTRWKQLRMAVQKSGLFS 375 (456)
Q Consensus 354 ~~~~~~~~~~l~~~L~~~~~~~ 375 (456)
.++..++...+.+.|++++.+.
T Consensus 265 l~~~~~~a~~la~~L~~~p~v~ 286 (394)
T PRK07050 265 LAAHDRSALEVAEWLKARPEIA 286 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCCcc
Confidence 4555666678889999886544
No 189
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.87 E-value=1e-20 Score=191.18 Aligned_cols=252 Identities=13% Similarity=0.071 Sum_probs=171.0
Q ss_pred ceEEEccCHHHHHHHHHHHhcC----------CCCCCCcEEEEeCCCCCChhhhhhhcCC---------------eEeee
Q 012785 164 HHIVVGTGSTQLFQAALYALSS----------QDASEPISVVSAAPYYSSYPSITDCVKS---------------RLYKW 218 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~----------~gd~~~~~Vlv~~P~y~~~~~~~~~~g~---------------~~~~~ 218 (456)
+.+++++++++|.+.+++.+.. .++ +|++.+-.|++.......... ..+++
T Consensus 89 ~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~----~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (400)
T PTZ00125 89 DKVLPMNSGAEAGETALKFARKWGYEVKGIPENQA----KIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDY 164 (400)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCC----eEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCC
Confidence 4788999999999999997742 223 799999999887654433211 11122
Q ss_pred ccCcccccc----CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCC--CC---CCCCCcEE
Q 012785 219 AGDAKRFNK----DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTS--IT---YPADHDLM 280 (456)
Q Consensus 219 ~~d~~~l~~----~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~--~~---~~~~~~i~ 280 (456)
.|.+.++. .++++|+++.++||||.+++ ++|+++|+++|+||+|.+..+.+ +. .....++
T Consensus 165 -~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~- 242 (400)
T PTZ00125 165 -NDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDI- 242 (400)
T ss_pred -CCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCE-
Confidence 15555542 35788989888999999886 27999999999999997543322 11 1111223
Q ss_pred EecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHH
Q 012785 281 LFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTR 360 (456)
Q Consensus 281 i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 360 (456)
.++||.++.+++|+||++++ +++++.+.......+++.+++.|.++.+.|+.+.++ + ..++.+++
T Consensus 243 -~~~sK~l~~g~~~ig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~---------~----~~~~~~~~ 307 (400)
T PTZ00125 243 -VLLGKALSGGLYPISAVLAN-DDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEE---------K----LAENAQRL 307 (400)
T ss_pred -EEEcccccCCCcCcEEEEEc-HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc---------C----HHHHHHHH
Confidence 35789998433599999997 889888876555567889999999998888765432 1 22333344
Q ss_pred HHHHHHHHHhc----CCccccCCCCcccccccccCCCCCceEEeecCc----cHHHHHHHHHhCCEEeecCCCCCCCCCe
Q 012785 361 WKQLRMAVQKS----GLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----EIEDCESFLKGNKILTRSGKHFGFSPKY 432 (456)
Q Consensus 361 ~~~l~~~L~~~----~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----~~~~~~~~l~~~gI~v~pg~~fg~~~~~ 432 (456)
.+.+.+.|++. +.+...++.|. +.|+.++. ....+.+.|.++||.+.|+ ..++
T Consensus 308 ~~~l~~~l~~l~~~~~~~~~~~~~g~--------------~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~~-----~~~~ 368 (400)
T PTZ00125 308 GEVFRDGLKELLKKSPWVKEIRGKGL--------------LNAIVFDHSDGVNAWDLCLKLKENGLLAKPT-----HDNI 368 (400)
T ss_pred HHHHHHHHHHHHhcCCCeEEEecccE--------------EEEEEEccCcchHHHHHHHHHHHCCeEEeec-----CCCE
Confidence 44455555442 32222333333 56776642 3455667778899999985 3679
Q ss_pred EEEEec--CChhHHHHHHHHHHhhh
Q 012785 433 VRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 433 iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
|||+.. .+++++++++++|.+++
T Consensus 369 lRi~~~~~~~~~~i~~~l~~l~~~l 393 (400)
T PTZ00125 369 IRFAPPLVITKEQLDQALEIIKKVL 393 (400)
T ss_pred EEEECCccCCHHHHHHHHHHHHHHH
Confidence 999953 59999999999998875
No 190
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.87 E-value=1.5e-20 Score=192.07 Aligned_cols=261 Identities=15% Similarity=0.073 Sum_probs=171.4
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhcCCe--------------E--eeecc---Ccc
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCVKSR--------------L--YKWAG---DAK 223 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~--------------~--~~~~~---d~~ 223 (456)
+.++++++++||.+.+++.... .|.. +|+...-+|++....+...... + ++++. ...
T Consensus 116 ~~v~f~~sGseA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (451)
T PRK06918 116 KKVLFLNSGAEAVENAVKIARKYTKRQ---GIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPE 192 (451)
T ss_pred CEEEEcCCcHHHHHHHHHHHHHHhCCC---cEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccc
Confidence 5899999999999999987643 2222 7999999999987655443110 0 11110 000
Q ss_pred -------------cc--------ccCCCeEEEEcCCCCCC-cccch---------HHhhhcCcEEEeeecCCCCCCCCCC
Q 012785 224 -------------RF--------NKDGPYIELVTSPNNPD-GSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT 272 (456)
Q Consensus 224 -------------~l--------~~~~~~~i~v~~P~NPt-G~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~ 272 (456)
.+ ...+..++++ .|-+.. |.+++ ++|+++|+++|+||+|.+..+.+..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~-EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~ 271 (451)
T PRK06918 193 GLTEEQYDDFMIEEFKNFFISEVAPETIAAVVM-EPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKY 271 (451)
T ss_pred cCchHHHHHHHHHHHHHHHHhhcCCCceEEEEE-CcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCce
Confidence 01 1123445555 665555 55454 2899999999999999975443311
Q ss_pred ---CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhH
Q 012785 273 ---YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECF 349 (456)
Q Consensus 273 ---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~ 349 (456)
...+..--+.||||.++ +|+|+||++++ +++++.+.......+++.++++|.++.++|+.+.++. ..++
T Consensus 272 ~a~~~~~v~pDi~t~sK~l~-~G~pig~v~~~-~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~------~~~~ 343 (451)
T PRK06918 272 FAIEHFDVVPDLITVSKSLG-AGVPISGVIGR-KEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKEN------LNDR 343 (451)
T ss_pred ehhHhcCCCCCEEeeehhhc-CCCccEEEEEc-HHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCC------HHHH
Confidence 11111111668999999 99999999997 8998888766666789999999999999998765441 2344
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeec-------Cc--cHHHHHHHHHhCCEEe
Q 012785 350 FEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKC-------EQ--EIEDCESFLKGNKILT 420 (456)
Q Consensus 350 l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~-------~~--~~~~~~~~l~~~gI~v 420 (456)
++.+.+.++++.+ +..++++.+...++.|++ |.|... ++ ....+.+.+.++||.+
T Consensus 344 ~~~~g~~l~~~l~---~l~~~~~~~~~vrg~G~~-------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv 407 (451)
T PRK06918 344 AIELGKVVMNRFE---EMKNKYNCIGDVRGLGAM-------------CAFELVQDRKTKEPDKTLTANICKEANKRGLLL 407 (451)
T ss_pred HHHHHHHHHHHHH---HHHhhCCCceeeccceeE-------------EEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEE
Confidence 4444444443333 222233433344556766 554432 11 1345666778999999
Q ss_pred ecCCCCCCCCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 421 RSGKHFGFSPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 421 ~pg~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
.|+..|+ +++|++++ .+++++++++++|.+++
T Consensus 408 ~~~~~~~---~~lrl~p~l~~t~~~id~~l~~l~~~l 441 (451)
T PRK06918 408 LSAGTYG---NVIRVLMPLVITDEQLEEGLTIIEESL 441 (451)
T ss_pred eecCCCC---CEEEEECCCccCHHHHHHHHHHHHHHH
Confidence 9987663 78999975 48999999999999876
No 191
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.87 E-value=2.2e-20 Score=188.18 Aligned_cols=268 Identities=17% Similarity=0.139 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcC-------CCCCCCcEEEEeCCCCCChhhhhhhcCC--
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSS-------QDASEPISVVSAAPYYSSYPSITDCVKS-- 213 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~-------~gd~~~~~Vlv~~P~y~~~~~~~~~~g~-- 213 (456)
.+|.+.++++.. .+.+++++++++|++.+++.+.. ++.. +|+..+-+|++....+...+.
T Consensus 80 ~~la~~L~~~~~--------~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~---~ii~~~~~yHG~~~~~~~~~~~~ 148 (397)
T TIGR03246 80 LRLAKKLVDATF--------ADKVFFCNSGAEANEAALKLARRYALDKHGADKS---EIVAFKNSFHGRTLFTVSVGGQP 148 (397)
T ss_pred HHHHHHHHhhCC--------CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCC---EEEEECCCcCCccHHHHHhcCCc
Confidence 456666665432 35899999999999999997731 2221 799999999987644433221
Q ss_pred -----------eEeeec-cCcccccc---CCCeEEEEcCCCCCCcccc-h--------HHhhhcCcEEEeeecCCCCCCC
Q 012785 214 -----------RLYKWA-GDAKRFNK---DGPYIELVTSPNNPDGSVR-Q--------SVVNRSGGILVHDLAYYWPQYT 269 (456)
Q Consensus 214 -----------~~~~~~-~d~~~l~~---~~~~~i~v~~P~NPtG~~~-~--------~l~~~~~~~iI~De~y~~~~~~ 269 (456)
.+..++ .|.+.++. +++++|+++.++++.|... + ++|+++|+++|.||+|.+.+++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~ 228 (397)
T TIGR03246 149 KYSQGFAPLPGGIKHAPYNDLAAAKALISDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRT 228 (397)
T ss_pred ccccCCCCCCCceEEeCCCCHHHHHHHhccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCcc
Confidence 111222 15555543 3567777765555556553 2 3899999999999999765443
Q ss_pred CCC---CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcc
Q 012785 270 SIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSED 346 (456)
Q Consensus 270 ~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~ 346 (456)
+.. ...+-..-+.||||.+| .|+|+||++++ +++++.+.......+++.+++++.++.+.|+.+.+
T Consensus 229 G~~~a~~~~gv~pDi~t~~K~lg-gG~pigav~~~-~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~--------- 297 (397)
T TIGR03246 229 GELYAYMHYGVTPDILTSAKALG-GGFPIGAMLTT-TEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNT--------- 297 (397)
T ss_pred ccchhhhhcCCCCCEEEeehhhh-CCcceeEEEEc-HHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhh---------
Confidence 321 11111122448999998 89999999997 88988886554556788899999999999985422
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcC----CccccCCCCcccccccccCCCCCceEEeecC----ccHHHHHHHHHhCCE
Q 012785 347 ECFFEFTNHQMSTRWKQLRMAVQKSG----LFSVPELPSQFCTFLGRAFEPQPAFAWLKCE----QEIEDCESFLKGNKI 418 (456)
Q Consensus 347 ~~~l~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~----~~~~~~~~~l~~~gI 418 (456)
+...+.++++.+++.+.|+++. .+...++.|. ++.+.+. .....+.+.|.++||
T Consensus 298 ----~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~--------------~~~i~~~~~~~~~~~~~~~~l~~~Gv 359 (397)
T TIGR03246 298 ----PELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGL--------------LIGAVLTEAYQGKAKQFVNAAAEEGV 359 (397)
T ss_pred ----ccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCce--------------EEEEEEcCchhhHHHHHHHHHHHCCe
Confidence 2356677777888888777643 1222223333 3344442 134567778889999
Q ss_pred EeecCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhh
Q 012785 419 LTRSGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 419 ~v~pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l 455 (456)
.+.+. +.+++|++ +..+++++++++++|.+++
T Consensus 360 ~~~~~-----g~~~lR~~p~~~~t~~~i~~~~~~l~~~l 393 (397)
T TIGR03246 360 IALIA-----GPNVVRFAPSLVISDDDIDEGLARFERAI 393 (397)
T ss_pred EEeec-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 99872 25789995 5459999999999999876
No 192
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.86 E-value=1.4e-19 Score=181.71 Aligned_cols=289 Identities=10% Similarity=0.100 Sum_probs=197.7
Q ss_pred cccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhh
Q 012785 130 YFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITD 209 (456)
Q Consensus 130 ~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~ 209 (456)
+|+...+ ..+|++++|++++. ++.+++++|.+... .++.++.++|| .|+++++.|+.+...+.
T Consensus 38 ~yg~~~~-----~~~LE~~lA~~~g~-------e~al~~~sG~~a~~-~~i~~l~~~GD----~Vl~~~~~h~s~~~~~~ 100 (392)
T PLN03227 38 FYGTIDA-----HLELEQCMAEFLGT-------ESAILYSDGASTTS-STVAAFAKRGD----LLVVDRGVNEALLVGVS 100 (392)
T ss_pred ccCChHH-----HHHHHHHHHHHhCC-------CcEEEecCcHHHHH-HHHHHhCCCCC----EEEEeccccHHHHHHHH
Confidence 4665555 58999999999975 46788888887776 66677899999 99999999999988877
Q ss_pred hcCCeEeeecc-Ccccccc-----------------CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCC
Q 012785 210 CVKSRLYKWAG-DAKRFNK-----------------DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWP 266 (456)
Q Consensus 210 ~~g~~~~~~~~-d~~~l~~-----------------~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~ 266 (456)
..+.+++.++. |.+.++. .++++|++.+|+||+|.+.+ ++|+++|+++|.||+|...
T Consensus 101 l~~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g 180 (392)
T PLN03227 101 LSRANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFG 180 (392)
T ss_pred HcCCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECccccc
Confidence 77777765543 3322211 24688999999999999977 4899999999999999721
Q ss_pred --CCC--C------CCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCC--hHHHHHHHHHHHh
Q 012785 267 --QYT--S------ITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVS--KDSQLRAAKVLKV 334 (456)
Q Consensus 267 --~~~--~------~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s--~~~q~~a~~~L~~ 334 (456)
+.. + +....+.+|++.|+||.+|. +.||++++ +++++.++......+++.+ +..+.++.+.+..
T Consensus 181 ~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~---~gg~v~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~ 256 (392)
T PLN03227 181 TLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGS---VGGMTVGS-EEVVDHQRLSGSGYCFSASAPPFLAKADATATAG 256 (392)
T ss_pred ccCCCCCcHHHHcCCCCCCCceEEEeechhhhhc---cCcEEecC-HHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHH
Confidence 111 1 11123458999999998763 45898886 8888777655444455654 6667777766653
Q ss_pred hhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCcc---------
Q 012785 335 VSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQE--------- 405 (456)
Q Consensus 335 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~--------- 405 (456)
+.. .+..+++++++.+++.+.|++.+.-.+....|++. -.....++.+.+.+.+.
T Consensus 257 ~~~------------~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~----~~~~~~~~i~~i~~~~~~~~~~~~~~ 320 (392)
T PLN03227 257 ELA------------GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLV----ITSDPISPIIYLRLSDQEATRRTDET 320 (392)
T ss_pred Hhc------------CHHHHHHHHHHHHHHHHHHHhcCCccccccccccc----cCCCCCCCEEEEEeCCHHHhhhhhhh
Confidence 211 13467778888889999887532111111122210 00122344555666431
Q ss_pred --HHHHHHHHHhCCEEeecCCC-----CC-CCCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 406 --IEDCESFLKGNKILTRSGKH-----FG-FSPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 406 --~~~~~~~l~~~gI~v~pg~~-----fg-~~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
...+.+.+.++||.+.+... +. .++..+|+++.. ++|++++++++|++++
T Consensus 321 ~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~ 380 (392)
T PLN03227 321 LILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAV 380 (392)
T ss_pred hHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 13677888899999975321 11 246789999875 9999999999999876
No 193
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.86 E-value=2.3e-19 Score=181.53 Aligned_cols=271 Identities=17% Similarity=0.136 Sum_probs=186.4
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcC--CCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeec
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSS--QDASEPISVVSAAPYYSSYPSITDCVKSRLYKWA 219 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~--~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~ 219 (456)
..+|++.++++++. ++.+++++|+ +++..++..+.. +|+ .|++....|..........|.++..++
T Consensus 92 ~~~le~~la~~~g~-------~~~~~~~SG~-~An~~ai~~l~~~~~g~----~I~~~~~~H~s~~~~~~~~g~~~~~~~ 159 (406)
T PRK13393 92 HVLLEAELADLHGK-------EAALLFTSGY-VSNWAALSTLGSRLPGC----VILSDELNHASMIEGIRHSRAEKRIFR 159 (406)
T ss_pred HHHHHHHHHHHhCC-------CcEEEeCCcH-HHHHHHHHHhhcCCCCC----EEEEccchhHHHHHHHHHcCCeEEEeC
Confidence 36788888888752 3456666665 688888887765 566 666666666666666677787776665
Q ss_pred -cCcccccc-------CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCC----CCCCCCCC---CC-CCCc
Q 012785 220 -GDAKRFNK-------DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYY----WPQYTSIT---YP-ADHD 278 (456)
Q Consensus 220 -~d~~~l~~-------~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~----~~~~~~~~---~~-~~~~ 278 (456)
.|.+.++. .++++|++++++||+|.+.+ ++|+++++++|+||+|. ++...++. .. .+.+
T Consensus 160 ~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~ 239 (406)
T PRK13393 160 HNDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLT 239 (406)
T ss_pred CCCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCe
Confidence 24443321 25678999999999999987 38999999999999997 22111111 11 2246
Q ss_pred EEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhh--ccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHH
Q 012785 279 LMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIEL--NTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQ 356 (456)
Q Consensus 279 i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~--~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~ 356 (456)
|+++||||.+|++| ||++++ +++++.+...... .+.+.++..+.++.+.|+.+.+ .. ..+.+
T Consensus 240 i~~~tlsKa~g~~G---G~~~~~-~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~-----------~~-~~~~~ 303 (406)
T PRK13393 240 IIEGTLAKAFGVMG---GYITGS-AALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKA-----------SS-AERER 303 (406)
T ss_pred EEEEeCchhhcccC---ceeeCC-HHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhh-----------CH-HHHHH
Confidence 88899999999888 999886 8888888776432 2456677778888888874322 11 23456
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHh-CCEEeecCCCCC--CCCC
Q 012785 357 MSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKG-NKILTRSGKHFG--FSPK 431 (456)
Q Consensus 357 ~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~-~gI~v~pg~~fg--~~~~ 431 (456)
++++++++.+.|++.+ +.+.++.+. ++.+.+++ ....+.+.|.+ +||.++++.... .+.+
T Consensus 304 ~~~~~~~l~~~L~~~g-~~~~~~~~~--------------i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~ 368 (406)
T PRK13393 304 HQDRVARLRARLDKAG-IPHLPNPSH--------------IVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTE 368 (406)
T ss_pred HHHHHHHHHHHHHHcC-CCcCCCCCC--------------eEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCc
Confidence 7788889999998764 333333333 44444432 33556666665 699999865332 2347
Q ss_pred eEEEEec--CChhHHHHHHHHHHhhh
Q 012785 432 YVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 432 ~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
++||++. .+++++++++++|++++
T Consensus 369 ~iRis~~~~~t~edid~l~~~l~~~~ 394 (406)
T PRK13393 369 RLRITPSPLHTDADIEHLVQALSEIW 394 (406)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 8999986 38999999999999875
No 194
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.86 E-value=5.4e-20 Score=184.36 Aligned_cols=282 Identities=14% Similarity=0.147 Sum_probs=191.0
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhh----hhhhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPS----ITDCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~----~~~~~g~~~~~ 217 (456)
..++|+.++++++. .++++|++|+|++++++.++.+++++|| +|++..++|+.+.. .++..|.+++.
T Consensus 46 ~~~~~~~la~~~~~-----~~~~~v~~~~g~t~al~~~~~~~~~~gd----~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 116 (376)
T TIGR01977 46 VEETRQLLAKLFNA-----PSSAHVVFTNNATTALNIALKGLLKEGD----HVITTPMEHNSVARPLECLKEQIGVEITI 116 (376)
T ss_pred HHHHHHHHHHHhCc-----CCCCeEEEeCCHHHHHHHHHHhccCCCC----EEEECcchhhHHHHHHHHHHHHcCcEEEE
Confidence 36888999998864 1235899999999999999999989999 99999999987643 44556888876
Q ss_pred eccC------cccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcEEEe
Q 012785 218 WAGD------AKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHDLMLF 282 (456)
Q Consensus 218 ~~~d------~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i~i~ 282 (456)
++.+ .+.++. .+++++++++|+||||.+++ ++|+++|+++|+|+++.-.. .++. ...+-++++.
T Consensus 117 v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~-~~~~~~~~~~D~~~~ 195 (376)
T TIGR01977 117 VKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGV-IPIDMTELAIDMLAF 195 (376)
T ss_pred EecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCc-cCCCchhcCCCEEEe
Confidence 6643 333332 36789999999999999987 38899999999999997422 2221 2235679999
Q ss_pred cCccccCCCCceEEEEEEeCHHHHHHHHHH----------------HhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcc
Q 012785 283 TVSKSTGHAGTRIGWALVKDMEVAKKMTKY----------------IELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSED 346 (456)
Q Consensus 283 S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~----------------~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~ 346 (456)
|+.|.++.|. -+|.+++.+...+..+... ..+.....+.....++.+.++.+.+
T Consensus 196 s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~--------- 265 (376)
T TIGR01977 196 TGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEK--------- 265 (376)
T ss_pred cccccccCCC-CceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHH---------
Confidence 9999875332 2677776533211111100 0001122334444444555553322
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhC-CEEeecCC
Q 012785 347 ECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGN-KILTRSGK 424 (456)
Q Consensus 347 ~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~-gI~v~pg~ 424 (456)
.-.+.++++.++..+.+.+.|.+.+++++..+... ...+..+++.+++ +.+.+.+.|.++ ||.+.+|.
T Consensus 266 -~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~ 335 (376)
T TIGR01977 266 -IGIANIAKKECMLTEKLLNGLREINKVKIYGPADP---------ANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGL 335 (376)
T ss_pred -hCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCc---------cccCCeEEEEECCCCHHHHHHHHhccCCEEEEccc
Confidence 12356677778888888888887765555432100 0112356667654 567788888776 99999988
Q ss_pred CCCC---------CCCeEEEEecC--ChhHHHHHHHHHHh
Q 012785 425 HFGF---------SPKYVRISMLD--RDENYNLFVQRLSK 453 (456)
Q Consensus 425 ~fg~---------~~~~iRis~~~--~~e~i~~~l~~L~~ 453 (456)
.+.. ..+.||+++.. ++++++.++++|++
T Consensus 336 ~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 336 HCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred ccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 6632 45799999875 89999999999986
No 195
>PRK07505 hypothetical protein; Provisional
Probab=99.86 E-value=2.1e-19 Score=181.69 Aligned_cols=271 Identities=10% Similarity=0.095 Sum_probs=172.1
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhc----CCCCCCCcEEEEeCCCCCChhhh---hhhcCCeE
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALS----SQDASEPISVVSAAPYYSSYPSI---TDCVKSRL 215 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~----~~gd~~~~~Vlv~~P~y~~~~~~---~~~~g~~~ 215 (456)
.+|++.++++++ .+.+++++| +++...++..+. .+++. .|++.+..|++.... ....+.++
T Consensus 94 ~~l~~~la~~~~--------~~~~~~~sG-~~a~~~ai~~~~~~~~~~~~~---~vi~~~~~~H~s~~~~~~~~~~~~~v 161 (402)
T PRK07505 94 KDLEEALSELFG--------ASVLTFTSC-SAAHLGILPLLASGHLTGGVP---PHMVFDKNAHASLNILKGICADETEV 161 (402)
T ss_pred HHHHHHHHHHhC--------CCEEEECCh-HHHHHHHHHHHHhcccCCCCC---CEEEEchhhhHhHHhhhhhhhcCCeE
Confidence 566677776653 145656655 467777775543 22331 577888787764321 11124455
Q ss_pred eeecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCC----CC---CC--CCCC-CCC
Q 012785 216 YKWAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYW----PQ---YT--SITY-PAD 276 (456)
Q Consensus 216 ~~~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~----~~---~~--~~~~-~~~ 276 (456)
+.++. |.+.++. .+++++++++|+||||.+++ ++|+++++++|+||+|.. +. +. .+.. .++
T Consensus 162 ~~~~~~d~~~l~~~~~~~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d 241 (402)
T PRK07505 162 ETIDHNDLDALEDICKTNKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNE 241 (402)
T ss_pred EEeCCCCHHHHHHHHhcCCCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCC
Confidence 55543 5555543 24578889999999999987 389999999999999842 11 11 1112 467
Q ss_pred CcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCc--CChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHH
Q 012785 277 HDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIG--VSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTN 354 (456)
Q Consensus 277 ~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~--~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~ 354 (456)
++++++||||.+|.+| ||++++++++++.+.......+++ ++++++.++.+.++...+ +.+.+.+
T Consensus 242 ~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~----------~~~~~~~ 308 (402)
T PRK07505 242 RTIIAASLGKAFGASG---GVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLS----------EELDQLQ 308 (402)
T ss_pred CeEEEEechhhhhccC---eEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhc----------cCcHHHH
Confidence 8999999999999776 898765588998888765544443 345677777777663222 2334455
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCCC--CC
Q 012785 355 HQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFGF--SP 430 (456)
Q Consensus 355 ~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg~--~~ 430 (456)
+.++++.+.+.+.+... ..|.+. .+.++.++. ....+.+.|.++||.++++..+.. +.
T Consensus 309 ~~l~~~~~~~~~~~~~~-------~~g~~~-----------~i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~ 370 (402)
T PRK07505 309 QKLQNNIALFDSLIPTE-------QSGSFL-----------PIRLIYIGDEDTAIKAAKQLLDRGFYTSPVFFPVVAKGR 370 (402)
T ss_pred HHHHHHHHHHHHHHHhc-------CCCCCC-----------CEEEEEeCCHHHHHHHHHHHHHCCCeEeeecCCCCCCCC
Confidence 55666655544433211 112110 023444432 345677888899999999743322 34
Q ss_pred CeEEEEec--CChhHHHHHHHHHHhhhC
Q 012785 431 KYVRISML--DRDENYNLFVQRLSKILS 456 (456)
Q Consensus 431 ~~iRis~~--~~~e~i~~~l~~L~~~l~ 456 (456)
++|||++. .++|++++++++|+++++
T Consensus 371 ~~lRi~~~~~~t~eei~~~~~~l~~~l~ 398 (402)
T PRK07505 371 AGLRIMFRASHTNDEIKRLCSLLKEILD 398 (402)
T ss_pred ceEEEecCccCCHHHHHHHHHHHHHHHH
Confidence 79999987 399999999999998763
No 196
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=1.9e-19 Score=180.48 Aligned_cols=282 Identities=15% Similarity=0.130 Sum_probs=187.6
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChh----hhhhhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYP----SITDCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~----~~~~~~g~~~~~ 217 (456)
..+|++.+|++++. + ..+++++|. .++.+++. ++++|| +|++++|.|+... ..++..|+++..
T Consensus 56 ~~~le~~lA~l~g~------~-~~v~~~sG~-~ai~~~l~-~l~~Gd----~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~ 122 (390)
T PRK08064 56 REALEDIIAELEGG------T-KGFAFASGM-AAISTAFL-LLSKGD----HVLISEDVYGGTYRMITEVLSRFGIEHTF 122 (390)
T ss_pred HHHHHHHHHHHhCC------C-CeEEECCHH-HHHHHHHH-HhCCCC----EEEEccCccchHHHHHHHHHHHcCCEEEE
Confidence 46889999999864 3 467777774 68888886 678899 9999999998533 345567998887
Q ss_pred ecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCC-CCCCCCCCCcEEEecCccc
Q 012785 218 WAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQY-TSITYPADHDLMLFTVSKS 287 (456)
Q Consensus 218 ~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~-~~~~~~~~~~i~i~S~SK~ 287 (456)
++. |.+.++. .++++|++++|+||||.+.+ ++|+++|+++|+|++|..+.. .++ ..+.+++++|+||.
T Consensus 123 v~~~d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~--~~g~Divv~S~tK~ 200 (390)
T PRK08064 123 VDMTNLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPL--DLGADVVLHSATKF 200 (390)
T ss_pred ECCCCHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCch--hhCCcEEEeeccee
Confidence 775 4555543 36799999999999999977 488999999999999985422 222 33568999999999
Q ss_pred cC-CCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 012785 288 TG-HAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRM 366 (456)
Q Consensus 288 ~g-~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 366 (456)
++ ++|+..|++++.+++++++++..+.......++.....+. + + -+.+....++..++...+.+
T Consensus 201 ~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l~~---~----g--------l~tl~~R~~~~~~~a~~la~ 265 (390)
T PRK08064 201 LAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWLVL---R----G--------LKTLHVRLEHSSETANKIAL 265 (390)
T ss_pred ccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHH---c----c--------cCcHHHHHHHHHHHHHHHHH
Confidence 85 5567788888866789999988876444444444444322 2 2 22455666777888888999
Q ss_pred HHHhcCCccccCCCCcc----cccccccCCCCCceEEeecCccHHHHHHHHHhCCE---EeecC------------CCCC
Q 012785 367 AVQKSGLFSVPELPSQF----CTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKI---LTRSG------------KHFG 427 (456)
Q Consensus 367 ~L~~~~~~~~~~~~g~~----~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI---~v~pg------------~~fg 427 (456)
.|++++.+.....++.- ..+..+.....+..+.+.+++ .+.+...+.+.++ .+.-| .++.
T Consensus 266 ~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~-~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~ 344 (390)
T PRK08064 266 YLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS-EEAVRQFVSHVKLPVFAVSLGAVESILSYPAKMSHAA 344 (390)
T ss_pred HHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC-HHHHHHHHHhCCcceEcccCCCCcceeECCccccccc
Confidence 99988644221111100 111111122233345666653 4567777777777 55555 2221
Q ss_pred ----------CCCCeEEEEecC--ChhHHHHHHHHHHhh
Q 012785 428 ----------FSPKYVRISMLD--RDENYNLFVQRLSKI 454 (456)
Q Consensus 428 ----------~~~~~iRis~~~--~~e~i~~~l~~L~~~ 454 (456)
..++.+|+|++. .++.++.+.++|+++
T Consensus 345 ~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 345 MPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred CCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 135789999975 344555555555543
No 197
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.86 E-value=3.3e-19 Score=176.75 Aligned_cols=276 Identities=14% Similarity=0.170 Sum_probs=189.0
Q ss_pred ccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhh
Q 012785 129 SYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSIT 208 (456)
Q Consensus 129 ~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~ 208 (456)
+.|+.+. ..+|++++|++.+ .+++++++|+++|+.+++. ++++|| +|+++.+.|......+
T Consensus 49 ~R~~~p~------~~~le~~lA~leg--------~~~~v~~~sG~aAi~~~l~-~l~~GD----~VI~~~~~yg~~~~~~ 109 (364)
T PRK07269 49 TRTKNPT------RAKLEETLAAIES--------ADYALATSSGMSAIVLAFS-VFPVGS----KVVAVRDLYGGSFRWF 109 (364)
T ss_pred eCCCCcc------HHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHH-HhCCCC----EEEEecCCcCchHHHH
Confidence 3456655 4899999999985 3689999999999999995 668999 9999999998766544
Q ss_pred hhc---CCeEeeeccCcccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCC-CCCCCCCC
Q 012785 209 DCV---KSRLYKWAGDAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQY-TSITYPAD 276 (456)
Q Consensus 209 ~~~---g~~~~~~~~d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~-~~~~~~~~ 276 (456)
... +...+.+..|.+.++. .++++|++++|+||||.+.+ ++|+++|+++|+|++|..+.. .++ ...
T Consensus 110 ~~~~~~~~~~~~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~~pl--~~g 187 (364)
T PRK07269 110 NQQEKEGRFHFTYANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQRPI--ELG 187 (364)
T ss_pred HHHHhcCcEEEEecCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCch--hhC
Confidence 332 1111234556666643 36899999999999998866 378899999999999875422 222 334
Q ss_pred CcEEEecCccccCCCC-ceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHH
Q 012785 277 HDLMLFTVSKSTGHAG-TRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNH 355 (456)
Q Consensus 277 ~~i~i~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~ 355 (456)
-+++++|++|.++-+| .=.||+++.++++.++++..+.......+++..+.+...|+ .+....+
T Consensus 188 aDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~---------------tL~~r~~ 252 (364)
T PRK07269 188 ADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLK---------------TLSLRME 252 (364)
T ss_pred CcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC---------------cHHHHHH
Confidence 5699999999996433 34688888668888888876654556678877777666555 3556667
Q ss_pred HHHHHHHHHHHHHHhcCCcc-cc-CCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHH----------hCCEEee
Q 012785 356 QMSTRWKQLRMAVQKSGLFS-VP-ELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLK----------GNKILTR 421 (456)
Q Consensus 356 ~~~~~~~~l~~~L~~~~~~~-~~-~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~----------~~gI~v~ 421 (456)
+.+++...+.+.|++++.+. +. ++.||+ +.+.+.+ ....+.+.++ .+.+.+.
T Consensus 253 ~~~~na~~~a~~L~~~p~v~~v~ypg~gg~--------------~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~~~ 318 (364)
T PRK07269 253 RSTANAQEVVAFLKKSPAVKEVLYTGKGGM--------------ISFKVADETRIPHILNSLKVFTFAESLGGVESLITY 318 (364)
T ss_pred HHHHHHHHHHHHHHhCCCccEEeCCCcCcE--------------EEEEECCHHHHHHHHHhCCcceEccCCCCcCeEeeC
Confidence 77888889999999887432 22 445555 3333332 1112222222 2344555
Q ss_pred cCCCC------------CCCCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 422 SGKHF------------GFSPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 422 pg~~f------------g~~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
|+..+ |..++.||+|++. |+.+.+++-|.+.|+
T Consensus 319 p~~~~~~~~~~~~r~~~Gi~~~liRlsvGl--E~~~dli~dl~~al~ 363 (364)
T PRK07269 319 PTTQTHADIPAEVRHSYGLTDDLLRLSIGI--EDARDLIADLKQALE 363 (364)
T ss_pred CcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHhc
Confidence 64432 2246789999954 356667777777653
No 198
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.85 E-value=1.5e-19 Score=183.08 Aligned_cols=259 Identities=12% Similarity=0.044 Sum_probs=176.7
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhcCC----------------eEeeeccC-----
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCVKS----------------RLYKWAGD----- 221 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~g~----------------~~~~~~~d----- 221 (456)
+.+++++++++|++.+++.... .|.. +|+...-+|++....+...+. ..++++.+
T Consensus 102 ~~~~f~~sGseA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~ 178 (421)
T PRK09792 102 AKTAFFTTGAEAVENAVKIARAHTGRP---GVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGIS 178 (421)
T ss_pred ceEEEeCChHHHHHHHHHHHHHhcCCC---eEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccccc
Confidence 5889999999999999987653 2322 899999999997654433211 11223221
Q ss_pred ----ccccc--------cCCCeEEEEcCCCCCCcccc-h--------HHhhhcCcEEEeeecCCCCCCCCCC---C--CC
Q 012785 222 ----AKRFN--------KDGPYIELVTSPNNPDGSVR-Q--------SVVNRSGGILVHDLAYYWPQYTSIT---Y--PA 275 (456)
Q Consensus 222 ----~~~l~--------~~~~~~i~v~~P~NPtG~~~-~--------~l~~~~~~~iI~De~y~~~~~~~~~---~--~~ 275 (456)
.+.++ ..+.+++++...++|+|..+ + ++|+++|+++|+||+|.+.++.+.. . ..
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~ 258 (421)
T PRK09792 179 TQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYAD 258 (421)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCC
Confidence 12221 12456777766699999876 4 2899999999999999975444321 1 11
Q ss_pred CCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHH
Q 012785 276 DHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNH 355 (456)
Q Consensus 276 ~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~ 355 (456)
..+ +.||||.++ +|+|+||++++ +++++.+.......+++.++++|.++.+.++.+.++ +++++.++
T Consensus 259 ~pD--i~t~gK~l~-~G~pigav~~~-~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~---------~~~~~~~~ 325 (421)
T PRK09792 259 KPD--LMTMAKSLA-GGMPLSGVVGN-ANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKE---------SLCERANQ 325 (421)
T ss_pred CCc--EEEeehhhc-CCCceEEEEEc-HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhh---------hHHHHHHH
Confidence 223 689999999 99999999996 889888766556678999999999988888876543 45555553
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCC-cccccccccCCCCCceEEeecCcc---------HHHHHHHHHhCCEEeecCCC
Q 012785 356 QMSTRWKQLRMAVQKSGLFSVPELPS-QFCTFLGRAFEPQPAFAWLKCEQE---------IEDCESFLKGNKILTRSGKH 425 (456)
Q Consensus 356 ~~~~~~~~l~~~L~~~~~~~~~~~~g-~~~~~~~~~~~~~~~f~~~~~~~~---------~~~~~~~l~~~gI~v~pg~~ 425 (456)
.-+..++.+.+..++++.+ ..+.| |+ ++|+.+++. ...+...+.++||.+.+.
T Consensus 326 ~g~~l~~~l~~l~~~~p~v--~~vrG~Gl-------------~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~-- 388 (421)
T PRK09792 326 LGQRLKNTLIDAKESVPAI--AAVRGLGS-------------MIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTC-- 388 (421)
T ss_pred HHHHHHHHHHHHHHhCCCc--ceecccce-------------EEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeec--
Confidence 3333333333333344532 23344 44 788888532 345677788999999642
Q ss_pred CCCCCCeEEEEecC--ChhHHHHHHHHHHhhhC
Q 012785 426 FGFSPKYVRISMLD--RDENYNLFVQRLSKILS 456 (456)
Q Consensus 426 fg~~~~~iRis~~~--~~e~i~~~l~~L~~~l~ 456 (456)
+...+.||+..+. +++++++++++|.++++
T Consensus 389 -g~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 389 -GAYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred -CCCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 2236889999653 89999999999998863
No 199
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.85 E-value=2.2e-19 Score=181.67 Aligned_cols=154 Identities=18% Similarity=0.215 Sum_probs=121.9
Q ss_pred ccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChh---
Q 012785 129 SYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYP--- 205 (456)
Q Consensus 129 ~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~--- 205 (456)
++|+.+. ..+|++.+|++++. +..++++++++++..++.+++++|| +|+++.|.|++..
T Consensus 52 sr~~~p~------~~~le~~lA~l~g~--------~~~v~~~sG~~Ai~~al~~l~~~Gd----~Vl~~~~~y~~t~~~~ 113 (418)
T TIGR01326 52 SRLMNPT------TDVLEQRIAALEGG--------VAALAVASGQAAITYAILNLAQAGD----NIVSSSYLYGGTYNLF 113 (418)
T ss_pred ECCCChh------HHHHHHHHHHHhCC--------CeEEEEccHHHHHHHHHHHHhCCCC----EEEEECCCcHHHHHHH
Confidence 3455554 47999999999862 3678888999999999999999999 9999999987643
Q ss_pred -hhhhhcCCeEeeecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCC
Q 012785 206 -SITDCVKSRLYKWAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPA 275 (456)
Q Consensus 206 -~~~~~~g~~~~~~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~ 275 (456)
..++..|++++.++. |.+.++. .++++|++++|+||||.+.+ ++|+++|+++|+|++|..+ ....+...
T Consensus 114 ~~~~~~~G~~v~~v~~~d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~-~~~~~l~~ 192 (418)
T TIGR01326 114 KHTLKRLGIEVRFVDPDDPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATP-YLCRPIDH 192 (418)
T ss_pred HHHHHHcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchh-hcCCchhc
Confidence 345668988887765 4455543 36789999999999999877 4889999999999999743 11112234
Q ss_pred CCcEEEecCccccCCCCceEEEEEEe
Q 012785 276 DHDLMLFTVSKSTGHAGTRIGWALVK 301 (456)
Q Consensus 276 ~~~i~i~S~SK~~g~~G~RiG~l~~~ 301 (456)
+.+++++|+||.++.+|+|+||++++
T Consensus 193 g~Divv~S~sK~l~g~G~~lGg~v~~ 218 (418)
T TIGR01326 193 GADIVVHSATKYIGGHGTAIGGVIVD 218 (418)
T ss_pred CCeEEEECccccccCCccceEEEEEe
Confidence 57999999999999899999999996
No 200
>PLN02624 ornithine-delta-aminotransferase
Probab=99.85 E-value=1.1e-19 Score=186.47 Aligned_cols=272 Identities=15% Similarity=0.090 Sum_probs=177.4
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCC-----CCC-CCcEEEEeCCCCCChhhhhhhcC----
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQ-----DAS-EPISVVSAAPYYSSYPSITDCVK---- 212 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~-----gd~-~~~~Vlv~~P~y~~~~~~~~~~g---- 212 (456)
.+|.+.++++.+ .+.++++++++++++.+++..... |.. ....|+...-+|++....+....
T Consensus 120 ~~la~~L~~~~~--------~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~ 191 (474)
T PLN02624 120 PEFAEYLTSMFG--------YDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNE 191 (474)
T ss_pred HHHHHHHHhhcC--------CCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCcc
Confidence 567777777642 258999999999999999865431 100 01168888888988754443321
Q ss_pred -----------CeEeeeccCcccccc------CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCC
Q 012785 213 -----------SRLYKWAGDAKRFNK------DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWP 266 (456)
Q Consensus 213 -----------~~~~~~~~d~~~l~~------~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~ 266 (456)
...+++. |.+.++. .++++|+++.++||+|.+++ ++|++||+++|.||+|.+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~-d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~ 270 (474)
T PLN02624 192 ATRGFGPLLPGHLKVDFG-DLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGL 270 (474)
T ss_pred ccccCCCCCCCceEeCCC-CHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc
Confidence 1222222 4444432 35678999999999999877 2799999999999999865
Q ss_pred CCCCC--CC-CCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCC
Q 012785 267 QYTSI--TY-PADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSG 343 (456)
Q Consensus 267 ~~~~~--~~-~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~ 343 (456)
++++- .. ..+...-+.+|||.+|.+++++|+++++ +++++.+.......+++.+++.+.++.+.|+.+.+.
T Consensus 271 GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~-~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~----- 344 (474)
T PLN02624 271 ARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLAD-KDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDE----- 344 (474)
T ss_pred CcCcchhhHHhcCCCCCEEEecccccCCCCcceeeeec-HHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhc-----
Confidence 44331 11 1111112444799999666999999996 888887765555567889999999999999865432
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHh----cC-CccccCCCCcccccccccCCCCCce-EEeecC----ccHHHHHHHH
Q 012785 344 SEDECFFEFTNHQMSTRWKQLRMAVQK----SG-LFSVPELPSQFCTFLGRAFEPQPAF-AWLKCE----QEIEDCESFL 413 (456)
Q Consensus 344 ~~~~~~l~~~~~~~~~~~~~l~~~L~~----~~-~~~~~~~~g~~~~~~~~~~~~~~~f-~~~~~~----~~~~~~~~~l 413 (456)
+ +.+...++.+.+.+.|++ ++ .+...++.|.+ + ++++.+ .....+.+.|
T Consensus 345 ----~----l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~-------------~~i~l~~~~~~~~~a~~~~~~L 403 (474)
T PLN02624 345 ----K----LAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLL-------------NAVVLNSPKLGPVSAYDVCLKL 403 (474)
T ss_pred ----h----HHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEE-------------EEEEecCCCcChHHHHHHHHHH
Confidence 1 222333333334333333 22 12223344544 2 233322 1234567778
Q ss_pred HhCCEEeecCCCCCCCCCeEEEEe--cCChhHHHHHHHHHHhhh
Q 012785 414 KGNKILTRSGKHFGFSPKYVRISM--LDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 414 ~~~gI~v~pg~~fg~~~~~iRis~--~~~~e~i~~~l~~L~~~l 455 (456)
.++||.+.|+ +.+++||+. ..+++++++++++|++++
T Consensus 404 ~e~GV~v~p~-----~~~~lR~~p~l~~t~e~id~~l~~L~~~l 442 (474)
T PLN02624 404 KERGLLAKPT-----HDTIIRLAPPLSISEDELQECSKALSDVL 442 (474)
T ss_pred HhCCeEEecC-----CCCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 8999999985 367899985 359999999999999876
No 201
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=1.5e-19 Score=183.13 Aligned_cols=257 Identities=14% Similarity=0.072 Sum_probs=176.2
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhcCCe---E-------------eeecc------
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCVKSR---L-------------YKWAG------ 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~---~-------------~~~~~------ 220 (456)
+.+++++++++|++.+++.... .|.. +|+...-+|++....+...... . ++++-
T Consensus 102 ~~~~f~~sGseA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 178 (421)
T PRK06777 102 AKTAFFTTGAEAVENAVKIARAYTGRP---GVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVS 178 (421)
T ss_pred ceEEEeCCcHHHHHHHHHHHHHhhCCC---eEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcC
Confidence 5899999999999999987643 2322 7999999999987655433111 0 01110
Q ss_pred ---Cccccc--------cCCCeEEEEcCCCCCCccc-ch--------HHhhhcCcEEEeeecCCCCCCCCCC---CCC--
Q 012785 221 ---DAKRFN--------KDGPYIELVTSPNNPDGSV-RQ--------SVVNRSGGILVHDLAYYWPQYTSIT---YPA-- 275 (456)
Q Consensus 221 ---d~~~l~--------~~~~~~i~v~~P~NPtG~~-~~--------~l~~~~~~~iI~De~y~~~~~~~~~---~~~-- 275 (456)
+.+.++ .++..++++...+++.|.. .+ ++|+++|+++|.||+|.+..+.+.. ...
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~ 258 (421)
T PRK06777 179 VEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDV 258 (421)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCC
Confidence 011121 1245677776568888864 33 3899999999999999975443321 111
Q ss_pred CCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHH
Q 012785 276 DHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNH 355 (456)
Q Consensus 276 ~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~ 355 (456)
..+ +.+|||.++ +|+|+||++++ +++++.+.......+++.++++|.++.+.|+.+.+. .+.+
T Consensus 259 ~pD--iv~~sK~l~-~G~pigav~~~-~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~-------------~l~~ 321 (421)
T PRK06777 259 KPD--LITMAKSLG-GGMPISAVVGR-AEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAEE-------------KLCQ 321 (421)
T ss_pred CCC--EEeeehhhc-CCCceEEEEEc-HHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhc-------------cHHH
Confidence 123 347999999 99999999997 899888876656678999999999999999865332 3455
Q ss_pred HHHHHHHHHHHHHHhc----CCccccCCCCcccccccccCCCCCceE-EeecCc----c---HHHHHHHHHhCCEEeecC
Q 012785 356 QMSTRWKQLRMAVQKS----GLFSVPELPSQFCTFLGRAFEPQPAFA-WLKCEQ----E---IEDCESFLKGNKILTRSG 423 (456)
Q Consensus 356 ~~~~~~~~l~~~L~~~----~~~~~~~~~g~~~~~~~~~~~~~~~f~-~~~~~~----~---~~~~~~~l~~~gI~v~pg 423 (456)
+++++.+++.+.|+++ +.+...++.|.+ |. .+..+. + ...+...+.++||.+.|+
T Consensus 322 ~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~-------------~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~ 388 (421)
T PRK06777 322 RALILGAHLVEVLEKAKASCPAIVDIRARGSM-------------VAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSC 388 (421)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEecCceEE-------------EEEEEecCccCCccHHHHHHHHHHHHhCCeEEeec
Confidence 6666666666666553 445556677776 32 232221 1 233455577899999998
Q ss_pred CCCCCCCCeEEEEec--CChhHHHHHHHHHHhhhC
Q 012785 424 KHFGFSPKYVRISML--DRDENYNLFVQRLSKILS 456 (456)
Q Consensus 424 ~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l~ 456 (456)
..|+ +++||... .+++++++++++|.+++.
T Consensus 389 ~~~g---~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 389 GVHG---NVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred CCCC---CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 7664 68999974 599999999999998763
No 202
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.85 E-value=3e-19 Score=178.73 Aligned_cols=273 Identities=16% Similarity=0.120 Sum_probs=187.7
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhc------CCCCCCCcEEEEeCCCCCChhhhhhhcCCeE
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALS------SQDASEPISVVSAAPYYSSYPSITDCVKSRL 215 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~------~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~ 215 (456)
..++++.++++++. ++.++++++|+++++..++.++. .+|| +|++++|+|..+...++..|+++
T Consensus 61 ~~~~~~~la~~~g~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~----~vl~~~~~h~~~~~~~~~~G~~~ 130 (373)
T TIGR03812 61 EEEVVGSLGNLLHL------PDAYGYIVSGGTEANIQAVRAAKNLAREEKRTP----NIIVPESAHFSFEKAAEMLGLEL 130 (373)
T ss_pred HHHHHHHHHHHhCC------CCCCeEEeccHHHHHHHHHHHHHHHHhccCCCc----EEEECCcchHHHHHHHHHcCCeE
Confidence 36777778877764 44678889999999988877664 3567 99999999999999999999998
Q ss_pred eeecc------Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCC---------CCCC
Q 012785 216 YKWAG------DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQY---------TSIT 272 (456)
Q Consensus 216 ~~~~~------d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~---------~~~~ 272 (456)
+.++. |.+.++. .++..+++.+|+||||.+.+ ++|+++++++|+|++|.+... ..+.
T Consensus 131 ~~v~~~~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d 210 (373)
T TIGR03812 131 RYAPLDEDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFD 210 (373)
T ss_pred EEEeeCCCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcc
Confidence 87764 3334432 23444444458999999876 378899999999999974210 0111
Q ss_pred -CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccC--------cCChHHHHHHHHHHHhhhCCCCCCC
Q 012785 273 -YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTI--------GVSKDSQLRAAKVLKVVSDSCKPSG 343 (456)
Q Consensus 273 -~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~--------~~s~~~q~~a~~~L~~~~~~~~~~~ 343 (456)
....-..+..|..| +++++.|.|+++..++++++.+......... ..+.....++...|+.+.
T Consensus 211 ~~~~~~d~~~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~------- 282 (373)
T TIGR03812 211 FSLPGVQSITIDPHK-MGLSPIPAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLG------- 282 (373)
T ss_pred ccCCCCCEEEECccc-cCCCcCCceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhC-------
Confidence 01122445667789 6678889997775457777766422111111 122344555556565321
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecC
Q 012785 344 SEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSG 423 (456)
Q Consensus 344 ~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg 423 (456)
++.+++..+++.++++.+.+.|++++...+.. +..+++.+++++ .+.+.+.|.++||.++++
T Consensus 283 ---~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--------------~~~~~v~~~~~~-~~~v~~~L~~~gi~v~~~ 344 (373)
T TIGR03812 283 ---REGYRKIVAECMENTRYLVEELKKIGFEPVIE--------------PVLNIVAFEVDD-PEEVRKKLRDRGWYVSVT 344 (373)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcC--------------CCceEEEEEeCC-HHHHHHHHHHCCceeccC
Confidence 34567788899999999999999876322222 223466677653 456888888999999874
Q ss_pred CCCCCCCCeEEEEecC--ChhHHHHHHHHHHhh
Q 012785 424 KHFGFSPKYVRISMLD--RDENYNLFVQRLSKI 454 (456)
Q Consensus 424 ~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~ 454 (456)
. .++++|+++.. ++++++.+++.|+++
T Consensus 345 ~----~~~~iRis~~~~~t~edid~l~~~L~~~ 373 (373)
T TIGR03812 345 R----CPKALRIVVMPHVTREHIEEFLEDLKEI 373 (373)
T ss_pred C----CCCEEEEEEECCCCHHHHHHHHHHHhhC
Confidence 2 36799999873 899999999999864
No 203
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.85 E-value=4.6e-20 Score=182.63 Aligned_cols=268 Identities=12% Similarity=0.093 Sum_probs=189.5
Q ss_pred cccCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccCHHHHHHHHHHHhcC------------CCCCCCcEEEE
Q 012785 130 YFSDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTGSTQLFQAALYALSS------------QDASEPISVVS 196 (456)
Q Consensus 130 ~y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G~~~al~~~~~~l~~------------~gd~~~~~Vlv 196 (456)
.|....+ ..++++++++++.. .|.+. ++.++++|+|+++++..++.++.. +++ ...|++
T Consensus 29 ~y~~~~~-----~~~le~~~~~~~~~~~g~~~-~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~--~~~v~~ 100 (345)
T cd06450 29 TWDESPA-----ATEMEAEVVNWLAKLFGLPS-EDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGID--KLVIVC 100 (345)
T ss_pred ccccCch-----hHHHHHHHHHHHHHHhCCCC-CCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccC--CeEEEE
Confidence 3666666 48999999999854 46552 245799999999999999988753 221 117888
Q ss_pred eCCCCCChhhhhhhcCCeEeeeccCc------ccccc---C------CCeEEEEcCCCCCCcccch-----HHhhhcCcE
Q 012785 197 AAPYYSSYPSITDCVKSRLYKWAGDA------KRFNK---D------GPYIELVTSPNNPDGSVRQ-----SVVNRSGGI 256 (456)
Q Consensus 197 ~~P~y~~~~~~~~~~g~~~~~~~~d~------~~l~~---~------~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~ 256 (456)
++++|..+...++..|.+++.++.|. +.++. . +++++++++|+||||.+.+ ++|+++|++
T Consensus 101 ~~~~h~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~ 180 (345)
T cd06450 101 SDQAHVSVEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLW 180 (345)
T ss_pred cCcchhHHHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCe
Confidence 89999999888888899888776543 33322 2 5678888999999999866 388999999
Q ss_pred EEeeecCCCCCCC-----CCCCC-CCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHH
Q 012785 257 LVHDLAYYWPQYT-----SITYP-ADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAK 330 (456)
Q Consensus 257 iI~De~y~~~~~~-----~~~~~-~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~ 330 (456)
+++|++|.+.... ..... .+-+.+..|++|.++ ++.++|+++++ .+.+.++..
T Consensus 181 l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~--------------------~~~~~~~l~ 239 (345)
T cd06450 181 LHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGL-VPLGCSAVLVR--------------------ALKLWATLR 239 (345)
T ss_pred EEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhC-CCcchHHHHHH--------------------HHHHHHHHH
Confidence 9999999853221 10011 233567789999776 66788887653 444555555
Q ss_pred HHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCcccccccccCCCCCceEEeecCc-----
Q 012785 331 VLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPE-LPSQFCTFLGRAFEPQPAFAWLKCEQ----- 404 (456)
Q Consensus 331 ~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~g~~~~~~~~~~~~~~~f~~~~~~~----- 404 (456)
.+. ...+++.+++..+.++.+.+.|++++.+.+.. +.++ ++.+.++.
T Consensus 240 ~l~-------------~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~--------------iv~f~~~~~~~~~ 292 (345)
T cd06450 240 RFG-------------RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLS--------------LVCFRLKPSVKLD 292 (345)
T ss_pred HHh-------------HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcee--------------EEEEEECCcchhh
Confidence 554 34566778888889999999998876554432 2222 34444443
Q ss_pred -cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC---ChhHHHHHHHHHHhh
Q 012785 405 -EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD---RDENYNLFVQRLSKI 454 (456)
Q Consensus 405 -~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~---~~e~i~~~l~~L~~~ 454 (456)
+...+.+.|.++|+.+.++..|. .++++|+++.. ++++++++++.|++.
T Consensus 293 ~~~~~i~~~L~~~g~~~~~~~~~~-~~~~lRis~~~~~~t~~di~~l~~~l~~~ 345 (345)
T cd06450 293 ELNYDLSDRLNERGGWHVPATTLG-GPNVLRFVVTNPLTTRDDADALLEDIERA 345 (345)
T ss_pred HHHHHHHHHHHhcCCEEEEeeEEC-CeEEEEEEecCCCCCHHHHHHHHHHHHhC
Confidence 34567888888877666665554 46799999873 779999999999763
No 204
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.84 E-value=4.6e-19 Score=178.15 Aligned_cols=272 Identities=13% Similarity=0.042 Sum_probs=186.6
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc-
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG- 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~- 220 (456)
..++++.+|++++. +++++++|+++++.+++.++..+|| +|+++.++|......++..|++++.++.
T Consensus 65 ~~~l~~~lA~~~g~--------~~~~~~~g~t~a~~~al~~l~~~gd----~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~ 132 (387)
T PRK09331 65 IADFHEDLAEFLGM--------DEARVTHGAREGKFAVMHSLCKKGD----YVVLDGLAHYTSYVAAERAGLNVREVPKT 132 (387)
T ss_pred HHHHHHHHHHHhCC--------CcEEEeCCHHHHHHHHHHHhcCCCC----EEEECCCchHHHHHHHHHcCCEEEEEeCc
Confidence 48999999999964 3678899999999999999999999 9999999988877778889999887765
Q ss_pred -C------cccccc----------CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCC
Q 012785 221 -D------AKRFNK----------DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADH 277 (456)
Q Consensus 221 -d------~~~l~~----------~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~ 277 (456)
| .+.++. .++++|++++|+||||...+ ++|+++|+++|+|++|..... ++. ...+.
T Consensus 133 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~-~~~~~~~g~ 211 (387)
T PRK09331 133 GYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRM-PVDGKKLGA 211 (387)
T ss_pred cCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCc-CCCHHHcCC
Confidence 2 333321 15789999999999999876 489999999999999984321 221 23356
Q ss_pred cEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhc------cCc--CChHHHHHHHHHHHhhhCCCCCCCCcchhH
Q 012785 278 DLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELN------TIG--VSKDSQLRAAKVLKVVSDSCKPSGSEDECF 349 (456)
Q Consensus 278 ~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~------~~~--~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~ 349 (456)
+++++|++|.++ .+.|+||++++ +++++.+.+..... .++ .+.....++.+.++.+ .+.
T Consensus 212 D~~~~s~~K~l~-~~~~~G~l~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~-----------~~~ 278 (387)
T PRK09331 212 DFIVGSGHKSMA-ASAPSGVLATT-EEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHV-----------VER 278 (387)
T ss_pred CEEEeeCccccc-CCCCEEEEEEC-HHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHH-----------HHH
Confidence 899999999998 56699999996 88887765542100 011 1111222223333311 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc----------cHHHHHHHHHhCCEE
Q 012785 350 FEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----------EIEDCESFLKGNKIL 419 (456)
Q Consensus 350 l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----------~~~~~~~~l~~~gI~ 419 (456)
++ ..++..++.+.+++.|++++++.+.... ++.+++..++.+. ....+.+.|+++||.
T Consensus 279 ~~-~~~~~~~~~~~l~~~L~~l~g~~~~~~~-----------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~ 346 (387)
T PRK09331 279 VK-RWDEEVKKARWFVDELEKIEGFKQLGEK-----------PRNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIH 346 (387)
T ss_pred HH-HHHHHHHHHHHHHHHHhcCCCEEEeccC-----------cCcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCce
Confidence 33 2344456677888999988555544211 1122344344331 224577888899998
Q ss_pred eecCCCCCCCCCeEEEEecC-ChhHHHHHHHHHHhhh
Q 012785 420 TRSGKHFGFSPKYVRISMLD-RDENYNLFVQRLSKIL 455 (456)
Q Consensus 420 v~pg~~fg~~~~~iRis~~~-~~e~i~~~l~~L~~~l 455 (456)
+.+. .....+|+.... ++++++.+++.|++++
T Consensus 347 ~~~~----~~~~i~ri~~~g~t~~di~~l~~aL~~i~ 379 (387)
T PRK09331 347 GIKP----GATKEFKLSTYGLTWEQVEYVADAFKEIA 379 (387)
T ss_pred EEcc----CCceEEEEEeccCCHHHHHHHHHHHHHHH
Confidence 4331 125567777645 8999999999999875
No 205
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=8.3e-19 Score=174.97 Aligned_cols=283 Identities=13% Similarity=0.131 Sum_probs=183.6
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhh----hhhhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPS----ITDCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~----~~~~~g~~~~~ 217 (456)
..+|++.+|++.+. +..+++++|. .++.+++ .++++|| +|++++|+|+.... .+...|+++..
T Consensus 52 ~~~Le~~lA~l~g~-------~~~~~~~sG~-aai~~~~-~~l~~Gd----~Viv~~~~y~~~~~~~~~~~~~~G~~v~~ 118 (377)
T PRK07671 52 RAALEELIAVLEGG-------HAGFAFGSGM-AAITAVM-MLFSSGD----HVILTDDVYGGTYRVMTKVLNRFGIEHTF 118 (377)
T ss_pred HHHHHHHHHHHhCC-------CceEEeCCHH-HHHHHHH-HHhCCCC----EEEECCCccchHHHHHHHHHhcCCeEEEE
Confidence 47899999999863 3467777775 6777765 5778999 99999999985433 33446888887
Q ss_pred ecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCcccc
Q 012785 218 WAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKST 288 (456)
Q Consensus 218 ~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~ 288 (456)
++. |.+.++. .++++|++++|+||||.+.+ ++|+++|+++|+|++|..+.+. .+...+.+++++|+||.+
T Consensus 119 v~~~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~-~p~~~g~Divv~S~sK~l 197 (377)
T PRK07671 119 VDTSNLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQ-SPISLGADIVLHSATKYL 197 (377)
T ss_pred ECCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccC-ChhhhCCeEEEecCcccc
Confidence 765 5555543 36799999999999999876 4889999999999999753221 112234579999999999
Q ss_pred CCC-CceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 012785 289 GHA-GTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMA 367 (456)
Q Consensus 289 g~~-G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 367 (456)
+-+ +.-.|++++.+++++++++..+.......++...+.+..-+ +.+....++..++...+.+.
T Consensus 198 ~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l---------------~tl~~R~~~~~~na~~la~~ 262 (377)
T PRK07671 198 GGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGL---------------KTLGIRMEEHETNSRAIAEF 262 (377)
T ss_pred cCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCc---------------ChHHHHHHHHHHHHHHHHHH
Confidence 744 34567788766889999988876555556665555444333 34556777788899999999
Q ss_pred HHhcCCccccCCCCcc----cccccccCCCCCceEEeecCccHHHHHHHHHhCCEEe---ecCCC---------------
Q 012785 368 VQKSGLFSVPELPSQF----CTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILT---RSGKH--------------- 425 (456)
Q Consensus 368 L~~~~~~~~~~~~g~~----~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v---~pg~~--------------- 425 (456)
|++++.+.....++.- .....+.....+..+-+++. +.+.+.+.+..-.+.. .-|..
T Consensus 263 L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~-~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~ 341 (377)
T PRK07671 263 LNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVG-SEETANKVLERLQYFTLAESLGAVESLISIPSQMTHASI 341 (377)
T ss_pred HHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeC-CHHHHHHHHHhCCcceEccCCCCCCeEeECCCccccccC
Confidence 9988654332222110 01111111222334555663 4444444444433321 11110
Q ss_pred -------CCCCCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 426 -------FGFSPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 426 -------fg~~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
.|..++.||||++. |+.+.+++-|.+.|+
T Consensus 342 ~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al~ 377 (377)
T PRK07671 342 PADRRKELGITDGLIRISVGI--EDGEDLIEDLAQALA 377 (377)
T ss_pred CHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHhC
Confidence 11235789999854 345667777777653
No 206
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.84 E-value=1e-18 Score=176.24 Aligned_cols=283 Identities=13% Similarity=0.043 Sum_probs=199.9
Q ss_pred HHHHHHHHHHHH-HhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCCh--hhhhhhcCCeEeeec
Q 012785 143 PEFAKEVVRLHK-VVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSY--PSITDCVKSRLYKWA 219 (456)
Q Consensus 143 ~~lr~aia~~~~-~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~--~~~~~~~g~~~~~~~ 219 (456)
.++.+.+++.+. .+|.. .++.+++++|++++++.++..+.++|| +|++.+|.|+.. ...++..|++++.++
T Consensus 41 ~~~~~~~~~~l~~~~g~~--~~~~vi~~~~gt~a~~~a~~~~~~~Gd----~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~ 114 (401)
T PLN02409 41 PALTKELLEDVKYIFKTK--SGTPFIFPTTGTGAWESALTNTLSPGD----KVVSFRIGQFSLLWIDQMQRLNFDVDVVE 114 (401)
T ss_pred HHHHHHHHHHHHHHhCCC--CCCEEEEeCCcHHHHHHHHHhcCCCCC----EEEEeCCCchhHHHHHHHHHcCCceEEEE
Confidence 566666666663 33433 234788999999999999999999999 999999988765 466778899888766
Q ss_pred cC------ccccc----c---CCCeEEEEcCCCCCCcccch-----HH--hhhcCcEEEeeecCCCCCCCCCC-CCCCCc
Q 012785 220 GD------AKRFN----K---DGPYIELVTSPNNPDGSVRQ-----SV--VNRSGGILVHDLAYYWPQYTSIT-YPADHD 278 (456)
Q Consensus 220 ~d------~~~l~----~---~~~~~i~v~~P~NPtG~~~~-----~l--~~~~~~~iI~De~y~~~~~~~~~-~~~~~~ 278 (456)
.+ .+.++ . .+++++++++++||||.+++ ++ |+++|+++|+|+++.-. ..++. ...+.+
T Consensus 115 ~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g-~~~id~~~~~~D 193 (401)
T PLN02409 115 SPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIG-ALDFRMDEWGVD 193 (401)
T ss_pred CCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccC-CccccccccCcc
Confidence 54 23332 1 25789999999999999987 37 88899999999998732 22332 233557
Q ss_pred EEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHh---------------h---ccCcCChHHHHHHHHHHHhhhCCCC
Q 012785 279 LMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIE---------------L---NTIGVSKDSQLRAAKVLKVVSDSCK 340 (456)
Q Consensus 279 i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~---------------~---~~~~~s~~~q~~a~~~L~~~~~~~~ 340 (456)
+++.|.+|.++.|. ++||++++ +++.+++..... . ...+++...+.++.++++.+.
T Consensus 194 ~~~~s~~K~l~~P~-G~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~---- 267 (401)
T PLN02409 194 VALTGSQKALSLPT-GLGIVCAS-PKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIF---- 267 (401)
T ss_pred EEEEcCccccCcCC-CcceeEEC-HHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHH----
Confidence 88899999986443 69999997 888887754210 0 023455666777777777432
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHH-HHHHhCC
Q 012785 341 PSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCE-SFLKGNK 417 (456)
Q Consensus 341 ~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~-~~l~~~g 417 (456)
+.-++++++++++.++.+.+.|++.+ +++..+.... ..+...++.++. +.+.+. .++.++|
T Consensus 268 ------~~G~e~i~~~~~~l~~~l~~~L~~~g-~~~~~~~~~~---------~s~~v~~~~~p~~~~~~~l~~~l~~~~~ 331 (401)
T PLN02409 268 ------EEGLENVIARHARLGEATRLAVEAWG-LKLCTKKPEW---------RSDTVTAVVVPEGIDSAEIVKNAWKKYN 331 (401)
T ss_pred ------HhhHHHHHHHHHHHHHHHHHHHHHcC-CeeccCChhh---------cccceEEEeCCCCCCHHHHHHHHHHhCC
Confidence 23467888899999999999998774 4444332111 111235666653 444554 4557889
Q ss_pred EEeecCCCCCCCCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 418 ILTRSGKHFGFSPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 418 I~v~pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
|.+.+|..- .....|||+.-. +.+++..+++.|.++|
T Consensus 332 i~i~~G~~~-~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l 370 (401)
T PLN02409 332 LSLGLGLNK-VAGKVFRIGHLGNVNELQLLGALAGVEMVL 370 (401)
T ss_pred EEEEcCCCc-ccCCEEEEcCCCCCCHHHHHHHHHHHHHHH
Confidence 999998642 246899999654 8899999999998865
No 207
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=1.3e-18 Score=173.70 Aligned_cols=281 Identities=15% Similarity=0.179 Sum_probs=210.0
Q ss_pred CHHHHHHHHHHHHHhcCccCC-CceEEEccCHHHHHHHHHHHh---cCCCCCCCcEEEEeCCCCCC----hhhhhhhcCC
Q 012785 142 EPEFAKEVVRLHKVVGNAITE-NHHIVVGTGSTQLFQAALYAL---SSQDASEPISVVSAAPYYSS----YPSITDCVKS 213 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~-~~~I~~t~G~~~al~~~~~~l---~~~gd~~~~~Vlv~~P~y~~----~~~~~~~~g~ 213 (456)
+++.|+++|++++. + .++|++|.|+|++|+++..++ ..+|| +|++.+-.|+. +....+..|+
T Consensus 68 ~e~aRe~va~~~~a------~~~~eIvft~~tT~aln~va~~l~~~~~~gd----eIv~s~~EH~sn~~pw~~~~~~~Ga 137 (405)
T COG0520 68 YEAAREAVARFLNA------DSSDEIVFTRGTTEALNLVARGLGRSLKPGD----EIVVSDLEHHSNIVPWQELAKRTGA 137 (405)
T ss_pred HHHHHHHHHHHhCC------CCCCeEEEeCChhHHHHHHHHHhhhhhcCCC----EEEEccCcchhhHHHHHHHHHhcCc
Confidence 47888999999875 4 478999999999999999999 58899 99999988775 3445555688
Q ss_pred eEeeeccCccc------cc---cCCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcE
Q 012785 214 RLYKWAGDAKR------FN---KDGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDL 279 (456)
Q Consensus 214 ~~~~~~~d~~~------l~---~~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i 279 (456)
++..+++|.++ ++ ..+++++.++.-+|.||.+.+ ++|+++|+++++|-+++-++..--....+.++
T Consensus 138 ~v~~i~~~~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~Df 217 (405)
T COG0520 138 KVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCDF 217 (405)
T ss_pred EEEEEecCCCCCcCHHHHHHhcCCCceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhcCCCE
Confidence 88888876332 22 247899999999999999988 48999999999999988665444335668899
Q ss_pred EEecCcc-ccCCCCceEEEEEEeCHHHHHHHHHHHh---------------------hccCcCChHHHH-HHHHHHHhhh
Q 012785 280 MLFTVSK-STGHAGTRIGWALVKDMEVAKKMTKYIE---------------------LNTIGVSKDSQL-RAAKVLKVVS 336 (456)
Q Consensus 280 ~i~S~SK-~~g~~G~RiG~l~~~~~~~~~~l~~~~~---------------------~~~~~~s~~~q~-~a~~~L~~~~ 336 (456)
+.+|-.| .+|..| +|.+.++ +++.+.+..... ....|++.+.+. ++.++++.+.
T Consensus 218 ~afsgHKwl~gP~G--iGvLy~r-~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~ 294 (405)
T COG0520 218 LAFSGHKWLLGPTG--IGVLYVR-KELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLL 294 (405)
T ss_pred EEEcccccccCCCc--eEEEEEc-hHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHH
Confidence 9999999 777447 8999997 888887732110 012334444443 3345555432
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHh
Q 012785 337 DSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKG 415 (456)
Q Consensus 337 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~ 415 (456)
. --++.+.++.++..+++.+.|++++.+.+..++.. .....+-+.++. +..++...|.+
T Consensus 295 ~----------ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~----------~r~~~vsF~v~~~~~~dv~~~L~~ 354 (405)
T COG0520 295 E----------IGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDA----------DRGGIVSFNVKGIHPHDVATLLDE 354 (405)
T ss_pred H----------HhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcc----------cCceEEEEEeCCCCHHHHHHHHHh
Confidence 2 23567888888888999999999987777765420 011134455544 68899999999
Q ss_pred CCEEeecCCCCCC-------CCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 416 NKILTRSGKHFGF-------SPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 416 ~gI~v~pg~~fg~-------~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
+||.++.|.++.. -...+|+|+.. ++||++++++.|+++.
T Consensus 355 ~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~ 403 (405)
T COG0520 355 KGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKAL 403 (405)
T ss_pred CCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence 9999999988742 24459999874 9999999999999875
No 208
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=1.6e-18 Score=172.60 Aligned_cols=203 Identities=11% Similarity=0.094 Sum_probs=159.2
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhh----hhcCCeEeee
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSIT----DCVKSRLYKW 218 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~----~~~g~~~~~~ 218 (456)
.+|+++||++.+ .+++++++|+++|+..++.+++++|| +|++++|.|.++...+ ...|+++..+
T Consensus 64 ~~Le~~iA~le~--------~~~~~~~~sG~~Ai~~~l~all~~GD----~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v 131 (394)
T PRK09028 64 FAFQAAIVELEG--------GAGTALYPSGAAAISNALLSFLKAGD----HLLMVDSCYEPTRDLCDKILKGFGIETTYY 131 (394)
T ss_pred HHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCC----EEEEECCCcHHHHHHHHHhhhhcceEEEEE
Confidence 699999999864 24789999999999999999999999 9999999998877543 4568877766
Q ss_pred cc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC-CCCCCCCCCCcEEEecCcccc
Q 012785 219 AG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ-YTSITYPADHDLMLFTVSKST 288 (456)
Q Consensus 219 ~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~-~~~~~~~~~~~i~i~S~SK~~ 288 (456)
+. |.+.++. .++++|++++|+||||.+.+ ++|+++|+++|+|++|..+- ..|+ ..+-+++++|.+|.+
T Consensus 132 ~~~~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl--~~GaDivv~S~tK~l 209 (394)
T PRK09028 132 DPMIGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPF--EMGVDISIQAATKYI 209 (394)
T ss_pred CCCCHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccccCCcc--ccCceEEEEeCCeEe
Confidence 54 3344433 46899999999999999876 47889999999999998532 2222 445689999999999
Q ss_pred -CCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 012785 289 -GHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMA 367 (456)
Q Consensus 289 -g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 367 (456)
|+.++..|+++. ++++.++++..+.......++.....+...|+ .+.-..++..++...+.+.
T Consensus 210 ~Gh~d~~~G~~~~-~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~---------------TL~lR~~~~~~na~~la~~ 273 (394)
T PRK09028 210 VGHSDVMLGTATA-NEKHWDQLREHSYLMGQCTSPDDVYLAMRGLR---------------TLGVRLAQHEKNALKVANW 273 (394)
T ss_pred cCCCCEEEEEEEC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHcccC---------------cHHHHHHHHHHHHHHHHHH
Confidence 677788898776 48888878776665677788887777666555 3555667778888899999
Q ss_pred HHhcCCcc
Q 012785 368 VQKSGLFS 375 (456)
Q Consensus 368 L~~~~~~~ 375 (456)
|++++.+.
T Consensus 274 L~~~p~v~ 281 (394)
T PRK09028 274 LATRPEVD 281 (394)
T ss_pred HhcCCCcc
Confidence 99987543
No 209
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.84 E-value=3.3e-19 Score=181.16 Aligned_cols=257 Identities=12% Similarity=0.091 Sum_probs=169.8
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhc-CC--------------eEeeecc-------
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCV-KS--------------RLYKWAG------- 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~-g~--------------~~~~~~~------- 220 (456)
+.++++++++||++.+++.... .|.. +|+.-.-+|++....+... |. ..++++.
T Consensus 102 ~~v~f~~sGsEAve~AlklAr~~tgr~---~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (443)
T PRK08360 102 PKVSFGLSGSDANDGAIKFARAYTKRR---KILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFG 178 (443)
T ss_pred CEEEEcCCHHHHHHHHHHHHHHhcCCC---eEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCcccccccc
Confidence 5899999999999999987643 2321 7888888898875433221 11 1111110
Q ss_pred ---------Ccc----ccc----cCCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCC--C
Q 012785 221 ---------DAK----RFN----KDGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSI--T 272 (456)
Q Consensus 221 ---------d~~----~l~----~~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~--~ 272 (456)
+.+ .++ ..+++++++..-+||+|.+++ ++|+++|+++|+||+|.+..+.+- .
T Consensus 179 ~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a 258 (443)
T PRK08360 179 KEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFA 258 (443)
T ss_pred CchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchh
Confidence 011 111 135677777645799999877 279999999999999986543331 1
Q ss_pred ---CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhH
Q 012785 273 ---YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECF 349 (456)
Q Consensus 273 ---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~ 349 (456)
.....++ .+|||.++ +|+|+||++++ +++++.+.......+++.+++.|.++.+.|+.+.+. +.
T Consensus 259 ~~~~~~~pDi--itlsK~l~-~G~pigav~~~-~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~---------~l 325 (443)
T PRK08360 259 IEHFGVEPDI--ITLGKPLG-GGLPISATIGR-AEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEK---------NL 325 (443)
T ss_pred hhhcCCCCCE--EEeccccc-CCceeEEEEEc-HHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHc---------CH
Confidence 1112233 37899999 99999999997 899988876555678899999999999999876543 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc----------cHHHHHHHHHhCCEE
Q 012785 350 FEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----------EIEDCESFLKGNKIL 419 (456)
Q Consensus 350 l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----------~~~~~~~~l~~~gI~ 419 (456)
+++.++.-+..++.|.+...+.+.+...++.|.+ +-+.+.. ....+...+.++||.
T Consensus 326 ~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~--------------~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~ 391 (443)
T PRK08360 326 LKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLM--------------IGVDLVKDRETKERAYEEAAKVVWRAWELGLI 391 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceE--------------EEEEEecCCcccCccHHHHHHHHHHHHHCCeE
Confidence 4444444444444444433344434344445544 3333311 134567778899999
Q ss_pred eecCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhh
Q 012785 420 TRSGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 420 v~pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l 455 (456)
+.+. ..+.+|++ +..+++++++++++|.+.+
T Consensus 392 ~~~~-----~~~~lr~~P~l~~t~~~id~~~~~l~~~l 424 (443)
T PRK08360 392 VTFF-----SGNVLRIQPPLTIEKEVLDEGLDILEEAI 424 (443)
T ss_pred Eeec-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 8752 25789995 4459999999999998876
No 210
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.84 E-value=4.9e-19 Score=176.01 Aligned_cols=283 Identities=14% Similarity=0.131 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHHH-hcCccCCCceEEEccCHHHHHHHHHHHhcCCCCC-----------CCcEEEEeCCCCCCh----hh
Q 012785 143 PEFAKEVVRLHKV-VGNAITENHHIVVGTGSTQLFQAALYALSSQDAS-----------EPISVVSAAPYYSSY----PS 206 (456)
Q Consensus 143 ~~lr~aia~~~~~-~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~-----------~~~~Vlv~~P~y~~~----~~ 206 (456)
+++++++.+++.. +| .+++++|+|+++++.+++.+++++||. ...+|+++.|.|..| ..
T Consensus 44 ~~~~~~~~~~~a~~~g-----~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~ 118 (363)
T TIGR01437 44 KELVNKTGEYIANLLG-----VEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVET 118 (363)
T ss_pred HHHHHHHHHHHHHhhC-----CCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHH
Confidence 5666666666532 22 247899999999999999999988860 112788899888766 46
Q ss_pred hhhhcCCeEeeec----cCcccccc---CCCeEEE-EcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCC
Q 012785 207 ITDCVKSRLYKWA----GDAKRFNK---DGPYIEL-VTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITY 273 (456)
Q Consensus 207 ~~~~~g~~~~~~~----~d~~~l~~---~~~~~i~-v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~ 273 (456)
.....|++++.++ +|.+.++. .++++++ +++|+||+|.+.+ ++|+++|+++|+|++|...- ... .
T Consensus 119 ~~~~~g~~~v~v~~~~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~-~~~-~ 196 (363)
T TIGR01437 119 MVRLGGGKVVEAGYANECSAEQLEAAITEKTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL-QKY-Y 196 (363)
T ss_pred HHHhcCCeEEEEcCCCCCCHHHHHHhcChhceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch-HHH-H
Confidence 6677898888655 45555543 3567655 6789999998866 48999999999999997321 110 1
Q ss_pred CCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhc--cCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHH
Q 012785 274 PADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELN--TIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFE 351 (456)
Q Consensus 274 ~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~--~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~ 351 (456)
..+-+++++|++|.+ +|.|.|+++.+ +++++.++...... .+........+..+.++.+.+.. .+
T Consensus 197 ~~g~D~~~~S~~K~l--~gp~~G~l~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~-------~~--- 263 (363)
T TIGR01437 197 RLGADLVIYSGAKAI--EGPTSGLVLGK-KKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTG-------KE--- 263 (363)
T ss_pred HcCCCEEEEeCCccc--CCCceEEEEEc-HHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccC-------cc---
Confidence 124579999999965 67789999985 77877765432210 01111112223333343222210 12
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeec---CccHHHHHHHHHhCC--EEeecCCCC
Q 012785 352 FTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKC---EQEIEDCESFLKGNK--ILTRSGKHF 426 (456)
Q Consensus 352 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~---~~~~~~~~~~l~~~g--I~v~pg~~f 426 (456)
..+.+.++++.+.+.|++++++.+..+.+.... .++. .-+.++. .-+..++.+.|+++| |.+++ +
T Consensus 264 -~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~----~~~~--~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~---~ 333 (363)
T TIGR01437 264 -SGAEMVAKLTPFIEALNTLKGVSASIVQDEAGR----DIAR--AEIRFDESELGMTAADVVQALRQGEPAIYTRG---Y 333 (363)
T ss_pred -cHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCC----cCce--EEEEEeccCCCCCHHHHHHHHhcCCCCEEEee---e
Confidence 233344566778999998876665532211000 0000 0122332 225778889998777 77765 3
Q ss_pred CCCCCeEEEEecC-ChhHHHHHHHHHHhhh
Q 012785 427 GFSPKYVRISMLD-RDENYNLFVQRLSKIL 455 (456)
Q Consensus 427 g~~~~~iRis~~~-~~e~i~~~l~~L~~~l 455 (456)
....+.+|+++.. +++|++.++++|++++
T Consensus 334 ~~~~~~~~l~~~~~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 334 KANEGIIEIDPRSVTGGQLDIIVERIREIV 363 (363)
T ss_pred eecCCeEEEEeecCCHHHHHHHHHHHHHhC
Confidence 3357889999866 8999999999999874
No 211
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.84 E-value=2.7e-18 Score=174.45 Aligned_cols=262 Identities=18% Similarity=0.170 Sum_probs=173.2
Q ss_pred CceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhh-----hhhcCCeEeeecc-------Ccccccc---
Q 012785 163 NHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSI-----TDCVKSRLYKWAG-------DAKRFNK--- 227 (456)
Q Consensus 163 ~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~-----~~~~g~~~~~~~~-------d~~~l~~--- 227 (456)
..+|++++| ++++..++.+++++|| +|+++.|+|+.+... +...|.+++.++. |.+.++.
T Consensus 88 ~~~i~~~sg-t~al~~~l~~l~~~gd----~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~ 162 (416)
T PRK00011 88 YANVQPHSG-SQANAAVYFALLKPGD----TILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLAL 162 (416)
T ss_pred ceeeecCCc-hHHHHHHHHHhcCCCC----EEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHH
Confidence 345766666 5799999999999999 999999999865321 2233556655444 3444432
Q ss_pred -CCCeEEEEcCCCCCCcccch---HHhhhcCcEEEeeecCCCC-CC---CCCCCCCCCcEEEecCccccCCCCceEEEEE
Q 012785 228 -DGPYIELVTSPNNPDGSVRQ---SVVNRSGGILVHDLAYYWP-QY---TSITYPADHDLMLFTVSKSTGHAGTRIGWAL 299 (456)
Q Consensus 228 -~~~~~i~v~~P~NPtG~~~~---~l~~~~~~~iI~De~y~~~-~~---~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~ 299 (456)
.+++++++++++||+..-+. ++|+++|+++|+|++|... .. .+.... ..+++++|+||.+ +|.|.||++
T Consensus 163 ~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~~~S~~K~l--~g~~gg~i~ 239 (416)
T PRK00011 163 EHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVVTTTTHKTL--RGPRGGLIL 239 (416)
T ss_pred hcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEEEecCCcCC--CCCCceEEE
Confidence 36788888777777544444 3789999999999998531 11 111111 4468899999965 789999999
Q ss_pred EeCHHHHHHHHHHHhhccCcCChHHHHHH-HHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccC
Q 012785 300 VKDMEVAKKMTKYIELNTIGVSKDSQLRA-AKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPE 378 (456)
Q Consensus 300 ~~~~~~~~~l~~~~~~~~~~~s~~~q~~a-~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 378 (456)
++++++.++++........+.+...+.++ ...+... .++.++..+++++++++.+.+.|++.+ +.+..
T Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~----------~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~ 308 (416)
T PRK00011 240 TNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEA----------LEPEFKEYAQQVVKNAKALAEALAERG-FRVVS 308 (416)
T ss_pred eCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHH----------HhhhHHHHHHHHHHHHHHHHHHHHhCC-Ceeee
Confidence 97678998887765433333332222222 2222211 123467788889999999999998864 44321
Q ss_pred CCCcccccccccCCCCCceEEeecCc---cHHHHHHHHHhCCEEeecCC-CCC----CCCCeEEEEe------cCChhHH
Q 012785 379 LPSQFCTFLGRAFEPQPAFAWLKCEQ---EIEDCESFLKGNKILTRSGK-HFG----FSPKYVRISM------LDRDENY 444 (456)
Q Consensus 379 ~~g~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~~l~~~gI~v~pg~-~fg----~~~~~iRis~------~~~~e~i 444 (456)
.+ +.++++|+.+++ +.+.+.+.|+++||.+..+. .|. ..+..+|++. ..+++++
T Consensus 309 -~~-----------~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di 376 (416)
T PRK00011 309 -GG-----------TDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEM 376 (416)
T ss_pred -cC-----------CCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHH
Confidence 11 122478998853 45678888999999998432 121 1245799964 1268999
Q ss_pred HHHHHHHHhhh
Q 012785 445 NLFVQRLSKIL 455 (456)
Q Consensus 445 ~~~l~~L~~~l 455 (456)
+.+++.|++++
T Consensus 377 ~~l~~~l~~~~ 387 (416)
T PRK00011 377 KEIAELIADVL 387 (416)
T ss_pred HHHHHHHHHHH
Confidence 99999999875
No 212
>PRK05968 hypothetical protein; Provisional
Probab=99.83 E-value=1.5e-18 Score=174.05 Aligned_cols=267 Identities=13% Similarity=0.102 Sum_probs=178.5
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChh----hhhhhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYP----SITDCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~----~~~~~~g~~~~~ 217 (456)
..+|++++|++.+. +..++++ +++.++.+++.+++++|| +|+++.|.|.... ..+...|+++..
T Consensus 65 ~~~le~~lA~l~g~-------~~av~~~-sG~~Ai~~al~al~~~Gd----~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~ 132 (389)
T PRK05968 65 VRAFEEMLAKLEGA-------EDARGFA-SGMAAISSTVLSFVEPGD----RIVAVRHVYPDAFRLFETILKRMGVEVDY 132 (389)
T ss_pred HHHHHHHHHHHhCC-------CcEEEEC-CHHHHHHHHHHHHhCCCC----EEEEeCCCchHHHHHHHHHHHHcCceEEE
Confidence 37999999999864 3345554 556899999999999999 9999999998743 455667988877
Q ss_pred ecc-Ccccccc--CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC-CCCCCCCCCCcEEEecCcccc
Q 012785 218 WAG-DAKRFNK--DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ-YTSITYPADHDLMLFTVSKST 288 (456)
Q Consensus 218 ~~~-d~~~l~~--~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~-~~~~~~~~~~~i~i~S~SK~~ 288 (456)
++. |.+.++. .++++|++++|.||++.+.+ ++|+++|+++|+|++|..+. ..++ ..+-++++.|+||.+
T Consensus 133 vd~~d~~~l~~~i~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p~--~~g~Divv~S~tK~l 210 (389)
T PRK05968 133 VDGRDEEAVAKALPGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRPI--TLGVDLVIHSASKYL 210 (389)
T ss_pred eCCCCHHHHHHhcccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCch--hcCCcEEEeeccccc
Confidence 665 4555543 35789999999999988755 37889999999999997542 2233 234579999999999
Q ss_pred CCCC-ceEEEEEEeCHHHHHHHHHHHh-hccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 012785 289 GHAG-TRIGWALVKDMEVAKKMTKYIE-LNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRM 366 (456)
Q Consensus 289 g~~G-~RiG~l~~~~~~~~~~l~~~~~-~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 366 (456)
+.+| ++.|+++.+ ++++++++.... ......+++.+..+...|+ .+....++-.++.+.+.+
T Consensus 211 ~g~~~~~gG~i~~~-~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~---------------tl~~r~~~~~~~a~~la~ 274 (389)
T PRK05968 211 GGHSDTVAGVVAGS-KEHIARINAEAYPYLGAKLSPFEAWLLLRGLR---------------TLPLRMKAHEASALEIAR 274 (389)
T ss_pred cCCCCeEEEEEEEC-HHHHHHHHHHHHHhCCCCCChHHHHHHHcccC---------------cHHHHHHHHHHHHHHHHH
Confidence 7655 588998875 888888876543 2344567666666555444 223344445556778889
Q ss_pred HHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCC-----------------
Q 012785 367 AVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFG----------------- 427 (456)
Q Consensus 367 ~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg----------------- 427 (456)
.|++++.++....+|.-.+. .+.....+..+-+++++ +...+.+.|+..++.+.-|..+.
T Consensus 275 ~L~~~p~v~~v~~p~l~~~~-~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~ 353 (389)
T PRK05968 275 RLKAHPVVERVCHPALANHP-PAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQQKAQPNS 353 (389)
T ss_pred HHHhCCCccEEECCCCCCCh-HHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeCcccccccCCHHH
Confidence 99988766544322210000 00001112245555642 34567777777777666554432
Q ss_pred -----CCCCeEEEEecC
Q 012785 428 -----FSPKYVRISMLD 439 (456)
Q Consensus 428 -----~~~~~iRis~~~ 439 (456)
..++.||+|++.
T Consensus 354 ~~~~gi~~~liR~SvGl 370 (389)
T PRK05968 354 AARFGVSPRSVRLHVGL 370 (389)
T ss_pred HHhcCCCCCeEEEEecc
Confidence 135789999965
No 213
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.83 E-value=7.7e-19 Score=175.66 Aligned_cols=273 Identities=15% Similarity=0.114 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcC----CCCCCCcEEEEeCCCCCChhhhhhhcCCeEeee
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSS----QDASEPISVVSAAPYYSSYPSITDCVKSRLYKW 218 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~----~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~ 218 (456)
.++++.++++++. ++.++++++|+++++..++.++.. +++ +|++.+++|..+...++..|.++..+
T Consensus 62 ~~~~~~la~~~g~------~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~----~vl~~~~~h~s~~~~~~~~g~~~~~v 131 (371)
T PRK13520 62 EEAVEMLGELLHL------PDAYGYITSGGTEANIQAVRAARNLAKAEKP----NIVVPESAHFSFDKAADMLGVELRRA 131 (371)
T ss_pred HHHHHHHHHHhCC------CCCCeEEecCcHHHHHHHHHHHHhhccCCCc----eEEecCcchHHHHHHHHHcCceEEEe
Confidence 4566666666643 345788999999999999887754 356 89999999999998888899988876
Q ss_pred cc------Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC--C--C--CCCC-CCCC
Q 012785 219 AG------DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ--Y--T--SITY-PADH 277 (456)
Q Consensus 219 ~~------d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~--~--~--~~~~-~~~~ 277 (456)
+. |.+.++. ++++.++++.++||||.+.+ ++|+++|+++++|++|.+.. + . .+.. ..+-
T Consensus 132 ~~~~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~v 211 (371)
T PRK13520 132 PLDDDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGV 211 (371)
T ss_pred cCCCCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCC
Confidence 64 3444443 24666777788999999987 38999999999999997421 1 1 1111 1223
Q ss_pred cEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhcc--------CcCChHHHHHHHHHHHhhhCCCCCCCCcchhH
Q 012785 278 DLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNT--------IGVSKDSQLRAAKVLKVVSDSCKPSGSEDECF 349 (456)
Q Consensus 278 ~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~--------~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~ 349 (456)
+.+..|..| ++.+|.++|++++.++++++.+........ ...+.....++...|+.+. ++.
T Consensus 212 d~~~~s~~K-~~~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~----------~~g 280 (371)
T PRK13520 212 DSITIDPHK-MGLAPIPAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLG----------REG 280 (371)
T ss_pred ceEEECCcc-ccCccCCceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhc----------HhH
Confidence 455567778 566889999988765777776642211100 0112334555555565321 334
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcc-ccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCC
Q 012785 350 FEFTNHQMSTRWKQLRMAVQKSGLFS-VPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGF 428 (456)
Q Consensus 350 l~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~ 428 (456)
+++.+++..++++.+.+.|++.+ +. +..+ ..+++.++++ +.+.+.+.|.++||.+.++.
T Consensus 281 ~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~--------------~~~~v~~~~~-~~~~v~~~L~~~gi~v~~~~---- 340 (371)
T PRK13520 281 YRKVVERCMENTRWLAEELKERG-FEPVIEP--------------VLNIVAFDDP-NPDEVREKLRERGWRVSVTR---- 340 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CEEecCC--------------CceEEEEecC-CHHHHHHHHHHCCceeccCC----
Confidence 56788888899999999998863 44 2222 2235666766 56678888888999998743
Q ss_pred CCCeEEEEec--CChhHHHHHHHHHHhhhC
Q 012785 429 SPKYVRISML--DRDENYNLFVQRLSKILS 456 (456)
Q Consensus 429 ~~~~iRis~~--~~~e~i~~~l~~L~~~l~ 456 (456)
.++++|+|+. .++++++.+++.|+++++
T Consensus 341 ~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 341 CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 2578999976 389999999999998763
No 214
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.83 E-value=1.6e-18 Score=173.08 Aligned_cols=281 Identities=12% Similarity=0.091 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhh----hhhcCCeEeee
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSI----TDCVKSRLYKW 218 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~----~~~~g~~~~~~ 218 (456)
.+|++.++++++. ++++++++++.++.+++. ++++|| +|++++|.|..+... +...|+++..+
T Consensus 50 ~~le~~la~l~g~--------~~~l~~~sG~~al~~~l~-ll~~Gd----~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v 116 (378)
T TIGR01329 50 TALESLLAKLDKA--------DRAFAFSSGMAALDVITR-LLNNGD----EIIAGDDLYGGTDRLLTQVVPRSGVVVVHV 116 (378)
T ss_pred HHHHHHHHHHhCC--------CcEEEECCHHHHHHHHHH-HhCCCC----EEEEcCCCchHHHHHHHHHHHHcCcEEEEe
Confidence 5777777777652 355555666679998876 779999 999999999887653 45579998877
Q ss_pred cc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC-CCCCCCCCCCcEEEecCcccc
Q 012785 219 AG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ-YTSITYPADHDLMLFTVSKST 288 (456)
Q Consensus 219 ~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~-~~~~~~~~~~~i~i~S~SK~~ 288 (456)
+. |.+.++. .++++|++++|+||||.+.+ ++|+++|+++|+|++|..+. ..++ ..+-+++++|++|.+
T Consensus 117 d~~d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~~~l--~~g~Di~v~S~tK~l 194 (378)
T TIGR01329 117 DTTDLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLCNPL--ELGADIVYHSATKFL 194 (378)
T ss_pred CCCCHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh--hcCCcEEEEecceec
Confidence 75 4555543 46899999999999999877 47899999999999986432 2223 224579999999988
Q ss_pred C-CCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 012785 289 G-HAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMA 367 (456)
Q Consensus 289 g-~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 367 (456)
+ +.+++.|+++++++++.++++..+.....+.++.....+...+ +.+....++..++...+.+.
T Consensus 195 ~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l---------------~tl~~R~e~~~~na~~la~~ 259 (378)
T TIGR01329 195 AGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGI---------------KTLAIRIEKQQENARAIAMF 259 (378)
T ss_pred cCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccC---------------CCHHHHHHHHHHHHHHHHHH
Confidence 5 4568999999866777788887766445556666544333322 24555666777888888889
Q ss_pred HHhcCCccccCCCCcc----cccccccCCCCCceEEeecCc-c-HHHHHHHHHhCCEEeecCCCCC--------------
Q 012785 368 VQKSGLFSVPELPSQF----CTFLGRAFEPQPAFAWLKCEQ-E-IEDCESFLKGNKILTRSGKHFG-------------- 427 (456)
Q Consensus 368 L~~~~~~~~~~~~g~~----~~~~~~~~~~~~~f~~~~~~~-~-~~~~~~~l~~~gI~v~pg~~fg-------------- 427 (456)
|++++.+.....+|.- .....+.....+..+.+.+.+ . ...+...|+..+|.++-|....
T Consensus 260 L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~ 339 (378)
T TIGR01329 260 LSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSITVSFGSVNSLISMPCFMSHASIP 339 (378)
T ss_pred HHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcccccCCCCCCceeeCCCccccccCC
Confidence 9887654322211110 000111111122334555632 2 4567777777888888876531
Q ss_pred --------CCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 428 --------FSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 428 --------~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
..++.||+|++. |+.+.+++.|.+.|
T Consensus 340 ~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al 373 (378)
T TIGR01329 340 AEVREERGLPEDLVRLSVGI--EDVDDLISDLDIAF 373 (378)
T ss_pred HHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHH
Confidence 125789999964 33445555555544
No 215
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=1.6e-18 Score=175.28 Aligned_cols=206 Identities=15% Similarity=0.167 Sum_probs=149.0
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChh----hhhhhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYP----SITDCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~----~~~~~~g~~~~~ 217 (456)
...|++.+|++.+. ++.++++|+++++..++..++++|| +|+++.|.|+... ..++..|++++.
T Consensus 66 ~~~Le~~lA~leg~--------~~al~~~sG~~Ai~~al~~ll~~GD----~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~ 133 (431)
T PRK08248 66 TDVFEKRIAALEGG--------IGALAVSSGQAAITYSILNIASAGD----EIVSSSSLYGGTYNLFAHTLPKLGITVKF 133 (431)
T ss_pred HHHHHHHHHHHhCC--------CcEEEECCHHHHHHHHHHHHhCCCC----EEEEccCchhhHHHHHHHHHHhCCEEEEE
Confidence 37888889988852 4677888889999999999999999 9999999997643 345667999887
Q ss_pred ecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCcccc
Q 012785 218 WAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKST 288 (456)
Q Consensus 218 ~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~ 288 (456)
++. |.+.++. .++++|++++|+||||.+++ ++|+++|+++|+|++|..+ ....+...+.+++++|++|.+
T Consensus 134 vd~~d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~-~~~~pl~~gaDivv~S~tK~l 212 (431)
T PRK08248 134 VDPSDPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASP-YLLRPIEHGADIVVHSATKFI 212 (431)
T ss_pred ECCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCcc-ccCChhHcCCCEEEEcCcccc
Confidence 765 4555543 36799999999999999987 4789999999999998743 111222456789999999999
Q ss_pred CCCCceEEEEEEeCHHH---------------------------------HHHHHHHHhhccCcCChHHHHHHHHHHHhh
Q 012785 289 GHAGTRIGWALVKDMEV---------------------------------AKKMTKYIELNTIGVSKDSQLRAAKVLKVV 335 (456)
Q Consensus 289 g~~G~RiG~l~~~~~~~---------------------------------~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~ 335 (456)
|.+|.++|++++...+. ...............+++..+.+..-|+
T Consensus 213 gg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~-- 290 (431)
T PRK08248 213 GGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQGLE-- 290 (431)
T ss_pred CCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhcCcC--
Confidence 99999999988742211 0111122223345556655554444443
Q ss_pred hCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 012785 336 SDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFS 375 (456)
Q Consensus 336 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 375 (456)
.+....++..++...+.+.|++++.+.
T Consensus 291 -------------tl~~R~~~~~~nA~~la~~L~~~p~v~ 317 (431)
T PRK08248 291 -------------TLHLRMERHSENALAVAKFLEEHEAVE 317 (431)
T ss_pred -------------cHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 344455666777888999999987654
No 216
>PRK14012 cysteine desulfurase; Provisional
Probab=99.83 E-value=4.8e-19 Score=179.14 Aligned_cols=277 Identities=13% Similarity=0.112 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhc----CCCCCCCcEEEEeCCCCCChhhhhhh---cCCeE
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALS----SQDASEPISVVSAAPYYSSYPSITDC---VKSRL 215 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~----~~gd~~~~~Vlv~~P~y~~~~~~~~~---~g~~~ 215 (456)
.++|+.++++++. ++++|++|+|+++++++++.++. .+|| +|++++++|+......+. .|+++
T Consensus 52 ~~~r~~ia~~~g~------~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd----~Vi~~~~~~~s~~~~~~~~~~~g~~~ 121 (404)
T PRK14012 52 DIARNQIADLIGA------DPREIVFTSGATESDNLAIKGAAHFYQKKGK----HIITSKTEHKAVLDTCRQLEREGFEV 121 (404)
T ss_pred HHHHHHHHHHcCc------CcCeEEEeCCHHHHHHHHHHHHHHhhcCCCC----EEEEecCccHHHHHHHHHHHhCCCEE
Confidence 6778888888864 45789999999999999988764 6788 999999999887655443 48888
Q ss_pred eeeccCc------ccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCC-CCCCCCCCcEE
Q 012785 216 YKWAGDA------KRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYT-SITYPADHDLM 280 (456)
Q Consensus 216 ~~~~~d~------~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~-~~~~~~~~~i~ 280 (456)
+.++.|. +.++. .+++++++++++||||.+++ ++|+++|+++|+|+++...... .+ ...+-+++
T Consensus 122 ~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~-~~~~~D~~ 200 (404)
T PRK14012 122 TYLDPQSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDL-SKLKVDLM 200 (404)
T ss_pred EEEccCCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCc-ccCCCCEE
Confidence 7766543 33332 36789999999999999987 3889999999999998743221 12 22345788
Q ss_pred EecCccccCCCCceEEEEEEeCHHHHHHHHHHHh------hccCcC-ChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHH
Q 012785 281 LFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIE------LNTIGV-SKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFT 353 (456)
Q Consensus 281 i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~------~~~~~~-s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~ 353 (456)
++|++|.+| |+ ++|+++++ ++...++..... ....+. +........+.++.. +...+..
T Consensus 201 ~~s~~K~~g-p~-g~G~l~~~-~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~-----------~~~~~~~ 266 (404)
T PRK14012 201 SFSAHKIYG-PK-GIGALYVR-RKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIA-----------KEEMATE 266 (404)
T ss_pred EEehhhccC-CC-ceEEEEEe-cCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHH-----------HhhHHHH
Confidence 899999887 54 69999987 433222222100 011222 222233333444421 2234456
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCC-----
Q 012785 354 NHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGF----- 428 (456)
Q Consensus 354 ~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~----- 428 (456)
.++.++.++.+.+.|++++.+.+..... ...+...++|+.+.+ .+.+...+ +++.|..|..|..
T Consensus 267 ~~~~~~l~~~l~~~L~~~~~i~~~~~~~--------~~~~~~~~~~~~~~~-~~~~~~~l--~~~~i~~g~~~~~~~~~~ 335 (404)
T PRK14012 267 NERIRALRDRLWNGIKDIEEVYLNGDLE--------QRVPGNLNVSFNYVE-GESLIMAL--KDLAVSSGSACTSASLEP 335 (404)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEeCCcc--------ccCCCEEEEEEeCcC-HHHHHHhC--CCeEEEchhhhCCCCCCC
Confidence 6777788888888887765444321100 001111145555432 23455555 3788888766522
Q ss_pred -------------CCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 429 -------------SPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 429 -------------~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
..+.||+++.. ++++++.+++.|++++
T Consensus 336 ~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~ 377 (404)
T PRK14012 336 SYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSI 377 (404)
T ss_pred CHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 13789999975 8899999999999875
No 217
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=1.8e-18 Score=173.74 Aligned_cols=284 Identities=12% Similarity=0.130 Sum_probs=186.7
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhh----hhhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSI----TDCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~----~~~~g~~~~~ 217 (456)
..+|++.+|++.+. .+.+.+++++.|+.+++.+++++|| +|+++.++|.+.... +...|+++..
T Consensus 63 v~~lE~~la~leg~--------~~av~~~SG~aAi~~al~all~~GD----~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~ 130 (432)
T PRK06702 63 LAAFEQKLAELEGG--------VGAVATASGQAAIMLAVLNICSSGD----HLLCSSTVYGGTFNLFGVSLRKLGIDVTF 130 (432)
T ss_pred HHHHHHHHHHHhCC--------CcEEEECCHHHHHHHHHHHhcCCCC----EEEECCCchHHHHHHHHHHHHHCCCEEEE
Confidence 37889999998853 4678899999999999999999999 999999999876665 5778998876
Q ss_pred ecc--Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCcc-
Q 012785 218 WAG--DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSK- 286 (456)
Q Consensus 218 ~~~--d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK- 286 (456)
+.. |.+.++. .++++|++++|+||++.+.+ ++|+++|+++|+|++|.-|... -+...+-+|+++|+||
T Consensus 131 vd~~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~~-~pl~~GADIvv~S~TKy 209 (432)
T PRK06702 131 FNPNLTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYLC-QAFEHGANIIVHSTTKY 209 (432)
T ss_pred ECCCCCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhhC-ChhhcCCCEEEEccccc
Confidence 654 5556643 47899999999999999877 4889999999999998633111 1123345699999999
Q ss_pred ----ccCCCCceE-----EEEEEeCHHHHH---------------------HHH-HHHhhccCcCChHHHHHHHHHHHhh
Q 012785 287 ----STGHAGTRI-----GWALVKDMEVAK---------------------KMT-KYIELNTIGVSKDSQLRAAKVLKVV 335 (456)
Q Consensus 287 ----~~g~~G~Ri-----G~l~~~~~~~~~---------------------~l~-~~~~~~~~~~s~~~q~~a~~~L~~~ 335 (456)
..+++|+++ +|...+++++.+ +.+ ..........+++....+...|+.
T Consensus 210 ~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~T- 288 (432)
T PRK06702 210 IDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLET- 288 (432)
T ss_pred cCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCc-
Confidence 777888887 676554333321 111 222234567888888887777762
Q ss_pred hCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCc----ccccccccC-CCCCceEEeecCccHHHHH
Q 012785 336 SDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQ----FCTFLGRAF-EPQPAFAWLKCEQEIEDCE 410 (456)
Q Consensus 336 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~----~~~~~~~~~-~~~~~f~~~~~~~~~~~~~ 410 (456)
++...++..++...+.+.|+.++.+.....+|. .+.+.++.. ...+..+.+.++++.+...
T Consensus 289 --------------l~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~ 354 (432)
T PRK06702 289 --------------LHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGLEAAK 354 (432)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHH
Confidence 334455556888999999999876654433321 111111112 1223445667654444444
Q ss_pred HHHHhCCEEe---e----------cCCC------------CCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 411 SFLKGNKILT---R----------SGKH------------FGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 411 ~~l~~~gI~v---~----------pg~~------------fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
+.+..-.+.. . |.+. .|..++.||||++. |+.+.+++.|.+.|
T Consensus 355 ~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGl--Ed~eDLi~Dl~~Al 422 (432)
T PRK06702 355 EFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI--EDVSDIIADLEAAL 422 (432)
T ss_pred HHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHH
Confidence 4444333321 1 1110 11135789999964 34555666666654
No 218
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.83 E-value=9.8e-19 Score=176.75 Aligned_cols=277 Identities=12% Similarity=0.115 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhc----CCCCCCCcEEEEeCCCCCChhhhh---hhcCCeE
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALS----SQDASEPISVVSAAPYYSSYPSIT---DCVKSRL 215 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~----~~gd~~~~~Vlv~~P~y~~~~~~~---~~~g~~~ 215 (456)
.++|+.++++++. ++++|++|+|+++++++++.++. .+|+ +|+++.+.|+.+.... +..|+++
T Consensus 50 ~~~r~~la~~~g~------~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~----~Vi~~~~~h~s~~~~~~~~~~~g~~v 119 (402)
T TIGR02006 50 ENARNQVAELIGA------DSREIVFTSGATESNNLAIKGIAHFYKSKGN----HIITSKTEHKAVLDTCRYLEREGFEV 119 (402)
T ss_pred HHHHHHHHHHhCC------CCCeEEEeCCHHHHHHHHHHHHHHhhcCCCC----EEEECCCccHHHHHHHHHHHhcCCEE
Confidence 5678888888764 45789999999999999887763 5788 9999999998766544 3458888
Q ss_pred eeeccC------cccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcEE
Q 012785 216 YKWAGD------AKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHDLM 280 (456)
Q Consensus 216 ~~~~~d------~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i~ 280 (456)
+.++.+ .+.++. .+++++++++|+||||.+.+ ++|+++|+++++|+++..... ++. ...+-+++
T Consensus 120 ~~v~~~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~-~~~~~~~~~D~~ 198 (402)
T TIGR02006 120 TYLPPKSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKI-PINVNELKVDLM 198 (402)
T ss_pred EEEccCCCCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCc-ccCccccCCCEE
Confidence 777654 333332 35789999999999999987 488999999999999874322 221 22345789
Q ss_pred EecCccccCCCCceEEEEEEeCHHHHHHHHHHH-------hhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHH
Q 012785 281 LFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYI-------ELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFT 353 (456)
Q Consensus 281 i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~-------~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~ 353 (456)
+.|..|.+|.+| +|++++. ++...++.... .......+.....++.+.++.+ .+.++..
T Consensus 199 ~~s~~K~~gp~G--~G~l~~~-~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~-----------~~~~~~~ 264 (402)
T TIGR02006 199 SISGHKIYGPKG--IGALYVR-RKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIA-----------KEEMAQD 264 (402)
T ss_pred EEehhhhcCCCc--eEEEEEc-cCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHH-----------HHhHHHH
Confidence 999999888557 8999887 43332222111 1112233444444444666632 2346677
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCC-----
Q 012785 354 NHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGF----- 428 (456)
Q Consensus 354 ~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~----- 428 (456)
.++.++.++.+.+.|++++.+.+..+.... .+....+.+... +.+.+...+ ++|.++.|..+..
T Consensus 265 ~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~-------~p~~~~v~f~~~--~~~~~~~~l--~~i~v~~G~~c~~~~~~~ 333 (402)
T TIGR02006 265 TAHVLALRDRLLNGIKSIEEVYLNGDLEHR-------VPGNLNVSFNYV--EGESLIMAL--KDLAVSSGSACTSASLEP 333 (402)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEeCCcccc-------CCCeEEEEEeCc--CHHHHHHhc--CCEEEechhhcCCCCCCc
Confidence 788999999999999887654443211100 011111222112 333444333 5899988877632
Q ss_pred -------------CCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 429 -------------SPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 429 -------------~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
..+.+|+|+.. ++||++.+++.|++++
T Consensus 334 ~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~ 375 (402)
T TIGR02006 334 SYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAI 375 (402)
T ss_pred cHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 13789999975 8999999999998875
No 219
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.82 E-value=1.2e-18 Score=175.92 Aligned_cols=270 Identities=13% Similarity=0.073 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcC---------CCCCCCcEEEEeCCCCCChhh-hhhhcC
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSS---------QDASEPISVVSAAPYYSSYPS-ITDCVK 212 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~---------~gd~~~~~Vlv~~P~y~~~~~-~~~~~g 212 (456)
.+|.+.++++++ .+.+++++++++++..+++.+.. +++. .|+..+-+|++... .....+
T Consensus 82 ~~l~~~l~~~~~--------~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~---~i~~~~~~yhg~~~~~~~~~~ 150 (401)
T TIGR01885 82 GEFAEYVTKLFG--------YDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQA---IIVSAKGNFHGRTLGAISMST 150 (401)
T ss_pred HHHHHHHHhhcC--------CCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCC---EEEEECCCcCcccHHHHhCcC
Confidence 567777777653 24889999999999999998632 2221 78889999987532 222211
Q ss_pred ------------CeEeeecc-Ccccccc------CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCC
Q 012785 213 ------------SRLYKWAG-DAKRFNK------DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYY 264 (456)
Q Consensus 213 ------------~~~~~~~~-d~~~l~~------~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~ 264 (456)
..+..++. |.+.++. .+..++++..+++++|.+.+ ++|+++++++|.||+|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~ 230 (401)
T TIGR01885 151 DPDSRTNFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQT 230 (401)
T ss_pred CcccccccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 11222221 4444432 24567788788999999876 27999999999999997
Q ss_pred CCCCCCCC-----CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCC
Q 012785 265 WPQYTSIT-----YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSC 339 (456)
Q Consensus 265 ~~~~~~~~-----~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~ 339 (456)
+..+++-. .....+++ ++||.++..|+|+||++.+ +++++.+.......+++.+++.+.++.+.|+.+.+.
T Consensus 231 g~g~~G~~~~~~~~~~~~di~--~~gK~l~~g~~~ig~v~~~-~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~- 306 (401)
T TIGR01885 231 GLGRTGKLLCVDHENVKPDIV--LLGKALSGGVYPVSAVLAD-DDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEE- 306 (401)
T ss_pred CCCccchhhHHhhcCCCCCEE--EeeccccCCCCCcEEEEEc-HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhc-
Confidence 64333211 11122333 5789998666999999996 888888765434457788999999999999865432
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcC--CccccCCCCcccccccccCCCCCceEEeecCc---cHHHHHHHHH
Q 012785 340 KPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSG--LFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ---EIEDCESFLK 414 (456)
Q Consensus 340 ~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~~l~ 414 (456)
...++.++..+++.+.|++++ .+...++.|.+. -++++.+. ....+...|.
T Consensus 307 ------------~l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~g~~~------------~i~~~~~~~~~~~~~l~~~l~ 362 (401)
T TIGR01885 307 ------------KLAENAEKLGEIFRDQLKKLPKPIITEVRGRGLLN------------AIVIDESKTGRTAWDLCLKLK 362 (401)
T ss_pred ------------cHHHHHHHHHHHHHHHHHhccCCceeEEeecCeeE------------EEEeccCcchhHHHHHHHHHH
Confidence 234556666788888888763 112223344441 12333332 3456777888
Q ss_pred hCCEEeecCCCCCCCCCeEEEEec--CChhHHHHHHHHHHhhhC
Q 012785 415 GNKILTRSGKHFGFSPKYVRISML--DRDENYNLFVQRLSKILS 456 (456)
Q Consensus 415 ~~gI~v~pg~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l~ 456 (456)
++||.+.|+ .++.+||+.. .+++++++++++|+++++
T Consensus 363 ~~Gv~v~~~-----~~~~lRi~p~l~~t~~~i~~~l~~l~~~l~ 401 (401)
T TIGR01885 363 EKGLLAKPT-----HGNIIRLAPPLVITEEQLDEGLEIIKKVID 401 (401)
T ss_pred hCCEEEEec-----CCCEEEEeCCccCCHHHHHHHHHHHHHHhC
Confidence 999999874 2678999964 499999999999999875
No 220
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.82 E-value=9.5e-18 Score=167.02 Aligned_cols=202 Identities=8% Similarity=0.052 Sum_probs=152.7
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhh----hhhcCCeEeee
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSI----TDCVKSRLYKW 218 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~----~~~~g~~~~~~ 218 (456)
..|++++|++.+. +++++++|+++|+..++.+++++|| +|++++|.|+..... .+..|+++..+
T Consensus 53 ~~lE~~lA~l~g~--------~~~~~~~sG~~Ai~~al~all~~GD----~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~ 120 (377)
T TIGR01324 53 FALQDAMCELEGG--------AGCYLYPSGLAAVTNSILAFVKAGD----HVLMVDSAYEPTRYFCDIVLKRMGVDITYY 120 (377)
T ss_pred HHHHHHHHHHhCC--------CcEEEECcHHHHHHHHHHHhcCCCC----EEEEcCCCcHHHHHHHHHHHHhcCcEEEEE
Confidence 6999999999862 4788999999999999999999999 999999999887643 34567777665
Q ss_pred ccCc-ccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC-CCCCCCCCCCcEEEecCcccc
Q 012785 219 AGDA-KRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ-YTSITYPADHDLMLFTVSKST 288 (456)
Q Consensus 219 ~~d~-~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~-~~~~~~~~~~~i~i~S~SK~~ 288 (456)
+.+. +.++. .++++|++++|+||+|.+.+ ++|+++|+++|+|++|..+. +.++ ..+-+++++|++|.+
T Consensus 121 d~~~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~pl--~~gaDivv~S~tK~l 198 (377)
T TIGR01324 121 DPLIGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFKPL--EHGVDISIQAGTKYL 198 (377)
T ss_pred CCCCHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCcc--ccCceEEEecCceec
Confidence 4422 34432 46899999999999999876 47899999999999998542 2233 345679999999999
Q ss_pred C-CCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 012785 289 G-HAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMA 367 (456)
Q Consensus 289 g-~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 367 (456)
+ ++++..|++++. ++..++++..........++.....+...++ .+....++..++...+.+.
T Consensus 199 ~G~~d~~gG~v~~~-~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~---------------tl~~R~~~~~~~a~~la~~ 262 (377)
T TIGR01324 199 VGHSDIMIGTVVAN-ARTWDQLREHSYLMGQMVDADDAYTTLRGLR---------------TLGVRLKQHQESSLAIAKW 262 (377)
T ss_pred cCCCCceEEEEEeC-HHHHHHHHHHHHHhCCCCCHHHHHHHHhhhh---------------hHHHHHHHHHHHHHHHHHH
Confidence 5 556889998885 7777777765554455566655555544444 3444566677777788999
Q ss_pred HHhcCCc
Q 012785 368 VQKSGLF 374 (456)
Q Consensus 368 L~~~~~~ 374 (456)
|++++.+
T Consensus 263 L~~~p~v 269 (377)
T TIGR01324 263 LSEQPEV 269 (377)
T ss_pred HHhCCCc
Confidence 9988754
No 221
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=2e-18 Score=174.77 Aligned_cols=260 Identities=10% Similarity=0.013 Sum_probs=169.1
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhc-C---------------CeEeeeccC-----
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCV-K---------------SRLYKWAGD----- 221 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~-g---------------~~~~~~~~d----- 221 (456)
+.++++++++||++.+++.... .|.. +|+...-+|++....+... | ...++++.+
T Consensus 102 ~~v~f~~SGseA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 178 (425)
T PRK07495 102 KKTIFVTTGAEAVENAVKIARAATGRS---AVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVS 178 (425)
T ss_pred CEEEECCchHHHHHHHHHHHHHhhCCC---eEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccccccc
Confidence 5899999999999999987643 2322 8999999999976443322 1 111233321
Q ss_pred ----cccc----c----cCCCeEEEEcCC-CCCCccc-ch--------HHhhhcCcEEEeeecCCCCCCCCCC---CCCC
Q 012785 222 ----AKRF----N----KDGPYIELVTSP-NNPDGSV-RQ--------SVVNRSGGILVHDLAYYWPQYTSIT---YPAD 276 (456)
Q Consensus 222 ----~~~l----~----~~~~~~i~v~~P-~NPtG~~-~~--------~l~~~~~~~iI~De~y~~~~~~~~~---~~~~ 276 (456)
.+.+ + ..+..++++... +| +|.. ++ ++|+++|+++|+||+|.+..+.+-. ...+
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~g 257 (425)
T PRK07495 179 VEQSLAALDKLFKADVDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHE 257 (425)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccC
Confidence 1111 1 124556666433 45 7744 34 3899999999999999875444421 2233
Q ss_pred CcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHH
Q 012785 277 HDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQ 356 (456)
Q Consensus 277 ~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~ 356 (456)
.+..+.||||.++ +|+|+||++++ +++++.+.......+++.+++++.++.+.|+.+.++. ..++++++.+.
T Consensus 258 v~pDi~tlsK~l~-~G~pigav~~~-~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~------l~~~~~~~g~~ 329 (425)
T PRK07495 258 VAADLTTMAKGLA-GGFPLAAVTGR-AEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEED------LCERANQLGNR 329 (425)
T ss_pred CCCCEEeehhhhc-CCccceEEEEc-HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhch------HHHHHHHHHHH
Confidence 4556899999999 99999999997 8888887665556789999999999999988765541 12333333333
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCcc---------HHHHHHHHHhCCEEeecCCCCC
Q 012785 357 MSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQE---------IEDCESFLKGNKILTRSGKHFG 427 (456)
Q Consensus 357 ~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~---------~~~~~~~l~~~gI~v~pg~~fg 427 (456)
++++. .+..++.+.+.-.+..| .++|+.+.+. ...+.+.+.++||.+.+. +
T Consensus 330 l~~~L---~~l~~~~~~i~~vrG~G--------------l~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---g 389 (425)
T PRK07495 330 LKQRL---ASLRETVPEIADIRGPG--------------FMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTC---G 389 (425)
T ss_pred HHHHH---HHHHhhCCCeeeeecCc--------------eEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeec---C
Confidence 33332 22222233222222223 2688887321 245677788999999763 2
Q ss_pred CCCCeEEEE--ecCChhHHHHHHHHHHhhh
Q 012785 428 FSPKYVRIS--MLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 428 ~~~~~iRis--~~~~~e~i~~~l~~L~~~l 455 (456)
...+.+||. +..+++++++++++|.+.+
T Consensus 390 ~~~~~~r~~Ppl~it~~~id~~~~~l~~~l 419 (425)
T PRK07495 390 VHGNVIRFLAPITIQDDVFAEALDILEASI 419 (425)
T ss_pred CCCCEEEEeCCCccCHHHHHHHHHHHHHHH
Confidence 234789998 4359999999999999876
No 222
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=6.4e-18 Score=170.75 Aligned_cols=206 Identities=15% Similarity=0.150 Sum_probs=144.2
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhh----cCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDC----VKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~----~g~~~~~ 217 (456)
..+|++++|++.+. +..++++++++++.+++.+++++|| +|+++.|.|+.....+.. .|.++..
T Consensus 60 ~~~Le~~lA~l~g~--------~~~l~~ssG~~Ai~~al~al~~~Gd----~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~ 127 (425)
T PRK06084 60 NDVLEQRVAALEGG--------VGALAVASGMAAITYAIQTIAEAGD----NIVSVAKLYGGTYNLLAHTLPRIGIETRF 127 (425)
T ss_pred HHHHHHHHHHHhCC--------CceeEehhHHHHHHHHHHHHhCCCC----EEEEeCCCcchHHHHHHHhcccceeEEEE
Confidence 37899999998852 2455677777999999999999999 999999999965554432 4656554
Q ss_pred ecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCcccc
Q 012785 218 WAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKST 288 (456)
Q Consensus 218 ~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~ 288 (456)
++. |.+.++. .++++|++++|+||||.+++ ++|+++++++|+|++|..+.. ..+...+-+++++|++|.+
T Consensus 128 ~d~~d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~-~~p~~~gaDivv~S~tK~l 206 (425)
T PRK06084 128 AAHDDIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVL-CRPFEHGADIVVHSLTKYI 206 (425)
T ss_pred ECCCCHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-CChhhcCCCEEEECchhcc
Confidence 443 5555543 36789999999999999987 488999999999999984321 1112335679999999999
Q ss_pred CCCCceEEEEEEeCHHH--HH---H-------------------------H----HHHHhhccCcCChHHHHHHHHHHHh
Q 012785 289 GHAGTRIGWALVKDMEV--AK---K-------------------------M----TKYIELNTIGVSKDSQLRAAKVLKV 334 (456)
Q Consensus 289 g~~G~RiG~l~~~~~~~--~~---~-------------------------l----~~~~~~~~~~~s~~~q~~a~~~L~~ 334 (456)
+.+|.++|.+++.++.+ .+ . + ...........+++..+.+..-|+
T Consensus 207 ~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~- 285 (425)
T PRK06084 207 GGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLE- 285 (425)
T ss_pred cccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcC-
Confidence 98999999988752211 00 0 0 011222345566665555554444
Q ss_pred hhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 012785 335 VSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFS 375 (456)
Q Consensus 335 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 375 (456)
.+....++..++...+.+.|++++.+.
T Consensus 286 --------------tl~~R~~~~~~na~~la~~L~~~p~v~ 312 (425)
T PRK06084 286 --------------TLALRMERHTENALKVARYLQQHPQVA 312 (425)
T ss_pred --------------cHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 344556666777788899999887654
No 223
>PRK05939 hypothetical protein; Provisional
Probab=99.82 E-value=1.4e-17 Score=167.02 Aligned_cols=280 Identities=14% Similarity=0.161 Sum_probs=177.3
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhh---hhhhcCCeEeeec
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPS---ITDCVKSRLYKWA 219 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~---~~~~~g~~~~~~~ 219 (456)
.+|+++++++.+. ...+++++| +.|+..++.+++++|| +|+++++.|+.... .++..|+++..++
T Consensus 50 ~~lE~~la~leg~-------~~~v~~ssG-~~Ai~~~l~all~~Gd----~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~ 117 (397)
T PRK05939 50 AALEAKITKMEGG-------VGTVCFATG-MAAIAAVFLTLLRAGD----HLVSSQFLFGNTNSLFGTLRGLGVEVTMVD 117 (397)
T ss_pred HHHHHHHHHHhCC-------CeEEEeCCH-HHHHHHHHHHHcCCCC----EEEECCCccccHHHHHHHHHhcCCEEEEEC
Confidence 3899999998863 334555555 8999999999999999 99999999987543 4556798888776
Q ss_pred c-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC-CCCCCCCCCCcEEEecCccccC
Q 012785 220 G-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ-YTSITYPADHDLMLFTVSKSTG 289 (456)
Q Consensus 220 ~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~-~~~~~~~~~~~i~i~S~SK~~g 289 (456)
. |.+.++. .++++|++++|+||||.+.+ ++|+++|+++|+|++|..+. +.+ ...+.+++++|+||.++
T Consensus 118 ~~d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~--~~~gaDivv~S~sK~~~ 195 (397)
T PRK05939 118 ATDVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWLFRP--KDVGASLVINSLSKYIA 195 (397)
T ss_pred CCCHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccccCc--cccCCEEEEecCeeccc
Confidence 5 4566543 46899999999999999866 47899999999999987432 122 23367899999999999
Q ss_pred CCCceEEEEEEeCHH--------H-------------HHHHHH-HHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcch
Q 012785 290 HAGTRIGWALVKDME--------V-------------AKKMTK-YIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDE 347 (456)
Q Consensus 290 ~~G~RiG~l~~~~~~--------~-------------~~~l~~-~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~ 347 (456)
.+|.++|++++.+.. + ...++. .........++.....+..-++
T Consensus 196 g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~-------------- 261 (397)
T PRK05939 196 GHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGAE-------------- 261 (397)
T ss_pred CCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcC--------------
Confidence 899999998874221 1 111211 1122334455655554444333
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcc----cccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecC
Q 012785 348 CFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQF----CTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSG 423 (456)
Q Consensus 348 ~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~----~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg 423 (456)
.+.-..++..++...+.+.|+.++.+.....+|.- ....++.+...+..+-+++++. +...+.+..-.+. ..+
T Consensus 262 -tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~-~~~~~f~~~l~l~-~~~ 338 (397)
T PRK05939 262 -TLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADG-IDCFDFLNRLKLV-IKA 338 (397)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCH-HHHHHHHHhCCcc-eEc
Confidence 23334444555888899999998755432222200 0111112223344566677532 3444555444442 111
Q ss_pred CCC--------------------------CCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 424 KHF--------------------------GFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 424 ~~f--------------------------g~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
..+ |..++.||||++. |+.+.+++.|.+.|
T Consensus 339 ~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGl--Ed~~dLi~dl~~Al 394 (397)
T PRK05939 339 THLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGI--EDEADLIADFEQAL 394 (397)
T ss_pred cCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHHHH
Confidence 111 1125689999964 34556666666655
No 224
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.81 E-value=2e-17 Score=165.06 Aligned_cols=263 Identities=16% Similarity=0.137 Sum_probs=166.1
Q ss_pred CceEEEccCHHHHHHHHHHHh-cCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCccc-------ccc---CCCe
Q 012785 163 NHHIVVGTGSTQLFQAALYAL-SSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKR-------FNK---DGPY 231 (456)
Q Consensus 163 ~~~I~~t~G~~~al~~~~~~l-~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~-------l~~---~~~~ 231 (456)
.+++++|+|+++++.+++.++ .++|| +|++++|+|+.+...+...|++++.+++|.++ ++. .+++
T Consensus 46 ~~~~v~~~sgt~aL~~~l~al~~~pGd----~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~~tk 121 (376)
T TIGR02379 46 TKKALLTPSCTAALEMAALLLDIQPGD----EVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITHRTK 121 (376)
T ss_pred CCeEEEeCCHHHHHHHHHHHcCCCCcC----EEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCce
Confidence 358999999999999999988 78999 99999999999999999999999887766443 222 2567
Q ss_pred EEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC-CCCCCCCCCCcEEEecCc----cccCCCCceEEEEEEe
Q 012785 232 IELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ-YTSITYPADHDLMLFTVS----KSTGHAGTRIGWALVK 301 (456)
Q Consensus 232 ~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~-~~~~~~~~~~~i~i~S~S----K~~g~~G~RiG~l~~~ 301 (456)
+|+ |+||+|...+ ++|+++|++||+|++|.... +.+.+ .+....+.+|| |.+. +|.+.|+++++
T Consensus 122 ~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~--~g~~~~~~~fSf~~~K~l~-~g~~gG~v~~~ 195 (376)
T TIGR02379 122 AIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGRA--LGSIGHLGTFSFHETKNYT-SGGEGGALLIN 195 (376)
T ss_pred EEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCcc--cCCCCCEEEEeCCCCCcCc-ccCCceEEEEC
Confidence 775 6778898766 38999999999999987532 32221 12222344444 8886 78899999998
Q ss_pred CHHHHHHHHHHHhhcc-----------------CcCChHHHHH-HHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHH
Q 012785 302 DMEVAKKMTKYIELNT-----------------IGVSKDSQLR-AAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQ 363 (456)
Q Consensus 302 ~~~~~~~l~~~~~~~~-----------------~~~s~~~q~~-a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 363 (456)
++++.++++..+.... .|.+.-.+.. |+-.+.. -+.+++..+.-++..+.
T Consensus 196 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~q------------L~~l~~~~~~r~~~~~~ 263 (376)
T TIGR02379 196 DQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQ------------LEQADRINQDRLATWQL 263 (376)
T ss_pred CHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHH------------HHHhHHHHHHHHHHHHH
Confidence 8999999988764210 1211111111 1211121 11222333333333333
Q ss_pred HHHHHHhcC---CccccC-CCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCC----C------CC
Q 012785 364 LRMAVQKSG---LFSVPE-LPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGK----H------FG 427 (456)
Q Consensus 364 l~~~L~~~~---~~~~~~-~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~----~------fg 427 (456)
..+.|.++. ....+. +.+...++ .+.++.++. +.+.+.+.|+++||.++++. . |+
T Consensus 264 y~~~L~~~~~~~~~~~~~~~~~~~~~~---------~~~~i~~~~~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~ 334 (376)
T TIGR02379 264 YQDALKPLEEKGIIELPSIPNGCQHNA---------HMFYIKLKDEDDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFG 334 (376)
T ss_pred HHHHhccCCcCCeeeCCCCCCCCeeee---------EEEEEEECCcCCHHHHHHHHHHCCCCccccCcCCCcchhHHhhC
Confidence 555555432 112211 12211110 023566653 57889999999999987432 1 11
Q ss_pred C-----------CCCeEEEEecC--ChhHHHHHHHHHHhhhC
Q 012785 428 F-----------SPKYVRISMLD--RDENYNLFVQRLSKILS 456 (456)
Q Consensus 428 ~-----------~~~~iRis~~~--~~e~i~~~l~~L~~~l~ 456 (456)
. ..+.+.|.+.. ++++++..++.|+++++
T Consensus 335 ~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~~ 376 (376)
T TIGR02379 335 RFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYLS 376 (376)
T ss_pred CCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHhC
Confidence 0 02346666543 88999999999998764
No 225
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.81 E-value=7e-18 Score=168.38 Aligned_cols=205 Identities=12% Similarity=0.080 Sum_probs=144.9
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhh----hhhhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPS----ITDCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~----~~~~~g~~~~~ 217 (456)
...|+++++++.+. +..+++++|. .++.+++ .++++|| +|++++|.|+.... .+...|+++..
T Consensus 52 ~~~Le~~la~l~g~-------~~al~~~SG~-~Al~~~l-~~l~pGd----~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~ 118 (380)
T PRK06176 52 RFALEELIADLEGG-------VKGFAFASGL-AGIHAVF-SLFQSGD----HVLLGDDVYGGTFRLFDKVLVKNGLSCTI 118 (380)
T ss_pred HHHHHHHHHHHhCC-------CCEEEECCHH-HHHHHHH-HHcCCCC----EEEEcCCChhHHHHHHHHHHHhcCeEEEE
Confidence 37899999998863 3456676665 6888776 4678999 99999999986543 34556887776
Q ss_pred ecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCcccc
Q 012785 218 WAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKST 288 (456)
Q Consensus 218 ~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~ 288 (456)
++. |.+.++. .++++|++++|+||||.+.+ ++|+++|+++|+|++|..+.. ..+...+-+++++|++|.+
T Consensus 119 vd~~d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~-~~p~~~gaDivv~S~tK~l 197 (380)
T PRK06176 119 IDTSDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYY-QNPLLLGADIVVHSGTKYL 197 (380)
T ss_pred cCCCCHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCcccccc-CCccccCCCEEEecCceec
Confidence 654 4555543 36899999999999999977 488999999999999985422 1222345679999999999
Q ss_pred CCCC-ceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 012785 289 GHAG-TRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMA 367 (456)
Q Consensus 289 g~~G-~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 367 (456)
+.+| .-.|++++.++++.++++..+.......++...+.+...++ .+....++..++...+.+.
T Consensus 198 ~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~---------------tl~~R~~~~~~~a~~la~~ 262 (380)
T PRK06176 198 GGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIK---------------TLGLRMEAHQKNALCVAEF 262 (380)
T ss_pred cCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccC---------------cHHHHHHHHHHHHHHHHHH
Confidence 7555 45677777557888888877665444456655544433332 2344455555677788889
Q ss_pred HHhcCCcc
Q 012785 368 VQKSGLFS 375 (456)
Q Consensus 368 L~~~~~~~ 375 (456)
|++++.+.
T Consensus 263 L~~~p~v~ 270 (380)
T PRK06176 263 LEKHPKVE 270 (380)
T ss_pred HHhCCCee
Confidence 98876543
No 226
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=3.9e-18 Score=173.78 Aligned_cols=272 Identities=10% Similarity=0.014 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhcCC--------
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCVKS-------- 213 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~g~-------- 213 (456)
.+|.+.++++... ..+.+++++++++|++.+++.... .|.. +|+..+-+|++....+.....
T Consensus 89 ~~la~~L~~~~~~------~~~~v~f~~SGseA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~~~s~~~~~~~~~~~ 159 (433)
T PRK08117 89 LKLAEELAEITPG------GLDCFFFSNSGAEAIEGALKLAKHVTKRP---YIISFTGCFHGRTLGALSVTTSKSKYRKY 159 (433)
T ss_pred HHHHHHHHHhCCC------CCCEEEEeCcHHHHHHHHHHHHHHhcCCC---eEEEECCCcCCcCHHHHhhcCCCcccccc
Confidence 4555555555411 235899999999999999986432 2321 799999999987654432211
Q ss_pred --------eEeeecc----------------Cccccc--------cCCCeEEEEcCCCCCCcccch---------HHhhh
Q 012785 214 --------RLYKWAG----------------DAKRFN--------KDGPYIELVTSPNNPDGSVRQ---------SVVNR 252 (456)
Q Consensus 214 --------~~~~~~~----------------d~~~l~--------~~~~~~i~v~~P~NPtG~~~~---------~l~~~ 252 (456)
..++++- |.+.++ ..+..+|++...+.-.|.+.+ ++|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~ 239 (433)
T PRK08117 160 YQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDR 239 (433)
T ss_pred CCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHH
Confidence 1111110 111121 124556666555666677654 38999
Q ss_pred cCcEEEeeecCCCCCCCCCC---CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHH
Q 012785 253 SGGILVHDLAYYWPQYTSIT---YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAA 329 (456)
Q Consensus 253 ~~~~iI~De~y~~~~~~~~~---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~ 329 (456)
||+++|.||+|.+....+.. ...+-..-+.||||.+| +|+|+|+++++ +++++.+.......+++.+++++.++.
T Consensus 240 ~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK~lg-~G~pigav~~~-~~i~~~~~~~~~~~T~~~np~~~aaa~ 317 (433)
T PRK08117 240 HGILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIA-SGLPLSAVVAS-KELMEQWPLGSHGTTFGGNPVACAAAL 317 (433)
T ss_pred cCCEEEEecchhccCccccchhHhhcCCCCCEeehhhhcc-CCCcceeEEEc-HHHHhhccCCCCCCCCCcCHHHHHHHH
Confidence 99999999999975443321 11122223579999999 99999999996 888888765555567889999999999
Q ss_pred HHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhc----CCccccCCCCcccccccccCCCCCceEEeecCc-
Q 012785 330 KVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKS----GLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ- 404 (456)
Q Consensus 330 ~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~- 404 (456)
+.|+.+... + ..++++++.+.+.+.|+++ +.+.-.+..| .++++.+..
T Consensus 318 a~L~~l~~~---------~----l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G--------------l~~gi~~~~~ 370 (433)
T PRK08117 318 ATLEVIKEE---------K----LLDNANEMGAYALERLEVLKEKHPVIGDVRGIG--------------LMIGIEIVDP 370 (433)
T ss_pred HHHHHHHhc---------c----HHHHHHHHHHHHHHHHHHHHhcCCceeeeecCC--------------cEEEEEEecC
Confidence 999865432 1 2333444444444444432 2211122222 245665521
Q ss_pred -------cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEe--cCChhHHHHHHHHHHhhh
Q 012785 405 -------EIEDCESFLKGNKILTRSGKHFGFSPKYVRISM--LDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 405 -------~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~--~~~~e~i~~~l~~L~~~l 455 (456)
....+.+.+.++||.+.+. +...+++|++. ..+++++++++++|.+++
T Consensus 371 ~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l 427 (433)
T PRK08117 371 DGEPDGDAVEKILDKCLEKGLLFYLC---GNAGNVLRMIPPLTVTKEEIDEGLDILDEAL 427 (433)
T ss_pred CCCcchHHHHHHHHHHHHCCCEEeec---CCCCCEEEEeCCccCCHHHHHHHHHHHHHHH
Confidence 2345677888999998763 23367999994 459999999999998875
No 227
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=6.2e-18 Score=172.39 Aligned_cols=254 Identities=11% Similarity=0.041 Sum_probs=168.3
Q ss_pred ceEEEccCHHHHHHHHHHHhcC--CCCCCCcEEEEeCCCCCChhhhhhhcCC----------------eEee--ecc-Cc
Q 012785 164 HHIVVGTGSTQLFQAALYALSS--QDASEPISVVSAAPYYSSYPSITDCVKS----------------RLYK--WAG-DA 222 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~--~gd~~~~~Vlv~~P~y~~~~~~~~~~g~----------------~~~~--~~~-d~ 222 (456)
+.+++++++++|++.+++.... ..+ +|+...++|++....+..... ...+ ++. +.
T Consensus 118 ~~v~f~~sGseA~e~AlklAr~~tgr~----~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (443)
T PRK06058 118 KRSALFNSGAEAVENAVKIARSYTGRQ----AVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDP 193 (443)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhhCCC----eEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccc
Confidence 4788888889999999985432 223 899999999998865543211 0011 111 10
Q ss_pred ---------------cccc----cCCCeEEEEcCCCCCCccc-ch---------HHhhhcCcEEEeeecCCCCCCCCCC-
Q 012785 223 ---------------KRFN----KDGPYIELVTSPNNPDGSV-RQ---------SVVNRSGGILVHDLAYYWPQYTSIT- 272 (456)
Q Consensus 223 ---------------~~l~----~~~~~~i~v~~P~NPtG~~-~~---------~l~~~~~~~iI~De~y~~~~~~~~~- 272 (456)
+.++ .+++.++++ .|-++.|.+ .+ ++|+++|+++|.||++.+..+++..
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~-EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~f 272 (443)
T PRK06058 194 KGLATDGEEAAARAITVIEKQVGADNLAAVII-EPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWF 272 (443)
T ss_pred cccccchHHHHHHHHHHHHHhhCCCceEEEEE-CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhh
Confidence 1111 134455554 676666444 32 3899999999999999976544421
Q ss_pred --C--CCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchh
Q 012785 273 --Y--PADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDEC 348 (456)
Q Consensus 273 --~--~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~ 348 (456)
. .-..+++ +++|.+| .|+++|+++++ +++++.+.......+++.+++++.++.+.|+.+.+.
T Consensus 273 a~~~~gv~PDiv--~~gK~l~-~G~Pi~av~~~-~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~---------- 338 (443)
T PRK06058 273 ACEHEGIVPDLI--TTAKGIA-GGLPLSAVTGR-AEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEED---------- 338 (443)
T ss_pred HHHhcCCCCCEE--EEccccc-CCCccEEEEEc-HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHc----------
Confidence 1 1122343 5689999 99999999997 889888876656679999999999999999865442
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh----cCCccccCCCCcccccccccCCCCCceEEeec-Cc-----c---HHHHHHHHHh
Q 012785 349 FFEFTNHQMSTRWKQLRMAVQK----SGLFSVPELPSQFCTFLGRAFEPQPAFAWLKC-EQ-----E---IEDCESFLKG 415 (456)
Q Consensus 349 ~l~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~-~~-----~---~~~~~~~l~~ 415 (456)
.+.++++++.+++.+.|++ .+.+.-.++.|.+ +.+.+ ++ + ...+.+.+.+
T Consensus 339 ---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~--------------~~i~~~~~~~~~~~~~~~~~l~~~~~~ 401 (443)
T PRK06058 339 ---DLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAM--------------IAIELVKPGTTEPDAELTKALAAAAHA 401 (443)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceE--------------EEEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 2344455555555555554 3333334555655 33333 11 1 2446666778
Q ss_pred CCEEeecCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhhC
Q 012785 416 NKILTRSGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 416 ~gI~v~pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l~ 456 (456)
+||.+.++..| .+.+|+. +..+++++++++++|.++++
T Consensus 402 ~Gv~~~~~~~~---~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~ 441 (443)
T PRK06058 402 AGVIVLTCGTY---GNVIRLLPPLVIGDELLREGLDVLEAALA 441 (443)
T ss_pred CCeEEeccCCC---CCEEEEECCCccCHHHHHHHHHHHHHHHH
Confidence 99999987555 3689996 55699999999999998863
No 228
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.80 E-value=2.7e-18 Score=174.38 Aligned_cols=270 Identities=14% Similarity=0.082 Sum_probs=178.5
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCC--CCCCCcEEEEeCCCCCChhhhhhhc--------C
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQ--DASEPISVVSAAPYYSSYPSITDCV--------K 212 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~--gd~~~~~Vlv~~P~y~~~~~~~~~~--------g 212 (456)
.+|.+.+++... ..+.+++++++++|++.+++..... ++ +|+..+++|+++...+... +
T Consensus 93 ~~la~~L~~~~~-------~~~~v~~~~sGseA~e~Aik~a~~~~g~~----~ii~~~~~yHG~t~~~~~~~~~~~~~~~ 161 (426)
T PRK00062 93 VELAELVIELVP-------SIEMVRMVNSGTEATMSAIRLARGYTGRD----KIIKFEGCYHGHADSLLVKAGSGAATLG 161 (426)
T ss_pred HHHHHHHHHhCC-------CCCEEEEecCHHHHHHHHHHHHHHHhCCC----eEEEEcCccCCchhhhhhccCccccccC
Confidence 556666655541 1358999999999999999986543 34 8999999999987433221 1
Q ss_pred -----C-------eEeeec-cCcccccc------CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCC
Q 012785 213 -----S-------RLYKWA-GDAKRFNK------DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYY 264 (456)
Q Consensus 213 -----~-------~~~~~~-~d~~~l~~------~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~ 264 (456)
. ..+.++ .|.+.++. .++.+|++..-+.-+|.+.+ ++|++|++++|.||+|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~ 241 (426)
T PRK00062 162 LPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT 241 (426)
T ss_pred CCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh
Confidence 0 011111 13433322 24566666533334777765 37999999999999998
Q ss_pred CCCCCCCC--CCC--CCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHH---HHhhccCcCChHHHHHHHHHHHhhhC
Q 012785 265 WPQYTSIT--YPA--DHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTK---YIELNTIGVSKDSQLRAAKVLKVVSD 337 (456)
Q Consensus 265 ~~~~~~~~--~~~--~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~---~~~~~~~~~s~~~q~~a~~~L~~~~~ 337 (456)
+....... ... ..+ +.+|||.++ .|+++|+++++ +++++.+.. .....+++.+++.+.++.+.|+.+.+
T Consensus 242 G~r~g~~~~~~~~~~~pD--i~~~gK~l~-~G~p~ga~~~~-~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~ 317 (426)
T PRK00062 242 GFRVALGGAQGYYGVTPD--LTTLGKIIG-GGLPVGAFGGR-REIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKE 317 (426)
T ss_pred ccccCCccHHHHhCCCcc--hHhhhhHhh-CCCcceeeeEH-HHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhc
Confidence 54111110 000 112 478999999 99999999986 889888853 23345778999999999999986544
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC-------------c
Q 012785 338 SCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE-------------Q 404 (456)
Q Consensus 338 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~-------------~ 404 (456)
++.+++.++..+..++.+.+.+++++.....++.|.+ +-+.+. +
T Consensus 318 ---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~--------------~~i~l~~~~~~~~~~~~~~~ 374 (426)
T PRK00062 318 ---------PGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSM--------------FGLFFTDEPVTNYADAKKSD 374 (426)
T ss_pred ---------chHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecce--------------EEEEEecCCCcchhhhcccc
Confidence 2455666666666666666666666543334455655 222221 0
Q ss_pred --cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 405 --EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 405 --~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
....+...|.++||.+.|.. .+.+|+++..+++++++++++|++++
T Consensus 375 ~~~~~~i~~~l~~~Gv~v~~~~-----~~~~~~~~~~t~~ei~~~~~~l~~~l 422 (426)
T PRK00062 375 TERFARFFHAMLDEGVYLAPSQ-----FEAGFVSAAHTDEDIEKTLEAARKAF 422 (426)
T ss_pred HHHHHHHHHHHHHCCeEeecCC-----cCceeeeccCCHHHHHHHHHHHHHHH
Confidence 12467788889999998832 24567887669999999999999876
No 229
>PLN02509 cystathionine beta-lyase
Probab=99.80 E-value=6e-17 Score=164.23 Aligned_cols=206 Identities=12% Similarity=0.121 Sum_probs=143.5
Q ss_pred HHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhh----hhhcCCeEeeecc
Q 012785 145 FAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSI----TDCVKSRLYKWAG 220 (456)
Q Consensus 145 lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~----~~~~g~~~~~~~~ 220 (456)
.++++.+++.... ..++.++++|+++++.+++ .++++|| +|++++|.|+.+... ....|+++..++.
T Consensus 134 t~~aLE~~lA~le----g~e~ai~~~SG~aAi~~il-~ll~~GD----~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~ 204 (464)
T PLN02509 134 TRDALESLLAKLD----KADRAFCFTSGMAALSAVT-HLIKNGE----EIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT 204 (464)
T ss_pred HHHHHHHHHHHHh----CCCEEEEeCcHHHHHHHHH-HHhCCCC----EEEEcCCchhhHHHHHHHHHHHCCeEEEEeCC
Confidence 4555555553321 2346677777789997766 5789999 999999999988643 4466888776654
Q ss_pred -Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCccccCCC
Q 012785 221 -DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKSTGHA 291 (456)
Q Consensus 221 -d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 291 (456)
|.+.++. .++++|++++|+||||.+.+ ++|+++|+++|+|++|..+.. ..+...+-+++++|++|.++-+
T Consensus 205 ~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~-~~pl~~gaDivv~S~tK~l~G~ 283 (464)
T PLN02509 205 TNLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGH 283 (464)
T ss_pred CCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCcccccc-CChhhcCCcEEEecCcccccCC
Confidence 3444543 36799999999999999865 378999999999999875421 2222335679999999988643
Q ss_pred C-ceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 012785 292 G-TRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQK 370 (456)
Q Consensus 292 G-~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~ 370 (456)
| +=.|.+++.++.+.++++..+.......++.....+...|+ .+....++.+++.+.+.+.|++
T Consensus 284 gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~---------------tL~~R~~r~~~nA~~la~~L~~ 348 (464)
T PLN02509 284 SDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIK---------------TMALRIEKQQENARKIAMYLSS 348 (464)
T ss_pred CccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhhh---------------hHHHHHHHHHHHHHHHHHHHhc
Confidence 3 44677777556677766655543344456665444444443 4566677788888999999998
Q ss_pred cCCcc
Q 012785 371 SGLFS 375 (456)
Q Consensus 371 ~~~~~ 375 (456)
++.++
T Consensus 349 ~p~V~ 353 (464)
T PLN02509 349 HPRVK 353 (464)
T ss_pred CCCcc
Confidence 87654
No 230
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.79 E-value=2.1e-18 Score=171.46 Aligned_cols=267 Identities=14% Similarity=0.110 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcC----CC-CCCCcEEEEeCCCCCChh---hhhhhcCCe
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSS----QD-ASEPISVVSAAPYYSSYP---SITDCVKSR 214 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~----~g-d~~~~~Vlv~~P~y~~~~---~~~~~~g~~ 214 (456)
.++|+.++++++. ++++|++|+|++++++.++.++.. +| + .|++....|+.+. ..++..|++
T Consensus 45 ~~~r~~la~~~g~------~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~----~vi~~~~~~~s~~~~~~~~~~~G~~ 114 (353)
T TIGR03235 45 ERARKQVAEALGA------DTEEVIFTSGATESNNLAILGLARAGEQKGKK----HIITSAIEHPAVLEPIRALERNGFT 114 (353)
T ss_pred HHHHHHHHHHhCC------CCCeEEEeCCHHHHHHHHHHHHHHhcccCCCC----eeeEcccccHHHHHHHHHHHhcCCE
Confidence 5788888888764 457899999999999999988864 34 4 7888876666543 334556888
Q ss_pred EeeeccC------cccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcE
Q 012785 215 LYKWAGD------AKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHDL 279 (456)
Q Consensus 215 ~~~~~~d------~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i 279 (456)
++.++.+ .+.++. .+++++++++|+||||.+++ ++|+++|+++|+|+++..... ++. ...+-++
T Consensus 115 v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~-~~~~~~~~~D~ 193 (353)
T TIGR03235 115 VTYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKI-TVDLSADRIDL 193 (353)
T ss_pred EEEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCc-cccccccCCCE
Confidence 8876654 333432 35789999999999999987 478999999999999774322 221 2335678
Q ss_pred EEecCccccCCCCceEEEEEEeCHHHHHH--HHHH-------HhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHH
Q 012785 280 MLFTVSKSTGHAGTRIGWALVKDMEVAKK--MTKY-------IELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFF 350 (456)
Q Consensus 280 ~i~S~SK~~g~~G~RiG~l~~~~~~~~~~--l~~~-------~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l 350 (456)
++.|..|.+|.+| +|+++++ ++.... +... ........+.....++.+.++.+ .+.+
T Consensus 194 ~~~s~~K~~gp~g--~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~-----------~~~~ 259 (353)
T TIGR03235 194 ISCSGHKIYGPKG--IGALVIR-KRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIA-----------RRNA 259 (353)
T ss_pred EEeehhhcCCCCc--eEEEEEc-cCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHH-----------HhhH
Confidence 9999999888667 8999997 543221 1110 00112234444445555555532 2345
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhCCEEeecCCCCCC-
Q 012785 351 EFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGNKILTRSGKHFGF- 428 (456)
Q Consensus 351 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~gI~v~pg~~fg~- 428 (456)
+..+++++++++.+++.|++. ++++..++... .+..+-+.++. +.+++.+.|++ +|.+.+|..|+.
T Consensus 260 ~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~----------~~~i~~~~~~~~~~~~v~~~L~~-~i~v~~g~~~~~~ 327 (353)
T TIGR03235 260 QAWEVKLRAMRNQLRDALQTL-GVKLNGDPAET----------IPHILNFSIDGVNSEALIVNLRA-DAAVSTGSACSSS 327 (353)
T ss_pred HHHHHHHHHHHHHHHHHhccC-CeEEeCCcccc----------cCCEEEEEeCCcCHHHHHHHHhC-CeEEEchhhcCCC
Confidence 677888999999999999874 45443222111 11123333443 56778888865 999999999964
Q ss_pred --CCCeEEEEecCChhHHHH
Q 012785 429 --SPKYVRISMLDRDENYNL 446 (456)
Q Consensus 429 --~~~~iRis~~~~~e~i~~ 446 (456)
.+.++|.+++.+++++..
T Consensus 328 ~~~~~~~l~~~g~~~~~~~~ 347 (353)
T TIGR03235 328 KYEPSHVLQAMGLDTDRARG 347 (353)
T ss_pred CCCCCHHHHHcCCCHHHhCc
Confidence 244788888766655443
No 231
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.79 E-value=5.1e-17 Score=162.66 Aligned_cols=275 Identities=12% Similarity=0.081 Sum_probs=178.0
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHh-cCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYAL-SSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l-~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~ 220 (456)
..+|++++|++++. +++++++|+++++.+++.++ +++|| +|++++|+|..+...+...|++++.++.
T Consensus 35 ~~~le~~la~~~g~--------~~~v~~~sgt~al~lal~al~~~~Gd----~Viv~~~~~~~~~~~~~~~G~~~v~vd~ 102 (379)
T PRK11658 35 NQALEQAFCQLTGN--------QHAIAVSSATAGMHITLMALGIGPGD----EVITPSLTWVSTLNMIVLLGATPVMVDV 102 (379)
T ss_pred HHHHHHHHHHHhCC--------CeEEEECCHHHHHHHHHHHcCCCCCC----EEEECCCcHHHHHHHHHHcCCEEEEEec
Confidence 38999999999974 36888999999999999999 78999 9999999999999999999999987766
Q ss_pred Cccc-------ccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCC-CCCCCCCCCCCCcEEEecC
Q 012785 221 DAKR-------FNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYW-PQYTSITYPADHDLMLFTV 284 (456)
Q Consensus 221 d~~~-------l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~-~~~~~~~~~~~~~i~i~S~ 284 (456)
|.+. ++. .++++|+ |+||+|...+ ++|+++|+++|+|++|.. ..+.+... ....+.+.||
T Consensus 103 ~~~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~-g~~g~~~~Sf 178 (379)
T PRK11658 103 DRDTLMVTPEAIEAAITPRTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHI-GARGTAIFSF 178 (379)
T ss_pred CCCcCCcCHHHHHHhcccCCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeec-CCCCCEEEeC
Confidence 5433 322 2577776 6678999866 488999999999999983 22222111 1122357788
Q ss_pred ccccCCCCceEEEEEEeCHHHHHHHHHHHhhcc--------------------CcCC-hHHH-HHHHHHHHhhhCCCCCC
Q 012785 285 SKSTGHAGTRIGWALVKDMEVAKKMTKYIELNT--------------------IGVS-KDSQ-LRAAKVLKVVSDSCKPS 342 (456)
Q Consensus 285 SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~--------------------~~~s-~~~q-~~a~~~L~~~~~~~~~~ 342 (456)
+|...+++.+.|+++.+++++.++++..+.... .|.+ .+.. .++.....
T Consensus 179 ~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~q--------- 249 (379)
T PRK11658 179 HAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQ--------- 249 (379)
T ss_pred CCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHH---------
Confidence 876667778899999877899988877542110 0111 0111 12222221
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCC-cccccccccCCCCCceE-EeecC-----ccHHHHHHHHHh
Q 012785 343 GSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPS-QFCTFLGRAFEPQPAFA-WLKCE-----QEIEDCESFLKG 415 (456)
Q Consensus 343 ~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g-~~~~~~~~~~~~~~~f~-~~~~~-----~~~~~~~~~l~~ 415 (456)
.+.+++..++-++..+.+.+.|++++...+..+.. ...+ .++ .+.++ .+.+.+.+.|++
T Consensus 250 ----l~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~r~~~~~~L~~ 315 (379)
T PRK11658 250 ----LAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHA----------WHLFIIRVDEERCGISRDALMEALKE 315 (379)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCcee----------EEEEEEEECCccccCCHHHHHHHHHH
Confidence 12345555555566666677777665332322211 0000 011 22332 146778889999
Q ss_pred CCEEeecCC----C------------CCC----CCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 416 NKILTRSGK----H------------FGF----SPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 416 ~gI~v~pg~----~------------fg~----~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
+||.+++.. . |.. ....+.+.+.. ++|+++..++.|++++
T Consensus 316 ~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 316 RGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred CCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 999876321 0 100 12345555432 8899999999999875
No 232
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=9.4e-17 Score=159.74 Aligned_cols=202 Identities=10% Similarity=0.125 Sum_probs=147.9
Q ss_pred HHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhh----hhhhcCCeEeeec
Q 012785 144 EFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPS----ITDCVKSRLYKWA 219 (456)
Q Consensus 144 ~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~----~~~~~g~~~~~~~ 219 (456)
.|++.++.+.+ .++.+++++ +++|+..++.+++++|| +|++++|.|+++.. .++..|+++..++
T Consensus 68 ~Le~~la~le~-------~~~~v~~sS-G~aAi~~~l~all~~GD----~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd 135 (395)
T PRK05967 68 ALCKAIDALEG-------SAGTILVPS-GLAAVTVPFLGFLSPGD----HALIVDSVYYPTRHFCDTMLKRLGVEVEYYD 135 (395)
T ss_pred HHHHHHHHHhC-------CCCEEEECc-HHHHHHHHHHHhcCCCC----EEEEccCCcHHHHHHHHHHHHhcCeEEEEeC
Confidence 45555554432 234555555 68999999999999999 99999999999875 4567798887776
Q ss_pred cC-cccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC-CCCCCCCCCCcEEEecCcccc-
Q 012785 220 GD-AKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ-YTSITYPADHDLMLFTVSKST- 288 (456)
Q Consensus 220 ~d-~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~-~~~~~~~~~~~i~i~S~SK~~- 288 (456)
.+ .+.++. .++++|++++|+||++.+.+ ++|+++|+++|+|++|..+- +.|+ ..+-+|++.|.+|.+
T Consensus 136 ~~~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~pl--~~GaDivv~S~tKy~~ 213 (395)
T PRK05967 136 PEIGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYFRPL--DFGVDISIHAATKYPS 213 (395)
T ss_pred CCCHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceecChh--HcCCCEEEEecccccC
Confidence 53 233443 46899999999999998866 47889999999999998642 3333 345679999999987
Q ss_pred CCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 012785 289 GHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAV 368 (456)
Q Consensus 289 g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L 368 (456)
|++++..|+++.. +++.+++...........++...+.+..-|+ .+.-..++..++...+.+.|
T Consensus 214 Gh~d~~~G~v~~~-~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~---------------Tl~lR~~~~~~na~~lA~~L 277 (395)
T PRK05967 214 GHSDILLGTVSAN-EKCWPQLLEAHGTLGLCAGPDDTYQILRGLR---------------TMGIRLEHHRKSALEIARWL 277 (395)
T ss_pred CCCCeeEEEEEcC-HHHHHHHHHHHHHcCCCCCHHHHHHHHcCcc---------------cHHHHHHHHHHHHHHHHHHH
Confidence 4667888987764 7777777766655566677776655555444 34445556667778889999
Q ss_pred HhcCCcc
Q 012785 369 QKSGLFS 375 (456)
Q Consensus 369 ~~~~~~~ 375 (456)
++++.+.
T Consensus 278 ~~hp~v~ 284 (395)
T PRK05967 278 EGRPDVA 284 (395)
T ss_pred HhCCCCc
Confidence 9987553
No 233
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.78 E-value=2.4e-17 Score=163.47 Aligned_cols=317 Identities=13% Similarity=0.073 Sum_probs=201.1
Q ss_pred hcCCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEc
Q 012785 90 QDGGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVG 169 (456)
Q Consensus 90 ~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t 169 (456)
..++..+.++||++|..... ++.+.. .-.+....|..... .-++.+.+.+.... .....++++
T Consensus 61 f~sgi~v~~~GH~hP~Vv~A--v~~q~~-----~~~h~~~~~~~~e~-----~v~~ae~L~~~~p~-----~~~~~~~f~ 123 (447)
T COG0160 61 FLSGIAVLNLGHNHPRVVEA--VKRQLA-----KLNHTHTRDLYYEP-----YVELAEKLTALAPG-----SGLKKVFFG 123 (447)
T ss_pred cccCcchhccCCCCHHHHHH--HHHHHH-----HhhcccCCcccchh-----HHHHHHHHHHhCCc-----ccCCeEEec
Confidence 35556778888888865533 332211 11111111211111 13455555544421 024679999
Q ss_pred cCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhcCCe--------------E--eeecc--------Ccc-
Q 012785 170 TGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCVKSR--------------L--YKWAG--------DAK- 223 (456)
Q Consensus 170 ~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~--------------~--~~~~~--------d~~- 223 (456)
+++++|++.+++.... .|.. .|+...-.|++....+..+-.. + ++++. +.+
T Consensus 124 ~sGaeA~E~AiKiAr~~Tgr~---~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~ 200 (447)
T COG0160 124 NSGAEAVEAAIKIARAYTGRP---GVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEE 200 (447)
T ss_pred CCcHHHHHHHHHHHHHHhCCC---cEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhh
Confidence 9999999999997643 2222 7999999999988766554211 1 12211 000
Q ss_pred -------cccc---------CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCCCCCCC-
Q 012785 224 -------RFNK---------DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSITYPADH- 277 (456)
Q Consensus 224 -------~l~~---------~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~~~~~~- 277 (456)
.++. .++.++++..-+.-.|.+.+ ++|+++|+++|.||++.+.+.++-....++
T Consensus 201 ~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~ 280 (447)
T COG0160 201 CGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHF 280 (447)
T ss_pred hhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhc
Confidence 0111 24677777666888888765 389999999999999998777763322221
Q ss_pred cEE--EecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHH
Q 012785 278 DLM--LFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNH 355 (456)
Q Consensus 278 ~i~--i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~ 355 (456)
.|. +-++||.+| .|+.+|.++.. +++.+ ........+++.|+++..++.+.|+.+++. ..+++..+
T Consensus 281 gv~PDivt~aK~ig-~G~Pl~avv~r-~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e---------~L~~~a~~ 348 (447)
T COG0160 281 GVEPDIVTLAKSLG-GGLPLSAVVGR-AEIMD-WPPGGHGGTFGGNPVACAAALAVLDVIEEE---------NLLERAAE 348 (447)
T ss_pred CCCCCEEEeccccc-CCCceeEEecc-HHhcc-cCCcccCCCCCcCHHHHHHHHHHHHHHHHc---------cHHHHHHH
Confidence 112 567999999 79999999997 88888 555566678999999999999999976543 23333333
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC-------c---cHHHHHHHHHhCCEEeecCCC
Q 012785 356 QMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE-------Q---EIEDCESFLKGNKILTRSGKH 425 (456)
Q Consensus 356 ~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~-------~---~~~~~~~~l~~~gI~v~pg~~ 425 (456)
.=+..++.|.+.-++++.+--.+..|. ++-+++- . ..+.+.+.+.++|+.+..+.
T Consensus 349 ~G~~l~~~L~~l~~~~~~IgdVRG~Gl--------------m~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G- 413 (447)
T COG0160 349 LGEYLRDRLEELQEKHPLIGDVRGLGL--------------MIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCG- 413 (447)
T ss_pred HHHHHHHHHHHHHhhcCceecccccce--------------EEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccC-
Confidence 333333344443334454444455554 3555542 1 24567788889999888743
Q ss_pred CCCCCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 426 FGFSPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 426 fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
...+.|||.-. .++|++++++++|.+.+
T Consensus 414 --~~~nviRi~PPL~is~e~~d~~l~il~~al 443 (447)
T COG0160 414 --PHGNVLRILPPLTISDEELDEGLDILEEAL 443 (447)
T ss_pred --CCCcEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 44778999843 49999999999999876
No 234
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.78 E-value=2.7e-17 Score=166.13 Aligned_cols=259 Identities=14% Similarity=0.084 Sum_probs=165.7
Q ss_pred eEEE-ccCHHHHHHHHHHHhcCC-CCCCCcEEEEeCCCCCChhhhhhhcCC-------------eEeeecc---------
Q 012785 165 HIVV-GTGSTQLFQAALYALSSQ-DASEPISVVSAAPYYSSYPSITDCVKS-------------RLYKWAG--------- 220 (456)
Q Consensus 165 ~I~~-t~G~~~al~~~~~~l~~~-gd~~~~~Vlv~~P~y~~~~~~~~~~g~-------------~~~~~~~--------- 220 (456)
.+++ +++++|+++.+++..... |.. +|+...-+|++....+..... .+..++.
T Consensus 100 ~~~f~~~sGseA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 176 (412)
T TIGR02407 100 KVQFPGPTGTNAVESALKLARKVTGRS---NVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVD 176 (412)
T ss_pred eEEEeCCCchHHHHHHHHHHhhhcCCC---eEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchh
Confidence 4655 588999999999876532 221 899999999998765544311 1111111
Q ss_pred Cccccc----c-----CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC-----CCCCC
Q 012785 221 DAKRFN----K-----DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT-----YPADH 277 (456)
Q Consensus 221 d~~~l~----~-----~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~-----~~~~~ 277 (456)
+.+.++ . +++.++++..-+++.|...+ ++|+++|+++|+||++.+.+.++.. ..-+.
T Consensus 177 ~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~P 256 (412)
T TIGR02407 177 TIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEP 256 (412)
T ss_pred HHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCC
Confidence 112222 1 23467777666888898643 3899999999999999865433211 11122
Q ss_pred cEEEecCccccCCC-CceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHh-hhCCCCCCCCcchhHHHHHHH
Q 012785 278 DLMLFTVSKSTGHA-GTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKV-VSDSCKPSGSEDECFFEFTNH 355 (456)
Q Consensus 278 ~i~i~S~SK~~g~~-G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~-~~~~~~~~~~~~~~~l~~~~~ 355 (456)
+ +.+|||.++ + |+|+||++++ +++ +.+.......+++.++++..++.+.|+. +.++ ...++++++.+
T Consensus 257 D--i~~~~K~lg-~~G~pigav~~~-~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~------~l~~~~~~~g~ 325 (412)
T TIGR02407 257 D--IVCLSKSIS-GYGLPLALTLIK-PEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDD------AFEKAVQRKSE 325 (412)
T ss_pred C--EEEechhcc-CCccceeEEEEc-hhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhccc------HHHHHHHHHHH
Confidence 3 446899998 7 9999999997 665 5554444556889999988888888874 4333 12334444444
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCcc--HHHHHHHHHhCCEEeecCCCCCCCCCeE
Q 012785 356 QMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQE--IEDCESFLKGNKILTRSGKHFGFSPKYV 433 (456)
Q Consensus 356 ~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~~l~~~gI~v~pg~~fg~~~~~i 433 (456)
.++++.+.+. +.++.........|+ ++|+.++.. ...+...+.++||.+.+.. ...+.|
T Consensus 326 ~l~~~l~~l~---~~~~~~~~~vrg~Gl-------------~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~---~~~~~l 386 (412)
T TIGR02407 326 IIQERLDRIV---AEYPELIKQVRGRGL-------------MQGIECGDGDLAGKIAKAAFENGLIIETSG---PNDEVI 386 (412)
T ss_pred HHHHHHHHHH---hhCCCceEeeeccee-------------EEEEEecChHHHHHHHHHHHHCCCEEeccC---CCCCEE
Confidence 4444333322 223311111122233 789998642 4567788889999998743 225679
Q ss_pred EEEec--CChhHHHHHHHHHHhhhC
Q 012785 434 RISML--DRDENYNLFVQRLSKILS 456 (456)
Q Consensus 434 Ris~~--~~~e~i~~~l~~L~~~l~ 456 (456)
|++.. .+++++++++++|++.++
T Consensus 387 r~~p~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 387 KLLPPLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHh
Confidence 98865 399999999999998874
No 235
>PLN02651 cysteine desulfurase
Probab=99.77 E-value=3.5e-17 Score=163.33 Aligned_cols=269 Identities=13% Similarity=0.075 Sum_probs=176.2
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHh----cCCCCCCCcEEEEeCCCCCChhhh---hhhcCCeE
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYAL----SSQDASEPISVVSAAPYYSSYPSI---TDCVKSRL 215 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l----~~~gd~~~~~Vlv~~P~y~~~~~~---~~~~g~~~ 215 (456)
.++|+.++++++. ++++|++|+|+++++++++..+ .++|| +|++....|+.+... ++..|.++
T Consensus 46 ~~~r~~la~~~g~------~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~----~vl~~~~~h~s~~~~~~~~~~~g~~v 115 (364)
T PLN02651 46 EKARAQVAALIGA------DPKEIIFTSGATESNNLAIKGVMHFYKDKKK----HVITTQTEHKCVLDSCRHLQQEGFEV 115 (364)
T ss_pred HHHHHHHHHHhCC------CCCeEEEeCCHHHHHHHHHHHHHHhccCCCC----EEEEcccccHHHHHHHHHHHhcCCEE
Confidence 5677777777753 4578999999999988887665 36788 999988777654433 33468887
Q ss_pred eeeccC------cccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEE
Q 012785 216 YKWAGD------AKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLML 281 (456)
Q Consensus 216 ~~~~~d------~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i 281 (456)
..++.+ .+.++. .+++++++++++||||.+.+ ++|+++|+++++|.++......--....+-++++
T Consensus 116 ~~v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~ 195 (364)
T PLN02651 116 TYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMS 195 (364)
T ss_pred EEEccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccCCCCEEE
Confidence 766543 333332 36789999999999999987 4889999999999999853221112334568999
Q ss_pred ecCccccCCCCceEEEEEEeCHHHHHHHHHHH-------hhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHH
Q 012785 282 FTVSKSTGHAGTRIGWALVKDMEVAKKMTKYI-------ELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTN 354 (456)
Q Consensus 282 ~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~-------~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~ 354 (456)
.|..|.+|.+| +|+++++ ++....+.... .......+.....++.+.|+.+ .+..++.+
T Consensus 196 ~s~hK~~gp~G--~g~l~v~-~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~-----------~~~~~~i~ 261 (364)
T PLN02651 196 ISGHKIYGPKG--VGALYVR-RRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELA-----------MKEMDYDE 261 (364)
T ss_pred echhhhCCCCc--eEEEEEc-CCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHH-----------HHhHHHHH
Confidence 99999655444 8999987 54443332221 0122334555556666666633 22346677
Q ss_pred HHHHHHHHHHHHHHHh-cCCccccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhCCEEeecCCCCCCC---
Q 012785 355 HQMSTRWKQLRMAVQK-SGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGNKILTRSGKHFGFS--- 429 (456)
Q Consensus 355 ~~~~~~~~~l~~~L~~-~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~gI~v~pg~~fg~~--- 429 (456)
++.++.++.+.+.|++ .+++.+..|...- ...+..+-+.+++ +.+.+...|.+ |.++.|+.+...
T Consensus 262 ~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~--------~~~~~i~~~~~~~~~~~~~~~~L~~--i~v~~g~~c~~~~~~ 331 (364)
T PLN02651 262 KHMKALRERLLNGLRAKLGGVRVNGPRDPE--------KRYPGTLNLSFAYVEGESLLMGLKE--VAVSSGSACTSASLE 331 (364)
T ss_pred HHHHHHHHHHHHHHHhhCCCEEEECCCCcc--------cCcCCEEEEEeCCCCHHHHHHHhCC--EEEEchhhcCCCCCC
Confidence 8888888888888875 4555555432100 0111233344443 56677777765 999999866321
Q ss_pred ---------------CCeEEEEecC--ChhHHH
Q 012785 430 ---------------PKYVRISMLD--RDENYN 445 (456)
Q Consensus 430 ---------------~~~iRis~~~--~~e~i~ 445 (456)
.+.+|+|+.. ++||++
T Consensus 332 ~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 332 PSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred cCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 3789999975 667653
No 236
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=4.7e-16 Score=157.56 Aligned_cols=207 Identities=13% Similarity=0.092 Sum_probs=145.3
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhh----hhhhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPS----ITDCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~----~~~~~g~~~~~ 217 (456)
..+|++.+|++.+. +..++++++++|+.+++.+++++|| +|+++.++|..... .+...|++++.
T Consensus 65 ~~~le~~lA~l~g~--------~~al~~~SG~~Ai~~al~all~pGd----~VIv~~~~y~~t~~~~~~~~~~~G~~v~~ 132 (427)
T PRK05994 65 NAVLEERVAALEGG--------TAALAVASGHAAQFLVFHTLLQPGD----EFIAARKLYGGSINQFGHAFKSFGWQVRW 132 (427)
T ss_pred HHHHHHHHHHHhCC--------CcEEEEcCHHHHHHHHHHHHhCCCC----EEEEecCcchhHHHHHHHHHHhcCcEEEE
Confidence 36788999998863 3567788888999999999999999 99999999996443 35667988887
Q ss_pred ecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCcccc
Q 012785 218 WAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKST 288 (456)
Q Consensus 218 ~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~ 288 (456)
++. |.+.++. .++++|++++|+||||.+++ ++|+++|+++|+|++|..+. ...+...+-++++.|++|.+
T Consensus 133 vd~~d~~~l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~-~~~pl~~gaDivv~S~tK~l 211 (427)
T PRK05994 133 ADADDPASFERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPY-LIRPIEHGADIVVHSLTKFL 211 (427)
T ss_pred ECCCCHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccc-cCCccccCCcEEEEcCcccc
Confidence 765 4455543 36899999999999999977 47899999999999998532 11122345679999999999
Q ss_pred CCCCceEEEEEEeCHH-----------------------HHHHHH----------HHHhhccCcCChHHHHHHHHHHHhh
Q 012785 289 GHAGTRIGWALVKDME-----------------------VAKKMT----------KYIELNTIGVSKDSQLRAAKVLKVV 335 (456)
Q Consensus 289 g~~G~RiG~l~~~~~~-----------------------~~~~l~----------~~~~~~~~~~s~~~q~~a~~~L~~~ 335 (456)
|-+|-.+|.+++.... +.+.+. ..........+++..+.+..-|+
T Consensus 212 gg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~l~-- 289 (427)
T PRK05994 212 GGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGIE-- 289 (427)
T ss_pred CCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcCcc--
Confidence 8778778876663110 111110 01122233455555544444333
Q ss_pred hCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q 012785 336 SDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSV 376 (456)
Q Consensus 336 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~ 376 (456)
.+....++..++...+.+.|++++.+..
T Consensus 290 -------------tL~~r~~~~~~~a~~la~~L~~~p~v~~ 317 (427)
T PRK05994 290 -------------TLPLRMQRHSDNALAVAEWLKGHPKVSW 317 (427)
T ss_pred -------------cHHHHHHHHHHHHHHHHHHHHhCCCccE
Confidence 3555566677778888999998876543
No 237
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.76 E-value=5.9e-17 Score=164.00 Aligned_cols=258 Identities=13% Similarity=0.087 Sum_probs=167.7
Q ss_pred ceEEEccCHHHHHHHHHHHhcCC----CCCCCcEEEEeCCCCCChhhhhhhcCC---------------eEeeeccCccc
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQ----DASEPISVVSAAPYYSSYPSITDCVKS---------------RLYKWAGDAKR 224 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~----gd~~~~~Vlv~~P~y~~~~~~~~~~g~---------------~~~~~~~d~~~ 224 (456)
+.++++++++||++.+++..... |.. +|+...-+|++....+..... ..++++ |.+.
T Consensus 135 ~~v~f~~SGsEA~e~AlklAr~~t~~~gr~---~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~-d~~~ 210 (442)
T TIGR03372 135 KYSFFCNSGTESVEAALKLAKAYQSPRGKF---TFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFG-DIEA 210 (442)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHhhcCCc---EEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCC-CHHH
Confidence 57999999999999999876432 332 899999999998755544321 112222 3332
Q ss_pred c----cc-----CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCCC-----CCCCcEEE
Q 012785 225 F----NK-----DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSITY-----PADHDLML 281 (456)
Q Consensus 225 l----~~-----~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~~-----~~~~~i~i 281 (456)
+ +. .+..++++..-+.-.|...+ ++|+++|+++|.||++.+.+.++... .-..+|
T Consensus 211 ~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDi-- 288 (442)
T TIGR03372 211 MLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDI-- 288 (442)
T ss_pred HHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCe--
Confidence 2 21 23466666554655666654 38999999999999998654444221 112234
Q ss_pred ecCccccCCCC-ceEEEEEEeCHHHHHHHHH--HHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHH
Q 012785 282 FTVSKSTGHAG-TRIGWALVKDMEVAKKMTK--YIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMS 358 (456)
Q Consensus 282 ~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~--~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~ 358 (456)
.+|+|.+| .| +++|.++++ +++.+.+.. .....+++.++++..++.+.|+.+.+. +.+++.++.-+
T Consensus 289 vt~gK~lg-~G~~Pigavv~~-~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~---------~l~~~~~~~G~ 357 (442)
T TIGR03372 289 LCLAKALG-GGVMPIGATIAT-EAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEK---------NLPAQAAIKGD 357 (442)
T ss_pred eeehhhhc-CCcccceEEEec-HHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhc---------cHHHHHHHHHH
Confidence 35999998 88 699999996 888887742 244578999999999999999876543 23333333333
Q ss_pred HHHHHHHHHHHhcC-CccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCCCCCCeEEE
Q 012785 359 TRWKQLRMAVQKSG-LFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFGFSPKYVRI 435 (456)
Q Consensus 359 ~~~~~l~~~L~~~~-~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRi 435 (456)
..++.|.+...+.+ .+.-.+..|. ++.+.+.. ....+.+.+.++||++.+.. ...+.+||
T Consensus 358 ~l~~~L~~l~~~~~~~i~~vRG~Gl--------------~~giel~~~~~~~~i~~~l~~~Gvl~~~~~---~~~~~lr~ 420 (442)
T TIGR03372 358 FLLDGFQQLAAEYPDLIIEARGKGL--------------LMAIEFRDNEIGYAFAKELFQQNILVAGTL---NNAKSIRI 420 (442)
T ss_pred HHHHHHHHHHHhCCCceEEEecceE--------------EEEEEeCChHHHHHHHHHHHHCCcEEeecC---CCCCEEEE
Confidence 33333333333333 2222233333 46666643 24567788889999997531 23578998
Q ss_pred Eec--CChhHHHHHHHHHHhhh
Q 012785 436 SML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 436 s~~--~~~e~i~~~l~~L~~~l 455 (456)
... .+++++++++++|.+.+
T Consensus 421 ~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 421 EPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred ECCcccCHHHHHHHHHHHHHhC
Confidence 865 49999999999998864
No 238
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.76 E-value=6.7e-16 Score=154.50 Aligned_cols=264 Identities=14% Similarity=0.102 Sum_probs=168.9
Q ss_pred ceEEEccCHHHHHHHHHHHh-cCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc-------cccc---CCCeE
Q 012785 164 HHIVVGTGSTQLFQAALYAL-SSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK-------RFNK---DGPYI 232 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l-~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-------~l~~---~~~~~ 232 (456)
+++++++|+++++.+++.++ .++|| +|+++.|+|+.+...+...|++++.++.|.+ .++. .++++
T Consensus 47 ~~~v~~~sgt~al~~~l~~~~~~~Gd----~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~~tk~ 122 (375)
T PRK11706 47 AKVLLTPSCTAALEMAALLLDIQPGD----EVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITPKTRA 122 (375)
T ss_pred CeEEEECCHHHHHHHHHHHhCCCCCC----EEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCCCCeE
Confidence 58999999999999988766 68999 9999999999999999999999987766543 3332 25788
Q ss_pred EEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC-CCCCCCCCCCcEEEecCc--cccCCCCceEEEEEEeCHH
Q 012785 233 ELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ-YTSITYPADHDLMLFTVS--KSTGHAGTRIGWALVKDME 304 (456)
Q Consensus 233 i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~-~~~~~~~~~~~i~i~S~S--K~~g~~G~RiG~l~~~~~~ 304 (456)
|+++ ||+|...+ ++|+++|++||+|++|.... +.+.+...-.++.+.||. |.++ +|.+.++++. +++
T Consensus 123 i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~~~K~l~-~g~gG~~~~~-~~~ 197 (375)
T PRK11706 123 IVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETKNYT-AGEGGALLIN-DPA 197 (375)
T ss_pred EEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeeecCcCEEEEeCCCCcccc-ccCCeEEEEC-CHH
Confidence 8765 57897755 37899999999999997432 222111111234455554 9997 7888777765 589
Q ss_pred HHHHHHHHHhhc-----------------cCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 012785 305 VAKKMTKYIELN-----------------TIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMA 367 (456)
Q Consensus 305 ~~~~l~~~~~~~-----------------~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 367 (456)
+.++++..+... ..|.+...+...++++.. . -+.+++..++-+++.+.+.+.
T Consensus 198 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~--q---------l~~l~~~~~~R~~~~~~~~~~ 266 (375)
T PRK11706 198 LIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWA--Q---------LEAADRINQRRLALWQRYYDA 266 (375)
T ss_pred HHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHH--H---------HHHHHHHHHHHHHHHHHHHHH
Confidence 998887776421 123443333333332221 0 123445555555566666777
Q ss_pred HHhcC---CccccC-CCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCC----C------CC----
Q 012785 368 VQKSG---LFSVPE-LPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGK----H------FG---- 427 (456)
Q Consensus 368 L~~~~---~~~~~~-~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~----~------fg---- 427 (456)
|++++ .+.++. +.+... ...+.|+.++. +.+.+.+.|.++||.++... . ++
T Consensus 267 L~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~ 337 (375)
T PRK11706 267 LAPLAEAGRIELPSIPDDCKH---------NAHMFYIKLRDLEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHG 337 (375)
T ss_pred hcCCCcCCeeecCCCCCCCce---------eeEEEEEEECCcCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCC
Confidence 76653 233221 222111 11145666643 57889999999999876431 0 00
Q ss_pred C-------CCCeEEEEecC--ChhHHHHHHHHHHhhhC
Q 012785 428 F-------SPKYVRISMLD--RDENYNLFVQRLSKILS 456 (456)
Q Consensus 428 ~-------~~~~iRis~~~--~~e~i~~~l~~L~~~l~ 456 (456)
. ..+.+-+.+.. ++++++..++.|+++++
T Consensus 338 ~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~~ 375 (375)
T PRK11706 338 EDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFFS 375 (375)
T ss_pred CChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHhC
Confidence 0 12345555432 78999999999998764
No 239
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.75 E-value=2.7e-16 Score=160.27 Aligned_cols=253 Identities=12% Similarity=0.084 Sum_probs=162.8
Q ss_pred eEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhcCC---------------eEeeeccC-------
Q 012785 165 HIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCVKS---------------RLYKWAGD------- 221 (456)
Q Consensus 165 ~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~g~---------------~~~~~~~d------- 221 (456)
.++++++++||.+.+++.... .|.. +|+...-+|++....+..... ..++++..
T Consensus 104 ~~f~~~sGsEA~e~AlklAr~~tgr~---~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (442)
T TIGR00709 104 LQFPGPSGADAVEAAIKLAKTYTGRT---NVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGI 180 (442)
T ss_pred EEEeCCCHHHHHHHHHHHHHHhcCCC---eEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccC
Confidence 356678999999999987643 2322 899999999998766554321 11111100
Q ss_pred -----c-------c-ccc-----cCCCeEEEEcCCCCCCcccc-h--------HHhhhcCcEEEeeecCCCCCCCCCC--
Q 012785 222 -----A-------K-RFN-----KDGPYIELVTSPNNPDGSVR-Q--------SVVNRSGGILVHDLAYYWPQYTSIT-- 272 (456)
Q Consensus 222 -----~-------~-~l~-----~~~~~~i~v~~P~NPtG~~~-~--------~l~~~~~~~iI~De~y~~~~~~~~~-- 272 (456)
. + .++ ..+..++++...++..|.+. + ++|+++|+++|.||+|.+.++++..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a 260 (442)
T TIGR00709 181 GGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFA 260 (442)
T ss_pred CchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhH
Confidence 0 0 111 02456677766566556654 4 3899999999999999976554421
Q ss_pred ---CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhH
Q 012785 273 ---YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECF 349 (456)
Q Consensus 273 ---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~ 349 (456)
..-..+|++ +||.++ .|+++|+++++ ++ .+.+.......+++.+++++.++.+.|+.+.+.
T Consensus 261 ~~~~gv~PDiv~--~gK~l~-~G~Pigav~~~-~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~----------- 324 (442)
T TIGR00709 261 FEHAGIEPDFVV--MSKAVG-GGLPLAVLLIA-PE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDD----------- 324 (442)
T ss_pred HHHcCCCCcEEE--Eccccc-CCcccEEEEEc-hH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhc-----------
Confidence 111234444 899999 69999999997 66 455433334578999999999999999866443
Q ss_pred HHHHHHHHHHHHHHHHHHHHh----cCCccccCCCCcccccccccCCCCCceEEeecCc----------------cHHHH
Q 012785 350 FEFTNHQMSTRWKQLRMAVQK----SGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----------------EIEDC 409 (456)
Q Consensus 350 l~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----------------~~~~~ 409 (456)
.+.+.++++.+.+.+.|++ ++.+.-.+..|.+ +.+.+.. ....+
T Consensus 325 --~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~--------------~~ie~~~~~~~~~~~~~~~~~~~~~~~~ 388 (442)
T TIGR00709 325 --NLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLM--------------QGIMIVDERQSKDATGAYPRDCELAAAI 388 (442)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceE--------------EEEEEccCcccccccccCCcchHHHHHH
Confidence 2333455555555555544 3433334445554 3333311 12446
Q ss_pred HHHHHhCCEEeecCCCCCCCCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 410 ESFLKGNKILTRSGKHFGFSPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 410 ~~~l~~~gI~v~pg~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
...+.++||++.+... ..+.+|+..+ .+++++++++++|.+.+
T Consensus 389 ~~~~~~~Gvl~~~~~~---~~~~l~~~Ppl~it~~ei~~~~~~l~~~l 433 (442)
T TIGR00709 389 QGACFENGLLLETGGR---EGEVFRLLCPITIDQEECEEGISRFKQAV 433 (442)
T ss_pred HHHHHHCCeEEeecCC---CCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 6777899999987432 2567887754 49999999999998876
No 240
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.75 E-value=1.8e-16 Score=160.83 Aligned_cols=256 Identities=13% Similarity=0.066 Sum_probs=159.1
Q ss_pred eEEE-ccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhcC---------------CeEeeec-------c
Q 012785 165 HIVV-GTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCVK---------------SRLYKWA-------G 220 (456)
Q Consensus 165 ~I~~-t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~g---------------~~~~~~~-------~ 220 (456)
.+++ +++++||++.+++.... .|.. +|+...-+|++....+.... ...++++ .
T Consensus 104 ~~~f~~~sGseA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 180 (425)
T PRK09264 104 KVQFTGPTGTNAVEAALKLARKVTGRT---NIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVD 180 (425)
T ss_pred eEEEeCCCHHHHHHHHHHHHHHhcCCC---eEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchh
Confidence 5655 58999999999987643 2322 89999999999876544331 1112222 1
Q ss_pred Ccccccc---------CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC-----CCCCC
Q 012785 221 DAKRFNK---------DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT-----YPADH 277 (456)
Q Consensus 221 d~~~l~~---------~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~-----~~~~~ 277 (456)
|.+.++. ++..+|++..-+.-.|.... ++|++||+++|+||++.+.+.++-. ...+.
T Consensus 181 ~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~P 260 (425)
T PRK09264 181 TLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITP 260 (425)
T ss_pred HHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCC
Confidence 2232321 13456666555665676443 3899999999999999864333211 01122
Q ss_pred cEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHH
Q 012785 278 DLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQM 357 (456)
Q Consensus 278 ~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~ 357 (456)
+ +.+|||.++..|+++|+++++ +++ ..+.......+++.++++..++.+.|+.+... + ...+++
T Consensus 261 D--i~t~~K~l~~~G~pigav~~~-~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~--------~----~l~~~~ 324 (425)
T PRK09264 261 D--IVTLSKSISGYGLPMALVLIK-PEL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWSD--------D----AFEKEV 324 (425)
T ss_pred C--EEEeccccCCCccceEEEEEc-hhh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHhh--------h----HHHHHH
Confidence 3 457899999449999999997 766 34433334457888888888877777422111 1 233444
Q ss_pred HHHHHHHHHHHHh----cCCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCCCCCC
Q 012785 358 STRWKQLRMAVQK----SGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFGFSPK 431 (456)
Q Consensus 358 ~~~~~~l~~~L~~----~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg~~~~ 431 (456)
+++.+.+.+.|++ .+.+. ....| .+.++|+.+++ ....+.+.+.++||.+.+...+ .+
T Consensus 325 ~~~g~~l~~~l~~l~~~~~~~~-~~vrg------------~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~~---~~ 388 (425)
T PRK09264 325 KAKGELVRERLEEIAAKYPGLG-AEVRG------------RGMMQGIDFGDGELAGKIAAEAFENGLIIETSGPE---DE 388 (425)
T ss_pred HHHHHHHHHHHHHHHHhCCCce-eccee------------cccEEEEEecChHHHHHHHHHHHHCCCEEeccCCC---CC
Confidence 4444444444443 33211 11111 12267888854 2456778888999999885432 46
Q ss_pred eEEEEec--CChhHHHHHHHHHHhhh
Q 012785 432 YVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 432 ~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
.||++.. .+++++++++++|.+.+
T Consensus 389 ~lr~~p~l~~t~~ei~~~~~~l~~~l 414 (425)
T PRK09264 389 VVKLLPPLTIDEEELEEGLDILEEAV 414 (425)
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 7888854 48999999999998876
No 241
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.75 E-value=1.6e-16 Score=161.37 Aligned_cols=256 Identities=12% Similarity=0.033 Sum_probs=164.5
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-------CCCCCCcEEEEeCCCCCChhhhhhhcC---------------CeEeeecc-
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-------QDASEPISVVSAAPYYSSYPSITDCVK---------------SRLYKWAG- 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-------~gd~~~~~Vlv~~P~y~~~~~~~~~~g---------------~~~~~~~~- 220 (456)
++++++++++||++.+++.... ++.. +|+...-+|++....+.... ...++++.
T Consensus 103 ~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~---~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (423)
T PRK05964 103 DHVFFSDSGSVAVEVALKMALQYWRNRGEPGRS---RFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPD 179 (423)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCc---EEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcc
Confidence 5899999999999999987642 2322 89999999998765443321 12223331
Q ss_pred C-----ccccc----c--CCCeEEEEcC-CCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC---CCCC
Q 012785 221 D-----AKRFN----K--DGPYIELVTS-PNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT---YPAD 276 (456)
Q Consensus 221 d-----~~~l~----~--~~~~~i~v~~-P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~---~~~~ 276 (456)
| .+.++ . .+..++++.. .++..|.... ++|+++|+++|.||++.+...++.. ...+
T Consensus 180 d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~ 259 (423)
T PRK05964 180 GYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAG 259 (423)
T ss_pred hhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcC
Confidence 2 22222 1 2445666643 3777787664 3899999999999999865443321 1111
Q ss_pred CcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHH------HhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHH
Q 012785 277 HDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKY------IELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFF 350 (456)
Q Consensus 277 ~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~------~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l 350 (456)
...-+.++||.++.+++++|+++++ +++.+.+... ....+++.++++..++.+.|+.+.+. +++
T Consensus 260 v~pDi~~~~K~l~gG~~p~~av~~~-~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~---------~~~ 329 (423)
T PRK05964 260 VSPDIMCLSKGLTGGYLPLAATLCT-AEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDE---------PVL 329 (423)
T ss_pred CCCCeeeeehhhhcCcccceEEEEc-HHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhc---------CHH
Confidence 1122457899998333899999886 9998887532 23356788999999999998865432 344
Q ss_pred HHHHHHHHHHHHHHHHHHHhc---CCccccCCCCcccccccccCCCCCceEEeecCc-----cHHHHHHHHHhCCEEeec
Q 012785 351 EFTNHQMSTRWKQLRMAVQKS---GLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-----EIEDCESFLKGNKILTRS 422 (456)
Q Consensus 351 ~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-----~~~~~~~~l~~~gI~v~p 422 (456)
++.. +.-+.+.+.|+++ +.+.-.+..|. ++.+.+.+ ....+.+.|.++||.+.+
T Consensus 330 ~~~~----~~g~~l~~~l~~l~~~~~i~~vrg~Gl--------------~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~ 391 (423)
T PRK05964 330 ERVA----ALSAGLAEGLEPFRDLPGVADVRVLGA--------------IGAVELDRPVLERDGPALRAFALERGVLLRP 391 (423)
T ss_pred HHHH----HHHHHHHHHHHhhccCCCeEEeecccE--------------EEEEEeccCcchhHHHHHHHHHHHCCeEEEe
Confidence 4444 4444444444443 22211222333 34445532 145677888899999987
Q ss_pred CCCCCCCCCeEEEEec--CChhHHHHHHHHHHhhhC
Q 012785 423 GKHFGFSPKYVRISML--DRDENYNLFVQRLSKILS 456 (456)
Q Consensus 423 g~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l~ 456 (456)
. .+.+|++.. .+++++++++++|+++++
T Consensus 392 ~------~~~lR~~p~l~~t~edId~~v~~l~~al~ 421 (423)
T PRK05964 392 L------GNTIYLMPPYIITAEELDRITDAIVEVAD 421 (423)
T ss_pred c------CCEEEEeCCcccCHHHHHHHHHHHHHHHh
Confidence 2 257999965 599999999999998763
No 242
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.74 E-value=1.8e-16 Score=161.40 Aligned_cols=257 Identities=11% Similarity=0.056 Sum_probs=167.1
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhcCC----------------eEeeecc------
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCVKS----------------RLYKWAG------ 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~g~----------------~~~~~~~------ 220 (456)
+.|+++++++||++.+++.... .|.. +|+..+-+|++....+..... ..++++-
T Consensus 104 ~~v~f~~SGseA~e~AiklAr~~tgr~---~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 180 (445)
T PRK08593 104 KRVTFGLSGSDANDGIIKFARAYTGRP---YIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMY 180 (445)
T ss_pred CEEEECCchHHHHHHHHHHHHHhhCCC---eEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccc
Confidence 5899999999999999986532 2322 799999999997654432211 1112110
Q ss_pred ---Cc-------cccc--------cCCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC-
Q 012785 221 ---DA-------KRFN--------KDGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT- 272 (456)
Q Consensus 221 ---d~-------~~l~--------~~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~- 272 (456)
+. +.++ ..+..+|++...++..|.+.+ ++|+++|+++|.||+|.+.+.++..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~ 260 (445)
T PRK08593 181 EEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWS 260 (445)
T ss_pred cCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHH
Confidence 00 1111 134567777766777787744 3899999999999999865443321
Q ss_pred --C--CCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchh
Q 012785 273 --Y--PADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDEC 348 (456)
Q Consensus 273 --~--~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~ 348 (456)
. .-..+ +.+++|.++ .|+++|+++++ +++++.+.......+++.+++++.++.+.|+.+.+. +
T Consensus 261 a~~~~gv~pD--i~t~gK~l~-~G~p~gav~~~-~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~---------~ 327 (445)
T PRK08593 261 SISHFNITPD--LMSFGKSLA-GGMPMSAIVGR-KEIMESLEAPAHLFTTGANPVSCAAALATIDMIEDE---------S 327 (445)
T ss_pred HHHhcCCCCC--Eeeeccccc-CCcccEEEEEc-HHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhc---------c
Confidence 1 11123 447999998 89999999996 899888764444568889999999999999866442 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC--------c--cHHHHHHHHHhCCE
Q 012785 349 FFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE--------Q--EIEDCESFLKGNKI 418 (456)
Q Consensus 349 ~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~--------~--~~~~~~~~l~~~gI 418 (456)
.+++.++.-+..++.|.+..++++.+.-.+..|.+ +.+.+. . ....+...+.++||
T Consensus 328 l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~--------------~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv 393 (445)
T PRK08593 328 LLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLS--------------IGIDIVSDKKLKTRDNEAALKICNYCFEHGV 393 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceE--------------EEEEEecCCCcCCCcHHHHHHHHHHHHHCCe
Confidence 33444433333344444433334433334444544 233331 1 13456777889999
Q ss_pred EeecCCCCCCCCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 419 LTRSGKHFGFSPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 419 ~v~pg~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
.+.+. ..+.+|++.. .+++++++++++|.+++
T Consensus 394 ~~~~~-----~~~~lr~~p~l~~t~~~id~~~~~l~~~l 427 (445)
T PRK08593 394 VIIAV-----AGNVLRFQPPLVITYEQLDTALNTIEQAF 427 (445)
T ss_pred EEecc-----CCCEEEEECCCccCHHHHHHHHHHHHHHH
Confidence 99763 2467898865 39999999999998875
No 243
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.74 E-value=1.8e-15 Score=150.15 Aligned_cols=271 Identities=13% Similarity=0.067 Sum_probs=180.3
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHh-cCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYAL-SSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l-~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~ 220 (456)
..+++++++++++. +++++++|+++++..++.++ ..+|| +|+++.|+|+.+...+...|++++.++.
T Consensus 20 ~~~~~~~la~~~~~--------~~~~~~~sgt~al~~~l~~l~~~~gd----~vl~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (352)
T cd00616 20 VREFEKAFAEYLGV--------KYAVAVSSGTAALHLALRALGIGPGD----EVIVPSFTFVATANAILLLGATPVFVDI 87 (352)
T ss_pred HHHHHHHHHHHhCC--------CeEEEECCHHHHHHHHHHHcCCCCCC----EEEeCCcchHHHHHHHHHcCCeEEEEec
Confidence 48999999999862 36778889999999999998 57899 9999999999999999999999887655
Q ss_pred Cc-------ccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCC-CCCCCCCCCcEEEecC
Q 012785 221 DA-------KRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQY-TSITYPADHDLMLFTV 284 (456)
Q Consensus 221 d~-------~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~-~~~~~~~~~~i~i~S~ 284 (456)
+. +.++. .++++++++ ||+|...+ ++|+++|+++|+|+++..... .........++.+.||
T Consensus 88 ~~~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~ 164 (352)
T cd00616 88 DPDTYNIDPELIEAAITPRTKAIIPV---HLYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSF 164 (352)
T ss_pred CCCcCCcCHHHHHHhcCcCCeEEEEE---CCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcC
Confidence 43 33332 357888775 47897765 378999999999999974221 1110111135778887
Q ss_pred c--cccCCCCceEEEEEEeCHHHHHHHHHHHhhc---------------cCcCChHHHHHHHHHHHhhhCCCCCCCCcch
Q 012785 285 S--KSTGHAGTRIGWALVKDMEVAKKMTKYIELN---------------TIGVSKDSQLRAAKVLKVVSDSCKPSGSEDE 347 (456)
Q Consensus 285 S--K~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~---------------~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~ 347 (456)
+ |.+ ++-+.|+++.+++++.++++...... ..+.+.+...++...+
T Consensus 165 ~~~K~~--~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l--------------- 227 (352)
T cd00616 165 HPTKNL--TTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQL--------------- 227 (352)
T ss_pred CCCCCC--cccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHH---------------
Confidence 7 876 34457999887678888877654321 1123333333222222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC----ccHHHHHHHHHhCCEEeecC
Q 012785 348 CFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE----QEIEDCESFLKGNKILTRSG 423 (456)
Q Consensus 348 ~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~----~~~~~~~~~l~~~gI~v~pg 423 (456)
+.++...++.+++.+.+.+.|++++++.+..+.... ......+.+.++ .+.+.+.+.|+++||.+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~ 299 (352)
T cd00616 228 EKLDEIIARRREIAERYKELLADLPGIRLPDVPPGV--------KHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVH 299 (352)
T ss_pred HhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCC--------ceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeee
Confidence 234556667778888888989887666655432210 000012333444 25678888999999976521
Q ss_pred CCCCC----------------------CCCeEEEEecC--ChhHHHHHHHHHH
Q 012785 424 KHFGF----------------------SPKYVRISMLD--RDENYNLFVQRLS 452 (456)
Q Consensus 424 ~~fg~----------------------~~~~iRis~~~--~~e~i~~~l~~L~ 452 (456)
-.-.. ..+.+|+++.. ++++++.+++.|+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 300 YPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred cCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 10000 02689999874 8999999988874
No 244
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.74 E-value=7.9e-16 Score=151.13 Aligned_cols=270 Identities=13% Similarity=0.166 Sum_probs=189.2
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc-
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG- 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~- 220 (456)
..+|++.+|+|++. ++-+++++|- .++..++.+|++++| .|+...-.+......++..+++.+.|.-
T Consensus 86 h~~LE~~lA~f~g~-------e~al~f~SGy-~AN~~~i~~l~~~~d----li~~D~lnHASiidG~rls~a~~~~f~Hn 153 (388)
T COG0156 86 HVELEEELADFLGA-------EAALLFSSGF-VANLGLLSALLKKGD----LIFSDELNHASIIDGIRLSRAEVRRFKHN 153 (388)
T ss_pred HHHHHHHHHHHhCC-------CcEEEEcccc-hhHHHHHHHhcCCCc----EEEEechhhhhHHHHHHhCCCcEEEecCC
Confidence 58999999999984 4455555554 777888899999999 9999999999999999999999988874
Q ss_pred Ccccccc-------C--CCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCC----CCCCCCC-----CCCCC
Q 012785 221 DAKRFNK-------D--GPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYW----PQYTSIT-----YPADH 277 (456)
Q Consensus 221 d~~~l~~-------~--~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~----~~~~~~~-----~~~~~ 277 (456)
|.+.++. . +.++|++..--.-.|.+.+ +++++|+.++++||+|.- +.-.++. ...+.
T Consensus 154 D~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~v 233 (388)
T COG0156 154 DLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEV 233 (388)
T ss_pred CHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccc
Confidence 5555532 1 2366666655555666544 378999999999999972 3223322 12345
Q ss_pred cEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHh-h-ccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHH
Q 012785 278 DLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIE-L-NTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNH 355 (456)
Q Consensus 278 ~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~-~-~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~ 355 (456)
+|.++||||+||..| ||+.++ ..+++.+.+... . .+.+.+|....++.+.|+.+.+. ...++
T Consensus 234 di~~gTlsKAlGs~G---g~v~g~-~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~------------~~~r~ 297 (388)
T COG0156 234 DIIVGTLGKALGSSG---GYIAGS-AALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEG------------PERRE 297 (388)
T ss_pred eEEEEEchhhhcccC---ceeeCc-HHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhC------------HHHHH
Confidence 899999999999888 999996 999998887633 2 23445566556677777754433 34677
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCC--CCCC
Q 012785 356 QMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFG--FSPK 431 (456)
Q Consensus 356 ~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg--~~~~ 431 (456)
+++++...+.+.++..+. ...+ +....+.+-+.+ ....+...|++.||.+.+...-- .+..
T Consensus 298 ~L~~~~~~~~~~~~~~~~-~~~~--------------s~s~I~pv~~gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gta 362 (388)
T COG0156 298 RLQELAAFFRSLLKALGL-VLLP--------------SESPIIPVILGDEERALEASRALLEEGIYVSAIRPPTVPKGTA 362 (388)
T ss_pred HHHHHHHHHHHHHHhcCC-ccCC--------------CCCCeeeeEeCCHHHHHHHHHHHHHCCeeEeeecCCCCCCCcc
Confidence 777777777766665442 2211 111134444433 34556666777799998744221 2457
Q ss_pred eEEEEecC--ChhHHHHHHHHHHhh
Q 012785 432 YVRISMLD--RDENYNLFVQRLSKI 454 (456)
Q Consensus 432 ~iRis~~~--~~e~i~~~l~~L~~~ 454 (456)
.+|++++. ++++|+.+++.|.++
T Consensus 363 rlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 363 RLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred eEEEEecCCCCHHHHHHHHHHHHhh
Confidence 89999875 899999999999875
No 245
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.74 E-value=2.8e-16 Score=160.11 Aligned_cols=254 Identities=13% Similarity=0.096 Sum_probs=168.1
Q ss_pred ceEEEccCHHHHHHHHHHHhcCC----CCCCCcEEEEeCCCCCChhhhhhhcCCe---------------EeeeccCccc
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQ----DASEPISVVSAAPYYSSYPSITDCVKSR---------------LYKWAGDAKR 224 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~----gd~~~~~Vlv~~P~y~~~~~~~~~~g~~---------------~~~~~~d~~~ 224 (456)
+.++++++++||++.+++..... |.. +|+...-+|++....+...... .++++ |.+.
T Consensus 142 ~~v~f~~SGsEAve~AlklAr~~t~~~gr~---~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~-d~~~ 217 (459)
T PRK11522 142 KYSFFCNSGTESVEAALKLAKAYQSPRGKF---TFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFG-NIEA 217 (459)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHhccCCCc---EEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCC-CHHH
Confidence 58999999999999999876432 221 7999999999987655433211 11221 3333
Q ss_pred ccc---------CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC-----CCCCCcEEE
Q 012785 225 FNK---------DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT-----YPADHDLML 281 (456)
Q Consensus 225 l~~---------~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~-----~~~~~~i~i 281 (456)
++. .+..++++...+.-.|...+ ++|+++|+++|.||++.+.+.++-. ..-..+|+
T Consensus 218 l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv- 296 (459)
T PRK11522 218 MRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDIL- 296 (459)
T ss_pred HHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEE-
Confidence 221 23456666555665676654 3899999999999999865444321 01123443
Q ss_pred ecCccccCCCC-ceEEEEEEeCHHHHHHHHH--HHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHH
Q 012785 282 FTVSKSTGHAG-TRIGWALVKDMEVAKKMTK--YIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMS 358 (456)
Q Consensus 282 ~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~--~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~ 358 (456)
+|+|.+| .| +.+|.+++. +++.+.+.. .....+++.++++..++.+.|+.+.+. + ..++++
T Consensus 297 -t~gK~lg-gG~~Pigav~~~-~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~---------~----l~~~~~ 360 (459)
T PRK11522 297 -CLAKALG-GGVMPIGATIAT-EEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQ---------N----LPAQAE 360 (459)
T ss_pred -Eechhhh-CCCccceeEEEc-HHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcc---------h----HHHHHH
Confidence 8999998 78 699999996 888877642 234578889999999999999976543 2 334455
Q ss_pred HHHHHHHHHHHhc----C-CccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCCCCCC
Q 012785 359 TRWKQLRMAVQKS----G-LFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFGFSPK 431 (456)
Q Consensus 359 ~~~~~l~~~L~~~----~-~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg~~~~ 431 (456)
++-+++.+.|+++ + .+.-.+..|. ++.+.+.. ....+...+.++||.+.+.. ...+
T Consensus 361 ~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl--------------~~giel~~~~~~~~i~~~l~~~Gvl~~~~~---~~~~ 423 (459)
T PRK11522 361 QKGDYLLDGFRQLAREYPDLVQEARGKGM--------------LMAIEFVDNEIGYNFASEMFRQRVLVAGTL---NNAK 423 (459)
T ss_pred HHHHHHHHHHHHHHHhCCCceeeEEecee--------------EEEEEecCchHHHHHHHHHHHCCeEEEecC---CCCC
Confidence 5555555555543 2 1222223333 45566643 24567788889999997632 2357
Q ss_pred eEEEEec--CChhHHHHHHHHHHhhh
Q 012785 432 YVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 432 ~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
.+|+..+ .+++++++++++|.+++
T Consensus 424 ~lr~~Ppl~~t~~~id~~l~~l~~~l 449 (459)
T PRK11522 424 TIRIEPPLTLTIEQCEQVLKAARKAL 449 (459)
T ss_pred EEEEECCccCCHHHHHHHHHHHHHHH
Confidence 8998865 39999999999998875
No 246
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.74 E-value=8.1e-16 Score=154.48 Aligned_cols=266 Identities=15% Similarity=0.135 Sum_probs=173.5
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhc--------------CCCCCCCcEEEEeCCCCCChhhh
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALS--------------SQDASEPISVVSAAPYYSSYPSI 207 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~--------------~~gd~~~~~Vlv~~P~y~~~~~~ 207 (456)
..+|++++|++++. + ..++.+.+..+...++.+|. ..++ .|+...-.+......
T Consensus 149 h~~LE~~LA~f~g~-------e-~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d----~i~~D~~~HaSI~dG 216 (476)
T PLN02955 149 HRLLESSLADLKKK-------E-DCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKV----AIFSDALNHASIIDG 216 (476)
T ss_pred HHHHHHHHHHHHCC-------C-cEEEECChHHHHHHHHHHHhhccccccccccccCCCCc----EEEEeccchHHHHHH
Confidence 37899999999974 3 45555555677667777762 3444 677777777777778
Q ss_pred hhhc----CCeEeeecc-Ccccccc------CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCC----CC
Q 012785 208 TDCV----KSRLYKWAG-DAKRFNK------DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYW----PQ 267 (456)
Q Consensus 208 ~~~~----g~~~~~~~~-d~~~l~~------~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~----~~ 267 (456)
++.. +++++.|+. |.+.++. .+.++|++..--+++|.+.+ ++|+++|+++|+||++.. +.
T Consensus 217 ~~ls~~~~~a~~~~f~HND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~ 296 (476)
T PLN02955 217 VRLAERQGNVEVFVYRHCDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGEN 296 (476)
T ss_pred HHhccccCCceEEEeCCCCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCC
Confidence 7776 467766664 6665542 13356665555788998866 388999999999999983 21
Q ss_pred CCCCC----CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCc--CChHHHHHHHHHHHhhhCCCCC
Q 012785 268 YTSIT----YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIG--VSKDSQLRAAKVLKVVSDSCKP 341 (456)
Q Consensus 268 ~~~~~----~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~--~s~~~q~~a~~~L~~~~~~~~~ 341 (456)
..+.. ...+.+|+++||||.+|..| ||++++ +++++.++.......++ .++....++.+.++.+...
T Consensus 297 G~G~~e~~g~~~di~ii~~TLsKA~G~~G---Gfi~gs-~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~--- 369 (476)
T PLN02955 297 GGGVAEEFNCEADVDLCVGTLSKAAGCHG---GFIACS-KKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKE--- 369 (476)
T ss_pred CCcHHHHhCCCCCCcEEEEeCccchhccC---ceeecH-HHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcC---
Confidence 12221 23577899999999988666 999996 88888888664432222 3333344444555533221
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEee
Q 012785 342 SGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTR 421 (456)
Q Consensus 342 ~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~ 421 (456)
...+++++++.+++++.+ + +.+. ... -.+++.-+.....+.+.|.++||.+.
T Consensus 370 ---------~~~r~~L~~n~~~fr~~~---G-~~~~---sPI------------~pI~ig~~~~a~~~~~~L~~~Gi~v~ 421 (476)
T PLN02955 370 ---------KWRRKAIWERVKEFKALS---G-VDIS---SPI------------ISLVVGNQEKALKASRYLLKSGFHVM 421 (476)
T ss_pred ---------HHHHHHHHHHHHHHHHhc---C-CCCC---CCE------------EEEEeCCHHHHHHHHHHHHHCCCEEE
Confidence 135566777777776631 2 2221 111 01333323345667889999999998
Q ss_pred cCCCCCC---CCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 422 SGKHFGF---SPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 422 pg~~fg~---~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
+-. |.. +...+||+++. ++|+++++++.|.++.
T Consensus 422 ~i~-yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~ 459 (476)
T PLN02955 422 AIR-PPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCL 459 (476)
T ss_pred EEC-CCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHH
Confidence 733 332 34579999975 8999999999998865
No 247
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.73 E-value=7.2e-16 Score=148.98 Aligned_cols=280 Identities=15% Similarity=0.136 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHh--cCCCCCCCcEEEEeCCCCCChhhhhhhc---CCeEee
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYAL--SSQDASEPISVVSAAPYYSSYPSITDCV---KSRLYK 217 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l--~~~gd~~~~~Vlv~~P~y~~~~~~~~~~---g~~~~~ 217 (456)
.+.|+.||+.++. ++++|++|+|+||+.++++... .......+.+|+++.--++.....++.+ |.++..
T Consensus 47 e~AR~~iA~llga------~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vty 120 (386)
T COG1104 47 EEAREQIAKLLGA------DPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTY 120 (386)
T ss_pred HHHHHHHHHHhCC------CCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEE
Confidence 5677888888875 5689999999999999999873 2221111228999998998888888887 888888
Q ss_pred eccCcccc------cc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcEEEe
Q 012785 218 WAGDAKRF------NK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHDLMLF 282 (456)
Q Consensus 218 ~~~d~~~l------~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i~i~ 282 (456)
.++|.+++ +. +++.+|-+...||.||++.+ ++|+++++++.+|.++.- +..++. ....-++...
T Consensus 121 l~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~-Gkipi~~~~~~vD~ls~ 199 (386)
T COG1104 121 LPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAV-GKIPIDLEELGVDLLSF 199 (386)
T ss_pred eCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhc-CceeccccccCcceEEe
Confidence 77775554 22 35677777788999999988 489999999999998873 223332 1223467778
Q ss_pred cCccccCCCCceEEEEEEeCHHHH-HHHHH------HHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHH
Q 012785 283 TVSKSTGHAGTRIGWALVKDMEVA-KKMTK------YIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNH 355 (456)
Q Consensus 283 S~SK~~g~~G~RiG~l~~~~~~~~-~~l~~------~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~ 355 (456)
|-.|..|..| +|.+++. +.+. ..+.. ..+..|.++ +...+..++++. ..+.++....
T Consensus 200 SaHK~~GpkG--iGaLyv~-~~~~~~p~i~GGgQE~g~RsGTenv--~~Ivg~~~A~~~-----------a~~~~~~~~~ 263 (386)
T COG1104 200 SAHKFGGPKG--IGALYVR-PGVRLEPLIHGGGQERGLRSGTENV--PGIVGFGKAAEI-----------AVEELEEENA 263 (386)
T ss_pred ehhhccCCCc--eEEEEEC-CCCccCceeccCcCCCCCCCCCccH--HHHHHHHHHHHH-----------HHHHHHHHHH
Confidence 8889999888 8999885 3221 11111 111123333 333333444442 1455667788
Q ss_pred HHHHHHHHHHHHHHhc-CCccccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhCCEEeecCCCCCCC----
Q 012785 356 QMSTRWKQLRMAVQKS-GLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGNKILTRSGKHFGFS---- 429 (456)
Q Consensus 356 ~~~~~~~~l~~~L~~~-~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~gI~v~pg~~fg~~---- 429 (456)
+++..|+.+.+.|.+. +.+.+..... +.-++.+.+.++. ..+.+...|..+||.+..|+.|..+
T Consensus 264 ~~~~lr~~l~~~l~~~~p~~~~~g~~~----------~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS~~~~p 333 (386)
T COG1104 264 RLRKLRDRLEDGLLEIIPDVYLNGDDE----------PRLPNILNFSFPGVEGESLLLALDLAGIAVSTGSACSSGSLEP 333 (386)
T ss_pred HHHHHHHHHHHHHHhcCCcEEEcCCcc----------cCCCCeEEEEeCCCcHHHHHHhccccCeEEeccccccCCCCCc
Confidence 8889999999999875 5544433211 1122344555554 5778888999999999999998421
Q ss_pred --------------CCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 430 --------------PKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 430 --------------~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
.+.|||||+. ++++++.+++.|++++
T Consensus 334 ShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i 375 (386)
T COG1104 334 SHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEII 375 (386)
T ss_pred cHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 3689999986 8899999999998875
No 248
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=3.1e-15 Score=151.38 Aligned_cols=146 Identities=16% Similarity=0.192 Sum_probs=117.2
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhh----hhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSIT----DCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~----~~~g~~~~~ 217 (456)
..+|++.+|++.+. +..++|+++++|+++++.++.++|| +|+++...|......+ ...|+++..
T Consensus 66 ~~~le~~lA~l~g~--------~~av~~sSGt~Al~~al~~ll~~Gd----~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~ 133 (433)
T PRK08134 66 VAVLEERVAALEGG--------VGAIATASGQAALHLAIATLMGAGS----HIVASSALYGGSHNLLHYTLRRFGIETTF 133 (433)
T ss_pred HHHHHHHHHHHhCC--------CcEEEeCCHHHHHHHHHHHHhCCCC----EEEEeCCccHHHHHHHHHHHhhCCeEEEE
Confidence 47899999998863 3578899999999999999999999 9999999998765544 447888887
Q ss_pred ecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCcccc
Q 012785 218 WAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKST 288 (456)
Q Consensus 218 ~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~ 288 (456)
++. |.+.++. .++++|++.+|+||+|.+.+ ++|+++|+++|+|.++..+.. ..+...+-++++.|.+|.+
T Consensus 134 vd~~d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~-~~pl~~GaD~vv~S~tK~l 212 (433)
T PRK08134 134 VKPGDIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYL-LRPFEHGADLVYHSATKFL 212 (433)
T ss_pred ECCCCHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCccccc-CCchhcCCCEEEecccccc
Confidence 765 4555543 47899999999999999977 488999999999999875432 2223446689999999999
Q ss_pred CCCCceEEEEEE
Q 012785 289 GHAGTRIGWALV 300 (456)
Q Consensus 289 g~~G~RiG~l~~ 300 (456)
|.+|..+|.+++
T Consensus 213 ~g~g~~~gG~v~ 224 (433)
T PRK08134 213 GGHGTAIGGVLV 224 (433)
T ss_pred CCCCCceEEEEE
Confidence 888888888766
No 249
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.72 E-value=1.2e-15 Score=151.48 Aligned_cols=283 Identities=15% Similarity=0.170 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhh----cCCeEeee
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDC----VKSRLYKW 218 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~----~g~~~~~~ 218 (456)
..|++.|+++.+ .+.++++++++.|+..++.+++++|| +|++....|.+....++. .|+++..+
T Consensus 58 ~~le~~la~Le~--------g~~a~~~~SGmaAi~~~l~~ll~~Gd----~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~ 125 (386)
T PF01053_consen 58 RALEQRLAALEG--------GEDALLFSSGMAAISAALLALLKPGD----HIVASDDLYGGTYRLLEELLPRFGVEVTFV 125 (386)
T ss_dssp HHHHHHHHHHHT---------SEEEEESSHHHHHHHHHHHHS-TTB----EEEEESSSSHHHHHHHHHCHHHTTSEEEEE
T ss_pred HHHHHHHHHhhc--------ccceeeccchHHHHHHHHHhhcccCC----ceEecCCccCcchhhhhhhhcccCcEEEEe
Confidence 577778877764 35788899999999999999999999 999999999987766654 58887776
Q ss_pred cc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcC-cEEEeeecCCCC-CCCCCCCCCCCcEEEecCccc
Q 012785 219 AG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSG-GILVHDLAYYWP-QYTSITYPADHDLMLFTVSKS 287 (456)
Q Consensus 219 ~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~-~~iI~De~y~~~-~~~~~~~~~~~~i~i~S~SK~ 287 (456)
+. |.+.++. .++++|++.+|.||+..+.+ ++++++| +++|+|+.+..| ...|+ ..+-+|++.|.+|.
T Consensus 126 d~~d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~pL--~~GaDivv~S~TKy 203 (386)
T PF01053_consen 126 DPTDLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQNPL--ELGADIVVHSATKY 203 (386)
T ss_dssp STTSHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC-GG--GGT-SEEEEETTTT
T ss_pred CchhHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceeeeccC--cCCceEEEeecccc
Confidence 65 5566643 47899999999999999877 4788998 999999998754 22333 33568999999999
Q ss_pred cC-CCCceEEEEEEeC-HHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHH
Q 012785 288 TG-HAGTRIGWALVKD-MEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLR 365 (456)
Q Consensus 288 ~g-~~G~RiG~l~~~~-~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ 365 (456)
++ +..+=.|.+++++ +++.++++..........++.....+..-|+ .+.-..++..++...+.
T Consensus 204 l~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~---------------Tl~~R~~~~~~nA~~lA 268 (386)
T PF01053_consen 204 LSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLR---------------TLPLRMERQNENAEALA 268 (386)
T ss_dssp TTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHT---------------THHHHHHHHHHHHHHHH
T ss_pred ccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCC---------------cHHHHHHHHHHHHHHHH
Confidence 84 5556678888765 5888888888776777778877777777665 24445666778888899
Q ss_pred HHHHhcCCcc-ccCCC---CcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEE---eecCCC-------------
Q 012785 366 MAVQKSGLFS-VPELP---SQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKIL---TRSGKH------------- 425 (456)
Q Consensus 366 ~~L~~~~~~~-~~~~~---g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~---v~pg~~------------- 425 (456)
+.|++++.+. +..|. -..+...++.....+..+.+++++..+.+.+.+..-.+. +.-|..
T Consensus 269 ~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~ 348 (386)
T PF01053_consen 269 EFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKLFSIAPSLGGVESLISHPASTSHR 348 (386)
T ss_dssp HHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTT
T ss_pred HHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhhHhhhhhcCCcccccccccchhhc
Confidence 9999987654 22220 000111112222333356777775544555555444432 111111
Q ss_pred ---------CCCCCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 426 ---------FGFSPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 426 ---------fg~~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
.|..++.||+|++ -|+.+.+++.|++.|+
T Consensus 349 ~~~~e~~~~~Gi~~~liRlSvG--lEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 349 SLSPEERAEAGISDGLIRLSVG--LEDPDDLIADLEQALE 386 (386)
T ss_dssp TSCHHHHHHTTS-TTEEEEE----SS-HHHHHHHHHHHHH
T ss_pred cCChhhhhccCCCCCeeEEEec--cCCHHHHHHHHHHhcC
Confidence 1113578999985 4456777777777663
No 250
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.72 E-value=6.7e-16 Score=155.09 Aligned_cols=268 Identities=13% Similarity=0.084 Sum_probs=172.1
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcC------CCCCCCcEEEEeCCCCCChhhhhhhcCC-eE
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSS------QDASEPISVVSAAPYYSSYPSITDCVKS-RL 215 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~------~gd~~~~~Vlv~~P~y~~~~~~~~~~g~-~~ 215 (456)
.+++..+++.+... ...+.+++++++++|++.+++.+.. ++.. +|+..+.+|++....+..... ..
T Consensus 77 ~~~~~~la~~l~~~----~~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~---~ii~~~~~yHG~t~~~~~~s~~~~ 149 (395)
T PRK03715 77 NEPMAKLAGLLTQH----SCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAY---EIITFDHSFHGRTLATMSASGKPG 149 (395)
T ss_pred CHHHHHHHHHHhhc----cCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCc---EEEEECCCcCCChHHHHhhcCCcc
Confidence 45667778877532 1235899999999999999998852 2221 799999999987654443321 10
Q ss_pred ---------eeec----cCcccccc---CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCC
Q 012785 216 ---------YKWA----GDAKRFNK---DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTS 270 (456)
Q Consensus 216 ---------~~~~----~d~~~l~~---~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~ 270 (456)
..+. .|.+.++. +++.++++...++..|...+ ++|+++|+++|.||++.+.+.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG 229 (395)
T PRK03715 150 WDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTG 229 (395)
T ss_pred cccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCc
Confidence 0111 13344432 35667777655666666643 27999999999999998654443
Q ss_pred CC---C--CCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCc
Q 012785 271 IT---Y--PADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSE 345 (456)
Q Consensus 271 ~~---~--~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~ 345 (456)
-. . .-..+ +.+|+|.+| .|+.+|.++++ +++.. +.......+++.++++..++.+.|+.+.+.
T Consensus 230 ~~~a~~~~gv~PD--i~t~gK~lg-~G~p~~av~~~-~~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l~~~------- 297 (395)
T PRK03715 230 TLFAYELSGIEPD--IMTLGKGIG-GGVPLAALLAK-AEVAV-FEAGDQGGTYNGNPLMTAVGVAVISQLLAP------- 297 (395)
T ss_pred chhhHhhcCCCCc--eeeehhhhh-CCcceEEEEEc-ccccc-ccCCCcCCCCCCCHHHHHHHHHHHHHHHhc-------
Confidence 21 1 11223 468899999 78999999986 77652 222223457788999999999999876432
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhc----CCccccCCCCcccccccccCCCCCceEEeecCcc-HHHHHHHHHhC---C
Q 012785 346 DECFFEFTNHQMSTRWKQLRMAVQKS----GLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQE-IEDCESFLKGN---K 417 (456)
Q Consensus 346 ~~~~l~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~-~~~~~~~l~~~---g 417 (456)
+ .+++++++.+.+.+.|+++ + +...+..|. ++-+.+.++ ...+.+.+.+. |
T Consensus 298 --~----l~~~~~~~g~~l~~~L~~l~~~~~-i~~vrG~Gl--------------m~~i~l~~~~~~~~~~~~~~~~~~G 356 (395)
T PRK03715 298 --G----FLEGVRARGEYLKEKLLELSEERG-LEGERGEGL--------------LRALLLGKDIGPQIVEKARDMQPDG 356 (395)
T ss_pred --c----HHHHHHHHHHHHHHHHHHHhhcCC-cCeEEccee--------------EEEEEecCchHHHHHHHHHhccCCC
Confidence 2 3444555555555555542 3 222233333 355555432 34555555555 9
Q ss_pred EEeecCCCCCCCCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 418 ILTRSGKHFGFSPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 418 I~v~pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
|.+.+. ..+.+|++... +++++++++++|++++
T Consensus 357 i~~~~~-----~~~~lR~~p~l~~t~~ei~~~~~~l~~~l 391 (395)
T PRK03715 357 LLLNAP-----RPNLLRFMPALNVTTEEIDQMIAMLRSVL 391 (395)
T ss_pred EEEeec-----CCCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 998752 24689999763 8999999999999876
No 251
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.72 E-value=5.7e-15 Score=148.22 Aligned_cols=273 Identities=12% Similarity=0.064 Sum_probs=177.1
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHh-cCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYAL-SSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l-~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~ 220 (456)
..+|+++++++++. ++.++++|+++++.+++.++ .++|| +|+++.|+|..+...+...|++++.+++
T Consensus 31 ~~~le~~la~~~g~--------~~~v~~~sgt~al~~~l~al~~~~Gd----~Viv~~~~~~~~~~~~~~~G~~~~~~~~ 98 (380)
T TIGR03588 31 VPAFEEALAEYVGA--------KYAVAFNSATSALHIACLALGVGPGD----RVWTTPITFVATANCALYCGAKVDFVDI 98 (380)
T ss_pred HHHHHHHHHHHHCC--------CeEEEEcCHHHHHHHHHHHcCCCCCC----EEEeCCcchHHHHHHHHHcCCEEEEEec
Confidence 38999999999974 24566678899999999998 78999 9999999999999999999999987765
Q ss_pred Cc-------cccc---c----CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC-CCCCCCCC--CCc
Q 012785 221 DA-------KRFN---K----DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ-YTSITYPA--DHD 278 (456)
Q Consensus 221 d~-------~~l~---~----~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~-~~~~~~~~--~~~ 278 (456)
|. +.++ . .++++|++ .||+|...+ ++|+++|+++|+|+++.... +...+... ..+
T Consensus 99 ~~~~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d 175 (380)
T TIGR03588 99 DPDTGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYAD 175 (380)
T ss_pred CCCcCCcCHHHHHHHhhcccCCCceEEEE---eCCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccc
Confidence 43 2222 1 35677775 456887754 38899999999999998432 22211111 237
Q ss_pred EEEecCc--cccCCCCceEEEEEEeCHHHHHHHHHHHhhcc-------------------------CcCChHHHHHHHHH
Q 012785 279 LMLFTVS--KSTGHAGTRIGWALVKDMEVAKKMTKYIELNT-------------------------IGVSKDSQLRAAKV 331 (456)
Q Consensus 279 i~i~S~S--K~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~-------------------------~~~s~~~q~~a~~~ 331 (456)
+.+.||+ |.++. | ..|+++..++++.++++..+.... ...+.+....+..-
T Consensus 176 ~~~~S~~~~K~~~~-~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~q 253 (380)
T TIGR03588 176 ATVFSFHPVKIITT-A-EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQ 253 (380)
T ss_pred eEEEecCCCCcccc-c-CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHH
Confidence 8888876 77753 3 578888888889888876543110 11122222222222
Q ss_pred HHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCC-CCcccccccccCCCCCceEEeecC----ccH
Q 012785 332 LKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPEL-PSQFCTFLGRAFEPQPAFAWLKCE----QEI 406 (456)
Q Consensus 332 L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~g~~~~~~~~~~~~~~~f~~~~~~----~~~ 406 (456)
|+ .+++..++-+++.+.+.+.|++++.+....+ .+...++ .+..+.++ .+.
T Consensus 254 L~---------------~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~---------~~~~i~~~~~~~~~r 309 (380)
T TIGR03588 254 LK---------------KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAW---------HLYPILLDQEFGCTR 309 (380)
T ss_pred HH---------------HHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEE---------EEEEEEECCcCCCCH
Confidence 22 2344555556666677777877665443322 1111100 01222332 256
Q ss_pred HHHHHHHHhCCEEeecCCC-------C----CC---------CCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 407 EDCESFLKGNKILTRSGKH-------F----GF---------SPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 407 ~~~~~~l~~~gI~v~pg~~-------f----g~---------~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
+.+.+.|.++||.++.... | .. ..+.+++.+.. ++++++..++.|+++|
T Consensus 310 ~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 310 KEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred HHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 7888899999998874321 0 00 12568887653 8999999999999875
No 252
>PRK06541 hypothetical protein; Provisional
Probab=99.72 E-value=7.3e-16 Score=157.41 Aligned_cols=257 Identities=14% Similarity=0.107 Sum_probs=167.4
Q ss_pred ceEEEccCHHHHHHHHHHHhcCC----CCCCCcEEEEeCCCCCChhhhhhhcC---------------CeEeeec-----
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQ----DASEPISVVSAAPYYSSYPSITDCVK---------------SRLYKWA----- 219 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~----gd~~~~~Vlv~~P~y~~~~~~~~~~g---------------~~~~~~~----- 219 (456)
+.+++++++++|++.+++..... |.....+|+...-+|++....+.... ...++.+
T Consensus 113 ~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 192 (460)
T PRK06541 113 NRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRA 192 (460)
T ss_pred CEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccc
Confidence 58999999999999999876431 21001189999999998876544321 1111111
Q ss_pred ----cCc--------cccc-------cCCCeEEEEcCC-CCCCcccch---------HHhhhcCcEEEeeecCCCCCCCC
Q 012785 220 ----GDA--------KRFN-------KDGPYIELVTSP-NNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTS 270 (456)
Q Consensus 220 ----~d~--------~~l~-------~~~~~~i~v~~P-~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~ 270 (456)
.|. +.++ ..+..+|++ .| ++++|.+.+ ++|+++|+++|.||+|.+.+.++
T Consensus 193 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~-EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G 271 (460)
T PRK06541 193 PELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFL-EPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLG 271 (460)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEE-CCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc
Confidence 111 1221 123344554 55 899998765 38999999999999997654333
Q ss_pred CC-----CCCCCcEEEecCccccCCCCc-eEEEEEEeCHHHHHHHHHH----HhhccCcCChHHHHHHHHHHHhhhCCCC
Q 012785 271 IT-----YPADHDLMLFTVSKSTGHAGT-RIGWALVKDMEVAKKMTKY----IELNTIGVSKDSQLRAAKVLKVVSDSCK 340 (456)
Q Consensus 271 ~~-----~~~~~~i~i~S~SK~~g~~G~-RiG~l~~~~~~~~~~l~~~----~~~~~~~~s~~~q~~a~~~L~~~~~~~~ 340 (456)
.. ..-..+++ +|||.++ .|+ ++|+++++ +++++.+... ....+++.++++..++.+.|+.+.+.
T Consensus 272 ~~~a~~~~gv~PDiv--t~gK~l~-~G~~pigav~~~-~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~-- 345 (460)
T PRK06541 272 EMFGCERFGYVPDII--TCAKGIT-SGYSPLGAMIAS-DRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFERE-- 345 (460)
T ss_pred hhhhhhhcCCCCCEE--Eeccccc-CCccceeEEEEc-HHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc--
Confidence 21 01122343 6999999 897 99999997 8888877532 12358888999999999998865432
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcC---CccccCCCCcccccccccCCCCCceEEeecCc----------c--
Q 012785 341 PSGSEDECFFEFTNHQMSTRWKQLRMAVQKSG---LFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----------E-- 405 (456)
Q Consensus 341 ~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----------~-- 405 (456)
...++++++.+++.+.|+++. .+...+..|.+ .-+.+.. .
T Consensus 346 -----------~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~--------------~~ie~~~~~~~~~~~~~~~~ 400 (460)
T PRK06541 346 -----------GLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYF--------------YGIELVKDKATKETFTDDES 400 (460)
T ss_pred -----------cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceE--------------EEEEEecCcccccCCcchhh
Confidence 245666777777777776652 22223344544 3333310 0
Q ss_pred ---H-HHHHHHHHhCCEEeecCCCCCCCCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 406 ---I-EDCESFLKGNKILTRSGKHFGFSPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 406 ---~-~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
. ..+...+.++||.+.+.. .+.+.+||+.. .+++++++++++|.+.+
T Consensus 401 ~~~~~~~~~~~l~~~Gi~~~~~~---~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l 453 (460)
T PRK06541 401 ERLLRGFLSPALFEAGLYCRADD---RGDPVVQLAPPLISGQEEFDEIEQILRSVL 453 (460)
T ss_pred hhhHHHHHHHHHHhCCeEEEecC---CCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 0 245567789999998721 13578999976 59999999999998876
No 253
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.72 E-value=9.1e-17 Score=149.17 Aligned_cols=335 Identities=17% Similarity=0.154 Sum_probs=221.6
Q ss_pred ccccccchhhhcCCCCeEEecCCC-------CCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHH
Q 012785 80 SSLTSTDIQSQDGGERIINVDHGD-------PTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRL 152 (456)
Q Consensus 80 ~~~~~~~~~~~~~~~~~i~l~~g~-------p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~ 152 (456)
++.-.++..........|||+.|. |... | .+.+++. +....+. .-.|.+..|+ +|+.+..+++
T Consensus 38 pILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL-~-~VrkAE~-ql~~~~l--dKEYlpI~Gl-----~eF~k~sakL 107 (427)
T KOG1411|consen 38 PILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVL-P-SVRKAEQ-QLASLSL--DKEYLPITGL-----AEFNKLSAKL 107 (427)
T ss_pred CcccHHHHHhcCCCcceeeecccceecCCCCeeee-H-HHHHHHH-HHhhhcc--cchhccccch-----HHHHHHHHHH
Confidence 333334332234445679999994 2222 2 2332222 1111222 2369999995 9999999999
Q ss_pred HHHhcCccCCCceEE--EccCHHHHHHHHHHHh--cCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeec--------c
Q 012785 153 HKVVGNAITENHHIV--VGTGSTQLFQAALYAL--SSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWA--------G 220 (456)
Q Consensus 153 ~~~~g~~~~~~~~I~--~t~G~~~al~~~~~~l--~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~--------~ 220 (456)
.-..+.+...+++|+ -|-++|.++.+....| .-++. .|++++|+|.+...++..+|+.+..+. +
T Consensus 108 a~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~----~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gl 183 (427)
T KOG1411|consen 108 ALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSR----DIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGL 183 (427)
T ss_pred hhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhcccc----ceeecCCcccccCccccccCcceeeeeecccccccc
Confidence 743344444455654 3556667777666655 33555 899999999999999999998874322 3
Q ss_pred Ccccccc------CCCeEEEEcCCCCCCcccchH--------HhhhcCcEEEeeecCCCCCCCCC----------CCCCC
Q 012785 221 DAKRFNK------DGPYIELVTSPNNPDGSVRQS--------VVNRSGGILVHDLAYYWPQYTSI----------TYPAD 276 (456)
Q Consensus 221 d~~~l~~------~~~~~i~v~~P~NPtG~~~~~--------l~~~~~~~iI~De~y~~~~~~~~----------~~~~~ 276 (456)
|.+++-. .+..+++..+.|||||+..+. +.++.+.+.+.|.+|.++.--.+ .....
T Consensus 184 d~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~ 263 (427)
T KOG1411|consen 184 DFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGH 263 (427)
T ss_pred chHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCC
Confidence 5555421 244566667789999998772 56789999999999996422111 12345
Q ss_pred CcEEEecCccccCCCCceEEEE--EEeCHHHHH----HHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHH
Q 012785 277 HDLMLFTVSKSTGHAGTRIGWA--LVKDMEVAK----KMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFF 350 (456)
Q Consensus 277 ~~i~i~S~SK~~g~~G~RiG~l--~~~~~~~~~----~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l 350 (456)
+.+++-||+|.+|+.|-|+|.+ ++.+++.+. +++...+.+..+++.-...++..+|....-. .++-..+
T Consensus 264 ~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~-----~~W~~ev 338 (427)
T KOG1411|consen 264 EILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLK-----NQWLGEV 338 (427)
T ss_pred ceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHH-----HHHHHHH
Confidence 6888999999999999999986 555555544 4455566677888888888888888743221 1334556
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCC
Q 012785 351 EFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSP 430 (456)
Q Consensus 351 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~ 430 (456)
+.+.+++...|+.|.+.|+..+.. +.+ ..+....|+|.+-.+ ..+++..+.+++.|+... +
T Consensus 339 k~MadRi~~mR~~L~d~L~~~gs~------~~W----~hI~~QIGMF~fTgl--~peQv~~l~ke~~iYmT~-------d 399 (427)
T KOG1411|consen 339 KGMADRIISMRQQLFDALEKEGSP------GNW----SHITKQIGMFCFTGL--NPEQVDWLTKEYHIYLTK-------D 399 (427)
T ss_pred HHHHHhhhhhHHHHhHHhhcCCCC------ccH----HHHHHhhheeeecCC--CHHHHHHHHhhheeeecc-------C
Confidence 777888888899999988865310 011 012334455777777 577888888999998864 2
Q ss_pred CeEEEEecC-ChhHHHHHHHHHHhh
Q 012785 431 KYVRISMLD-RDENYNLFVQRLSKI 454 (456)
Q Consensus 431 ~~iRis~~~-~~e~i~~~l~~L~~~ 454 (456)
+ |||++. +..+.+.+.+.|.++
T Consensus 400 G--RiS~aG~ss~nV~yLa~aih~v 422 (427)
T KOG1411|consen 400 G--RISMAGLSSSNVPYLADAIHAV 422 (427)
T ss_pred c--eEeeccccccCCcccchhhHhH
Confidence 1 999987 666777777777655
No 254
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.72 E-value=1.9e-15 Score=150.99 Aligned_cols=265 Identities=14% Similarity=0.112 Sum_probs=164.0
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeec-c
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWA-G 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~-~ 220 (456)
..++++.+|++++. ++.+++++|.+ ++..++..+.+++| .|++..-.+.......+......+.|+ .
T Consensus 58 ~~~~e~~la~~~~~-------~~~l~~~sG~~-a~~~~~~~~~~~~d----~ii~d~~~H~sv~~~~~~~~~~~~~~~~~ 125 (370)
T PRK05937 58 LDDLEHKIAHFHGA-------PEAFIVPSGYM-ANLGLCAHLSSVTD----YVLWDEQVHISVVYSLSVISGWHQSFRHN 125 (370)
T ss_pred HHHHHHHHHHHhCC-------CeEEEECChHH-HHHHHHHHhCCCCC----EEEEEhhhhHHHHHHHHHcCCceEEecCC
Confidence 47899999999974 34577778774 44455555666776 555545555444455554433334444 3
Q ss_pred Ccccccc---------CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCC----CCCC---CCCCCcE
Q 012785 221 DAKRFNK---------DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQY----TSIT---YPADHDL 279 (456)
Q Consensus 221 d~~~l~~---------~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~----~~~~---~~~~~~i 279 (456)
|.+.++. .++.++++++++|+||.+.+ ++|+++|+++++||+|....+ .+.. ...+.++
T Consensus 126 d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~ 205 (370)
T PRK05937 126 DLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYA 205 (370)
T ss_pred CHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcE
Confidence 5554432 13456778899999999987 488999999999999984211 1111 1122347
Q ss_pred EEecCccccCCCCceEEEEEEeCHHHHHHHHHHH--hhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHH
Q 012785 280 MLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYI--ELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQM 357 (456)
Q Consensus 280 ~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~--~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~ 357 (456)
.+.||||.+|..|.+ ++.. +++.+.+.... .....+.+++...++.++++.+.+. -+..++++
T Consensus 206 ~~~tlsK~~g~~G~~---vl~~-~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~-----------~~~~~~~l 270 (370)
T PRK05937 206 VLVTYSKALGSMGAA---LLSS-SEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQE-----------GELARKQL 270 (370)
T ss_pred EEEechhhhhcCceE---EEcC-HHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhC-----------cHHHHHHH
Confidence 789999999977833 4453 56555544221 1123456677666666666643222 12345667
Q ss_pred HHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEe
Q 012785 358 STRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISM 437 (456)
Q Consensus 358 ~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~ 437 (456)
++.++++.+.|.... .+.. ..+.++. ...+.+.+.|.++||.+... +....+.+|+|+
T Consensus 271 ~~l~~~l~~~l~~~~-------~~~~------------~~i~~~~-~~~~~~~~~L~~~gi~v~~~--~~~~~~~iRis~ 328 (370)
T PRK05937 271 FRLKEYFAQKFSSAA-------PGCV------------QPIFLPG-ISEQELYSKLVETGIRVGVV--CFPTGPFLRVNL 328 (370)
T ss_pred HHHHHHHHHhcCCCC-------CCCE------------EEEEeCC-hhHHHHHHHHHHCCeeEEee--CCCCCCEEEEEc
Confidence 777777776664321 0111 0123321 13467888899999988742 122356899999
Q ss_pred cC--ChhHHHHHHHHHHhhh
Q 012785 438 LD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 438 ~~--~~e~i~~~l~~L~~~l 455 (456)
.. ++|+++++++.|++++
T Consensus 329 ~~~~t~edid~l~~~L~~~~ 348 (370)
T PRK05937 329 HAFNTEDEVDILVSVLATYL 348 (370)
T ss_pred CCCCCHHHHHHHHHHHHHHH
Confidence 74 8999999999998875
No 255
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.71 E-value=1.4e-15 Score=139.54 Aligned_cols=293 Identities=16% Similarity=0.151 Sum_probs=199.3
Q ss_pred cccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceE--EEccCHHHHHHHHHHHhcC--CCCCCCcEEEEeCCCCCC
Q 012785 128 LSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHI--VVGTGSTQLFQAALYALSS--QDASEPISVVSAAPYYSS 203 (456)
Q Consensus 128 ~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I--~~t~G~~~al~~~~~~l~~--~gd~~~~~Vlv~~P~y~~ 203 (456)
...|-|..|+ +.++++.++.+-....+...++++ +-+-+++.|+.+....|.. +.. .|.+..|+|.+
T Consensus 67 NHEYLpi~Gl-----~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~----~VY~SnPTW~n 137 (410)
T KOG1412|consen 67 NHEYLPILGL-----PTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKN----TVYVSNPTWEN 137 (410)
T ss_pred cchhccccCc-----hhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccc----eeEecCCchhH
Confidence 3469999994 999999998873223333334554 3566777888877776632 333 89999999999
Q ss_pred hhhhhhhcCCeEe-e---ec-----cCccccc----cC--CCeEEEEcCCCCCCcccchH--------HhhhcCcEEEee
Q 012785 204 YPSITDCVKSRLY-K---WA-----GDAKRFN----KD--GPYIELVTSPNNPDGSVRQS--------VVNRSGGILVHD 260 (456)
Q Consensus 204 ~~~~~~~~g~~~~-~---~~-----~d~~~l~----~~--~~~~i~v~~P~NPtG~~~~~--------l~~~~~~~iI~D 260 (456)
...+++.+|..-+ . |. +|.+++. .. +...++..+.|||||...++ +.++.+.+.+.|
T Consensus 138 H~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFD 217 (410)
T KOG1412|consen 138 HHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFD 217 (410)
T ss_pred HHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeee
Confidence 9999999995433 2 22 3444442 22 33334444559999999873 566789999999
Q ss_pred ecCCCCCC-CCC---------CCCCCCcEEEecCccccCCCCceEEEE--EEeCHHHHH----HHHHHHhhccCcCChHH
Q 012785 261 LAYYWPQY-TSI---------TYPADHDLMLFTVSKSTGHAGTRIGWA--LVKDMEVAK----KMTKYIELNTIGVSKDS 324 (456)
Q Consensus 261 e~y~~~~~-~~~---------~~~~~~~i~i~S~SK~~g~~G~RiG~l--~~~~~~~~~----~l~~~~~~~~~~~s~~~ 324 (456)
-+|.+..- .+- .......+++-||+|.||+.+-|+|-+ ++.++..+. +|....+..-.+++...
T Consensus 218 iAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyG 297 (410)
T KOG1412|consen 218 IAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYG 297 (410)
T ss_pred hhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchh
Confidence 99986311 111 122345789999999999999999975 444554444 45555566677888888
Q ss_pred HHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc
Q 012785 325 QLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ 404 (456)
Q Consensus 325 q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~ 404 (456)
..++.++|+..+-.. ++..-++.+-.++++.|..|++.|..++ .+|.+ +++....|+|.+-.+
T Consensus 298 ArIV~kvL~tP~lre-----~W~~sik~MssRI~~MR~aLrd~L~aL~------TPGtW----DHI~~QiGMFSyTGL-- 360 (410)
T KOG1412|consen 298 ARIVHKVLSTPELRE-----QWIQSIKTMSSRIKKMRTALRDHLVALK------TPGTW----DHITQQIGMFSYTGL-- 360 (410)
T ss_pred hHHHHHHhcCHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHhcC------CCCcH----HHHHhhccceeecCC--
Confidence 999999998543321 2344456667778888888888887763 12333 234445556877777
Q ss_pred cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC-ChhHHHHHHHHHHhhh
Q 012785 405 EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD-RDENYNLFVQRLSKIL 455 (456)
Q Consensus 405 ~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~-~~e~i~~~l~~L~~~l 455 (456)
....+..+.+++.|++.+- + ||++++ ...+++...++|.+.+
T Consensus 361 tp~qV~~li~~h~vyLl~~-------G--RInisGLN~~NveyVAkAIde~V 403 (410)
T KOG1412|consen 361 TPAQVDHLIENHKVYLLSD-------G--RINISGLNMKNVEYVAKAIDETV 403 (410)
T ss_pred CHHHHHHHHHhceEEEecC-------C--cEeeeccccccHHHHHHHHHHHH
Confidence 4677888888999999872 2 888887 7777777777776653
No 256
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.71 E-value=4.2e-15 Score=148.76 Aligned_cols=272 Identities=15% Similarity=0.172 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHHHhcCccCCC-ceEEEccCHHHHHHHHHHHh---cCCCCCCCcEEEEeCCCCCChh----hhhhhcCCe
Q 012785 143 PEFAKEVVRLHKVVGNAITEN-HHIVVGTGSTQLFQAALYAL---SSQDASEPISVVSAAPYYSSYP----SITDCVKSR 214 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~-~~I~~t~G~~~al~~~~~~l---~~~gd~~~~~Vlv~~P~y~~~~----~~~~~~g~~ 214 (456)
.+.|+.++++++. ++ ++|++++|++++++.++..+ .++|+ +|++..-.|+... ...+..|++
T Consensus 46 ~~~r~~la~~lg~------~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~----~vl~~~~~~~s~~~~~~~~~~~~g~~ 115 (371)
T PF00266_consen 46 EEAREALAKLLGA------PPDEEVVFTSNGTEALNAVASSLLNPLKPGD----EVLVTSNEHPSNRYPWEEIAKRKGAE 115 (371)
T ss_dssp HHHHHHHHHHHTS------STTEEEEEESSHHHHHHHHHHHHHHHGTTTC----EEEEEESSHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHhcCC------ccccccccccccchhhhhhhhcccccccccc----ccccccccccccccccccccccchhh
Confidence 5777778888864 44 78999999999999999999 78899 9999998888766 333456888
Q ss_pred EeeeccCc------ccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcE
Q 012785 215 LYKWAGDA------KRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHDL 279 (456)
Q Consensus 215 ~~~~~~d~------~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i 279 (456)
+..++.+. +.++. .++++++++..+|-||...+ ++|+++++++++|-++.-.. .++. ...+-++
T Consensus 116 v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~-~~id~~~~~~D~ 194 (371)
T PF00266_consen 116 VRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGC-VPIDLDELGADF 194 (371)
T ss_dssp EEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTT-SS--TTTTTESE
T ss_pred hccccccccchhhhhhhhhhhccccceEEeecccccccEEeeeceehhhhhccCCceeEechhcccc-ccccccccccce
Confidence 87665432 33322 47789999899999999877 37889999999999988432 2332 3345679
Q ss_pred EEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhh---------------------ccCcCChHHHHHHHHHHHhhhCC
Q 012785 280 MLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIEL---------------------NTIGVSKDSQLRAAKVLKVVSDS 338 (456)
Q Consensus 280 ~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~---------------------~~~~~s~~~q~~a~~~L~~~~~~ 338 (456)
+++|..|.+|.+| +|++++. ++..++++..... .....+.+...++...++.+.
T Consensus 195 ~~~s~~Kl~gp~G--~g~l~v~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~-- 269 (371)
T PF00266_consen 195 LVFSSHKLGGPPG--LGFLYVR-PEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLE-- 269 (371)
T ss_dssp EEEESTSTTSSST--EEEEEEE-HHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHH--
T ss_pred eeecccccCCCCc--hhhheeh-hhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhh--
Confidence 9999999667666 7999997 8888887432110 011344444555556666432
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhCC
Q 012785 339 CKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGNK 417 (456)
Q Consensus 339 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~g 417 (456)
+.-+++.+++..+..+.+.+.|++++.+.+..+.... ..+..+-+.++. +.+.+.+.|.++|
T Consensus 270 --------~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~---------~~~~i~~~~~~~~~~~~~~~~L~~~~ 332 (371)
T PF00266_consen 270 --------EIGIERIRERIRELAEYLREALEELPGIEVLGPDDEP---------RRPSIVSFNLPGSDADDVVKYLEERG 332 (371)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGG---------BGTTEEEEEETTSSHHHHHHHHHHHT
T ss_pred --------ccccccchhhhhhHHHHHHhhhhcCCceeEeeecccc---------cccceEEEeecCCCHHHHHHHHhhcC
Confidence 3346777888889999999999998876664431111 112234445543 5788888999889
Q ss_pred EEeecCCCCCC-------CCCeEEEEecC--ChhHHHHH
Q 012785 418 ILTRSGKHFGF-------SPKYVRISMLD--RDENYNLF 447 (456)
Q Consensus 418 I~v~pg~~fg~-------~~~~iRis~~~--~~e~i~~~ 447 (456)
|.+..|..+.. -.+.||+|+.. ++||++++
T Consensus 333 I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 333 IAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp EEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred EEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 99999876641 24899999875 88898764
No 257
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=6e-15 Score=149.19 Aligned_cols=206 Identities=13% Similarity=0.097 Sum_probs=143.9
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhh----hhhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSI----TDCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~----~~~~g~~~~~ 217 (456)
...|++.+|++.+. +..+++++++.|+.+++.+++++|| +|++....|...... +...|++++.
T Consensus 71 ~~~Le~~lA~l~g~--------~~av~~sSG~aAi~~al~all~~Gd----~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~ 138 (436)
T PRK07812 71 QDVVEQRIAALEGG--------VAALLLASGQAAETFAILNLAGAGD----HIVSSPRLYGGTYNLFHYTLPKLGIEVSF 138 (436)
T ss_pred HHHHHHHHHHHhCC--------CeEEEEccHHHHHHHHHHHHhCCCC----EEEEeCCcchHHHHHHHHHhhcCeEEEEE
Confidence 36888999988863 3466677778899999999999999 999999888775543 3446777776
Q ss_pred ec--cCcccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCccc
Q 012785 218 WA--GDAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKS 287 (456)
Q Consensus 218 ~~--~d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~ 287 (456)
++ .|.+.++. .++++|++.+|+||+|.+.+ ++|+++|+++|+|+++..+.. ..+...+-++++.|++|.
T Consensus 139 vdd~~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~-~~pl~~GaDivv~S~tK~ 217 (436)
T PRK07812 139 VEDPDDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL-IRPLEHGADIVVHSATKY 217 (436)
T ss_pred ECCCCCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-CCchhcCCCEEEEecccc
Confidence 64 24444443 46789999999999999977 488999999999998874321 112234567999999999
Q ss_pred cCCCCceEEEEEEeCHH------------------------------HHHHHH-HHHhhccCcCChHHHHHHHHHHHhhh
Q 012785 288 TGHAGTRIGWALVKDME------------------------------VAKKMT-KYIELNTIGVSKDSQLRAAKVLKVVS 336 (456)
Q Consensus 288 ~g~~G~RiG~l~~~~~~------------------------------~~~~l~-~~~~~~~~~~s~~~q~~a~~~L~~~~ 336 (456)
+|..|--+|++++.... +..+.+ ..........++...+.+..-|+
T Consensus 218 lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~--- 294 (436)
T PRK07812 218 LGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQGLE--- 294 (436)
T ss_pred cCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCcC---
Confidence 98788778887774221 111111 22233455566665555444443
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 012785 337 DSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFS 375 (456)
Q Consensus 337 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 375 (456)
.+....++..++...+.+.|++++.+.
T Consensus 295 ------------tL~~R~~~~~~nA~~la~~L~~~p~v~ 321 (436)
T PRK07812 295 ------------TLSLRIERHVANAQRVAEFLEARDEVA 321 (436)
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 345556667788888999999987653
No 258
>PRK07678 aminotransferase; Validated
Probab=99.70 E-value=2.7e-15 Score=153.15 Aligned_cols=265 Identities=12% Similarity=0.081 Sum_probs=168.9
Q ss_pred ceEEEccCHHHHHHHHHHHhcCC----CCCCCcEEEEeCCCCCChhhhhhhcC---------------CeEeeecc----
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQ----DASEPISVVSAAPYYSSYPSITDCVK---------------SRLYKWAG---- 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~----gd~~~~~Vlv~~P~y~~~~~~~~~~g---------------~~~~~~~~---- 220 (456)
+.+++++++++|++.+++..... |.....+|+...-+|++....+.... ...++.+.
T Consensus 106 ~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (451)
T PRK07678 106 YVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRM 185 (451)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccc
Confidence 48999999999999999876431 11011179999999999775544321 11111110
Q ss_pred ---------Cccc---c----c---cCCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC
Q 012785 221 ---------DAKR---F----N---KDGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT 272 (456)
Q Consensus 221 ---------d~~~---l----~---~~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~ 272 (456)
|.+. + + ..+..++++...+.-.|.+.+ ++|+++|+++|.||++.+.+.++-.
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~ 265 (451)
T PRK07678 186 PGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKA 265 (451)
T ss_pred cccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchh
Confidence 0111 1 1 124567777554555566654 3899999999999999876554411
Q ss_pred -----CCCCCcEEEecCccccCCCC-ceEEEEEEeCHHHHHHHHH------HHhhccCcCChHHHHHHHHHHHhhhCCCC
Q 012785 273 -----YPADHDLMLFTVSKSTGHAG-TRIGWALVKDMEVAKKMTK------YIELNTIGVSKDSQLRAAKVLKVVSDSCK 340 (456)
Q Consensus 273 -----~~~~~~i~i~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~------~~~~~~~~~s~~~q~~a~~~L~~~~~~~~ 340 (456)
..-..+|+ +++|.+| .| +.+|.++++ +++++.+.. .....|++.++++..++.+.|+.+.+.
T Consensus 266 ~~~~~~gv~PDiv--t~gK~lg-gG~~Pi~av~~~-~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~-- 339 (451)
T PRK07678 266 FGFMNYGVKPDII--TMAKGIT-SAYLPLSATAVK-KEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENE-- 339 (451)
T ss_pred HHHHhcCCCCCEE--Eeecccc-cCCcceeEEEEc-HHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhC--
Confidence 11123444 6899998 77 799999997 899888763 134578999999999999999976543
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC--------c---cHHHH
Q 012785 341 PSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE--------Q---EIEDC 409 (456)
Q Consensus 341 ~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~--------~---~~~~~ 409 (456)
+.+++.++.-+..++.|.+.+++++.+.-.+..|.+ +-+.+. . ....+
T Consensus 340 -------~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~--------------~~i~~~~~~~~~~~~~~~~a~~i 398 (451)
T PRK07678 340 -------NLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLL--------------VGIELVNDKETKEPADNDKVASV 398 (451)
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceE--------------EEEEEecCCcccCcCchHHHHHH
Confidence 334444443344444444445555543334445544 333331 0 13456
Q ss_pred HHHHHhCCEEeecCCCCC-CCCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 410 ESFLKGNKILTRSGKHFG-FSPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 410 ~~~l~~~gI~v~pg~~fg-~~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
...+.++||++.+..... ...+.+|++.. .+++++++++++|.+++
T Consensus 399 ~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l 447 (451)
T PRK07678 399 VAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTAL 447 (451)
T ss_pred HHHHHHCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 777889999997632111 12478999854 39999999999999876
No 259
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=1.6e-14 Score=143.72 Aligned_cols=205 Identities=12% Similarity=0.080 Sum_probs=154.0
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhh----hhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSIT----DCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~----~~~g~~~~~ 217 (456)
...|++.||++-+ .+..+++++++.|+..++.+++++|| +|+++...|.+....+ +..|+++..
T Consensus 64 ~~~le~~la~LEg--------~~~a~~~~SGmaAi~~~~~~ll~~GD----~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~ 131 (395)
T PRK08114 64 HFSLQEAMCELEG--------GAGCALYPCGAAAVANAILAFVEQGD----HVLMTGTAYEPTQDFCSKILSKLGVTTTW 131 (395)
T ss_pred HHHHHHHHHHHhC--------CCeEEEEhHHHHHHHHHHHHHcCCCC----EEEEeCCCcHHHHHHHHHHHHhcCcEEEE
Confidence 3678888888653 35777888899999999999999999 9999999997776654 556888877
Q ss_pred ecc-Ccccccc---CCCeEEEEcCCCCCCcccch-----HHhhhc--CcEEEeeecCCCCCCCCCCCCCCCcEEEecCcc
Q 012785 218 WAG-DAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRS--GGILVHDLAYYWPQYTSITYPADHDLMLFTVSK 286 (456)
Q Consensus 218 ~~~-d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~--~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK 286 (456)
++. |.+.++. .++++|++.+|.||+|.+.+ ++|+++ |+++|+|.++.-+.. --+...+-+++++|.+|
T Consensus 132 vd~~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~pl~~GaDivv~S~tK 210 (395)
T PRK08114 132 FDPLIGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-FKALDFGIDISIQAGTK 210 (395)
T ss_pred ECCCCHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-cCHHHcCCcEEEEcCcc
Confidence 653 4555543 36899999999999999987 377887 599999999985422 11234467899999999
Q ss_pred cc-CCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHH
Q 012785 287 ST-GHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLR 365 (456)
Q Consensus 287 ~~-g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ 365 (456)
.+ |++.+-.|.++.. ++..+.++..........+++..+.+...|+ .+.-..++..++...+.
T Consensus 211 yl~Ghsdv~~G~v~~~-~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~---------------TL~lR~~~~~~na~~va 274 (395)
T PRK08114 211 YLVGHSDAMIGTAVAN-ARCWEQLRENSYLMGQMVDADTAYMTSRGLR---------------TLGVRLRQHEESSLKVA 274 (395)
T ss_pred cccCCCcceeEEEEcC-HHHHHHHHHHHHhccCCCCHHHHHHHHcCCC---------------cHHHHHHHHHHHHHHHH
Confidence 77 4445778866664 7777777766665666778777776666554 34455677778888999
Q ss_pred HHHHhcCCcc
Q 012785 366 MAVQKSGLFS 375 (456)
Q Consensus 366 ~~L~~~~~~~ 375 (456)
+.|++++.++
T Consensus 275 ~~L~~hp~V~ 284 (395)
T PRK08114 275 EWLAEHPEVA 284 (395)
T ss_pred HHHHcCCCEe
Confidence 9999987554
No 260
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.69 E-value=1.9e-14 Score=143.12 Aligned_cols=279 Identities=14% Similarity=0.159 Sum_probs=180.3
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChh----hhhhhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYP----SITDCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~----~~~~~~g~~~~~ 217 (456)
..+|++.++++.+. ++.+++++++.|+.+++.++.++|| +|+++.+.|.+.. ..+...|+++..
T Consensus 66 ~~~lE~~la~leg~--------~~av~~sSG~aAi~~al~all~~GD----~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~f 133 (384)
T PRK06434 66 VQAFEEKYAVLENA--------EHALSFSSGMGAITSAILSLIKKGK----RILSISDLYGQTFYFFNKVLKTLGIHVDY 133 (384)
T ss_pred HHHHHHHHHHHhCC--------CcEEEeCCHHHHHHHHHHHHhCCCC----EEEEecCccchHHHHHHHHHHhcCcEEEE
Confidence 36888888888852 4677777778999999999999999 9999988766655 455667888888
Q ss_pred eccCc-cccc--cCCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCccccC
Q 012785 218 WAGDA-KRFN--KDGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKSTG 289 (456)
Q Consensus 218 ~~~d~-~~l~--~~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~g 289 (456)
++.|. +.++ ..++++|++..|.|||+.+.+ ++|++++ +++|.++..+ +...+...+-+++++|.+|.++
T Consensus 134 vd~~~~~~~~l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~-~~~~pl~~gaDivv~S~tK~i~ 210 (384)
T PRK06434 134 IDTDRLNSLDFDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASP-YNQNPLDLGADVVIHSATKYIS 210 (384)
T ss_pred ECCCChhheeecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCc-ccCCchhcCCCEEEeecccccC
Confidence 77654 3443 346899999999999998866 3788888 4569997533 2222223456899999999996
Q ss_pred CCC-ceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 012785 290 HAG-TRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAV 368 (456)
Q Consensus 290 ~~G-~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L 368 (456)
-+| .=.|.+++.++++.++++..+.......+++..+.+..-|+ .++...++.+++...+.+.|
T Consensus 211 G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~---------------tL~~R~~r~~~~a~~~a~~L 275 (384)
T PRK06434 211 GHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLK---------------TLGLRMEKHNKNGMELARFL 275 (384)
T ss_pred CCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCC---------------cHHHHHHHHHHHHHHHHHHH
Confidence 444 55677777667888888766544445556554444444333 35556666778888899999
Q ss_pred HhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEE---eecCCC--------------------
Q 012785 369 QKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKIL---TRSGKH-------------------- 425 (456)
Q Consensus 369 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~---v~pg~~-------------------- 425 (456)
+.++.+.....+|.- ..++.....+..+-+.+++ .+.+.+.+..-.+. +.-|..
T Consensus 276 ~~~p~v~~V~yPgl~--~~~~~~~g~g~~~sf~l~~-~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~ 352 (384)
T PRK06434 276 RDSKKISNVYYPDTE--IGKKVLRGFGGMLSFELRS-MEDVHKFIRNLEIPMVAASLGGVESLITLPVETSHSSLSPEER 352 (384)
T ss_pred HcCCCccEEECCChH--HHHHhcCCCCceEEEEECC-HHHHHHHHHhCCcceEccCCCCCCeeeECCCccccccCCHHHH
Confidence 998765433222211 1111122223345566653 44444444443332 221211
Q ss_pred --CCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 426 --FGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 426 --fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
.|..++.||||++. |+.+.+++.|.+.|
T Consensus 353 ~~~gi~~~liRlsvGl--Ed~~dLi~dl~~Al 382 (384)
T PRK06434 353 ERLGISDNLVRFSIGI--EDIDDLIKDIENAL 382 (384)
T ss_pred HhcCCCcCeEEEEeCc--CCHHHHHHHHHHHh
Confidence 11235789999854 35566677776665
No 261
>PRK07482 hypothetical protein; Provisional
Probab=99.69 E-value=2.7e-15 Score=153.41 Aligned_cols=261 Identities=11% Similarity=0.007 Sum_probs=167.2
Q ss_pred ceEEEccCHHHHHHHHHHHhcCC----CCCCCcEEEEeCCCCCChhhhhhhcCC---------------eEeeecc----
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQ----DASEPISVVSAAPYYSSYPSITDCVKS---------------RLYKWAG---- 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~----gd~~~~~Vlv~~P~y~~~~~~~~~~g~---------------~~~~~~~---- 220 (456)
+.+++++++++|++.+++..... |.....+|+...-+|++....+..... ..+.++.
T Consensus 112 ~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 191 (461)
T PRK07482 112 SKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRR 191 (461)
T ss_pred CEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccc
Confidence 58999999999999999977421 211112899999999997654333211 1111110
Q ss_pred -------------Cccccc----c---CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCC
Q 012785 221 -------------DAKRFN----K---DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSI 271 (456)
Q Consensus 221 -------------d~~~l~----~---~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~ 271 (456)
+.+.++ . .++.+|++...+.-.|...+ ++|+++|+++|.||++.+.+.++-
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~ 271 (461)
T PRK07482 192 ADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGS 271 (461)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcc
Confidence 112221 1 24567777555655576654 389999999999999997655542
Q ss_pred CC-----CCCCcEEEecCccccCCCCc-eEEEEEEeCHHHHHHHHHH-------HhhccCcCChHHHHHHHHHHHhhhCC
Q 012785 272 TY-----PADHDLMLFTVSKSTGHAGT-RIGWALVKDMEVAKKMTKY-------IELNTIGVSKDSQLRAAKVLKVVSDS 338 (456)
Q Consensus 272 ~~-----~~~~~i~i~S~SK~~g~~G~-RiG~l~~~~~~~~~~l~~~-------~~~~~~~~s~~~q~~a~~~L~~~~~~ 338 (456)
.. .-..+|++ ++|.++ .|. .+|.+++. +++.+.+... ....|++.++++..++.+.|+.+.+.
T Consensus 272 ~~a~~~~gv~PDiv~--~gKgl~-gG~~Pi~av~~~-~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~ 347 (461)
T PRK07482 272 MFGSDHYGIEPDLIT--VAKGLT-SAYAPLSGSIVG-EKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERE 347 (461)
T ss_pred hhhHHhcCCCCCEEE--Eccccc-cCccccceeeec-HHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhC
Confidence 21 11234544 799998 785 99999996 8888877531 24468899999999999999977653
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-------------c
Q 012785 339 CKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-------------E 405 (456)
Q Consensus 339 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-------------~ 405 (456)
+.+++.++.-+..++.|.+.+++++.+.-.+..|.+ +.+.+.. .
T Consensus 348 ---------~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm--------------~giel~~~~~~~~~~~~~~~~ 404 (461)
T PRK07482 348 ---------NLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGML--------------AAVEFVADRDDRTPFDPALKI 404 (461)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeE--------------EEEEeccCCCcCCCCChhhHH
Confidence 344444433333444444444455544444445544 3444421 0
Q ss_pred HHHHHHHHHhCCEEeecCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhh
Q 012785 406 IEDCESFLKGNKILTRSGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 406 ~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l 455 (456)
...+...+.++||+++++. ..+.+|+. +..+++++++++++|.+.+
T Consensus 405 ~~~i~~~~~~~Gvl~~~~~----~~~~i~~~Ppl~it~~ei~~~~~~l~~~l 452 (461)
T PRK07482 405 GPQVSAAALERGVIARAMP----HGDILGFAPPLVLTRAEADEIVAIAKDAV 452 (461)
T ss_pred HHHHHHHHHHCCcEEecCC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 2456777889999987632 24678886 5459999999999998876
No 262
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.69 E-value=1.6e-15 Score=150.05 Aligned_cols=254 Identities=11% Similarity=0.128 Sum_probs=168.5
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcC-CC-CCCCcEEEEeCCCCCChhhhhhhc--------C
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSS-QD-ASEPISVVSAAPYYSSYPSITDCV--------K 212 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~-~g-d~~~~~Vlv~~P~y~~~~~~~~~~--------g 212 (456)
.+|.+.++++.+ .+++++++++++|++.+++.... .| + +|+..+-+|++....+... +
T Consensus 69 ~~la~~l~~~~~--------~~~v~~~~SGseA~e~Alklar~~~gr~----~Ii~~~~syHG~t~~~ls~~~~~~~~~~ 136 (364)
T PRK04013 69 EEMLEELSKWVN--------YEYVYMGNSGTEAVEAALKFARLYTGRK----EIIAMTNAFHGRTMGALSATWKPKYRED 136 (364)
T ss_pred HHHHHHHHhhcC--------CCEEEEeCchHHHHHHHHHHHHHHhCCC----EEEEECCccccCchhhccCCCCcccccC
Confidence 455566655541 25899999999999999997743 34 4 8999999999976544432 1
Q ss_pred -------CeEeeeccCcccccc---CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCCC
Q 012785 213 -------SRLYKWAGDAKRFNK---DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSITY 273 (456)
Q Consensus 213 -------~~~~~~~~d~~~l~~---~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~~ 273 (456)
...++++ |.+.++. .+++++++...+...|...+ ++|+++|+++|+||++.+. .++-..
T Consensus 137 ~~p~~~~~~~~~~~-d~~~l~~~i~~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~ 214 (364)
T PRK04013 137 FEPLVPGFKHIPFN-DVEAAKEAITKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFL 214 (364)
T ss_pred CCCCCCCcEEecCC-CHHHHHHHhcCCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchh
Confidence 1111222 3444432 35678888666665555443 3899999999999999865 333211
Q ss_pred -----CCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchh
Q 012785 274 -----PADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDEC 348 (456)
Q Consensus 274 -----~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~ 348 (456)
....+ +.+++|.+| .|+.+|.++.. +++. ......|++.++++..++.+.|+.+++. +
T Consensus 215 a~~~~gv~PD--iv~~gK~lg-gG~P~~a~~~~-~~~~----~~~~~~T~~gnp~~~aaa~a~l~~i~~~---------~ 277 (364)
T PRK04013 215 AIEHYKVEPD--IVTMGKGIG-NGVPVSLTLTN-FDVE----RGKHGSTFGGNPLACKAVAVTLRILRRE---------R 277 (364)
T ss_pred HHHhcCCCCC--EEEeccccc-CCceeEEEEec-cccc----CCCcCCCCCcCHHHHHHHHHHHHHHHhc---------c
Confidence 11223 455799999 79999999986 5542 2335579999999999999999987653 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCC
Q 012785 349 FFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGF 428 (456)
Q Consensus 349 ~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~ 428 (456)
.+++.++. +. .+.. +.+.-.+..|. ++-+++......+.+.+.++|+++.+.
T Consensus 278 l~~~~~~~-------l~-~l~~-~~v~~vRG~Gl--------------~~gve~~~~~~~i~~~~~~~Gll~~~~----- 329 (364)
T PRK04013 278 LVEKAGEK-------FI-EIKG-ERVVTTRGRGL--------------MIGIVLKKPVGKYVEELQNRGYLVHTA----- 329 (364)
T ss_pred HHHHHHHH-------HH-Hhcc-CcceeeeeCcE--------------EEEEEeCCcHHHHHHHHHhCCcEEeeC-----
Confidence 34433332 22 2221 22223333443 466666544566778888999999762
Q ss_pred CCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 429 SPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 429 ~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
+.+.+|+.-. .+++++++++++|.+.+
T Consensus 330 g~~vlr~~Ppl~it~~~i~~~~~~l~~~l 358 (364)
T PRK04013 330 GQRVIRLLPPLIISKDTMEEAKSAIEGVI 358 (364)
T ss_pred CCCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 2478899843 48999999999999876
No 263
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.68 E-value=4.4e-14 Score=138.65 Aligned_cols=205 Identities=12% Similarity=0.117 Sum_probs=154.6
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhh----cCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDC----VKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~----~g~~~~~ 217 (456)
...|+++++.+-+ .++.+.+++++.||..++.++.++|| +|++++..|.+....+.. .|+++..
T Consensus 65 ~~~lE~~~a~LEg--------~~~~~afsSGmaAI~~~~l~ll~~GD----~vl~~~~~YG~t~~~~~~~l~~~gi~~~~ 132 (396)
T COG0626 65 RDALEEALAELEG--------GEDAFAFSSGMAAISTALLALLKAGD----HVLLPDDLYGGTYRLFEKILQKFGVEVTF 132 (396)
T ss_pred HHHHHHHHHHhhC--------CCcEEEecCcHHHHHHHHHHhcCCCC----EEEecCCccchHHHHHHHHHHhcCeEEEE
Confidence 4788888888874 45788888889999999999999999 999999999886665544 5777775
Q ss_pred ecc-Ccccc----ccCCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC-CCCCCCCCCCcEEEecCcc
Q 012785 218 WAG-DAKRF----NKDGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ-YTSITYPADHDLMLFTVSK 286 (456)
Q Consensus 218 ~~~-d~~~l----~~~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~-~~~~~~~~~~~i~i~S~SK 286 (456)
++. |.+.. .+.++++|++.+|.|||-.+.+ ++++++|+++|+|+.|..|- ..|+ ..+-+|++.|.+|
T Consensus 133 ~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL--~~GaDIVvhSaTK 210 (396)
T COG0626 133 VDPGDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQRPL--ELGADIVVHSATK 210 (396)
T ss_pred ECCCChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccChh--hcCCCEEEEeccc
Confidence 553 22222 2247899999999999999876 47888999999999998652 2334 3456899999999
Q ss_pred cc-CCCCceEEEEEEeCHHHHHHHHHHHh-hccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHH
Q 012785 287 ST-GHAGTRIGWALVKDMEVAKKMTKYIE-LNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQL 364 (456)
Q Consensus 287 ~~-g~~G~RiG~l~~~~~~~~~~l~~~~~-~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l 364 (456)
.+ |+..+=.|.++++++++.+.+..... ......+++..+.+..-|+ .+.-..++..++...+
T Consensus 211 yl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlk---------------TL~~Rm~~~~~nA~~I 275 (396)
T COG0626 211 YLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLR---------------TLALRMERHNENALKI 275 (396)
T ss_pred cccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccc---------------hHHHHHHHHHHHHHHH
Confidence 99 45666677677676777777644443 3667788888877777665 3444566677788899
Q ss_pred HHHHHhcCCcc
Q 012785 365 RMAVQKSGLFS 375 (456)
Q Consensus 365 ~~~L~~~~~~~ 375 (456)
.+.|++++.++
T Consensus 276 A~~L~~~p~V~ 286 (396)
T COG0626 276 AEFLADHPKVK 286 (396)
T ss_pred HHHHhcCCCeE
Confidence 99999987554
No 264
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.68 E-value=1.8e-14 Score=146.26 Aligned_cols=158 Identities=12% Similarity=0.068 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHh---------cCCCCCCCcEEEEeCCCCCChhhhhhhcCC
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYAL---------SSQDASEPISVVSAAPYYSSYPSITDCVKS 213 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l---------~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~ 213 (456)
.+|++++|++++. +++++++|+++++.+++.++ ..+|| +|+++.|+|+.+...+...|+
T Consensus 66 ~~fe~~lA~~~g~--------~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd----~VIv~~~t~~a~~~~v~~~G~ 133 (438)
T PRK15407 66 DAFEKKLAEFLGV--------RYALLVNSGSSANLLAFSALTSPKLGDRALKPGD----EVITVAAGFPTTVNPIIQNGL 133 (438)
T ss_pred HHHHHHHHHHhCC--------CeEEEECCHHHHHHHHHHHHhhccccccCCCCCC----EEEECCCCcHHHHHHHHHcCC
Confidence 7899999999963 47889999999999999876 37888 999999999999999999999
Q ss_pred eEeeeccC-------cccccc---CCCeEEEEcCC-CCCCccc-chHHhhhcCcEEEeeecCCC-CCCCCCCCCCCCcEE
Q 012785 214 RLYKWAGD-------AKRFNK---DGPYIELVTSP-NNPDGSV-RQSVVNRSGGILVHDLAYYW-PQYTSITYPADHDLM 280 (456)
Q Consensus 214 ~~~~~~~d-------~~~l~~---~~~~~i~v~~P-~NPtG~~-~~~l~~~~~~~iI~De~y~~-~~~~~~~~~~~~~i~ 280 (456)
+++.+++| .+.++. .++++|+++++ +||.-.- +-++|+++|+++|+|++|.- ..+.+.....-.++.
T Consensus 134 ~pv~vdvd~~~~~id~~~le~~i~~~tkaVi~~~~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~gd~~ 213 (438)
T PRK15407 134 VPVFVDVELPTYNIDASLLEAAVSPKTKAIMIAHTLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFGDIA 213 (438)
T ss_pred EEEEEecCCCcCCcCHHHHHHHcCcCCeEEEEeCCCCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccCceE
Confidence 98766554 333332 36788888654 4443210 11489999999999999973 223332111112577
Q ss_pred EecCc--cccCCCCceEEEEEEeCHHHHHHHHHHHh
Q 012785 281 LFTVS--KSTGHAGTRIGWALVKDMEVAKKMTKYIE 314 (456)
Q Consensus 281 i~S~S--K~~g~~G~RiG~l~~~~~~~~~~l~~~~~ 314 (456)
++||. |.+. .| .-|++++.|+++.++++..+.
T Consensus 214 ~fSf~~~k~~~-~g-eGG~l~t~d~~l~~~~~~~~~ 247 (438)
T PRK15407 214 TLSFYPAHHIT-MG-EGGAVFTNDPLLKKIIESFRD 247 (438)
T ss_pred EEeCCCCCCcc-cc-CceEEEECCHHHHHHHHHHHH
Confidence 77875 5553 33 359999999999888877654
No 265
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.68 E-value=2.6e-14 Score=147.21 Aligned_cols=319 Identities=14% Similarity=0.110 Sum_probs=196.2
Q ss_pred ecCCCCCCCchhHhhhcccccccccCccccccc---cCCCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEEEccCHHH
Q 012785 99 VDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYF---SDVRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIVVGTGSTQ 174 (456)
Q Consensus 99 l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y---~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~~t~G~~~ 174 (456)
++.|.|++..++.+.+..... ..+...+.| +..+| ..+++..+++++.. .|.+ ...+..++|+.+
T Consensus 73 ~g~G~~~~~~~p~i~~~~~~~---~~~~~~tpYq~e~~sqG-----~lel~~~~~~~la~l~G~~---~~~l~~~~GA~a 141 (481)
T PRK04366 73 YPLGSCTMKYNPKINEKVARL---PGFAELHPLQPEETVQG-----ALELMYELQEWLKEITGMD---AVTLQPAAGAHG 141 (481)
T ss_pred ecCcccCCCCCHHHHHHHHhC---cchhcCCCCCChhhhhH-----HHHHHHHHHHHHHHHhCCC---ceEEEeCcHHHH
Confidence 677878877777666543321 123333456 34567 47888888888743 4542 346666778777
Q ss_pred HHHHH--HH-HhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC------cccccc---CCCeEEEEcCCCCCC
Q 012785 175 LFQAA--LY-ALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD------AKRFNK---DGPYIELVTSPNNPD 242 (456)
Q Consensus 175 al~~~--~~-~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d------~~~l~~---~~~~~i~v~~P~NPt 242 (456)
.+..+ ++ .+.++||....+|++++|.|+.+...++..|++++.++.| .+.++. .+++++++++|| ||
T Consensus 142 ~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~t 220 (481)
T PRK04366 142 ELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTNPN-TL 220 (481)
T ss_pred HHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcccCCeEEEEeCCC-Cc
Confidence 66543 22 3345554222289999999999999999999998876653 333432 367889999998 99
Q ss_pred cccc-h-----HHhhhcCcEEEeeecCCCCCCCCC-CCCCCCcEEEecCccccCCC----CceEEEEEEeCHHHHHHHHH
Q 012785 243 GSVR-Q-----SVVNRSGGILVHDLAYYWPQYTSI-TYPADHDLMLFTVSKSTGHA----GTRIGWALVKDMEVAKKMTK 311 (456)
Q Consensus 243 G~~~-~-----~l~~~~~~~iI~De~y~~~~~~~~-~~~~~~~i~i~S~SK~~g~~----G~RiG~l~~~~~~~~~~l~~ 311 (456)
|.+- + ++|+++|+++|+|.++.......+ +...+-+++++|..|.++.| |--+|++.+. +++.+.+..
T Consensus 221 G~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~-~~~~~~lp~ 299 (481)
T PRK04366 221 GLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVK-EELAPFLPV 299 (481)
T ss_pred cccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCEEEEechhhcCCCCCCCCCCeeeeeeh-hhhHhhCCC
Confidence 9762 2 378889999999999852111111 23345689999999998744 3457888886 666655420
Q ss_pred H------H-------------hhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 012785 312 Y------I-------------ELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSG 372 (456)
Q Consensus 312 ~------~-------------~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~ 372 (456)
. . ..-.+..+.+...++...+.. -+ .+-+++..++..++.+++.+.|+++
T Consensus 300 ~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~--~G--------~~Gl~~~a~~~~~~a~~l~~~L~~~- 368 (481)
T PRK04366 300 PVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRS--LG--------AEGLREVSEDAVLNANYLKARLKDI- 368 (481)
T ss_pred CeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHH--HH--------HHHHHHHHHHHHHHHHHHHHHhHhh-
Confidence 0 0 000011112222333333332 12 3445566666677788888888875
Q ss_pred CccccCCCCcccccccccCCCCCceEEee-----cCc-cHHHHHHHHHhCCEEeecCCCCCC-CCCeEEEEecC--ChhH
Q 012785 373 LFSVPELPSQFCTFLGRAFEPQPAFAWLK-----CEQ-EIEDCESFLKGNKILTRSGKHFGF-SPKYVRISMLD--RDEN 443 (456)
Q Consensus 373 ~~~~~~~~g~~~~~~~~~~~~~~~f~~~~-----~~~-~~~~~~~~l~~~gI~v~pg~~fg~-~~~~iRis~~~--~~e~ 443 (456)
+.+... +.... -..++ .++ +..++.+.|.++||.+. +..|.. ..+.+|++++- ++++
T Consensus 369 -~~~~~~-~~~~~-----------~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~-~~~~p~~~~~~l~is~~e~~t~ed 434 (481)
T PRK04366 369 -YDLPYD-RPCMH-----------EFVLSGKKLKETGVRTLDIAKRLLDYGFHPP-TIYFPLIVPEALMIEPTETESKET 434 (481)
T ss_pred -CcccCC-CCeeE-----------EEEEECccccccCCCHHHHHHHHHHCCccCC-ccccccccCCeEEEcccCCCCHHH
Confidence 222211 11100 02222 222 56789999999999866 233322 36789999863 8899
Q ss_pred HHHHHHHHHhhh
Q 012785 444 YNLFVQRLSKIL 455 (456)
Q Consensus 444 i~~~l~~L~~~l 455 (456)
++.+++.|+++.
T Consensus 435 id~l~~~l~~i~ 446 (481)
T PRK04366 435 LDAFIAAMKQIA 446 (481)
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 266
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.68 E-value=9.8e-15 Score=147.81 Aligned_cols=265 Identities=12% Similarity=0.048 Sum_probs=168.6
Q ss_pred CCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhh----hhhhcCCeE----eeecc------Cccccc-
Q 012785 162 ENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPS----ITDCVKSRL----YKWAG------DAKRFN- 226 (456)
Q Consensus 162 ~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~----~~~~~g~~~----~~~~~------d~~~l~- 226 (456)
++++|++|+|++++++.++..+.++++.. ..|++....|+.... .++..|+++ +.++. |.+.++
T Consensus 85 ~~~~v~~~~~~t~~l~~~~~~~~~~~~~~-~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~ 163 (406)
T TIGR01814 85 KEDEVVVMNTLTINLHLLLASFYKPTPKR-YKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILD 163 (406)
T ss_pred CCCcEEEeCCchHHHHHHHHHhcCCcCCc-cEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHH
Confidence 46789999999999999999886654311 168888899987332 345568776 33332 333332
Q ss_pred -----cCCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcEEEecCcccc-CCCCce
Q 012785 227 -----KDGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHDLMLFTVSKST-GHAGTR 294 (456)
Q Consensus 227 -----~~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i~i~S~SK~~-g~~G~R 294 (456)
..++++++++.++|.||..++ ++|+++|+++++|+++..... ++. ...+-+++++|..|.+ |.||
T Consensus 164 ~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~-~id~~~~gvD~~~~s~hK~l~g~pG-- 240 (406)
T TIGR01814 164 TIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNV-PLDLHDWGVDFACWCTYKYLNAGPG-- 240 (406)
T ss_pred HHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCc-ccccccCCCCEEEEcCccccCCCCC--
Confidence 136789999999999999987 488999999999999885322 232 2345689999999976 4466
Q ss_pred EEEEEEeCHHHHHHHHHHHh-----------------------hccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHH
Q 012785 295 IGWALVKDMEVAKKMTKYIE-----------------------LNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFE 351 (456)
Q Consensus 295 iG~l~~~~~~~~~~l~~~~~-----------------------~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~ 351 (456)
.| +++..+. ...+..... .....++.....++.++|+.+.+. -++
T Consensus 241 ~~-l~v~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~----------g~~ 308 (406)
T TIGR01814 241 AG-AFVHEKH-AHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQA----------GME 308 (406)
T ss_pred eE-EEEehhh-hhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhc----------CHH
Confidence 44 4443133 222221100 001123444555555566644221 245
Q ss_pred HHHHHHHHHHHHHHHHHHhc----CCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCC
Q 012785 352 FTNHQMSTRWKQLRMAVQKS----GLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFG 427 (456)
Q Consensus 352 ~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg 427 (456)
+.+++.++..+++.+.|++. +++.+..+.... ..+..+.+.++.+.+.+.+.|.++||.+..
T Consensus 309 ~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~---------~r~~~v~~~~~~~~~~~~~~L~~~gi~v~~----- 374 (406)
T TIGR01814 309 ALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHA---------QRGCQLSLTHPVPGKAVFQALIKRGVIGDK----- 374 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChh---------hcCCeEEEEecCCHHHHHHHHHHCCEEEec-----
Confidence 67777888888888888764 124443321100 011134444543456788888899998863
Q ss_pred CCCCeEEEEec--C-ChhHHHHHHHHHHhhhC
Q 012785 428 FSPKYVRISML--D-RDENYNLFVQRLSKILS 456 (456)
Q Consensus 428 ~~~~~iRis~~--~-~~e~i~~~l~~L~~~l~ 456 (456)
..++.||+|++ . ++++++.+++.|+++++
T Consensus 375 ~~~~~iRiS~~~~~nt~~did~l~~~l~~~~~ 406 (406)
T TIGR01814 375 REPSVIRVAPVPLYNTFVDVYDAVNVLEEILD 406 (406)
T ss_pred cCCCeEEEechhccCCHHHHHHHHHHHHHHhC
Confidence 12469999983 3 89999999999998864
No 267
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.68 E-value=8.8e-15 Score=149.24 Aligned_cols=258 Identities=12% Similarity=0.046 Sum_probs=165.6
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhc-C---------------CeEeeecc------
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCV-K---------------SRLYKWAG------ 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~-g---------------~~~~~~~~------ 220 (456)
+.++++++++||++.+++.... .|.. +|+...-+|++....+..+ + ...++++.
T Consensus 114 ~~v~f~~SGsEA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 190 (457)
T PRK05639 114 PKVLFGLSGSDAVDMAIKVSKFSTRRP---WILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPW 190 (457)
T ss_pred CEEEEeCchHHHHHHHHHHHHHhcCCC---eEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccc
Confidence 5899999999999999987643 2221 7999999999976544332 1 11112220
Q ss_pred ------Ccc--------ccc---------cCCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCC
Q 012785 221 ------DAK--------RFN---------KDGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQY 268 (456)
Q Consensus 221 ------d~~--------~l~---------~~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~ 268 (456)
|.+ .++ ..+..++++..-+...|.+.+ ++|+++|+++|.||++.+.+.
T Consensus 191 ~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~Gr 270 (457)
T PRK05639 191 GINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGR 270 (457)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCc
Confidence 111 111 234567777555666676654 389999999999999987544
Q ss_pred CCCC-----CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCC
Q 012785 269 TSIT-----YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSG 343 (456)
Q Consensus 269 ~~~~-----~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~ 343 (456)
++.. ..-..+|++ |+|.++ .|+.+|.+++. +++++ +.......+++.++++..++.+.|+.+.+.
T Consensus 271 tG~~~a~~~~gv~PDiv~--~gK~l~-gG~pi~av~~~-~~i~~-~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~----- 340 (457)
T PRK05639 271 TGKWFASEWFEVKPDLII--FGKGVA-SGMGLSGVIGR-KELMD-LTSGSALLTPAANPVISAAAEATLEIIEEE----- 340 (457)
T ss_pred CchHHHHHhcCCCCCEEE--echhhc-CCCcceeEEeh-HHHHh-hcCCCcccCCCcCHHHHHHHHHHHHHHHHc-----
Confidence 4321 111334555 899998 89999999996 88887 322223468889999999999999876543
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeec--C----c--cHHHHHHHHHh
Q 012785 344 SEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKC--E----Q--EIEDCESFLKG 415 (456)
Q Consensus 344 ~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~--~----~--~~~~~~~~l~~ 415 (456)
+.+++.++.-+..++.|.+...+.+.+.-.+..|.+ +.+.+ + . ....+.+.+.+
T Consensus 341 ----~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~--------------~gve~~~~~~~~~~~~~~~~~~~~~~ 402 (457)
T PRK05639 341 ----NLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLM--------------IGVEIVKENGKPDPELTGKICWRAFE 402 (457)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeE--------------EEEEEecCCCCCCHHHHHHHHHHHHh
Confidence 333444433333333344333334433334455544 33333 1 1 13456777889
Q ss_pred CCEEeecCCCCCCCCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 416 NKILTRSGKHFGFSPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 416 ~gI~v~pg~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
+||.+.+. +...+.+|+.-. .+++++++++++|.+.+
T Consensus 403 ~Gv~~~~~---g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l 441 (457)
T PRK05639 403 LGLILPSY---GMFGNVIRITPPLVITKEIAEKGLEIMERAI 441 (457)
T ss_pred CCeEEeec---CCCCCEEEEeCCCccCHHHHHHHHHHHHHHH
Confidence 99999763 333578999855 49999999999998876
No 268
>PRK05965 hypothetical protein; Provisional
Probab=99.67 E-value=2.9e-15 Score=153.10 Aligned_cols=257 Identities=14% Similarity=0.107 Sum_probs=165.7
Q ss_pred CceEEEccCHHHHHHHHHHHhcCC----CCCCCcEEEEeCCCCCChhhhhhhc-C--------------CeEeeec----
Q 012785 163 NHHIVVGTGSTQLFQAALYALSSQ----DASEPISVVSAAPYYSSYPSITDCV-K--------------SRLYKWA---- 219 (456)
Q Consensus 163 ~~~I~~t~G~~~al~~~~~~l~~~----gd~~~~~Vlv~~P~y~~~~~~~~~~-g--------------~~~~~~~---- 219 (456)
.+++++++++++|++.+++..... |.....+|+...-+|++....+... + ...++++
T Consensus 107 ~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (459)
T PRK05965 107 LNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYR 186 (459)
T ss_pred cCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccc
Confidence 358999999999999999876431 2111117999999999986533222 1 1111111
Q ss_pred ----cCc--------cccc----c---CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCC
Q 012785 220 ----GDA--------KRFN----K---DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSI 271 (456)
Q Consensus 220 ----~d~--------~~l~----~---~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~ 271 (456)
.|. +.++ . .+..++++...+.-.|...+ ++|+++|+++|.||++.+.+.++.
T Consensus 187 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~ 266 (459)
T PRK05965 187 NPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGP 266 (459)
T ss_pred cccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCch
Confidence 111 1221 1 24567777655666677654 389999999999999997655543
Q ss_pred CCC-----CCCcEEEecCccccCCCC-ceEEEEEEeCHHHHHHHHH-------HHhhccCcCChHHHHHHHHHHHhhhCC
Q 012785 272 TYP-----ADHDLMLFTVSKSTGHAG-TRIGWALVKDMEVAKKMTK-------YIELNTIGVSKDSQLRAAKVLKVVSDS 338 (456)
Q Consensus 272 ~~~-----~~~~i~i~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~-------~~~~~~~~~s~~~q~~a~~~L~~~~~~ 338 (456)
... -..+|+ +++|.++ .| +++|.++++ +++.+.+.. .....|++.++++..++.+.|+.+++.
T Consensus 267 ~~a~~~~gv~PDiv--~~gKgl~-gG~~Pi~av~~~-~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~ 342 (459)
T PRK05965 267 LFACEAEGVVPDLM--TVAKGLT-SGYVPMGAVLMS-DHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEG 342 (459)
T ss_pred hhhHhhcCCCCCeE--Eechhhc-cCCcceeEEEEc-HHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 211 123444 4799998 89 599999997 899887753 234568899999999999999877553
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh---cCCccccCCCCcccccccccCCCCCceEEeecCc-----------
Q 012785 339 CKPSGSEDECFFEFTNHQMSTRWKQLRMAVQK---SGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----------- 404 (456)
Q Consensus 339 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----------- 404 (456)
+.++ +.++.-+.+.+.|++ .+.+.-.+..|.+ +-+.+..
T Consensus 343 ---------~l~~----~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~--------------~gie~~~~~~~~~~~~~~ 395 (459)
T PRK05965 343 ---------GLLA----NGQKAGPRFAAGLDALRAHPLVGDVRGRGLL--------------GALELVADKATKTPFDAA 395 (459)
T ss_pred ---------cHHH----HHHHHHHHHHHHHHhhccCCCEEEEeecceE--------------EEEEEeccccccCCCCch
Confidence 2333 334444444444443 3333333444443 3333310
Q ss_pred --cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhh
Q 012785 405 --EIEDCESFLKGNKILTRSGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 405 --~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l 455 (456)
....+...+.++||++++. +.+.+|+. +..+++++++++++|.+.+
T Consensus 396 ~~~~~~i~~~~~~~Gll~~~~-----g~~~i~~~PpL~it~~ei~~~~~~l~~~l 445 (459)
T PRK05965 396 LDPADRIFDRAYANGLVFRAF-----GDGVLGFAPALCCTEGEFDLIFERTRKTL 445 (459)
T ss_pred hHHHHHHHHHHHhCCeEEEec-----CCcEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 1245667788999999862 25678888 4359999999999998876
No 269
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.67 E-value=5.6e-15 Score=139.78 Aligned_cols=308 Identities=15% Similarity=0.136 Sum_probs=201.4
Q ss_pred hcCCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEc
Q 012785 90 QDGGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVG 169 (456)
Q Consensus 90 ~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t 169 (456)
...+.-.+.+|+++|+.... +.++ +..-|+....|..+. ..+|.++++..+.. +-..++++
T Consensus 55 ~f~Gi~tvslGHchP~v~~a--~~kQ-----l~~l~H~t~~~~~~p------i~~~Ae~L~s~~P~------~l~~vfF~ 115 (442)
T KOG1404|consen 55 AFGGIVTVSLGHCHPDVVAA--AVKQ-----LKKLYHTTSGYLNPP------IHDLAEALVSKLPG------DLKVVFFV 115 (442)
T ss_pred hhCCeEEEEcCCCChHHHHH--HHHh-----hhhhEEeeccccCCc------HHHHHHHHHHhCCC------CceEEEEe
Confidence 35666778999999987644 3332 222244333454443 37888888888732 33568999
Q ss_pred cCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhc-CCeEee----------------------eccC----
Q 012785 170 TGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCV-KSRLYK----------------------WAGD---- 221 (456)
Q Consensus 170 ~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~-g~~~~~----------------------~~~d---- 221 (456)
|+++||.++++..... .|.- .|+.-.-+|++....+..+ |..... |..+
T Consensus 116 nsGsEANelal~mar~Yt~~~---diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e 192 (442)
T KOG1404|consen 116 NSGSEANELALKMARLYTGNL---DIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEE 192 (442)
T ss_pred cCCchHHHHHHHHHHHhcCCc---eEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhh
Confidence 9999999999987643 2221 6888889999877665443 222111 1111
Q ss_pred -c----ccccc-------CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcE
Q 012785 222 -A----KRFNK-------DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT-YPADHDL 279 (456)
Q Consensus 222 -~----~~l~~-------~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i 279 (456)
- +.++. .+..+.+...-+.--|.+-. ++|+++|.+.|.||++.+.++++-. .-..+.+
T Consensus 193 ~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v 272 (442)
T KOG1404|consen 193 ASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGV 272 (442)
T ss_pred hHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCC
Confidence 0 01110 13344455444555565533 3899999999999999987766622 2222344
Q ss_pred E--EecCccccCCCCceEEEEEEeCHHHHHHHHHHH-hhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHH
Q 012785 280 M--LFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYI-ELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQ 356 (456)
Q Consensus 280 ~--i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~-~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~ 356 (456)
+ |-|++|.+| .|+.+|.++.. +++++.+.+.. .++|++.+|++..++.++|+.+.+. ++.+.
T Consensus 273 ~PDIvTmAKgiG-nG~Pl~AVvtt-~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee-------------~LqE~ 337 (442)
T KOG1404|consen 273 VPDIVTMAKGIG-NGFPLGAVVTT-PEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEE-------------NLQEN 337 (442)
T ss_pred CccHHHHHhhcc-CCCcceeeecC-HHHHHHHHhccccccccCCCchhHHHHHHHHHHHHHH-------------hHHHH
Confidence 4 889999999 99999999996 99999998886 7889999999999999999976543 23334
Q ss_pred HHHHHHHHHHHHHhc----CCccccCCCCcccccccccCCCCCceEEeec---C-c-------cHHHHHHHHHhCCEEee
Q 012785 357 MSTRWKQLRMAVQKS----GLFSVPELPSQFCTFLGRAFEPQPAFAWLKC---E-Q-------EIEDCESFLKGNKILTR 421 (456)
Q Consensus 357 ~~~~~~~l~~~L~~~----~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~---~-~-------~~~~~~~~l~~~gI~v~ 421 (456)
.++...+|.+.|.++ +.+--.+..|.+ +-+++ + + ....+.+.++++|++|-
T Consensus 338 aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm--------------~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg 403 (442)
T KOG1404|consen 338 AAEVGSYLLEKLAALKDKHPIIGDVRGRGLM--------------LGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVG 403 (442)
T ss_pred HHHHHHHHHHHHHHHhhcCCceeecccceeE--------------EEEEEecccCCCCCcchHHHHHHHHHHHHhCeeee
Confidence 444445555555443 333334445543 44443 1 1 23557788999999997
Q ss_pred cCCCCCCCCCeEEEE--ecCChhHHHHHHHHH
Q 012785 422 SGKHFGFSPKYVRIS--MLDRDENYNLFVQRL 451 (456)
Q Consensus 422 pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L 451 (456)
-|..+|. .+||+ ++.++|+++.+++..
T Consensus 404 ~g~i~G~---vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 404 KGGIHGN---VFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred cccccce---EEEecCCeeccHHHHHHHHHHH
Confidence 7766654 89998 445999997666643
No 270
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.67 E-value=3.8e-15 Score=151.83 Aligned_cols=255 Identities=11% Similarity=0.022 Sum_probs=165.0
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-------CCCCCCcEEEEeCCCCCChhhhhhhcC---------------CeEeeecc-
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-------QDASEPISVVSAAPYYSSYPSITDCVK---------------SRLYKWAG- 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-------~gd~~~~~Vlv~~P~y~~~~~~~~~~g---------------~~~~~~~~- 220 (456)
+.+++++++++|++.+++.... ++.. +|+...-+|++....+.... ...++++.
T Consensus 115 ~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~---~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~ 191 (453)
T PRK06943 115 GHAFFASDGASAVEIALKMSFHAWRNRGRGDKR---EFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDA 191 (453)
T ss_pred CEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCC---EEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCc
Confidence 5899999999999999997632 2222 89999999999764333221 11111111
Q ss_pred ---------------Cccccc------cCCCeEEEEcC-CCCCCcccch---------HHhhhcCcEEEeeecCCCCCCC
Q 012785 221 ---------------DAKRFN------KDGPYIELVTS-PNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYT 269 (456)
Q Consensus 221 ---------------d~~~l~------~~~~~~i~v~~-P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~ 269 (456)
|.+.++ ..+..+|++.. .+.-.|...+ ++|+++|+++|.||++.+.+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRt 271 (453)
T PRK06943 192 RGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRT 271 (453)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCC
Confidence 012222 12456777754 2666677654 3899999999999999976555
Q ss_pred CCCC-----CCCCcEEEecCccccCCCC-ceEEEEEEeCHHHHHHHHHH------HhhccCcCChHHHHHHHHHHHhhhC
Q 012785 270 SITY-----PADHDLMLFTVSKSTGHAG-TRIGWALVKDMEVAKKMTKY------IELNTIGVSKDSQLRAAKVLKVVSD 337 (456)
Q Consensus 270 ~~~~-----~~~~~i~i~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~~------~~~~~~~~s~~~q~~a~~~L~~~~~ 337 (456)
+... .-..+|+ +++|.++ .| +++|.++++ +++.+.+... ....|++.++++..++.+.|+.+.+
T Consensus 272 G~~fa~~~~gv~PDiv--t~gKgl~-gG~~Pi~av~~~-~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~ 347 (453)
T PRK06943 272 GTFFACEQAGVWPDFL--CLSKGIS-GGYLPLSLVLSR-DAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAE 347 (453)
T ss_pred cchhHHHhCCCCCCeE--eeehhhc-cCcccceEEEEc-HHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 4321 1123444 4699999 89 599999997 8888877531 2446888999999999999997755
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC---c----cHHHHH
Q 012785 338 SCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE---Q----EIEDCE 410 (456)
Q Consensus 338 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~---~----~~~~~~ 410 (456)
. +.+++..+.-+..++.|.+. .+.+.+.-.+..|.+ +-+.+. + ....+.
T Consensus 348 ~---------~l~~~~~~~G~~l~~~L~~l-~~~~~v~~vrG~Gl~--------------~gvel~~~~~~~~~~~~~i~ 403 (453)
T PRK06943 348 D---------DVLARNARKSARLRAALAPL-AAHPQVRHLRQRGTI--------------FAFDVALDGDAARTFSRRFF 403 (453)
T ss_pred c---------CHHHHHHHHHHHHHHHHHHH-hcCCCEEeEeccccE--------------EEEEEccCCCcchHHHHHHH
Confidence 3 33444433333333333332 223333333444443 444442 1 134566
Q ss_pred HHHHhCCEEeecCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhh
Q 012785 411 SFLKGNKILTRSGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 411 ~~l~~~gI~v~pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l 455 (456)
..+.++||++.+. .+.+|++ +..+++++++++++|.+.|
T Consensus 404 ~~~~~~Gll~~~~------g~~l~~~Ppl~it~~eid~~~~~l~~al 444 (453)
T PRK06943 404 EAALERELLLRPI------GTTVYLMPPYVLDDDEIAWLAERTRATL 444 (453)
T ss_pred HHHHHCCcEEEec------CCEEEEeCCCcCCHHHHHHHHHHHHHHH
Confidence 7788999999872 2468998 6569999999999998876
No 271
>PRK07481 hypothetical protein; Provisional
Probab=99.67 E-value=8.9e-15 Score=149.23 Aligned_cols=256 Identities=14% Similarity=0.107 Sum_probs=162.5
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-------CCCCCCcEEEEeCCCCCChhhhhhhcC---------------CeEeeec--
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-------QDASEPISVVSAAPYYSSYPSITDCVK---------------SRLYKWA-- 219 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-------~gd~~~~~Vlv~~P~y~~~~~~~~~~g---------------~~~~~~~-- 219 (456)
++++++++++||++.+++.... ++.. +|+...-+|++....+.... ...+..+
T Consensus 105 ~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~---~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~ 181 (449)
T PRK07481 105 RRVFFSSGGSDSVETALKLARQYWKVRGQPERT---KFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWL 181 (449)
T ss_pred CEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCc---EEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcc
Confidence 5899999999999999997643 2222 79999999999765433321 1111111
Q ss_pred ----c---Ccccc--------c-------cCCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCC
Q 012785 220 ----G---DAKRF--------N-------KDGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQY 268 (456)
Q Consensus 220 ----~---d~~~l--------~-------~~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~ 268 (456)
. |.+.+ + .+++.+|++...+.-.|...+ ++|+++|+++|.||++.+.+.
T Consensus 182 ~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGR 261 (449)
T PRK07481 182 YRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGR 261 (449)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCc
Confidence 1 22211 1 134567777555655566544 389999999999999997654
Q ss_pred CCCCC-----CCCCcEEEecCccccCCCC-ceEEEEEEeCHHHHHHHHHH-------HhhccCcCChHHHHHHHHHHHhh
Q 012785 269 TSITY-----PADHDLMLFTVSKSTGHAG-TRIGWALVKDMEVAKKMTKY-------IELNTIGVSKDSQLRAAKVLKVV 335 (456)
Q Consensus 269 ~~~~~-----~~~~~i~i~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~~-------~~~~~~~~s~~~q~~a~~~L~~~ 335 (456)
++... .-..+| .+++|.++ .| +.+|.++++ +++++.+... .+..|++.++++..++.+.|+.+
T Consensus 262 tG~~~a~~~~gv~PDi--v~~gKgl~-gG~~Pi~av~~~-~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l 337 (449)
T PRK07481 262 TGSWFGSRGWGVKPDI--MCLAKGIT-SGYVPLGATMVN-ARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIV 337 (449)
T ss_pred CchhhHhhhcCCCCCE--EEEeeccc-CCCcCceEEEEc-HHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHH
Confidence 44211 112233 45799998 78 599999997 8888887532 34468899999999999999876
Q ss_pred hCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-----------
Q 012785 336 SDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----------- 404 (456)
Q Consensus 336 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----------- 404 (456)
.+. +.+++.++.-+..++.|.+..++++.+.-.+..|.+ +.+.+..
T Consensus 338 ~~~---------~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm--------------~gi~l~~~~~~~~~~~~~ 394 (449)
T PRK07481 338 VRE---------DLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLM--------------LALDLVADKATREPIDPS 394 (449)
T ss_pred Hhh---------hHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceE--------------EEEEecccccccCCCCch
Confidence 543 233333333333333333332333433334444544 3444310
Q ss_pred --cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhh
Q 012785 405 --EIEDCESFLKGNKILTRSGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 405 --~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l 455 (456)
....+...+.++||++.+. .+.+||+ +..+++++++++++|.+.+
T Consensus 395 ~~~~~~~~~~~~~~Gvl~~~~------g~~i~l~Ppl~it~~eid~~~~~l~~~l 443 (449)
T PRK07481 395 KGYANAVADVARENGVLVRPS------GTKIILSPPLVIQREDVDRIVDALDAGL 443 (449)
T ss_pred hHHHHHHHHHHHhCCeEEEec------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 1234667788999999873 2358888 4459999999999998876
No 272
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.66 E-value=7.4e-15 Score=149.44 Aligned_cols=251 Identities=12% Similarity=0.036 Sum_probs=161.3
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhc-CC---------------eEeeecc------
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCV-KS---------------RLYKWAG------ 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~-g~---------------~~~~~~~------ 220 (456)
+.++++++++||++.+++.... .|.. +|+...-+|++....+... +. ..++++.
T Consensus 116 ~~v~f~~SGsEA~e~AlklAr~~tgr~---~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (441)
T PRK05769 116 KKVFFTNSGTESNEAAIKIARYHTGRK---YIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPW 192 (441)
T ss_pred CEEEECCchHHHHHHHHHHHHHHhCCC---eEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccc
Confidence 5899999999999999986643 2321 8999999999987554432 11 1111110
Q ss_pred ---Cc--------cccc---------cCCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCC
Q 012785 221 ---DA--------KRFN---------KDGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSI 271 (456)
Q Consensus 221 ---d~--------~~l~---------~~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~ 271 (456)
|. +.++ ..+..+|++...+.-.|...+ ++|+++|+++|.||++.+...++.
T Consensus 193 ~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~ 272 (441)
T PRK05769 193 GIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGK 272 (441)
T ss_pred cCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc
Confidence 00 1121 124566666544555676655 389999999999999986433331
Q ss_pred C---C--CCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcc
Q 012785 272 T---Y--PADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSED 346 (456)
Q Consensus 272 ~---~--~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~ 346 (456)
. . .-..+++ +|||.++ .|+++|+++++ +++.+.+ ......+++.+++++.++.+.|+.+.
T Consensus 273 ~~a~~~~gv~pDiv--t~~K~l~-~G~p~gav~~~-~~i~~~~-~~~~~~T~~g~p~~~aaa~a~L~~l~---------- 337 (441)
T PRK05769 273 MFAIEHFGVEPDII--TLAKAIA-GGLPLGAVIGR-AELMFLP-PGSHANTFGGNPVAAAAALATLEELE---------- 337 (441)
T ss_pred eehhhccCCCCCEE--EEccccc-CCcccEEEEEe-hhhhhcC-CCCCCCCCCcCHHHHHHHHHHHHHHH----------
Confidence 1 0 1122343 6899999 89999999997 7776533 22344677889999999999998532
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhc----CCccccCCCCcccccccccCCCCCceEEeecCc--------cHHHHHHHHH
Q 012785 347 ECFFEFTNHQMSTRWKQLRMAVQKS----GLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--------EIEDCESFLK 414 (456)
Q Consensus 347 ~~~l~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--------~~~~~~~~l~ 414 (456)
+ ...++++++-+++.+.|+++ +.+.-.+..|.+ +-+.+.. ....+.+.+.
T Consensus 338 -~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~--------------~~i~~~~~~~~~~~~~~~~~~~~~~ 399 (441)
T PRK05769 338 -E---GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLM--------------IGVELVKDRKEPDPKLRDKVLYEAF 399 (441)
T ss_pred -H---HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEE--------------EEEEeccCCccccHHHHHHHHHHHH
Confidence 1 34555556666666666543 322222333333 3334411 1345667778
Q ss_pred hCCEEeecCCCCCCCCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 415 GNKILTRSGKHFGFSPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 415 ~~gI~v~pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
++||++.+. +.+.+|++... +++++++++++|.+++
T Consensus 400 ~~Gil~~~~-----~~~~lr~~p~l~~t~~~id~~~~~l~~~l 437 (441)
T PRK05769 400 KRGLLLLGA-----GKSAIRIIPPLIITEEEADIGLEILEEAI 437 (441)
T ss_pred hCCcEEecC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 999999762 24678998654 9999999999998876
No 273
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.66 E-value=9.2e-15 Score=150.50 Aligned_cols=255 Identities=11% Similarity=0.064 Sum_probs=161.9
Q ss_pred ceEEEccCHHHHHHHHHHHhcC----CCCCCCcEEEEeCCCCCChhhhhhh-cCCe--------------Eeeec-----
Q 012785 164 HHIVVGTGSTQLFQAALYALSS----QDASEPISVVSAAPYYSSYPSITDC-VKSR--------------LYKWA----- 219 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~----~gd~~~~~Vlv~~P~y~~~~~~~~~-~g~~--------------~~~~~----- 219 (456)
+.+++++++++|++.+++.... .|.....+|+..+-+|++....... .|.. ..+.+
T Consensus 152 ~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~ 231 (504)
T PLN02760 152 GKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRF 231 (504)
T ss_pred CEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCccccc
Confidence 4799999999999999998741 1210011899999999998654432 2211 01110
Q ss_pred ---c------------Cccc-cc---cCCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCC
Q 012785 220 ---G------------DAKR-FN---KDGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSI 271 (456)
Q Consensus 220 ---~------------d~~~-l~---~~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~ 271 (456)
. +.+. +. ..+..+|++..-+.-.|.+.+ ++|+++|+++|.||++.+.+.++.
T Consensus 232 ~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~ 311 (504)
T PLN02760 232 HLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGT 311 (504)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccch
Confidence 0 0111 11 123556666555665676655 389999999999999986544432
Q ss_pred CC-----CCCCcEEEecCccccCCCC-ceEEEEEEeCHHHHHHHHHH-------HhhccCcCChHHHHHHHHHHHhhhCC
Q 012785 272 TY-----PADHDLMLFTVSKSTGHAG-TRIGWALVKDMEVAKKMTKY-------IELNTIGVSKDSQLRAAKVLKVVSDS 338 (456)
Q Consensus 272 ~~-----~~~~~i~i~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~~-------~~~~~~~~s~~~q~~a~~~L~~~~~~ 338 (456)
.. .-..+ +.+|+|.+| .| +++|.++++ +++++.+... .+..+++.++++..++.+.|+.+.+.
T Consensus 312 ~~a~e~~gv~PD--ivtlgK~lg-gG~~PigAv~~~-~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~ 387 (504)
T PLN02760 312 MFGCDKYNIKPD--LVSLAKALS-SAYMPIGAVLVS-PEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKER 387 (504)
T ss_pred hhHHHhcCCCCc--EEEeccccc-CCccccceEeec-HHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 11 01122 677999998 67 599999996 8998887642 34468899999999999999976543
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh---cCCccccCCCCcccccccccCCCCCceEEeecCc--c--------
Q 012785 339 CKPSGSEDECFFEFTNHQMSTRWKQLRMAVQK---SGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--E-------- 405 (456)
Q Consensus 339 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~-------- 405 (456)
+. .++.+++-+.+.+.|++ .+.+.-.+..|.+ +-+.+.. .
T Consensus 388 ---------~l----~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~--------------~gie~~~~~~~~~~~~~~ 440 (504)
T PLN02760 388 ---------NI----PEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLI--------------LGTEFVDNKSPNDPFPAE 440 (504)
T ss_pred ---------CH----HHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceE--------------EEEEEecCCcccccccch
Confidence 22 33344444444444433 3333223334443 3443311 0
Q ss_pred ---HHHHHHHHHhCCEEeecCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhh
Q 012785 406 ---IEDCESFLKGNKILTRSGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 406 ---~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l 455 (456)
...+.+.+.++||.+.+. .+.+|++ +..+++++++++++|.+++
T Consensus 441 ~~~~~~i~~~~~~~Gvl~~~~------g~~lrl~Ppl~it~eeid~~~~~l~~al 489 (504)
T PLN02760 441 WGVGAYFGAECKKRGMLVRVA------GDNIMMSPPLIITPEEVDELISIYGKAL 489 (504)
T ss_pred hHHHHHHHHHHHhCCcEEEec------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 334667788999999872 2568999 4469999999999998876
No 274
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.66 E-value=6.7e-15 Score=149.84 Aligned_cols=255 Identities=11% Similarity=0.049 Sum_probs=163.7
Q ss_pred ceEEEccCHHHHHHHHHHHhcCC----CCCCCcEEEEeCCCCCChhhhhhhcC---------------CeEeeeccC---
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQ----DASEPISVVSAAPYYSSYPSITDCVK---------------SRLYKWAGD--- 221 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~----gd~~~~~Vlv~~P~y~~~~~~~~~~g---------------~~~~~~~~d--- 221 (456)
+.+++++++++|++.+++..... |.....+|+...-+|++....+.... ...++++.+
T Consensus 110 ~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (445)
T PRK09221 110 DHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPE 189 (445)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccc
Confidence 58999999999999999876421 21111179999999998765433221 111111110
Q ss_pred --------------cccc----cc---CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCC
Q 012785 222 --------------AKRF----NK---DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSI 271 (456)
Q Consensus 222 --------------~~~l----~~---~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~ 271 (456)
.+.+ +. .+..+|++..-+.-.|...+ ++|+++|+++|.||++.+.+.++.
T Consensus 190 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~ 269 (445)
T PRK09221 190 NAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGA 269 (445)
T ss_pred cccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCch
Confidence 0112 11 24456666555666677655 389999999999999986544332
Q ss_pred CC-----CCCCcEEEecCccccCCCC-ceEEEEEEeCHHHHHHHHH-------HHhhccCcCChHHHHHHHHHHHhhhCC
Q 012785 272 TY-----PADHDLMLFTVSKSTGHAG-TRIGWALVKDMEVAKKMTK-------YIELNTIGVSKDSQLRAAKVLKVVSDS 338 (456)
Q Consensus 272 ~~-----~~~~~i~i~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~-------~~~~~~~~~s~~~q~~a~~~L~~~~~~ 338 (456)
.. .-..+ +.+++|.++ .| +++|.++++ +++++.+.. .....+++.++++..++.+.|+.+.+.
T Consensus 270 ~~~~~~~gv~PD--i~~~gK~l~-gG~~Pi~av~~~-~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~ 345 (445)
T PRK09221 270 AFAAERFGVTPD--IITFAKGLT-NGAIPMGAVIAS-DEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREE 345 (445)
T ss_pred hhHHHhcCCCCC--EEEeccccc-cCcccceeeEEc-HHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhc
Confidence 11 11123 457999998 66 789999996 888887753 123358889999999999999866442
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhc---CCccccCCCCcccccccccCCCCCceEEeecCc-------cHHH
Q 012785 339 CKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKS---GLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-------EIED 408 (456)
Q Consensus 339 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-------~~~~ 408 (456)
...++.++..+++.+.|+++ +.+.-.+..|. +.-+.+.. ....
T Consensus 346 -------------~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl--------------~~~v~~~~~~~~~~~~~~~ 398 (445)
T PRK09221 346 -------------DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGL--------------VAGIELAPRPGAPGARGYE 398 (445)
T ss_pred -------------cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCce--------------EEEEEEecccccccchHHH
Confidence 23455666666677766654 22222223333 23333311 1245
Q ss_pred HHHHHHhCCEEeecCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhh
Q 012785 409 CESFLKGNKILTRSGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 409 ~~~~l~~~gI~v~pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l 455 (456)
+.+.+.++||.++++ .+.+|++ +..+++++++++++|++.+
T Consensus 399 ~~~~~~~~Gv~~~~~------~~~lr~~Ppl~~t~~eid~~~~~l~~~l 441 (445)
T PRK09221 399 AFMKCFEKGLLVRYT------GDTIALSPPLIIEKAQIDELVDALGDAL 441 (445)
T ss_pred HHHHHHHCCeEEeec------CCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 677888999999863 3579999 4459999999999999876
No 275
>PRK06062 hypothetical protein; Provisional
Probab=99.65 E-value=9.4e-15 Score=149.03 Aligned_cols=256 Identities=13% Similarity=0.031 Sum_probs=161.3
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhcCC--------------eEeeec---------
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCVKS--------------RLYKWA--------- 219 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~g~--------------~~~~~~--------- 219 (456)
+.+++++++++|.+.+++.... .|.. +|+...-+|++....+..... ..+.++
T Consensus 113 ~~v~f~~SGsEAve~AlklAr~~tgr~---~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 189 (451)
T PRK06062 113 SKVFFTNGGADANEHAVRMARLHTGRP---KVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHA 189 (451)
T ss_pred CEEEEcCChHHHHHHHHHHHHHhhCCc---eEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCC
Confidence 5899999999999999987643 2321 899999999998755543311 111111
Q ss_pred -cC-------ccccc-------cCCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC---
Q 012785 220 -GD-------AKRFN-------KDGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT--- 272 (456)
Q Consensus 220 -~d-------~~~l~-------~~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~--- 272 (456)
.| .+.++ ..+..+|++..-+.-.|.+.+ ++|+++|+++|.||++.+.+.++..
T Consensus 190 ~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~ 269 (451)
T PRK06062 190 TTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAI 269 (451)
T ss_pred CChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHH
Confidence 01 11111 123456666544555566654 3899999999999999875444321
Q ss_pred C--CCCCcEEEecCccccCCCCc-eEEEEEEeCHHHHHHHHHH--HhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcch
Q 012785 273 Y--PADHDLMLFTVSKSTGHAGT-RIGWALVKDMEVAKKMTKY--IELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDE 347 (456)
Q Consensus 273 ~--~~~~~i~i~S~SK~~g~~G~-RiG~l~~~~~~~~~~l~~~--~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~ 347 (456)
. .-..+ +.+|+|.+| .|. .+|.+++. +++++.+... ....+++.++++..++.+.|+.+.+.
T Consensus 270 ~~~gv~PD--i~t~gK~lg-gG~~Pigav~~~-~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~--------- 336 (451)
T PRK06062 270 EHFGVVPD--LITFAKGVN-SGYVPLGGVAIS-EAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEE--------- 336 (451)
T ss_pred HhcCCCCC--eeeechhhh-cCCcCcEEEEEc-HHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhc---------
Confidence 1 11223 557999998 784 99999997 8888887532 24458889999999999999876543
Q ss_pred hHHHHHHHHH-HHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc----------------cHHHHH
Q 012785 348 CFFEFTNHQM-STRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----------------EIEDCE 410 (456)
Q Consensus 348 ~~l~~~~~~~-~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----------------~~~~~~ 410 (456)
+.+++..+.- +..++.|.+..++.+.+.-.+..|.+ +-+.+.. ....+.
T Consensus 337 ~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~--------------~gve~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (451)
T PRK06062 337 GIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVF--------------WALELVADRETREPLAPYGASSAAMAAVK 402 (451)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccE--------------EEEEEcccccccCCCcccchhhHHHHHHH
Confidence 2333322221 12223333333333433233444443 2333210 134577
Q ss_pred HHHHhCCEEeecCCCCCCCCCeEEEEe--cCChhHHHHHHHHHHhhh
Q 012785 411 SFLKGNKILTRSGKHFGFSPKYVRISM--LDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 411 ~~l~~~gI~v~pg~~fg~~~~~iRis~--~~~~e~i~~~l~~L~~~l 455 (456)
..+.++||++.+. .+.+|++. ..+++++++++++|.+++
T Consensus 403 ~~l~~~Gvl~~~~------~~~lrl~ppl~~t~~eid~~~~~l~~~l 443 (451)
T PRK06062 403 AACKERGLLPFVN------GNRIHVVPPCTVTEDEVREGLAILDAAL 443 (451)
T ss_pred HHHHHCCcEEeec------CCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 7888999998751 45789875 349999999999998876
No 276
>PRK07483 hypothetical protein; Provisional
Probab=99.65 E-value=1.5e-14 Score=147.27 Aligned_cols=265 Identities=14% Similarity=0.100 Sum_probs=166.4
Q ss_pred ceEEEccCHHHHHHHHHHHhcCC----CCCCCcEEEEeCCCCCChhhhhhhcCC---------------eEeeecc---C
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQ----DASEPISVVSAAPYYSSYPSITDCVKS---------------RLYKWAG---D 221 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~----gd~~~~~Vlv~~P~y~~~~~~~~~~g~---------------~~~~~~~---d 221 (456)
+++++++++++|++.+++..... |.....+|+...-+|++....+..... ..++.+. +
T Consensus 91 ~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~ 170 (443)
T PRK07483 91 EHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYRE 170 (443)
T ss_pred CEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccc
Confidence 58999999999999999876431 111111799999999998654443211 0111100 1
Q ss_pred c--------------ccccc-------CCCeEEEEcCCCC-CCcccch---------HHhhhcCcEEEeeecCCCCCCCC
Q 012785 222 A--------------KRFNK-------DGPYIELVTSPNN-PDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTS 270 (456)
Q Consensus 222 ~--------------~~l~~-------~~~~~i~v~~P~N-PtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~ 270 (456)
. +.++. ++..+|++..-+. -.|...+ ++|+++|+++|.||++.+.+.++
T Consensus 171 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG 250 (443)
T PRK07483 171 QRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTG 250 (443)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCc
Confidence 0 12221 2456676654453 2355443 38999999999999998765544
Q ss_pred CCC-----CCCCcEEEecCccccCCCCc-eEEEEEEeCHHHHHHHHHH----HhhccCcCChHHHHHHHHHHHhhhCCCC
Q 012785 271 ITY-----PADHDLMLFTVSKSTGHAGT-RIGWALVKDMEVAKKMTKY----IELNTIGVSKDSQLRAAKVLKVVSDSCK 340 (456)
Q Consensus 271 ~~~-----~~~~~i~i~S~SK~~g~~G~-RiG~l~~~~~~~~~~l~~~----~~~~~~~~s~~~q~~a~~~L~~~~~~~~ 340 (456)
... .-..+ +.+++|.++ .|+ ++|.++++ +++.+.+... .+..|++.++++..++.+.|+.+++.
T Consensus 251 ~~~a~~~~gv~PD--iv~~gK~l~-gG~~Pi~av~~~-~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~-- 324 (443)
T PRK07483 251 TLFACEEDGVAPD--LVTIAKGLG-AGYQPIGAVLAS-DRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAED-- 324 (443)
T ss_pred HHHHHhhcCCCCC--eeeehhhhc-cCccccEEEEEc-HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc--
Confidence 211 11223 445799998 896 99999997 8888877542 24468999999999999999877553
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-------------cHH
Q 012785 341 PSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-------------EIE 407 (456)
Q Consensus 341 ~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-------------~~~ 407 (456)
+.+++.++.-+..++.|.+.+++++.+.-.+..|.+ +-+.+.. ..+
T Consensus 325 -------~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm--------------~gie~~~~~~~~~~~~~~~~~~~ 383 (443)
T PRK07483 325 -------GLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLF--------------VGVELVADRATKAPFDPALKLHA 383 (443)
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccE--------------EEEEEeecccccCCCCchhhHHH
Confidence 333444433333334444444444544344555554 3333310 124
Q ss_pred HHHHHHHhCCEEeecCCC-C-CCCCCeEEEE--ecCChhHHHHHHHHHHhhh
Q 012785 408 DCESFLKGNKILTRSGKH-F-GFSPKYVRIS--MLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 408 ~~~~~l~~~gI~v~pg~~-f-g~~~~~iRis--~~~~~e~i~~~l~~L~~~l 455 (456)
.+.+.+.++||++.+... . +...+.+|+. +..+++++++++++|.+.|
T Consensus 384 ~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l 435 (443)
T PRK07483 384 RIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAI 435 (443)
T ss_pred HHHHHHHHCCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 567788899999987421 1 2224689987 4459999999999998876
No 277
>PRK06105 aminotransferase; Provisional
Probab=99.65 E-value=1.2e-14 Score=148.73 Aligned_cols=258 Identities=10% Similarity=0.027 Sum_probs=161.4
Q ss_pred ceEEEccCHHHHHHHHHHHhcC----CCCCCCcEEEEeCCCCCChhhhhhhcCC---------------eEeeecc----
Q 012785 164 HHIVVGTGSTQLFQAALYALSS----QDASEPISVVSAAPYYSSYPSITDCVKS---------------RLYKWAG---- 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~----~gd~~~~~Vlv~~P~y~~~~~~~~~~g~---------------~~~~~~~---- 220 (456)
+++++++++++|++.+++.... .+.....+|+...-+|++....+..... ..++++.
T Consensus 110 ~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~ 189 (460)
T PRK06105 110 SKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRF 189 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCccccc
Confidence 5899999999999999997531 1110111899999999987754432211 1111110
Q ss_pred ----------------Cccc-cc---cCCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCC
Q 012785 221 ----------------DAKR-FN---KDGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSI 271 (456)
Q Consensus 221 ----------------d~~~-l~---~~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~ 271 (456)
|.+. +. ..+..+|++..-+.-.|...+ ++|+++|+++|.||++.+.+.++-
T Consensus 190 ~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~ 269 (460)
T PRK06105 190 GLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGN 269 (460)
T ss_pred ccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCch
Confidence 0111 11 124567777555665676644 389999999999999986544431
Q ss_pred CC-----CCCCcEEEecCccccCCCC-ceEEEEEEeCHHHHHHHHHH-------HhhccCcCChHHHHHHHHHHHhhhCC
Q 012785 272 TY-----PADHDLMLFTVSKSTGHAG-TRIGWALVKDMEVAKKMTKY-------IELNTIGVSKDSQLRAAKVLKVVSDS 338 (456)
Q Consensus 272 ~~-----~~~~~i~i~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~~-------~~~~~~~~s~~~q~~a~~~L~~~~~~ 338 (456)
.. .-..+ +.+|+|.++ .| +.+|.++++ +++.+.+... .+..|++.++++..++.+.|+.+.+.
T Consensus 270 ~f~~~~~~v~PD--i~~~gK~lg-gG~~P~~av~~~-~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~ 345 (460)
T PRK06105 270 MFGCETFGIKPD--ILVMSKQLS-SSYQPLSAVLMN-EKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEER 345 (460)
T ss_pred hhhHHhcCCCCC--eeeeecccc-cCcccceEEEEc-HHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 10 11123 457999998 67 699999997 8888877542 13468899999999999999977653
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC-c------------c
Q 012785 339 CKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE-Q------------E 405 (456)
Q Consensus 339 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~-~------------~ 405 (456)
+.+++.++.-+..++.|.+. ++++.+.-.+..|.+ .-+++. + .
T Consensus 346 ---------~l~~~v~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~--------------~gie~~~~~~~~~~~~~~~~~ 401 (460)
T PRK06105 346 ---------DLVGNAAERGARLQARLRAL-ADHPLVGEVRGVGLI--------------AAVELVADKATKTPFEPPGKV 401 (460)
T ss_pred ---------cHHHHHHHHHHHHHHHHHHh-hcCCCeEEEEecceE--------------EEEEEecCcccCCCCCchhHH
Confidence 23333333333333333332 334433334444543 333331 0 0
Q ss_pred HHHHHHHHHhCCEEeecCCCCCCCCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 406 IEDCESFLKGNKILTRSGKHFGFSPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 406 ~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
...+...+.++||++.+. .+.+|++-. .+++++++++++|.+++
T Consensus 402 a~~i~~~~~~~Gvl~~~~------g~~i~l~Ppl~it~~eid~~~~~l~~~l 447 (460)
T PRK06105 402 GARANAAAHEHGVISRAM------GDTLAFCPPLIITAAQVDEMVDRFGRAL 447 (460)
T ss_pred HHHHHHHHHHCCeEEEec------CCEEEEECCCccCHHHHHHHHHHHHHHH
Confidence 245667788999999872 357898844 49999999999998876
No 278
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.65 E-value=1.8e-14 Score=146.58 Aligned_cols=255 Identities=11% Similarity=0.036 Sum_probs=160.8
Q ss_pred ceEEEccCHHHHHHHHHHHhcCC----CCCCCcEEEEeCCCCCChhhhhhhcC---------------CeEeeeccC---
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQ----DASEPISVVSAAPYYSSYPSITDCVK---------------SRLYKWAGD--- 221 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~----gd~~~~~Vlv~~P~y~~~~~~~~~~g---------------~~~~~~~~d--- 221 (456)
+.++++++++||++.+++..... |.....+|+...-+|++....+.... ...++++.+
T Consensus 107 ~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~ 186 (442)
T PRK13360 107 NHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLAR 186 (442)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhc
Confidence 58999999999999999875421 11001189999999999765432211 111122211
Q ss_pred --------------ccccc-------cCCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCC
Q 012785 222 --------------AKRFN-------KDGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSI 271 (456)
Q Consensus 222 --------------~~~l~-------~~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~ 271 (456)
.+.++ ..+..+|++...+.-.|...+ ++|+++|+++|.||++.+.+.++-
T Consensus 187 ~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~ 266 (442)
T PRK13360 187 NAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGA 266 (442)
T ss_pred cccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc
Confidence 11221 123456666555665676654 389999999999999976544332
Q ss_pred CC-----CCCCcEEEecCccccCCCC-ceEEEEEEeCHHHHHHHHHH-------HhhccCcCChHHHHHHHHHHHhhhCC
Q 012785 272 TY-----PADHDLMLFTVSKSTGHAG-TRIGWALVKDMEVAKKMTKY-------IELNTIGVSKDSQLRAAKVLKVVSDS 338 (456)
Q Consensus 272 ~~-----~~~~~i~i~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~~-------~~~~~~~~s~~~q~~a~~~L~~~~~~ 338 (456)
.. .-..+| .+|+|.++ .| +++|.++++ +++.+.+... ....+++.++++..++.+.|+.+.+.
T Consensus 267 ~~a~~~~gv~PDi--vt~gK~l~-gG~~P~gav~~~-~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~ 342 (442)
T PRK13360 267 PFAAQYFGVTPDL--LTCAKGLT-NGAIPMGAVFVS-SEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYERE 342 (442)
T ss_pred chhhhhcCCCCce--eeeeeccc-cCccceEEEEEc-HHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 11 112233 48999998 67 799999996 8888877531 23358888999999999999876543
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhc---CCccccCCCCcccccccccCCCCCceEEeecC----c---cHHH
Q 012785 339 CKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKS---GLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE----Q---EIED 408 (456)
Q Consensus 339 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~----~---~~~~ 408 (456)
...++.+++.+++.+.|+++ +.+.-.+..|.+ .-+.+. . ....
T Consensus 343 -------------~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~--------------~~~~l~~~~~~~~~~~~~ 395 (442)
T PRK13360 343 -------------GLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLV--------------GAVELAPRDGKPGKRAYE 395 (442)
T ss_pred -------------CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceE--------------EEEEEecCCCCcchhHHH
Confidence 23444555555566666543 222122223332 222221 1 1345
Q ss_pred HHHHHHhCCEEeecCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhh
Q 012785 409 CESFLKGNKILTRSGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 409 ~~~~l~~~gI~v~pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l 455 (456)
+...+.++||++.++ .+.+||+ +..+++++++++++|.+.+
T Consensus 396 ~~~~l~~~Gvl~~~~------~~~lr~~Ppl~~t~~eid~~~~~l~~~l 438 (442)
T PRK13360 396 VFLKCFEKGLMIRYT------GDILALSPPLIIEEAQIDELFDILAQAL 438 (442)
T ss_pred HHHHHHHCCcEEEec------CCEEEEeCCCccCHHHHHHHHHHHHHHH
Confidence 667788999999862 3579999 4459999999999998876
No 279
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.65 E-value=2.5e-14 Score=144.63 Aligned_cols=256 Identities=11% Similarity=0.066 Sum_probs=164.0
Q ss_pred ceEEEccCHHHHHHHHHHHhcCC----CCCCCcEEEEeCCCCCChhhhhhhc-CC---------------eEeeecc---
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQ----DASEPISVVSAAPYYSSYPSITDCV-KS---------------RLYKWAG--- 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~----gd~~~~~Vlv~~P~y~~~~~~~~~~-g~---------------~~~~~~~--- 220 (456)
+.+++++++++|++.+++..... |.....+|+...-+|++....+... +. ..++.+.
T Consensus 101 ~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 180 (422)
T PRK05630 101 DHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRG 180 (422)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccC
Confidence 58999999999999999876421 1111117999999999866544332 10 1111110
Q ss_pred -Cc-------ccccc---CCCeEEEEcC-CCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC-----CC
Q 012785 221 -DA-------KRFNK---DGPYIELVTS-PNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT-----YP 274 (456)
Q Consensus 221 -d~-------~~l~~---~~~~~i~v~~-P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~-----~~ 274 (456)
+. +.++. .+..++++.. .+.-.|...+ ++|+++|+++|.||++.+.+.++-. ..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~g 260 (422)
T PRK05630 181 SSPQEISEYLRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAG 260 (422)
T ss_pred CChHHHHHHHHHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcC
Confidence 00 11111 2556676654 2666677654 3899999999999999875444321 11
Q ss_pred CCCcEEEecCccccCCCC-ceEEEEEEeCHHHHHHHHHH------HhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcch
Q 012785 275 ADHDLMLFTVSKSTGHAG-TRIGWALVKDMEVAKKMTKY------IELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDE 347 (456)
Q Consensus 275 ~~~~i~i~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~~------~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~ 347 (456)
-..+|+ +|+|.++ .| ..+|+++++ +++.+.+... ....|++.+++...++.+.|+.+.+.
T Consensus 261 v~PDi~--t~gK~l~-gG~~p~~av~~~-~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~--------- 327 (422)
T PRK05630 261 VTPDIM--CVGKALT-GGFMSFAATLCT-DKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETG--------- 327 (422)
T ss_pred CCCCee--eeechhh-cCccccceeecc-HHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhC---------
Confidence 123444 8899987 67 589999997 8888877532 23468899999999999999876543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHh---cCCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeec
Q 012785 348 CFFEFTNHQMSTRWKQLRMAVQK---SGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRS 422 (456)
Q Consensus 348 ~~l~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~p 422 (456)
+. +++++++-+.+.+.|+. .+.+.-.+..|. ++-+.+.. ....+...+.++||++.+
T Consensus 328 ~~----~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl--------------~~~ie~~~~~~~~~~~~~~~~~Gl~~~~ 389 (422)
T PRK05630 328 MW----RKQVKRIEAELIAGLSPLAHLPGVADVRVLGA--------------IGVVEMEQPVDMEEATQAAVDHGVWLRP 389 (422)
T ss_pred cH----HHHHHHHHHHHHHHHHHhhcCCCeeeeecccc--------------EEEEEECCcccHHHHHHHHHHCCeEEEe
Confidence 12 22344444444444443 222222333343 45555532 345778888999999987
Q ss_pred CCCCCCCCCeEEEEec--CChhHHHHHHHHHHhhhC
Q 012785 423 GKHFGFSPKYVRISML--DRDENYNLFVQRLSKILS 456 (456)
Q Consensus 423 g~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l~ 456 (456)
. .+.+|+.-. .+++++++++++|.+.++
T Consensus 390 ~------g~~l~~~PpL~it~~~i~~~~~~l~~al~ 419 (422)
T PRK05630 390 F------GRLVYVMPPYITTSEQIAQICAALAAAVK 419 (422)
T ss_pred c------CCEEEEECCccCCHHHHHHHHHHHHHHHh
Confidence 2 267888743 599999999999998863
No 280
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.64 E-value=1.4e-15 Score=147.17 Aligned_cols=144 Identities=13% Similarity=0.080 Sum_probs=111.7
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc-
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG- 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~- 220 (456)
..++++.+|++++. ++-+++|+|+++++..++.+++.+|| +|+++.|+|......+...|++++.++.
T Consensus 61 i~~~~~~~A~~~ga-------~~~~~~~~Gst~a~~~~l~al~~~gd----~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~ 129 (294)
T cd00615 61 IKEAQELAARAFGA-------KHTFFLVNGTSSSNKAVILAVCGPGD----KILIDRNCHKSVINGLVLSGAVPVYLKPE 129 (294)
T ss_pred HHHHHHHHHHHhCC-------CCEEEEcCcHHHHHHHHHHHcCCCCC----EEEEeCCchHHHHHHHHHCCCEEEEecCc
Confidence 57889999999863 34555699999999999999999999 9999999999999888999988775533
Q ss_pred -----------Ccccccc-----CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCC-CCCC---C-CCC
Q 012785 221 -----------DAKRFNK-----DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWP-QYTS---I-TYP 274 (456)
Q Consensus 221 -----------d~~~l~~-----~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~-~~~~---~-~~~ 274 (456)
|.+.++. .+++++++++| ||+|.+++ ++|+++|+++|+||+|... .+.+ . ...
T Consensus 130 ~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~ 208 (294)
T cd00615 130 RNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAM 208 (294)
T ss_pred cCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhh
Confidence 3333332 25789999999 79999887 4889999999999999741 1211 1 123
Q ss_pred CCCcEEEecCccccCCCCceEEEEE
Q 012785 275 ADHDLMLFTVSKSTGHAGTRIGWAL 299 (456)
Q Consensus 275 ~~~~i~i~S~SK~~g~~G~RiG~l~ 299 (456)
.+.++++.|++|++ +|+|.|+++
T Consensus 209 ~~~div~~S~hK~l--~g~~~~~~l 231 (294)
T cd00615 209 AGADIVVQSTHKTL--PALTQGSMI 231 (294)
T ss_pred cCCcEEEEchhccc--chHhHHHHH
Confidence 46799999999974 788875543
No 281
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.64 E-value=2.1e-14 Score=145.91 Aligned_cols=258 Identities=12% Similarity=0.122 Sum_probs=162.4
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhc-CC-------------------eEeeecc-C
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCV-KS-------------------RLYKWAG-D 221 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~-g~-------------------~~~~~~~-d 221 (456)
+.+++++++++|++.+++.... .|.. +|+...-+|++....+... |. .+..++. |
T Consensus 110 ~~v~f~~sGseA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 186 (428)
T PRK12389 110 EKVRFVNSGTEAVMTTIRVARAYTGRT---KIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFND 186 (428)
T ss_pred cEEEEeCCHHHHHHHHHHHHHHhhCCC---EEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCC
Confidence 5899999999999999987643 2322 8999999999976544332 11 0111111 3
Q ss_pred cccccc------CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC---C--CCCCcEEE
Q 012785 222 AKRFNK------DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT---Y--PADHDLML 281 (456)
Q Consensus 222 ~~~l~~------~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~---~--~~~~~i~i 281 (456)
.+.++. .+..++++...++-.|.+.+ ++|+++|+++|.||++.+. .+... . .-..+|
T Consensus 187 ~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv~PDi-- 263 (428)
T PRK12389 187 IEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGVEPDL-- 263 (428)
T ss_pred HHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCCCCCe--
Confidence 333321 24556666555666676654 3899999999999999865 33221 0 112233
Q ss_pred ecCccccCCCCceEEEEEEeCHHHHHHHHH---HHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHH
Q 012785 282 FTVSKSTGHAGTRIGWALVKDMEVAKKMTK---YIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMS 358 (456)
Q Consensus 282 ~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~---~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~ 358 (456)
.+|+|.+| .|+.+|.++++ +++++.+.. .....|++.++++..++.+.|+.+.+. +.+++..+.-+
T Consensus 264 vt~gK~lg-gG~Pi~av~~~-~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~---------~l~~~~~~~g~ 332 (428)
T PRK12389 264 TALGKIIG-GGLPIGAYGGR-KDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQE---------GVYEKLDRLGA 332 (428)
T ss_pred eeechhhc-CCCceeEEeEH-HHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcc---------cHHHHHHHHHH
Confidence 58999998 89999999986 899888753 224468899999999999999976543 23333333333
Q ss_pred HHHHHHHHHHHhcCC-ccccCCCCcccccccccCCCCCceEEeec-C----------c--cHHHHHHHHHhCCEEeecCC
Q 012785 359 TRWKQLRMAVQKSGL-FSVPELPSQFCTFLGRAFEPQPAFAWLKC-E----------Q--EIEDCESFLKGNKILTRSGK 424 (456)
Q Consensus 359 ~~~~~l~~~L~~~~~-~~~~~~~g~~~~~~~~~~~~~~~f~~~~~-~----------~--~~~~~~~~l~~~gI~v~pg~ 424 (456)
..++.|.+..++++. ..+.+..| +.. +.+.. + + ....+.+.+.++||.+.+..
T Consensus 333 ~l~~~L~~l~~~~~~~~~v~r~~g-~~g------------i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~ 399 (428)
T PRK12389 333 MLEEGILEAAEKHGITITINRLKG-ALT------------VYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSK 399 (428)
T ss_pred HHHHHHHHHHHhCCCCEEEEecCc-EEE------------EEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCC
Confidence 333333333333442 12223333 311 11111 1 0 13456778889999998842
Q ss_pred CCCCCCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 425 HFGFSPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 425 ~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
.+.+.+++..+++++++++++|.++++
T Consensus 400 -----~~~~~~~l~~t~e~id~~~~~l~~~l~ 426 (428)
T PRK12389 400 -----YEAWFLTTAHTEEDIEETLEAVDRAFA 426 (428)
T ss_pred -----CCCeeecCCCCHHHHHHHHHHHHHHHH
Confidence 233567776799999999999998763
No 282
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.64 E-value=5.2e-14 Score=142.44 Aligned_cols=204 Identities=12% Similarity=0.121 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChh----hhhhhcCCeEeee
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYP----SITDCVKSRLYKW 218 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~----~~~~~~g~~~~~~ 218 (456)
.+|++.++++.+. ...|++++|. .++.+++.++.++|| +|+++...|.... ..++..|+++..+
T Consensus 72 ~~le~~la~l~g~-------~~~v~fsSG~-~Ai~~al~~ll~~Gd----~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~v 139 (437)
T PRK05613 72 EALENRIASLEGG-------VHAVAFASGQ-AAETAAILNLAGAGD----HIVTSPRLYGGTETLFLVTLNRLGIEVTFV 139 (437)
T ss_pred HHHHHHHHHHhCC-------CeEEEeCCHH-HHHHHHHHHhcCCCC----EEEECCCccHHHHHHHHHHHHhcCeEEEEE
Confidence 6778888888753 3456666666 888888888889999 9999999999874 3446678888776
Q ss_pred c--cCcccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC-CCCCCCCCCCcEEEecCccc
Q 012785 219 A--GDAKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ-YTSITYPADHDLMLFTVSKS 287 (456)
Q Consensus 219 ~--~d~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~-~~~~~~~~~~~i~i~S~SK~ 287 (456)
+ .|.+.++. .++++|++..|.||+|.+.+ ++|+++|+++|+|.++..+. ..++ ..+-+++++|++|.
T Consensus 140 d~~~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~~p~--~~GaDivv~S~~K~ 217 (437)
T PRK05613 140 ENPDDPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALVRPL--ELGADVVVASLTKF 217 (437)
T ss_pred CCCCCHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccccChH--HhCCCEEEeeccce
Confidence 5 24555543 36788988899999998766 47899999999999986432 2222 23458999999999
Q ss_pred cCCCCceEEEEEEeCHH-----------------------------------HH-HHHHHHHhhccCcCChHHHHHHHHH
Q 012785 288 TGHAGTRIGWALVKDME-----------------------------------VA-KKMTKYIELNTIGVSKDSQLRAAKV 331 (456)
Q Consensus 288 ~g~~G~RiG~l~~~~~~-----------------------------------~~-~~l~~~~~~~~~~~s~~~q~~a~~~ 331 (456)
++..|.-+|-+++.+.+ +. +.............+++..+.+..-
T Consensus 218 l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rg 297 (437)
T PRK05613 218 YTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQG 297 (437)
T ss_pred ecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcc
Confidence 98667666665552111 00 1111223334566777776666655
Q ss_pred HHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 012785 332 LKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFS 375 (456)
Q Consensus 332 L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 375 (456)
|+ .+.-..++..++...+.+.|++++.+.
T Consensus 298 l~---------------TL~lR~~~~~~nA~~lA~~L~~hp~V~ 326 (437)
T PRK05613 298 LD---------------TLSLRLERHNENAIKVAEFLNNHEKVA 326 (437)
T ss_pred cC---------------cHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 54 344455667788888999999987654
No 283
>PRK07480 putative aminotransferase; Validated
Probab=99.63 E-value=2.4e-14 Score=146.08 Aligned_cols=258 Identities=14% Similarity=0.090 Sum_probs=161.3
Q ss_pred ceEEEccCHHHHHHHHHHHhcCC----CCCCCcEEEEeCCCCCChhhhhhhcCC---------------eEeeecc----
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQ----DASEPISVVSAAPYYSSYPSITDCVKS---------------RLYKWAG---- 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~----gd~~~~~Vlv~~P~y~~~~~~~~~~g~---------------~~~~~~~---- 220 (456)
+++++++++++|++.+++..... |.....+|+...-+|++....+...+. ..++++.
T Consensus 112 ~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~ 191 (456)
T PRK07480 112 NHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGE 191 (456)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCccccc
Confidence 58999999999999999876431 211111788889999987643322211 1111110
Q ss_pred ----C--------ccccc----c---CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC
Q 012785 221 ----D--------AKRFN----K---DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT 272 (456)
Q Consensus 221 ----d--------~~~l~----~---~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~ 272 (456)
+ .+.++ . .+..+|++...+.-.|...+ ++|+++|+++|.||++.+.+.++..
T Consensus 192 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~ 271 (456)
T PRK07480 192 GGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEW 271 (456)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcch
Confidence 0 02221 1 24567777555655666654 3899999999999999875444421
Q ss_pred C-----CCCCcEEEecCccccCCCCc-eEEEEEEeCHHHHHHHHH----HHhhccCcCChHHHHHHHHHHHhhhCCCCCC
Q 012785 273 Y-----PADHDLMLFTVSKSTGHAGT-RIGWALVKDMEVAKKMTK----YIELNTIGVSKDSQLRAAKVLKVVSDSCKPS 342 (456)
Q Consensus 273 ~-----~~~~~i~i~S~SK~~g~~G~-RiG~l~~~~~~~~~~l~~----~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~ 342 (456)
. .-..+ +.+|+|.++ .|. ++|.++++ +++.+.+.. .....|++.++++..++.+.|+.+.+.
T Consensus 272 ~a~~~~gv~PD--iv~~gK~l~-gG~~Pi~av~~~-~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~---- 343 (456)
T PRK07480 272 FGSQHFGIKPD--LMTIAKGLT-SGYIPMGAVGVG-DRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDE---- 343 (456)
T ss_pred hhhhhcCCCCC--eeeeehhhc-cCCccceEEEEc-HHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhC----
Confidence 1 11223 456899998 784 99999996 888887732 234468999999999999999977553
Q ss_pred CCcchhHHHHHH-HHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeec-Cc--------c----HHH
Q 012785 343 GSEDECFFEFTN-HQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKC-EQ--------E----IED 408 (456)
Q Consensus 343 ~~~~~~~l~~~~-~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~-~~--------~----~~~ 408 (456)
+.+++.+ +.-+..++.+.+ +.+++.+.-.+..|.+ +-+.+ ++ + ...
T Consensus 344 -----~l~~~~~~~~g~~l~~~l~~-l~~~~~i~~vrG~Glm--------------~gie~~~~~~~~~~~~~~~~~~~~ 403 (456)
T PRK07480 344 -----GIVERVRDDTGPYLQKRLRE-LADHPLVGEVRGVGLV--------------GAIELVKDKATRERFEAGGGVGTI 403 (456)
T ss_pred -----CHHHHHHHHHHHHHHHHHHH-hhcCCCeeeEEeecce--------------EEEEEeccccccccCcchhhHHHH
Confidence 2333331 222222233333 3344433333444544 33333 11 0 135
Q ss_pred HHHHHHhCCEEeecCCCCCCCCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 409 CESFLKGNKILTRSGKHFGFSPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 409 ~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
+...+.++||.+.+. .+.+|++-.. +++++++++++|.+.+
T Consensus 404 ~~~~~~~~Gll~~~~------~~~l~~~Ppl~it~~eid~~~~~l~~al 446 (456)
T PRK07480 404 CRDHCFANGLIMRAV------GDRMIISPPLVITHAEIDELVEKARKAL 446 (456)
T ss_pred HHHHHHHCCcEEeec------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 666788999999762 3578888554 9999999999998876
No 284
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.62 E-value=1.9e-13 Score=135.07 Aligned_cols=261 Identities=12% Similarity=0.036 Sum_probs=178.0
Q ss_pred CceEEEccC-HHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCC--hhhhhhhcCCeEeeec----------cCcccccc-C
Q 012785 163 NHHIVVGTG-STQLFQAALYALSSQDASEPISVVSAAPYYSS--YPSITDCVKSRLYKWA----------GDAKRFNK-D 228 (456)
Q Consensus 163 ~~~I~~t~G-~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~--~~~~~~~~g~~~~~~~----------~d~~~l~~-~ 228 (456)
..+|++++| +|.++++++..+..+|+ ++++..-+..+ +...++..|. +..+. .|.+.++. .
T Consensus 55 ~~~v~~~~gsgT~a~ea~~~nl~~~~~----~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (349)
T TIGR01364 55 NYEVLFLQGGATGQFAAVPLNLLAEGK----VADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEISE 129 (349)
T ss_pred CceEEEEcCCchHHHHHHHHhcCCCCC----eEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCCCC
Confidence 357887777 99999999999998888 77776555443 4567777787 44322 12222222 2
Q ss_pred CCeEEEEcCCCCCCcccchHHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHH
Q 012785 229 GPYIELVTSPNNPDGSVRQSVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKK 308 (456)
Q Consensus 229 ~~~~i~v~~P~NPtG~~~~~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~ 308 (456)
++++|.++...+.||+..+++++.+++++|+|-+..-.+..--.+..+ ++++|--|.+|.|| +|.++++ +++.++
T Consensus 130 ~~~~v~~th~ETstGv~~~~l~~~~~~l~iVDavss~g~~~id~~~~d--~~~~ssqK~lgP~G--lg~l~~s-~~~~~~ 204 (349)
T TIGR01364 130 DAAYVHYCANETIHGVEFRELPDVKNAPLVADMSSNILSRPIDVSKFG--LIYAGAQKNIGPAG--LTVVIVR-KDLLGR 204 (349)
T ss_pred CCCEEEEcCCCCcccEecceecccCCCeEEEEccccccCccCCHHHcc--EEEEecccccCCCc--eEEEEEC-HHHHhh
Confidence 578888888889999998999999999999999887432221112223 99999999999888 7999996 777765
Q ss_pred HHHH-------H-----hhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchh-HHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 012785 309 MTKY-------I-----ELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDEC-FFEFTNHQMSTRWKQLRMAVQKSGLFS 375 (456)
Q Consensus 309 l~~~-------~-----~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~l~~~L~~~~~~~ 375 (456)
+... . ......++.....+..++|+.+.+ . -++.+.++.++..+++++.|++++++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~----------~gG~e~i~~r~~~l~~~l~~~l~~~~gl~ 274 (349)
T TIGR01364 205 ASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKE----------QGGVKAIEKRNQAKAQLLYDTIDNSNGFY 274 (349)
T ss_pred cccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 5221 1 111234556666666777775432 2 277888899999999999999986432
Q ss_pred ccCCCCcccccccccCCCCCceEEeecCcc--HHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC--ChhHHHHHHHHH
Q 012785 376 VPELPSQFCTFLGRAFEPQPAFAWLKCEQE--IEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD--RDENYNLFVQRL 451 (456)
Q Consensus 376 ~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L 451 (456)
........ ..+.-+-+.++.. ...+...+.++|+.+.+|.. ..+.+|+|+.. +.|+++.+++.|
T Consensus 275 ~~~~~~~~---------rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~---~~g~vRvS~~~~nt~edid~l~~al 342 (349)
T TIGR01364 275 RNPVDPRN---------RSRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHR---SVGGMRASIYNAMPLEGVQALVDFM 342 (349)
T ss_pred ccCCCHHH---------cCCeEEEEecCChhHhHHHHHHHHHCCCcccCCcc---ccCeeEEECcCCCCHHHHHHHHHHH
Confidence 22111000 0111233344422 25565678889998888765 24689999865 799999999999
Q ss_pred Hhhh
Q 012785 452 SKIL 455 (456)
Q Consensus 452 ~~~l 455 (456)
++++
T Consensus 343 ~~~~ 346 (349)
T TIGR01364 343 KEFQ 346 (349)
T ss_pred HHHH
Confidence 9876
No 285
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.62 E-value=4.6e-14 Score=144.17 Aligned_cols=257 Identities=14% Similarity=0.109 Sum_probs=162.5
Q ss_pred eEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhcC---------------CeEeeecc--------
Q 012785 165 HIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCVK---------------SRLYKWAG-------- 220 (456)
Q Consensus 165 ~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~g---------------~~~~~~~~-------- 220 (456)
.++++++++||.+.+++.... .|.. +|+...-+|++....+.... ...++++-
T Consensus 123 ~~f~~~SGsEAve~AlklAr~~tgr~---~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (459)
T PRK06931 123 LQFTGPSGADAVEAAIKLAKTYTGRS---NVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGI 199 (459)
T ss_pred EEEeCCCcHHHHHHHHHHHHHhcCCC---eEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccC
Confidence 346668889999999987643 2322 89999999999886665431 11122210
Q ss_pred ----Ccccc--------cc-----CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCCCC
Q 012785 221 ----DAKRF--------NK-----DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSITYP 274 (456)
Q Consensus 221 ----d~~~l--------~~-----~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~~~ 274 (456)
+.+.+ +. .+..++++...+.-.|.+.+ ++|+++|+++|.||++.+.+.++....
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a 279 (459)
T PRK06931 200 GGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFA 279 (459)
T ss_pred CchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHH
Confidence 01111 10 13566766544555566554 389999999999999997655442211
Q ss_pred -----CCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhH
Q 012785 275 -----ADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECF 349 (456)
Q Consensus 275 -----~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~ 349 (456)
-..+ +.+++|.++ .|+++|.++.. +++ +.+.......|++.++++..++.+.|+.+.+. +.
T Consensus 280 ~~~~gv~PD--ivt~gK~l~-gG~Pi~av~~~-~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~~---------~l 345 (459)
T PRK06931 280 FEHAGIEPD--IIVMSKAVG-GGLPLAVLGIK-KEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILKEE---------NL 345 (459)
T ss_pred hhhcCCCCC--EEEeccccc-CCcceeeeeeH-HHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHhC---------CH
Confidence 1223 345799999 89999988875 553 55544445578999999999999999877553 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC-c---------------cHHHHHHHH
Q 012785 350 FEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE-Q---------------EIEDCESFL 413 (456)
Q Consensus 350 l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~-~---------------~~~~~~~~l 413 (456)
+++.++.-+..++.|.+..++++.+.-.+..|.+ +.+.+. + ....+...+
T Consensus 346 ~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm--------------~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (459)
T PRK06931 346 AQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLM--------------IGIEIVDERQPADAMGSYPADGELAAAIQKAC 411 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceE--------------EEEEEccCcccccccccCCccHHHHHHHHHHH
Confidence 4444444444444444444445544444555554 333331 0 123466677
Q ss_pred HhCCEEeecCCCCCCCCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 414 KGNKILTRSGKHFGFSPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 414 ~~~gI~v~pg~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
.++||++.++.. ..+.+|+..+ .+++++++++++|.+.+
T Consensus 412 ~~~Gvl~~~~~~---~~~~l~~~Ppl~it~~eid~~~~~l~~~l 452 (459)
T PRK06931 412 FENGLLLERGGR---NGNVVRLLPPLLITQAECEEFIDRFEQAL 452 (459)
T ss_pred HHCCcEEeecCC---CCCEEEEECCCCcCHHHHHHHHHHHHHHH
Confidence 899999987432 2467887644 49999999999998876
No 286
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.62 E-value=3.1e-14 Score=144.00 Aligned_cols=253 Identities=11% Similarity=0.077 Sum_probs=162.7
Q ss_pred ceEEEccCHHHHHHHHHHHhcC------CCCCCCcEEEEeCCCCCChhhhhhhc-CC---------------eEeeec--
Q 012785 164 HHIVVGTGSTQLFQAALYALSS------QDASEPISVVSAAPYYSSYPSITDCV-KS---------------RLYKWA-- 219 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~------~gd~~~~~Vlv~~P~y~~~~~~~~~~-g~---------------~~~~~~-- 219 (456)
+.++++++++||++.+++.... .+.. +|+...-+|++....+... +. ..++.+
T Consensus 104 ~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~---kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~ 180 (428)
T PRK07986 104 ECVFLADSGSVAVEVAMKMALQYWQAKGEPRQ---RFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQS 180 (428)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCc---EEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCc
Confidence 5899999999999999987643 2222 8999999999866443332 11 011111
Q ss_pred --------cCcccccc------CCCeEEEEcC-CCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC---
Q 012785 220 --------GDAKRFNK------DGPYIELVTS-PNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT--- 272 (456)
Q Consensus 220 --------~d~~~l~~------~~~~~i~v~~-P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~--- 272 (456)
.|.+.++. .+..+|++.. .+.-.|...+ ++|+++|+++|.||++.+.+.++-.
T Consensus 181 ~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~ 260 (428)
T PRK07986 181 RFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFAC 260 (428)
T ss_pred ccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeee
Confidence 01122211 2345666644 2544455432 3899999999999999865443321
Q ss_pred C--CCCCcEEEecCccccCCCC-ceEEEEEEeCHHHHHHHHHH-----HhhccCcCChHHHHHHHHHHHhhhCCCCCCCC
Q 012785 273 Y--PADHDLMLFTVSKSTGHAG-TRIGWALVKDMEVAKKMTKY-----IELNTIGVSKDSQLRAAKVLKVVSDSCKPSGS 344 (456)
Q Consensus 273 ~--~~~~~i~i~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~~-----~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~ 344 (456)
. .-..+|+ +|+|.++ .| +.+|.++++ +++.+.+... ....+++.++++..++.+.|+.+.+.
T Consensus 261 ~~~gv~PDi~--t~gK~l~-gG~~p~~av~~~-~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~------ 330 (428)
T PRK07986 261 EHAGIAPDIL--CLGKALT-GGTMTLSATLTT-REVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESG------ 330 (428)
T ss_pred cccCCCCCEE--Eechhhh-CCcccCcchhch-HHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC------
Confidence 1 1123444 5999998 88 599999996 8898888652 23467889999999999999876543
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhc---CCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEE
Q 012785 345 EDECFFEFTNHQMSTRWKQLRMAVQKS---GLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKIL 419 (456)
Q Consensus 345 ~~~~~l~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~ 419 (456)
+ .+++.+++-+++.+.|+++ +.+.-.+..|. ++-+.+.. ....+.+.+.++||.
T Consensus 331 ---~----~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl--------------~~~ve~~~~~~~~~~~~~l~~~Gl~ 389 (428)
T PRK07986 331 ---D----WQQQVAAIEAQLREELAPLRDAPMVADVRVLGA--------------IGVVETTRPVNMAALQRFFVEQGVW 389 (428)
T ss_pred ---C----HHHHHHHHHHHHHHHHHHHhcCCCEEeEeccce--------------EEEEEeCCcccHHHHHHHHHHCCcE
Confidence 2 2344444445555555443 32222233333 34444432 345678888999999
Q ss_pred eecCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhhC
Q 012785 420 TRSGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 420 v~pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l~ 456 (456)
+.+. .+.+|+. +..+++++++++++|.+.++
T Consensus 390 ~~~~------g~~i~~~Ppl~it~~ei~~~~~~l~~~l~ 422 (428)
T PRK07986 390 IRPF------GKLIYLMPPYIILPEQLQRLTAAVNRAVQ 422 (428)
T ss_pred EEec------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 9873 2578995 55699999999999998763
No 287
>PRK12403 putative aminotransferase; Provisional
Probab=99.62 E-value=1.2e-13 Score=141.40 Aligned_cols=259 Identities=10% Similarity=0.024 Sum_probs=160.8
Q ss_pred ceEEEccCHHHHHHHHHHHhcCC----CCCCCcEEEEeCCCCCChhhhhhhc-CC-------------eEeeecc-----
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQ----DASEPISVVSAAPYYSSYPSITDCV-KS-------------RLYKWAG----- 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~----gd~~~~~Vlv~~P~y~~~~~~~~~~-g~-------------~~~~~~~----- 220 (456)
+.+++++++++|++.+++....- |......|+...-+|++........ |. ..++++.
T Consensus 116 ~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~ 195 (460)
T PRK12403 116 SHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANG 195 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccc
Confidence 58999999999999999987521 2111115666677899875543322 11 1111110
Q ss_pred -C----------cccc----cc---CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCCC
Q 012785 221 -D----------AKRF----NK---DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSITY 273 (456)
Q Consensus 221 -d----------~~~l----~~---~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~~ 273 (456)
+ .+.+ .. .+..+|++..-+.-.|.+.+ ++|+++|+++|.||++.+.+.++...
T Consensus 196 ~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~ 275 (460)
T PRK12403 196 GELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWF 275 (460)
T ss_pred cCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh
Confidence 0 1112 11 23456666544555566544 38999999999999998654444211
Q ss_pred -----CCCCcEEEecCccccCCCCc-eEEEEEEeCHHHHHHHHHH----HhhccCcCChHHHHHHHHHHHhhhCCCCCCC
Q 012785 274 -----PADHDLMLFTVSKSTGHAGT-RIGWALVKDMEVAKKMTKY----IELNTIGVSKDSQLRAAKVLKVVSDSCKPSG 343 (456)
Q Consensus 274 -----~~~~~i~i~S~SK~~g~~G~-RiG~l~~~~~~~~~~l~~~----~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~ 343 (456)
.-..+|+ +|+|.+| .|. .+|.++++ +++.+.+... ....|++.++++..++.+.|+.+.+.
T Consensus 276 a~e~~gv~PDiv--~~gK~lg-gG~~Piga~v~~-~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~----- 346 (460)
T PRK12403 276 AHEHFGFEPDTL--SIAKGLT-SGYVPMGGLVLS-KRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDE----- 346 (460)
T ss_pred hhhhcCCCCCeE--EEccccc-ccccceEEEEEC-HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc-----
Confidence 1123455 4999998 785 99999996 8888877531 23468889999999999999876543
Q ss_pred CcchhHHHHHH-HHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--------c-----HHHH
Q 012785 344 SEDECFFEFTN-HQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--------E-----IEDC 409 (456)
Q Consensus 344 ~~~~~~l~~~~-~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--------~-----~~~~ 409 (456)
..+++.+ +.-+..++.|.+..++++.+.-.+..|.+ +.+.+.. . ...+
T Consensus 347 ----~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~--------------~gie~~~~~~~~~~~~~~~~~~~~~ 408 (460)
T PRK12403 347 ----GVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLV--------------AALQFAEDKATRKRFANENDLAWRC 408 (460)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceE--------------EEEEEccCccccccccchhHHHHHH
Confidence 2344443 33333344444444455544445555654 3333311 0 1224
Q ss_pred HHHHHhCCEEeecCCCCCCCCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 410 ESFLKGNKILTRSGKHFGFSPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 410 ~~~l~~~gI~v~pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
...+.++||.+.+. .+.+|++-.. +++++++++++|.++|
T Consensus 409 ~~~~~~~Gll~~~~------~~~~~l~Ppl~it~~eid~~~~~l~~al 450 (460)
T PRK12403 409 RTIGFEEGVIIRST------LGRMIMAPALVAGRAEIDELVDKTRIAV 450 (460)
T ss_pred HHHHHhCCEEEEec------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 45667899999862 2457887543 9999999999998876
No 288
>PRK07046 aminotransferase; Validated
Probab=99.62 E-value=9.5e-14 Score=141.53 Aligned_cols=258 Identities=13% Similarity=0.039 Sum_probs=160.6
Q ss_pred CceEEEccCHHHHHHHHHHHhcCC-CCCCCcEEEEeCCCCCChhhhhhh--c-----------CC--------eEeeecc
Q 012785 163 NHHIVVGTGSTQLFQAALYALSSQ-DASEPISVVSAAPYYSSYPSITDC--V-----------KS--------RLYKWAG 220 (456)
Q Consensus 163 ~~~I~~t~G~~~al~~~~~~l~~~-gd~~~~~Vlv~~P~y~~~~~~~~~--~-----------g~--------~~~~~~~ 220 (456)
.+.+.++++++||...+++..... |.. +|+...-+|++....+.. . |. ..++|+
T Consensus 130 ~~~v~F~nSGtEA~e~AlrlAR~~TGr~---~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n- 205 (453)
T PRK07046 130 LPYWQVATTATDANRFVLRWARAVTGRP---KILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFN- 205 (453)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHhhCCC---EEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCC-
Confidence 368999999999999999876432 322 899989999997422211 0 10 011121
Q ss_pred Ccccccc----CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCC---CCCCCCCCCCCCCcEEEecC
Q 012785 221 DAKRFNK----DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYY---WPQYTSITYPADHDLMLFTV 284 (456)
Q Consensus 221 d~~~l~~----~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~---~~~~~~~~~~~~~~i~i~S~ 284 (456)
|.+.++. .+..+|++..-+.-.|.+.+ ++|+++|+++|.||++. +.+...-...-..+|+ +|
T Consensus 206 d~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~~~gv~PDi~--t~ 283 (453)
T PRK07046 206 DLAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTRAHGLEPDFL--VV 283 (453)
T ss_pred CHHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchhHHhCCCccce--ee
Confidence 4444432 34566666544544565544 38999999999999986 2221110011123444 58
Q ss_pred ccccCCCCceEEEEEEeCHHHHHHHHHH---------HhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHH
Q 012785 285 SKSTGHAGTRIGWALVKDMEVAKKMTKY---------IELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNH 355 (456)
Q Consensus 285 SK~~g~~G~RiG~l~~~~~~~~~~l~~~---------~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~ 355 (456)
+|.+| .|+.+|.++++ +++++.+... ....|++.++++..++.+.|+.+.+. +.+++..+
T Consensus 284 gK~lg-gG~Pi~av~g~-~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~---------~~~~~~~~ 352 (453)
T PRK07046 284 GKPIA-GGVPCAVYGFS-AELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTE---------AAYAHMLA 352 (453)
T ss_pred hhhhc-CCCcceeeeeh-HHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcc---------cHHHHHHH
Confidence 99999 89999999997 8898887642 12348889999999999999876543 34444444
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC-c----------c---HHHHHHHHHhCCEEee
Q 012785 356 QMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE-Q----------E---IEDCESFLKGNKILTR 421 (456)
Q Consensus 356 ~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~-~----------~---~~~~~~~l~~~gI~v~ 421 (456)
.-+..++.|.+.+++.+........|.+.. +.+.-+ . + ...+...+.++||.+.
T Consensus 353 ~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~------------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~ 420 (453)
T PRK07046 353 LAARLAAGLRAVIARHGLPWHVTRVGARVE------------FQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLIT 420 (453)
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEeCcEEE------------EEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEe
Confidence 444444555555555442222223333311 111100 0 1 2345566778999998
Q ss_pred cCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 422 SGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 422 pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
|. .+.++++...++++++++++++.+.+
T Consensus 421 ~~------~~~~~~~p~~t~~did~~~~~~~~~l 448 (453)
T PRK07046 421 PF------HNMMLVCPATTAADVDRLVAAFDACL 448 (453)
T ss_pred cc------cCcEEEeCCCCHHHHHHHHHHHHHHH
Confidence 72 24578887679999999999998876
No 289
>PRK07036 hypothetical protein; Provisional
Probab=99.62 E-value=4.1e-14 Score=144.86 Aligned_cols=255 Identities=11% Similarity=0.098 Sum_probs=161.7
Q ss_pred ceEEEccCHHHHHHHHHHHhcCC----CCCCCcEEEEeCCCCCChhhhhhhcCC---------------eEeeeccC---
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQ----DASEPISVVSAAPYYSSYPSITDCVKS---------------RLYKWAGD--- 221 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~----gd~~~~~Vlv~~P~y~~~~~~~~~~g~---------------~~~~~~~d--- 221 (456)
+.+++++++++|++.+++..... |.+...+|+...-+|++....+..... ..++.+..
T Consensus 113 ~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 192 (466)
T PRK07036 113 NHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRR 192 (466)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCccccc
Confidence 58999999999999999875321 210011899999999997755433211 11111100
Q ss_pred -------------cc----ccc---cCCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC
Q 012785 222 -------------AK----RFN---KDGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT 272 (456)
Q Consensus 222 -------------~~----~l~---~~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~ 272 (456)
.+ .+. ..+..+|++...+.-.|...+ ++|++||+++|.||++.+.+.++-.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~ 272 (466)
T PRK07036 193 PAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHF 272 (466)
T ss_pred ccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchh
Confidence 00 111 124567777655666677655 3899999999999999875544311
Q ss_pred C------CCCCcEEEecCccccCCCC-ceEEEEEEeCHHHHHHHHH-------HHhhccCcCChHHHHHHHHHHHhhhCC
Q 012785 273 Y------PADHDLMLFTVSKSTGHAG-TRIGWALVKDMEVAKKMTK-------YIELNTIGVSKDSQLRAAKVLKVVSDS 338 (456)
Q Consensus 273 ~------~~~~~i~i~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~-------~~~~~~~~~s~~~q~~a~~~L~~~~~~ 338 (456)
. .-..+ +.+++|.++ .| +.+|.++++ +++.+.+.. ..+..|++.++++..++.+.|+.+.+.
T Consensus 273 ~~~~~~~gv~PD--ivt~gK~l~-gG~~Pi~av~~~-~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~ 348 (466)
T PRK07036 273 FASEAVFGIQPD--IITFAKGLT-SGYQPLGAVIIS-ERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMERE 348 (466)
T ss_pred hhhhhhcCCCCC--EEEEccccc-cCccccEEEEEc-HHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 1 11223 446899998 88 599999996 899888753 233458889999999999999877543
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHH---hcCCccccCCCCcccccccccCCCCCceEEeecCc-----------
Q 012785 339 CKPSGSEDECFFEFTNHQMSTRWKQLRMAVQ---KSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----------- 404 (456)
Q Consensus 339 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~---~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----------- 404 (456)
+. .++.++..+.+.+.|+ +++.+.-.+..|.+ +.+.+..
T Consensus 349 ---------~l----~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~--------------~~ve~~~~~~~~~~~~~~ 401 (466)
T PRK07036 349 ---------GL----CEHVREVGPYFEERLASLRELPLVGDVRGDHLM--------------ACVECVADKGSKALLPED 401 (466)
T ss_pred ---------CH----HHHHHHHHHHHHHHHHHhccCCCEEEEEeeceE--------------EEEEEccCccccCCCCch
Confidence 22 3333344444444443 33433333444443 4444411
Q ss_pred --cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhh
Q 012785 405 --EIEDCESFLKGNKILTRSGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 405 --~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l 455 (456)
....+...+.++||++.+. .+.+|++ +..+++++++++++|.+.+
T Consensus 402 ~~~~~~~~~~~~~~Gvl~~~~------~~~~~l~Ppl~it~~~id~~~~~l~~al 450 (466)
T PRK07036 402 IAIGQRIDRHCQERGLLVRPL------EHLCVLSPPLIITRAQIDEIVAILRAAI 450 (466)
T ss_pred hHHHHHHHHHHHHCCcEEeec------CCEEEEeCCCcCCHHHHHHHHHHHHHHH
Confidence 1235667788999999872 2567888 4459999999999998775
No 290
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.62 E-value=3e-14 Score=145.67 Aligned_cols=253 Identities=12% Similarity=0.032 Sum_probs=162.6
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-------CCCCCCcEEEEeCCCCCChhhhhhhcCCe---------------Eeeecc-
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-------QDASEPISVVSAAPYYSSYPSITDCVKSR---------------LYKWAG- 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-------~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~---------------~~~~~~- 220 (456)
+.+++++++++|.+.+++.... ++.. +|+...-+|++....+...+.. .++++.
T Consensus 108 ~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~---~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~ 184 (466)
T PRK07030 108 SRCFYADNGSSAIEVALKMSFHYWRNRGKPRKK---RFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDC 184 (466)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCc---EEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCc
Confidence 5899999999999999987632 2222 7999999999977554433211 111110
Q ss_pred ---------------Cccccc------cCCCeEEEEcC-CCCCCcccch---------HHhhhcCcEEEeeecCCCCCCC
Q 012785 221 ---------------DAKRFN------KDGPYIELVTS-PNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYT 269 (456)
Q Consensus 221 ---------------d~~~l~------~~~~~~i~v~~-P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~ 269 (456)
+.+.++ ..+..++++.. .+.-.|...+ ++|+++|+++|.||++.+.+.+
T Consensus 185 ~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRt 264 (466)
T PRK07030 185 YLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRT 264 (466)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcc
Confidence 011111 12456666644 2555566544 3899999999999999876554
Q ss_pred CCCC-----CCCCcEEEecCccccCCCC-ceEEEEEEeCHHHHHHHHH-------HHhhccCcCChHHHHHHHHHHHhhh
Q 012785 270 SITY-----PADHDLMLFTVSKSTGHAG-TRIGWALVKDMEVAKKMTK-------YIELNTIGVSKDSQLRAAKVLKVVS 336 (456)
Q Consensus 270 ~~~~-----~~~~~i~i~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~-------~~~~~~~~~s~~~q~~a~~~L~~~~ 336 (456)
+... .-..+|+ +|+|.++ .| +++|.++++ +++.+.+.. .....|++.++++..++.+.|+.+.
T Consensus 265 G~~~a~~~~gv~PDiv--~~gKgl~-gG~~Pi~av~~~-~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~ 340 (466)
T PRK07030 265 GTMFACEQAGIRPDFL--CLSKALT-GGYLPLAAVLTT-DTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFE 340 (466)
T ss_pred ccchHHHhcCCCCCEE--eeehhcc-CCcccceEEEec-HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 4221 1123444 4699998 89 599999996 899887752 2345688999999999999999775
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh---cCCccccCCCCcccccccccCCCCCceEEeecCc---------
Q 012785 337 DSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQK---SGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--------- 404 (456)
Q Consensus 337 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--------- 404 (456)
+. +.+++ .++.-+++.+.|++ .+.+.-.+..|.+ +-+.+..
T Consensus 341 ~~---------~l~~~----~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~--------------~gie~~~~~~~~~~~~ 393 (466)
T PRK07030 341 QD---------NVIEN----NRALARRMAEATAHLADHPHVAEVRQTGMI--------------LAIEMVQDKASKTPYP 393 (466)
T ss_pred hc---------CHHHH----HHHHHHHHHHHHHHHhcCCCEEEeEeceeE--------------EEEEeccCccccccCc
Confidence 53 23333 33344444444433 3333333444443 3343311
Q ss_pred -c---HHHHHHHHHhCCEEeecCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhhC
Q 012785 405 -E---IEDCESFLKGNKILTRSGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 405 -~---~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l~ 456 (456)
+ ...+.+.+.++||++.+. .+.+|+. +..+++++++++++|.+.++
T Consensus 394 ~~~~~~~~i~~~~~~~Gvl~~~~------g~~i~~~Ppl~it~~eid~~~~~l~~al~ 445 (466)
T PRK07030 394 WQERRGLKVYQHALERGALLRPL------GSVVYFLPPYVITPEQIDFLAEVASEGID 445 (466)
T ss_pred chhHHHHHHHHHHHHCCeEEEec------CCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 0 135667788999999872 2568886 44599999999999998763
No 291
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.61 E-value=1.3e-13 Score=140.99 Aligned_cols=256 Identities=14% Similarity=0.053 Sum_probs=158.6
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhcC-Ce--------------Eeeec------c-
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCVK-SR--------------LYKWA------G- 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~g-~~--------------~~~~~------~- 220 (456)
+.++++++++++++.+++.... .|.. +|+...-+|++....+...+ .. .++.+ .
T Consensus 131 ~~v~f~~sGseAve~AlklAr~~tgr~---~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (459)
T PRK06082 131 NRVLFAPGGTSAIGMALKLARHITGNF---KVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFP 207 (459)
T ss_pred CEEEECCCcHHHHHHHHHHHHHhcCCC---EEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccC
Confidence 5899999999999999987643 2211 89999999998764333222 11 11100 0
Q ss_pred Cc--------cccc----c-CCCeEEEEcCCCCCCcccc-h--------HHhhhcCcEEEeeecCCCCCCCCCCC-----
Q 012785 221 DA--------KRFN----K-DGPYIELVTSPNNPDGSVR-Q--------SVVNRSGGILVHDLAYYWPQYTSITY----- 273 (456)
Q Consensus 221 d~--------~~l~----~-~~~~~i~v~~P~NPtG~~~-~--------~l~~~~~~~iI~De~y~~~~~~~~~~----- 273 (456)
+. +.++ . .+..+|++...++- |..+ + ++|+++|+++|.||++.+.+.++...
T Consensus 208 ~~~~~~~~~~~~l~~~i~~~~~vAavIvEPv~g~-g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~ 286 (459)
T PRK06082 208 DADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNT-DVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAY 286 (459)
T ss_pred ChhHHHHHHHHHHHHHHhcCCCEEEEEECCccCC-CCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhh
Confidence 11 1121 1 24456666544554 4433 3 38999999999999998755444221
Q ss_pred CCCCcEEEecCccccCCCC-ceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHH
Q 012785 274 PADHDLMLFTVSKSTGHAG-TRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEF 352 (456)
Q Consensus 274 ~~~~~i~i~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~ 352 (456)
.-..+|+ +|+|.+| .| +.+|.++++ +++.+.+.......+++.++++..++.+.|+.+.+. +.+++
T Consensus 287 gv~PDiv--~~gKgl~-gG~~P~~av~~~-~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~---------~l~~~ 353 (459)
T PRK06082 287 GIEPDIL--CIGKGLG-GGLVPIAAMITK-DKYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQE---------GLLEK 353 (459)
T ss_pred CCCCCEE--Eeccccc-CCCCcceEEEEc-HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc---------CHHHH
Confidence 1123444 4899999 77 599999996 776644321111258899999999999999876543 23333
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc----------cHHHHHHHHHhCCEEeec
Q 012785 353 TNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----------EIEDCESFLKGNKILTRS 422 (456)
Q Consensus 353 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----------~~~~~~~~l~~~gI~v~p 422 (456)
..+.-+..++.|.+..++++.+.-.+..|.+ +.+.+.. ....+...+.++||.+.+
T Consensus 354 ~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~--------------~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~ 419 (459)
T PRK06082 354 VKADSQFMRERLLEMKAKYPLIGDVRGIGLL--------------WGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKV 419 (459)
T ss_pred HHHHHHHHHHHHHHHHhhCCCeeeeeeccce--------------eEEEEccCccccCccHHHHHHHHHHHHhCCCEEEe
Confidence 3333333333344333334433334455554 3344321 123466677899999987
Q ss_pred CCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhh
Q 012785 423 GKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 423 g~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l 455 (456)
. ..+.+|++ +..++++++++++++.+.+
T Consensus 420 ~-----~~~~i~~~Ppl~it~~eid~~~~~l~~~l 449 (459)
T PRK06082 420 S-----QGNVIQLSPPLIITREELTQALAILEEAI 449 (459)
T ss_pred c-----CCCEEEEeCCCccCHHHHHHHHHHHHHHH
Confidence 2 25789998 4459999999999998876
No 292
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.61 E-value=3.7e-13 Score=130.56 Aligned_cols=205 Identities=16% Similarity=0.157 Sum_probs=153.4
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhc----CCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCV----KSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~----g~~~~~ 217 (456)
...|.+.++...+. .+.++++.+..|+..++..|++.|+ +|+.....|.+...+++.. |++...
T Consensus 79 ~~~le~~iaal~ga--------~~~l~fsSGmaA~~~al~~L~~~g~----~iV~~~~~Y~gT~~~l~~~~~~~gie~~~ 146 (409)
T KOG0053|consen 79 RDVLESGIAALEGA--------AHALLFSSGMAAITVALLHLLPAGD----HIVATGDVYGGTLRILRKFLPKFGGEGDF 146 (409)
T ss_pred hHHHHHHHHHHhCC--------ceEEEecccHHHHHHHHHHhcCCCC----cEEEeCCCcccHHHHHHHHHHHhCceeee
Confidence 46788888887753 4688888888999999999999999 9999999999988777664 555555
Q ss_pred eccC-cccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC-CCCCCCCCCCcEEEecCccc
Q 012785 218 WAGD-AKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ-YTSITYPADHDLMLFTVSKS 287 (456)
Q Consensus 218 ~~~d-~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~-~~~~~~~~~~~i~i~S~SK~ 287 (456)
+++| .+.++. .++++|++.+|.||+..+.+ ++|+++|+++|+|+.+..+- ..++ ..+-+|++.|.+|.
T Consensus 147 vd~~~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~~pL--~lGADIV~hSaTKy 224 (409)
T KOG0053|consen 147 VDVDDLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQDPL--PLGADIVVHSATKY 224 (409)
T ss_pred echhhHHHHHHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccccChh--hcCCCEEEEeeeee
Confidence 5432 233332 36899999999999999966 58999999999999998752 2233 34568999999999
Q ss_pred c-CCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 012785 288 T-GHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRM 366 (456)
Q Consensus 288 ~-g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 366 (456)
+ |+..+=.|.++.+.+++..+++..+....++.+++......+-|+. +.-..++..++...+.+
T Consensus 225 i~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglkt---------------l~lRi~~~~ena~~~A~ 289 (409)
T KOG0053|consen 225 IGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLKT---------------LHLRINKHSENALKIAL 289 (409)
T ss_pred ecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcch---------------hhhhHHHHHHHHHHHHH
Confidence 9 4666667777775699999999998888888898877776665552 11223344455555667
Q ss_pred HHHhcCCcc
Q 012785 367 AVQKSGLFS 375 (456)
Q Consensus 367 ~L~~~~~~~ 375 (456)
.|+..+.++
T Consensus 290 ~Le~~~~v~ 298 (409)
T KOG0053|consen 290 LLEAHPKVK 298 (409)
T ss_pred HhhhCCcee
Confidence 777765544
No 293
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.61 E-value=1.1e-13 Score=137.57 Aligned_cols=279 Identities=14% Similarity=0.077 Sum_probs=180.9
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccC-HHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTG-STQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD 221 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G-~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d 221 (456)
.+.|+.++++++. .++++|++|+| +|++++.++..+..+++. .-+++..|........++..|.++..++.+
T Consensus 47 ~~~r~~l~~l~~~-----~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~--~~~i~~g~~~~~~~~~a~~~g~~~~~~~~~ 119 (355)
T cd00611 47 NEAESDLRELLNI-----PDNYKVLFLQGGATGQFAAVPLNLLGDKGT--ADYVVTGAWSAKAAKEAKRYGGVVVIVAAK 119 (355)
T ss_pred HHHHHHHHHHhCC-----CCCceEEEEcCCchHHHHHHHHhcCCCCCe--EEEEECCHHHHHHHHHHHhcCCCcEEEecc
Confidence 4667777777752 13568999988 999999999999873330 023333444344444778888877655543
Q ss_pred cc----c-------cccCCCeEEEEcCCCCCCcccchHHhhhcCcEEEeeecCCCCCCCCCC-CCCCCcEEEecCccccC
Q 012785 222 AK----R-------FNKDGPYIELVTSPNNPDGSVRQSVVNRSGGILVHDLAYYWPQYTSIT-YPADHDLMLFTVSKSTG 289 (456)
Q Consensus 222 ~~----~-------l~~~~~~~i~v~~P~NPtG~~~~~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~i~i~S~SK~~g 289 (456)
.+ . ....++++|.++...|.||..++++++.+|+++++|-+..-.+. ++. ...+ +.+.|-.|.+|
T Consensus 120 ~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~~i~~~~g~~~~VDa~qs~g~~-~idv~~~~--~~~ss~~K~lG 196 (355)
T cd00611 120 EEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFDEVPDTGGVPLVADMSSNILSR-PIDVSKFG--VIYAGAQKNLG 196 (355)
T ss_pred cccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEcceecccCCCeEEEEccccccCC-CCCHHHhC--EEEeecccccC
Confidence 11 1 11236789999999999999988899899999999999884332 221 1122 56666899999
Q ss_pred CCCceEEEEEEeCHHHHHHHHHH-----------Hhhc-cCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHH
Q 012785 290 HAGTRIGWALVKDMEVAKKMTKY-----------IELN-TIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQM 357 (456)
Q Consensus 290 ~~G~RiG~l~~~~~~~~~~l~~~-----------~~~~-~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~ 357 (456)
.+| +|.++++ +++.+++... .... ...++.....++.++|+.+.+. .-++.+.++.
T Consensus 197 P~G--~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~---------gg~e~i~~~~ 264 (355)
T cd00611 197 PAG--VTVVIVR-KDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQ---------GGVEAMEKRN 264 (355)
T ss_pred CCc--eEEEEEC-HHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHc---------CCHHHHHHHH
Confidence 888 7999996 7777665431 0101 2234444566666777654321 0267888899
Q ss_pred HHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCcc--HHHHHHHHHhCCEEeecCCCCCCCCCeEEE
Q 012785 358 STRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQE--IEDCESFLKGNKILTRSGKHFGFSPKYVRI 435 (456)
Q Consensus 358 ~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~~l~~~gI~v~pg~~fg~~~~~iRi 435 (456)
++..+++++.|++++++.....+... ..+.-+-+.+++. .+.....+.++|+.+.+|.. ..+.||+
T Consensus 265 ~~l~~~l~~~l~~~~gl~~~~~~~~~---------rs~~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~~~---~~g~vR~ 332 (355)
T cd00611 265 RQKAQLLYDTIDNSNGFYRGPVDKRA---------RSRMNVPFRLGKEELEKEFLKEAEAAGMIGLKGHR---SVGGIRA 332 (355)
T ss_pred HHHHHHHHHHHHhCccccccCCCHHH---------cCceEEEEEcCChhhhHHHHHHHHHCCCcccCCCc---ccCeEEE
Confidence 99999999999998543211100000 0111233344431 24444577789998666653 2478999
Q ss_pred EecC--ChhHHHHHHHHHHhhh
Q 012785 436 SMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 436 s~~~--~~e~i~~~l~~L~~~l 455 (456)
|+.. ++||++.+++.|+++.
T Consensus 333 S~~~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 333 SIYNALSLEGVQALADFMKEFQ 354 (355)
T ss_pred EccCCCCHHHHHHHHHHHHHHh
Confidence 9876 9999999999999874
No 294
>PRK06917 hypothetical protein; Provisional
Probab=99.61 E-value=9.8e-14 Score=141.39 Aligned_cols=262 Identities=13% Similarity=0.052 Sum_probs=163.7
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-------CCCCCCcEEEEeCCCCCChhhhhhhcCC---------------eEeeec--
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-------QDASEPISVVSAAPYYSSYPSITDCVKS---------------RLYKWA-- 219 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-------~gd~~~~~Vlv~~P~y~~~~~~~~~~g~---------------~~~~~~-- 219 (456)
+.+++++++++|++.+++.... ++.. +|+...-+|++....+..... ..++.+
T Consensus 92 ~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~---~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~ 168 (447)
T PRK06917 92 NWSFFVNSGSEANETAMKIAIQHFQERGIQGKH---KILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYC 168 (447)
T ss_pred CEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCC---EEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcc
Confidence 5899999999999999997632 2221 899999999997765443211 111111
Q ss_pred ----cC----------cccc----cc---CCCeEEEEcCCCC-CCcccch---------HHhhhcCcEEEeeecCCCCCC
Q 012785 220 ----GD----------AKRF----NK---DGPYIELVTSPNN-PDGSVRQ---------SVVNRSGGILVHDLAYYWPQY 268 (456)
Q Consensus 220 ----~d----------~~~l----~~---~~~~~i~v~~P~N-PtG~~~~---------~l~~~~~~~iI~De~y~~~~~ 268 (456)
.+ .+.+ +. ++..++++...+. --|...+ ++|+++|+++|.||++.+.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGR 248 (447)
T PRK06917 169 YRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGR 248 (447)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCc
Confidence 00 1111 11 2356666644343 3345444 389999999999999986544
Q ss_pred CCCCC-----CCCCcEEEecCccccCCCCc-eEEEEEEeCHHHHHHHHHH----HhhccCcCChHHHHHHHHHHHhhhCC
Q 012785 269 TSITY-----PADHDLMLFTVSKSTGHAGT-RIGWALVKDMEVAKKMTKY----IELNTIGVSKDSQLRAAKVLKVVSDS 338 (456)
Q Consensus 269 ~~~~~-----~~~~~i~i~S~SK~~g~~G~-RiG~l~~~~~~~~~~l~~~----~~~~~~~~s~~~q~~a~~~L~~~~~~ 338 (456)
++... .-..+| .+|+|.++ .|. .+|.+++. +++++.+... ....|++.++++..++.+.|+.+.+.
T Consensus 249 tG~~~a~~~~gv~PDi--~~~gK~l~-~G~~Pi~a~~~~-~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~ 324 (447)
T PRK06917 249 TGAMFAMEHWGVEPDI--MTLGKGLG-AGYTPIAATVVS-DRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKH 324 (447)
T ss_pred ccchhhHHhcCCCCCE--EEeeehhc-cCCcceEEEEEc-HHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHC
Confidence 43211 112334 56899998 885 99999996 8888877542 23358889999999999999876543
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC----------c---c
Q 012785 339 CKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE----------Q---E 405 (456)
Q Consensus 339 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~----------~---~ 405 (456)
+.+++..+.-+.-++.|.+..++.+.+.-.+..|.+ +.+.+. . .
T Consensus 325 ---------~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~--------------~~ie~~~~~~~~~~~~~~~~~ 381 (447)
T PRK06917 325 ---------NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLL--------------IGVEFVADKKTKQPFSKSQAV 381 (447)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceE--------------EEEEEeccCCcCCCCcchhHH
Confidence 233333333333333333333334433334445544 333331 0 1
Q ss_pred HHHHHHHHHhCCEEeecCCC-C-CCCCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 406 IEDCESFLKGNKILTRSGKH-F-GFSPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 406 ~~~~~~~l~~~gI~v~pg~~-f-g~~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
...+...+.++||++.|... . +...+.+|++-. .+++++++++++|.+++
T Consensus 382 ~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l 435 (447)
T PRK06917 382 ASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSV 435 (447)
T ss_pred HHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 34566778899999987421 1 223578999844 69999999999998876
No 295
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.61 E-value=6.1e-14 Score=142.05 Aligned_cols=255 Identities=11% Similarity=0.083 Sum_probs=163.0
Q ss_pred ceEEEccCHHHHHHHHHHHhcCC----CCCCCcEEEEeCCCCCChhhhhhhc-C---------------CeEeeecc---
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQ----DASEPISVVSAAPYYSSYPSITDCV-K---------------SRLYKWAG--- 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~----gd~~~~~Vlv~~P~y~~~~~~~~~~-g---------------~~~~~~~~--- 220 (456)
+.+++++++++|++.+++..... |.....+|+...-+|++....+... + ...++++.
T Consensus 105 ~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 184 (429)
T PRK06173 105 NKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKF 184 (429)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCccc
Confidence 58999999999999999876531 1111118999999999965433222 1 01111110
Q ss_pred -------Ccccc----c--cCCCeEEEEcCC-CCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC-----
Q 012785 221 -------DAKRF----N--KDGPYIELVTSP-NNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT----- 272 (456)
Q Consensus 221 -------d~~~l----~--~~~~~~i~v~~P-~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~----- 272 (456)
+.+.+ + ..+..++++..- ++-.|...+ ++|+++|+++|.||++.+.+.++-.
T Consensus 185 ~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~ 264 (429)
T PRK06173 185 GEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEH 264 (429)
T ss_pred chhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHh
Confidence 11112 1 124566776542 666676644 3899999999999999864433321
Q ss_pred CCCCCcEEEecCccccCCCC-ceEEEEEEeCHHHHHHHHH-----HHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcc
Q 012785 273 YPADHDLMLFTVSKSTGHAG-TRIGWALVKDMEVAKKMTK-----YIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSED 346 (456)
Q Consensus 273 ~~~~~~i~i~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~-----~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~ 346 (456)
..-..+|+ +|+|.++ .| +.++.++++ +++.+.+.. .....|++.++++..++.+.|+.+.+.
T Consensus 265 ~gv~PDiv--~~gK~l~-gG~~p~~a~~~~-~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~-------- 332 (429)
T PRK06173 265 AGVVPDIM--CIGKALT-GGYLTLSATITT-EAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLES-------- 332 (429)
T ss_pred cCCCCCEE--Eeehhhh-CCccccceEEec-HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC--------
Confidence 11123444 4999998 88 489999986 888887753 223357788999999999999876543
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhc---CCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEee
Q 012785 347 ECFFEFTNHQMSTRWKQLRMAVQKS---GLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTR 421 (456)
Q Consensus 347 ~~~l~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~ 421 (456)
..+++++++-+.+.+.|++. +.+.-.+..|. .+-+.+.. ....+.+.|.++||.+.
T Consensus 333 -----~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl--------------~~~iel~~~~~~~~i~~~l~e~Gi~v~ 393 (429)
T PRK06173 333 -----PWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGA--------------IGVVEMKEPVNMATLQPRFVEHGIWVR 393 (429)
T ss_pred -----CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccce--------------EEEEEeCCcccHHHHHHHHHHCCeEEE
Confidence 13444555555666666543 21211222333 34455532 34678888899999998
Q ss_pred cCCCCCCCCCeEEEEe--cCChhHHHHHHHHHHhhh
Q 012785 422 SGKHFGFSPKYVRISM--LDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 422 pg~~fg~~~~~iRis~--~~~~e~i~~~l~~L~~~l 455 (456)
+. .+.+|+.- ..+++++++++++|.+.+
T Consensus 394 ~~------g~~l~~~Ppl~it~~ei~~~~~~l~~~l 423 (429)
T PRK06173 394 PF------GKLVYIMPPFIISPDELSQLTSGLLRVL 423 (429)
T ss_pred ec------CCEEEEeCCccCCHHHHHHHHHHHHHHH
Confidence 73 25788884 359999999999999876
No 296
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.61 E-value=6.7e-13 Score=134.39 Aligned_cols=275 Identities=14% Similarity=0.114 Sum_probs=167.1
Q ss_pred CHHHHH----HHHHHHHHhcCccCCCceE-EEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCC-hhhhhhh--cCC
Q 012785 142 EPEFAK----EVVRLHKVVGNAITENHHI-VVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSS-YPSITDC--VKS 213 (456)
Q Consensus 142 ~~~lr~----aia~~~~~~g~~~~~~~~I-~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~-~~~~~~~--~g~ 213 (456)
..+|++ .++++++. +.. +++++++.|+..++.+|+++|| +|+++..+|.. +...++. .+.
T Consensus 72 ~~~lE~~~~~~la~l~g~--------~~alv~~~SG~~A~~~~l~al~~~GD----~Vl~~~~~~~~~~~~g~~~~~~~~ 139 (416)
T PRK13034 72 VDEVEALAIERAKQLFGC--------DYANVQPHSGSQANGAVYLALLKPGD----TILGMSLSHGGHLTHGAKVSLSGK 139 (416)
T ss_pred HHHHHHHHHHHHHHHhCC--------CceEEecCCcHHHHHHHHHHhcCCCC----EEEEcCccceeeeecCCcceeccc
Confidence 367777 88888763 245 4567889999999999999999 99999999876 2222221 111
Q ss_pred eE--eee-------ccCccccc----cCCCeEEEEcCCCCCCcccch---HHhhhcCcEEEeeecCCCCC-CCCCC--CC
Q 012785 214 RL--YKW-------AGDAKRFN----KDGPYIELVTSPNNPDGSVRQ---SVVNRSGGILVHDLAYYWPQ-YTSIT--YP 274 (456)
Q Consensus 214 ~~--~~~-------~~d~~~l~----~~~~~~i~v~~P~NPtG~~~~---~l~~~~~~~iI~De~y~~~~-~~~~~--~~ 274 (456)
.. ..+ ..|.+.++ ..++++|++..+.++.-..+. ++|+++|+++|+|+++.-.. ..+.. ..
T Consensus 140 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~ 219 (416)
T PRK13034 140 WYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPF 219 (416)
T ss_pred eeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCC
Confidence 11 122 24444443 235788888666654332333 47899999999999976211 11111 11
Q ss_pred CCCcEEEecCcccc-CCCCceEEEEEEeCHHHHHHHHHHHhhc-cCcCChHHHHHHH-HHHHhhhCCCCCCCCcchhHHH
Q 012785 275 ADHDLMLFTVSKST-GHAGTRIGWALVKDMEVAKKMTKYIELN-TIGVSKDSQLRAA-KVLKVVSDSCKPSGSEDECFFE 351 (456)
Q Consensus 275 ~~~~i~i~S~SK~~-g~~G~RiG~l~~~~~~~~~~l~~~~~~~-~~~~s~~~q~~a~-~~L~~~~~~~~~~~~~~~~~l~ 351 (456)
.+-+++++|++|.+ |..| |++++.++.+.++++...... ..+..+....++. ++++.+ +....
T Consensus 220 ~~~Di~~~s~~K~l~g~~G---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~-----------~~~~~ 285 (416)
T PRK13034 220 PHAHVVTTTTHKTLRGPRG---GMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEAL-----------QPEFK 285 (416)
T ss_pred CCceEEEEeCcccCCCCCC---eEEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHh-----------ChhHH
Confidence 23579999999998 4334 888876566666665543211 1112222333222 223211 11123
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc---cHHHHHHHHHhCCEEeecCC----
Q 012785 352 FTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ---EIEDCESFLKGNKILTRSGK---- 424 (456)
Q Consensus 352 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~~l~~~gI~v~pg~---- 424 (456)
+.++++.++.+++.+.|.+.+ +.+..+ + +.++-+++.+.. ....+.+.|+++||.+.+-.
T Consensus 286 ~~~~~l~~~a~~l~~~L~~~G-~~~~~~-~-----------~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~ 352 (416)
T PRK13034 286 TYAKQVIANAQALAEVLKERG-YDLVSG-G-----------TDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGD 352 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHcC-CEeccC-C-----------CCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCC
Confidence 456788889999999998774 444321 0 112245555532 44667788999999997521
Q ss_pred -CCCCCCCeEEEEec------CChhHHHHHHHHHHhhh
Q 012785 425 -HFGFSPKYVRISML------DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 425 -~fg~~~~~iRis~~------~~~e~i~~~l~~L~~~l 455 (456)
.+...+..+|+++. .++++++++++.|++++
T Consensus 353 ~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~ 390 (416)
T PRK13034 353 TESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVL 390 (416)
T ss_pred CcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 11113567999954 25899999999998876
No 297
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.61 E-value=1.1e-13 Score=141.48 Aligned_cols=257 Identities=11% Similarity=0.055 Sum_probs=161.3
Q ss_pred eEEEc-cCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhcC---------------CeEeeeccC------
Q 012785 165 HIVVG-TGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCVK---------------SRLYKWAGD------ 221 (456)
Q Consensus 165 ~I~~t-~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~g---------------~~~~~~~~d------ 221 (456)
.++++ ++++||.+.+++.... .|.. +|+...-+|++....+.... ...++++..
T Consensus 128 ~v~f~~~SGSEAve~AlklAr~~tgr~---~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 204 (464)
T PRK06938 128 KIQFCGPTGTDAVEAALKLVKTATGRS---TVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFG 204 (464)
T ss_pred eEEEeCCCcHHHHHHHHHHHHHhhCCC---eEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCcccccccc
Confidence 56554 7889999999987643 2322 89999999999876544421 111222110
Q ss_pred ----------cccccc---------CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCCC
Q 012785 222 ----------AKRFNK---------DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSITY 273 (456)
Q Consensus 222 ----------~~~l~~---------~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~~ 273 (456)
.+.++. .++.++++..-+.-.|.+.+ ++|+++|+++|.||++.+.+.++...
T Consensus 205 ~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~ 284 (464)
T PRK06938 205 LGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMF 284 (464)
T ss_pred CchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHH
Confidence 111211 13466666544554566554 38999999999999999765554221
Q ss_pred -----CCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchh
Q 012785 274 -----PADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDEC 348 (456)
Q Consensus 274 -----~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~ 348 (456)
.-..+|+ +++|.+| .|+++|.+++. +++ +.+.......|++.++++..++.+.|+.+.+. +
T Consensus 285 a~e~~gv~PDiv--~~gKglg-gG~PlsAv~~~-~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~---------~ 350 (464)
T PRK06938 285 AFEHAGIIPDVV--VLSKAIG-GSLPLAVVVYR-EWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKEH---------R 350 (464)
T ss_pred HHHhcCCCCCEE--Eeecccc-CCCceEEEeeh-hHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHHh---------H
Confidence 1123444 4799998 89999999996 664 55443345578999999999999999876543 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc----------------cHHHHHHH
Q 012785 349 FFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----------------EIEDCESF 412 (456)
Q Consensus 349 ~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----------------~~~~~~~~ 412 (456)
.+++.++.-+..++.|.+..++++.+.-.+..|.+ +.+.+.. ....+...
T Consensus 351 l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm--------------~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (464)
T PRK06938 351 LAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLM--------------LGVEIVDPQGEPDALGHPPANGELASLIQRE 416 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceE--------------EEEEeccCcccccccccCCccHHHHHHHHHH
Confidence 33434433333334444433444544444455544 3333310 12346677
Q ss_pred HHhCCEEeecCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhh
Q 012785 413 LKGNKILTRSGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 413 l~~~gI~v~pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l 455 (456)
+.++||.+.++.. ..+.+|+. +..++++++++++++.+.+
T Consensus 417 ~~~~Gll~~~~g~---~~~~l~~~Ppl~it~~eid~~~~~l~~~l 458 (464)
T PRK06938 417 CLRRGLILELGGR---HGSVVRFLPPLIITAEQIDEVAEIFAEAV 458 (464)
T ss_pred HHHCCeEEeecCC---CCCEEEEECCCccCHHHHHHHHHHHHHHH
Confidence 7899999987532 24678886 4459999999999998876
No 298
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.60 E-value=5e-14 Score=144.07 Aligned_cols=258 Identities=9% Similarity=0.018 Sum_probs=164.2
Q ss_pred ceEEEccCHHHHHHHHHHHhcCC----CCCCCcEEEEeCCCCCChhhhhhhcCCe---------------Eeeecc----
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQ----DASEPISVVSAAPYYSSYPSITDCVKSR---------------LYKWAG---- 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~----gd~~~~~Vlv~~P~y~~~~~~~~~~g~~---------------~~~~~~---- 220 (456)
+.+++++++++|++.+++..... |.....+|+...-+|++....+...+.. .++++-
T Consensus 130 ~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~ 209 (472)
T PRK08742 130 SKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLA 209 (472)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCcccc
Confidence 58999999999999999976431 2111118999999999987655443211 111110
Q ss_pred ------------Cccccc------cCCCeEEEEcC-CCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC
Q 012785 221 ------------DAKRFN------KDGPYIELVTS-PNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT 272 (456)
Q Consensus 221 ------------d~~~l~------~~~~~~i~v~~-P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~ 272 (456)
+.+.++ ..+..++++.. .++-.|...+ ++|+++|+++|.||++.+.+.++..
T Consensus 210 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~ 289 (472)
T PRK08742 210 EPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTL 289 (472)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccc
Confidence 011111 12456666644 2666676554 3899999999999999976555432
Q ss_pred CC-----CCCcEEEecCccccCCCC-ceEEEEEEeCHHHHHHHHH------HHhhccCcCChHHHHHHHHHHHhhhCCCC
Q 012785 273 YP-----ADHDLMLFTVSKSTGHAG-TRIGWALVKDMEVAKKMTK------YIELNTIGVSKDSQLRAAKVLKVVSDSCK 340 (456)
Q Consensus 273 ~~-----~~~~i~i~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~------~~~~~~~~~s~~~q~~a~~~L~~~~~~~~ 340 (456)
.. -..+|+ +++|.++ .| +.+|.++++ +++++.+.. .....|++.++++..++.+.|+.+.+.
T Consensus 290 ~a~e~~gv~PDiv--~~gKgl~-gG~~Plaav~~~-~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~-- 363 (472)
T PRK08742 290 FACEQAGVMPDLL--CLSKGLT-GGFLPLSAVLAT-QQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADD-- 363 (472)
T ss_pred hHHHhcCCCCCEE--EEccccc-CCCCCcceeecc-HHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHC--
Confidence 11 123344 4699998 88 499999996 888887753 124468899999999999999977653
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc----------c---HH
Q 012785 341 PSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----------E---IE 407 (456)
Q Consensus 341 ~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----------~---~~ 407 (456)
+.+++.++.-+..+ .+.+.+++++.+.-.+..|.+ +-+.+.. + ..
T Consensus 364 -------~l~~~~~~~g~~l~-~~~~~~~~~~~i~dvRG~Gl~--------------~giel~~~~~~~~~~~~~~~~~~ 421 (472)
T PRK08742 364 -------DVIARNQPTAARMT-QLAAQIGEHPHVADVRQAGMV--------------VAFELTRGGNKRTPFPPAARVGL 421 (472)
T ss_pred -------CHHHHHHHHHHHHH-HHHHHHhcCCCeeeEeccceE--------------EEEEeccCccccccCCchhHHHH
Confidence 23333332222222 233334445544344555554 3333311 0 13
Q ss_pred HHHHHHHhCCEEeecCCCCCCCCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 408 DCESFLKGNKILTRSGKHFGFSPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 408 ~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
.+.+.+.++||.+++. .+.|||.-. .+++++++++++|.+.+
T Consensus 422 ~~~~~~~~~Gll~~~~------g~vi~~~PpL~it~~ei~~~~~~l~~~l 465 (472)
T PRK08742 422 HAYRAALARGVVLRPL------GDVLYWMPPYCVDEAQLALLADTTRHAI 465 (472)
T ss_pred HHHHHHHHCCeEEEec------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 4567778999999872 267898843 49999999999999876
No 299
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.60 E-value=4.7e-14 Score=144.24 Aligned_cols=252 Identities=10% Similarity=0.046 Sum_probs=162.5
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-------CCCCCCcEEEEeCCCCCChhhhhhhcCC---------------eEeeec--
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-------QDASEPISVVSAAPYYSSYPSITDCVKS---------------RLYKWA-- 219 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-------~gd~~~~~Vlv~~P~y~~~~~~~~~~g~---------------~~~~~~-- 219 (456)
+.+++++++++|++.+++.... ++.. +|+...-+|++....+...+. ..++++
T Consensus 117 ~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~---~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~ 193 (460)
T PRK06916 117 KKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQ---RFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYT 193 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCc---EEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcc
Confidence 5899999999999999987653 3322 899999999997654433211 111111
Q ss_pred ------cC--------ccc----ccc--CCCeEEEEcC-CCCCCcccch---------HHhhhcCcEEEeeecCCCCCCC
Q 012785 220 ------GD--------AKR----FNK--DGPYIELVTS-PNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYT 269 (456)
Q Consensus 220 ------~d--------~~~----l~~--~~~~~i~v~~-P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~ 269 (456)
.+ .+. ++. .+..++++.. .+.-.|...+ ++|+++|+++|.||++.+.+.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRt 273 (460)
T PRK06916 194 YRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRT 273 (460)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcC
Confidence 01 111 111 2456676654 3666676654 3899999999999999875444
Q ss_pred CCC-----CCCCCcEEEecCccccCCCC-ceEEEEEEeCHHHHHHHHH-------HHhhccCcCChHHHHHHHHHHHhhh
Q 012785 270 SIT-----YPADHDLMLFTVSKSTGHAG-TRIGWALVKDMEVAKKMTK-------YIELNTIGVSKDSQLRAAKVLKVVS 336 (456)
Q Consensus 270 ~~~-----~~~~~~i~i~S~SK~~g~~G-~RiG~l~~~~~~~~~~l~~-------~~~~~~~~~s~~~q~~a~~~L~~~~ 336 (456)
+.. ..-..+|+ +++|.++ .| +.+|.++++ +++.+.+.. .....+++.++++..++.+.|+.+.
T Consensus 274 G~~~a~~~~gv~PDiv--~~gK~l~-gG~~Pi~av~~~-~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~ 349 (460)
T PRK06916 274 GKMFACEHENVTPDIM--TAGKGLT-GGYLPIAITVTT-DEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYE 349 (460)
T ss_pred chhhHHHhcCCCCCee--eeehhhh-cCccccceeeec-HHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 421 11123443 6899998 88 599999996 888887652 2234588889999999999998765
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh---cCCccccCCCCcccccccccCCCCCceEEeecCc---------
Q 012785 337 DSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQK---SGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--------- 404 (456)
Q Consensus 337 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--------- 404 (456)
+. +.+ ++++++-+.+.+.|++ .+.+.-.+..|.+ +-+.+..
T Consensus 350 ~~---------~l~----~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm--------------~giel~~~~~~~~~~~ 402 (460)
T PRK06916 350 KT---------NLI----EQVARKTEYVATQLEDLFALKHVGDIRQLGLM--------------VGIELVKNKETKEPFE 402 (460)
T ss_pred hc---------cHH----HHHHHHHHHHHHHHHHhhcCCCeEEeecCCce--------------eeEEeecccccccCCC
Confidence 43 233 3344444445555544 3323233444544 3333311
Q ss_pred -c---HHHHHHHHHhCCEEeecCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhh
Q 012785 405 -E---IEDCESFLKGNKILTRSGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 405 -~---~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l 455 (456)
+ ...+...+.++||++.|. .+.+|+. +..+++++++++++|.+.+
T Consensus 403 ~~~~~~~~i~~~~~~~Gvl~~~~------g~~l~~~Ppl~it~~~id~~~~~l~~~l 453 (460)
T PRK06916 403 WTERVGVQVCKRSRELGMLTRPL------GNTIVFMPPLASTIDELDEMLRILYKAI 453 (460)
T ss_pred chhhHHHHHHHHHHHCCeEEEec------CCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 0 245677788999999872 2567776 4459999999999999876
No 300
>PRK06148 hypothetical protein; Provisional
Probab=99.60 E-value=9.5e-14 Score=154.05 Aligned_cols=259 Identities=14% Similarity=0.095 Sum_probs=167.1
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhcCC-------------eE--e--------eec
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCVKS-------------RL--Y--------KWA 219 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~g~-------------~~--~--------~~~ 219 (456)
+.++++++++||++.+++.... .|.. +|+...-+|++....+..... .+ . ++.
T Consensus 681 ~~v~f~nSGsEA~e~AlklAr~~tGr~---~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 757 (1013)
T PRK06148 681 TVAFFVNSGSEANSLALRLARAHTGQR---DAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPER 757 (1013)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhcCCC---eEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCC
Confidence 5899999999999999997653 2322 799999999998754333210 00 0 111
Q ss_pred c-Cc-------ccc----c---c--CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCC-C
Q 012785 220 G-DA-------KRF----N---K--DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSI-T 272 (456)
Q Consensus 220 ~-d~-------~~l----~---~--~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~-~ 272 (456)
. |. +.+ + . .++.++++...+.-.|.+.+ ++|+++|+++|.||++.+.+.++. .
T Consensus 758 ~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~ 837 (1013)
T PRK06148 758 WPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHW 837 (1013)
T ss_pred CChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcc
Confidence 0 10 011 1 1 24566666544554566554 389999999999999987655542 1
Q ss_pred CC-----CCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHH-hhccCcCChHHHHHHHHHHHhhhCCCCCCCCcc
Q 012785 273 YP-----ADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYI-ELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSED 346 (456)
Q Consensus 273 ~~-----~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~-~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~ 346 (456)
.. -..+ +.+++|.+| .|+.+|.+++. +++++.+.... ...|++.++++..++.+.|+.+.+.
T Consensus 838 ~a~e~~gv~PD--ivt~gK~lg-gG~Plgav~~~-~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e-------- 905 (1013)
T PRK06148 838 WAFETQGVVPD--IVTMGKPIG-NGHPMGAVVTT-REIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDE-------- 905 (1013)
T ss_pred hhhhhcCCCcc--eeeeccccc-CCcceEEEEEc-HHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhc--------
Confidence 11 1223 466899999 89999999997 99988875432 3478999999999999999977553
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc----------cHHHHHHHHHhC
Q 012785 347 ECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----------EIEDCESFLKGN 416 (456)
Q Consensus 347 ~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----------~~~~~~~~l~~~ 416 (456)
+.+++.++.-...++.|.+..++++.+.-.+..|.+ +-+.+.. ....+...+.++
T Consensus 906 -~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~--------------~gvel~~~~~~~~~~~~~~~~i~~~~~~~ 970 (1013)
T PRK06148 906 -DLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLF--------------LGIELVTDRKTKAPATAIARYVKNGARER 970 (1013)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceE--------------EEEEecCCccccCccHHHHHHHHHHHHhC
Confidence 233333333333333344333344433334444443 4444421 134567778899
Q ss_pred CEEeecCCCCCCCCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 417 KILTRSGKHFGFSPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 417 gI~v~pg~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
||++.+. |...+.+||... .+++++++++++|.+++
T Consensus 971 Gvl~~~~---g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l 1008 (1013)
T PRK06148 971 GILIGTE---GPHDNVLKIRPPLIFSRADADHLLEVLDDVL 1008 (1013)
T ss_pred CeEEecc---CCCCCEEEEeCCccCCHHHHHHHHHHHHHHH
Confidence 9999874 223577888754 49999999999998876
No 301
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.58 E-value=4.6e-14 Score=130.59 Aligned_cols=305 Identities=13% Similarity=0.121 Sum_probs=205.4
Q ss_pred CCCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCH
Q 012785 93 GERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGS 172 (456)
Q Consensus 93 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~ 172 (456)
.-..++-|+++|..... ++++.....+.+. -+|.+.. .++.+-++++++ -+.++.++-+
T Consensus 67 aysaVnqGhchpki~~a--Lqeq~~kLtlssr----afYnd~~-------~~f~~~vt~lf~--------~~kvlpmnTG 125 (427)
T KOG1402|consen 67 AYSAVNQGHCHPKIIKA--LQEQADKLTLSSR----AFYNDVL-------GEFAEYVTKLFG--------YDKVLPMNTG 125 (427)
T ss_pred hhhhcccCCCCHHHHHH--HHHHHhHhhhhhH----HHhhhhH-------HHHHHHHHHhcC--------cceeeecccc
Confidence 34557888888765422 3333221112111 2466655 588888888885 3578888877
Q ss_pred HHHHHHHHHHhcCCCC------CCCcEEEEeCCCCCChhhhhhhcCCeE----------------eeeccCcccccc---
Q 012785 173 TQLFQAALYALSSQDA------SEPISVVSAAPYYSSYPSITDCVKSRL----------------YKWAGDAKRFNK--- 227 (456)
Q Consensus 173 ~~al~~~~~~l~~~gd------~~~~~Vlv~~P~y~~~~~~~~~~g~~~----------------~~~~~d~~~l~~--- 227 (456)
.|+.+.+++...+.|- ...+.|+...-+|++....+-.++... +++. |.++++.
T Consensus 126 aEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~-d~eale~~l~ 204 (427)
T KOG1402|consen 126 AEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYG-DAEALEVALK 204 (427)
T ss_pred hhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccC-CHHHHHHHhc
Confidence 9999999987753221 012367777888888776655554333 1221 4444432
Q ss_pred -CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC--CCCCC---cEEEecCccccCCCC
Q 012785 228 -DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT--YPADH---DLMLFTVSKSTGHAG 292 (456)
Q Consensus 228 -~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~--~~~~~---~i~i~S~SK~~g~~G 292 (456)
.+.+++++..-|...|++.+ ++|.+|++++|.||++.+...++-. -..++ +|++ |.|.++ .|
T Consensus 205 ~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivi--lgKalS-GG 281 (427)
T KOG1402|consen 205 SPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVI--LGKALS-GG 281 (427)
T ss_pred CCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEE--Eecccc-CC
Confidence 35566666555888899877 3999999999999999986666532 22232 4554 678887 55
Q ss_pred c-eEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Q 012785 293 T-RIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKS 371 (456)
Q Consensus 293 ~-RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~ 371 (456)
+ ++..+++. ++++..++...+..+++.+++..+++.+.|+.+.+. ++.++.+..-+.|+..|.++
T Consensus 282 ~~Pvsavl~~-~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~ee-------------kL~era~~lG~~l~~~L~~l 347 (427)
T KOG1402|consen 282 VYPVSAVLAD-DDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVEE-------------KLVERAAKLGEILRDQLNKL 347 (427)
T ss_pred eeeeEEEEec-HHHHhccCCCccccccCCChHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHhc
Confidence 4 78888884 889888888888899999999999999999976542 45555666667777777776
Q ss_pred C-C----ccccCCCCcccccccccCCCCCceEEeecC---c---cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEE--ec
Q 012785 372 G-L----FSVPELPSQFCTFLGRAFEPQPAFAWLKCE---Q---EIEDCESFLKGNKILTRSGKHFGFSPKYVRIS--ML 438 (456)
Q Consensus 372 ~-~----~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~---~---~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis--~~ 438 (456)
+ . ++..+..|.+ .-+.+. . +.-++.-.++++|++..| ...+.||+. +.
T Consensus 348 ~~~~p~~v~~VRGrGl~--------------~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkp-----tH~~IiRfaPPL~ 408 (427)
T KOG1402|consen 348 QKKFPHVVKEVRGRGLL--------------NAIVINPSKTSGQDAWDVCLALKENGLLAKP-----THGNIIRFAPPLV 408 (427)
T ss_pred cccccchhheeeccceE--------------EEEEeccccccchhHHHHHHcccccccccCC-----CCCCeEEecCCcc
Confidence 3 1 3445555543 333332 2 334456677899999888 346789998 44
Q ss_pred CChhHHHHHHHHHHhhh
Q 012785 439 DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 439 ~~~e~i~~~l~~L~~~l 455 (456)
.++++++++++.|.+.+
T Consensus 409 I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 409 ISEEDLREGIEAIEKTI 425 (427)
T ss_pred cCHHHHHHHHHHHHHHh
Confidence 58999999999998875
No 302
>PRK06149 hypothetical protein; Provisional
Probab=99.57 E-value=5.1e-13 Score=148.18 Aligned_cols=275 Identities=16% Similarity=0.163 Sum_probs=171.0
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhc-C--------
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCV-K-------- 212 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~-g-------- 212 (456)
.+|.+.+++.+.. .-+.+++++++++|.+.+++.... .|.. +|+..+-+|++....+... +
T Consensus 627 ~elae~L~~~~p~------~~~~v~f~~SGsEA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~ga~~~s~~~~~~~~~ 697 (972)
T PRK06149 627 AEFSERLAALAPD------GLDTVFLVNSGSEANDLAIRLAWAASGRR---DVVSVLEAYHGWTVATDAVSTSIADNPQA 697 (972)
T ss_pred HHHHHHHHHhCCC------CcCEEEEeCCchHHHHHHHHHHHHhcCCC---eEEEEeCCCCCcChhHhhhcCCccccccc
Confidence 4555555555421 135899999999999999985432 2221 7999999999866433211 0
Q ss_pred -------CeEee--------ecc-C-----ccc----cc-----cCCCeEEEEcCCCCCCcccch---------HHhhhc
Q 012785 213 -------SRLYK--------WAG-D-----AKR----FN-----KDGPYIELVTSPNNPDGSVRQ---------SVVNRS 253 (456)
Q Consensus 213 -------~~~~~--------~~~-d-----~~~----l~-----~~~~~~i~v~~P~NPtG~~~~---------~l~~~~ 253 (456)
...+. |.. | .+. ++ ..++.++++..-+.-.|.+.+ ++|+++
T Consensus 698 ~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~ 777 (972)
T PRK06149 698 LETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR 777 (972)
T ss_pred cCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHc
Confidence 01111 110 1 011 11 124456666444554565544 389999
Q ss_pred CcEEEeeecCCCCCCCCCC------CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHH-HhhccCcCChHHHH
Q 012785 254 GGILVHDLAYYWPQYTSIT------YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKY-IELNTIGVSKDSQL 326 (456)
Q Consensus 254 ~~~iI~De~y~~~~~~~~~------~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~-~~~~~~~~s~~~q~ 326 (456)
|+++|.||++.+.+.++-. ..-..+|+ +|+|.+| .|+.+|.+++. +++++.+... ....+++.++++..
T Consensus 778 g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv--t~gK~lg-~G~Pl~av~~~-~~i~~~~~~~~~~~sT~~gnP~~~a 853 (972)
T PRK06149 778 GGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII--TMAKGMG-NGHPLGAVITR-REIAEALEAEGYFFSSTGGSPVSCR 853 (972)
T ss_pred CCEEEEEeehhcCCccCccchhhhhcCCCCCEE--Eeccccc-CCeeeEEEEEc-HHHHhhhccCCcccCCCCCCHHHHH
Confidence 9999999999865544421 01123444 8999999 89999999996 8998887641 22356789999999
Q ss_pred HHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC---
Q 012785 327 RAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE--- 403 (456)
Q Consensus 327 ~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~--- 403 (456)
++.+.|+.+.+. +..++.++.-+..++.|.+..++.+.+...+..|.+ +-+.+.
T Consensus 854 aala~L~~i~~e---------~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~--------------~gvel~~~~ 910 (972)
T PRK06149 854 IGMAVLDVLREE---------KLQENARRVGDHLKARLEALADRHPLIGAVHGMGLY--------------LGVELVRDR 910 (972)
T ss_pred HHHHHHHHHHhc---------CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceE--------------EEEEEecCc
Confidence 999999976543 233333333333333344433344544444555544 444431
Q ss_pred ----c---cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEe--cCChhHHHHHHHHHHhhhC
Q 012785 404 ----Q---EIEDCESFLKGNKILTRSGKHFGFSPKYVRISM--LDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 404 ----~---~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~--~~~~e~i~~~l~~L~~~l~ 456 (456)
. ....+...+.++||++.+. |...+.+||.- ..+++++++++++|.++++
T Consensus 911 ~~~~~~~~~~~~i~~~l~~~Gvl~~~~---g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~ 969 (972)
T PRK06149 911 QTLEPATEETAAICDRLLELGVIMQPT---GDHLNILKIKPPLCLDRESADFFVDMLDRVLT 969 (972)
T ss_pred ccCCCChHHHHHHHHHHHhCCeEEeec---CCCCCEEEEECCCcCCHHHHHHHHHHHHHHHH
Confidence 1 1345677888999999874 33357889864 3599999999999998863
No 303
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.57 E-value=3.3e-13 Score=137.91 Aligned_cols=258 Identities=12% Similarity=0.100 Sum_probs=156.7
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhh--------------cCC------eEeeecc-C
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDC--------------VKS------RLYKWAG-D 221 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~--------------~g~------~~~~~~~-d 221 (456)
+.+.++++++||...+++.... .|.. +|+...-+|++....+.. .|. ..+.++. |
T Consensus 156 ~~v~f~~SGsEA~e~AlklAR~~tgr~---~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd 232 (474)
T PLN02482 156 EMVRFVNSGTEACMGVLRLARAYTGRE---KIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYND 232 (474)
T ss_pred CEEEEeCChHHHHHHHHHHHHHhcCCC---EEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCC
Confidence 6899999999999999987643 2322 899999999996532111 011 0111221 4
Q ss_pred cccccc------CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC---C--CCCCcEEE
Q 012785 222 AKRFNK------DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT---Y--PADHDLML 281 (456)
Q Consensus 222 ~~~l~~------~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~---~--~~~~~i~i 281 (456)
.+.++. .+..+|++...+.-.|.+.+ ++|+++|+++|.||++.+. ..+.. . .-..++
T Consensus 233 ~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv~PDi-- 309 (474)
T PLN02482 233 LEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGITPDL-- 309 (474)
T ss_pred hHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCCCCCE--
Confidence 444432 23456666554555676654 3899999999999999764 22211 0 112233
Q ss_pred ecCccccCCCCceEEEEEEeCHHHHHHHHHH---HhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHH
Q 012785 282 FTVSKSTGHAGTRIGWALVKDMEVAKKMTKY---IELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMS 358 (456)
Q Consensus 282 ~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~---~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~ 358 (456)
.+|+|.+| .|+.+|.++++ +++++.+... ....|++.++++..++.+.|+.+.+. +.+++..+.-+
T Consensus 310 ~t~gK~lg-gG~Pigav~g~-~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~---------~~~~~~~~~g~ 378 (474)
T PLN02482 310 TTLGKVIG-GGLPVGAYGGR-REIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQP---------GTYEYLDKITK 378 (474)
T ss_pred EEecchhh-CCCceEEEEEc-HHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhcc---------CHHHHHHHHHH
Confidence 58899999 89999999886 8998887532 23457888999999999999876542 23333333333
Q ss_pred HHHHHHHHHHHhcCCcccc-CCCCcccccccccCCCCCceEEeec-C---------cc---HHHHHHHHHhCCEEeecCC
Q 012785 359 TRWKQLRMAVQKSGLFSVP-ELPSQFCTFLGRAFEPQPAFAWLKC-E---------QE---IEDCESFLKGNKILTRSGK 424 (456)
Q Consensus 359 ~~~~~l~~~L~~~~~~~~~-~~~g~~~~~~~~~~~~~~~f~~~~~-~---------~~---~~~~~~~l~~~gI~v~pg~ 424 (456)
..++.|.+...+.+ ..+. ..-+++. -+.+.- + .+ ...+.+.+.++||++.|..
T Consensus 379 ~l~~~L~~l~~~~g-~~~~~~~v~g~~------------gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~ 445 (474)
T PLN02482 379 KLIQGILEAGKKAG-HEMCGGYISGMF------------GFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQ 445 (474)
T ss_pred HHHHHHHHHHHhcC-CCEEEcccceEE------------EEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccC
Confidence 33333443333322 1111 1112221 011111 0 01 2356677889999998732
Q ss_pred CCCCCCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 425 HFGFSPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 425 ~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
+. .++ +++..++++|+++++++.++++
T Consensus 446 -~~--~~~--psl~ht~~dId~~l~al~~~l~ 472 (474)
T PLN02482 446 -FE--AGF--TSLAHTEEDIDFTIAAAERVLA 472 (474)
T ss_pred -CC--CCc--CCCCCCHHHHHHHHHHHHHHHH
Confidence 11 112 5666699999999999998763
No 304
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.57 E-value=6.3e-13 Score=135.36 Aligned_cols=256 Identities=12% Similarity=0.087 Sum_probs=156.2
Q ss_pred ceEEEccCHHHHHHHHHHHhcC--------CCC--CCCcEEEEeCCCCCChhhhhhhcCC-eE-------------e---
Q 012785 164 HHIVVGTGSTQLFQAALYALSS--------QDA--SEPISVVSAAPYYSSYPSITDCVKS-RL-------------Y--- 216 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~--------~gd--~~~~~Vlv~~P~y~~~~~~~~~~g~-~~-------------~--- 216 (456)
++++++++++||++.+++.... .|. ....+|+...-+|++....+..... .. +
T Consensus 111 ~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~ 190 (443)
T PRK08297 111 PHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNP 190 (443)
T ss_pred CEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCC
Confidence 5899999999999999997732 121 0011799999999998765554321 10 0
Q ss_pred --eecc---C---c--------cc----cc--cCCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCC
Q 012785 217 --KWAG---D---A--------KR----FN--KDGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYW 265 (456)
Q Consensus 217 --~~~~---d---~--------~~----l~--~~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~ 265 (456)
.++. + . +. ++ ..++.++++...+.-.|...+ ++|+++|+++|.||++.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG 270 (443)
T PRK08297 191 KLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTG 270 (443)
T ss_pred CCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhc
Confidence 0010 1 0 00 11 124566666544544565533 389999999999999987
Q ss_pred CCCCCCC-----CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHH-----HHhhccCcCChHHHHHHHHHHHhh
Q 012785 266 PQYTSIT-----YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTK-----YIELNTIGVSKDSQLRAAKVLKVV 335 (456)
Q Consensus 266 ~~~~~~~-----~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~-----~~~~~~~~~s~~~q~~a~~~L~~~ 335 (456)
.+.++.. ..-..+|+ +|+|.++ +|.+++. +++.+.+.. .....|++.++++..++.+.|+.+
T Consensus 271 fGRtG~~~a~~~~gv~PDiv--~~gK~l~-----~~a~l~~-~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l 342 (443)
T PRK08297 271 VGLTGTAWAYQQLGVRPDIV--AFGKKTQ-----VCGIMAG-RRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVI 342 (443)
T ss_pred cCccchHHHHHhcCCCCCEE--Eeccccc-----ccceecc-hHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHH
Confidence 6554321 11123444 5899874 3444443 444332211 124568899999999999999876
Q ss_pred hCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCcc-ccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHH
Q 012785 336 SDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFS-VPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESF 412 (456)
Q Consensus 336 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~ 412 (456)
.+. +.+++..+.-+..++.+.+..++.+.+. ..++.|. ++.+.+++ ....+.+.
T Consensus 343 ~~~---------~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~--------------~~~i~~~~~~~~~~~~~~ 399 (443)
T PRK08297 343 EED---------GLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGL--------------MCAFDLPTTADRDEVIRR 399 (443)
T ss_pred Hhc---------CHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccce--------------EEEEEecCHHHHHHHHHH
Confidence 543 3444444444444444554444444321 3334444 45566643 24467777
Q ss_pred HHhCCEEeecCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhh
Q 012785 413 LKGNKILTRSGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 413 l~~~gI~v~pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l 455 (456)
+.++||++.|+. .+.+|++ +..+++++++++++|.+++
T Consensus 400 l~~~Gvl~~~~~-----~~~lr~~P~l~~t~~eid~~l~~l~~~l 439 (443)
T PRK08297 400 LWEEGVLVLPCG-----ERSIRFRPALTVTTEEIDAAIDALRRAL 439 (443)
T ss_pred HHHCCEEEecCC-----CCeEEEECCccCCHHHHHHHHHHHHHHH
Confidence 889999998842 3568884 5559999999999999876
No 305
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.57 E-value=4.9e-14 Score=124.17 Aligned_cols=146 Identities=19% Similarity=0.174 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChh-hhhhhcCCeEeeeccC
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYP-SITDCVKSRLYKWAGD 221 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~-~~~~~~g~~~~~~~~d 221 (456)
.++++.++++++. ..+++++++|+++++.+++.++..+++ +|++++|+|+... ..++..|+++..++.+
T Consensus 3 ~~~~~~l~~~~~~------~~~~~~~~~~~t~a~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 72 (170)
T cd01494 3 EELEEKLARLLQP------GNDKAVFVPSGTGANEAALLALLGPGD----EVIVDANGHGSRYWVAAELAGAKPVPVPVD 72 (170)
T ss_pred HHHHHHHHHHcCC------CCCcEEEeCCcHHHHHHHHHHhCCCCC----EEEEeecccceehhhHHHhcCCEEEEeccC
Confidence 6889999999851 346899999999999999999988888 9999999999988 8888889998876654
Q ss_pred cc--------ccc----cCCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCC---CCCCCCCcEEE
Q 012785 222 AK--------RFN----KDGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTS---ITYPADHDLML 281 (456)
Q Consensus 222 ~~--------~l~----~~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~---~~~~~~~~i~i 281 (456)
.. .++ ..+++++++++|+||+|...+ ++|+++++++|+|++|....... .....+.++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~ 152 (170)
T cd01494 73 DAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVT 152 (170)
T ss_pred CCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEE
Confidence 22 121 236789999999999999875 37889999999999999643332 11234568999
Q ss_pred ecCccccCCCCceEEEEEE
Q 012785 282 FTVSKSTGHAGTRIGWALV 300 (456)
Q Consensus 282 ~S~SK~~g~~G~RiG~l~~ 300 (456)
.|++|.++. .++|++++
T Consensus 153 ~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 153 FSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred EEcccccCC--CceEEEEe
Confidence 999999974 68999986
No 306
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.56 E-value=1.2e-13 Score=136.31 Aligned_cols=262 Identities=13% Similarity=0.101 Sum_probs=171.6
Q ss_pred CceEEEccCHHHHHHHHHHHhcC----CCCCCCcEEEEeCCCCCChhhhhhhcCC-e-----Ee----------eec---
Q 012785 163 NHHIVVGTGSTQLFQAALYALSS----QDASEPISVVSAAPYYSSYPSITDCVKS-R-----LY----------KWA--- 219 (456)
Q Consensus 163 ~~~I~~t~G~~~al~~~~~~l~~----~gd~~~~~Vlv~~P~y~~~~~~~~~~g~-~-----~~----------~~~--- 219 (456)
-++|++|+|++++++.+++.... .|..+..+++.-..+|++-.-.+...|. . .. +.+
T Consensus 105 l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y 184 (449)
T COG0161 105 LDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAY 184 (449)
T ss_pred ccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCccc
Confidence 46899999999999999987642 3433333699999999998776666544 1 11 001
Q ss_pred -------cCc------ccccc-------CCCeEEEEcCC-CCC-Ccccch---------HHhhhcCcEEEeeecCCCCCC
Q 012785 220 -------GDA------KRFNK-------DGPYIELVTSP-NNP-DGSVRQ---------SVVNRSGGILVHDLAYYWPQY 268 (456)
Q Consensus 220 -------~d~------~~l~~-------~~~~~i~v~~P-~NP-tG~~~~---------~l~~~~~~~iI~De~y~~~~~ 268 (456)
.+. +.++. ++..++++ .| ..- +|..++ ++|++||+++|.||+-.+.+.
T Consensus 185 ~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~-EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGR 263 (449)
T COG0161 185 RRGFFGEGDEEFAEAADELEALILEHGPETIAAFIV-EPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGR 263 (449)
T ss_pred ccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEe-cccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCc
Confidence 011 11111 23445555 55 444 677665 399999999999999998877
Q ss_pred CCCCCCCCC-cEE--EecCccccCCCCceEEEEEEeCHHHHHHHHHH-----HhhccCcCChHHHHHHHHHHHhhhCCCC
Q 012785 269 TSITYPADH-DLM--LFTVSKSTGHAGTRIGWALVKDMEVAKKMTKY-----IELNTIGVSKDSQLRAAKVLKVVSDSCK 340 (456)
Q Consensus 269 ~~~~~~~~~-~i~--i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~-----~~~~~~~~s~~~q~~a~~~L~~~~~~~~ 340 (456)
++-....++ .|. +-+++|.+.-.-+.+|.+++. +++.+.+..- .+..|++.+|++.+++.+.|+.++++
T Consensus 264 TG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~-~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e-- 340 (449)
T COG0161 264 TGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTS-DRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEE-- 340 (449)
T ss_pred CchhhhhhhcCCCCCeeeecccccccchhhHhHhhh-HHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhc--
Confidence 764322221 122 455899987455789988886 8898888764 44568899999999999999977653
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--c---------HHHH
Q 012785 341 PSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--E---------IEDC 409 (456)
Q Consensus 341 ~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~---------~~~~ 409 (456)
.++++.++.-....+.|.+.|.+++.+.-.+..|.+ .-+++.. . ...+
T Consensus 341 -------~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli--------------~~iElv~d~~t~~~f~~~~~~~~ 399 (449)
T COG0161 341 -------DLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLI--------------GAIELVADKATKTPFEARVGARV 399 (449)
T ss_pred -------CHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceE--------------EEEEEecccccccchhhhHHHHH
Confidence 455555544444444444444444444444444433 3444421 1 4567
Q ss_pred HHHHHhCCEEeecCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhh
Q 012785 410 ESFLKGNKILTRSGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 410 ~~~l~~~gI~v~pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l 455 (456)
...+.++|+.+||. | +.+=++ ++.++++++++++++++.+
T Consensus 400 ~~~~~e~Gl~iRp~---g---~~i~~~PPliit~~eid~l~~~l~~al 441 (449)
T COG0161 400 RAAALERGLLIRPL---G---DVIYLMPPLIITREEIDELVDALREAL 441 (449)
T ss_pred HHHHHHCCeEEeec---C---CEEEEcCCccCCHHHHHHHHHHHHHHH
Confidence 88889999999994 2 233333 3359999999999999876
No 307
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.55 E-value=5.2e-13 Score=135.26 Aligned_cols=255 Identities=11% Similarity=0.080 Sum_probs=157.2
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhh---hhhcCC-------e----------Eeeec-cC
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSI---TDCVKS-------R----------LYKWA-GD 221 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~---~~~~g~-------~----------~~~~~-~d 221 (456)
+.+.++++++||++.+++.... .|.. +|+...-+|++.... ....+. . ...++ .|
T Consensus 111 ~~v~f~~SGsEA~e~AiklAr~~tgr~---~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (433)
T PRK00615 111 HKIRFVSSGTEATMTAVRLARGITGRS---IIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYND 187 (433)
T ss_pred CEEEEeCchHHHHHHHHHHHHHhhCCC---EEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCC
Confidence 5899999999999999987643 2332 799889999996521 111110 0 01111 13
Q ss_pred cccccc------CCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC---C--CCCCcEEE
Q 012785 222 AKRFNK------DGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT---Y--PADHDLML 281 (456)
Q Consensus 222 ~~~l~~------~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~---~--~~~~~i~i 281 (456)
.+.++. .+..+|++...+.-.|...+ ++|+++|+++|.||++.+. ..+.. . .-..+|+
T Consensus 188 ~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv~PDi~- 265 (433)
T PRK00615 188 FQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPDIT- 265 (433)
T ss_pred HHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCCCCCeE-
Confidence 333321 23456666544555566554 3899999999999999754 22211 1 1123443
Q ss_pred ecCccccCCCCceEEEEEEeCHHHHHHHHHH---HhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHH
Q 012785 282 FTVSKSTGHAGTRIGWALVKDMEVAKKMTKY---IELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMS 358 (456)
Q Consensus 282 ~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~---~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~ 358 (456)
+|+|.+| .|+.+|+++++ +++++.+... ....+++.+++...++.+.|+.+.+. +.+++.++.-+
T Consensus 266 -~~gK~lg-gG~p~~av~~~-~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~---------~~~~~~~~~g~ 333 (433)
T PRK00615 266 -VYGKILG-GGLPAAAVVAH-KSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQ---------GFYTQLSTLEQ 333 (433)
T ss_pred -EEccccc-CCcceeeeeec-HHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcc---------cHHHHHHHHHH
Confidence 5899998 78999999996 8998887532 23357788999999999999876543 23344433333
Q ss_pred HHHHHHHHHHHhcCC-ccccCCCCcccccccccCCCCCceEEeecCc---------------cHHHHHHHHHhCCEEeec
Q 012785 359 TRWKQLRMAVQKSGL-FSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ---------------EIEDCESFLKGNKILTRS 422 (456)
Q Consensus 359 ~~~~~l~~~L~~~~~-~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~---------------~~~~~~~~l~~~gI~v~p 422 (456)
.-++.+.+.+++.+. +...+ .|.+ +.+.+.. ....+...|.++||.+.|
T Consensus 334 ~l~~~l~~~~~~~g~~v~~~r-~G~~--------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~ 398 (433)
T PRK00615 334 NFLSPIEEMIRSQGFPVSLVR-YGSM--------------FSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSP 398 (433)
T ss_pred HHHHHHHHHHHHcCCCeEEEe-eceE--------------EEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecC
Confidence 333444554444321 22233 3333 3333311 123577788899999987
Q ss_pred CCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 423 GKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 423 g~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
.. ++ ..+ ++...++++++++++++.+++
T Consensus 399 ~~-~~--~~~--ls~~ht~~did~~~~a~~~~~ 426 (433)
T PRK00615 399 SP-FE--ASF--LSSAHSMENLDYAQNVLIDSL 426 (433)
T ss_pred cc-cc--ccc--eecCCCHHHHHHHHHHHHHHH
Confidence 43 11 112 555569999999999998876
No 308
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.55 E-value=1.4e-12 Score=142.23 Aligned_cols=286 Identities=12% Similarity=0.026 Sum_probs=183.2
Q ss_pred CHHHHHHHHHHHHHhcCccCCCc-eEEEccCHHHHHHHHHHHh-cCCCCCCCcEEEEeCCCCCChhhh---hhhcCCeEe
Q 012785 142 EPEFAKEVVRLHKVVGNAITENH-HIVVGTGSTQLFQAALYAL-SSQDASEPISVVSAAPYYSSYPSI---TDCVKSRLY 216 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~-~I~~t~G~~~al~~~~~~l-~~~gd~~~~~Vlv~~P~y~~~~~~---~~~~g~~~~ 216 (456)
..+.|+.|+++++. .+++ .|++|+|+|+++++++..+ .++|| +|++..-.|+..... ++..|+++.
T Consensus 80 ~e~aR~~ia~~lga-----~~~~~~VvFtsnaT~alnlva~~l~~~~gd----~Iv~t~~eH~svl~~~~~a~~~G~~v~ 150 (805)
T PLN02724 80 IESARQQVLEYFNA-----PPSDYACVFTSGATAALKLVGETFPWSSES----HFCYTLENHNSVLGIREYALEKGAAAI 150 (805)
T ss_pred HHHHHHHHHHHhCC-----CccceEEEEeCChHHHHHHHHHHCCCCCCC----eEEEeeccccchHHHHHHHHHcCCeEE
Confidence 36778888888864 1234 5899999999999999887 57788 899987777665443 334587777
Q ss_pred eeccCc----------------ccccc-------------CCCeEEEEcCCCCCCcccch-H---Hhhhc---------C
Q 012785 217 KWAGDA----------------KRFNK-------------DGPYIELVTSPNNPDGSVRQ-S---VVNRS---------G 254 (456)
Q Consensus 217 ~~~~d~----------------~~l~~-------------~~~~~i~v~~P~NPtG~~~~-~---l~~~~---------~ 254 (456)
.++.+. +.++. .+++++.++.-+|-||..++ + .+++. +
T Consensus 151 ~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~ 230 (805)
T PLN02724 151 AVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGR 230 (805)
T ss_pred eccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcc
Confidence 665441 11221 23478889899999999988 2 23332 3
Q ss_pred cEEEeeecCCCCCCCCCCCCCCCcEEEecCccccC-CCCceEEEEEEeCHHHHHHHHHHHh-------------------
Q 012785 255 GILVHDLAYYWPQYTSITYPADHDLMLFTVSKSTG-HAGTRIGWALVKDMEVAKKMTKYIE------------------- 314 (456)
Q Consensus 255 ~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~RiG~l~~~~~~~~~~l~~~~~------------------- 314 (456)
+++++|-++.-.+..--....+-++++.|+.|.+| ..| +|.++++ +++.+.+.....
T Consensus 231 ~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G--~G~L~vr-~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~ 307 (805)
T PLN02724 231 WMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPTG--LGALLVR-RDAAKLLKKKYFGGGTVAASIADIDFVKRRE 307 (805)
T ss_pred eEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCCC--ceEEEEe-hhhhhhhcCCccCCCceEEEecccceeeccc
Confidence 57999999875433211133466899999999998 446 8999997 777665543210
Q ss_pred -----hccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcC------CccccCCCCcc
Q 012785 315 -----LNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSG------LFSVPELPSQF 383 (456)
Q Consensus 315 -----~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~------~~~~~~~~g~~ 383 (456)
+-....+.....++.++|+.+.+ --++.+.++.++..+++.+.|++++ .+.+..+.+..
T Consensus 308 ~~~~rfE~GT~n~~~i~~l~aal~~l~~----------ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~ 377 (805)
T PLN02724 308 RVEQRFEDGTISFLSIAALRHGFKLLNR----------LTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFK 377 (805)
T ss_pred cHHHHhcCCCcchhHHHHHHHHHHHHHH----------hChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCC
Confidence 11122344444455556654322 1245677778888888888888764 24443321000
Q ss_pred cccccccCCCCCceEEeec---Cc---cHHHHHHHHHhCCEEeecCCCCCC-----------------------------
Q 012785 384 CTFLGRAFEPQPAFAWLKC---EQ---EIEDCESFLKGNKILTRSGKHFGF----------------------------- 428 (456)
Q Consensus 384 ~~~~~~~~~~~~~f~~~~~---~~---~~~~~~~~l~~~gI~v~pg~~fg~----------------------------- 428 (456)
... ...+.-+-+.+ +. ...++..++.++||.++.|.++..
T Consensus 378 ----~~~-~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~ 452 (805)
T PLN02724 378 ----LEF-HIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQD 452 (805)
T ss_pred ----CCc-ccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhh
Confidence 000 01111222222 21 245577777889999999987631
Q ss_pred -----CCCeEEEEecC--ChhHHHHHHHHHHhh
Q 012785 429 -----SPKYVRISMLD--RDENYNLFVQRLSKI 454 (456)
Q Consensus 429 -----~~~~iRis~~~--~~e~i~~~l~~L~~~ 454 (456)
..+.+|+||+. +.+|++.+++.|++.
T Consensus 453 ~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~ 485 (805)
T PLN02724 453 VIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISS 485 (805)
T ss_pred eecCcccceEEEEcCccCCHHHHHHHHHHHHHH
Confidence 12789999975 899999999999885
No 309
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.55 E-value=7.5e-12 Score=122.27 Aligned_cols=278 Identities=15% Similarity=0.130 Sum_probs=179.5
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHh-cCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYAL-SSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l-~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~ 220 (456)
..+|++++++|++. .+.+.++++|.||.+++.+| ..+|| +|+++.-+|......+...|++++-+++
T Consensus 36 v~~FE~~~ae~~G~--------k~ava~~sgT~AL~laL~al~ig~GD----eVI~ps~TfvATan~i~~~Ga~PVFvDi 103 (374)
T COG0399 36 VRRFEQAFAEYLGV--------KYAVAVSSGTAALHLALLALAIGPGD----EVIVPSFTFVATANAVLLVGAKPVFVDI 103 (374)
T ss_pred HHHHHHHHHHHhCC--------CeEEEecChHHHHHHHHHhcCCCCCC----EEEecCCchHHHHHHHHHcCCeEEEEec
Confidence 37999999999974 58888888899999999977 58999 9999999999999999999999987766
Q ss_pred Cccc-------ccc---CCCeEEEEcCC-CCCCcccch---HHhhhcCcEEEeeecCC-CCCCCCCCCCCCCcEEEecC-
Q 012785 221 DAKR-------FNK---DGPYIELVTSP-NNPDGSVRQ---SVVNRSGGILVHDLAYY-WPQYTSITYPADHDLMLFTV- 284 (456)
Q Consensus 221 d~~~-------l~~---~~~~~i~v~~P-~NPtG~~~~---~l~~~~~~~iI~De~y~-~~~~~~~~~~~~~~i~i~S~- 284 (456)
|.+. ++. .++|+|+..+- .||. -|+ ++|++||++||+|-++. +..+.+-....-.++-++||
T Consensus 104 d~~T~nid~~~ie~aIt~~tKAIipVhl~G~~~--dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~ 181 (374)
T COG0399 104 DPDTLNIDPDLIEAAITPRTKAIIPVHLAGQPC--DMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFH 181 (374)
T ss_pred CCcccCCCHHHHHHHcccCCeEEEEehhccCCC--CHHHHHHHHHHcCCeEEEEcchhccCeecCcccccccceEEEEec
Confidence 6543 332 25788876553 4554 334 58999999999999887 33344433233345777777
Q ss_pred -ccccCCCCceEEEEEEeCHHHHHHHHHHHhhcc------------CcCC-hHHHHHHHHHHHhhhCCCCCCCCcchhHH
Q 012785 285 -SKSTGHAGTRIGWALVKDMEVAKKMTKYIELNT------------IGVS-KDSQLRAAKVLKVVSDSCKPSGSEDECFF 350 (456)
Q Consensus 285 -SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~------------~~~s-~~~q~~a~~~L~~~~~~~~~~~~~~~~~l 350 (456)
+|.+. .| --|.+++.|++++++++.++.... .|.+ .+.-..|+-.+..+ +.+
T Consensus 182 ~~K~it-tg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL------------~~l 247 (374)
T COG0399 182 ATKNLT-TG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQL------------ERL 247 (374)
T ss_pred CCCCcc-cc-CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHH------------HHH
Confidence 68887 55 679999999999999988764321 1111 11222222222211 123
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccCCCCc-ccccccccCCCCCceEEeecC---ccHHHHHHHHHhCCE----Eeec
Q 012785 351 EFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQ-FCTFLGRAFEPQPAFAWLKCE---QEIEDCESFLKGNKI----LTRS 422 (456)
Q Consensus 351 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~-~~~~~~~~~~~~~~f~~~~~~---~~~~~~~~~l~~~gI----~v~p 422 (456)
++..++=++..+...+.|++++.+.++....+ ..++. ...+.++ .+.+.+.+.|+++|| ..+|
T Consensus 248 ~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~---------~~~i~~~~~~~~R~~l~~~L~~~gi~~~~~~~P 318 (374)
T COG0399 248 DEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWH---------LYTILVDEEGISRDALMESLKEAGVGAVVYFRP 318 (374)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeee---------eeEEEecCCCCCHHHHHHHHHhCCCCceEEeec
Confidence 33333333444556667776654444433322 11110 1223333 246788999999954 4455
Q ss_pred CCCC------C-----C-------CCCeEEEEecC--ChhHHHHHHHHHHhhhC
Q 012785 423 GKHF------G-----F-------SPKYVRISMLD--RDENYNLFVQRLSKILS 456 (456)
Q Consensus 423 g~~f------g-----~-------~~~~iRis~~~--~~e~i~~~l~~L~~~l~ 456 (456)
-... + . ....+++.+-. +++++++.++.|++++.
T Consensus 319 ~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 319 LHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred cccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhc
Confidence 3221 0 0 13457776543 89999999999998863
No 310
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.54 E-value=7.5e-13 Score=134.36 Aligned_cols=256 Identities=11% Similarity=0.026 Sum_probs=160.3
Q ss_pred ceEEEccCHHHHHHHHHHHhcCC----CCCCCcEEEEeCCCCCChhhhhhhc-CCe---------------Eeeecc---
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQ----DASEPISVVSAAPYYSSYPSITDCV-KSR---------------LYKWAG--- 220 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~----gd~~~~~Vlv~~P~y~~~~~~~~~~-g~~---------------~~~~~~--- 220 (456)
+.++++++++++++.+++..... |.....+|+...-+|++....+... +.. ..+++.
T Consensus 106 ~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 185 (427)
T TIGR00508 106 DCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRF 185 (427)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccc
Confidence 58999999999999999865431 1100118999999999875443332 110 111110
Q ss_pred -------Cccccc----c--CCCeEEEEcCC-CCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCC-----
Q 012785 221 -------DAKRFN----K--DGPYIELVTSP-NNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSIT----- 272 (456)
Q Consensus 221 -------d~~~l~----~--~~~~~i~v~~P-~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~----- 272 (456)
|.+.++ . .+..+|++..- ++-.|.... ++|+++|+++|.||++.+.+.++-.
T Consensus 186 ~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~ 265 (427)
T TIGR00508 186 DEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEH 265 (427)
T ss_pred cchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhh
Confidence 111211 1 23455655432 555555433 3899999999999999764433311
Q ss_pred CCCCCcEEEecCccccCCCCc-eEEEEEEeCHHHHHHHHHH-----HhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcc
Q 012785 273 YPADHDLMLFTVSKSTGHAGT-RIGWALVKDMEVAKKMTKY-----IELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSED 346 (456)
Q Consensus 273 ~~~~~~i~i~S~SK~~g~~G~-RiG~l~~~~~~~~~~l~~~-----~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~ 346 (456)
..-..+|+ +++|.++ .|+ .++.++.+ +++.+.+... ....+++.++++..++.+.|+.+.+.
T Consensus 266 ~~v~pDi~--~~gK~l~-gG~~p~~a~~~~-~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~-------- 333 (427)
T TIGR00508 266 AGVVPDIL--CVGKALT-GGYMTLSATVTT-DKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEG-------- 333 (427)
T ss_pred cCCCCCEE--Eechhhh-cCcccceEEEEc-HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC--------
Confidence 11123444 4899997 885 78888886 8888888642 13356778999999999999866443
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCC---ccccCCCCcccccccccCCCCCceEEeecC--ccHHHHHHHHHhCCEEee
Q 012785 347 ECFFEFTNHQMSTRWKQLRMAVQKSGL---FSVPELPSQFCTFLGRAFEPQPAFAWLKCE--QEIEDCESFLKGNKILTR 421 (456)
Q Consensus 347 ~~~l~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~--~~~~~~~~~l~~~gI~v~ 421 (456)
++ .++++++.+.+.+.|+++.. +.-.+..|.+ .-+.+. .....+...+.++||.+.
T Consensus 334 -~~----~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~--------------~~i~~~~~~~~~~~~~~l~~~Gv~~~ 394 (427)
T TIGR00508 334 -EW----QKQVSAIENQLKRELSPLRKNPVVKDVRVLGAI--------------GVVEMYKPVNVEELQKKFVEQGVWIR 394 (427)
T ss_pred -CH----HHHHHHHHHHHHHHHHHhhcCCCEEeEeccccE--------------EEEEECCccCHHHHHHHHHHCCeEEE
Confidence 22 34555555666666655421 1111222333 333442 245678888999999997
Q ss_pred cCCCCCCCCCeEEEEec--CChhHHHHHHHHHHhhhC
Q 012785 422 SGKHFGFSPKYVRISML--DRDENYNLFVQRLSKILS 456 (456)
Q Consensus 422 pg~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l~ 456 (456)
+. .+.+|++.. .+++++++++++|.+.++
T Consensus 395 ~~------~~~l~~~ppl~~t~~~id~~~~~l~~~l~ 425 (427)
T TIGR00508 395 PF------GKLIYVMPPYIITTEQLQKLTAALIEALH 425 (427)
T ss_pred ec------CCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 62 246888765 589999999999998864
No 311
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.51 E-value=1e-11 Score=125.01 Aligned_cols=275 Identities=14% Similarity=0.082 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHH-HHHHHHHHHhcC---CCCCCCcEEEEeCCCCCChhhhhhhcCCeEeee
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGST-QLFQAALYALSS---QDASEPISVVSAAPYYSSYPSITDCVKSRLYKW 218 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~-~al~~~~~~l~~---~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~ 218 (456)
.+|.+.++++++. . .-+..++++|+| .++.+++.++.. +|+ .|+++.-++......+...|++++.+
T Consensus 108 ~~~e~~~~~~~G~---~--~~~~a~~v~~~Tg~al~laL~alr~~~~~gd----~VI~p~~th~S~~kAi~~~G~~pv~V 178 (444)
T TIGR03531 108 NKLVKDFLKLLGL---R--SIKSAFVVPLATGMSLSLCLSALRHKRPKAK----YVIWPRIDQKSCIKAISTAGFEPRVI 178 (444)
T ss_pred HHHHHHHHHHcCC---C--CCCEEEEECCHHHHHHHHHHHHcCCcCCCCC----EEEEECcChHHHHHHHHHcCCeEEEe
Confidence 4555555555543 2 124688888888 688888877753 477 99999999999999999999988766
Q ss_pred c---------cCcccccc---C---CCeEEEEcCCC-CCCcccch-----HHhhhcCcEEEeeecCCCCC--CCCCC--C
Q 012785 219 A---------GDAKRFNK---D---GPYIELVTSPN-NPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ--YTSIT--Y 273 (456)
Q Consensus 219 ~---------~d~~~l~~---~---~~~~i~v~~P~-NPtG~~~~-----~l~~~~~~~iI~De~y~~~~--~~~~~--~ 273 (456)
+ +|.+.++. + +..++++++|+ +++|..-+ ++|+++|+++|+|++|.... +..+. .
T Consensus 179 d~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g 258 (444)
T TIGR03531 179 ETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKA 258 (444)
T ss_pred eeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhcc
Confidence 5 23443432 1 44667777775 34444322 48999999999999998522 11111 1
Q ss_pred C-CCC-cEEEecCccccCCCCceEEEEE-EeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHH
Q 012785 274 P-ADH-DLMLFTVSKSTGHAGTRIGWAL-VKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFF 350 (456)
Q Consensus 274 ~-~~~-~i~i~S~SK~~g~~G~RiG~l~-~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l 350 (456)
. .++ ++++.|++|.+..||. |+++ ++|+++++.+..... ....+.+.|.+...++. .+ .+.+
T Consensus 259 ~~~Grad~vv~s~hK~l~~pg~--Gg~I~~~d~el~~~i~~~y~--g~~~~s~~~~~~~~ll~---~G--------~~g~ 323 (444)
T TIGR03531 259 IKVGRVDAVVSSTDKNFMVPVG--GAIIYSFDENFIQEISKSYP--GRASASPSLDVLITLLS---LG--------SKGY 323 (444)
T ss_pred ccccCCCeEEEeCccCCCCCCC--EEEEEECCHHHHHHHHHhcc--CCCCChHHHHHHHHHHH---hC--------HHHH
Confidence 1 223 7889999999988876 5554 767899888876532 23345577877777776 33 6788
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC---CccccCCCCcccccccccCCCCCce--EEeecC----ccHHHHHHHHHhCCEE--
Q 012785 351 EFTNHQMSTRWKQLRMAVQKSG---LFSVPELPSQFCTFLGRAFEPQPAF--AWLKCE----QEIEDCESFLKGNKIL-- 419 (456)
Q Consensus 351 ~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~g~~~~~~~~~~~~~~~f--~~~~~~----~~~~~~~~~l~~~gI~-- 419 (456)
+++.++.+++++.+.+.|+++. +..+.. ...|. +-+.+. .+...+-..|-.++|.
T Consensus 324 ~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~--------------~~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v~g~ 389 (444)
T TIGR03531 324 LELLKERKEMYKYLKELLQKLAERHGERLLD--------------TPENPISSAMTLSTLKGKDPTMLGSMLYSRRVTGP 389 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCcEeec--------------CCCCceeEEEecccccccCHHHHHHHHHhCCCCCc
Confidence 8899999999999999998752 112211 11111 222232 2455666666666662
Q ss_pred --eecCC-------CC---CCC-----CCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 420 --TRSGK-------HF---GFS-----PKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 420 --v~pg~-------~f---g~~-----~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
|.||. .| |.. ..|+-++.+ .+++|++.++++|.+.+
T Consensus 390 r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 390 RVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred eeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 45666 23 221 125544433 48999999999999864
No 312
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.50 E-value=3.7e-12 Score=124.48 Aligned_cols=275 Identities=13% Similarity=0.134 Sum_probs=168.7
Q ss_pred HHHHHHHHHHH-HhcCccCCCceEEEccCHHHHHHHHHHHhcC--CCCCCCcEEEEeCCCCCChhhhhhh-cC--Ce---
Q 012785 144 EFAKEVVRLHK-VVGNAITENHHIVVGTGSTQLFQAALYALSS--QDASEPISVVSAAPYYSSYPSITDC-VK--SR--- 214 (456)
Q Consensus 144 ~lr~aia~~~~-~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~--~gd~~~~~Vlv~~P~y~~~~~~~~~-~g--~~--- 214 (456)
+++-.+|+.+. +.+ .-+.|-++|.+|||...+++.... ..| +|+..+=+|++....+.. .| ..
T Consensus 93 e~Ei~~Aell~~~~p----~~e~vrfvnSGTEAtmsAiRlARa~TgR~----kIikF~G~YHG~~D~~lv~agsg~~t~g 164 (432)
T COG0001 93 ELEVELAELLIERVP----SIEKVRFVNSGTEATMSAIRLARAYTGRD----KIIKFEGCYHGHSDSLLVKAGSGAATLG 164 (432)
T ss_pred HHHHHHHHHHHHhcC----cccEEEEecchhHHHHHHHHHHHHhhCCC----eEEEEcCCCCCCccHHHhhcCcCcccCC
Confidence 44555555552 211 126899999999999999887643 334 899999999997765543 22 11
Q ss_pred ----------------EeeeccCcccccc------CCCeEEEEcC-CCCCCcccch---------HHhhhcCcEEEeeec
Q 012785 215 ----------------LYKWAGDAKRFNK------DGPYIELVTS-PNNPDGSVRQ---------SVVNRSGGILVHDLA 262 (456)
Q Consensus 215 ----------------~~~~~~d~~~l~~------~~~~~i~v~~-P~NPtG~~~~---------~l~~~~~~~iI~De~ 262 (456)
+++|+ |.+.++. ++..+|++.. +.| -|.+.+ ++|+++|+++|.||+
T Consensus 165 ~p~s~Gvp~~~a~~ti~~~yN-D~~al~~~~~~~g~~IAaVIvEPv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEV 242 (432)
T COG0001 165 SPSSPGVPADVAKHTLVLPYN-DLEALEEAFEEYGDDIAAVIVEPVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEV 242 (432)
T ss_pred CCCCCCCChhhhccEEEecCC-CHHHHHHHHHHcCCcEEEEEeccccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecc
Confidence 01222 5555543 2455666633 355 466655 389999999999999
Q ss_pred CCCCCCC--CCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHH---HhhccCcCChHHHHHHHHHHHhhhC
Q 012785 263 YYWPQYT--SITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKY---IELNTIGVSKDSQLRAAKVLKVVSD 337 (456)
Q Consensus 263 y~~~~~~--~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~---~~~~~~~~s~~~q~~a~~~L~~~~~ 337 (456)
-.+.... +....++-.==+.+|.|..| .|+.+|..-++ +++++.+... -+..|++.++++..+..+.|+.+..
T Consensus 243 iTGFR~~~gGaq~~~gi~PDlttlGKiIG-GGlP~ga~gGr-~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~ 320 (432)
T COG0001 243 ITGFRVALGGAQGYYGVEPDLTTLGKIIG-GGLPIGAFGGR-AEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMT 320 (432)
T ss_pred hhhcccCCcccccccCcCcchhhhhhhhc-CCcceeeeccH-HHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHh
Confidence 8753221 11111111111567999999 99999999997 8998876543 2346889999999999999986554
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCC-ccccCCCCcccccccccCCCCCceEEeecC---------cc--
Q 012785 338 SCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGL-FSVPELPSQFCTFLGRAFEPQPAFAWLKCE---------QE-- 405 (456)
Q Consensus 338 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~---------~~-- 405 (456)
. +...+++.+.-.+.++-+.+.+.+.+. +.+... |++.. +.+-+.+ .+
T Consensus 321 ~--------~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~-gsm~~-----------i~F~~~~~~n~~da~~sd~~ 380 (432)
T COG0001 321 E--------EGVYERLDALGERLAEGLRAAAERHGIPLTVNRV-GSMFG-----------IFFTEEGVRNYADAKRSDVE 380 (432)
T ss_pred c--------ccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeee-cceEE-----------EEecCCCCCCHHHHHhhchH
Confidence 2 123344444444444444455555442 333333 33322 1121211 01
Q ss_pred -HHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 406 -IEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 406 -~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
...+.+.+.++||++.|+. | +..=+|.+.++++++..++++.+++
T Consensus 381 ~~~~~~~~~l~~GV~l~ps~-~----ea~flS~ahte~di~~~~~a~~~~~ 426 (432)
T COG0001 381 RFAKFFHHLLNRGVYLAPSQ-F----EAGFLSTAHTEEDIDRTLEAADEAF 426 (432)
T ss_pred HHHHHHHHHHhCCcccCCcc-c----cceeeecccCHHHHHHHHHHHHHHH
Confidence 2234457889999999943 2 1223676679999999999988765
No 313
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.50 E-value=8.6e-12 Score=127.83 Aligned_cols=271 Identities=13% Similarity=0.075 Sum_probs=166.6
Q ss_pred HHHHHHHHHHhcCccCCCceEEEc---cCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhc----------C
Q 012785 146 AKEVVRLHKVVGNAITENHHIVVG---TGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCV----------K 212 (456)
Q Consensus 146 r~aia~~~~~~g~~~~~~~~I~~t---~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~----------g 212 (456)
|+.++++++. +++++.++ +|+++++.+++.+|.++|| +|++....+.......... +
T Consensus 86 r~~~a~lf~a------~~~~~~~~~~~~sgt~an~~v~~al~~~gd----~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~ 155 (452)
T PTZ00094 86 QKRALEAFGL------DPEEWGVNVQPYSGSPANFAVYTALLQPHD----RIMGLDLPSGGHLTHGFYTAKKKVSATSIY 155 (452)
T ss_pred HHHHHHHhCC------CcccceeecCCCchHHHHHHHHHHhcCCCC----EEEecccccCCcccccccccccccccceee
Confidence 3455555543 34456565 7888999999999999999 9999877776654433111 1
Q ss_pred CeEeeecc------Ccccccc----CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCC----CCCC
Q 012785 213 SRLYKWAG------DAKRFNK----DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYT----SITY 273 (456)
Q Consensus 213 ~~~~~~~~------d~~~l~~----~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~----~~~~ 273 (456)
.++..++. |.+.++. .+++++++.+ +.+|...+ ++|+++|+++++|+++.-.... +.+
T Consensus 156 ~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~~--s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~- 232 (452)
T PTZ00094 156 FESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAGA--SAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSP- 232 (452)
T ss_pred eeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEeC--CCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCC-
Confidence 22223333 4444432 2567766643 34887766 4899999999999999742211 111
Q ss_pred CCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHh-----hccCcCChHHHHHHHHHHHhhhCCCCCCCCcchh
Q 012785 274 PADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIE-----LNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDEC 348 (456)
Q Consensus 274 ~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~-----~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~ 348 (456)
..+-+++++|.+|+++-|. .|++++. +++.+.+..... ....+.+.....++.+.++.+.. .
T Consensus 233 ~~~~D~l~~S~hK~l~GP~--Gg~l~~~-~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~----------~ 299 (452)
T PTZ00094 233 FPYADVVTTTTHKSLRGPR--SGLIFYR-KKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQS----------P 299 (452)
T ss_pred CCCCcEEEcCCccCCCCCC--ceEEEEe-cccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhC----------h
Confidence 1245799999999773132 4888886 555443332211 11113444444555555654321 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeec--Cc-cHHHHHHHHHhCCEEe-ecCC
Q 012785 349 FFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKC--EQ-EIEDCESFLKGNKILT-RSGK 424 (456)
Q Consensus 349 ~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~--~~-~~~~~~~~l~~~gI~v-~pg~ 424 (456)
..+..++++.++.+.+.+.|.+.+ +.+..+... + ....+.+ ++ +.+.+...|.++||.+ +++.
T Consensus 300 ~~~~~~~~i~~l~~~l~~~L~~~g-~~v~~~~~~----------~--~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~ 366 (452)
T PTZ00094 300 EWKEYAKQVLKNAKALAAALEKRG-YDLVTGGTD----------N--HLVLVDLRPFGITGSKMEKLLDAVNISVNKNTI 366 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCC-cEEecCCCC----------C--ceEeecCCcCCCCHHHHHHHHHHCCcEEecccC
Confidence 345677888889999999997753 444322100 0 0233333 22 5677888898899999 5555
Q ss_pred CCCC---CCCeEEEEecC------ChhHHHHHHHHHHhhh
Q 012785 425 HFGF---SPKYVRISMLD------RDENYNLFVQRLSKIL 455 (456)
Q Consensus 425 ~fg~---~~~~iRis~~~------~~e~i~~~l~~L~~~l 455 (456)
.+.. .++.||+++.. ++++++.+++.|++++
T Consensus 367 p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~ 406 (452)
T PTZ00094 367 PGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAV 406 (452)
T ss_pred CCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 4432 35799999742 3899999999998875
No 314
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.49 E-value=1.1e-11 Score=124.28 Aligned_cols=279 Identities=11% Similarity=0.011 Sum_probs=171.2
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEcc-CHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhh--hhhhcCC-eEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGT-GSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPS--ITDCVKS-RLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~-G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~--~~~~~g~-~~~~ 217 (456)
..+.|+.++++++. .++++|++++ ++|.++++++..|.++++. .|++ .-.|+.... ..+..|+ ++..
T Consensus 50 ~~~~r~~l~~l~~~-----~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~---~vi~-~g~f~~~~~~~~~~~~g~~~v~~ 120 (378)
T PRK03080 50 LKRVIEGTRELLSL-----PEGYEVGIVPGSDTGAWEMALWSLLGARRV---DHLA-WESFGSKWATDVVKQLKLEDPRV 120 (378)
T ss_pred HHHHHHHHHHHhCC-----CCCceEEEECCchHHHHHHHHHhcCCCCcc---eEEE-eCHHHHHHHHHHHhhcCCCCceE
Confidence 35666667766653 1235788775 8999999999999864330 4443 334433222 2355687 6665
Q ss_pred eccC------ccccccCCCeEEEEcCCCCCCcccch--HHhh-hcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCcccc
Q 012785 218 WAGD------AKRFNKDGPYIELVTSPNNPDGSVRQ--SVVN-RSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKST 288 (456)
Q Consensus 218 ~~~d------~~~l~~~~~~~i~v~~P~NPtG~~~~--~l~~-~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~ 288 (456)
++.+ .+.++. ++.|.++...|.||...+ ++++ ++|+++|+|-+..-. ..++. ..+-+++++|.-|.+
T Consensus 121 ~~~~~g~~~d~~~i~~--~~~V~~~h~~t~tG~~~pi~~I~~~~~g~~~vVDa~qs~G-~~pid-v~~iD~~~~s~~K~l 196 (378)
T PRK03080 121 LEADYGSLPDLSAVDF--DRDVVFTWNGTTTGVRVPVARWIGADREGLTICDATSAAF-ALPLD-WSKLDVYTFSWQKVL 196 (378)
T ss_pred eccCCCCCCCHhhcCC--CCCEEEEecCCccceeccchhhccccCCCeEEEecccccc-cCCCC-HHHCcEEEEehhhhC
Confidence 5433 333332 456788888999999987 4554 579999999987732 22221 112479999999988
Q ss_pred CC-CCceEEEEEEeCHHHHHHHHHHH----------------------hhccCcCCh-HHHHHHHHHHHhhhCCCCCCCC
Q 012785 289 GH-AGTRIGWALVKDMEVAKKMTKYI----------------------ELNTIGVSK-DSQLRAAKVLKVVSDSCKPSGS 344 (456)
Q Consensus 289 g~-~G~RiG~l~~~~~~~~~~l~~~~----------------------~~~~~~~s~-~~q~~a~~~L~~~~~~~~~~~~ 344 (456)
+. +| +|++++. ++..+++.... ...+.+.++ ....++.+.|+.+.+.
T Consensus 197 ~~P~G--~g~l~v~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~------ 267 (378)
T PRK03080 197 GGEGG--HGMAILS-PRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSI------ 267 (378)
T ss_pred CCCCc--eEEEEEC-HHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHc------
Confidence 53 67 8999996 88877765321 001122232 2333334555543221
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc----cHHHHHHHHHhCCEEe
Q 012785 345 EDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----EIEDCESFLKGNKILT 420 (456)
Q Consensus 345 ~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----~~~~~~~~l~~~gI~v 420 (456)
.-++.+.++.++..+++++.|++++.+.+..+.... ..+..+-+.+++ ....+...+.++||.+
T Consensus 268 ---gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~---------~s~~i~~~~~~~~~~~~~~~~~~~l~~~~i~v 335 (378)
T PRK03080 268 ---GGLDALIARTAANASVLYDWAEKTPWATPLVADPAT---------RSNTSVTLDFVDAQAAVDAAAVAKLLRENGAV 335 (378)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccc---------cCccEEEEEcCCchHHHHHHHHHHHHHcCCee
Confidence 025677888888889999999887754443211110 011124445554 2233444555678998
Q ss_pred ecCCCCCCCCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 421 RSGKHFGFSPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 421 ~pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
+.|.. +...+.+|+|+.. ++++++.+++.|++++
T Consensus 336 ~~g~~-~~~~~~vRis~~~~~t~~di~~l~~al~~~~ 371 (378)
T PRK03080 336 DIEPY-RDAPNGLRIWCGPTVEPADVEALTPWLDWAF 371 (378)
T ss_pred ccccc-cCCCCcEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 87653 2235789999764 8999999999999875
No 315
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.49 E-value=6.7e-12 Score=125.14 Aligned_cols=271 Identities=16% Similarity=0.135 Sum_probs=173.9
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHh-cCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYAL-SSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l-~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~ 220 (456)
..+|+++++++++. ++++.+++++.||.+++.++ .++|| +|+++.-+|+.....+...|++++.+++
T Consensus 27 ~~~fE~~~a~~~g~--------~~~~~~~sgt~Al~~al~~l~~~~gd----eVi~p~~t~~~~~~ai~~~G~~pv~~Di 94 (363)
T PF01041_consen 27 VEEFEKEFAEYFGV--------KYAVAVSSGTSALHLALRALGLGPGD----EVIVPAYTFPATASAILWAGAEPVFVDI 94 (363)
T ss_dssp HHHHHHHHHHHHTS--------SEEEEESSHHHHHHHHHHHTTGGTTS----EEEEESSS-THHHHHHHHTT-EEEEE-B
T ss_pred HHHHHHHHHHHhCC--------CeEEEeCChhHHHHHHHHhcCCCcCc----eEecCCCcchHHHHHHHHhccEEEEEec
Confidence 47999999999973 58999999999999999998 46899 9999999999999999999999997776
Q ss_pred Ccccc-------cc---CCCeEEEEcCC-CCCCcccch---HHhhhcCcEEEeeecCCCC-CCCCCCCCCCCcEEEecC-
Q 012785 221 DAKRF-------NK---DGPYIELVTSP-NNPDGSVRQ---SVVNRSGGILVHDLAYYWP-QYTSITYPADHDLMLFTV- 284 (456)
Q Consensus 221 d~~~l-------~~---~~~~~i~v~~P-~NPtG~~~~---~l~~~~~~~iI~De~y~~~-~~~~~~~~~~~~i~i~S~- 284 (456)
|.+.+ +. .++++|++.+. .+|. -++ ++|+++|++||+|-++.-. .+.+.....-.++.++||
T Consensus 95 ~~~~~~id~~~~~~~i~~~t~ai~~~h~~G~~~--d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf~ 172 (363)
T PF01041_consen 95 DPETLNIDPEALEKAITPKTKAILVVHLFGNPA--DMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFGDIAIFSFH 172 (363)
T ss_dssp ETTTSSB-HHHHHHHHHTTEEEEEEE-GGGB-----HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSSSEEEEESS
T ss_pred cCCcCCcCHHHHHHHhccCccEEEEecCCCCcc--cHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCCCceEecCC
Confidence 65433 22 36788887664 3443 233 4899999999999998732 222222223347888888
Q ss_pred -ccccCCCCceEEEEEEeCHHHHHHHHHHHhhc-----------------cCcCChHHHHHHHHHHHhhhCCCCCCCCcc
Q 012785 285 -SKSTGHAGTRIGWALVKDMEVAKKMTKYIELN-----------------TIGVSKDSQLRAAKVLKVVSDSCKPSGSED 346 (456)
Q Consensus 285 -SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~-----------------~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~ 346 (456)
+|.+. .---|.+++.|+++.++++.++... .+..+.+....+..-|+
T Consensus 173 ~~K~i~--~geGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~------------- 237 (363)
T PF01041_consen 173 PTKIIT--TGEGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLK------------- 237 (363)
T ss_dssp TTSSS---SSS-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHH-------------
T ss_pred CCCCCc--CCCCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHH-------------
Confidence 58774 3345999999999999998876422 12344444444444343
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCccc-cCCCCcc-cccccccCCCCCceEEeecCc----cHHHHHHHHHhCCEEe
Q 012785 347 ECFFEFTNHQMSTRWKQLRMAVQKSGLFSV-PELPSQF-CTFLGRAFEPQPAFAWLKCEQ----EIEDCESFLKGNKILT 420 (456)
Q Consensus 347 ~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~g~~-~~~~~~~~~~~~~f~~~~~~~----~~~~~~~~l~~~gI~v 420 (456)
.++...+.-+++.+.+.+.|.+.+.+.. ..+.+.. .++. .+.+.+++ +.+.+.+.|+++||.+
T Consensus 238 --~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~---------~f~i~~~~~~~~~rd~l~~~L~~~GI~~ 306 (363)
T PF01041_consen 238 --RLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYY---------RFPIRLPDEALADRDELVEALRARGIET 306 (363)
T ss_dssp --THHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCES---------SEEEEETCCGCSTHHHHHHHHHHTTBEE
T ss_pred --HhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccc---------cccccccccccchHHHHHHHHHHCCCcc
Confidence 2344444555666777788888765433 2222221 1111 23444443 4678999999999999
Q ss_pred ecCCC--CC------C---------------CCCeEEEEecC--ChhHHHHHHHHHH
Q 012785 421 RSGKH--FG------F---------------SPKYVRISMLD--RDENYNLFVQRLS 452 (456)
Q Consensus 421 ~pg~~--fg------~---------------~~~~iRis~~~--~~e~i~~~l~~L~ 452 (456)
.+... .. . ....+.+.+.. ++++++..++.|+
T Consensus 307 ~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 307 RPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp BCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred cccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 88652 00 0 01245555433 7888888888764
No 316
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.48 E-value=1.7e-12 Score=131.87 Aligned_cols=255 Identities=13% Similarity=0.072 Sum_probs=154.4
Q ss_pred ceEEEccCHHHHHHHHHHHhcCC--------------------------CCCCCcEEEEeCCCCCChhhhhhhcCCeE--
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQ--------------------------DASEPISVVSAAPYYSSYPSITDCVKSRL-- 215 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~--------------------------gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~-- 215 (456)
++++++++++||++.+++..... |. ...+|+...-+|++....+.......
T Consensus 123 ~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~-~r~~ii~~~~syHG~t~~als~t~~~~~ 201 (464)
T TIGR00699 123 DQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGS-PDLSILSFKGAFHGRLFGSLSTTRSKPI 201 (464)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCC-cCCEEEEECCCcCCccHHHHHhcCCccc
Confidence 58999999999999999977321 10 01169999999999876655432110
Q ss_pred ------------eeecc------------------Ccccc----cc--CCCeEEEEcCCCCCCcccch---------HHh
Q 012785 216 ------------YKWAG------------------DAKRF----NK--DGPYIELVTSPNNPDGSVRQ---------SVV 250 (456)
Q Consensus 216 ------------~~~~~------------------d~~~l----~~--~~~~~i~v~~P~NPtG~~~~---------~l~ 250 (456)
++++. +.+.+ +. .+..+|++...+.-.|...+ ++|
T Consensus 202 ~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc 281 (464)
T TIGR00699 202 HKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDIT 281 (464)
T ss_pred cccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHH
Confidence 01110 01111 11 24567777555666677664 389
Q ss_pred hhcCcEEEeeecCCCCCCCCCC---CCC----CCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChH
Q 012785 251 NRSGGILVHDLAYYWPQYTSIT---YPA----DHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKD 323 (456)
Q Consensus 251 ~~~~~~iI~De~y~~~~~~~~~---~~~----~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~ 323 (456)
+++|+++|.||++.+.+.++-. ... ..+| .+|+|.+|-.| +++.. + ............|++.+++
T Consensus 282 ~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi--~t~gK~lg~gG----~~~~~-~-~~~~~~~~~~~~T~~gnp~ 353 (464)
T TIGR00699 282 KKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDM--VTFSKKFQTAG----YFFHD-P-AFRPNKPYRQFNTWMGDPS 353 (464)
T ss_pred HHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCE--EEehhhhccCC----ccccc-h-hccCCCCcccccCCCCCHH
Confidence 9999999999999875544321 111 1344 66899986234 44442 2 2211112234568899999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcC-CccccC--CCCcccccccccCCCCCceEEe
Q 012785 324 SQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSG-LFSVPE--LPSQFCTFLGRAFEPQPAFAWL 400 (456)
Q Consensus 324 ~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~-~~~~~~--~~g~~~~~~~~~~~~~~~f~~~ 400 (456)
+..++.+.|+.+.+. +.+++..+.-+..++.|.+..++++ .+...+ ..|. ++-+
T Consensus 354 ~~aaa~a~L~~l~~~---------~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Gl--------------m~gi 410 (464)
T TIGR00699 354 RALILREIIQEIKRK---------DLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGT--------------FIAW 410 (464)
T ss_pred HHHHHHHHHHHHHhc---------CHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEE--------------EEEE
Confidence 999999999876543 2333333333333333333333344 222222 3333 4555
Q ss_pred ecCc--cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEec--CChhHHHHHHHHHHhhh
Q 012785 401 KCEQ--EIEDCESFLKGNKILTRSGKHFGFSPKYVRISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 401 ~~~~--~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~l 455 (456)
.++. ....+.+.+.++||++.+. +.+.+||.-. .+++++++++++|.+.+
T Consensus 411 e~~~~~~~~~i~~~~~~~Gvl~~~~-----g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 411 DTPDEAKRDKLLKKARNNGVNIGGC-----GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred ecCCHHHHHHHHHHHHHCCcEEecC-----CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 6643 2456778888999999863 3578999854 49999999999998864
No 317
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.48 E-value=1.9e-11 Score=124.28 Aligned_cols=255 Identities=12% Similarity=0.081 Sum_probs=155.3
Q ss_pred ceEEEccCHHHHHHHHHHHhcCC--------CCC--CCcEEEEeCCCCCChhhhhhhcCC-e-E----ee--------e-
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQ--------DAS--EPISVVSAAPYYSSYPSITDCVKS-R-L----YK--------W- 218 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~--------gd~--~~~~Vlv~~P~y~~~~~~~~~~g~-~-~----~~--------~- 218 (456)
+.++++++++||++.+++....- |.. +..+|+...-+|++....+..... . . .+ .
T Consensus 104 ~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p 183 (431)
T TIGR03251 104 PHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNP 183 (431)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCC
Confidence 58999999999999999977421 210 011899999999998765544311 1 0 00 0
Q ss_pred ----ccC--------------cccc----c--cCCCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCC
Q 012785 219 ----AGD--------------AKRF----N--KDGPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYW 265 (456)
Q Consensus 219 ----~~d--------------~~~l----~--~~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~ 265 (456)
+.+ .+.+ + ..++.++++...+.-.|...+ ++|+++|+++|.||++.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG 263 (431)
T TIGR03251 184 KLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTG 263 (431)
T ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhc
Confidence 100 0111 1 124567777555666676643 389999999999999997
Q ss_pred CCCCCCC-----CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHH-----HHhhccCcCChHHHHHHHHHHHhh
Q 012785 266 PQYTSIT-----YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTK-----YIELNTIGVSKDSQLRAAKVLKVV 335 (456)
Q Consensus 266 ~~~~~~~-----~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~-----~~~~~~~~~s~~~q~~a~~~L~~~ 335 (456)
.+.++.. ..-..+++ +++|.+ +. .|++.. +++.+.+.. .....+++.++++..++.+.|+.+
T Consensus 264 ~GrtG~~~a~~~~gv~PDi~--~~gK~~--~~--~g~~~~--~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l 335 (431)
T TIGR03251 264 VGLTGTAWAYQQLGVQPDIV--AFGKKT--QV--CGIMAG--RRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEII 335 (431)
T ss_pred cCccchHHHHHhcCCCCCEE--EecccC--cc--ceEEec--chHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHH
Confidence 6555321 11133454 478875 21 255543 333222211 123467889999999999999876
Q ss_pred hCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcC-CccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHH
Q 012785 336 SDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSG-LFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESF 412 (456)
Q Consensus 336 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~ 412 (456)
.+. ..+++.++.-+..++.|.+..++.+ .+...+..|. ++.+.++. ....+.+.
T Consensus 336 ~~~---------~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~--------------~~~i~~~~~~~~~~~~~~ 392 (431)
T TIGR03251 336 EEE---------RLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGL--------------MCAFDLPSTADRDEVIRQ 392 (431)
T ss_pred Hhc---------CHHHHHHHHHHHHHHHHHHHHHhCccceecccccce--------------eEEEEeCCHHHHHHHHHH
Confidence 543 2344555555555555555444444 3333334443 35556643 24467778
Q ss_pred HHhCCEEeecCCCCCCCCCeEEEEec--CChhHHHHHHHHHHhh
Q 012785 413 LKGNKILTRSGKHFGFSPKYVRISML--DRDENYNLFVQRLSKI 454 (456)
Q Consensus 413 l~~~gI~v~pg~~fg~~~~~iRis~~--~~~e~i~~~l~~L~~~ 454 (456)
+.++||.+.|.. .+.+|++.. .+++++++++++|.++
T Consensus 393 l~~~Gvl~~~~g-----~~~lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 393 LYREGVLLLGCG-----ERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred HHhCCeEEecCC-----CCeEEEECCccCCHHHHHHHHHHHHhC
Confidence 889999998732 356887644 4899999999999864
No 318
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.47 E-value=2.2e-11 Score=121.14 Aligned_cols=281 Identities=10% Similarity=0.116 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEc-cCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCC-Chhhhhhhc--CCeEeee
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVG-TGSTQLFQAALYALSSQDASEPISVVSAAPYYS-SYPSITDCV--KSRLYKW 218 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t-~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~-~~~~~~~~~--g~~~~~~ 218 (456)
.+.|+.++++++. .++.+|+++ .++|.+++.++..+..+ + .+++..=.|. .+...+... +.++..+
T Consensus 44 ~~~r~~l~~l~~~-----~~~~~v~f~~gs~T~a~~~~~~~l~~~-~----~l~i~~G~~~~~~~~~a~~~~~~~~~~~~ 113 (361)
T TIGR01366 44 GRVREGLAELFSL-----PDGYEVILGNGGATAFWDAATFGLIEK-K----SLHLSFGEFSSKFAKAVKLAPWLGEPIIV 113 (361)
T ss_pred HHHHHHHHHHhCC-----CCCceEEEECCchhHHHHHHHHhcccc-c----ccEEecCHHHHHHHHHHHhhhccCCceEE
Confidence 5667777777753 123478876 55999999999998643 2 3344443343 233334431 1233333
Q ss_pred ccCc-cccc---cCCCeEEEEcCCCCCCcccch--HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCccccCCCC
Q 012785 219 AGDA-KRFN---KDGPYIELVTSPNNPDGSVRQ--SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKSTGHAG 292 (456)
Q Consensus 219 ~~d~-~~l~---~~~~~~i~v~~P~NPtG~~~~--~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~g~~G 292 (456)
+.+. +.++ ..++++|.++.-.|-||...+ ++++++|+++|+|-+.+-++. ++. ..+-+++++|--|.+|.+|
T Consensus 114 ~~~~~~~~~~~~~~~~~lV~~~h~et~tG~~~pi~~I~~~~g~~~iVDavqs~g~~-~id-v~~~D~~~~s~~K~lg~~~ 191 (361)
T TIGR01366 114 TADPGSAPEPQADPGVDVIAWAHNETSTGVAVPVRRPEGSDDALVVIDATSGAGGL-PVD-IAETDVYYFAPQKNFASDG 191 (361)
T ss_pred ecCCCCCCCCccCCCCCEEEEcccCCccceecccccccccCCCeEEEEcCccccCC-CCC-HHHCCEEEEEchhhcCCCC
Confidence 3221 1222 236789999999999999987 588889999999998874322 221 1125789999999999775
Q ss_pred ceEEEEEEeCHHHHHHHHHHHh--------------------hccCcCChHH-HHHHHHHHHhhhCCCCCCCCcchhHHH
Q 012785 293 TRIGWALVKDMEVAKKMTKYIE--------------------LNTIGVSKDS-QLRAAKVLKVVSDSCKPSGSEDECFFE 351 (456)
Q Consensus 293 ~RiG~l~~~~~~~~~~l~~~~~--------------------~~~~~~s~~~-q~~a~~~L~~~~~~~~~~~~~~~~~l~ 351 (456)
- ++.++++ +++.+++..... ..+.+.++.. -.++.++++.+.+. .-++
T Consensus 192 G-l~~~~~s-~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~---------gg~e 260 (361)
T TIGR01366 192 G-LWLAIMS-PAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGN---------GGLD 260 (361)
T ss_pred c-eEEEEEC-HHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHc---------cCHH
Confidence 3 5666665 777766552210 0123333333 22445555543321 1255
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCCCC
Q 012785 352 FTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFGFS 429 (456)
Q Consensus 352 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg~~ 429 (456)
...++.++..+.+++.|.+.+.+......... .......+.+++ +.+++...|+++||.+.++... ..
T Consensus 261 ~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~---------~s~~v~~v~~~~g~~~~~v~~~L~~~gI~i~~~~~~-l~ 330 (361)
T TIGR01366 261 WAVARTADSSSRLYSWAQERPYATPFVTDPGK---------RSQVVGTIDFVDDIDAATVAKILRANGIVDTEPYRK-LG 330 (361)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCCCChhh---------cccceEEEECCCccCHHHHHHHHHHCCCeeccCccc-cC
Confidence 66788888889999999988754332111100 000111222222 5677888889999999876422 23
Q ss_pred CCeEEEEecC--ChhHHHHHHHHHHhhhC
Q 012785 430 PKYVRISMLD--RDENYNLFVQRLSKILS 456 (456)
Q Consensus 430 ~~~iRis~~~--~~e~i~~~l~~L~~~l~ 456 (456)
.+.+|||+.. +.++++.+++.|+++++
T Consensus 331 ~~~vRis~~~~~t~~di~~l~~al~~~~~ 359 (361)
T TIGR01366 331 RNQLRVAMFPAIDPDDVEALTECVDWVVE 359 (361)
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHHHHh
Confidence 5789999875 89999999999998763
No 319
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.43 E-value=8.7e-11 Score=118.56 Aligned_cols=278 Identities=15% Similarity=0.102 Sum_probs=162.6
Q ss_pred HHHHHHHHHHH-HHhcCccCCCceEEEccCHHHHHHHHHHHhcCC-------------------------------CCCC
Q 012785 143 PEFAKEVVRLH-KVVGNAITENHHIVVGTGSTQLFQAALYALSSQ-------------------------------DASE 190 (456)
Q Consensus 143 ~~lr~aia~~~-~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~-------------------------------gd~~ 190 (456)
.+++....+.. +.+|... -+|-.-+|+ +|...++.+|++| ||
T Consensus 94 d~ie~l~~~ra~~lf~a~~---anvqp~Sg~-~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd-- 167 (493)
T PRK13580 94 DTVEWEAAEHAKELFGAEH---AYVQPHSGA-DANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQ-- 167 (493)
T ss_pred HHHHHHHHHHHHHHhCCCc---ccccCCCcH-HHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCC--
Confidence 44444444444 2344332 245445554 7777888888876 67
Q ss_pred CcEEEEeCCCCCChhhhh---hhcC--CeEeeeccC-------cccccc---CCCeEEEEcCCCCCCcccch-----HHh
Q 012785 191 PISVVSAAPYYSSYPSIT---DCVK--SRLYKWAGD-------AKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVV 250 (456)
Q Consensus 191 ~~~Vlv~~P~y~~~~~~~---~~~g--~~~~~~~~d-------~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~ 250 (456)
+|+..++...++.... ...| .+...+++| .+.++. ..++.++++..+|=.+ ..+ ++|
T Consensus 168 --~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~-~~dl~~i~eia 244 (493)
T PRK13580 168 --RLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPR-RVNFAKLREIA 244 (493)
T ss_pred --EEEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCC-CcCHHHHHHHH
Confidence 8988877665543221 1111 233333333 333332 2334444545544333 433 489
Q ss_pred hhcCcEEEeeecCCCCCCCC--CC----CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHH
Q 012785 251 NRSGGILVHDLAYYWPQYTS--IT----YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDS 324 (456)
Q Consensus 251 ~~~~~~iI~De~y~~~~~~~--~~----~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~ 324 (456)
+++|+++++|+++.-..... .. ...+-+|+++|++|++ .|-+.|+++++ +++++.+.........+..+..
T Consensus 245 ~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL--~GP~GG~I~~~-~~l~~~L~~a~P~i~gg~l~p~ 321 (493)
T PRK13580 245 DEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTL--RGPRGGLVLAK-KEYADAVDKGCPLVLGGPLPHV 321 (493)
T ss_pred HHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhc--cCCCeEEEEec-HHHHHHHhhCCCcccCCCccHH
Confidence 99999999999997321110 00 1124579999999988 22335999996 8888888554433333333333
Q ss_pred HHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc
Q 012785 325 QLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ 404 (456)
Q Consensus 325 q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~ 404 (456)
..+++..+..+... + .+..++++.++.+.|.+.|.+.+ +.+... + +.+..+++.+.+
T Consensus 322 iAA~avAl~e~~~~---------e-f~~y~~~l~~Na~~La~~L~~~G-~~vv~g-g-----------TdshIV~V~lg~ 378 (493)
T PRK13580 322 MAAKAVALAEARTP---------E-FQKYAQQVVDNARALAEGFLKRG-ARLVTG-G-----------TDNHLVLIDVTS 378 (493)
T ss_pred HHHHHHHHHHHhCc---------c-HHHHHHHHHHHHHHHHHHHHhcC-CCccCC-C-----------CCCCEEEEEeCC
Confidence 33333334432211 1 24568888899999999998876 333211 1 111257777754
Q ss_pred c---HHHHHHHHHhCCEEeecCCCCC--CC---CCeEEEEecC------ChhHHHHHHHHHHhhh
Q 012785 405 E---IEDCESFLKGNKILTRSGKHFG--FS---PKYVRISMLD------RDENYNLFVQRLSKIL 455 (456)
Q Consensus 405 ~---~~~~~~~l~~~gI~v~pg~~fg--~~---~~~iRis~~~------~~e~i~~~l~~L~~~l 455 (456)
. ...+.+.|.+.||.+.+-..-. .+ +..|||++.. ++++++++++.|.+++
T Consensus 379 ~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l 443 (493)
T PRK13580 379 FGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVL 443 (493)
T ss_pred HHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHH
Confidence 2 3467779999999997533211 12 5679999753 5789999999998765
No 320
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.42 E-value=6e-11 Score=118.05 Aligned_cols=276 Identities=13% Similarity=0.076 Sum_probs=176.0
Q ss_pred ccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhh-hh
Q 012785 131 FSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSI-TD 209 (456)
Q Consensus 131 y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~-~~ 209 (456)
|..+.. ..+|+++++++++. ++++.+++++.|++++..+.+++|| .| +.++|...... ..
T Consensus 67 yag~~s-----~~~lE~~va~~~G~--------~~av~v~sGT~Al~ll~~l~l~pGD----eV--psn~~f~Tt~ahIe 127 (450)
T TIGR02618 67 YAGSRN-----FYHLERTVRELYGF--------KYVVPTHQGRGAENLLSQIAIKPGD----YV--PGNMYFTTTRYHQE 127 (450)
T ss_pred hcCCCc-----HHHHHHHHHHHHCC--------CeEEEcCCHHHHHHHHHHhCCCCcC----EE--CCceeHHHHHHHHH
Confidence 655554 48999999999974 5899999999999988877789998 76 66777554444 67
Q ss_pred hcCCeEeeecc----------------Ccccccc----C---CCeEEEEcCCCCC-Ccccch--------HHhhhcCcEE
Q 012785 210 CVKSRLYKWAG----------------DAKRFNK----D---GPYIELVTSPNNP-DGSVRQ--------SVVNRSGGIL 257 (456)
Q Consensus 210 ~~g~~~~~~~~----------------d~~~l~~----~---~~~~i~v~~P~NP-tG~~~~--------~l~~~~~~~i 257 (456)
..|+.++.+.. |.+.++. . ++.++.+.+++|- .|..++ ++|+++|+.+
T Consensus 128 ~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~v 207 (450)
T TIGR02618 128 KNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKV 207 (450)
T ss_pred hCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEE
Confidence 78887766532 3444332 1 2346777788885 478755 3899999999
Q ss_pred EeeecCCC----------CCCCCCCC-------CCCCcEEEecCccccCCC-CceEEEEEEeCHHHHHHHHHHHhhc---
Q 012785 258 VHDLAYYW----------PQYTSITY-------PADHDLMLFTVSKSTGHA-GTRIGWALVKDMEVAKKMTKYIELN--- 316 (456)
Q Consensus 258 I~De~y~~----------~~~~~~~~-------~~~~~i~i~S~SK~~g~~-G~RiG~l~~~~~~~~~~l~~~~~~~--- 316 (456)
|+|-+... +++...+- ...-+....|..|.++.+ | |+++..|++++++++......
T Consensus 208 i~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G---G~l~~~d~~l~~k~r~~~~~~eG~ 284 (450)
T TIGR02618 208 FYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG---GFLCMNDDEMFQSAKELVVVFEGM 284 (450)
T ss_pred EEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc---eEEEeCCHHHHHHHHHHhhhcCCc
Confidence 99987653 12222110 112356888999988766 4 677768899999998885432
Q ss_pred -cCcC-ChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCC
Q 012785 317 -TIGV-SKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQ 394 (456)
Q Consensus 317 -~~~~-s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~ 394 (456)
+.|. +.-...+++..|....+ ..+++. -....++|.+.|.+.+ +.+..|.|+.
T Consensus 285 ~tyGgla~r~~~ala~gL~e~~~---------~~y~~~----r~~~a~~La~~L~~~G-vpv~~p~ggh----------- 339 (450)
T TIGR02618 285 PSYGGLAGRDMEAMAIGIREAVD---------YEYIEH----RVKQVRYLGDKLKAAG-VPIVEPVGGH----------- 339 (450)
T ss_pred cccCchhhhhHHHHHHHHHHhhh---------HHHHHH----HHHHHHHHHHHHHHCC-CcccCCCCcc-----------
Confidence 2222 22233333334442111 122221 2223567778887774 6666677766
Q ss_pred CceEEeecC-------c----cHHHHHHHHHhCCEEeecCCCC--CC----------CCCeEEEEecC---ChhHHHHHH
Q 012785 395 PAFAWLKCE-------Q----EIEDCESFLKGNKILTRSGKHF--GF----------SPKYVRISMLD---RDENYNLFV 448 (456)
Q Consensus 395 ~~f~~~~~~-------~----~~~~~~~~l~~~gI~v~pg~~f--g~----------~~~~iRis~~~---~~e~i~~~l 448 (456)
-++++.. . ......++..+.||-..--..+ |. .-..+|+.+.+ +.+.++...
T Consensus 340 --~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~ 417 (450)
T TIGR02618 340 --AVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVA 417 (450)
T ss_pred --eEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHH
Confidence 3555432 1 2345667778899975442222 21 12579999875 888999999
Q ss_pred HHHHhhh
Q 012785 449 QRLSKIL 455 (456)
Q Consensus 449 ~~L~~~l 455 (456)
++|..+.
T Consensus 418 ~~~~~~~ 424 (450)
T TIGR02618 418 DGIIKLY 424 (450)
T ss_pred HHHHHHH
Confidence 9988764
No 321
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.41 E-value=8.4e-11 Score=116.76 Aligned_cols=260 Identities=13% Similarity=0.026 Sum_probs=170.5
Q ss_pred ceEE-EccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCC--hhhhhhhcCCeEeeeccC-------cccc----ccCC
Q 012785 164 HHIV-VGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSS--YPSITDCVKSRLYKWAGD-------AKRF----NKDG 229 (456)
Q Consensus 164 ~~I~-~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~--~~~~~~~~g~~~~~~~~d-------~~~l----~~~~ 229 (456)
.+|+ ++.+++.+++.++..+..+|+ ++++..-+..+ +...++..|.. ..+..+ ...+ ...+
T Consensus 67 ~~v~~~~gsgt~~~Ea~~~nl~~~g~----~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~ 141 (360)
T PRK05355 67 YKVLFLQGGASLQFAMVPMNLLGGGK----KADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDD 141 (360)
T ss_pred cEEEEEcCCchHHHHHHHHhcCCCCC----eEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCCCC
Confidence 3455 557777889999999999988 77766554443 44567777865 222111 1111 1125
Q ss_pred CeEEEEcCCCCCCcccchHHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHH
Q 012785 230 PYIELVTSPNNPDGSVRQSVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKM 309 (456)
Q Consensus 230 ~~~i~v~~P~NPtG~~~~~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l 309 (456)
+++|.++...+.||...+++.+-+|+++|+|-+..-.+..--.... .+++.|--|.+|.+| +|.++++ +++.+++
T Consensus 142 ~~~V~~th~eTstGv~~~~i~~i~g~l~vVDavss~g~~~idv~~~--d~~~~ssqK~lgP~G--lg~l~~s-~~~l~~~ 216 (360)
T PRK05355 142 AAYVHYTSNETIDGTEFHELPDTGDVPLVADMSSDILSRPIDVSKF--GLIYAGAQKNIGPAG--LTIVIVR-EDLLGRA 216 (360)
T ss_pred CCEEEEccCCCcceEecCcccccCCCcEEEEcCccccCccCCHHHc--cEEEEeccccccCCc--eEEEEEC-HHHHhhc
Confidence 7889888888999999854433389999999988743222111222 399999999999888 7999997 7777665
Q ss_pred HHH-----------H-hhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q 012785 310 TKY-----------I-ELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVP 377 (456)
Q Consensus 310 ~~~-----------~-~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~ 377 (456)
... . ......++.....++.++|+.+.+. .-++...++.++..+.+++.|++++.+...
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~---------gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~ 287 (360)
T PRK05355 217 LPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQ---------GGVAAMEKRNQEKAALLYDAIDSSDFYRNP 287 (360)
T ss_pred ccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHc---------cCHHHHHHHHHHHHHHHHHHHHhCCCcccC
Confidence 441 1 1123445566666677777754321 036788888999999999999998743221
Q ss_pred CCCCcccccccccCCCCCceEEeecCcc--HHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC--ChhHHHHHHHHHHh
Q 012785 378 ELPSQFCTFLGRAFEPQPAFAWLKCEQE--IEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD--RDENYNLFVQRLSK 453 (456)
Q Consensus 378 ~~~g~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~ 453 (456)
.+.. . ..+.-+-+.+++. .+.+...+.++|+.+.+|.. ..+.+|+|+.. +.|+++.+++.|++
T Consensus 288 ~~~~-~---------rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~---~~g~vRiS~~~~nt~eei~~l~~~l~~ 354 (360)
T PRK05355 288 VAPE-D---------RSRMNVPFTLADEELDKKFLAEAKAAGLVGLKGHR---SVGGMRASIYNAMPLEGVQALVDFMKE 354 (360)
T ss_pred CChh-h---------cCCcEEEEEcCChHHHHHHHHHHHHCCCcccCCCC---ccCcEEEECCCCCCHHHHHHHHHHHHH
Confidence 1110 0 0111234445442 24565677789999877653 24789999865 79999999999998
Q ss_pred hh
Q 012785 454 IL 455 (456)
Q Consensus 454 ~l 455 (456)
++
T Consensus 355 ~~ 356 (360)
T PRK05355 355 FE 356 (360)
T ss_pred HH
Confidence 76
No 322
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.39 E-value=8.3e-12 Score=119.38 Aligned_cols=198 Identities=16% Similarity=0.096 Sum_probs=140.9
Q ss_pred CCceEEEccCHHHHHHHHHHHhcCCCCC----CCcEEEEeCCCCCChhhhhhhc-CCeEeeecc-------------Ccc
Q 012785 162 ENHHIVVGTGSTQLFQAALYALSSQDAS----EPISVVSAAPYYSSYPSITDCV-KSRLYKWAG-------------DAK 223 (456)
Q Consensus 162 ~~~~I~~t~G~~~al~~~~~~l~~~gd~----~~~~Vlv~~P~y~~~~~~~~~~-g~~~~~~~~-------------d~~ 223 (456)
..+.|.+++.+++|++.+++...+.... ...+|+...-+|++....+... +..-+..+. |..
T Consensus 115 ~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t 194 (433)
T KOG1401|consen 115 SAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDST 194 (433)
T ss_pred CccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHH
Confidence 3579999999999999999887543210 0014888999999877665552 222222111 222
Q ss_pred cccc----C--CCeEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCCCC-----CCCcEEEec
Q 012785 224 RFNK----D--GPYIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSITYP-----ADHDLMLFT 283 (456)
Q Consensus 224 ~l~~----~--~~~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~~~-----~~~~i~i~S 283 (456)
.+++ + ...++++..-+.-.|..+. .+|+++++++|.||++.+..+.+.... ...+ |.+
T Consensus 195 ~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PD--I~t 272 (433)
T KOG1401|consen 195 ALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPD--ITT 272 (433)
T ss_pred HHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCc--cee
Confidence 2221 2 3567777555766666654 279999999999999997554442111 1112 567
Q ss_pred CccccCCCCceEEEEEEeCHHHHHHHHHHHh---hccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHH
Q 012785 284 VSKSTGHAGTRIGWALVKDMEVAKKMTKYIE---LNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTR 360 (456)
Q Consensus 284 ~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~---~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 360 (456)
+.|.++ .|+++|..++. +++++.+..... ..+++.++++..++...|+.+.+ .++++++...-+..
T Consensus 273 ~aK~L~-gGlPigA~~v~-~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~---------~e~~k~vs~~~k~L 341 (433)
T KOG1401|consen 273 VAKPLG-GGLPIGATGVR-DKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKD---------PETLKNVSKIGKEL 341 (433)
T ss_pred ehhhcc-CCceeEEEeeh-HHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcC---------HHHHHHHHHHHHHH
Confidence 899999 99999999996 899998876554 67899999999999999998765 47888888888888
Q ss_pred HHHHHHHHHhcC
Q 012785 361 WKQLRMAVQKSG 372 (456)
Q Consensus 361 ~~~l~~~L~~~~ 372 (456)
|+.+.+.+.+.+
T Consensus 342 ~~~l~e~~~~~~ 353 (433)
T KOG1401|consen 342 RKLLDEYLKKTP 353 (433)
T ss_pred HHHHHHHhccCC
Confidence 888888887754
No 323
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.37 E-value=2.2e-10 Score=108.55 Aligned_cols=284 Identities=14% Similarity=0.157 Sum_probs=183.7
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhh----hhhcCCeEee
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSI----TDCVKSRLYK 217 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~----~~~~g~~~~~ 217 (456)
...|++.||.+-+- ---+.+++++.|+..++..+..+|| +|+...--|.+...+ ++.+|.++..
T Consensus 64 ~~vlE~RiAaLEGG--------~aa~a~aSG~AA~~~ai~~la~aGD----~iVss~~LYGGT~~lf~~tl~~~Gi~v~f 131 (426)
T COG2873 64 TDVLEERIAALEGG--------VAALAVASGQAAITYAILNLAGAGD----NIVSSSKLYGGTYNLFSHTLKRLGIEVRF 131 (426)
T ss_pred HHHHHHHHHHhhcc--------hhhhhhccchHHHHHHHHHhccCCC----eeEeeccccCchHHHHHHHHHhcCcEEEE
Confidence 47899999988752 1345677778999999999999999 999998877775544 4667888877
Q ss_pred eccC-cccccc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCcccc
Q 012785 218 WAGD-AKRFNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKST 288 (456)
Q Consensus 218 ~~~d-~~~l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~ 288 (456)
++.| .+.+++ +++|+|++.+-.||.+.+.+ ++|+++++++|+|..+..| +.--+...+-+|+++|+||.+
T Consensus 132 vd~~d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atp-yl~rP~~hGADIVvHS~TK~i 210 (426)
T COG2873 132 VDPDDPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATP-YLCRPIEHGADIVVHSATKYI 210 (426)
T ss_pred eCCCCHHHHHHHhCcccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcc-eecchhhcCCCEEEEeecccc
Confidence 7654 456654 47899999999999999987 4899999999999988865 333334566789999999999
Q ss_pred CCCCceEEEEEEeCH-----------------------HHHH---------HHH-HHHhhccCcCChHHHHHHHHHHHhh
Q 012785 289 GHAGTRIGWALVKDM-----------------------EVAK---------KMT-KYIELNTIGVSKDSQLRAAKVLKVV 335 (456)
Q Consensus 289 g~~G~RiG~l~~~~~-----------------------~~~~---------~l~-~~~~~~~~~~s~~~q~~a~~~L~~~ 335 (456)
|-.|--||-+++... .+.+ +.+ ...+-.....+|+........|+
T Consensus 211 gGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlE-- 288 (426)
T COG2873 211 GGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLE-- 288 (426)
T ss_pred cCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchh--
Confidence 889999998877410 0111 111 11122344556666555555554
Q ss_pred hCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccc----cccccC-CCCCceEEeecCcc---HH
Q 012785 336 SDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCT----FLGRAF-EPQPAFAWLKCEQE---IE 407 (456)
Q Consensus 336 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~----~~~~~~-~~~~~f~~~~~~~~---~~ 407 (456)
.+.-..++.-++...+.+.|+.++.+.+...+|.-.+ .-.+.+ ...+..+-+.+++. .+
T Consensus 289 -------------TL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~ 355 (426)
T COG2873 289 -------------TLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGK 355 (426)
T ss_pred -------------hhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecChHHHHH
Confidence 3334455666788889999999987766555442211 111111 12233455566542 22
Q ss_pred HHHHHHH----------hCCEEeecCCCC------------CCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 408 DCESFLK----------GNKILTRSGKHF------------GFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 408 ~~~~~l~----------~~gI~v~pg~~f------------g~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
.+.+.|+ .+-+.+-|.+.- |..++.||+|++. |+++.++.-|++.+
T Consensus 356 ~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI--Ed~~DiiaDl~qAl 423 (426)
T COG2873 356 KFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI--EDIDDIIADLEQAL 423 (426)
T ss_pred HHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc--CCHHHHHHHHHHHH
Confidence 2222222 123455565432 2257899999854 45555666666554
No 324
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.37 E-value=8.7e-11 Score=107.76 Aligned_cols=301 Identities=15% Similarity=0.158 Sum_probs=189.7
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHH
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGST 173 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~ 173 (456)
...+||-+..-+.|+.+... +.. .+.... .-|+...- ...|++.+|+..+. +.-+++++|++
T Consensus 21 ~~~vDLRSDTvT~PTdeMr~-am~-eA~vgD----dVyGeD~t-----t~rLE~~vA~l~GK-------EAgLFv~SGTm 82 (384)
T KOG1368|consen 21 HRSVDLRSDTVTVPTDEMRR-AMA-EASVGD----DVYGEDPT-----TNRLEQRVAELFGK-------EAGLFVPSGTM 82 (384)
T ss_pred eeccccccccccCChHHHHH-HHh-hcccCc----ccccCCcc-----HHHHHHHHHHHhCc-------cceeeeccccc
Confidence 35678888776666654332 111 112211 13544433 37999999999985 44677777765
Q ss_pred HHHHHHHHHhc-CCCCCCCcEEEEeCCCCCChhh---hhhhcCCeEeeecc------CccccccC-----------CCeE
Q 012785 174 QLFQAALYALS-SQDASEPISVVSAAPYYSSYPS---ITDCVKSRLYKWAG------DAKRFNKD-----------GPYI 232 (456)
Q Consensus 174 ~al~~~~~~l~-~~gd~~~~~Vlv~~P~y~~~~~---~~~~~g~~~~~~~~------d~~~l~~~-----------~~~~ 232 (456)
.- .+++..-+ .+|. +|++.+-++-...+ +....|+.+.++.. |.++++.. .+++
T Consensus 83 gN-llaIm~Hc~~rg~----eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~L 157 (384)
T KOG1368|consen 83 GN-LLAIMVHCHQRGS----EIIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKL 157 (384)
T ss_pred cc-HHHHHHHhcCCCc----eEEeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceE
Confidence 54 44554544 4777 89998876543222 23344666555442 33444321 3689
Q ss_pred EEEcCCCCCCc-ccch--------HHhhhcCcEEEeeecCCCC----CCCCC---CCCCCCcEEEecCccccCCCCceEE
Q 012785 233 ELVTSPNNPDG-SVRQ--------SVVNRSGGILVHDLAYYWP----QYTSI---TYPADHDLMLFTVSKSTGHAGTRIG 296 (456)
Q Consensus 233 i~v~~P~NPtG-~~~~--------~l~~~~~~~iI~De~y~~~----~~~~~---~~~~~~~i~i~S~SK~~g~~G~RiG 296 (456)
|.+.|-||-+| .++| ++|+++|+.+-.|-+-.|. .-.|+ ....|.+-++ |||.+|.| +|
T Consensus 158 IclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiC--LSKglgAP---VG 232 (384)
T KOG1368|consen 158 ICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSIC--LSKGLGAP---VG 232 (384)
T ss_pred EEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhh--hhccCCCC---cc
Confidence 99999988776 7877 3899999999999876552 11222 2334444333 89988865 89
Q ss_pred EEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q 012785 297 WALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSV 376 (456)
Q Consensus 297 ~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~ 376 (456)
-+++.+++++++.+..+.....|.-.....+++++.. +.+. +. ..+.-.++.+.+.+.+...+.+.+
T Consensus 233 SViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLva-l~~~-----------~~-~L~~dHk~A~~lAe~~~~~~~i~v 299 (384)
T KOG1368|consen 233 SVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVA-LDEN-----------VP-LLRADHKRAKELAEYINTPEEIRV 299 (384)
T ss_pred cEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH-hhcc-----------hH-HHHHHHHHHHHHHHHhccccceee
Confidence 8877779999998888776555555444444444443 2222 22 233334556667777776665555
Q ss_pred cCCCCcccccccccCCCCCceEEeecCc---cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC--ChhHHHHHHHHH
Q 012785 377 PELPSQFCTFLGRAFEPQPAFAWLKCEQ---EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD--RDENYNLFVQRL 451 (456)
Q Consensus 377 ~~~~g~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L 451 (456)
..| .-++|++.+.+.. +.+.+...++++||.+.+|. ...+|+.|-. ++++++..+..+
T Consensus 300 ~v~------------a~etNiv~~~l~q~~~~~~~l~~~~~k~gi~lm~~~-----s~r~Rivlh~Qvt~~~ve~~~~~~ 362 (384)
T KOG1368|consen 300 EVP------------AVETNIVNMVLCQARLTAEELCKFLEKNGILLMGGA-----SRRIRIVLHHQVTDEDVEYVKSVL 362 (384)
T ss_pred ecc------------hhhcceeeeecccccCCHHHHHHHHHHCCeEEeecc-----ccceEEEEEEecCHHHHHHHHHHH
Confidence 433 1344566665532 67888899999999999865 3447999864 899999999888
Q ss_pred H
Q 012785 452 S 452 (456)
Q Consensus 452 ~ 452 (456)
.
T Consensus 363 ~ 363 (384)
T KOG1368|consen 363 S 363 (384)
T ss_pred H
Confidence 4
No 325
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.37 E-value=2.4e-10 Score=114.16 Aligned_cols=277 Identities=11% Similarity=0.061 Sum_probs=174.5
Q ss_pred ccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhh-hh
Q 012785 131 FSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSI-TD 209 (456)
Q Consensus 131 y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~-~~ 209 (456)
|..+.. ..+|+++++++++. ++++.++.++.|+++++...+++|| .| +..+|...... ..
T Consensus 74 Yagd~s-----~~~LE~~vAe~lG~--------e~aV~v~sGTaAl~ll~~l~v~pGd----~V--p~n~~f~Tt~ahI~ 134 (460)
T PRK13237 74 YAGSRN-----FYHLEETVQEYYGF--------KHVVPTHQGRGAENLLSRIAIKPGQ----YV--PGNMYFTTTRYHQE 134 (460)
T ss_pred hcCCCc-----HHHHHHHHHHHHCC--------CeEEEeCCHHHHHHHHHHhCCCCcC----EE--CCccchHhhHHHHH
Confidence 665555 48999999999974 4799999999999988777788998 65 44334333333 56
Q ss_pred hcCCeEeee----------------ccCccccccC-------CCeEEEEcCCCCCC-cccch--------HHhhhcCcEE
Q 012785 210 CVKSRLYKW----------------AGDAKRFNKD-------GPYIELVTSPNNPD-GSVRQ--------SVVNRSGGIL 257 (456)
Q Consensus 210 ~~g~~~~~~----------------~~d~~~l~~~-------~~~~i~v~~P~NPt-G~~~~--------~l~~~~~~~i 257 (456)
..|+..+.+ .+|.+.++.. ++.++.+.+++|-. |...+ ++|+++|+.+
T Consensus 135 ~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~V 214 (460)
T PRK13237 135 LNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKV 214 (460)
T ss_pred hCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEE
Confidence 667765544 2344444321 23356667888888 55543 3899999999
Q ss_pred EeeecCCC----------CCCCCCCC-------CCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhh----c
Q 012785 258 VHDLAYYW----------PQYTSITY-------PADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIEL----N 316 (456)
Q Consensus 258 I~De~y~~----------~~~~~~~~-------~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~----~ 316 (456)
|+|-+... ..+....- ..--++...|++|.++.+- -|++++.|++++++++...-. .
T Consensus 215 i~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~--GG~i~t~D~eL~~~~r~~~~~~eG~~ 292 (460)
T PRK13237 215 FFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI--GGFLAMNDEELFDEAKELVVVYEGMP 292 (460)
T ss_pred EEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC--ceEEEECCHHHHHHHHHhccccCCCc
Confidence 99987752 12222110 1234788899999987551 399999999999999887422 1
Q ss_pred cC-cCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCC
Q 012785 317 TI-GVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQP 395 (456)
Q Consensus 317 ~~-~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~ 395 (456)
++ +.+.-...+++..|.... ..++++... +..++|.+.|.+.+ +.+..|.||.+
T Consensus 293 tygg~~grd~~alAvgl~E~~---------~~~y~~~ri----~~~~~l~~~L~~~G-vpv~~p~ggH~----------- 347 (460)
T PRK13237 293 SYGGMAGRDMEAMAIGIEESV---------QYEYIEHRV----GQVRYLGEKLLAAG-VPIVEPVGGHA----------- 347 (460)
T ss_pred CCCChhhhHHHHHHhHHHhhc---------hHHHHHHHH----HHHHHHHHHHHHCC-CceecCCCceE-----------
Confidence 22 332323333333343111 123333333 24466777787765 66777888874
Q ss_pred ceEEeec-------Cc----cHHHHHHHHHhCCEEeecCCCC--CC----------CCCeEEEEecC---ChhHHHHHHH
Q 012785 396 AFAWLKC-------EQ----EIEDCESFLKGNKILTRSGKHF--GF----------SPKYVRISMLD---RDENYNLFVQ 449 (456)
Q Consensus 396 ~f~~~~~-------~~----~~~~~~~~l~~~gI~v~pg~~f--g~----------~~~~iRis~~~---~~e~i~~~l~ 449 (456)
++++. |. ....+.++..+.||-..--..+ |. .-..+|+.+.+ +.+.++...+
T Consensus 348 --v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~ 425 (460)
T PRK13237 348 --VFLDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVAD 425 (460)
T ss_pred --EEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHH
Confidence 44432 21 2345667778889876432222 21 12579999875 8889999999
Q ss_pred HHHhhh
Q 012785 450 RLSKIL 455 (456)
Q Consensus 450 ~L~~~l 455 (456)
+|..+.
T Consensus 426 ~~~~~~ 431 (460)
T PRK13237 426 SVIKLY 431 (460)
T ss_pred HHHHHH
Confidence 888764
No 326
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.37 E-value=1.5e-11 Score=125.01 Aligned_cols=255 Identities=12% Similarity=0.089 Sum_probs=142.4
Q ss_pred ceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEe-CCCCCChhhh-----hhhcCC------eEeeec-cCcccccc--
Q 012785 164 HHIVVGTGSTQLFQAALYALSS-QDASEPISVVSA-APYYSSYPSI-----TDCVKS------RLYKWA-GDAKRFNK-- 227 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~-~P~y~~~~~~-----~~~~g~------~~~~~~-~d~~~l~~-- 227 (456)
+.+++++++++|++.+++.... .|.. +|+.. .-+|+.+... ....|. ....++ .|.+.++.
T Consensus 105 ~~v~f~~sGseA~e~AlklAr~~tgr~---~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l 181 (431)
T PRK06209 105 DMVKFCKNGSDATSAAVRLARAYTGRD---LVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRYNDIASLEALF 181 (431)
T ss_pred ceEEEecCHHHHHHHHHHHHHHHhCCC---eEEEeccCccccccccccccCCCCCCCChhHhccccccCCCCHHHHHHHH
Confidence 5899999999999999986643 2331 56554 2233221100 000111 011222 14444432
Q ss_pred ----CCCeEEEEcCCC--CCCcccch---HHhhhcCcEEEeeecCCCCCCCCC--CC--CCCCcEEEecCccccCCCCce
Q 012785 228 ----DGPYIELVTSPN--NPDGSVRQ---SVVNRSGGILVHDLAYYWPQYTSI--TY--PADHDLMLFTVSKSTGHAGTR 294 (456)
Q Consensus 228 ----~~~~~i~v~~P~--NPtG~~~~---~l~~~~~~~iI~De~y~~~~~~~~--~~--~~~~~i~i~S~SK~~g~~G~R 294 (456)
.+..+|++...+ .|.-..+. ++|+++|+++|.||++.+...... .. .-..+ +.+++|.+| .|+.
T Consensus 182 ~~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv~PD--i~t~gK~lg-gG~p 258 (431)
T PRK06209 182 EDHPGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIVPD--LSCFGKALG-NGFA 258 (431)
T ss_pred HhCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCCCcc--eeeehhhhc-CCcc
Confidence 234555553322 12211122 489999999999999876433211 10 11223 477999999 7899
Q ss_pred EEEEEEeCHHHHHH--HHH------HHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 012785 295 IGWALVKDMEVAKK--MTK------YIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRM 366 (456)
Q Consensus 295 iG~l~~~~~~~~~~--l~~------~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 366 (456)
+|+++++ +++++. +.. .....+++.+++...++.+.|+.+.+. +.+++.++.-+..++.+.+
T Consensus 259 ~~av~~~-~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~---------~~~~~~~~~g~~l~~~L~~ 328 (431)
T PRK06209 259 VSALAGK-REYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDE---------DVIERLHEQGAKLAAGVNE 328 (431)
T ss_pred cEEEEEH-HHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhcc---------CHHHHHHHHHHHHHHHHHH
Confidence 9999996 888775 311 113357778889999999998876543 2344444444444444444
Q ss_pred HHHhcCCccccCCCCcccccccccCCCCCceEEeecC---c-c---HHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC
Q 012785 367 AVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE---Q-E---IEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD 439 (456)
Q Consensus 367 ~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~---~-~---~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~ 439 (456)
...+++.....+..|.+.. ..++... . . ...+.+.+.++||.+.| ++|+...
T Consensus 329 ~~~~~~~~~~vr~~G~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p~----------l~is~~h 387 (431)
T PRK06209 329 AAAEHGLQDHVRVSGRPCC-----------LTYSTLDGNGQPSQAFRTLFLQETIRRGVLMPS----------LVVSYAH 387 (431)
T ss_pred HHHhCCCCeEEEeecceEE-----------EEEecCCcccCCcHHHHHHHHHHHHHCCccccc----------ccccccC
Confidence 3333442211222233211 1222111 1 1 22456677889998632 4677555
Q ss_pred ChhHHHHHHHHHHhhh
Q 012785 440 RDENYNLFVQRLSKIL 455 (456)
Q Consensus 440 ~~e~i~~~l~~L~~~l 455 (456)
+++++++++++|.+++
T Consensus 388 t~~dId~~l~~l~~~l 403 (431)
T PRK06209 388 GDADIERTIDAVHGAL 403 (431)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999998876
No 327
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.36 E-value=8.5e-11 Score=126.45 Aligned_cols=195 Identities=12% Similarity=0.007 Sum_probs=131.2
Q ss_pred CCeEEEEcCC-CCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCCCCC-----CCcEEEecCccccCCCC-
Q 012785 229 GPYIELVTSP-NNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSITYPA-----DHDLMLFTVSKSTGHAG- 292 (456)
Q Consensus 229 ~~~~i~v~~P-~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~~~~-----~~~i~i~S~SK~~g~~G- 292 (456)
+..++++... ++-.|.+++ ++|+++|+++|.||++.+.+.++..... ..+| -+++|.++ .|
T Consensus 584 ~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDI--i~~gKgLt-gG~ 660 (817)
T PLN02974 584 HIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDI--ACYAKLLT-GGL 660 (817)
T ss_pred CEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCE--Eeeccccc-CCC
Confidence 3456666432 666677765 3899999999999999987666543221 2334 45899998 89
Q ss_pred ceEEEEEEeCHHHHHHHHH------HHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHH-
Q 012785 293 TRIGWALVKDMEVAKKMTK------YIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLR- 365 (456)
Q Consensus 293 ~RiG~l~~~~~~~~~~l~~------~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~- 365 (456)
+.+|.++++ +++.+.+.. ..+..+++.++++..++.+.|+.+++. +..+...+..++.++.+.
T Consensus 661 ~Plaa~l~~-~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~---------~~~~~l~~~~~~l~~~l~~ 730 (817)
T PLN02974 661 VPLAATLAT-EEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDP---------STNPNLIPPGSRLRELWDE 730 (817)
T ss_pred CccEEEEEc-HHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcc---------cHHHHHHHHHHHHHHHHHH
Confidence 699999997 999998852 234568999999999999999977653 223333333434333333
Q ss_pred ---HHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc----------cHHHHHHHHH-hCCEEeecCCCCCCCCC
Q 012785 366 ---MAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----------EIEDCESFLK-GNKILTRSGKHFGFSPK 431 (456)
Q Consensus 366 ---~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----------~~~~~~~~l~-~~gI~v~pg~~fg~~~~ 431 (456)
+.|++++.+.-.+..|.+ +-+.+.. ....+.+.+. ++||.++|. .+
T Consensus 731 ~l~~~l~~~p~V~~VRg~Gl~--------------~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~------Gn 790 (817)
T PLN02974 731 ELVRAISSLPNVERVVSLGTV--------------LALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL------GN 790 (817)
T ss_pred HHHHHHhhCCCeeEEEeeeeE--------------EEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec------CC
Confidence 344555544444445544 4444421 1235666777 999999982 36
Q ss_pred eEEEEe--cCChhHHHHHHHHHHhhhC
Q 012785 432 YVRISM--LDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 432 ~iRis~--~~~~e~i~~~l~~L~~~l~ 456 (456)
.||+.- ..++|++++++++|.+.|+
T Consensus 791 vi~l~pP~~i~~e~l~~~~~~l~~~~~ 817 (817)
T PLN02974 791 VVYLMCGPTTSPETCTRLLRKVYRRLS 817 (817)
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHhC
Confidence 788753 3489999999999998764
No 328
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.36 E-value=5.7e-11 Score=115.74 Aligned_cols=151 Identities=13% Similarity=0.128 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcC-CCCCCCcEEEEeCCCCCChhhhhhhc---CCeEeee
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSS-QDASEPISVVSAAPYYSSYPSITDCV---KSRLYKW 218 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P~y~~~~~~~~~~---g~~~~~~ 218 (456)
.+.|+.+|++++. ++++|+||+|+||+++++++.... .++...++|++..--|+.....++.+ |+++..+
T Consensus 88 E~aR~~VAklInA------d~~dIiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~l 161 (428)
T KOG1549|consen 88 EAAREQVAKLINA------DPSDIVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYL 161 (428)
T ss_pred HHHHHHHHHHhCC------CCCcEEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEe
Confidence 5788999999976 566799999999999999998743 33322237888888888777666554 7777766
Q ss_pred ccCcccc------cc---CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecC
Q 012785 219 AGDAKRF------NK---DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTV 284 (456)
Q Consensus 219 ~~d~~~l------~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~ 284 (456)
+.+.+++ ++ .+++++.+..-+|-+|++++ ++|+++++.++.|.++.-.+..--...-+-+++..|.
T Consensus 162 pv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~ 241 (428)
T KOG1549|consen 162 PVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISA 241 (428)
T ss_pred ccCccccccHHHHHHhcCCCceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHcCchheeeec
Confidence 6543333 21 37899999999999999998 3899999999999998732221111334567899999
Q ss_pred ccccCCCCceEEEEEEe
Q 012785 285 SKSTGHAGTRIGWALVK 301 (456)
Q Consensus 285 SK~~g~~G~RiG~l~~~ 301 (456)
.|.||.+| +|++++.
T Consensus 242 HK~ygp~~--iGaLYvr 256 (428)
T KOG1549|consen 242 HKIYGPPG--IGALYVR 256 (428)
T ss_pred ccccCCCc--ceEEEEc
Confidence 99999999 9999997
No 329
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.35 E-value=3.3e-10 Score=123.51 Aligned_cols=281 Identities=11% Similarity=0.044 Sum_probs=187.6
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHH----HHHHHHHHHhcCC-CCCCCcEEEEeCCCCCChhhhhhhcCCeEee
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGST----QLFQAALYALSSQ-DASEPISVVSAAPYYSSYPSITDCVKSRLYK 217 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~----~al~~~~~~l~~~-gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~ 217 (456)
.++|+.++++++. ++|.++++++ +++.++++++.++ ||..+..|+++...+......+...|++++.
T Consensus 571 ~~~r~~la~i~g~--------~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~ 642 (993)
T PLN02414 571 EDLGDLLCEITGF--------DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVV 642 (993)
T ss_pred HHHHHHHHHHhCC--------CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEE
Confidence 5677777777752 6899999998 8999999999866 6643447999998888888888889999998
Q ss_pred eccCc------ccccc------CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCC-CCCCCCCcE
Q 012785 218 WAGDA------KRFNK------DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTS-ITYPADHDL 279 (456)
Q Consensus 218 ~~~d~------~~l~~------~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~-~~~~~~~~i 279 (456)
++.|. +.++. +++++|++++|+|-+|...+ ++|+++|+++++|-++.-..... .+...+-++
T Consensus 643 v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~ 722 (993)
T PLN02414 643 VGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADV 722 (993)
T ss_pred eccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCE
Confidence 87653 33322 25689999999999998865 47889999999999986322111 123456789
Q ss_pred EEecCccccCCC----CceEEEEEEeCHHHHHHHHHHH-----------hhccCcC---Ch----HHHHHHHHHHHhhhC
Q 012785 280 MLFTVSKSTGHA----GTRIGWALVKDMEVAKKMTKYI-----------ELNTIGV---SK----DSQLRAAKVLKVVSD 337 (456)
Q Consensus 280 ~i~S~SK~~g~~----G~RiG~l~~~~~~~~~~l~~~~-----------~~~~~~~---s~----~~q~~a~~~L~~~~~ 337 (456)
+++|..|+|+.| |=-+|.+.+. +++...+-... .....|. ++ ....++...+..+
T Consensus 723 ~~~s~HK~f~~P~G~GGPg~G~l~~~-~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~l-- 799 (993)
T PLN02414 723 CHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMM-- 799 (993)
T ss_pred EEecCCccCCcCcccCCCCeeeEEEc-hhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHH--
Confidence 999999977522 3348999886 76655442110 0011122 12 2222334444421
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC-------ccHHHHH
Q 012785 338 SCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE-------QEIEDCE 410 (456)
Q Consensus 338 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~-------~~~~~~~ 410 (456)
| .+-+++..+....+.+++.+.|++...+.+..+.+.+.+- | .++++ .+.+++.
T Consensus 800 G--------~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hE----------f-v~~~~~l~~~~g~~~~di~ 860 (993)
T PLN02414 800 G--------SEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHE----------F-IIDLRPFKNTAGIEPEDVA 860 (993)
T ss_pred C--------HhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeee----------E-EEeccccccccCCCHHHHH
Confidence 2 4567777888888899999999774333343333321000 1 12332 2347788
Q ss_pred HHHHhCCEEeecCCCCCCCCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 411 SFLKGNKILTRSGKHFGFSPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 411 ~~l~~~gI~v~pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
+.|.++||..-- ..|. ..+.+||+..- ++++++.++++|+++.
T Consensus 861 krL~d~Gihapt-~~~p-v~~~lmiepTE~~skeelDrf~~al~~i~ 905 (993)
T PLN02414 861 KRLMDYGFHAPT-MSWP-VPGTLMIEPTESESKAELDRFCDALISIR 905 (993)
T ss_pred HHHHHcCcEEee-eccc-cCCEEEEEeeeeCCHHHHHHHHHHHHHHH
Confidence 888899998544 3353 48899999763 8999999999998764
No 330
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.34 E-value=2.6e-10 Score=108.44 Aligned_cols=279 Identities=14% Similarity=0.127 Sum_probs=169.0
Q ss_pred cccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhh--h
Q 012785 130 YFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPS--I 207 (456)
Q Consensus 130 ~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~--~ 207 (456)
-|+++.- ...+.+.+++.+++ ..++|++++|++..+++.+.++|++ .|++..-.+-...+ .
T Consensus 30 ~YG~D~~-----~~~~e~~~ae~~g~--------~a~~Fv~sGT~aN~lal~~~~~~~~----~vi~~~~aHi~~~E~Ga 92 (342)
T COG2008 30 VYGEDPT-----TNALEQRIAELFGK--------EAALFVPSGTQANQLALAAHCQPGE----SVICHETAHIYTDECGA 92 (342)
T ss_pred CCCCCHH-----HHHHHHHHHHHhCC--------ceEEEecCccHHHHHHHHHhcCCCC----eEEEeccccceecccCc
Confidence 4666543 35666667776652 5799999999999999999999998 78887765544332 2
Q ss_pred hhhcC--CeEeeec-----cCcccccc-------C--CCeEEEEcCCCCCCcccch--------HHhhhcCcEEEeeecC
Q 012785 208 TDCVK--SRLYKWA-----GDAKRFNK-------D--GPYIELVTSPNNPDGSVRQ--------SVVNRSGGILVHDLAY 263 (456)
Q Consensus 208 ~~~~g--~~~~~~~-----~d~~~l~~-------~--~~~~i~v~~P~NPtG~~~~--------~l~~~~~~~iI~De~y 263 (456)
.+.++ .++...+ ++++.++. . .+..+++.|.+|.-|++++ ++|+++|+.+-.|-+-
T Consensus 93 ~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR 172 (342)
T COG2008 93 PEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGAR 172 (342)
T ss_pred HHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHH
Confidence 23333 3333222 23444432 1 2344555566667899998 2899999999999765
Q ss_pred CCCC---C-CCCCC-CCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCC
Q 012785 264 YWPQ---Y-TSITY-PADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDS 338 (456)
Q Consensus 264 ~~~~---~-~~~~~-~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~ 338 (456)
.+.. . .+... ...-+++..++||..+.| +|.+++.+.+++++++..+.....+.+..--. ++.++..+.+.
T Consensus 173 ~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~---~gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~l-aA~~~~~l~~~ 248 (342)
T COG2008 173 LANALVALGVALKTIKSYVDSVSFCLTKGGGAP---VGAIVFGNRDFAKRARRWRKRAGGLMRKARFL-AAQGLYALEDD 248 (342)
T ss_pred HHHHHHHcCCCHHHHHhhCCEEEEecccCCcce---eeeEEEcCHHHHHHHHHHHHHhcccHhhhhHH-HHHHHHHHhcc
Confidence 4310 0 11111 123467888899987755 59998888999999988766444443332222 22333322232
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCE
Q 012785 339 CKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKI 418 (456)
Q Consensus 339 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI 418 (456)
.-...-++-.+..+.|.+.|...+++++.. ++++|.+++.++... .+.++..|+
T Consensus 249 ----------~~~~~~~Han~mA~~La~~~~~~~G~~~~~-------------~~~tN~vf~~l~~~~---i~~l~~~~~ 302 (342)
T COG2008 249 ----------VWRLAADHANAMAARLAEGLEAKPGVKLAF-------------PVETNMVFVRLPESA---IEALRLAGA 302 (342)
T ss_pred ----------HHHHHHHHHHHHHHHHHHhhhhcCCceecc-------------CCcccEEEEECChHH---HHHHHhhch
Confidence 111222333334667778887665555443 356778999987422 133444444
Q ss_pred EeecCCCCCCCCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 419 LTRSGKHFGFSPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 419 ~v~pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
....|..-+.....+|+..+. ++|++++++..+++++
T Consensus 303 ~~~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 303 LFYRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred hheeeeeccCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 433322111111478988764 8999999999998875
No 331
>PRK04311 selenocysteine synthase; Provisional
Probab=99.31 E-value=1.4e-09 Score=110.66 Aligned_cols=284 Identities=16% Similarity=0.148 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCC------hhhhhhhcCCeEe
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSS------YPSITDCVKSRLY 216 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~------~~~~~~~~g~~~~ 216 (456)
..+++.++++.+. ++.+++++++.++.+++.++ .+|| +|++++..+.. .....+..|++++
T Consensus 130 ~~~e~~lA~l~Ga--------e~a~vv~sgtaAl~l~l~~l-~~Gd----eVIvs~~e~~~~ggs~~i~~~~~~~G~~l~ 196 (464)
T PRK04311 130 RALAALLCALTGA--------EDALVVNNNAAAVLLALNAL-AAGK----EVIVSRGELVEIGGAFRIPDVMRQAGARLV 196 (464)
T ss_pred HHHHHHHHHHhCC--------CeEEEECCHHHHHHHHHHHh-CCCC----EEEEcchhhhhcCcchhhHHHHHHCCcEEE
Confidence 5788888888863 35677777889999988665 7888 99998764331 2335667899988
Q ss_pred eecc----Ccccccc---CCCeEEEEcCCCCCC--cc--cch-----HHhhhcCcEEEeeecCCCC----CC----CCCC
Q 012785 217 KWAG----DAKRFNK---DGPYIELVTSPNNPD--GS--VRQ-----SVVNRSGGILVHDLAYYWP----QY----TSIT 272 (456)
Q Consensus 217 ~~~~----d~~~l~~---~~~~~i~v~~P~NPt--G~--~~~-----~l~~~~~~~iI~De~y~~~----~~----~~~~ 272 (456)
.++. +.+.++. .+++++++.+++||+ |. ..+ ++|+++|+++|+|...... .+ .+..
T Consensus 197 ~v~~~~~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~ 276 (464)
T PRK04311 197 EVGTTNRTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTV 276 (464)
T ss_pred EECCCCCCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCch
Confidence 7764 2233332 368999999999993 53 322 4789999999999953210 01 1111
Q ss_pred ---CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCC-CCCCcchh
Q 012785 273 ---YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCK-PSGSEDEC 348 (456)
Q Consensus 273 ---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~-~~~~~~~~ 348 (456)
...+-+++++|.+|.+|-| ..|+++++ +++++++++....-.+.+......+..+.|....+... +..-..-+
T Consensus 277 ~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~-~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~ 353 (464)
T PRK04311 277 QELLAAGVDLVTFSGDKLLGGP--QAGIIVGK-KELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLR 353 (464)
T ss_pred hhHHhcCCcEEEecCcccccCC--ceEEEEEc-HHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHH
Confidence 1235689999999988745 48999996 88888877432222333444444444444443222210 00000012
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC--C--ccccCC-----CCcccccccccCCCCCceEEeecC---ccHHHHHHHHHhC
Q 012785 349 FFEFTNHQMSTRWKQLRMAVQKSG--L--FSVPEL-----PSQFCTFLGRAFEPQPAFAWLKCE---QEIEDCESFLKGN 416 (456)
Q Consensus 349 ~l~~~~~~~~~~~~~l~~~L~~~~--~--~~~~~~-----~g~~~~~~~~~~~~~~~f~~~~~~---~~~~~~~~~l~~~ 416 (456)
.+....+.++++.+.+.+.|+.+. . .++... .|.+.. . .-+.+ -+.++ .+.+.+.+.|++.
T Consensus 354 ~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~---~---~~~~~-~v~~~~~~~~~~~l~~~lr~~ 426 (464)
T PRK04311 354 LLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPV---D---RLPSA-AVTLTPKDRSLEALAARLRLL 426 (464)
T ss_pred HhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcC---C---CCCeE-EEEEeCCCCCHHHHHHHHhcC
Confidence 233344667778888888888753 1 122211 122200 0 01112 22332 1567888889875
Q ss_pred C--EEeecCCCCCCCCCeEEEEecC-ChhHHHHHHHHHHhhh
Q 012785 417 K--ILTRSGKHFGFSPKYVRISMLD-RDENYNLFVQRLSKIL 455 (456)
Q Consensus 417 g--I~v~pg~~fg~~~~~iRis~~~-~~e~i~~~l~~L~~~l 455 (456)
. |..+- .++.+.+-+-. .+++++.++++|++++
T Consensus 427 ~~~i~~r~------~~~~~~ld~r~~~~~~~~~~~~~~~~~~ 462 (464)
T PRK04311 427 PPPVIGRI------EDGRLLLDLRTLEEEDEERLAAALLEAL 462 (464)
T ss_pred CCCEEEEE------ECCEEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 4 55543 47778888755 7889999999998875
No 332
>PRK02769 histidine decarboxylase; Provisional
Probab=99.29 E-value=7.1e-10 Score=110.57 Aligned_cols=247 Identities=13% Similarity=0.099 Sum_probs=159.5
Q ss_pred EEEccCHHHHHHHHHHHhc--CCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc------Ccccccc----C--CCe
Q 012785 166 IVVGTGSTQLFQAALYALS--SQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG------DAKRFNK----D--GPY 231 (456)
Q Consensus 166 I~~t~G~~~al~~~~~~l~--~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~------d~~~l~~----~--~~~ 231 (456)
-++|+|+||++..++.+.. .+++ +|++++-.++.....++.+|.+...++. |.+.++. . ++.
T Consensus 87 G~~TsGgTean~~a~~~ar~~~~~~----~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~ 162 (380)
T PRK02769 87 GYITNGGTEGNLYGCYLARELFPDG----TLYYSKDTHYSVSKIARLLRIKSRVITSLPNGEIDYDDLISKIKENKNQPP 162 (380)
T ss_pred EEEecChHHHHHHHHHHHHHhCCCc----EEEeCCCceehHHHHHHHcCCCCceeccCCCCcCcHHHHHHHHHhCCCCcE
Confidence 4789999999876665442 4566 8999999999999999999887665553 4444432 1 378
Q ss_pred EEEEcCCCCCCcccch-----HHhhhcC---cEEEeeecCCCCCCC------CCCCCCCCcEEEecCccccCCCCceEEE
Q 012785 232 IELVTSPNNPDGSVRQ-----SVVNRSG---GILVHDLAYYWPQYT------SITYPADHDLMLFTVSKSTGHAGTRIGW 297 (456)
Q Consensus 232 ~i~v~~P~NPtG~~~~-----~l~~~~~---~~iI~De~y~~~~~~------~~~~~~~~~i~i~S~SK~~g~~G~RiG~ 297 (456)
+|+++.++|+||.+-+ ++|+++| +++.+|-+|.+.... ++....+-+.+..|..|.++ .-..+|.
T Consensus 163 lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~-~P~g~G~ 241 (380)
T PRK02769 163 IIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIG-SPMPCGI 241 (380)
T ss_pred EEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCC-CCCCcEE
Confidence 8888999999999977 4888988 699999999863221 12212245778899999877 2345899
Q ss_pred EEEeCHHHHHHHHHHHhh-----ccCc--CChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 012785 298 ALVKDMEVAKKMTKYIEL-----NTIG--VSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQK 370 (456)
Q Consensus 298 l~~~~~~~~~~l~~~~~~-----~~~~--~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~ 370 (456)
++++ ++..+.+...... .+.. -+......+-..|+.+ + .+-+++..++..+..+++.+.|++
T Consensus 242 l~~r-~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~l--g--------~~G~~~~~~~~~~la~~l~~~L~~ 310 (380)
T PRK02769 242 VLAK-KKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSL--G--------SKGLRQRVQHCLDMAQYAVDRLQA 310 (380)
T ss_pred EEEe-hhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHH--C--------HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9997 5555544211000 0111 2223344444444432 1 445677788888888899999987
Q ss_pred cCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC--ChhHHHHHH
Q 012785 371 SGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD--RDENYNLFV 448 (456)
Q Consensus 371 ~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~--~~e~i~~~l 448 (456)
.+...+..| ..+.+.++.+. +.+ . +|..+.+ ..+.+|+.+.. ++|.+++++
T Consensus 311 ~g~~~~~~p--------------~~~~v~f~~~~--~~~---~--~~w~l~~------~~~~~hi~~~~~~~~~~~~~f~ 363 (380)
T PRK02769 311 NGIPAWRNP--------------NSITVVFPCPS--ERI---W--KKWHLAT------SGNQAHIITMPHHNKQQIDSLI 363 (380)
T ss_pred CCCEEEcCC--------------CceEEEEcCCC--HHH---H--hCeeEcc------cCCEEEEEECCCCCHHHHHHHH
Confidence 643223322 22245555442 222 1 4444443 24589999864 778899999
Q ss_pred HHHHhhh
Q 012785 449 QRLSKIL 455 (456)
Q Consensus 449 ~~L~~~l 455 (456)
+.|.+.+
T Consensus 364 ~dl~~~~ 370 (380)
T PRK02769 364 DELIFDL 370 (380)
T ss_pred HHHHHHH
Confidence 9888754
No 333
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.29 E-value=1.4e-10 Score=106.09 Aligned_cols=269 Identities=13% Similarity=0.126 Sum_probs=168.3
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD 221 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d 221 (456)
...|+..||+++++ + +.++.+..-.|...++.++..|.| .|+..+-.+.......+... +.. ..|
T Consensus 114 Hk~LE~kiAqfh~r-------E-D~ilypscfdANag~feail~ped----AvfSDeLNhASIIdGirLck-ry~--h~d 178 (417)
T KOG1359|consen 114 HKLLESKIAQFHGR-------E-DTILYPSCFDANAGAFEAILTPED----AVFSDELNHASIIDGIRLCK-RYR--HVD 178 (417)
T ss_pred HHHHHHHHHHHhCC-------C-ceEEeccccccchHHHHHhcChhh----hhhccccccchhhhhhHHHh-hhc--cch
Confidence 47899999999975 3 455666666888888889999988 88888888887777666543 111 112
Q ss_pred ccccc-----c--CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCC----CCCCCCC----CCCCCcEEE
Q 012785 222 AKRFN-----K--DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYW----PQYTSIT----YPADHDLML 281 (456)
Q Consensus 222 ~~~l~-----~--~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~----~~~~~~~----~~~~~~i~i 281 (456)
.-.++ . .+-++|+.-..-.-.|-+.| +++++||.++++||++.- +.-.+.. -..+-+|..
T Consensus 179 v~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiin 258 (417)
T KOG1359|consen 179 VFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIIN 258 (417)
T ss_pred hHHHHHHHHHhhhheEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehh
Confidence 21221 1 23455555444455666655 378899999999999872 1111111 234568999
Q ss_pred ecCccccC-CCCceEEEEEEeCHHHHHHHHHHHhhccCc--CChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHH
Q 012785 282 FTVSKSTG-HAGTRIGWALVKDMEVAKKMTKYIELNTIG--VSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMS 358 (456)
Q Consensus 282 ~S~SK~~g-~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~--~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~ 358 (456)
+|++|.+| ..| ||..+| +.+++.+++..+..-++ .+|-.--.+++++..+... ......++
T Consensus 259 sTLgKAlGga~G---Gyttgp-~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s------------~~~i~~~~ 322 (417)
T KOG1359|consen 259 STLGKALGGASG---GYTTGP-KPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVS------------SKEIQSRQ 322 (417)
T ss_pred hhhhhhhcCCCC---CCccCC-hhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhh------------HHHHHHHH
Confidence 99999986 455 999998 88988887764422222 2222222333333322222 13445566
Q ss_pred HHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCC---CCCCeEEE
Q 012785 359 TRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFG---FSPKYVRI 435 (456)
Q Consensus 359 ~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg---~~~~~iRi 435 (456)
.+++.+++..+..+ +++....-..|+ +.+.-..-...+.+.+.+.||.|.. ..|. .+...+|+
T Consensus 323 a~~qrfr~~me~aG-ftIsg~~hPI~p------------v~lGda~lA~~~ad~lLk~Gi~Vig-fs~PvVP~gkariRV 388 (417)
T KOG1359|consen 323 ANTQRFREFMEAAG-FTISGASHPICP------------VMLGDARLASKMADELLKRGIYVIG-FSYPVVPKGKARIRV 388 (417)
T ss_pred HHHHHHHHHHHhcC-ceecCCCCCccc------------eecccHHHHHHHHHHHHhcCceEEe-ecCCcCCCCceEEEE
Confidence 77778887776654 555432222221 2222111345577788899999985 3343 24557888
Q ss_pred EecC--ChhHHHHHHHHHHhhh
Q 012785 436 SMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 436 s~~~--~~e~i~~~l~~L~~~l 455 (456)
.++. ++|+++++++++.++.
T Consensus 389 qiSAaHt~edid~~i~Af~~vg 410 (417)
T KOG1359|consen 389 QISAAHTEEDIDRLIEAFSEVG 410 (417)
T ss_pred EEehhcCHHHHHHHHHHHHHHH
Confidence 8765 9999999999998764
No 334
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.27 E-value=1.2e-09 Score=110.52 Aligned_cols=288 Identities=12% Similarity=0.085 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHH-HhcCccCCCceEE--EccCHHHHHHHHHHHhcC--------CCC-CCCcEEEEeCCCCCChhhhhhh
Q 012785 143 PEFAKEVVRLHK-VVGNAITENHHIV--VGTGSTQLFQAALYALSS--------QDA-SEPISVVSAAPYYSSYPSITDC 210 (456)
Q Consensus 143 ~~lr~aia~~~~-~~g~~~~~~~~I~--~t~G~~~al~~~~~~l~~--------~gd-~~~~~Vlv~~P~y~~~~~~~~~ 210 (456)
.++.+.+.+|+. ..|.+.. .+++. +|+|++|++..++.+... .|. ..+..|++++-.++.....++.
T Consensus 79 ~~le~~~~~~la~llg~~~~-~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~ 157 (431)
T TIGR01788 79 AEIENRCVNMLADLWHAPAK-DAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARY 157 (431)
T ss_pred HHHHHHHHHHHHHHhCCCCC-CCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHH
Confidence 355555555553 3443311 03454 489999999998866531 110 0112799999999999999999
Q ss_pred cCCeEeeeccCccc-------ccc---CCCeEEEEcCCCCCCcccch-----HHhhhc------CcEEEeeecCCCCC--
Q 012785 211 VKSRLYKWAGDAKR-------FNK---DGPYIELVTSPNNPDGSVRQ-----SVVNRS------GGILVHDLAYYWPQ-- 267 (456)
Q Consensus 211 ~g~~~~~~~~d~~~-------l~~---~~~~~i~v~~P~NPtG~~~~-----~l~~~~------~~~iI~De~y~~~~-- 267 (456)
+|+++..++.|.++ ++. .++.+|+++..+|.||.+.+ ++|+++ ++++.+|-+|.+..
T Consensus 158 lg~~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p 237 (431)
T TIGR01788 158 FDVELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAP 237 (431)
T ss_pred cCceeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHH
Confidence 99888777766432 322 25678888889999999987 488888 99999999998421
Q ss_pred --C--CCCC-CCCCCcEEEecCcccc-CCCCceEEEEEEeCHH-HHHHHHH---HHh----hccCcCChHHHHHHHHHHH
Q 012785 268 --Y--TSIT-YPADHDLMLFTVSKST-GHAGTRIGWALVKDME-VAKKMTK---YIE----LNTIGVSKDSQLRAAKVLK 333 (456)
Q Consensus 268 --~--~~~~-~~~~~~i~i~S~SK~~-g~~G~RiG~l~~~~~~-~~~~l~~---~~~----~~~~~~s~~~q~~a~~~L~ 333 (456)
. .+.. ....-+-+..|..|.+ +..| +|.+++++++ +.+.+.. +.. ..+...+...-.++...+.
T Consensus 238 ~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g--~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~ 315 (431)
T TIGR01788 238 FVYPDLEWDFRLPRVKSINVSGHKYGLVYPG--VGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYN 315 (431)
T ss_pred HhCCCchhhcCCCCceEEEECchhccCCCCC--cEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHH
Confidence 1 1111 1223356888999965 6555 8999987543 2232211 100 0122223322112222221
Q ss_pred hhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCC--CCcccccccccCCCCCceEEeecCc------c
Q 012785 334 VVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPEL--PSQFCTFLGRAFEPQPAFAWLKCEQ------E 405 (456)
Q Consensus 334 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~g~~~~~~~~~~~~~~~f~~~~~~~------~ 405 (456)
+..- ...-+++..++..+..+++.+.|++.+.+++..+ ..+ -+.+++++ +
T Consensus 316 -l~~l-------G~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~--------------iV~Fr~~~~~~~~~~ 373 (431)
T TIGR01788 316 -FLRL-------GREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIP--------------LVAFKLKDDADPGYT 373 (431)
T ss_pred -HHHh-------cHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCce--------------EEEEEeCCCCCCCcC
Confidence 1111 1345667777788888899999998877776543 222 23344431 3
Q ss_pred HHHHHHHHHhCCEEeecCCCC-C-CCCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 406 IEDCESFLKGNKILTRSGKHF-G-FSPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 406 ~~~~~~~l~~~gI~v~pg~~f-g-~~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
..++.+.|.++|+.+..-..- . .+.-++|+++-. +++.++++++.|++++
T Consensus 374 ~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~ 427 (431)
T TIGR01788 374 LYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAAL 427 (431)
T ss_pred HHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 567888899999875432110 0 123468999742 7788999999988765
No 335
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.24 E-value=3.8e-09 Score=108.32 Aligned_cols=253 Identities=14% Similarity=0.088 Sum_probs=149.3
Q ss_pred cCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChh-hh-----hhhcCCeE----eeecc-------Ccccccc----C
Q 012785 170 TGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYP-SI-----TDCVKSRL----YKWAG-------DAKRFNK----D 228 (456)
Q Consensus 170 ~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~-~~-----~~~~g~~~----~~~~~-------d~~~l~~----~ 228 (456)
..+++|+..++.+|+++|| +|+..+....++. +. .+..+... ++|.. |.+.++. .
T Consensus 107 ~SG~~AN~av~~aL~~pgD----~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~ 182 (475)
T PLN03226 107 LSGSPANFAVYTALLQPHD----RIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLF 182 (475)
T ss_pred CchHHHHHHHHHHhCCCCC----EEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhc
Confidence 5667888899999999999 9998553111111 11 11112221 13322 4444432 3
Q ss_pred CCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCC--CCCCC-CCCCcEEEecCcccc-CCCCceEEEEE
Q 012785 229 GPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQY--TSITY-PADHDLMLFTVSKST-GHAGTRIGWAL 299 (456)
Q Consensus 229 ~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~--~~~~~-~~~~~i~i~S~SK~~-g~~G~RiG~l~ 299 (456)
++++|++. .++ +|...+ ++|+++|+++++|+++.-... ...+. ...-+++++|++|++ |..| |+++
T Consensus 183 ~pklIv~~-~S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~GP~G---g~I~ 257 (475)
T PLN03226 183 RPKLIIAG-ASA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLRGPRG---GMIF 257 (475)
T ss_pred CCeEEEEe-cCc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCcccccCCCc---eEEE
Confidence 56766553 233 444443 489999999999999873111 00111 124579999999988 5444 8888
Q ss_pred EeCHHHH-----------H---HHHHHHhh-ccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHH
Q 012785 300 VKDMEVA-----------K---KMTKYIEL-NTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQL 364 (456)
Q Consensus 300 ~~~~~~~-----------~---~l~~~~~~-~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l 364 (456)
++ +++. + .+...... ...++++....++...|+.+... ..+..++++.++.+.|
T Consensus 258 ~~-~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~----------~~~~~~~~~~~na~~L 326 (475)
T PLN03226 258 FR-KGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTP----------EFKAYQKQVKANAAAL 326 (475)
T ss_pred Ec-hhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCc----------CHHHHHHHHHHHHHHH
Confidence 86 5433 1 12211111 12233333333444556543322 2355678888999999
Q ss_pred HHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc---cHHHHHHHHHhCCEEeecCCCCC----CCCCeEEEEe
Q 012785 365 RMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ---EIEDCESFLKGNKILTRSGKHFG----FSPKYVRISM 437 (456)
Q Consensus 365 ~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~~l~~~gI~v~pg~~fg----~~~~~iRis~ 437 (456)
.+.|.+.+ +.+..+. .....+++.+.. +..++.+.|.+.||.+..+...+ ..+..+|++.
T Consensus 327 ~~~L~~~G-~~l~~~~------------t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt 393 (475)
T PLN03226 327 ANRLMSKG-YKLVTGG------------TDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGT 393 (475)
T ss_pred HHHHHhCC-CEEEcCC------------CCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCc
Confidence 99998854 4444321 011246667632 56778899999999998764322 1356689853
Q ss_pred c------CChhHHHHHHHHHHhhh
Q 012785 438 L------DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 438 ~------~~~e~i~~~l~~L~~~l 455 (456)
. .++++++++.+.|.+++
T Consensus 394 ~~lt~~g~~~~d~~~ia~~i~~~~ 417 (475)
T PLN03226 394 PAMTSRGLVEKDFEKVAEFLHRAV 417 (475)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHH
Confidence 2 27889999999888776
No 336
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.24 E-value=1.8e-11 Score=120.65 Aligned_cols=184 Identities=15% Similarity=0.112 Sum_probs=122.1
Q ss_pred HHHHHHHHHH-HHhcCccCCCceEEEccCHHHHHHHHHHHhc------C-CCCCCCcEEEEeCCCCCChhhhhhhcCCe-
Q 012785 144 EFAKEVVRLH-KVVGNAITENHHIVVGTGSTQLFQAALYALS------S-QDASEPISVVSAAPYYSSYPSITDCVKSR- 214 (456)
Q Consensus 144 ~lr~aia~~~-~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~------~-~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~- 214 (456)
+....+++.+ ...+. ..+++++++++++|++.+++... . ++.. +|+...-+|++....+...+..
T Consensus 59 ~~~~~la~~L~~~~p~---~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~---~il~~~~~yHG~t~~~~s~~~~~ 132 (339)
T PF00202_consen 59 PEAAELAEKLAELFPG---GLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRR---KILAFEGSYHGRTLGALSLTGNP 132 (339)
T ss_dssp HHHHHHHHHHHHHSST---TEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTT---EEEEETTTB-TSSHHHHHHSSST
T ss_pred cchhhhhhhhhhcccc---ccceeeeccCchHHHHHHHHHhhcccccccccCCc---eEEEeeeeeeccCcccccccCCc
Confidence 4444455554 33211 24689999999999999999876 2 2332 8999999999977655443211
Q ss_pred ------------Eeeecc-Cccc--------------c---ccCCCeEEEEcCCCCCCcccch---------HHhhhcCc
Q 012785 215 ------------LYKWAG-DAKR--------------F---NKDGPYIELVTSPNNPDGSVRQ---------SVVNRSGG 255 (456)
Q Consensus 215 ------------~~~~~~-d~~~--------------l---~~~~~~~i~v~~P~NPtG~~~~---------~l~~~~~~ 255 (456)
+..++. |... + ...+..++++..-+.-.|...+ ++|+++|+
T Consensus 133 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gi 212 (339)
T PF00202_consen 133 PYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGI 212 (339)
T ss_dssp HHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-
T ss_pred cccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehccccccccc
Confidence 111222 2212 1 1124566666544555565544 38999999
Q ss_pred EEEeeecCCCCCCCCCCC-----CCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHH
Q 012785 256 ILVHDLAYYWPQYTSITY-----PADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAK 330 (456)
Q Consensus 256 ~iI~De~y~~~~~~~~~~-----~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~ 330 (456)
++|.||++.+...++... .-+.+|++ ++|.++ .|+.+|.++++ +++.+.+.......|++.++++..++.+
T Consensus 213 llI~DEV~tG~gRtG~~~a~~~~gv~PDiv~--~gK~l~-gG~p~sav~~~-~~i~~~~~~~~~~~T~~g~p~~~aaa~~ 288 (339)
T PF00202_consen 213 LLIADEVQTGFGRTGKFFASEHYGVDPDIVT--FGKGLG-GGLPISAVLGS-EEIMEAFQPGSHGSTFGGNPLSCAAALA 288 (339)
T ss_dssp EEEEEETTTTTTTTSSSSGHHHHTSSSSEEE--EEGGGG-TTSSEEEEEEE-HHHHTTSCTTSSTCTTTT-HHHHHHHHH
T ss_pred ceecccccccccccCCccceecccccCcccc--cccchh-hhhhccccccc-chhhccccccccccccccchHhhhhhhh
Confidence 999999999765544221 22346665 569999 88999999997 9988887666666799999999999999
Q ss_pred HHHhhhC
Q 012785 331 VLKVVSD 337 (456)
Q Consensus 331 ~L~~~~~ 337 (456)
.|+.+.+
T Consensus 289 ~l~~~~~ 295 (339)
T PF00202_consen 289 TLEILEE 295 (339)
T ss_dssp HHHHHHH
T ss_pred HHHhhcc
Confidence 9997655
No 337
>PLN03032 serine decarboxylase; Provisional
Probab=99.22 E-value=3e-09 Score=105.41 Aligned_cols=267 Identities=14% Similarity=0.083 Sum_probs=163.1
Q ss_pred HHHHHHHHHHHH-HhcCccCCCceE--EEccCHHHHHHHHHHHhcC--CCCCCCcEEEEeCCCCCChhhhhhhcCCeEee
Q 012785 143 PEFAKEVVRLHK-VVGNAITENHHI--VVGTGSTQLFQAALYALSS--QDASEPISVVSAAPYYSSYPSITDCVKSRLYK 217 (456)
Q Consensus 143 ~~lr~aia~~~~-~~g~~~~~~~~I--~~t~G~~~al~~~~~~l~~--~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~ 217 (456)
.++.+.+.+++. ..|. +++++ ++|+|+|+++..++.+... ++. .|+++.-.++.....++.+|.++..
T Consensus 65 ~~~e~~v~~~ia~llg~---~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~----~vi~s~~~H~Sv~kaa~~lg~~~~~ 137 (374)
T PLN03032 65 RQFEVGVLDWFARLWEL---EKDEYWGYITTCGTEGNLHGILVGREVFPDG----ILYASRESHYSVFKAARMYRMEAVK 137 (374)
T ss_pred HHHHHHHHHHHHHHhCC---CCccCCEEEeCchHHHHHHHHHHHHHhCCCc----EEEeCCCceeHHHHHHHHcCCCCeE
Confidence 455555555542 2333 23455 8999999999988876542 344 7888888888999999999887766
Q ss_pred eccCc------ccccc----C--CCeEEEEcCCCCCCcccch-----HHhhhcC-----cEEEeeecCCCCCCC-----C
Q 012785 218 WAGDA------KRFNK----D--GPYIELVTSPNNPDGSVRQ-----SVVNRSG-----GILVHDLAYYWPQYT-----S 270 (456)
Q Consensus 218 ~~~d~------~~l~~----~--~~~~i~v~~P~NPtG~~~~-----~l~~~~~-----~~iI~De~y~~~~~~-----~ 270 (456)
++.|. +.++. . ++.+++++..+|+||.+-+ ++|+++| +++.+|-+|.+.... +
T Consensus 138 V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~ 217 (374)
T PLN03032 138 VPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAP 217 (374)
T ss_pred eeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCc
Confidence 65543 33332 1 3667778789999999976 4888886 589999999863111 1
Q ss_pred -CCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhh-----ccCcCChHH--HHHHHHHHHhhhCCCCCC
Q 012785 271 -ITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIEL-----NTIGVSKDS--QLRAAKVLKVVSDSCKPS 342 (456)
Q Consensus 271 -~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~-----~~~~~s~~~--q~~a~~~L~~~~~~~~~~ 342 (456)
+.....-+-+..|..|..| .-.-+|.+++. .+..+.+...... .+...|... ...+-..|.. -|
T Consensus 218 ~~~~~~~vDSis~s~HK~~g-~P~g~G~ll~r-~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~--~G---- 289 (374)
T PLN03032 218 EVTFRKPIGSVSVSGHKFLG-CPMPCGVALTR-KKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRR--KG---- 289 (374)
T ss_pred ccCCCcCCcEEEECcccccC-CCcCeEEEEEE-chhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHH--hC----
Confidence 1111123567889999877 23558999998 5555544321111 123333322 2222222332 22
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeec
Q 012785 343 GSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRS 422 (456)
Q Consensus 343 ~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~p 422 (456)
.+-+.++.+..-+..+++.+.|++.+...+..|. .+-+.++.+... . + .+|-.+.+
T Consensus 290 ----~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~--------------~~~V~f~~~~~~-~----~-~~~w~l~~ 345 (374)
T PLN03032 290 ----YRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNEL--------------SSTVVFERPMDE-A----F-IKKWQLAC 345 (374)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECCC--------------ceEEEEcCCCcH-h----H-hheeeecc
Confidence 4556667777778888888889886533233332 223444444211 1 1 13444443
Q ss_pred CCCCCCCCCeEEEEecC--ChhHHHHHHHHHHhh
Q 012785 423 GKHFGFSPKYVRISMLD--RDENYNLFVQRLSKI 454 (456)
Q Consensus 423 g~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~ 454 (456)
..+.+|+++.. +++.++++++.|++.
T Consensus 346 ------~~~~~hi~vm~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 346 ------EGDIAHVVVMPNVTVEKLDEFVEELVEV 373 (374)
T ss_pred ------cCCEEEEEECCCCCHHHHHHHHHHHhcc
Confidence 24589999864 678999999988763
No 338
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.21 E-value=6.9e-09 Score=105.42 Aligned_cols=281 Identities=15% Similarity=0.147 Sum_probs=165.7
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCC---C---hhhhhhhcCCeEe
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYS---S---YPSITDCVKSRLY 216 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~---~---~~~~~~~~g~~~~ 216 (456)
..+++.++++.+. + ..+++++++.++.+++.+ +.+|| +|++.+..|. + +....+..|++++
T Consensus 125 ~~le~~lA~l~ga-------e-~alvv~sg~aAi~l~l~~-l~~Gd----eVIvs~~e~v~~ggs~~i~~~~~~~G~~~~ 191 (454)
T TIGR00474 125 SHVEGLLCELTGA-------E-DALVVNNNAAAVLLALNT-LAKGK----EVIVSRGELVEIGGSFRIPDVMEQSGAKLV 191 (454)
T ss_pred HHHHHHHHHHhCC-------C-cEEEECCHHHHHHHHHHH-hCCcC----EEEECCChhhhhcchhhHHHHHHHcCCEEE
Confidence 6888889988863 2 344566677888888855 57888 9999886642 2 2345667799998
Q ss_pred eecc----Ccccccc---CCCeEEEEcCCCCCC--cc--cch-----HHhhhcCcEEEeeecCCC--C------CCCCCC
Q 012785 217 KWAG----DAKRFNK---DGPYIELVTSPNNPD--GS--VRQ-----SVVNRSGGILVHDLAYYW--P------QYTSIT 272 (456)
Q Consensus 217 ~~~~----d~~~l~~---~~~~~i~v~~P~NPt--G~--~~~-----~l~~~~~~~iI~De~y~~--~------~~~~~~ 272 (456)
.++. |.+.++. .+++++++.+++||+ |. ..+ ++|+++|+++|+|....- + ...+..
T Consensus 192 ~v~~~~~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~ 271 (454)
T TIGR00474 192 EVGTTNRTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTV 271 (454)
T ss_pred EeCCCCCCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCccc
Confidence 8764 3333432 368999999999995 63 333 488999999999986321 0 011111
Q ss_pred ---CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCC-CCCCcchh
Q 012785 273 ---YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCK-PSGSEDEC 348 (456)
Q Consensus 273 ---~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~-~~~~~~~~ 348 (456)
...+-+++++|.+|.+|-| ..|+++++ +++++++++..-.-.+.+..+...+..+.+....+... +..-..-+
T Consensus 272 ~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~-~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~ 348 (454)
T TIGR00474 272 QEVIAAGVDLVTFSGDKLLGGP--QAGIIVGK-KELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLR 348 (454)
T ss_pred ccHhHcCCCEEEecCccccCCC--eEEEEEEC-HHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHH
Confidence 1234579999999988645 47999996 88877665432222233444444454555543322210 00000012
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc--CCc--cccCC-----CCcccccccccCCCCCce-EEeecC-ccHHHHHHHHHhCC
Q 012785 349 FFEFTNHQMSTRWKQLRMAVQKS--GLF--SVPEL-----PSQFCTFLGRAFEPQPAF-AWLKCE-QEIEDCESFLKGNK 417 (456)
Q Consensus 349 ~l~~~~~~~~~~~~~l~~~L~~~--~~~--~~~~~-----~g~~~~~~~~~~~~~~~f-~~~~~~-~~~~~~~~~l~~~g 417 (456)
.+....+..+++...+.+.|+.. +.+ ++... .|.+. .. .-+.| +-++.. .+...+.+.|++..
T Consensus 349 ~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p---~~---~l~~~~v~~~~~~~~~~~l~~~lr~~~ 422 (454)
T TIGR00474 349 MLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLP---DE---RLPSYAVTLTPDGLSAEKLEARLRELP 422 (454)
T ss_pred HhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCc---CC---CCCeEEEEEecCCCCHHHHHHHHhcCC
Confidence 23333456667778888888763 211 22221 12220 00 01112 222222 25678889998876
Q ss_pred --EEeecCCCCCCCCCeEEEEecC-ChhHHHHHHHHH
Q 012785 418 --ILTRSGKHFGFSPKYVRISMLD-RDENYNLFVQRL 451 (456)
Q Consensus 418 --I~v~pg~~fg~~~~~iRis~~~-~~e~i~~~l~~L 451 (456)
|..+- .++.+-+-+-. .+++++.++++|
T Consensus 423 ~~ii~r~------~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 423 PPIIGRI------EDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred CCEEEEE------ECCEEEEEeCcCCHHHHHHHHHHh
Confidence 45442 46777787754 778888888776
No 339
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.21 E-value=2.5e-08 Score=97.70 Aligned_cols=262 Identities=13% Similarity=0.131 Sum_probs=177.6
Q ss_pred ceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCC--hhhhhhhcCCeEeeecc------Ccccccc-----CCC
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSS--YPSITDCVKSRLYKWAG------DAKRFNK-----DGP 230 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~--~~~~~~~~g~~~~~~~~------d~~~l~~-----~~~ 230 (456)
+-++++.+++-+++.++..+.+||| +|++..-+..+ +.++++.+|.++..+.. |++.++. .+.
T Consensus 57 ~~~ll~gsGt~amEAav~sl~~pgd----kVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~ 132 (383)
T COG0075 57 DVVLLSGSGTLAMEAAVASLVEPGD----KVLVVVNGKFGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDI 132 (383)
T ss_pred cEEEEcCCcHHHHHHHHHhccCCCC----eEEEEeCChHHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCc
Confidence 4577888899999999999999999 99988877765 56789999998875443 3443322 245
Q ss_pred eEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCC-CCCCCCcEEEecCccccC-CCCceEEEEEEeCH
Q 012785 231 YIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSI-TYPADHDLMLFTVSKSTG-HAGTRIGWALVKDM 303 (456)
Q Consensus 231 ~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~-~~~~~~~i~i~S~SK~~g-~~G~RiG~l~~~~~ 303 (456)
+++.++..--+||...+ ++|++++.++|+|-+=+-.. .++ .+..+-++++.+-=|.++ .|| +|.+.++ +
T Consensus 133 ~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg-~~~~vd~wgiDv~itgSQK~l~~PPG--la~v~~S-~ 208 (383)
T COG0075 133 KAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGG-EPLKVDEWGIDVAITGSQKALGAPPG--LAFVAVS-E 208 (383)
T ss_pred cEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCC-cccchhhcCccEEEecCchhccCCCc--cceeEEC-H
Confidence 67777665567898877 37889999999998755211 122 244566899999999995 667 6888886 6
Q ss_pred HHHHHHHHHH------------------hhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHH
Q 012785 304 EVAKKMTKYI------------------ELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLR 365 (456)
Q Consensus 304 ~~~~~l~~~~------------------~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ 365 (456)
+..+++.... ....+.++...-++..+.|+.+.. +-++...++.++..+.++
T Consensus 209 ~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~----------EGle~r~~RH~~~~~a~r 278 (383)
T COG0075 209 RALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILE----------EGLEARIARHRRLAEALR 278 (383)
T ss_pred HHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHH----------hhHHHHHHHHHHHHHHHH
Confidence 6555554221 123445555566666677765433 347788889999999999
Q ss_pred HHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--cH-HHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC--C
Q 012785 366 MAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EI-EDCESFLKGNKILTRSGKHFGFSPKYVRISMLD--R 440 (456)
Q Consensus 366 ~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~-~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~--~ 440 (456)
+.++.++.-.+. +..+ ..++-.-+.+|+ +. +.....++++|+.+.+|..- .....+||+.-. +
T Consensus 279 ~~~~alGl~~~~--~~~~---------~s~tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~~-l~gkifRIGhMG~~~ 346 (383)
T COG0075 279 AGLEALGLELFA--DPER---------RSPTVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQGP-LKGKIFRIGHMGNVR 346 (383)
T ss_pred HHHHHcCCcccc--Cccc---------CCCceEEEECCCCCCcHHHHHHHHHhCCEEecccccc-cCccEEEEecCccCC
Confidence 999988743333 1111 111123334443 23 33445667779999886532 246799999543 7
Q ss_pred hhHHHHHHHHHHhhh
Q 012785 441 DENYNLFVQRLSKIL 455 (456)
Q Consensus 441 ~e~i~~~l~~L~~~l 455 (456)
.+++..++..|..+|
T Consensus 347 ~~dv~~~l~ale~~L 361 (383)
T COG0075 347 PEDVLAALAALEAAL 361 (383)
T ss_pred HHHHHHHHHHHHHHH
Confidence 889999999888765
No 340
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.17 E-value=2.6e-09 Score=101.73 Aligned_cols=271 Identities=14% Similarity=0.172 Sum_probs=177.4
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhc--CCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeec-
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALS--SQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWA- 219 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~--~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~- 219 (456)
.+|++.+|++++. +.-++|+ +.--|....+..|. -||- .|...+-.+...+...+..++.-+-|.
T Consensus 219 v~LE~eLA~LHqK-------~aALlFs-SCfVANDstLftLak~lpgc----ei~SD~gNHASMI~GIrns~v~K~IFrH 286 (570)
T KOG1360|consen 219 VRLEAELADLHQK-------EAALLFS-SCFVANDSTLFTLAKKLPGC----EIFSDEGNHASMIQGIRNSRVPKHIFRH 286 (570)
T ss_pred hhHHHHHHHHhcC-------cceeeee-eeeeccchHHHHHHHHCCCc----EEeccccchHHHHHHhhhcCCcceeecc
Confidence 5667777777753 2223322 22233333333332 3666 777777777777777777776544443
Q ss_pred cCcccccc-------CCCeEEEEcCCCCCCcccch--H---HhhhcCcEEEeeecCC----CCCCCCCCCC----CCCcE
Q 012785 220 GDAKRFNK-------DGPYIELVTSPNNPDGSVRQ--S---VVNRSGGILVHDLAYY----WPQYTSITYP----ADHDL 279 (456)
Q Consensus 220 ~d~~~l~~-------~~~~~i~v~~P~NPtG~~~~--~---l~~~~~~~iI~De~y~----~~~~~~~~~~----~~~~i 279 (456)
-|.+.++. .-+|+|-..+.+.-+|.+.+ + ++++||.+.+.||++. ++.-.++... ..-+|
T Consensus 287 ND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDi 366 (570)
T KOG1360|consen 287 NDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDI 366 (570)
T ss_pred CCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhh
Confidence 35555532 24789989999999999977 3 6679999999999986 3433444322 23478
Q ss_pred EEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhh--ccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHH
Q 012785 280 MLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIEL--NTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQM 357 (456)
Q Consensus 280 ~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~--~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~ 357 (456)
.-+|+.|+||.-| ||+.+. ..+++.++.+... .+...+|.....|.+.++.+... .=..+|+.-
T Consensus 367 IsGTLgKafGcVG---GYIAat-~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~----------eg~~lR~~h 432 (570)
T KOG1360|consen 367 ISGTLGKAFGCVG---GYIAAT-RKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSE----------EGRVLRRQH 432 (570)
T ss_pred cccchhhhccccc---ceehhh-hhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhh----------hhHHHHHHH
Confidence 8999999999887 999996 9999999988543 34456666666666666643222 123456677
Q ss_pred HHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc---cHHHHHHHHHhCCEEeecCCCCCC---CCC
Q 012785 358 STRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ---EIEDCESFLKGNKILTRSGKHFGF---SPK 431 (456)
Q Consensus 358 ~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~~l~~~gI~v~pg~~fg~---~~~ 431 (456)
+++-+++++.|.+.+.-.++.|. . .+-+.+.+ ..+.+..++.++||+|.. ..|.. ++.
T Consensus 433 qrnv~~~kq~l~~~GiPVi~~pS--H-------------IiPv~vgda~l~~~~sd~Li~~h~iYvQa-INyPTV~rG~E 496 (570)
T KOG1360|consen 433 QRNVKYVKQLLMELGIPVIPNPS--H-------------IIPVRVGDAALAKQASDILISKHNIYVQA-INYPTVARGTE 496 (570)
T ss_pred HHHHHHHHHHHHHcCCcccCCCc--c-------------eeeeeccCHHHHHHHHHHHHHhcCeEEEe-ccCCcccccce
Confidence 77888899999887643222221 1 23444433 234566678899999986 45542 677
Q ss_pred eEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 432 YVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 432 ~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
.+||.-+. +++-++.+++.|..+.
T Consensus 497 ~LRiaPTP~HT~~mm~~lv~~l~~vw 522 (570)
T KOG1360|consen 497 RLRIAPTPHHTPQMMNILVNALLDVW 522 (570)
T ss_pred eeecCCCCCCCHHHHHHHHHHHHHHH
Confidence 89998654 7888888888887664
No 341
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.16 E-value=1e-08 Score=93.09 Aligned_cols=268 Identities=14% Similarity=0.110 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeec---
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWA--- 219 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~--- 219 (456)
..+.+.+++|++. +.+=+|+|+.++=+++..+++++|| -|++..-.+....-.++.+|+++..++
T Consensus 64 ~~F~~dlaeFlg~--------D~~R~t~GARe~KfavMhal~~~gd----~vV~D~~aHYttyvAAEragl~v~eVp~tg 131 (382)
T COG1103 64 KDFLEDLAEFLGM--------DEVRVTAGAREAKFAVMHALCKEGD----WVVVDSLAHYTTYVAAERAGLNVAEVPNTG 131 (382)
T ss_pred HHHHHHHHHHhCC--------ceeeecccchhhHHHHHHHhccCCC----EEEEcCcchHHHHHHHHhcCCeEEecCCCC
Confidence 5677779999974 5788999999999999999999999 899988887777778888999987544
Q ss_pred -----cCcccc-------ccC---CCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCC-CCCCCc
Q 012785 220 -----GDAKRF-------NKD---GPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSIT-YPADHD 278 (456)
Q Consensus 220 -----~d~~~l-------~~~---~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~-~~~~~~ 278 (456)
+++++. +.. .+.+.+++.|..--|...+ ++|++++++++..-+|.-. .-+.. .....+
T Consensus 132 ~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~G-rmpvs~ke~g~D 210 (382)
T COG1103 132 YPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVG-RMPVSGKEIGAD 210 (382)
T ss_pred CCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeec-cccccccccCCC
Confidence 333332 111 3678888888777787766 4999999999999999832 22221 334668
Q ss_pred EEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhh------------ccCcCChHHHHHHHHHHHhhhCCCCCCCCcc
Q 012785 279 LMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIEL------------NTIGVSKDSQLRAAKVLKVVSDSCKPSGSED 346 (456)
Q Consensus 279 i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~------------~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~ 346 (456)
++++|=.|++. +.-++|.+... +++.+.+.+.... +..|.+ +.- ++.++ . +.
T Consensus 211 FiVgSGHKsmA-As~PiGvl~~~-eE~ae~V~r~Sg~~~~~KEvellGCT~rGap-ivT-----lmASf--P------~V 274 (382)
T COG1103 211 FIVGSGHKSMA-ASAPIGVLAMS-EEWAEIVLRRSGRAFPKKEVELLGCTVRGAP-IVT-----LMASF--P------HV 274 (382)
T ss_pred EEEecCccchh-ccCCeeEEeeh-hHHHHHHHhhcccccccceeeeecccccCch-HHH-----HHhcC--H------HH
Confidence 99999999998 66799999997 8888876544311 111222 111 11110 0 11
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc----------cHHHHHHHHHhC
Q 012785 347 ECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----------EIEDCESFLKGN 416 (456)
Q Consensus 347 ~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----------~~~~~~~~l~~~ 416 (456)
.+.+++--+.+ ++.+.+.+.|++++++.......-- --.+.+..|. ..-++++.|+++
T Consensus 275 ~eRVkrWdeEv-~kaR~fv~elEkigg~~qlG~rPk~-----------HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~R 342 (382)
T COG1103 275 VERVKRWDEEV-EKARWFVAELEKIGGVKQLGERPKN-----------HDLMKFETPVFHEIAKKHKRKGYFLYEELKKR 342 (382)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhhhHHHhCCCCcc-----------cceeeecCchHHHHHHhCcCCceeeHHHHHhc
Confidence 22222222233 2334566677777644322111100 0012222221 234578889999
Q ss_pred CEE-eecCCCCCCCCCeEEEEecC-ChhHHHHHHHHHHhhhC
Q 012785 417 KIL-TRSGKHFGFSPKYVRISMLD-RDENYNLFVQRLSKILS 456 (456)
Q Consensus 417 gI~-v~pg~~fg~~~~~iRis~~~-~~e~i~~~l~~L~~~l~ 456 (456)
||. +.||. ..++.+|+-. +.|+++..++.++++++
T Consensus 343 gI~GI~~G~-----Tk~~K~svyGl~~Eqve~V~~afkeI~e 379 (382)
T COG1103 343 GIHGIQPGQ-----TKYFKLSVYGLSWEQVEYVVDAFKEIAE 379 (382)
T ss_pred CccccccCc-----eeEEEEEeecCCHHHHHHHHHHHHHHHH
Confidence 986 45543 6789999765 99999999999998863
No 342
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=5.3e-10 Score=108.11 Aligned_cols=277 Identities=16% Similarity=0.108 Sum_probs=179.4
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc-
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG- 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~- 220 (456)
..++++.+|+|++. ++-+++..| -......+.+|+.+|. -|+...-.+......++..|+.+.-|..
T Consensus 184 hkelE~l~A~f~g~-------e~a~vF~mG-f~TNs~~~p~l~~~gs----LIiSDelNHaSi~~GaRLSgAtiRVfkHN 251 (519)
T KOG1357|consen 184 HKELEELVARFLGV-------EDAIVFSMG-FATNSMNIPSLLGKGS----LIISDELNHASLITGARLSGATTRVFRHN 251 (519)
T ss_pred HHHHHHHHHHhcCC-------cceEEEecc-ccccccCcceeecCCc----ceeeccccchheeccccccCceEEEEecC
Confidence 47888999999975 568888888 3555667778888988 8999999999999999999988876664
Q ss_pred Ccccccc-------------CCC--eE-EEEcCCCCCCccc--chH---HhhhcCcEEEeeecCCC----CCCCC---C-
Q 012785 221 DAKRFNK-------------DGP--YI-ELVTSPNNPDGSV--RQS---VVNRSGGILVHDLAYYW----PQYTS---I- 271 (456)
Q Consensus 221 d~~~l~~-------------~~~--~~-i~v~~P~NPtG~~--~~~---l~~~~~~~iI~De~y~~----~~~~~---~- 271 (456)
|..++++ +++ ++ +++..--.--|.+ +++ +.+++..+++.||++.. +.-.+ +
T Consensus 252 dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~ 331 (519)
T KOG1357|consen 252 DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYF 331 (519)
T ss_pred CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeecc
Confidence 3333322 111 23 3333332233333 333 67889999999999983 11111 1
Q ss_pred -CCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhh---ccCcCChHHHHHHHHHHHhhhCCCCCCCCcch
Q 012785 272 -TYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIEL---NTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDE 347 (456)
Q Consensus 272 -~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~---~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~ 347 (456)
.+..+-+|++++|+|++|..| ||+.++ +++++.++..... .+.-.+++.|.. ...++.+... ...
T Consensus 332 g~d~~dvDImMGtftKSfga~G---Gyiags-k~lid~lrt~s~~~~yat~~sppvaqq~-~ssl~~i~G~------dgt 400 (519)
T KOG1357|consen 332 GVDPEDVDIMMGTFTKSFGAAG---GYIAGS-KELIDYLRTPSPSALYATSLSPPVAQQI-LTSVKHIMGE------DGT 400 (519)
T ss_pred CCCchhheeecceehhhccccc---ceecCc-HHHHhhhccCCCceeecccCChHHHHHH-HHHHHhhcCC------Ccc
Confidence 244567899999999999887 999996 9999887765332 233344555554 3444444332 125
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCC
Q 012785 348 CFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFG 427 (456)
Q Consensus 348 ~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg 427 (456)
+.-++..++++++..+++..|+..+.+......... .-+.+-.+.-...+.+.+.+++|.++-+ .|.
T Consensus 401 ~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~~dSpV------------vplll~~~~k~~~f~r~~l~~nigvVvv-gfP 467 (519)
T KOG1357|consen 401 NRGRQKIERLAENSRYFRWELQKMGFIVYGNNDSPV------------VPLLLYGPAKIVAFSREMLERNIGVVVV-GFP 467 (519)
T ss_pred cHHHHHHHHHHhhhHHHHHhhhcCcEEEecCCCCCc------------ceeeecCcccccHHHHHHHhcCceEEEE-eCC
Confidence 677788889999999999998876643222111110 0133333333445566666777766543 243
Q ss_pred C---CCCeEEEEecC--ChhHHHHHHHHHHhh
Q 012785 428 F---SPKYVRISMLD--RDENYNLFVQRLSKI 454 (456)
Q Consensus 428 ~---~~~~iRis~~~--~~e~i~~~l~~L~~~ 454 (456)
. -+...|++.+. +.|+++.+++.+.++
T Consensus 468 atpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~ 499 (519)
T KOG1357|consen 468 ATPLLESRARFCLSASHTKEDLDRALEVIDRV 499 (519)
T ss_pred CchHHHhHHHhhhcccccHHHHHHHHHHHhhh
Confidence 2 35678888875 889999998877653
No 343
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.11 E-value=1.4e-07 Score=93.41 Aligned_cols=251 Identities=17% Similarity=0.156 Sum_probs=148.6
Q ss_pred EccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhh----------hhcCCeEeeeccCcc-------cccc---
Q 012785 168 VGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSIT----------DCVKSRLYKWAGDAK-------RFNK--- 227 (456)
Q Consensus 168 ~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~----------~~~g~~~~~~~~d~~-------~l~~--- 227 (456)
-.-++++|...++.+|++||| +|+..++...++...- .....+.+.+++|.+ .+++
T Consensus 91 qp~SGs~An~av~~aLl~pGD----~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~ 166 (399)
T PF00464_consen 91 QPHSGSQANLAVYMALLKPGD----TIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAK 166 (399)
T ss_dssp --SSHHHHHHHHHHHHT-TT-----EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHH
T ss_pred ecCCchHHHHHHHHHHHhhcC----cEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHh
Confidence 355666899999999999999 9999998876654321 112345566666532 2222
Q ss_pred -CCCeEEEEcCCCCCCcccch---HHhhhcCcEEEeeecCCC------CCCCCCCCCCCCcEEEecCccccCCCCceEEE
Q 012785 228 -DGPYIELVTSPNNPDGSVRQ---SVVNRSGGILVHDLAYYW------PQYTSITYPADHDLMLFTVSKSTGHAGTRIGW 297 (456)
Q Consensus 228 -~~~~~i~v~~P~NPtG~~~~---~l~~~~~~~iI~De~y~~------~~~~~~~~~~~~~i~i~S~SK~~g~~G~RiG~ 297 (456)
.+|++|++..-..|-=.-+. ++|++.|.+++.|-++.- ....|++ .-+|+.+|..|+| +|=|-|.
T Consensus 167 ~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~---~ADvvt~sThKtl--~GPrggi 241 (399)
T PF00464_consen 167 EHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFP---YADVVTGSTHKTL--RGPRGGI 241 (399)
T ss_dssp HH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCC---TSSEEEEESSGGG---SSS-EE
T ss_pred hcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccc---cceEEEeeccccc--cccCceE
Confidence 38899988554444333333 489999999999999862 2223342 2469999999997 6667899
Q ss_pred EEEe-------------CHHHHHHHHHHHhhccCcCChHHHHHHH-HHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHH
Q 012785 298 ALVK-------------DMEVAKKMTKYIELNTIGVSKDSQLRAA-KVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQ 363 (456)
Q Consensus 298 l~~~-------------~~~~~~~l~~~~~~~~~~~s~~~q~~a~-~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 363 (456)
++++ ++++.+++.+.......+.+.....++. ..|.... ...++...+++.++.+.
T Consensus 242 I~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~----------~~~fk~Ya~qVv~NAk~ 311 (399)
T PF00464_consen 242 ILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEAL----------SPEFKEYAKQVVKNAKA 311 (399)
T ss_dssp EEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHT----------SHHHHHHHHHHHHHHHH
T ss_pred EEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhccc----------CHHHHHHHHHHHHHHHH
Confidence 9986 4899999988865444444444444333 2233111 23456777888899999
Q ss_pred HHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc---cHHHHHHHHHhCCEEeec----CCCCCCCCCeEEEE
Q 012785 364 LRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ---EIEDCESFLKGNKILTRS----GKHFGFSPKYVRIS 436 (456)
Q Consensus 364 l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~~l~~~gI~v~p----g~~fg~~~~~iRis 436 (456)
|.+.|.+.+ +.+.. |+ .+...+|+++.. +...+.+.|++.||.+.. +..=...+..|||+
T Consensus 312 La~~L~~~G-~~v~~--gg----------Td~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlG 378 (399)
T PF00464_consen 312 LAEALQERG-FKVVT--GG----------TDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLG 378 (399)
T ss_dssp HHHHHHHTT--EEGG--GS-----------SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEE
T ss_pred HHHHHhhCC-cEEEE--CC----------CCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEEC
Confidence 999999876 44432 11 122358889853 567899999999999864 32111135689999
Q ss_pred ec------CChhHHHHHHHH
Q 012785 437 ML------DRDENYNLFVQR 450 (456)
Q Consensus 437 ~~------~~~e~i~~~l~~ 450 (456)
.. ..+++++++.+.
T Consensus 379 T~~lT~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 379 TPALTRRGMKEEDMKEIAEL 398 (399)
T ss_dssp SHHHHHTT--HHHHHHHHHH
T ss_pred CHHHHhCCCCHHHHHHHHhh
Confidence 54 267777776554
No 344
>PLN02271 serine hydroxymethyltransferase
Probab=99.09 E-value=1.3e-07 Score=96.31 Aligned_cols=261 Identities=15% Similarity=0.104 Sum_probs=163.1
Q ss_pred eEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhh---------hhcCC--eEeeecc-------Cccccc
Q 012785 165 HIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSIT---------DCVKS--RLYKWAG-------DAKRFN 226 (456)
Q Consensus 165 ~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~---------~~~g~--~~~~~~~-------d~~~l~ 226 (456)
+|-.- +++.|..+++.+|++||| +|+..+..+.++.... ...|. +.+++.. |.+.++
T Consensus 217 NVQp~-SGs~AN~aV~~ALl~PGD----~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~le 291 (586)
T PLN02271 217 NVQPY-SCTSANFAVYTGLLLPGD----RIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLE 291 (586)
T ss_pred ceeec-cHHHHHHHHHHHhcCCCC----EEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHH
Confidence 55555 455888889999999999 9999988887765532 22343 3334444 334443
Q ss_pred c----CCCeEEEEcCCCCCCcccch---HHhhhcCcEEEeeecCCCCCC-CC-CCC-CCCCcEEEecCccccCCCCceEE
Q 012785 227 K----DGPYIELVTSPNNPDGSVRQ---SVVNRSGGILVHDLAYYWPQY-TS-ITY-PADHDLMLFTVSKSTGHAGTRIG 296 (456)
Q Consensus 227 ~----~~~~~i~v~~P~NPtG~~~~---~l~~~~~~~iI~De~y~~~~~-~~-~~~-~~~~~i~i~S~SK~~g~~G~RiG 296 (456)
+ .++++|++..-.||.-.-+. ++|+++|+++++|.++.-.-. .. .+. ...-+++.+|..|++ .|=|-|
T Consensus 292 k~a~~~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtL--rGPrGG 369 (586)
T PLN02271 292 EKALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSL--RGPRGG 369 (586)
T ss_pred HHhhhcCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccC--CCCCce
Confidence 3 37899998766788444444 489999999999999873111 00 111 123579999999987 334458
Q ss_pred EEEEeCH-------------------HHHHHHHHHHhhccCcCChHHHH-HHHHHHHhhhCCCCCCCCcchhHHHHHHHH
Q 012785 297 WALVKDM-------------------EVAKKMTKYIELNTIGVSKDSQL-RAAKVLKVVSDSCKPSGSEDECFFEFTNHQ 356 (456)
Q Consensus 297 ~l~~~~~-------------------~~~~~l~~~~~~~~~~~s~~~q~-~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~ 356 (456)
.++..+. ++.+++.........+.+..... +.+..++.... .+ ++...++
T Consensus 370 ~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~---------~e-fk~Ya~Q 439 (586)
T PLN02271 370 IIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVAT---------PE-YKAYMQQ 439 (586)
T ss_pred EEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhC---------hH-HHHHHHH
Confidence 8887521 35555555443222233333332 22233332111 23 3567778
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc---cHHHHHHHHHhCCEEeecCCCCC----CC
Q 012785 357 MSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ---EIEDCESFLKGNKILTRSGKHFG----FS 429 (456)
Q Consensus 357 ~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~~l~~~gI~v~pg~~fg----~~ 429 (456)
+.++.+.|.+.|.+.+ +.+.. |+ .+...+|+++.. +...+.+.|.+.||.+..-..++ ..
T Consensus 440 Vv~NAkaLA~~L~~~G-~~vv~--gg----------TdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~ 506 (586)
T PLN02271 440 VKKNAQALASALLRRK-CRLVT--GG----------TDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTIS 506 (586)
T ss_pred HHHHHHHHHHHHHHCC-CeEee--CC----------CCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCC
Confidence 8889999999998876 44332 21 112257888853 57889999999999985433332 14
Q ss_pred CCeEEEEec------CChhHHHHHHHHHHhhh
Q 012785 430 PKYVRISML------DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 430 ~~~iRis~~------~~~e~i~~~l~~L~~~l 455 (456)
++.|||... ..++++++..+.|.+++
T Consensus 507 psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~ 538 (586)
T PLN02271 507 PGGVRIGTPAMTSRGCLESDFETIADFLLRAA 538 (586)
T ss_pred CCcccccCHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 678999953 26788888877777664
No 345
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.09 E-value=9.4e-08 Score=94.85 Aligned_cols=258 Identities=14% Similarity=0.092 Sum_probs=160.9
Q ss_pred eEEEccCHHHHHHHHHHHhc-CCCCCCCcEEEEeCCCCCCh-h-hhhhhcCC-eEeeec------cCccccccCCCeEEE
Q 012785 165 HIVVGTGSTQLFQAALYALS-SQDASEPISVVSAAPYYSSY-P-SITDCVKS-RLYKWA------GDAKRFNKDGPYIEL 234 (456)
Q Consensus 165 ~I~~t~G~~~al~~~~~~l~-~~gd~~~~~Vlv~~P~y~~~-~-~~~~~~g~-~~~~~~------~d~~~l~~~~~~~i~ 234 (456)
-++++.|++.++++++..++ ++|+ +|++.. .|... . .+++..|+ ++..+. .|.+.++..+ .++
T Consensus 60 v~~l~GsGT~a~Eaa~~nl~~~~g~----~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~~~--~v~ 132 (374)
T TIGR01365 60 IGIVPASDTGAVEMALWSMLGCRGV----DVLAWE-SFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDFKN--DVV 132 (374)
T ss_pred EEEECCchHHHHHHHHHHcCCCCCC----eEEEEC-HHHHHHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCCCC--CEE
Confidence 36679999999999999998 4788 888865 55544 4 77888888 344332 2444554322 233
Q ss_pred EcCCCCCCcccch--HHhhh-cCcEEEeeecCCCCCCCCCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHH
Q 012785 235 VTSPNNPDGSVRQ--SVVNR-SGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTK 311 (456)
Q Consensus 235 v~~P~NPtG~~~~--~l~~~-~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~ 311 (456)
++..-=.||+..+ +++++ ++.++|+|-+=.-. -.++. ..+-++++.|--|.++.|+ -+++++++ ++..+++..
T Consensus 133 ~vhnETSTGv~npv~~i~~~~~~~lliVDavSs~g-~~~l~-~d~iDv~~tgsQK~L~~pp-Gls~v~vs-~~Al~~~~~ 208 (374)
T TIGR01365 133 FTWNGTTSGVRVPNGDFIPADREGLTICDATSAAF-AQDLD-YHKLDVVTFSWQKVLGGEG-AHGMLILS-PRAVARLES 208 (374)
T ss_pred EecCCCchheeccccccccccCCCcEEEEccchhc-CCCCC-hhHCcEEEEechhccCCCC-ceEEEEEC-HHHHHHHhh
Confidence 3332234577766 35554 68999999865421 12221 1236799999999997554 26778886 766666542
Q ss_pred H----------------------H-hhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 012785 312 Y----------------------I-ELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAV 368 (456)
Q Consensus 312 ~----------------------~-~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L 368 (456)
. . ..+...++....+++..+|+.+.+. .-++...++.+++.+.+++.+
T Consensus 209 ~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~e---------gGle~~~~Rh~~~a~~l~~~l 279 (374)
T TIGR01365 209 YTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESI---------GGLKPLIARADDNLAVLEAFV 279 (374)
T ss_pred cCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHc---------cCHHHHHHHHHHHHHHHHHHH
Confidence 1 0 1122233334444445555433221 137788899999999999999
Q ss_pred HhcCCccccCCCCcccccccccCCCCCceEEeecCc--------c-----HHHHHHHHHhCCEEeecCCCCCCCCCeEEE
Q 012785 369 QKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--------E-----IEDCESFLKGNKILTRSGKHFGFSPKYVRI 435 (456)
Q Consensus 369 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--------~-----~~~~~~~l~~~gI~v~pg~~fg~~~~~iRi 435 (456)
++++.+.+....... .+. .-..+.+++ + .+.+.+.++++||.+.+|..-- .+..|||
T Consensus 280 ~~lg~l~~~~~~~~~--------rS~-tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~-~~~~fRI 349 (374)
T TIGR01365 280 AKNNWIHFLAETPEI--------RSN-TSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRD-APSGLRI 349 (374)
T ss_pred HHCCCcccCCCChhh--------cCC-CeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEecccccc-CCCceEE
Confidence 998744433321111 111 123334422 2 4678889999999999876432 3588999
Q ss_pred EecC--ChhHHHHHHHHHH
Q 012785 436 SMLD--RDENYNLFVQRLS 452 (456)
Q Consensus 436 s~~~--~~e~i~~~l~~L~ 452 (456)
+--. +.++++.+++.|.
T Consensus 350 g~~G~i~~~di~~l~~~l~ 368 (374)
T TIGR01365 350 WCGATVEKSDLECLCPWLD 368 (374)
T ss_pred ecCCcCCHHHHHHHHHHHH
Confidence 9543 8999999998875
No 346
>PLN02452 phosphoserine transaminase
Probab=99.08 E-value=3.6e-08 Score=97.70 Aligned_cols=261 Identities=8% Similarity=-0.020 Sum_probs=165.9
Q ss_pred eEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCC--hhhhhhhcCCeEeee---------ccCccccccC-CCeE
Q 012785 165 HIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSS--YPSITDCVKSRLYKW---------AGDAKRFNKD-GPYI 232 (456)
Q Consensus 165 ~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~--~~~~~~~~g~~~~~~---------~~d~~~l~~~-~~~~ 232 (456)
-+++..|++.+++.++..|..+|+ ++++..-++.+ ....++.+|...+-. ..|.+.++.. +.+.
T Consensus 73 v~~l~Gsgt~~~ea~~~nl~~~~~----~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (365)
T PLN02452 73 VLFLQGGASTQFAAIPLNLCKPGD----KADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWELTPDAKF 148 (365)
T ss_pred EEEEeCccHHHHHHHHHhcCCCCC----eEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCCCCCCcE
Confidence 456778999999999999999988 77777655554 345666677543322 1233344332 3455
Q ss_pred EEEcCCCCCCcccchHHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHH
Q 012785 233 ELVTSPNNPDGSVRQSVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKY 312 (456)
Q Consensus 233 i~v~~P~NPtG~~~~~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~ 312 (456)
+.++.-.=.||+.+..+-+-.++++|+|-+..-.+ .++. ..+-.+...|.-|.+|.+| +|.++++ +++.+++...
T Consensus 149 v~~~hnETstGv~~~~~~~i~~~~lvVDa~Ss~g~-~pid-v~~~~v~~~saqK~lGP~G--l~~v~vr-~~~l~~~~~~ 223 (365)
T PLN02452 149 VHICANETIHGVEFKDYPDVGNVPLVADMSSNFLS-KPVD-VSKYGVIYAGAQKNVGPSG--VTIVIIR-KDLIGNARPI 223 (365)
T ss_pred EEECCCCCCCcEecCcccccCCCeEEEECCccccC-cccC-HHHcCEEEEecccccCCCC--eEEEEEc-HHHHhhcccC
Confidence 55544334668865543222248999998876322 2221 1122244579999999999 7889997 7777654321
Q ss_pred -------Hh-----hccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCC
Q 012785 313 -------IE-----LNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELP 380 (456)
Q Consensus 313 -------~~-----~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 380 (456)
.. .+...++....+++.++|+.+.+. .-++.+.++.+++.+++++.|++..++......
T Consensus 224 ~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~---------gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~ 294 (365)
T PLN02452 224 TPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQ---------GGLKAMEKRNIRKADLLYDAIDESNGFYVCPVE 294 (365)
T ss_pred CCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHc---------cCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCC
Confidence 10 011355666677777778765431 137788899999999999999986544111111
Q ss_pred CcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 381 SQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 381 g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
... . +..-+-+.+++ ..+.+.+.++++|+...+|..- -+.+|+|+-. +.|+++.+++.++++-
T Consensus 295 ~~~--------r-s~~~vsF~~~~~~~~~~f~~~~~~~g~~~~~G~r~---~gg~R~s~yna~~~~~v~~L~~~m~~f~ 361 (365)
T PLN02452 295 KSV--------R-SLMNVPFTLGGSELEAEFVKEAAKAGMVQLKGHRS---VGGMRASIYNAMPLAGVEKLVAFMKDFQ 361 (365)
T ss_pred hHH--------h-CCeEEEEEcCCchhHHHHHHHHHHCCCcccCCccc---cCceEEECcCCCCHHHHHHHHHHHHHHH
Confidence 000 0 11123444543 4677889999999999998754 2229999754 8999999999998863
No 347
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.04 E-value=6.4e-08 Score=106.26 Aligned_cols=270 Identities=11% Similarity=0.073 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhc-CCC--CCCCcEEEEeCCCCCChhhhh----hhcCCeEe
Q 012785 144 EFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALS-SQD--ASEPISVVSAAPYYSSYPSIT----DCVKSRLY 216 (456)
Q Consensus 144 ~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~-~~g--d~~~~~Vlv~~P~y~~~~~~~----~~~g~~~~ 216 (456)
++++.++++.+. +..++.+..+++.+.+.++.++. .++ + +|++++-.|+...... +..|++++
T Consensus 125 ~~Qt~la~LtG~------~~anaSl~d~aTAa~ea~~~a~~~~~~~~~----~vlv~~~~hP~~~~v~~t~a~~~G~ev~ 194 (954)
T PRK05367 125 NFQTMVADLTGL------EIANASLLDEATAAAEAMALAKRVSKSKSN----RFFVDDDVHPQTLDVLRTRAEPLGIEVV 194 (954)
T ss_pred HHHHHHHHHHCC------ChhhccccccHHHHHHHHHHhhhhccCCCC----EEEEcCccCHHHHHHHHHHHHhCCCEEE
Confidence 455556666654 45689999999999998887763 333 6 9999999999877653 55799988
Q ss_pred eeccCccccccCCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCccc----
Q 012785 217 KWAGDAKRFNKDGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKS---- 287 (456)
Q Consensus 217 ~~~~d~~~l~~~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~---- 287 (456)
.++.+.+ ++..++..+++.+| |-+|.+.+ ++|+++|+++++|-...-......+...+-+|+++|.-|.
T Consensus 195 ~~~~~~d-~~~~~~~~vlvq~p-~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~ 272 (954)
T PRK05367 195 VGDAAKA-LDHDDVFGVLLQYP-GTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPM 272 (954)
T ss_pred EecCccC-CCcccEEEEEEecC-CCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCC
Confidence 8776442 33334556667676 56899976 3678899999998644221111123445668999999996
Q ss_pred -cCCCCceEEEEEEeCHHHHHHHHHH-Hhh----------------------ccCcCChHH-HHHHHHHHHhhhCCCCCC
Q 012785 288 -TGHAGTRIGWALVKDMEVAKKMTKY-IEL----------------------NTIGVSKDS-QLRAAKVLKVVSDSCKPS 342 (456)
Q Consensus 288 -~g~~G~RiG~l~~~~~~~~~~l~~~-~~~----------------------~~~~~s~~~-q~~a~~~L~~~~~~~~~~ 342 (456)
||-|| .|++.+. +++...+... ... ..-+.|.+. ..++.+++..+--.+
T Consensus 273 g~GGP~--aGflavr-~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~--- 346 (954)
T PRK05367 273 GFGGPH--AAYFAVR-DAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVY--- 346 (954)
T ss_pred CCCCCC--EEEEEEC-HHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHH---
Confidence 66676 8999997 7666655211 000 001111111 111111111100000
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeec
Q 012785 343 GSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRS 422 (456)
Q Consensus 343 ~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~p 422 (456)
+...-++++.++...+..++.+.|+..+ +++..+ .+ |+ -+.++++.+.+++.+.|.++||.++.
T Consensus 347 --~g~~Gl~~Ia~~~~~la~~l~~~L~~~G-~~~~~~--~~---f~--------~~~~~~~~~~~~i~~~l~~~gi~~~~ 410 (954)
T PRK05367 347 --HGPEGLKAIARRVHRLAAILAAGLRALG-LEVVHD--SF---FD--------TLTVEVGGDAAAVLARALAAGINLRR 410 (954)
T ss_pred --HhhhhHHHHHHHHHHHHHHHHHHHHhcC-cccCCC--CC---CC--------eEEEeCCCCHHHHHHHHHHCCceecc
Confidence 0134567777888888888888887643 443321 11 11 23445544677899999999999843
Q ss_pred CCCCCCCCCeEEEEecC--ChhHHHHHHHHHH
Q 012785 423 GKHFGFSPKYVRISMLD--RDENYNLFVQRLS 452 (456)
Q Consensus 423 g~~fg~~~~~iRis~~~--~~e~i~~~l~~L~ 452 (456)
..++.+|+|+.- ++++++.+++.|.
T Consensus 411 -----~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 411 -----VDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred -----ccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 125689999864 8899999999986
No 348
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.03 E-value=9.7e-08 Score=104.54 Aligned_cols=272 Identities=12% Similarity=0.075 Sum_probs=166.9
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhc-CCC--CCCCcEEEEeCCCCCChhhhhh----hcCCeE
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALS-SQD--ASEPISVVSAAPYYSSYPSITD----CVKSRL 215 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~-~~g--d~~~~~Vlv~~P~y~~~~~~~~----~~g~~~ 215 (456)
.+++..|+++.+. +.+++.++.|++.+.++++.++. .+| + +|++++-.|+.+....+ ..|+++
T Consensus 151 ~~~Qt~ia~LtG~------~~anaSL~d~aTAaaea~~~a~~~~~g~~~----~VlVs~~~hP~~~~v~~t~a~~~GieV 220 (993)
T PLN02414 151 LNYQTMITDLTGL------PMSNASLLDEGTAAAEAMAMCNNILKGKKK----KFLIASNCHPQTIDVCQTRADGLGLEV 220 (993)
T ss_pred HHHHHHHHHHhCC------ChhhEeecCChHHHHHHHHHHHhcccCCCC----EEEEcCccCHhHHHHHHHhhhhcCCEE
Confidence 3566667777764 56799999999999998887763 333 4 89999999998876654 358888
Q ss_pred eeeccCccccccCCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCC--CCCCCCcEEEecCcccc
Q 012785 216 YKWAGDAKRFNKDGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSI--TYPADHDLMLFTVSKST 288 (456)
Q Consensus 216 ~~~~~d~~~l~~~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~--~~~~~~~i~i~S~SK~~ 288 (456)
+.++.+......+....+++.+|+ -+|.+.+ ++|+++|+++|+ -+.. .+..++ +...+-+|++++--|..
T Consensus 221 ~~v~~~~~~~~~~~v~~vlvq~P~-~~G~v~dv~~I~~~ah~~GaL~iV-aad~-lal~~l~~pge~GADi~vgsgqKwg 297 (993)
T PLN02414 221 VVADEKDFDYSSGDVCGVLVQYPA-TDGEVLDYAEFVKNAHANGVKVVM-ATDL-LALTMLKPPGEWGADIVVGSAQRFG 297 (993)
T ss_pred EEecchhhccccCceEEEEEecCC-CCeEEcCHHHHHHHHHHcCCEEEE-EECH-HHhcCCCCHhhccCcEEEECCCccc
Confidence 877764321222233344554553 3899977 378889999998 3322 122222 23345689999988865
Q ss_pred C---CCCceEEEEEEeCHHHHHHHHH-HHhh----------------------ccCcCChH-HHHHHHHHHHhhhCCCCC
Q 012785 289 G---HAGTRIGWALVKDMEVAKKMTK-YIEL----------------------NTIGVSKD-SQLRAAKVLKVVSDSCKP 341 (456)
Q Consensus 289 g---~~G~RiG~l~~~~~~~~~~l~~-~~~~----------------------~~~~~s~~-~q~~a~~~L~~~~~~~~~ 341 (456)
+ ..|=+.|++.+. +++...+-. .... ...+.+.+ +..++.+.+..+.-.+
T Consensus 298 ~P~G~GGP~aGflavr-~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~-- 374 (993)
T PLN02414 298 VPMGYGGPHAAFLATS-QEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY-- 374 (993)
T ss_pred cCCCCCCCCeeEEEEC-HHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHH--
Confidence 1 123348999997 666553320 1000 00122222 2222223232110000
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEee
Q 012785 342 SGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTR 421 (456)
Q Consensus 342 ~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~ 421 (456)
+...-++++.+++.++..++.+.|+..+ +++..+ .+ |+ -+.++++ +.+.+.+.|.++||.++
T Consensus 375 ---~g~~Gl~~Ia~ri~~la~~l~~~L~~~G-~~~~~~--~~---f~--------~vt~~~~-~~~~v~~~L~~~gI~l~ 436 (993)
T PLN02414 375 ---HGPEGLKTIAQRVHGLAGVFAAGLKKLG-FQVQSL--PF---FD--------TVKVKCS-DADAIADAAAKVGINLR 436 (993)
T ss_pred ---hccccHHHHHHHHHHHHHHHHHHHhhcC-CccCCC--CC---cC--------eEEEecC-CHHHHHHHHHHCCCeeE
Confidence 0123466777888888888888887754 444322 11 11 2344554 44778889999999776
Q ss_pred cCCCCCCCCCeEEEEecC--ChhHHHHHHHHHHh
Q 012785 422 SGKHFGFSPKYVRISMLD--RDENYNLFVQRLSK 453 (456)
Q Consensus 422 pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~ 453 (456)
.. ..+.+|+|+.- ++++|+.+++.|..
T Consensus 437 ~~-----~~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 437 VV-----DANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred Ee-----cCCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 52 25679999864 88999999999863
No 349
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.01 E-value=6.7e-10 Score=95.74 Aligned_cols=103 Identities=16% Similarity=0.373 Sum_probs=72.7
Q ss_pred cCCCCeEEecCCCCCCCch---hHhhhcccc-----cccccCccccccccCCCCcccCCCHHHHHHHHHHHHH-hc--Cc
Q 012785 91 DGGERIINVDHGDPTMYEK---YWQKVGDKT-----TIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKV-VG--NA 159 (456)
Q Consensus 91 ~~~~~~i~l~~g~p~~~~~---~~~~~~~~~-----~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~-~g--~~ 159 (456)
.++.++|+|+..++.+... .|+.+.... ..+.........|++..| .++||+++|+|+.+ +| ..
T Consensus 40 ~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~a~Y~~~~G-----~~~lR~AiA~~l~~~~g~~v~ 114 (153)
T PLN02994 40 HNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDIALFQDYHG-----LANFRKAIANFMAEARGGRVK 114 (153)
T ss_pred cCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHHhcCCCCCC-----cHHHHHHHHHHHHHHhCCCCc
Confidence 4567899999988754322 222221000 000101111245888899 59999999999955 56 34
Q ss_pred cCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCC
Q 012785 160 ITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSS 203 (456)
Q Consensus 160 ~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~ 203 (456)
+ ++++|++|+|++++++.++.+|+++|| .|++++|+|+.
T Consensus 115 ~-~pd~Ivvt~Ga~~al~~l~~~l~dpGD----~VlVp~P~Y~~ 153 (153)
T PLN02994 115 F-DADMIVLSAGATAANEIIMFCIADPGD----AFLVPTPYYAA 153 (153)
T ss_pred c-chhheEEcCCHHHHHHHHHHHHcCCCC----EEEEeCCCCCC
Confidence 4 457999999999999999999999999 99999999974
No 350
>PRK15029 arginine decarboxylase; Provisional
Probab=98.98 E-value=1.1e-07 Score=101.38 Aligned_cols=159 Identities=14% Similarity=0.120 Sum_probs=111.2
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc-
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG- 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~- 220 (456)
-.+..+..|+.++. .+-.+++||+|.++.+++.+++.+|| +|+++.-++-.....+...|++++.+..
T Consensus 207 I~eAq~~aA~~fgA-------~~t~FlvNGST~gn~a~i~a~~~~gd----~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~ 275 (755)
T PRK15029 207 FGESEKYAARVFGA-------DRSWSVVVGTSGSNRTIMQACMTDND----VVVVDRNCHKSIEQGLILTGAKPVYMVPS 275 (755)
T ss_pred HHHHHHHHHHHhCC-------CcEEEEeCChhHHHHHHHHHhcCCCC----EEEeecccHHHHHHHHHHcCCeEEEeccc
Confidence 35666777777763 46788999999999999999999999 9999999999999999999999875432
Q ss_pred ----------C-----cccccc-------------CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCC--
Q 012785 221 ----------D-----AKRFNK-------------DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYW-- 265 (456)
Q Consensus 221 ----------d-----~~~l~~-------------~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~-- 265 (456)
+ .+.++. .+++++++++|+. .|.+.+ ++|+++++++++||||+.
T Consensus 276 ~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~ 354 (755)
T PRK15029 276 RNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_pred ccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECcccccc
Confidence 1 222211 1234888888765 488766 478899999999999984
Q ss_pred ---CCCC---CCCC---C-CCCc-EEEecCccccCCCCceEE-EEEEeCH--HH-HHHHHHHHh
Q 012785 266 ---PQYT---SITY---P-ADHD-LMLFTVSKSTGHAGTRIG-WALVKDM--EV-AKKMTKYIE 314 (456)
Q Consensus 266 ---~~~~---~~~~---~-~~~~-i~i~S~SK~~g~~G~RiG-~l~~~~~--~~-~~~l~~~~~ 314 (456)
+.++ ++.. . .+-+ +++.|..|++ |++.-| ++.+.+. .+ .++++....
T Consensus 355 ~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv~~~~~~id~~r~~~~l~ 416 (755)
T PRK15029 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYM 416 (755)
T ss_pred ccCccccccccccccccccCCCceEEEEchhhcc--cchhhhhhheeCCCccccCHHHHHHHHH
Confidence 1121 1200 1 2334 8999999986 556554 5555322 12 245655544
No 351
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.96 E-value=3.6e-07 Score=100.51 Aligned_cols=325 Identities=10% Similarity=0.056 Sum_probs=179.8
Q ss_pred CCeEEecCCCCCCCchhHhhhcccccccccCccccccccC---CCCcccCCCHHHHHHHHHHHH-HhcCccCCCceEE-E
Q 012785 94 ERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSD---VRNLCWFLEPEFAKEVVRLHK-VVGNAITENHHIV-V 168 (456)
Q Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~---~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~I~-~ 168 (456)
..+|.||.....+++. ...... ..+++...+-|.+ .+| ..++...+.+|+. ..|. +++. .
T Consensus 499 ~~~i~lGsct~~~~p~--~~~~~~---~~~~f~~~hP~qp~e~~qG-----~l~~i~e~q~~l~eltG~-----d~~sl~ 563 (954)
T PRK05367 499 RSMIPLGSCTMKLNAA--AEMIPI---TWPEFANLHPFAPAEQAAG-----YRELIDQLEAWLAEITGY-----DAVSLQ 563 (954)
T ss_pred cceeeCCcCCCcCCHH--HHHHHH---hCccccccCCCChHHHHHH-----HHHHHHHHHHHHHHHHCC-----CCEEEC
Confidence 4578888866555533 222111 2233422222333 123 2344444555552 2342 2344 4
Q ss_pred ccCHHHHHHHHHHHhc----CCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc------ccc----c--CCCeE
Q 012785 169 GTGSTQLFQAALYALS----SQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK------RFN----K--DGPYI 232 (456)
Q Consensus 169 t~G~~~al~~~~~~l~----~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~------~l~----~--~~~~~ 232 (456)
.+|++++....+.++. .+|+..+.+|++++-.|......+...|++++.++.|.+ .++ . .++.+
T Consensus 564 ~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~~~la~ 643 (954)
T PRK05367 564 PNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKAEEHADNLAA 643 (954)
T ss_pred ccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHHhccCCCeEE
Confidence 5566666644443333 455532337999999998888888999999988776542 332 2 14577
Q ss_pred EEEcCCCCCCccc--ch---HHhhhcCcEEEeeecCCCC--CCCCCCCCCCCcEEEecCccccCCC----CceEEEEEEe
Q 012785 233 ELVTSPNNPDGSV--RQ---SVVNRSGGILVHDLAYYWP--QYTSITYPADHDLMLFTVSKSTGHA----GTRIGWALVK 301 (456)
Q Consensus 233 i~v~~P~NPtG~~--~~---~l~~~~~~~iI~De~y~~~--~~~~~~~~~~~~i~i~S~SK~~g~~----G~RiG~l~~~ 301 (456)
|++++|++-.+.. +. ++|+++|+++++|.++... .+. .+...+-+++.+|..|.|+.| |=-+|.+.+.
T Consensus 644 V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~-~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr 722 (954)
T PRK05367 644 IMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLA-RPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVK 722 (954)
T ss_pred EEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCC-ChhhcCCCEEEecCcccCCCCcCCCCCceEEEeec
Confidence 8888888753322 23 3678899999999998632 111 112345689999999987422 2227888886
Q ss_pred CHHHHHHHHHHH-----h---hccCcCChHHHHH----HHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 012785 302 DMEVAKKMTKYI-----E---LNTIGVSKDSQLR----AAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQ 369 (456)
Q Consensus 302 ~~~~~~~l~~~~-----~---~~~~~~s~~~q~~----a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~ 369 (456)
+++...+-... . ..+...++..|.. +...+.. -| .+-+++..+..-.+.+++.+.|+
T Consensus 723 -~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~--~G--------~~Glr~~a~~~~~~A~Yl~~~L~ 791 (954)
T PRK05367 723 -AHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRM--MG--------AEGLRQATEVAILNANYIAKRLK 791 (954)
T ss_pred -ccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHH--HC--------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 54443332110 0 0122223332222 1222221 12 44555555555578888888887
Q ss_pred hcCCccccCCCCcccccccccCCCCCceEEeecC----ccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC--ChhH
Q 012785 370 KSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE----QEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD--RDEN 443 (456)
Q Consensus 370 ~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~----~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~--~~e~ 443 (456)
+.-.+.+..+.+... ....+-+..++ ...+++.+.|.++|+.... ..|. ..+.+||+.+- ++++
T Consensus 792 ~~~~~~~~~~~~~~~--------~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t-~~~p-v~~~l~i~ptE~~s~~e 861 (954)
T PRK05367 792 DHYPVLYTGANGRVA--------HECILDLRPLKESTGITVDDIAKRLIDYGFHAPT-MSFP-VAGTLMVEPTESESKAE 861 (954)
T ss_pred hhcCccccCCCCCcc--------cceEEEeecccccCCCCHHHHHHHHHHCCCeEee-cCCc-cCCEEEEEeeecCCHHH
Confidence 642222222222110 01112222222 2457788889999998765 3354 36788888763 8899
Q ss_pred HHHHHHHHHhhh
Q 012785 444 YNLFVQRLSKIL 455 (456)
Q Consensus 444 i~~~l~~L~~~l 455 (456)
++.+++.|+++.
T Consensus 862 lDr~~~al~~i~ 873 (954)
T PRK05367 862 LDRFCDAMIAIR 873 (954)
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 352
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.96 E-value=1.1e-06 Score=84.68 Aligned_cols=260 Identities=18% Similarity=0.153 Sum_probs=167.0
Q ss_pred eEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhh---hcC--CeEeeeccCcc-------cccc----C
Q 012785 165 HIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITD---CVK--SRLYKWAGDAK-------RFNK----D 228 (456)
Q Consensus 165 ~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~---~~g--~~~~~~~~d~~-------~l~~----~ 228 (456)
+|-..+|+ +|...++.+|.+||| +|+-.+-...++..-.. ..| .+.+.+++|.+ .+++ .
T Consensus 91 nVQPhSGs-~AN~av~~All~pGD----timgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~ 165 (413)
T COG0112 91 NVQPHSGS-QANQAVYLALLQPGD----TIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEV 165 (413)
T ss_pred ccCCCCch-HHHHHHHHHHcCCCC----eEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHh
Confidence 56666776 777888899999999 99988887777654331 122 24456666543 2222 3
Q ss_pred CCeEEEEcCCCCCCcccch---HHhhhcCcEEEeeecCCC------CCCCCCCCCCCCcEEEecCccccCCCCceEEEEE
Q 012785 229 GPYIELVTSPNNPDGSVRQ---SVVNRSGGILVHDLAYYW------PQYTSITYPADHDLMLFTVSKSTGHAGTRIGWAL 299 (456)
Q Consensus 229 ~~~~i~v~~P~NPtG~~~~---~l~~~~~~~iI~De~y~~------~~~~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~ 299 (456)
+||+|+..--..|-=..+. ++|++-|.+++.|.++.- ....|++ .-+|+.+|-.|+| +|=|-|.++
T Consensus 166 kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~---~AdvVTtTTHKTl--rGPrGG~Il 240 (413)
T COG0112 166 KPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLP---HADVVTTTTHKTL--RGPRGGIIL 240 (413)
T ss_pred CCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCC---ccceEeCCcccCC--CCCCceEEE
Confidence 8899887433333222222 489999999999998862 2223332 2579999999987 677889999
Q ss_pred EeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCC
Q 012785 300 VKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPEL 379 (456)
Q Consensus 300 ~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 379 (456)
+.++++.+++.+.......|.+.+- .+|+.+..-- +- .+..++...+++.++.+.|.+.|.+.+ +.+..
T Consensus 241 ~~~eel~kkin~aVFPg~qggpl~H-viAakaVa~~-Ea-------l~p~fk~Ya~qVv~NAkaLAe~l~~~G-~~vvs- 309 (413)
T COG0112 241 TNDEELAKKINSAVFPGLQGGPLMH-VIAAKAVAFK-EA-------LEPEFKEYAKQVVKNAKALAEALKERG-FKVVS- 309 (413)
T ss_pred eccHHHHHHhhhhcCCccCCChHHH-HHHHHHHHHH-HH-------cChhHHHHHHHHHHHHHHHHHHHHHcC-CeEec-
Confidence 9767999999887654444444333 3322222210 11 122345566777788899999998866 44432
Q ss_pred CCcccccccccCCCCCceEEeecCc---cHHHHHHHHHhCCEEeecC-CCCCC----CCCeEEEEec------CChhHHH
Q 012785 380 PSQFCTFLGRAFEPQPAFAWLKCEQ---EIEDCESFLKGNKILTRSG-KHFGF----SPKYVRISML------DRDENYN 445 (456)
Q Consensus 380 ~g~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~~l~~~gI~v~pg-~~fg~----~~~~iRis~~------~~~e~i~ 445 (456)
|+- +..-+.+++.. +.+.+...|.+.||.+.-- -.|.. .+..|||... -.+++++
T Consensus 310 -GgT----------dnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~ 378 (413)
T COG0112 310 -GGT----------DNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEME 378 (413)
T ss_pred -CCc----------cceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHH
Confidence 211 11135667752 5788999999999998532 22321 3567999843 2678888
Q ss_pred HHHHHHHhhhC
Q 012785 446 LFVQRLSKILS 456 (456)
Q Consensus 446 ~~l~~L~~~l~ 456 (456)
+..+.|.++++
T Consensus 379 ~Ia~~I~~vl~ 389 (413)
T COG0112 379 EIADLIADVLD 389 (413)
T ss_pred HHHHHHHHHHh
Confidence 88888887763
No 353
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=98.93 E-value=1.4e-08 Score=100.93 Aligned_cols=159 Identities=14% Similarity=0.072 Sum_probs=107.7
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc-
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG- 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~- 220 (456)
-.+.++.+|+.++. .+-.++++|++.++.+++.+++.+|| +|+++.-++-.....+...|++++.++.
T Consensus 68 I~eAe~~aA~~fGA-------d~t~flvnGsT~g~~a~i~a~~~~gd----~VLv~RN~HkSv~~alil~ga~Pvyi~p~ 136 (417)
T PF01276_consen 68 IKEAEELAARAFGA-------DKTFFLVNGSTSGNQAMIMALCRPGD----KVLVDRNCHKSVYNALILSGAIPVYIPPE 136 (417)
T ss_dssp HHHHHHHHHHHHTE-------SEEEEESSHHHHHHHHHHHHHTTTTC----EEEEETT--HHHHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHHHHhcCC-------CeEEEEecCchHHHHHHHHHhcCCCC----EEEEcCCcHHHHHHHHHHcCCeEEEecCC
Confidence 46777778888874 46788999999999999999999999 9999999999999999999999875432
Q ss_pred ----------Cc-----ccccc-----CCC---eEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCC-CCCCCC
Q 012785 221 ----------DA-----KRFNK-----DGP---YIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYW-PQYTSI 271 (456)
Q Consensus 221 ----------d~-----~~l~~-----~~~---~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~-~~~~~~ 271 (456)
+. +.++. ... +++++++|+. .|.+.+ ++|+++++.|++||||.. ..|.++
T Consensus 137 ~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~l 215 (417)
T PF01276_consen 137 DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPL 215 (417)
T ss_dssp E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGG
T ss_pred ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEccccccccCCCC
Confidence 22 22211 122 4488888765 488876 478899999999999984 122222
Q ss_pred C-----CCC-----CCcEEEecCccccCCCCce-EEEEEEeCHH--HHHHHHHHHh
Q 012785 272 T-----YPA-----DHDLMLFTVSKSTGHAGTR-IGWALVKDME--VAKKMTKYIE 314 (456)
Q Consensus 272 ~-----~~~-----~~~i~i~S~SK~~g~~G~R-iG~l~~~~~~--~~~~l~~~~~ 314 (456)
+ ... ..++++.|..|++ +++. -+++.+.+.. -.+++++...
T Consensus 216 p~~a~~~gad~~~~~~~~vvqS~HKtL--~altQts~lh~~~~~~v~~~~~~~~l~ 269 (417)
T PF01276_consen 216 PRSALALGADRPNDPGIIVVQSTHKTL--PALTQTSMLHVKGDRIVDHERVNEALS 269 (417)
T ss_dssp GTTCSSTTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEEETCCCTTHHHHHHHHH
T ss_pred ccchhhccCccccccceeeeechhhcc--cccccceEEEecCCCcccHHHHHHHHH
Confidence 2 111 1359999999986 5554 5677776443 2466666544
No 354
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=98.90 E-value=2.6e-06 Score=79.33 Aligned_cols=263 Identities=15% Similarity=0.114 Sum_probs=168.3
Q ss_pred eEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCC-CCCC-hhhhhhhcCCeEeeeccCc----------cccccCCCeE
Q 012785 165 HIVVGTGSTQLFQAALYALSSQDASEPISVVSAAP-YYSS-YPSITDCVKSRLYKWAGDA----------KRFNKDGPYI 232 (456)
Q Consensus 165 ~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P-~y~~-~~~~~~~~g~~~~~~~~d~----------~~l~~~~~~~ 232 (456)
-.++...++.+.+.++.-++.||| +|++-.- .|.. ...+.+..|+++..++.|. +++..+++++
T Consensus 70 tf~isgsGh~g~E~al~N~lePgd----~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~ 145 (385)
T KOG2862|consen 70 TFVISGSGHSGWEAALVNLLEPGD----NVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKA 145 (385)
T ss_pred eEEEecCCcchHHHHHHhhcCCCC----eEEEEEechHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCce
Confidence 455555566889999999999999 7776654 4443 5568888999988776653 2334468899
Q ss_pred EEEcCCCCCCcccch------HHhhhcCcEEEeeecCCCCCCCCC-CCCCCCcEEEecCccccCC-CCceEEEEEEeCHH
Q 012785 233 ELVTSPNNPDGSVRQ------SVVNRSGGILVHDLAYYWPQYTSI-TYPADHDLMLFTVSKSTGH-AGTRIGWALVKDME 304 (456)
Q Consensus 233 i~v~~P~NPtG~~~~------~l~~~~~~~iI~De~y~~~~~~~~-~~~~~~~i~i~S~SK~~g~-~G~RiG~l~~~~~~ 304 (456)
++++.-..-||+.-+ ++|++|+.++++|-+-+- +-+++ .+...-++....--|.+|. +|+-+ +..+ +.
T Consensus 146 vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSl-ggt~F~mDewgVDvaytgSQKaL~aP~GLsi--isfS-~k 221 (385)
T KOG2862|consen 146 VFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASL-GGTEFEMDEWGVDVAYTGSQKALGAPAGLSI--ISFS-DK 221 (385)
T ss_pred EEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhc-CCccceehhhcccEEEecchhhcCCCCCcce--eecC-HH
Confidence 999888788898876 489999999999987652 11222 2344556666666788864 46444 5554 66
Q ss_pred HHHHHHHHHhh-----------------------ccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHH
Q 012785 305 VAKKMTKYIEL-----------------------NTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRW 361 (456)
Q Consensus 305 ~~~~l~~~~~~-----------------------~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 361 (456)
..+++++.+.. ....+|....+..-++|..+. ++-+++..++.++..
T Consensus 222 a~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~----------eeGL~~~~~rH~e~s 291 (385)
T KOG2862|consen 222 ALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIA----------EEGLENSWRRHREMS 291 (385)
T ss_pred HHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHH
Confidence 66777665430 112344444444455554332 456778888899999
Q ss_pred HHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC
Q 012785 362 KQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD 439 (456)
Q Consensus 362 ~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~ 439 (456)
+.++..|++++.--+...+ ....+.---++.|. +.+++...+..++.....|..=...+.++||.+..
T Consensus 292 ~~l~~~l~~~GLq~fv~~e----------~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~g 361 (385)
T KOG2862|consen 292 KWLKLSLEALGLQLFVVDE----------ELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLG 361 (385)
T ss_pred HHHHHHHHHhCccceecCh----------hhccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEee
Confidence 9999999987531111100 00111122334443 67788877777644444333222357899999643
Q ss_pred ---ChhHHHHHHHHHHhhh
Q 012785 440 ---RDENYNLFVQRLSKIL 455 (456)
Q Consensus 440 ---~~e~i~~~l~~L~~~l 455 (456)
+.|.++..++.|+..+
T Consensus 362 cna~~e~i~~v~~ll~~al 380 (385)
T KOG2862|consen 362 CNANVEYIDNVVELLKLAL 380 (385)
T ss_pred ccCCcHHHHHHHHHHHHHH
Confidence 7788898888887654
No 355
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.86 E-value=1.1e-06 Score=92.78 Aligned_cols=158 Identities=9% Similarity=0.030 Sum_probs=105.9
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD 221 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d 221 (456)
..+..+.+|+.++. .+-.+++||++.++.+++.+++.+|| +|+++.-++-.....+.+.|++++.+..+
T Consensus 197 i~eAe~~aA~~fgA-------d~tyfvvNGTS~~n~av~~a~~~~Gd----~VLvdRN~HKSv~~aLilsga~PVYl~P~ 265 (713)
T PRK15399 197 HLEAEEYIARTFGA-------EQSYIVTNGTSTSNKIVGMYAAPAGS----TLLIDRNCHKSLAHLLMMSDVVPIWLKPT 265 (713)
T ss_pred HHHHHHHHHHHhCC-------CcEEEEeCChHHHHHHHHHHhcCCCC----EEEeecccHHHHHHHHHHcCCeeEEeccc
Confidence 35666667777763 45788999999999999999999999 99999999999999999999998754322
Q ss_pred -----------c-----ccccc--------CCCeEEEEcCCCCCCcccch--HHhhhcCcEE-EeeecCCC-CCCCC---
Q 012785 222 -----------A-----KRFNK--------DGPYIELVTSPNNPDGSVRQ--SVVNRSGGIL-VHDLAYYW-PQYTS--- 270 (456)
Q Consensus 222 -----------~-----~~l~~--------~~~~~i~v~~P~NPtG~~~~--~l~~~~~~~i-I~De~y~~-~~~~~--- 270 (456)
. +.++. .+++++++++|+. .|.+++ ++++.-|+.+ ++||||.. ..|.+
T Consensus 266 ~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY-dGi~yd~~~I~~~~g~~~ilvDEAhgah~~F~p~~~ 344 (713)
T PRK15399 266 RNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY-DGLLYNTDWIKQTLDVPSIHFDSAWVPYTHFHPIYQ 344 (713)
T ss_pred ccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC-CceeeCHHHHHHHhCCCEEEEeccchhhhhcCcccC
Confidence 2 22211 1346888888743 588877 3555557766 59999984 12222
Q ss_pred ----CCC--CCCC-cEEEecCccccCCCCceE-EEEEEeCHHH-HHHHHHHHh
Q 012785 271 ----ITY--PADH-DLMLFTVSKSTGHAGTRI-GWALVKDMEV-AKKMTKYIE 314 (456)
Q Consensus 271 ----~~~--~~~~-~i~i~S~SK~~g~~G~Ri-G~l~~~~~~~-~~~l~~~~~ 314 (456)
+.. ..|- ++.+.|..|++ +++.- .++.++. .+ .+++.....
T Consensus 345 ~~sam~~~~~aD~~i~~tQStHKtL--~alTQaS~iHvk~-~vd~~~~n~a~~ 394 (713)
T PRK15399 345 GKSGMSGERVPGKVIFETQSTHKML--AAFSQASLIHIKG-EYDEETFNEAFM 394 (713)
T ss_pred CcChhhCCCCCCeeeeeeeehhccc--cccchheeeeecC-CCCHHHHHHHHH
Confidence 211 1233 34499999986 55543 4565642 22 244555443
No 356
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.84 E-value=9e-07 Score=93.53 Aligned_cols=137 Identities=12% Similarity=0.102 Sum_probs=96.8
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc-
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG- 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~- 220 (456)
..+..+.+|+.++. .+-.+++||++.++.+++.+++.+|| .|+++.-++-.....+.+.|++++.+..
T Consensus 197 i~eAe~~AA~~fgA-------d~tyfvvNGTS~~n~av~~a~~~~Gd----~VLvdRN~HKSv~haLilsga~PVYl~P~ 265 (714)
T PRK15400 197 HKEAEEYIARVFNA-------DRSYMVTNGTSTANKIVGMYSAPAGS----TVLIDRNCHKSLTHLMMMSDVTPIYFRPT 265 (714)
T ss_pred HHHHHHHHHHHhCC-------CcEEEEeCchHHHHHHHHHHhcCCCC----EEEeecccHHHHHHHHHHcCCeEEEeccc
Confidence 35667777777763 45788999999999999999999999 9999999999999999999999885432
Q ss_pred ----------C-----cccccc--------CCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCC-----CC
Q 012785 221 ----------D-----AKRFNK--------DGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYW-----PQ 267 (456)
Q Consensus 221 ----------d-----~~~l~~--------~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~-----~~ 267 (456)
+ .+.++. .++..+++++|+. .|.++. ++|..++ |++||||.. +.
T Consensus 266 rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~ 342 (714)
T PRK15400 266 RNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY-DGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPI 342 (714)
T ss_pred ccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC-ccEecCHHHHHHHhCCCC--EEEEccchhhhccCcc
Confidence 2 222221 1233678877743 588876 3566666 689999984 11
Q ss_pred CC---CCCC-CC--CCcEEEecCccccCCCCce
Q 012785 268 YT---SITY-PA--DHDLMLFTVSKSTGHAGTR 294 (456)
Q Consensus 268 ~~---~~~~-~~--~~~i~i~S~SK~~g~~G~R 294 (456)
+. ++.. .. +.++++.|..|++ +|+.
T Consensus 343 ~~~~sam~~ga~~~~~i~vtQStHKtL--~alT 373 (714)
T PRK15400 343 YEGKCGMSGGRVEGKVIYETQSTHKLL--AAFS 373 (714)
T ss_pred cCCcChhhcCCCCCCceEEEEchhhcc--cchh
Confidence 21 1211 11 3458899999986 4543
No 357
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.84 E-value=2.7e-06 Score=83.79 Aligned_cols=260 Identities=12% Similarity=0.034 Sum_probs=163.5
Q ss_pred eE-EEccCHHHHHHHHHHHhcCCCCCCCcEEE--EeCCCCCC-hhhhhhhcCCeEeeec----------cCccccccC-C
Q 012785 165 HI-VVGTGSTQLFQAALYALSSQDASEPISVV--SAAPYYSS-YPSITDCVKSRLYKWA----------GDAKRFNKD-G 229 (456)
Q Consensus 165 ~I-~~t~G~~~al~~~~~~l~~~gd~~~~~Vl--v~~P~y~~-~~~~~~~~g~~~~~~~----------~d~~~l~~~-~ 229 (456)
+| +++.|++.+++.+...|+.+|+ +++ +..=.|.. +...++.+| ++.... .+.+.++.. +
T Consensus 69 ~Vlfl~GggT~~~ea~~~Nll~~g~----~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~~~~d 143 (364)
T PRK12462 69 GVVFLQGGSSLQFSMIPMNFSRPGA----AAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAELDWDAR 143 (364)
T ss_pred eEEEEeccHHHHHHHHHHHcCCCCC----cEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHhccCCC
Confidence 45 4566699999999999999988 665 44433332 334555555 222111 122233222 3
Q ss_pred CeEEEEcCCCCCCcccchHHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHH
Q 012785 230 PYIELVTSPNNPDGSVRQSVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKM 309 (456)
Q Consensus 230 ~~~i~v~~P~NPtG~~~~~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l 309 (456)
.+.+.++.-.=.||+..+++.+.++.++|+|-+=.-. -.++ +..+-++++.+.=|.+|.|| ++.+++. ++..++.
T Consensus 144 ~~~v~~t~NETstGv~~~~~~~~~~~llvvD~sS~~~-s~pi-d~~~~dvi~agsQKnlgP~G--ltvvivs-~~al~~~ 218 (364)
T PRK12462 144 APFRHYVSNETVEGLQFPDAAGLPDSPLIADMSSDFM-SRPF-DVEAYGMVYAHAQKNLGPAG--VTVAIIR-RALLERV 218 (364)
T ss_pred CcEEEEccCCCCceEecCcccccCCCeEEEEcCchhh-CCCC-ChHHccEEEeeccccCCCCc--eEEEEEC-HHHHhhc
Confidence 4454443222355888888777789999999764421 1122 12223899999999999998 5677776 7776654
Q ss_pred HHH-------H----h-hccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q 012785 310 TKY-------I----E-LNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVP 377 (456)
Q Consensus 310 ~~~-------~----~-~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~ 377 (456)
.+. + . .+...++...-+++...|+.+.+.. .-++.+.++.+++.+.+++.+++.+++...
T Consensus 219 ~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~--------GGl~~~~~r~~~ka~~ly~~id~~~~~~~~ 290 (364)
T PRK12462 219 PDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEI--------GGVHAMRDINARKAAMLYATLDALNEVIDC 290 (364)
T ss_pred cccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhc--------cCHHHHHHHHHHHHHHHHHHHHhCCCcccC
Confidence 331 0 1 1223556777777888887764310 136778888899999999999988633322
Q ss_pred CCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC--ChhHHHHHHHHHHh
Q 012785 378 ELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD--RDENYNLFVQRLSK 453 (456)
Q Consensus 378 ~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~ 453 (456)
...... .+.. -+.+++++ ..+.+.+.++++|+....|.. ..+.+|+|+-. +.|.++.+++-+++
T Consensus 291 ~~~~~~--------RS~m-nv~f~~~~~~l~~~f~~~a~~~gl~~lkGhr---~vgg~Ras~yna~~~e~v~~L~~fm~~ 358 (364)
T PRK12462 291 HAHRAA--------RSTM-NVAFRFRQPRLDTLFKEQSTEAGFCGLSGHR---SIGGIRASLYNAVSEQAVSRLCAFLKD 358 (364)
T ss_pred CCChhh--------cCcc-eEEEEcCCHHHHHHHHHHHHHCCCccccCCc---ccCceEEEcCCCCCHHHHHHHHHHHHH
Confidence 222111 1222 35556643 356788888999999877653 24569999754 88999999888877
Q ss_pred h
Q 012785 454 I 454 (456)
Q Consensus 454 ~ 454 (456)
+
T Consensus 359 f 359 (364)
T PRK12462 359 F 359 (364)
T ss_pred H
Confidence 6
No 358
>PF04863 EGF_alliinase: Alliinase EGF-like domain; InterPro: IPR006947 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A.
Probab=98.83 E-value=1.1e-09 Score=73.41 Aligned_cols=42 Identities=7% Similarity=0.007 Sum_probs=28.9
Q ss_pred CCCchhhHHHHhhhhhccccCCCceeecccccccccCCCCCCccccccccc
Q 012785 36 NFDSSFSLQQQRRSVMAGCVLKEKEHVSERTHLSLSSSPSPSPSSSLTSTD 86 (456)
Q Consensus 36 ~~w~~~~~~~~~~~~~~~c~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (456)
.+|++++++|||++|+|+||+|||+|+| ++..++ .+.++|+.
T Consensus 1 l~Wt~~Aa~eAeavAai~CSGHGr~flD-----g~~~dG----~p~CECn~ 42 (56)
T PF04863_consen 1 LSWTLRAAEEAEAVAAISCSGHGRAFLD-----GLIADG----SPVCECNS 42 (56)
T ss_dssp -STTHHHHHHHHHHHTS--TTSEE--TT-----S-EETT----EE--EE-T
T ss_pred CchHHHHHHHHHHhhcCCcCCCCeeeec-----cccccC----CccccccC
Confidence 3799999999999999999999999999 455555 37888876
No 359
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.82 E-value=1.2e-06 Score=92.71 Aligned_cols=145 Identities=13% Similarity=0.056 Sum_probs=101.0
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhh-hhhcCCeEeeecc
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSI-TDCVKSRLYKWAG 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~-~~~~g~~~~~~~~ 220 (456)
-.+..+.+|+.++. .+-.+++||++.++.+++.+++.+|| .|+++.-++-..... +.+.|++++.+..
T Consensus 176 i~eAq~~AA~~fgA-------d~tyFlvNGTS~gn~a~i~a~~~~Gd----~VLvdRN~HKSv~hgaLiLsGa~PVYl~P 244 (720)
T PRK13578 176 AKDAQKHAAKVFNA-------DKTYFVLNGTSASNKVVTNALLTPGD----LVLFDRNNHKSNHHGALIQAGATPVYLET 244 (720)
T ss_pred HHHHHHHHHHHhCC-------CceEEEeCChhHHHHHHHHHhcCCCC----EEEeecccHHHHHHHHHHHcCCeEEEeec
Confidence 35667777777763 45788999999999999999999999 999999999988885 7888998875432
Q ss_pred -----------Cccc-----cc----cC--------C-CeEEEEcCCCCCCcccch-----HH-hhhcCcEEEeeecCCC
Q 012785 221 -----------DAKR-----FN----KD--------G-PYIELVTSPNNPDGSVRQ-----SV-VNRSGGILVHDLAYYW 265 (456)
Q Consensus 221 -----------d~~~-----l~----~~--------~-~~~i~v~~P~NPtG~~~~-----~l-~~~~~~~iI~De~y~~ 265 (456)
+.+. ++ .. + .+++++++|+. .|.++. ++ ++..+ .|++||||..
T Consensus 245 ~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~-~llvDEAhga 322 (720)
T PRK13578 245 ARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCD-YILFDSAWVG 322 (720)
T ss_pred cccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccCC-cEEEeCcchh
Confidence 2211 21 11 1 47888887754 488876 23 56677 9999999984
Q ss_pred -CCCCC----CC-----CCC--CCcEEEecCccccCCCCceE-EEEEEe
Q 012785 266 -PQYTS----IT-----YPA--DHDLMLFTVSKSTGHAGTRI-GWALVK 301 (456)
Q Consensus 266 -~~~~~----~~-----~~~--~~~i~i~S~SK~~g~~G~Ri-G~l~~~ 301 (456)
..|.+ ++ ... ..++++.|..|++ +++.- .++.+.
T Consensus 323 h~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~LHvk 369 (720)
T PRK13578 323 YEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQIHKK 369 (720)
T ss_pred hhccCcccccCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhhhcC
Confidence 12222 11 111 2358899999986 55544 455554
No 360
>PLN02880 tyrosine decarboxylase
Probab=98.78 E-value=1.5e-06 Score=89.75 Aligned_cols=285 Identities=12% Similarity=0.031 Sum_probs=166.2
Q ss_pred HHHHHHHHHHHH-HhcCccCC----CceEEEccCHHHHHHHHHHHhcCC-----C--CCCCcEEEEeCCCCCChhhhhhh
Q 012785 143 PEFAKEVVRLHK-VVGNAITE----NHHIVVGTGSTQLFQAALYALSSQ-----D--ASEPISVVSAAPYYSSYPSITDC 210 (456)
Q Consensus 143 ~~lr~aia~~~~-~~g~~~~~----~~~I~~t~G~~~al~~~~~~l~~~-----g--d~~~~~Vlv~~P~y~~~~~~~~~ 210 (456)
.++++.+.+|+. ..|.+... ...-++|+|+++++..++.+.... | ...+..|++.+-++......+..
T Consensus 121 ~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~ 200 (490)
T PLN02880 121 TELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQI 200 (490)
T ss_pred HHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHH
Confidence 788888888884 45654310 023567899999987776654321 1 01122566788888889999999
Q ss_pred cCCe---Eeeecc--------CccccccC---------CCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCC
Q 012785 211 VKSR---LYKWAG--------DAKRFNKD---------GPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYW 265 (456)
Q Consensus 211 ~g~~---~~~~~~--------d~~~l~~~---------~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~ 265 (456)
+|+. ++.++. |.+.|++. .+.+|+-+-..-+||.+-+ ++|+++|+|+.+|-+|.+
T Consensus 201 lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg 280 (490)
T PLN02880 201 AGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAG 280 (490)
T ss_pred cCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHH
Confidence 9984 444444 33333221 2455666666778899866 489999999999999986
Q ss_pred CCC-----CC-CCCCCCCcEEEecCccccCCCCceEEEEEEeCHHH-HHHHHHHHhhcc--------------C---cCC
Q 012785 266 PQY-----TS-ITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEV-AKKMTKYIELNT--------------I---GVS 321 (456)
Q Consensus 266 ~~~-----~~-~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~-~~~l~~~~~~~~--------------~---~~s 321 (456)
... .. +.....-+-+..++.|.++ ...-+|.++++++.. .+.+........ + ...
T Consensus 281 ~~~~~~~~~~~l~gie~aDSit~d~HKwl~-~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~r 359 (490)
T PLN02880 281 SACICPEYRHYIDGVEEADSFNMNAHKWFL-TNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGR 359 (490)
T ss_pred HHHhCHHHHHHhcCchhcCEEEECchhhcC-CCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCCC
Confidence 311 11 1122234688899999876 668899999975432 222211110000 0 001
Q ss_pred hHHHHHHHHH---HHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceE
Q 012785 322 KDSQLRAAKV---LKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFA 398 (456)
Q Consensus 322 ~~~q~~a~~~---L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~ 398 (456)
.+. +.++ |+. -| .+-+++..++.-+..+++.+.|++.+.+++..+... +-+
T Consensus 360 r~~---alklw~~l~~--~G--------~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~-------------~iv 413 (490)
T PLN02880 360 RFR---SLKLWMVLRL--YG--------VENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIF-------------SLV 413 (490)
T ss_pred ccc---HHHHHHHHHH--hC--------HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCce-------------EEE
Confidence 111 2222 321 12 344555555555777888888888776666544221 123
Q ss_pred EeecCc---c-------HHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC---ChhHHHHHHHHHHhhh
Q 012785 399 WLKCEQ---E-------IEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD---RDENYNLFVQRLSKIL 455 (456)
Q Consensus 399 ~~~~~~---~-------~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~---~~e~i~~~l~~L~~~l 455 (456)
.++++. + .+.+.+.+.+.|-.......+. +..++|+++.. ++++++.+++.|.++.
T Consensus 414 ~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~-g~~~lR~~~~n~~tt~~di~~~~~~i~~~~ 482 (490)
T PLN02880 414 CFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVLS-GKYVLRFAVGAPLTEERHVTAAWKVLQDEA 482 (490)
T ss_pred EEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEEC-CEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 334421 1 1234444444444433333332 36699999864 5689999999987753
No 361
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.78 E-value=2.6e-06 Score=92.46 Aligned_cols=262 Identities=13% Similarity=0.046 Sum_probs=156.2
Q ss_pred EEccCHHHHHHHHHHHhcC----CCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC------cccccc------CCC
Q 012785 167 VVGTGSTQLFQAALYALSS----QDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD------AKRFNK------DGP 230 (456)
Q Consensus 167 ~~t~G~~~al~~~~~~l~~----~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d------~~~l~~------~~~ 230 (456)
+..+|+.++-...+.+... .|+..+.+|+++.-.+......++..|++++.++.| .+.++. .++
T Consensus 550 l~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~t 629 (939)
T TIGR00461 550 LQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQDGNIDLVDLKNKAEQHGDEL 629 (939)
T ss_pred cCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhhcCCce
Confidence 3455555655444433332 222122278899988877777788899999887764 333321 267
Q ss_pred eEEEEcCCCCCCcccch------HHhhhcCcEEEeeecCCC-CCCCCCCCCCCCcEEEecCccccCC----CCceEEEEE
Q 012785 231 YIELVTSPNNPDGSVRQ------SVVNRSGGILVHDLAYYW-PQYTSITYPADHDLMLFTVSKSTGH----AGTRIGWAL 299 (456)
Q Consensus 231 ~~i~v~~P~NPtG~~~~------~l~~~~~~~iI~De~y~~-~~~~~~~~~~~~~i~i~S~SK~~g~----~G~RiG~l~ 299 (456)
++|++++|+| +|.+-+ ++|+++|.++++|-++.- ......+...+-+++++|..|+|+. .|=-+|.+.
T Consensus 630 aaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~ 708 (939)
T TIGR00461 630 AAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIG 708 (939)
T ss_pred EEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEE
Confidence 8999999999 898755 378889999999999864 2111122345678999999997652 233479999
Q ss_pred EeCHHHHHHHHHHH---------------hhccCcC-ChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHH
Q 012785 300 VKDMEVAKKMTKYI---------------ELNTIGV-SKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQ 363 (456)
Q Consensus 300 ~~~~~~~~~l~~~~---------------~~~~~~~-s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 363 (456)
++ +++...+-... .....+. +......+...|.. -| .+-+++.-+..-.+.++
T Consensus 709 vr-~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~--lG--------~~GL~~~a~~ailnAnY 777 (939)
T TIGR00461 709 VK-SHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKM--MG--------NEGLPKASVVAILNANY 777 (939)
T ss_pred Eh-hhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHH--HC--------HHHHHHHHHHHHHHHHH
Confidence 97 55444332000 0001011 11111223333332 12 45566667767778888
Q ss_pred HHHHHHhcCCccccCC--CCcccccccccCCCCCceEEeecC-------ccHHHHHHHHHhCCEEeecCCCCCC-CCCeE
Q 012785 364 LRMAVQKSGLFSVPEL--PSQFCTFLGRAFEPQPAFAWLKCE-------QEIEDCESFLKGNKILTRSGKHFGF-SPKYV 433 (456)
Q Consensus 364 l~~~L~~~~~~~~~~~--~g~~~~~~~~~~~~~~~f~~~~~~-------~~~~~~~~~l~~~gI~v~pg~~fg~-~~~~i 433 (456)
+.+.|++. +.+.-+ .+.+.+ =+.++++ ....++.+.|.++|+..-. ..|.. +.-.|
T Consensus 778 l~~rL~~~--~~~l~~~~~~~~~h-----------Efv~~~~~~~~~~g~~~~dIakrL~d~G~hapt-~~~pv~g~lmi 843 (939)
T TIGR00461 778 MATRLKDH--YPILFVGTLKHVAH-----------ECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPT-LSFPVPGTLMV 843 (939)
T ss_pred HHHHhhcc--CcccccCCCCceeE-----------EEEEeccchhhhcCCCHHHHHHHHHhCCeeccc-cCCccCCeEEE
Confidence 88888763 222211 111100 0333443 2467899999999998543 33432 22357
Q ss_pred EEEecCChhHHHHHHHHHHhh
Q 012785 434 RISMLDRDENYNLFVQRLSKI 454 (456)
Q Consensus 434 Ris~~~~~e~i~~~l~~L~~~ 454 (456)
|.+-+.++++++.+++.|.++
T Consensus 844 epTE~eskeelD~f~~al~~I 864 (939)
T TIGR00461 844 EPTESESLEELDRFCDAMIAI 864 (939)
T ss_pred EeeccCCHHHHHHHHHHHHHH
Confidence 777766999999999998765
No 362
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=98.78 E-value=4.5e-06 Score=86.54 Aligned_cols=284 Identities=12% Similarity=0.083 Sum_probs=168.5
Q ss_pred HHHHHHHHHHHHH-hcCcc----------CCCceEEEccCHHHHHHHHHHHhcCC-----C-----------------CC
Q 012785 143 PEFAKEVVRLHKV-VGNAI----------TENHHIVVGTGSTQLFQAALYALSSQ-----D-----------------AS 189 (456)
Q Consensus 143 ~~lr~aia~~~~~-~g~~~----------~~~~~I~~t~G~~~al~~~~~~l~~~-----g-----------------d~ 189 (456)
.++++.+.+|+.. .+... .+...-++|+|+++++..++.+.... + ..
T Consensus 128 t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~ 207 (522)
T TIGR03799 128 TPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGY 207 (522)
T ss_pred HHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccC
Confidence 7899999888843 32110 01123467999999988777654321 0 00
Q ss_pred CCcEEEEeCCCCCChhhhhhhcCC---eEeeeccC------cccccc-------CCCe--EEEEcCCCCCCcccch----
Q 012785 190 EPISVVSAAPYYSSYPSITDCVKS---RLYKWAGD------AKRFNK-------DGPY--IELVTSPNNPDGSVRQ---- 247 (456)
Q Consensus 190 ~~~~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~d------~~~l~~-------~~~~--~i~v~~P~NPtG~~~~---- 247 (456)
.+..|++.+-.+......++.+|. +++.++.| .+.++. .+.+ +|+.+..++.||.+-+
T Consensus 208 ~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eI 287 (522)
T TIGR03799 208 DGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEM 287 (522)
T ss_pred CceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHH
Confidence 123688888888888888888887 56666554 333432 2333 3333455679999977
Q ss_pred -HHhhhcCcEEEeeecCCCCCCC-C-----CCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhh-----
Q 012785 248 -SVVNRSGGILVHDLAYYWPQYT-S-----ITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIEL----- 315 (456)
Q Consensus 248 -~l~~~~~~~iI~De~y~~~~~~-~-----~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~----- 315 (456)
++|+++|+++.+|-+|.+.... + +.....-+.+..+..|.++.| .-+|.+++++++..+.+......
T Consensus 288 a~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P-~g~G~llvr~~~~~~~~~~~~~Yl~~~~ 366 (522)
T TIGR03799 288 ADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVP-MGAGMVLFKDPALMSAIEHHAEYILRKG 366 (522)
T ss_pred HHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcC-cccEEEEEeCHHHHHHhccCcchhcCCC
Confidence 4899999999999999863211 1 111224478899999955423 45899999877666555431000
Q ss_pred ------ccCcCChHHH-HHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccccccc
Q 012785 316 ------NTIGVSKDSQ-LRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLG 388 (456)
Q Consensus 316 ------~~~~~s~~~q-~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~ 388 (456)
.++..+.... ..+-..|+.+ + ..-++.+.++..+..+++.+.|++.+.+++..++. +
T Consensus 367 ~~d~~~~~legsR~~~al~lw~aL~~l--G--------~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p~-l----- 430 (522)
T TIGR03799 367 SKDLGSHTLEGSRPGMAMLVYAGLHII--G--------RKGYELLIDQSIEKAKYFADLIQQQPDFELVTEPE-L----- 430 (522)
T ss_pred CCccccceeecCcchHHHHHHHHHHHH--h--------HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCCC-c-----
Confidence 0111222221 1233333322 1 34567788888889999999999887777655421 1
Q ss_pred ccCCCCCceEEeec-Cc-----------------------cHHHHHHHHHhCCEEeecCC-----CC-CCCCCeEEEEec
Q 012785 389 RAFEPQPAFAWLKC-EQ-----------------------EIEDCESFLKGNKILTRSGK-----HF-GFSPKYVRISML 438 (456)
Q Consensus 389 ~~~~~~~~f~~~~~-~~-----------------------~~~~~~~~l~~~gI~v~pg~-----~f-g~~~~~iRis~~ 438 (456)
+-+.+++ |. -...+.+.+.+.|....... .+ |.+...+|+++.
T Consensus 431 -------~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~ 503 (522)
T TIGR03799 431 -------CLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLA 503 (522)
T ss_pred -------cEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEec
Confidence 0122221 10 01345566666776655422 22 222357999987
Q ss_pred C---ChhHHHHHHHH
Q 012785 439 D---RDENYNLFVQR 450 (456)
Q Consensus 439 ~---~~e~i~~~l~~ 450 (456)
. ++++++.+++.
T Consensus 504 np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 504 NPLTTHEILQDILDE 518 (522)
T ss_pred CCCCCHHHHHHHHHH
Confidence 5 67788877764
No 363
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.77 E-value=3.8e-06 Score=90.78 Aligned_cols=263 Identities=13% Similarity=0.042 Sum_probs=147.7
Q ss_pred CHHHHHHHHHHHhc----CCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc------cccc------CCCeEEE
Q 012785 171 GSTQLFQAALYALS----SQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK------RFNK------DGPYIEL 234 (456)
Q Consensus 171 G~~~al~~~~~~l~----~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~------~l~~------~~~~~i~ 234 (456)
++.++-.+.+.++. .+|+....+|+++.-.+......+...|++++.++.|.+ .++. .++.+|+
T Consensus 567 sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G~iDle~L~a~I~~~~~~laaVm 646 (954)
T PRK12566 567 SGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDGNVDLDDLKAKAAAAGDRLSCLM 646 (954)
T ss_pred chHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHhhccCCCEEEEE
Confidence 44455545555543 233322227888887765555567778999988877533 2221 2556778
Q ss_pred EcCCCCCCcccc--h---HHhhhcCcEEEeeecCCC-CCCCCCCCCCCCcEEEecCccccCCC----CceEEEEEEeCHH
Q 012785 235 VTSPNNPDGSVR--Q---SVVNRSGGILVHDLAYYW-PQYTSITYPADHDLMLFTVSKSTGHA----GTRIGWALVKDME 304 (456)
Q Consensus 235 v~~P~NPtG~~~--~---~l~~~~~~~iI~De~y~~-~~~~~~~~~~~~~i~i~S~SK~~g~~----G~RiG~l~~~~~~ 304 (456)
+++|++=.+... . ++++++|+++++|-+..- ......+...+-+++.+++.|+|+.| |.-+|.+.+. ++
T Consensus 647 iT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~-~~ 725 (954)
T PRK12566 647 ITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVR-AH 725 (954)
T ss_pred EEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhh-hh
Confidence 888876544322 2 367889999999998752 11111123456789999999988533 3335665554 44
Q ss_pred HHHHHHHHH--h-------hccC-c---CChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Q 012785 305 VAKKMTKYI--E-------LNTI-G---VSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKS 371 (456)
Q Consensus 305 ~~~~l~~~~--~-------~~~~-~---~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~ 371 (456)
+...+...- . ..+. . .+.....++...+..+ | .+ +.+.......+.+++.+.|.+.
T Consensus 726 L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~l--G--------~e-Lk~aa~~ailnAnYla~rL~~~ 794 (954)
T PRK12566 726 LAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMM--G--------PQ-LADASEVAILSANYLANQLGGA 794 (954)
T ss_pred hhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHH--C--------HH-HHHHHHHHHHHHHHHHHHhHhh
Confidence 443333210 0 0011 1 1111122333333321 2 34 6666666667788888888764
Q ss_pred CCccccCCCCcccccccccCCCCCceEEeecC----ccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC--ChhHHH
Q 012785 372 GLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE----QEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD--RDENYN 445 (456)
Q Consensus 372 ~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~----~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~--~~e~i~ 445 (456)
-...+.++.+.+.. +....+..++ .+.+++.+.|.++||..-- ..|. ..+.+|++..- ++++++
T Consensus 795 ~~v~~~~~~~~~~h--------Efii~~~~l~~~~g~~~~dvakRL~d~Gihapt-~~fP-v~~~LmIepTE~eskeEID 864 (954)
T PRK12566 795 FPVLYRGRNERVAH--------ECILDLRPLKAQTGISEEDVAKRLMDYGFHAPT-MSFP-VPGTLMVEPTESESKAELD 864 (954)
T ss_pred CCCCcCCCCCCeee--------EEEEEccccccccCCCHHHHHHHHHHCCcEEeE-Eeec-cCCEEEEEeeeeCCHHHHH
Confidence 22333222222100 0001111222 2456688888899998544 3443 47899999753 899999
Q ss_pred HHHHHHHhhh
Q 012785 446 LFVQRLSKIL 455 (456)
Q Consensus 446 ~~l~~L~~~l 455 (456)
.+++.|+++.
T Consensus 865 rf~eAL~~I~ 874 (954)
T PRK12566 865 RFVEAMLSIR 874 (954)
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 364
>PLN02590 probable tyrosine decarboxylase
Probab=98.76 E-value=4.1e-06 Score=86.81 Aligned_cols=288 Identities=14% Similarity=0.077 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHH-HhcCccC----CCceEEEccCHHHHHHHHHHHhcCC-----CC--CCCcEEEEeCCCCCChhhhhhh
Q 012785 143 PEFAKEVVRLHK-VVGNAIT----ENHHIVVGTGSTQLFQAALYALSSQ-----DA--SEPISVVSAAPYYSSYPSITDC 210 (456)
Q Consensus 143 ~~lr~aia~~~~-~~g~~~~----~~~~I~~t~G~~~al~~~~~~l~~~-----gd--~~~~~Vlv~~P~y~~~~~~~~~ 210 (456)
.++++.+.+|+. ..|.+.. ....=++++|+++++..++.+.... |. ..+..|++.+-++......+..
T Consensus 169 t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~i 248 (539)
T PLN02590 169 TELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLI 248 (539)
T ss_pred HHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHH
Confidence 789999999884 4665531 0123567899999887776654331 10 1112566678888889999999
Q ss_pred cCC---eEeeeccC--------ccccccC---------CCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCC
Q 012785 211 VKS---RLYKWAGD--------AKRFNKD---------GPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYW 265 (456)
Q Consensus 211 ~g~---~~~~~~~d--------~~~l~~~---------~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~ 265 (456)
+|+ .++.++.| .+.|+.. .+.+|+-+-..=+||.+=+ ++|+++++|+-+|-+|.+
T Consensus 249 lGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG 328 (539)
T PLN02590 249 GGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAG 328 (539)
T ss_pred cCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhh
Confidence 987 35555544 3333221 2455665566777888744 489999999999999996
Q ss_pred CC-----CCCCCCC-CCCcEEEecCccccCCCCceEEEEEEeCHH-HHHHHHH---HHhh-------------ccCcCCh
Q 012785 266 PQ-----YTSITYP-ADHDLMLFTVSKSTGHAGTRIGWALVKDME-VAKKMTK---YIEL-------------NTIGVSK 322 (456)
Q Consensus 266 ~~-----~~~~~~~-~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~-~~~~l~~---~~~~-------------~~~~~s~ 322 (456)
.. +..+... ..-+=+...+.|.+. ...-.|.++++++. +.+.+.. +... .+...+.
T Consensus 329 ~al~~~~~r~~~~Gie~ADSit~D~HK~l~-~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsR 407 (539)
T PLN02590 329 NACICPEYRKFIDGIENADSFNMNAHKWLF-ANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSR 407 (539)
T ss_pred hhhcChhhHHHhcCCccCCEEEECchhhcC-cCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCC
Confidence 32 1111111 222556778999776 66889999998653 3333321 1100 0111122
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeec
Q 012785 323 DSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKC 402 (456)
Q Consensus 323 ~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~ 402 (456)
-. .+.++.-.+..- ..+-++++.++.-+..+++.+.+++.+.+++..+.. + +-+.+++
T Consensus 408 r~--raLklW~~lr~~-------G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~-l------------~iVcFr~ 465 (539)
T PLN02590 408 RF--RSLKLWMVLRLY-------GSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRY-F------------SLVCFRL 465 (539)
T ss_pred ch--HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc-e------------EEEEEEe
Confidence 11 122222211111 145566777777788888999998887777655422 1 1233333
Q ss_pred Cc---c-------HHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC---ChhHHHHHHHHHHhh
Q 012785 403 EQ---E-------IEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD---RDENYNLFVQRLSKI 454 (456)
Q Consensus 403 ~~---~-------~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~---~~e~i~~~l~~L~~~ 454 (456)
.. + ...+.+.+.+.|.......... +..++|++++. ++++++.+++.|.+.
T Consensus 466 ~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~-g~~~lR~~i~n~~T~~~dv~~~~~~i~~~ 529 (539)
T PLN02590 466 APVDGDEDQCNERNRELLAAVNSTGKIFISHTALS-GKFVLRFAVGAPLTEEKHVTEAWQIIQKH 529 (539)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEEC-CEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 21 1 1345555555665554433332 35689999874 688999999998775
No 365
>PLN02263 serine decarboxylase
Probab=98.72 E-value=9.7e-06 Score=82.11 Aligned_cols=270 Identities=13% Similarity=0.073 Sum_probs=168.1
Q ss_pred CHHHHHHHHHHHH-HhcCccCCCceEEEccCHHHHHHHHHHHhcCC--CCCCCcEEEEeCCCCCChhhhhhhcCCeEeee
Q 012785 142 EPEFAKEVVRLHK-VVGNAITENHHIVVGTGSTQLFQAALYALSSQ--DASEPISVVSAAPYYSSYPSITDCVKSRLYKW 218 (456)
Q Consensus 142 ~~~lr~aia~~~~-~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~--gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~ 218 (456)
..++++.+-+|+. ..|.+.... .=.+|+|+|+++..++.+..+. .. .|++++-++......++.+|++++.+
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~-~G~vtsGGTEaNL~Al~aARe~~~~~----vvy~S~~aH~Sv~KAa~llgi~~~~V 205 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEY-WGYITNCGTEGNLHGILVGREVFPDG----ILYASRESHYSVFKAARMYRMECVKV 205 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCC-eEEEeCcHHHHHHHHHHHHHhhcCCc----EEEEcCCccHHHHHHHHhcCCcceEe
Confidence 4788888888884 456543211 2467999999998888776542 22 78889999999999999999998876
Q ss_pred ccC------cccccc----C--CCeEEEEcCCCCCCcccch-----HHhhhcCc-----EEEeeecCCCCCC---C---C
Q 012785 219 AGD------AKRFNK----D--GPYIELVTSPNNPDGSVRQ-----SVVNRSGG-----ILVHDLAYYWPQY---T---S 270 (456)
Q Consensus 219 ~~d------~~~l~~----~--~~~~i~v~~P~NPtG~~~~-----~l~~~~~~-----~iI~De~y~~~~~---~---~ 270 (456)
+.| .+.|+. + ++.+|+.+-+.=++|.+=+ ++|+++|+ |+-+|-+|.+.-. . .
T Consensus 206 p~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~ 285 (470)
T PLN02263 206 DTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPK 285 (470)
T ss_pred ccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccc
Confidence 654 333432 2 2556666677889999844 47888886 9999999986211 1 1
Q ss_pred CCCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHh-----hccCcCChHHHHHH--HHHHHhhhCCCCCCC
Q 012785 271 ITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIE-----LNTIGVSKDSQLRA--AKVLKVVSDSCKPSG 343 (456)
Q Consensus 271 ~~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~-----~~~~~~s~~~q~~a--~~~L~~~~~~~~~~~ 343 (456)
+.....-+=+..+..|.++ .-...|.++.+ ....+.+..-.. ..+...+...+.++ -..|+. -|
T Consensus 286 ~df~~~vDSIsvD~HK~l~-~P~~cgvll~R-~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~--~G----- 356 (470)
T PLN02263 286 VTFKKPIGSVSVSGHKFVG-CPMPCGVQITR-MEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNR--KG----- 356 (470)
T ss_pred cCCCcCccEEEECCccccC-CCcCEEEEEEe-hhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHH--hC-----
Confidence 1111112344667889776 66889999998 444443322111 01233343332222 222221 12
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecC
Q 012785 344 SEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSG 423 (456)
Q Consensus 344 ~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg 423 (456)
.+-+++..+..-+..+++.+.|++.+...+..|.. +-+.++.+.+ +. ..+|-.+..
T Consensus 357 ---~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s--------------~~V~f~~p~~-~~-----~~~gW~L~~- 412 (470)
T PLN02263 357 ---YRGFQKEVQKCLRNAHYLKDRLREAGISAMLNELS--------------STVVFERPKD-EE-----FVRRWQLAC- 412 (470)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCc--------------eEEEEecCch-HH-----hhcceEEcc-
Confidence 45566667777778888888998876444443332 2344443321 11 234555543
Q ss_pred CCCCCCCCeEEEEecC--ChhHHHHHHHHHHhh
Q 012785 424 KHFGFSPKYVRISMLD--RDENYNLFVQRLSKI 454 (456)
Q Consensus 424 ~~fg~~~~~iRis~~~--~~e~i~~~l~~L~~~ 454 (456)
.++.++|.+.. +.+.++++++.|++.
T Consensus 413 -----~~~~~Hivvmphv~~~~id~fi~DL~~~ 440 (470)
T PLN02263 413 -----QGNIAHVVVMPSVTIEKLDYFLKELVEK 440 (470)
T ss_pred -----CCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 24568999864 778999999998765
No 366
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.66 E-value=8e-06 Score=83.20 Aligned_cols=264 Identities=13% Similarity=0.138 Sum_probs=155.2
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc-
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG- 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~- 220 (456)
-.+..+.+|+.++. ....+++||++.++..++.+++.+|| .|+++..++-.........|+..+.+..
T Consensus 72 i~eAqe~aA~~fgA-------d~tyFvvNGTS~ank~vi~a~~~~GD----~VLvdRN~HKSi~~glilaGa~Pvyl~p~ 140 (557)
T COG1982 72 IKEAQELAARVFGA-------DHTYFVVNGTSTANKAVINAVLTPGD----KVLVDRNCHKSIHHGLILAGATPVYLEPS 140 (557)
T ss_pred HHHHHHHHHHHhCC-------CceEEEECCccHHHHHHHHhhcCCCC----EEEecCCccHHHHHHHHHcCCceEEecCC
Confidence 46778888888874 45788999999999999999999999 9999999999999999999998875443
Q ss_pred -----------Ccccccc-----CCC-eEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCC-CCCCC-CC---C
Q 012785 221 -----------DAKRFNK-----DGP-YIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYW-PQYTS-IT---Y 273 (456)
Q Consensus 221 -----------d~~~l~~-----~~~-~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~-~~~~~-~~---~ 273 (456)
+.+.+++ ... ++++++||.. .|+++. +++..+++++..|++..- ..+.+ ++ .
T Consensus 141 ~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~ 219 (557)
T COG1982 141 RNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESAL 219 (557)
T ss_pred CCccccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhh
Confidence 2222222 123 7777866543 388876 256778999999998762 11222 11 1
Q ss_pred CCCCcEEEecCccccCCCCceEEEEEEeC--HHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHH
Q 012785 274 PADHDLMLFTVSKSTGHAGTRIGWALVKD--MEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFE 351 (456)
Q Consensus 274 ~~~~~i~i~S~SK~~g~~G~RiG~l~~~~--~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~ 351 (456)
....++..-|..|.++ +..-..++.+++ .--.+++..+......+.+.-...+...+-+..... ...+..+
T Consensus 220 ~~~~~~~tqS~HK~l~-alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~------~G~~l~~ 292 (557)
T COG1982 220 NGGADFVTQSTHKLLA-ALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVARMQEGN------AGRELWQ 292 (557)
T ss_pred hcCceEEEechhhhhh-hhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhh------hhHHHHH
Confidence 2456888999999875 443445565553 111345555544333333322222222221111111 1233334
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCCCC--------cccccccccCCCCCceEEeecCc---cHHHHHHHHHhCCEEe
Q 012785 352 FTNHQMSTRWKQLRMAVQKSGLFSVPELPS--------QFCTFLGRAFEPQPAFAWLKCEQ---EIEDCESFLKGNKILT 420 (456)
Q Consensus 352 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~~l~~~gI~v 420 (456)
+..+..-+.|+.+.+.....+++.+..+.- ||-.+-+..+--++.=+.+..++ ....+...|+++||..
T Consensus 293 ~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e~gii~ 372 (557)
T COG1982 293 EVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLREHGIIP 372 (557)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHHHcCCee
Confidence 444555556666666666665444433321 01000000000111113333322 5678899999999987
Q ss_pred ecCC
Q 012785 421 RSGK 424 (456)
Q Consensus 421 ~pg~ 424 (456)
.-..
T Consensus 373 e~~~ 376 (557)
T COG1982 373 EETG 376 (557)
T ss_pred eecC
Confidence 7633
No 367
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.58 E-value=1.8e-05 Score=78.78 Aligned_cols=314 Identities=12% Similarity=0.105 Sum_probs=176.7
Q ss_pred CCCCeEEecCCCCCC-CchhHhhhcccccccccCccccccccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEcc
Q 012785 92 GGERIINVDHGDPTM-YEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGT 170 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~-~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~ 170 (456)
+.+-.|||-+..-+- +++. ++.+ +..+.+ .|..+.. ...|++.++++++. +.++.|.
T Consensus 39 s~dV~IDLrSDTgT~apS~~-m~aA-----M~~GDD---~Y~gdpS-----v~~Lee~vael~G~--------E~alpth 96 (467)
T TIGR02617 39 SEDVFIDLLTDSGTGAVTQS-MQAA-----MMRGDE---AYSGSRS-----YYALAESVKNIFGY--------QYTIPTH 96 (467)
T ss_pred CCCeEEECccCCCCCCCCHH-HHHH-----HHcCCc---ccccCch-----HHHHHHHHHHHhCC--------ceEEECC
Confidence 334568886655442 3332 2221 222322 3655544 48999999999974 4688887
Q ss_pred CHHHHHHHHHHHhcC-CCCCCCcEEEEeCC--------CCCChhhhhhhcCCeEeeec----------------cCcccc
Q 012785 171 GSTQLFQAALYALSS-QDASEPISVVSAAP--------YYSSYPSITDCVKSRLYKWA----------------GDAKRF 225 (456)
Q Consensus 171 G~~~al~~~~~~l~~-~gd~~~~~Vlv~~P--------~y~~~~~~~~~~g~~~~~~~----------------~d~~~l 225 (456)
.+..+-.+++..+++ +|+ ++++..+ .|......+...|+....+. +|.+.+
T Consensus 97 qGRgaE~Il~~~~~~~~g~----e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~l 172 (467)
T TIGR02617 97 QGRGAEQIYIPVLIKKREQ----EKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGL 172 (467)
T ss_pred CCchHHHHHHHhhcccccc----cccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHH
Confidence 778888899989888 677 6775553 12222334566777655431 233333
Q ss_pred cc-------CCCeEEEEcCCCCCC-cccch--------HHhhhcCcEEEeee------cCC----CCCCCCCC--C----
Q 012785 226 NK-------DGPYIELVTSPNNPD-GSVRQ--------SVVNRSGGILVHDL------AYY----WPQYTSIT--Y---- 273 (456)
Q Consensus 226 ~~-------~~~~~i~v~~P~NPt-G~~~~--------~l~~~~~~~iI~De------~y~----~~~~~~~~--~---- 273 (456)
+. .+.-.+.+.--+|-. |.++| ++|+++|+.++.|- +|. ++.+.... .
T Consensus 173 e~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE 252 (467)
T TIGR02617 173 ERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRE 252 (467)
T ss_pred HHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHH
Confidence 21 111122111113433 66766 38999999999995 331 12222221 1
Q ss_pred -CCCCcEEEecCccccCCC-CceEEEEEEeCH---HHHHHHHHHHh----h-ccCcCChHHHHHHHHHHHhhhCCCCCCC
Q 012785 274 -PADHDLMLFTVSKSTGHA-GTRIGWALVKDM---EVAKKMTKYIE----L-NTIGVSKDSQLRAAKVLKVVSDSCKPSG 343 (456)
Q Consensus 274 -~~~~~i~i~S~SK~~g~~-G~RiG~l~~~~~---~~~~~l~~~~~----~-~~~~~s~~~q~~a~~~L~~~~~~~~~~~ 343 (456)
...-+.+..|+||.+|.| | |+++++++ ++.++++...- + +..|.+.-...+++..|....
T Consensus 253 ~~~~aDsvt~slsKglgApvG---g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~------- 322 (467)
T TIGR02617 253 TYKYADMLAMSAKKDAMVPMG---GLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGM------- 322 (467)
T ss_pred hhccCCEEEEEcCCCCCCccc---ceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcc-------
Confidence 123367788999988866 4 57777777 44444444211 1 233566666666666666321
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc----cHHHHHHHHHhCCEE
Q 012785 344 SEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ----EIEDCESFLKGNKIL 419 (456)
Q Consensus 344 ~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~----~~~~~~~~l~~~gI~ 419 (456)
.+++++....+. ++|.+.|.+.+ +.++. .||.+-|++--. ++..+|. ......++..+.||-
T Consensus 323 --~~~yl~~ri~qv----~yl~~~L~~~G-vpi~~-~Gghav~iDa~~------~lphip~~~fpa~al~~~ly~~~GiR 388 (467)
T TIGR02617 323 --NLDWLAYRINQV----QYLVNGLEEIG-VVCQQ-AGGHAAFVDAGK------LLPHIPADQFPAHALACELYKVAGIR 388 (467)
T ss_pred --cHHHHHHHHHHH----HHHHHHHHhCC-CcEEe-cCccEEEEehhh------hCCCCChhhCcHHHHHHHHHHHcCcc
Confidence 245554444333 45666777665 44555 777754322100 0111221 234566777889997
Q ss_pred eecCCCC--CC----------CCCeEEEEecC---ChhHHHHHHHHHHhhh
Q 012785 420 TRSGKHF--GF----------SPKYVRISMLD---RDENYNLFVQRLSKIL 455 (456)
Q Consensus 420 v~pg~~f--g~----------~~~~iRis~~~---~~e~i~~~l~~L~~~l 455 (456)
..--..+ +. .-..+|+++.+ +.+.++...++|..+.
T Consensus 389 ~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~ 439 (467)
T TIGR02617 389 AVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVK 439 (467)
T ss_pred eEeecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHH
Confidence 5433222 21 12579999875 8899999999988764
No 368
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=98.56 E-value=7.1e-08 Score=92.49 Aligned_cols=165 Identities=18% Similarity=0.180 Sum_probs=112.1
Q ss_pred cccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChh---h
Q 012785 130 YFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYP---S 206 (456)
Q Consensus 130 ~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~---~ 206 (456)
.|+.... ..+|++.++++++. +..+++++++.+..+++++++.+++ .|++..+++.... .
T Consensus 24 ~Yg~D~~-----~~~l~~~i~~l~g~--------e~a~f~~sGT~An~~al~~~~~~~~----~vi~~~~aHi~~~E~ga 86 (290)
T PF01212_consen 24 AYGEDPT-----TARLEERIAELFGK--------EAALFVPSGTMANQLALRAHLRPGE----SVICADTAHIHFDETGA 86 (290)
T ss_dssp CTTSSHH-----HHHHHHHHHHHHTS--------SEEEEESSHHHHHHHHHHHHHHTTE----EEEEETTEHHHHSSTTH
T ss_pred ccCCChh-----HHHHHHHHHHHcCC--------CEEEEeCCCChHHHHHHHHHHhcCC----ceeccccceeeeeccch
Confidence 3666544 48999999999974 3667899999999999999999998 8999998654322 2
Q ss_pred hhhhcCCeEeeeccCc------ccccc---------CCCeEEEEcCCCCCC-cccch--------HHhhhcCcEEEeeec
Q 012785 207 ITDCVKSRLYKWAGDA------KRFNK---------DGPYIELVTSPNNPD-GSVRQ--------SVVNRSGGILVHDLA 262 (456)
Q Consensus 207 ~~~~~g~~~~~~~~d~------~~l~~---------~~~~~i~v~~P~NPt-G~~~~--------~l~~~~~~~iI~De~ 262 (456)
.....|.+++.++.+. +.++. .++++|.+++|+|-. |.+++ ++|+++|+.+..|-+
T Consensus 87 ~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGA 166 (290)
T PF01212_consen 87 IEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGA 166 (290)
T ss_dssp HHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEET
T ss_pred hhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehh
Confidence 2355789888776443 33321 246899999999975 66776 389999999999987
Q ss_pred CCCCCC----CCCCC-CCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHh
Q 012785 263 YYWPQY----TSITY-PADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIE 314 (456)
Q Consensus 263 y~~~~~----~~~~~-~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~ 314 (456)
-.+... .++.. ...-+++..|++|.+|+++ |-+++.+++++++....+.
T Consensus 167 Rl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~---Gavl~~~~~~i~~~~~~~k 220 (290)
T PF01212_consen 167 RLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPG---GAVLAGNKEFIAKARRQRK 220 (290)
T ss_dssp THHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSS---EEEEEESHHHHHHHHHHHH
T ss_pred hHHHhhhcccccHHHHhhhCCEEEEEEEccccccc---ceEEEechHHHHHHHHHHH
Confidence 542100 00110 1234688889999988775 6666666887666555443
No 369
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.45 E-value=5.5e-05 Score=71.12 Aligned_cols=277 Identities=12% Similarity=0.037 Sum_probs=166.0
Q ss_pred HHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCC--CCCCCcEEEEeC-CCCCC----hhhhhhhcCCeE
Q 012785 143 PEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQ--DASEPISVVSAA-PYYSS----YPSITDCVKSRL 215 (456)
Q Consensus 143 ~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~--gd~~~~~Vlv~~-P~y~~----~~~~~~~~g~~~ 215 (456)
..|-..+|.+++. .+.+++++.+++--++.++.+.+++ |+ +|++++ -+|+. ...+++.++...
T Consensus 79 ~~lgdklApLiGA------~~~Evvv~dtts~nl~k~L~aalr~~~~r----~vIv~E~~~fpTdly~a~g~~~~~~~~~ 148 (407)
T COG3844 79 ERLGDKLAPLIGA------RAGEVVVTDTTSINLFKVLAAALRPQEGR----RVIVSEGDNFPTDLYIAEGLADLLGIGY 148 (407)
T ss_pred hHHHHHhhhhhcC------CCCceEEeCCcchHHHHHHHHHhccCCCc----eEEeecCCCCCcchhhhcchhhhhcccc
Confidence 3455556666654 4678999999998888888877553 55 566554 44443 223344444221
Q ss_pred -eeeccCccccc---cCCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCcc
Q 012785 216 -YKWAGDAKRFN---KDGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSK 286 (456)
Q Consensus 216 -~~~~~d~~~l~---~~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK 286 (456)
+....+++.++ .+++.+++++..|.-||..+. .++.+++++++-|-+++-....--....+-++-|++--|
T Consensus 149 ~~~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyK 228 (407)
T COG3844 149 DLEGVIAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYK 228 (407)
T ss_pred cceeeeChHHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeece
Confidence 11111222332 346678889889999999976 478999999999999874222211234455777888888
Q ss_pred cc-CCCCceEEEEEEeCHHHHHHHHHH-----------------------HhhccCcCChHHHHHHHHHHHhhhCCCCCC
Q 012785 287 ST-GHAGTRIGWALVKDMEVAKKMTKY-----------------------IELNTIGVSKDSQLRAAKVLKVVSDSCKPS 342 (456)
Q Consensus 287 ~~-g~~G~RiG~l~~~~~~~~~~l~~~-----------------------~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~ 342 (456)
.+ |-||-. +++.+. ++..++.... ..+.....+..+..+....|+...+
T Consensus 229 YLNgGPGap-a~l~v~-~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~----- 301 (407)
T COG3844 229 YLNGGPGAP-AGLFVA-PRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFAD----- 301 (407)
T ss_pred eccCCCCCc-eeEEec-cccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhh-----
Confidence 77 336654 344443 3333322111 1112233444455555555553222
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhc-C--CccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEE
Q 012785 343 GSEDECFFEFTNHQMSTRWKQLRMAVQKS-G--LFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKIL 419 (456)
Q Consensus 343 ~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~--~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~ 419 (456)
--+.++|++--..-+++.+.++.. + .+++..|... ...|..+-+..+ ....+.+.|.++||.
T Consensus 302 -----~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~---------~~rGsqvS~~hp-~~~~V~qaLi~rGVi 366 (407)
T COG3844 302 -----VDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAH---------EERGSQVSLYHP-HGYQVMQALIDRGVI 366 (407)
T ss_pred -----cCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchh---------hhccceeeEecC-cHHHHHHHHHHcCcc
Confidence 125566666666677777777654 2 3444444321 122333444444 577899999999998
Q ss_pred eecCCCCCCCCCeEEEEecC---ChhHHHHHHHHHHhhhC
Q 012785 420 TRSGKHFGFSPKYVRISMLD---RDENYNLFVQRLSKILS 456 (456)
Q Consensus 420 v~pg~~fg~~~~~iRis~~~---~~e~i~~~l~~L~~~l~ 456 (456)
.-- ..++.+|+.++. +-+++=.+++.|.++|+
T Consensus 367 gD~-----R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~ 401 (407)
T COG3844 367 GDF-----REPDVLRFGFTPLYVSFVDVWDAVDALEEVLD 401 (407)
T ss_pred ccc-----cCCCeeeecCccceechhHHHHHHHHHHHHHH
Confidence 532 248999999874 77888889999888874
No 370
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.34 E-value=0.00014 Score=79.24 Aligned_cols=266 Identities=13% Similarity=0.069 Sum_probs=154.2
Q ss_pred HHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhc-C--CCCCCCcEEEEeCCCCCChhhhhh----hcCCeEe
Q 012785 144 EFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALS-S--QDASEPISVVSAAPYYSSYPSITD----CVKSRLY 216 (456)
Q Consensus 144 ~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~-~--~gd~~~~~Vlv~~P~y~~~~~~~~----~~g~~~~ 216 (456)
+++..++++.+. +..+.-+-.+++.+.++++.+.. . .++ +|++++-.+|.+....+ ..|.+++
T Consensus 113 e~Qt~i~eLtGm------~~aNaSl~d~atA~aEa~~~a~~~~~~~~~----~vlv~~~~hP~~~~v~~t~a~~~g~~v~ 182 (939)
T TIGR00461 113 NFQTVVSDLTGL------PVANASLLDEGTAAAEAMALSFNVSKKKAN----KFFVAKDLHPQTKSVLHTRAKPFGIEVI 182 (939)
T ss_pred HHHHHHHHHHCC------ChhhhhccchhhHHHHHHHHHHHhhcCCCC----EEEECCCCCcchHHHHHHHHHhcCcEEE
Confidence 344445555443 23355677778887777766642 2 224 89999999998886555 6788888
Q ss_pred eeccCccccccC-CCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCccccCC
Q 012785 217 KWAGDAKRFNKD-GPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKSTGH 290 (456)
Q Consensus 217 ~~~~d~~~l~~~-~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~g~ 290 (456)
.++. +.++.. ++.++++.+|+. .|.+.+ +++++.|.++|.+--........-+...+-+|+++ -+|.||+
T Consensus 183 ~~~~--~~l~~~~~~~~v~~q~Pn~-~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg-~~q~fg~ 258 (939)
T TIGR00461 183 VVDC--SDIKKAVDVFGCLLQYPAT-DGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLG-SSQRFGV 258 (939)
T ss_pred EEcH--HHHhhcCCEEEEEEECCCC-CeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEee-CCCccCC
Confidence 7654 345433 567788888864 688754 36778899998853111100000112234456644 3343443
Q ss_pred C----CceEEEEEEeCHHHHHHH----------------------------HHHHhhccCcCChHHHHHHHHHHHhhhCC
Q 012785 291 A----GTRIGWALVKDMEVAKKM----------------------------TKYIELNTIGVSKDSQLRAAKVLKVVSDS 338 (456)
Q Consensus 291 ~----G~RiG~l~~~~~~~~~~l----------------------------~~~~~~~~~~~s~~~q~~a~~~L~~~~~~ 338 (456)
| |=-.|++.++ +++...+ ++-+..++.+.+.......+.+.-.. .+
T Consensus 259 p~g~GGP~aG~~a~~-~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~-~G 336 (939)
T TIGR00461 259 PMGYGGPHAAFFAVK-DEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVY-HG 336 (939)
T ss_pred CCCCCCCceeeeeec-HhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHH-HC
Confidence 1 2226666665 4444332 11111112222222222111211111 12
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecC-ccHHHHHHHHHhCC
Q 012785 339 CKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE-QEIEDCESFLKGNK 417 (456)
Q Consensus 339 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~g 417 (456)
.+-++++.++...+..++.+.|++.+ +++..+ .||+ =+.++++ .+.+.+.+.+.++|
T Consensus 337 --------~~GL~~iA~~~~~~a~~l~~~L~~~G-~~~~~~-----~fF~--------~~~v~~~~~~~~~i~~~~~~~g 394 (939)
T TIGR00461 337 --------PKGLKNIARRIHSLTSILANGLENDP-HELINK-----TWFD--------TLTVKVGNGISSELLKAAEEFN 394 (939)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCC-----Cccc--------eEEEEeCCCCHHHHHHHHHHCC
Confidence 56677888888888889999998854 444332 1222 1445554 35678889999999
Q ss_pred EEeecCCCCCCCCCeEEEEecC--ChhHHHHHHHHHH
Q 012785 418 ILTRSGKHFGFSPKYVRISMLD--RDENYNLFVQRLS 452 (456)
Q Consensus 418 I~v~pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L~ 452 (456)
|.++. ..++.+++|+.- ++++++.+++.+.
T Consensus 395 i~l~~-----~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 395 INLRA-----VDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred Ceeee-----cCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 99776 235689999863 8899999999884
No 371
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=98.31 E-value=0.00012 Score=74.64 Aligned_cols=252 Identities=17% Similarity=0.129 Sum_probs=154.5
Q ss_pred HHHHHHHHHHHHH-hcCccCCCceEEEccCHHHHHHHHHHHhcCCC--------C---CCCcEEEEeCCCCCChhhhhhh
Q 012785 143 PEFAKEVVRLHKV-VGNAITENHHIVVGTGSTQLFQAALYALSSQD--------A---SEPISVVSAAPYYSSYPSITDC 210 (456)
Q Consensus 143 ~~lr~aia~~~~~-~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~g--------d---~~~~~Vlv~~P~y~~~~~~~~~ 210 (456)
.++.+.+..++.. .+.+ . .-.=.+|+|+|+++.+++.+..... . ..| +|+++.-.+..+...++.
T Consensus 100 ~~~E~~~v~~l~~l~~~~-~-~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P-~ii~s~~aH~s~~Kaa~~ 176 (460)
T COG0076 100 AELEERVVNMLSDLLGAP-E-EASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKP-NIVCSETAHFSFEKAARY 176 (460)
T ss_pred HHHHHHHHHHHHHHhCCC-C-CCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCC-eEEecCcchhHHHHHHHH
Confidence 7888888888854 4443 2 2245689999999998887663211 0 123 799999999999999999
Q ss_pred cCCeEeeecc-------CccccccC---CCe--EEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCCC--CC--
Q 012785 211 VKSRLYKWAG-------DAKRFNKD---GPY--IELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ--YT-- 269 (456)
Q Consensus 211 ~g~~~~~~~~-------d~~~l~~~---~~~--~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~~--~~-- 269 (456)
+|++...++. |.+.++.. .+. +|+-+-++=|||.+=+ ++|+++++++.+|.+|.+.- +.
T Consensus 177 lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~ 256 (460)
T COG0076 177 LGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEP 256 (460)
T ss_pred hCCCceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCc
Confidence 9988765444 44444321 222 3666677889999733 58999999999999999731 11
Q ss_pred -CC-CCCCCC-cEEEecCccccCCCCceEEEEEEeCHH-HHHHHHHHHhhc--------cCcCChHH-HHHHH-HHHHhh
Q 012785 270 -SI-TYPADH-DLMLFTVSKSTGHAGTRIGWALVKDME-VAKKMTKYIELN--------TIGVSKDS-QLRAA-KVLKVV 335 (456)
Q Consensus 270 -~~-~~~~~~-~i~i~S~SK~~g~~G~RiG~l~~~~~~-~~~~l~~~~~~~--------~~~~s~~~-q~~a~-~~L~~~ 335 (456)
.. ....++ +-+..++.|. |+.-.-.||++.+|++ +.+.+....... +...+..+ +.++. ..+..
T Consensus 257 ~~~~~f~l~~vdSIt~d~HK~-g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~- 334 (460)
T COG0076 257 DGRWDFGLEGVDSITVDGHKY-GLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRR- 334 (460)
T ss_pred cchhhcCCCCceEEEECcccc-cCCCCCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHH-
Confidence 11 122233 3456789995 4577889999999884 444443211111 12222333 22111 22221
Q ss_pred hCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCcc---HHHHHHH
Q 012785 336 SDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQE---IEDCESF 412 (456)
Q Consensus 336 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~---~~~~~~~ 412 (456)
-| .+-++++.++..+..+.+.+.|++.+.+++...+ ..+-+.++.++. .......
T Consensus 335 -lG--------~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p-------------~l~~V~fr~~~~~~~~~~~~~~ 392 (460)
T COG0076 335 -LG--------REGYRKLLDRTLELARYLAEELEKLGDFELVNEP-------------ELPIVAFRLKDDEDTLADLSER 392 (460)
T ss_pred -hC--------HhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCC-------------ccceEEEEcCCcccchhchHHH
Confidence 12 4556677777778889999999998756554422 222466666442 3334444
Q ss_pred HHhCCEEee
Q 012785 413 LKGNKILTR 421 (456)
Q Consensus 413 l~~~gI~v~ 421 (456)
+++.|..+.
T Consensus 393 ~~~~gw~v~ 401 (460)
T COG0076 393 LDRRGWQVP 401 (460)
T ss_pred HHhcCceee
Confidence 544555543
No 372
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.27 E-value=0.0005 Score=63.99 Aligned_cols=255 Identities=15% Similarity=0.118 Sum_probs=148.3
Q ss_pred ceEEEccCHHHHHHHHHHHhcC---CCCCCCcEEEEeCCCCCChhhhhhhc-------CCe-----EeeeccCcccc---
Q 012785 164 HHIVVGTGSTQLFQAALYALSS---QDASEPISVVSAAPYYSSYPSITDCV-------KSR-----LYKWAGDAKRF--- 225 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~---~gd~~~~~Vlv~~P~y~~~~~~~~~~-------g~~-----~~~~~~d~~~l--- 225 (456)
+-++++++++||..++++...+ .. .|++.+-.|++........ |.. .+.+...+|-.
T Consensus 103 svc~F~NSGSEANDLALRLAR~ftkhq-----DvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK 177 (452)
T KOG1403|consen 103 SVCFFVNSGSEANDLALRLARNFTKHQ-----DVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGK 177 (452)
T ss_pred eEEEEecCCchhhHHHHHHHHhhcccC-----ceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccc
Confidence 4678999999999999987643 33 4777788888766543221 110 11111000000
Q ss_pred -------------------cc-------C--CCeEEEEcCCCCCCcccchH---------HhhhcCcEEEeeecCCCCCC
Q 012785 226 -------------------NK-------D--GPYIELVTSPNNPDGSVRQS---------VVNRSGGILVHDLAYYWPQY 268 (456)
Q Consensus 226 -------------------~~-------~--~~~~i~v~~P~NPtG~~~~~---------l~~~~~~~iI~De~y~~~~~ 268 (456)
+. . +..+.+-.+-+.-.|.+++. -.+.+|...|.||++.+.+.
T Consensus 178 ~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGR 257 (452)
T KOG1403|consen 178 FRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGR 257 (452)
T ss_pred cccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccc
Confidence 00 0 11122222233344555542 24568999999999987544
Q ss_pred CCCC----CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHH--HHhhccCcCChHHHHHHHHHHHhhhCCCCCC
Q 012785 269 TSIT----YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTK--YIELNTIGVSKDSQLRAAKVLKVVSDSCKPS 342 (456)
Q Consensus 269 ~~~~----~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~--~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~ 342 (456)
.+-. ...+-+=-|.++.|.+| .|-+++.++.. +++++.+.. ...++++|.+|.+.+++.++++.+++.
T Consensus 258 vG~hyWafq~y~fiPDIVtmgKpmG-NGhPVa~Vatt-keIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E---- 331 (452)
T KOG1403|consen 258 VGSHYWAFQTYNFIPDIVTMGKPMG-NGHPVAAVATT-KEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDE---- 331 (452)
T ss_pred cchhhhhhhhhccccchheecccCC-CCCeeeEEecc-HHHHHHhccccceehhccCCCchhHHHHHHHHHHHhhh----
Confidence 3321 11121112667999999 99999999996 999998876 345679999999999999999976543
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhc----CCccccCCCCcccccccccCCCCCceEEeec-Cc------cH---HH
Q 012785 343 GSEDECFFEFTNHQMSTRWKQLRMAVQKS----GLFSVPELPSQFCTFLGRAFEPQPAFAWLKC-EQ------EI---ED 408 (456)
Q Consensus 343 ~~~~~~~l~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~-~~------~~---~~ 408 (456)
.+.++-++..+.|...|+++ +.+--.+.-| .|+-+++ ++ +. ..
T Consensus 332 ---------~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvG--------------LFiGIdLVkD~~tRtP~tk~A~~ 388 (452)
T KOG1403|consen 332 ---------NLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVG--------------LFIGIDLVKDRKTRTPDTKEAHW 388 (452)
T ss_pred ---------hHHHHHHHHHHHHHHHHHHHhhhccceeccccce--------------EEEeeeeecccccCCCcHHHHHH
Confidence 23333344444555555443 2221122222 2677765 21 11 22
Q ss_pred -HHHHHHhCCEEeecCCCCCCCCCeEEEE--ecCChhHHHHHHHHHHhhh
Q 012785 409 -CESFLKGNKILTRSGKHFGFSPKYVRIS--MLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 409 -~~~~l~~~gI~v~pg~~fg~~~~~iRis--~~~~~e~i~~~l~~L~~~l 455 (456)
+.++-+.++|++..- |+..+.+.|- ++-++|+.++.+..|.++|
T Consensus 389 ~v~rlke~y~VLlsaD---GPh~NilKiKPPmCFneena~e~v~~ld~iL 435 (452)
T KOG1403|consen 389 VVNRLKELYRVLLSAD---GPHRNILKIKPPMCFNEENADEFVLGLDEIL 435 (452)
T ss_pred HHHHHHHhhhEEEecC---CCCCceeecCCCcccChhhHHHHHHHHHHHH
Confidence 333444577888652 2345555554 3337888888888887765
No 373
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.25 E-value=1.5e-05 Score=76.49 Aligned_cols=272 Identities=13% Similarity=0.136 Sum_probs=163.3
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc-
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG- 220 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~- 220 (456)
+.+|.+.||++++. ++.|+...|- .++..++.++++.|| -|.+.+-.-.......+....+++.|..
T Consensus 141 HldlE~~iakF~G~-------E~aivYs~gF-~ti~S~ipafsKrGD----Ii~~de~~nfaIq~GlqlSRS~i~~Fkhn 208 (467)
T KOG1358|consen 141 HLDLEKRIAKFMGT-------EDAIVYSYGF-STIESAIPAFSKRGD----IIFVDEAVNFAIQKGLQLSRSTISYFKHN 208 (467)
T ss_pred ecccHHHHHHhhCC-------cceeeecccc-chhhhcchhhhccCc----EEEEehhhhHHHHHHHhhhhheeEEecCC
Confidence 57899999999985 5688888776 567778889999999 7777777666677777777767666653
Q ss_pred Ccccccc-----C----------CC-eEEEEcCCCCCCcccch--H---HhhhcCcEEEeeecCCCC----CCCCCC---
Q 012785 221 DAKRFNK-----D----------GP-YIELVTSPNNPDGSVRQ--S---VVNRSGGILVHDLAYYWP----QYTSIT--- 272 (456)
Q Consensus 221 d~~~l~~-----~----------~~-~~i~v~~P~NPtG~~~~--~---l~~~~~~~iI~De~y~~~----~~~~~~--- 272 (456)
|.++++. . .+ +.|++.----+||...+ + +..+|...+|.||.|+.. .-.++.
T Consensus 209 dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~ 288 (467)
T KOG1358|consen 209 DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHF 288 (467)
T ss_pred CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccC
Confidence 3333311 0 11 34444444556888766 3 667899999999999831 112222
Q ss_pred --CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHH---HhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcch
Q 012785 273 --YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKY---IELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDE 347 (456)
Q Consensus 273 --~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~---~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~ 347 (456)
...+-+++++|++-+++-.| |+.++. .++-...+. ........++....+|...+..+... .
T Consensus 289 ~v~~~~iDiv~~sm~~alas~G---gFc~G~--~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~--------p 355 (467)
T KOG1358|consen 289 GVPITDIDIVTASMETALASGG---GFCAGK--SFIADHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWN--------P 355 (467)
T ss_pred CCCccceeeeeecccccccccC---ceeecc--eeeEeeeeccccceeeeccCchhhhhhHHHHHHHHhhC--------c
Confidence 23456899999999987555 777663 333222222 22123344555555555555543222 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-------c---HHHHHHHHHhCC
Q 012785 348 CFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-------E---IEDCESFLKGNK 417 (456)
Q Consensus 348 ~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-------~---~~~~~~~l~~~g 417 (456)
.+.+.++.....+...|+....+.+.... ....+.+.+.. + .+.+.+.+...|
T Consensus 356 ----~~~~~L~~k~~~~H~~l~~~s~~~v~~~~-------------~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~ 418 (467)
T KOG1358|consen 356 ----EIVQPLRAKVAKFHAALSSNSGFIVSGSP-------------ESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEG 418 (467)
T ss_pred ----chhhhhhccccccchhhhcCCceEEecCc-------------CCceeeeeecccccchHHHHHHHHHHHHHHHhhc
Confidence 24445556556666777765444443211 11123344422 1 122333333347
Q ss_pred EEeecCCCC-C----CCCCeEEEEecC--ChhHHHHHHHHHHhhh
Q 012785 418 ILTRSGKHF-G----FSPKYVRISMLD--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 418 I~v~pg~~f-g----~~~~~iRis~~~--~~e~i~~~l~~L~~~l 455 (456)
+++.-...- + .-+..+||++.. ++|+++.+.+.|+++.
T Consensus 419 ~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~ 463 (467)
T KOG1358|consen 419 VLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVA 463 (467)
T ss_pred ceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 777643322 1 135579999875 8999999999998763
No 374
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=97.93 E-value=0.0013 Score=65.89 Aligned_cols=246 Identities=13% Similarity=0.128 Sum_probs=125.2
Q ss_pred EccCHHHHHHHHHHHh---cCCCCCCCcEEEEeCCCCCChhhhhhh----cCCeEeeeccCcccccc-CCCeEEEEcCCC
Q 012785 168 VGTGSTQLFQAALYAL---SSQDASEPISVVSAAPYYSSYPSITDC----VKSRLYKWAGDAKRFNK-DGPYIELVTSPN 239 (456)
Q Consensus 168 ~t~G~~~al~~~~~~l---~~~gd~~~~~Vlv~~P~y~~~~~~~~~----~g~~~~~~~~d~~~l~~-~~~~~i~v~~P~ 239 (456)
+-.|++.+-++++.+. .+..+ +|+++.-.++.+....+. .|.+++.++.+.++... +++.++++.+||
T Consensus 132 lyd~atA~aEa~~ma~r~~~~~~~----~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d~~~~a~v~vq~Pn 207 (429)
T PF02347_consen 132 LYDGATAAAEAMLMAVRATKRKRN----KVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTDDDDTAAVMVQNPN 207 (429)
T ss_dssp BSSCCHHHHHHHHHHHHHHTT-------EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB-STTEEEEEEESS-
T ss_pred CCChhHHHHHHHHHHHHhcccCCc----EEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCccccCeEEEEeecCC
Confidence 4456665555554443 22334 899999999998885444 68888888877655543 577899999997
Q ss_pred CCCcccch-----HHhhhcCcEEEeeecCCCCC-CCCCC--CCCCCcEEEecCccccCCC----CceEEEEEEeCHHHHH
Q 012785 240 NPDGSVRQ-----SVVNRSGGILVHDLAYYWPQ-YTSIT--YPADHDLMLFTVSKSTGHA----GTRIGWALVKDMEVAK 307 (456)
Q Consensus 240 NPtG~~~~-----~l~~~~~~~iI~De~y~~~~-~~~~~--~~~~~~i~i~S~SK~~g~~----G~RiG~l~~~~~~~~~ 307 (456)
. .|.+-+ ++++++|.++|. ..++- ...+. ...+-+|++++ +|.||+| |=-.|++.++ +++..
T Consensus 208 ~-~G~~ed~~~i~~~~h~~gal~~~---~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~-~~l~r 281 (429)
T PF02347_consen 208 T-FGVFEDIKEIADIAHAAGALVIV---GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVR-EDLVR 281 (429)
T ss_dssp T-TSB--THHHHHHHHHHTT-EEEE---CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE--GGGGG
T ss_pred C-CceEeeHHHHHHHHHHcCCEEEE---ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEh-hhhhh
Confidence 5 566644 467889988875 23321 11121 23345777776 8877654 2236777776 44443
Q ss_pred HH----------------------------HHHHhhccCcCChHHHH-HHHHHHHhhhCCCCCCCCcchhHHHHHHHHHH
Q 012785 308 KM----------------------------TKYIELNTIGVSKDSQL-RAAKVLKVVSDSCKPSGSEDECFFEFTNHQMS 358 (456)
Q Consensus 308 ~l----------------------------~~~~~~~~~~~s~~~q~-~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~ 358 (456)
.+ ++-+..+.++.+.-... ++...+.. - ..+-++++-+...
T Consensus 282 ~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~--~--------G~~GL~~iA~~~~ 351 (429)
T PF02347_consen 282 QLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAY--L--------GPEGLREIAERIH 351 (429)
T ss_dssp GS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHH--H--------HHHHHHHHHHHHH
T ss_pred hCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHH--h--------CHHHHHHHHHHHH
Confidence 32 11111233444433322 22222221 2 2677888999999
Q ss_pred HHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEe
Q 012785 359 TRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGNKILTRSGKHFGFSPKYVRISM 437 (456)
Q Consensus 359 ~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~ 437 (456)
.+..++.+.|++.....+. .. .|++ |+....+. ..+.+.+.....|+.... ...+.+-+++
T Consensus 352 ~~A~yl~~~L~~~~~~~~~--~~---~f~e--------~v~~~~~~~~~~~l~~~~~~~gl~~~~-----~~~~~~li~~ 413 (429)
T PF02347_consen 352 LNAHYLAERLKKIYGLPFD--NP---FFFE--------FVVVFSKDKEVEELLKRGIEGGLNLRY-----PDDGALLICV 413 (429)
T ss_dssp HHHHHHHHHHCCTTBECSS--SS---SBSS--------EEEEESS-HHHHHHHHTT----EEEGG-----G-SSEEEEE-
T ss_pred HHHHHHHHHHHHhcCcccC--CC---Ccee--------eeeecCCcHHHHHHHHHHHhcCCCccc-----cCCCeEEEEc
Confidence 9999999999886222222 11 2232 45555442 122233333344533321 2345777887
Q ss_pred cC--ChhHHHHHHHHH
Q 012785 438 LD--RDENYNLFVQRL 451 (456)
Q Consensus 438 ~~--~~e~i~~~l~~L 451 (456)
.- ++|+|+.+++.|
T Consensus 414 TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 414 TETRTKEDIDRLVEAF 429 (429)
T ss_dssp -TT--HHHHHHHHH--
T ss_pred cCCCCHHHHHHHHhcC
Confidence 63 788888888754
No 375
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=97.92 E-value=0.00084 Score=67.06 Aligned_cols=225 Identities=16% Similarity=0.125 Sum_probs=136.4
Q ss_pred HHHHHHHHHHHH-HhcCccCC----CceEEEccCHHHHHHHHHHHhcC--------CCC--CCCcEEEEeCCCCCChhhh
Q 012785 143 PEFAKEVVRLHK-VVGNAITE----NHHIVVGTGSTQLFQAALYALSS--------QDA--SEPISVVSAAPYYSSYPSI 207 (456)
Q Consensus 143 ~~lr~aia~~~~-~~g~~~~~----~~~I~~t~G~~~al~~~~~~l~~--------~gd--~~~~~Vlv~~P~y~~~~~~ 207 (456)
.++++.+.+|+. ..|.+... ...=++|+|+++++..++.+... .|. ..+..|++.+-++......
T Consensus 78 ~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Ka 157 (373)
T PF00282_consen 78 TEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKA 157 (373)
T ss_dssp HHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHH
T ss_pred ccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHh
Confidence 678888888884 46666221 13567899999999877765532 111 1122677777788889999
Q ss_pred hhhcCCeEeeeccCccc------ccc------CC---CeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecCCCC-
Q 012785 208 TDCVKSRLYKWAGDAKR------FNK------DG---PYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWP- 266 (456)
Q Consensus 208 ~~~~g~~~~~~~~d~~~------l~~------~~---~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~- 266 (456)
+..+|+.++.++.|.++ +++ .+ +-+|+.+-..-.||.+=+ ++|+++++|+-+|-+|.+.
T Consensus 158 a~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~ 237 (373)
T PF00282_consen 158 ARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSA 237 (373)
T ss_dssp HHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGG
T ss_pred cceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccccc
Confidence 99999999888776532 322 12 334555566777888733 4899999999999999972
Q ss_pred ----CCCCCCCCCCC-cEEEecCccccCCCCceEEEEEEeCHHHHHHHH----HHHh-------------hccCcCChHH
Q 012785 267 ----QYTSITYPADH-DLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMT----KYIE-------------LNTIGVSKDS 324 (456)
Q Consensus 267 ----~~~~~~~~~~~-~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~----~~~~-------------~~~~~~s~~~ 324 (456)
.+......-++ +=+..++.|.++ .-...|+++.+++....... .+.. ..++..|. .
T Consensus 238 ~~~~~~~~~~~gi~~adSit~d~HK~l~-~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~ 315 (373)
T PF00282_consen 238 LLSPEYRHLLFGIERADSITIDPHKWLG-VPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSR-R 315 (373)
T ss_dssp GGHCTTGGGGTTGGGESEEEEETTTTTS--SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG-H
T ss_pred cccccccccccccccccccccchhhhhc-CCccceeEEeecccchHHHhccChhhhcccccccccccccccccccccc-c
Confidence 22222222222 455678999887 55789999998765443221 1111 01233444 2
Q ss_pred HHHHHHHHHhhh-CCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccC
Q 012785 325 QLRAAKVLKVVS-DSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPE 378 (456)
Q Consensus 325 q~~a~~~L~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 378 (456)
..++...+. +. -| .+-+++..++..+..+.+.+.|++.+.+++..
T Consensus 316 ~~alk~w~~-l~~~G--------~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~ 361 (373)
T PF00282_consen 316 FRALKLWAT-LKSLG--------REGYRERIRRCIELARYLADRLRKDPRFELVN 361 (373)
T ss_dssp HHHHHHHHH-HHHHH--------HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESS
T ss_pred chHHHHHHH-HHhcC--------HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEc
Confidence 222222111 11 12 45667777777888899999999987766654
No 376
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=97.72 E-value=0.057 Score=53.28 Aligned_cols=250 Identities=14% Similarity=0.118 Sum_probs=145.5
Q ss_pred EccCHHHHHHHHHHHhcCC---CCCCCcEEEEeCCCCCChhhhhhh----cCCeEeeeccC-cccccc---CCCeEEEEc
Q 012785 168 VGTGSTQLFQAALYALSSQ---DASEPISVVSAAPYYSSYPSITDC----VKSRLYKWAGD-AKRFNK---DGPYIELVT 236 (456)
Q Consensus 168 ~t~G~~~al~~~~~~l~~~---gd~~~~~Vlv~~P~y~~~~~~~~~----~g~~~~~~~~d-~~~l~~---~~~~~i~v~ 236 (456)
.-.|+|.+-++++.+..-. .. +|+++.-.|+.+....+. +|.+++..+.| .+.++. ..+.++++.
T Consensus 142 m~DeaTAaAEAm~ma~r~~k~k~~----~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~~~~~~~gv~vQ 217 (450)
T COG0403 142 MLDEATAAAEAMLMAKRVTKKKRN----KFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESADDGDVFGVLVQ 217 (450)
T ss_pred hhhhHHHHHHHHHHHHHhhcCcCc----eEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhhhhccccCeEEEEEe
Confidence 4455666555555554322 24 899999999999888765 35666655443 333332 255788888
Q ss_pred CCCCCCcccchH------HhhhcCcEEEeeecCCCCCCCCC---CCCCCCcEEEecCccccCC----CCceEEEEEEeCH
Q 012785 237 SPNNPDGSVRQS------VVNRSGGILVHDLAYYWPQYTSI---TYPADHDLMLFTVSKSTGH----AGTRIGWALVKDM 303 (456)
Q Consensus 237 ~P~NPtG~~~~~------l~~~~~~~iI~De~y~~~~~~~~---~~~~~~~i~i~S~SK~~g~----~G~RiG~l~~~~~ 303 (456)
+|+ -.|...++ .++.++.++|+ +.++--..+ |...+-+|++++-.- ||+ .|=..||..+. +
T Consensus 218 yP~-~~G~~~~d~~~l~~~~h~~~al~~v---~aDplaL~LL~pPGe~GADIvvG~~Qr-fGvPmgfGGPhag~fA~~-~ 291 (450)
T COG0403 218 YPN-TFGIVEEDLRALIEAAHSAGALVIV---AADPLALGLLKPPGEFGADIVVGSAQR-FGVPMGFGGPHAGYFAVK-D 291 (450)
T ss_pred cCC-CCCccchhHHHHHHHHhhcCCEEEE---EechhHhhccCCccccCCceEEecCcc-cCCCcCCCCcceeeeeEh-H
Confidence 886 46755442 56778887765 333211111 234456888888665 343 35567888886 4
Q ss_pred HHHHH----------------------------HHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHH
Q 012785 304 EVAKK----------------------------MTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNH 355 (456)
Q Consensus 304 ~~~~~----------------------------l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~ 355 (456)
++..+ +++-+..++.|.+......++.+.-+. .| .+-++++.+
T Consensus 292 ~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~-hG--------p~GLk~iA~ 362 (450)
T COG0403 292 EFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVY-HG--------PQGLKEIAE 362 (450)
T ss_pred hHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHH-hC--------hHHHHHHHH
Confidence 44332 222222234454443333333333322 23 567888888
Q ss_pred HHHHHHHHHHHHHHhcC-CccccCCCCcccccccccCCCCCceEEeecC-ccHHHHHHHHHhCCEEeecCCCCCCCCCeE
Q 012785 356 QMSTRWKQLRMAVQKSG-LFSVPELPSQFCTFLGRAFEPQPAFAWLKCE-QEIEDCESFLKGNKILTRSGKHFGFSPKYV 433 (456)
Q Consensus 356 ~~~~~~~~l~~~L~~~~-~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~-~~~~~~~~~l~~~gI~v~pg~~fg~~~~~i 433 (456)
+..+...++.+.|++.+ ++.+.. . . ||+ =+.++++ +..+.+.......|+.++. .+...+
T Consensus 363 r~~~~a~~la~~L~~~~~g~~~~~-~-~---fFd--------t~~v~~~~~~~~~l~~~~~~~G~~L~~-----~~~~~~ 424 (450)
T COG0403 363 RIHRLAAYLAAGLKEIGAGVELVF-D-H---FFD--------TFTVRVPEEVAEALLAAAIAGGINLRR-----VDADTV 424 (450)
T ss_pred HHHHHHHHHHHHHhhcCCceEecc-c-c---cee--------eEEEecchhHHHHHHHHHHhcCCceee-----ecCCce
Confidence 88899999999999654 232221 1 1 221 1555665 3344555566667777765 224455
Q ss_pred EEEecC--ChhHHHHHHHHHHhh
Q 012785 434 RISMLD--RDENYNLFVQRLSKI 454 (456)
Q Consensus 434 Ris~~~--~~e~i~~~l~~L~~~ 454 (456)
=+++.- ++++++.+++.+...
T Consensus 425 ~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 425 LIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred EEEeecccCHHHHHHHHHHHhhh
Confidence 666643 688999999888754
No 377
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=97.57 E-value=0.0027 Score=62.26 Aligned_cols=166 Identities=18% Similarity=0.161 Sum_probs=115.1
Q ss_pred CceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeC-----CCCCChhhhhhhcCCeEeeeccC----cccc---ccCCC
Q 012785 163 NHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAA-----PYYSSYPSITDCVKSRLYKWAGD----AKRF---NKDGP 230 (456)
Q Consensus 163 ~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~-----P~y~~~~~~~~~~g~~~~~~~~d----~~~l---~~~~~ 230 (456)
.+.+++++..+.++.+++.++..++ +|++.. ++.+.....++..|++++.+.-. ..++ ...++
T Consensus 83 aea~~ivnnn~aAVll~~~al~~~~-----EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~tn~t~~~d~~~AIne~t 157 (395)
T COG1921 83 AEAAAIVNNNAAAVLLTLNALAEGK-----EVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTTNRTHLKDYELAINENT 157 (395)
T ss_pred hhheeeECCcHHHHHHHHhhhccCC-----eEEEEccccccCCCCChhHHHHHcCCEEEEecccCcCCHHHHHHHhccCC
Confidence 4678999999999999999988754 454421 57788999999999999976531 1122 12345
Q ss_pred eEEE-EcCCCCCCcccch-----HHhhhcCcEEEeeecCCCC-----CCCCCCCCCCCcEEEecCccccCCCCceEEEEE
Q 012785 231 YIEL-VTSPNNPDGSVRQ-----SVVNRSGGILVHDLAYYWP-----QYTSITYPADHDLMLFTVSKSTGHAGTRIGWAL 299 (456)
Q Consensus 231 ~~i~-v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y~~~-----~~~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~ 299 (456)
++++ +-++|-+--..++ ++++++|+++|.|.+=.+. ..... -..+-+++++|--|.+| |-+-|.++
T Consensus 158 a~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~-la~GaDLV~~SgdKllg--GPqaGii~ 234 (395)
T COG1921 158 ALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREA-LALGADLVSFSGDKLLG--GPQAGIIV 234 (395)
T ss_pred eeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHH-HhcCCCEEEEecchhcC--CCccceEe
Confidence 5443 4344432212222 3789999999999976542 11111 23356899999999875 55689999
Q ss_pred EeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhC
Q 012785 300 VKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSD 337 (456)
Q Consensus 300 ~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~ 337 (456)
+. +++++++++.--.-.+-+..+...+..+.|+....
T Consensus 235 Gk-KelI~~lq~~~l~Ralrv~K~tla~l~~aLe~y~~ 271 (395)
T COG1921 235 GK-KELIEKLQSHPLKRALRVDKETLAALEAALELYLQ 271 (395)
T ss_pred ch-HHHHHHHHhhhhhhhhhcCcHhHHHHHHHHHHHcC
Confidence 97 99999998775545677888888888888886544
No 378
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.38 E-value=0.13 Score=49.74 Aligned_cols=291 Identities=14% Similarity=0.134 Sum_probs=159.8
Q ss_pred cccCCCCcccCCCHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCc-EEEEeCCCCCC-hhhh
Q 012785 130 YFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPI-SVVSAAPYYSS-YPSI 207 (456)
Q Consensus 130 ~y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~-~Vlv~~P~y~~-~~~~ 207 (456)
.|.-..+ +-.|+.++.+.++- +.++.|.=+..|=+++...+.++++..|. +.++++-.|.- ...-
T Consensus 74 AYagsrs-----~~~L~~avkdifGf--------q~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h 140 (471)
T COG3033 74 AYAGSRS-----YYALADAVKDIFGF--------QYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGH 140 (471)
T ss_pred hhccccc-----HHHHHHHHHHhcCc--------eeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHH
Confidence 3777777 58999999998863 57777776666666677777776654332 33444444433 3444
Q ss_pred hhhcCCeEeeec--------------c--Ccccccc-------CCCeEEEEcCCCC-CCcccch--------HHhhhcCc
Q 012785 208 TDCVKSRLYKWA--------------G--DAKRFNK-------DGPYIELVTSPNN-PDGSVRQ--------SVVNRSGG 255 (456)
Q Consensus 208 ~~~~g~~~~~~~--------------~--d~~~l~~-------~~~~~i~v~~P~N-PtG~~~~--------~l~~~~~~ 255 (456)
.+..|+.+..+. . |.+.++. ++.-.|+++--+| -.|+..| ++|++|++
T Consensus 141 ~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~i 220 (471)
T COG3033 141 IQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDI 220 (471)
T ss_pred HHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCC
Confidence 555677665332 2 2223321 2333444433344 4455555 38999999
Q ss_pred EEEeeecCC----------CCCCCC--CCCC-----CCCcEEEecCccccCCCCceEEEEEEeCHH---HHHHHHHHHh-
Q 012785 256 ILVHDLAYY----------WPQYTS--ITYP-----ADHDLMLFTVSKSTGHAGTRIGWALVKDME---VAKKMTKYIE- 314 (456)
Q Consensus 256 ~iI~De~y~----------~~~~~~--~~~~-----~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~---~~~~l~~~~~- 314 (456)
.++.|.+-. ++.|.. +... .--+-...|.-|. |+.-+ -|++...|+. +...++...-
T Consensus 221 pvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD-~lvnm-GGfl~~~D~~~fDvy~~~~~~~V~ 298 (471)
T COG3033 221 PVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKD-GLVNM-GGFLCFKDDSFFDVYEECRTLVVV 298 (471)
T ss_pred cEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeecccc-ceecc-ccEEEecCccHHHHHHHHHhheEe
Confidence 999995432 233322 1100 0012223444453 22211 2677887764 4444444321
Q ss_pred ----hccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccccccccc
Q 012785 315 ----LNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRA 390 (456)
Q Consensus 315 ----~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~ 390 (456)
.+..|.+.-...+.+..|. ++. ..+|++....+ -++|.+.|.+.+ +.+..|.||...|.+-
T Consensus 299 ~eG~~tYGgl~GrdmealAvGL~---e~~------~~~yl~~Rv~Q----v~YL~~~l~~~G-Vpi~~paGGHavfvda- 363 (471)
T COG3033 299 QEGFPTYGGLAGRDMEALAVGLR---EGV------NFDYLAHRVAQ----VQYLADGLEEAG-VPIVQPAGGHAVFVDA- 363 (471)
T ss_pred eccccccCcccchhHHHHHHHHH---Hhc------CcHHHHHHHHH----HHHHHHHHHhcC-CeeEecCCCceEEeeh-
Confidence 1223444445555566665 231 13455444433 356778888876 5577788887432210
Q ss_pred CCCCCceEEeecCc----cHHHHHHHHHhCCEEeecCCCC--CCC----------CCeEEEEecC---ChhHHHHHHHHH
Q 012785 391 FEPQPAFAWLKCEQ----EIEDCESFLKGNKILTRSGKHF--GFS----------PKYVRISMLD---RDENYNLFVQRL 451 (456)
Q Consensus 391 ~~~~~~f~~~~~~~----~~~~~~~~l~~~gI~v~pg~~f--g~~----------~~~iRis~~~---~~e~i~~~l~~L 451 (456)
.- ++..+|. ......++.++.||...--..| +.+ -+.+|+++.+ +.+.++..++.+
T Consensus 364 ----~~-~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~ 438 (471)
T COG3033 364 ----GK-FLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAF 438 (471)
T ss_pred ----hh-hcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHH
Confidence 00 0111221 2345667778999988766555 211 2469999864 788899999888
Q ss_pred Hhhh
Q 012785 452 SKIL 455 (456)
Q Consensus 452 ~~~l 455 (456)
+++.
T Consensus 439 ~~l~ 442 (471)
T COG3033 439 KALK 442 (471)
T ss_pred HHHH
Confidence 8764
No 379
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.36 E-value=0.087 Score=51.04 Aligned_cols=268 Identities=13% Similarity=0.065 Sum_probs=149.9
Q ss_pred HhcCccCCCceEEEc-cCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChh-hhhhhcCC--eEeeec---------cC
Q 012785 155 VVGNAITENHHIVVG-TGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYP-SITDCVKS--RLYKWA---------GD 221 (456)
Q Consensus 155 ~~g~~~~~~~~I~~t-~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~-~~~~~~g~--~~~~~~---------~d 221 (456)
.++.+. .-+|++. .|++.....+...|..... .-.+..-.|.... .-++..+- ++.... .|
T Consensus 62 Ll~iPd--~Y~VlflqGGat~qf~~~p~nLl~~~~----~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~ 135 (365)
T COG1932 62 LLNIPD--DYKVLFLQGGATGQFAMAPMNLLGKRG----TDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPD 135 (365)
T ss_pred HhCCCC--CceEEEEcCccHHHHHHHHHhhhcccC----ceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCC
Confidence 344443 2356554 5667778888888876653 2134444444322 12233332 221110 12
Q ss_pred ccccccCCCeEEEEcCCCCCC-cccchHHhhh-cCcEEEeeecCCCCCCCCCCCCCCCcEEEecCccccCCCCceEEEEE
Q 012785 222 AKRFNKDGPYIELVTSPNNPD-GSVRQSVVNR-SGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKSTGHAGTRIGWAL 299 (456)
Q Consensus 222 ~~~l~~~~~~~i~v~~P~NPt-G~~~~~l~~~-~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~RiG~l~ 299 (456)
.+.++..+..++++-++|+-+ |+-+++.=.. .+.++|.|..-.-.+ .++ +...-+++..+.=|.+|..| ++.++
T Consensus 136 ~~~~~~~~~~ayv~~~~NeTi~Gv~v~~~p~~~~~~~~v~D~SS~ils-r~i-Dvsk~dviyagaQKnlGpaG--ltvvI 211 (365)
T COG1932 136 LSKWDFSDNDAYVHFCWNETISGVEVPELPDIGSDGLLVADASSAILS-RPI-DVSKYDVIYAGAQKNLGPAG--LTVVI 211 (365)
T ss_pred hhhcccCCCccEEEEecCCcccceEccCCCCCCCCceEEEecccHHhc-CCC-ChhHcceEEEehhhccCccc--eEEEE
Confidence 222222221333333455433 7666642111 127888886322110 111 23345788889999999888 88899
Q ss_pred EeCHHHHHHHHHH------------HhhccCc-CChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 012785 300 VKDMEVAKKMTKY------------IELNTIG-VSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRM 366 (456)
Q Consensus 300 ~~~~~~~~~l~~~------------~~~~~~~-~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 366 (456)
+. +++.+++... ....+++ ++.++-+.....++++... .-++.+.++-+++.+.|++
T Consensus 212 vr-~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~---------GGl~~~~~rn~~ka~~LY~ 281 (365)
T COG1932 212 VR-PDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQ---------GGLEALEARNQAKAQLLYD 281 (365)
T ss_pred Ec-HHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHc---------CCHHHHHHHHHHHHHHHHH
Confidence 97 8888887664 1112333 4455566666666665542 2466778888899999999
Q ss_pred HHHhcCCccccCCCCcccccccccCCCCCceEEeecCc--cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC--Chh
Q 012785 367 AVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ--EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD--RDE 442 (456)
Q Consensus 367 ~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~--~~e 442 (456)
.+.+.+...-..-+. ..+.. -+.+++.. -++.+...++++|+...-|. ...+.+|+++.. +.|
T Consensus 282 ~id~s~fy~~~v~~~---------~RS~m-nV~f~~~~~~ld~~fv~eae~~gl~~lkGh---r~vgGmRasiynA~~~e 348 (365)
T COG1932 282 WIDKSDFYRNLVAKA---------NRSRM-NVTFTLVDAELDKGFVAEAEAAGLIYLKGH---RSVGGLRASIYNAVPLE 348 (365)
T ss_pred HHHhCCccccccchh---------hccce-eEEEEcCcHHHHHHHHHHHHHcCCceeccc---cCCCceeeeeecCCCHH
Confidence 999875332211111 11222 25555543 24556677778888887773 224449999764 888
Q ss_pred HHHHHHHHHHhhh
Q 012785 443 NYNLFVQRLSKIL 455 (456)
Q Consensus 443 ~i~~~l~~L~~~l 455 (456)
+++.+++-|+.+.
T Consensus 349 ~veaL~~fm~~f~ 361 (365)
T COG1932 349 DVEALTDFMDWFE 361 (365)
T ss_pred HHHHHHHHHHHHH
Confidence 9988888887653
No 380
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=97.32 E-value=0.0024 Score=61.61 Aligned_cols=136 Identities=15% Similarity=0.175 Sum_probs=79.8
Q ss_pred cCHHHHHHHHHHHhcCCCCCCCcEEEE-eCCCCCChhhhh----------hhcCCeEeeecc------Ccccccc---CC
Q 012785 170 TGSTQLFQAALYALSSQDASEPISVVS-AAPYYSSYPSIT----------DCVKSRLYKWAG------DAKRFNK---DG 229 (456)
Q Consensus 170 ~G~~~al~~~~~~l~~~gd~~~~~Vlv-~~P~y~~~~~~~----------~~~g~~~~~~~~------d~~~l~~---~~ 229 (456)
.++|+||.+++..++.||| +++. .-.=|.-...+. +..|++...+++ |.+.++. .+
T Consensus 79 vSGTHAi~~~Lfg~LrpGD----~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~~ 154 (403)
T PF06838_consen 79 VSGTHAIALALFGVLRPGD----ELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALKPN 154 (403)
T ss_dssp -SHHHHHHHHHHHH--TT-----EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHHTT
T ss_pred cchHHHHHHHHHhcCCCCC----eEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhccC
Confidence 4567999999999999999 7774 334444444443 333555555544 3333432 36
Q ss_pred CeEEEEcCCCCCCcccch---------HH---hh--hcCcEEEeeecCCCCCCCCCCCCCCCcEEEecCccccCCCCc--
Q 012785 230 PYIELVTSPNNPDGSVRQ---------SV---VN--RSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKSTGHAGT-- 293 (456)
Q Consensus 230 ~~~i~v~~P~NPtG~~~~---------~l---~~--~~~~~iI~De~y~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~-- 293 (456)
+|++++-- -.|..+. ++ ++ +.++++++|..|.++.-..-|..-+-+++.+|+=|..| .|+
T Consensus 155 tk~v~IQR---SrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~~vGADl~aGSLIKNpG-GgiAp 230 (403)
T PF06838_consen 155 TKMVLIQR---SRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEPTEVGADLMAGSLIKNPG-GGIAP 230 (403)
T ss_dssp EEEEEEE----S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GGGGT-SEEEEETTSGGG-TTT-S
T ss_pred ceEEEEec---CCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCccccchhheeccceeCCC-CCccC
Confidence 78888842 2344432 12 23 38999999999997433222233456899999999987 665
Q ss_pred eEEEEEEeCHHHHHHHHHHHh
Q 012785 294 RIGWALVKDMEVAKKMTKYIE 314 (456)
Q Consensus 294 RiG~l~~~~~~~~~~l~~~~~ 314 (456)
--||++++ ++++++......
T Consensus 231 tGGYIaGr-~~lVe~~a~RLT 250 (403)
T PF06838_consen 231 TGGYIAGR-KDLVERAAYRLT 250 (403)
T ss_dssp S-EEEEES-HHHHHHHHHHHS
T ss_pred cCCEEech-HHHHHHHHhhhc
Confidence 35899997 999998876543
No 381
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.26 E-value=0.085 Score=50.95 Aligned_cols=271 Identities=15% Similarity=0.121 Sum_probs=151.3
Q ss_pred HHhcCccCCC-ceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeC-CCCCChhhhhhhcCCeE----e-----eeccC-
Q 012785 154 KVVGNAITEN-HHIVVGTGSTQLFQAALYALSSQDASEPISVVSAA-PYYSSYPSITDCVKSRL----Y-----KWAGD- 221 (456)
Q Consensus 154 ~~~g~~~~~~-~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~-P~y~~~~~~~~~~g~~~----~-----~~~~d- 221 (456)
..++.....- =+|-.-+|+ -|...+-.++++|++ +|.-.+ |.=.-..+....-+-++ + ++.+|
T Consensus 97 eaF~ldp~kWGVNVQp~SGS-PANfavYtall~Ph~----RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~ 171 (477)
T KOG2467|consen 97 EAFGLDPEKWGVNVQPYSGS-PANFAVYTALLKPHE----RIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDP 171 (477)
T ss_pred HHhCCCHHHCceeeccCCCC-chhhHHHhhhcCCCC----eeeeccCCCCCccccccccCCceeeeeeeecccCceeeCC
Confidence 4455543321 244445555 677788889999998 766433 42211111222112111 1 23333
Q ss_pred ------ccccccC----CCeEEEEcCCCCCCcccch---HHhhhcCcEEEeeecCCC-CCCC-CCCCCCCC-cEEEecCc
Q 012785 222 ------AKRFNKD----GPYIELVTSPNNPDGSVRQ---SVVNRSGGILVHDLAYYW-PQYT-SITYPADH-DLMLFTVS 285 (456)
Q Consensus 222 ------~~~l~~~----~~~~i~v~~P~NPtG~~~~---~l~~~~~~~iI~De~y~~-~~~~-~~~~~~~~-~i~i~S~S 285 (456)
-|.|+.. ++++|+-..-..|--..+. ++|.+-|.+++.|.++.- .-.. -+++..+. +|+..|-.
T Consensus 172 ~TG~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTH 251 (477)
T KOG2467|consen 172 STGYIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTH 251 (477)
T ss_pred CCCceehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeecccc
Confidence 3444432 6788765322222222222 389999999999998862 1111 13344443 78888999
Q ss_pred cccCCCCceEEEEEEeCH---------------HHHHHHHHHHhh-ccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhH
Q 012785 286 KSTGHAGTRIGWALVKDM---------------EVAKKMTKYIEL-NTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECF 349 (456)
Q Consensus 286 K~~g~~G~RiG~l~~~~~---------------~~~~~l~~~~~~-~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~ 349 (456)
|++ -|=|-|.+... + ++-+++...... .-.|+..-...+.+.+|+... ...
T Consensus 252 KsL--RGPRg~mIFyR-kGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~----------tpe 318 (477)
T KOG2467|consen 252 KSL--RGPRGAMIFYR-KGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAM----------TPE 318 (477)
T ss_pred ccc--cCCcceeEEEe-ccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhC----------CHH
Confidence 975 67777877664 2 122233222111 122333334444455555321 234
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc---cHHHHHHHHHhCCEEeecCCCC
Q 012785 350 FEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ---EIEDCESFLKGNKILTRSGKHF 426 (456)
Q Consensus 350 l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~~l~~~gI~v~pg~~f 426 (456)
++...+++.++.+.+.+.|.+.+. .+.. ||- +...+.+++.. +...++..|+.-+|...--..+
T Consensus 319 fk~Yq~qV~~Nakala~~l~~~Gy-~lvt--gGT----------DnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvp 385 (477)
T KOG2467|consen 319 FKEYQKQVLKNAKALASALISRGY-KLVT--GGT----------DNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVP 385 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCc-eEec--CCc----------cceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCC
Confidence 555667778888899999988763 2221 221 11146667753 6677888888888887665556
Q ss_pred CC----CCCeEEEEec----C--ChhHHHHHHHHHHhhh
Q 012785 427 GF----SPKYVRISML----D--RDENYNLFVQRLSKIL 455 (456)
Q Consensus 427 g~----~~~~iRis~~----~--~~e~i~~~l~~L~~~l 455 (456)
|. .++.|||... + .++++++..+-|.+.+
T Consensus 386 GD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av 424 (477)
T KOG2467|consen 386 GDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAV 424 (477)
T ss_pred CCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHH
Confidence 53 5789999842 1 5788888877776653
No 382
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.25 E-value=0.0076 Score=57.63 Aligned_cols=189 Identities=17% Similarity=0.125 Sum_probs=108.3
Q ss_pred eEEEEcCCCCCCcccch---------HHhhhcCcEEEeeecCCCCCCCCCCCCC-----CCcEEEecCccccCCCCceEE
Q 012785 231 YIELVTSPNNPDGSVRQ---------SVVNRSGGILVHDLAYYWPQYTSITYPA-----DHDLMLFTVSKSTGHAGTRIG 296 (456)
Q Consensus 231 ~~i~v~~P~NPtG~~~~---------~l~~~~~~~iI~De~y~~~~~~~~~~~~-----~~~i~i~S~SK~~g~~G~RiG 296 (456)
.++++..-|..-|--.. +++++|++.+|+||++.+.+-++-.-.. +.-.=+.||||-|- .| |
T Consensus 273 aaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q-~g---G 348 (484)
T KOG1405|consen 273 AAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQ-TG---G 348 (484)
T ss_pred EEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehhhhhh-cC---c
Confidence 44555433655554322 3899999999999999865444321000 11122457999986 54 5
Q ss_pred EEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhc----C
Q 012785 297 WALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKS----G 372 (456)
Q Consensus 297 ~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~----~ 372 (456)
|.. +++++- =+.++.++++...+.-...+.++++.+.+ ++. .+..+...+.|...|.++ +
T Consensus 349 ffh--~~~frp-n~pYrifNTWmGdP~k~lll~~vv~~I~~---------~~L----l~n~~~vG~~l~~gL~~Lq~~~p 412 (484)
T KOG1405|consen 349 FFH--DEEFRP-NEPYRIFNTWMGDPSKNLLLEEVVQEIKR---------EDL----LNNVAHVGKALLKGLLELQAKYP 412 (484)
T ss_pred ccc--CcccCC-CchHHHhhhhcCChHHHHHHHHHHHHHhH---------HHH----HHHHHHHHHHHHHHHHHHHHhCc
Confidence 544 344432 12345556777777666666777775544 233 334444445555555443 3
Q ss_pred C-ccccCCCCcccccccccCCCCCceEEeecCcc--HHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHH
Q 012785 373 L-FSVPELPSQFCTFLGRAFEPQPAFAWLKCEQE--IEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQ 449 (456)
Q Consensus 373 ~-~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~ 449 (456)
. +.-.+.. |.|+-++++.. .+.+...++-+||.+-- +|...=.+|-++.-.+...+.+++
T Consensus 413 ~~~~~~RGr--------------GTF~a~d~ps~~~Rdk~i~~~~~nGv~~GG---Cg~~siRfRPsLvf~~~Ha~i~l~ 475 (484)
T KOG1405|consen 413 GKINNLRGR--------------GTFIAWDCPSGSIRDKLILIARLNGVNLGG---CGDKSIRFRPSLVFRKHHADIFLD 475 (484)
T ss_pred hhhhccccc--------------ceEEEEeCCChHHHHHHHHHHHHcCceecc---cccceeeeccceeehhhhHHHHHH
Confidence 2 2222333 34677788753 45677788888887643 332223345555447778888899
Q ss_pred HHHhhhC
Q 012785 450 RLSKILS 456 (456)
Q Consensus 450 ~L~~~l~ 456 (456)
++.+++.
T Consensus 476 ~~~k~l~ 482 (484)
T KOG1405|consen 476 IFDKILA 482 (484)
T ss_pred HHHHHhc
Confidence 9988763
No 383
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=97.23 E-value=0.0014 Score=63.68 Aligned_cols=201 Identities=17% Similarity=0.152 Sum_probs=55.2
Q ss_pred CceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCC---CC---CChhhhhhhcCCeEeeecc-------CccccccCC
Q 012785 163 NHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAP---YY---SSYPSITDCVKSRLYKWAG-------DAKRFNKDG 229 (456)
Q Consensus 163 ~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P---~y---~~~~~~~~~~g~~~~~~~~-------d~~~l~~~~ 229 (456)
.+..+++|+...|+.+++.++... . +|++..- .+ +...++.+..|++++.+.. |.+.-..++
T Consensus 62 AeaA~VvNnnaAAv~L~l~~la~~-~----EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN~t~~~Dye~AI~e~ 136 (367)
T PF03841_consen 62 AEAALVVNNNAAAVLLALNTLAKG-K----EVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTNRTHLSDYEKAITEN 136 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccc-c----cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 356778888889999999888654 3 6776542 12 2255677778888886543 222212246
Q ss_pred CeEEEEcCCCCCC--c---cc----chHHhhhcCcEEEeeecCC--------C-CCCCCCC--CCCCCcEEEecCccccC
Q 012785 230 PYIELVTSPNNPD--G---SV----RQSVVNRSGGILVHDLAYY--------W-PQYTSIT--YPADHDLMLFTVSKSTG 289 (456)
Q Consensus 230 ~~~i~v~~P~NPt--G---~~----~~~l~~~~~~~iI~De~y~--------~-~~~~~~~--~~~~~~i~i~S~SK~~g 289 (456)
+.+++-..++|-. | .+ +.++++++++++|+|-.=. + +.-..+. -..+-+++++|=-|.+|
T Consensus 137 Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLG 216 (367)
T PF03841_consen 137 TAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLG 216 (367)
T ss_dssp ------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSS
T ss_pred ccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCC
Confidence 6777766777752 2 22 1148899999999997541 1 1111121 23456899999999987
Q ss_pred CCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCC-CCCcchhHHHHHHHHHHHHHHHHHHHH
Q 012785 290 HAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKP-SGSEDECFFEFTNHQMSTRWKQLRMAV 368 (456)
Q Consensus 290 ~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~l~~~L 368 (456)
-|- .|.++++ +++++++++-.-.-.+-+..+...+..+.|+...+.... +.--.-+.+....+.+++|.+.+.+.|
T Consensus 217 GPQ--aGiI~Gk-k~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l 293 (367)
T PF03841_consen 217 GPQ--AGIIVGK-KELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQL 293 (367)
T ss_dssp S-S---EEEEEE-HHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH-----------------------------------
T ss_pred CCC--eEEEEeC-HHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccc
Confidence 565 7999998 999999988765567888999999988888865432100 000012335556677777777777777
Q ss_pred Hhc
Q 012785 369 QKS 371 (456)
Q Consensus 369 ~~~ 371 (456)
+..
T Consensus 294 ~~~ 296 (367)
T PF03841_consen 294 KAA 296 (367)
T ss_dssp ---
T ss_pred ccc
Confidence 654
No 384
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.11 E-value=0.21 Score=54.97 Aligned_cols=225 Identities=9% Similarity=0.044 Sum_probs=129.8
Q ss_pred EEEEeCCCCCChhhhhhh----cCCeEeeeccCccccccCCCeEEEEcCCCCCCcccch-----HHhhhcCcEEEeeecC
Q 012785 193 SVVSAAPYYSSYPSITDC----VKSRLYKWAGDAKRFNKDGPYIELVTSPNNPDGSVRQ-----SVVNRSGGILVHDLAY 263 (456)
Q Consensus 193 ~Vlv~~P~y~~~~~~~~~----~g~~~~~~~~d~~~l~~~~~~~i~v~~P~NPtG~~~~-----~l~~~~~~~iI~De~y 263 (456)
+|+|++-.+|.+..+.+. .|++++. .|.+.....++..+++.+||. .|.+.+ +++++.|.++|. -
T Consensus 170 ~~~v~~~~hP~~~~v~~t~~~~~g~~i~~--~~~~~~~~~~~~~v~vq~P~~-~G~i~d~~~i~~~~h~~gal~~~-~-- 243 (954)
T PRK12566 170 RFFVDEHCHPQTLSVLRTRAEGFGFELVV--DAVDNLAAHAVFGALLQYPDT-HGEIRDLRPLIDQLHGQQALACV-A-- 243 (954)
T ss_pred EEEECCCCCHHHHHHHHHhhhcCCcEEEE--cchhhcCCCCEEEEEEECCCC-ceEEccHHHHHHHHHHcCCEEEE-E--
Confidence 899999999888876554 4666654 233333333567888888863 577744 367778887663 2
Q ss_pred CCC-CCCCC--CCCCCCcEEEec---CccccCCCCceEEEEEEeCHHHHHHH----------------------------
Q 012785 264 YWP-QYTSI--TYPADHDLMLFT---VSKSTGHAGTRIGWALVKDMEVAKKM---------------------------- 309 (456)
Q Consensus 264 ~~~-~~~~~--~~~~~~~i~i~S---~SK~~g~~G~RiG~l~~~~~~~~~~l---------------------------- 309 (456)
.++ ...-+ +...+-+|++++ |.=-+|..|=-.||+.+. +++..+|
T Consensus 244 ~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~-~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHI 322 (954)
T PRK12566 244 ADLLSLLVLTPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACR-DDYKRAMPGRIIGVSRDARGNTALRMALQTREQHI 322 (954)
T ss_pred eCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCCCCCCeeeeeeh-HHHHhhCCCCccceeecCCCCeeeehhhhHHHHHh
Confidence 221 11111 233445677662 222223233346787776 5444432
Q ss_pred HHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccc
Q 012785 310 TKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGR 389 (456)
Q Consensus 310 ~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~ 389 (456)
++-+..+..+.+.-..+.++.+.-.. .| .+-++++.++...+..++.+.|.+.+ +++... .||+
T Consensus 323 RReKAtSNICT~qaL~A~~a~~Y~~~-~G--------p~Gl~~ia~~~~~~a~~l~~~l~~~g-~~~~~~-----~fF~- 386 (954)
T PRK12566 323 RREKANSNICTAQVLLANIAGFYAVY-HG--------PEGLKRIAQRVHRLTAILAAGLEAKG-IKRLNR-----HFFD- 386 (954)
T ss_pred hhccccchhhHHHHHHHHHHHHHHHH-hC--------hHHHHHHHHHHHHHHHHHHHHHHhcC-CccccC-----Cccc-
Confidence 22222233444333333333333221 22 55677777888888889999998844 444321 2232
Q ss_pred cCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC--ChhHHHHHHHHHH
Q 012785 390 AFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD--RDENYNLFVQRLS 452 (456)
Q Consensus 390 ~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~--~~e~i~~~l~~L~ 452 (456)
=+.+++....+.+.+...++||-++-- +++.+.||+.- +.++++.++..+.
T Consensus 387 -------~~~v~~~~~~~~~~~~a~~~~~n~r~~-----~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 387 -------TLTLEVGGAQAAIIESAEAARINLRIL-----GRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred -------eEEEEccCCHHHHHHHHHHCCCeeEEe-----CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 144455324667778888899988862 35678888863 7788888888773
No 385
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=96.84 E-value=0.11 Score=51.35 Aligned_cols=272 Identities=12% Similarity=0.017 Sum_probs=133.8
Q ss_pred HHHHhcCccCCCceEEEccCHHH-HHHHHHHHhc--CCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeecc--------
Q 012785 152 LHKVVGNAITENHHIVVGTGSTQ-LFQAALYALS--SQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAG-------- 220 (456)
Q Consensus 152 ~~~~~g~~~~~~~~I~~t~G~~~-al~~~~~~l~--~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-------- 220 (456)
+++..|.... ...++.+.+|. .+.+.+.++. +.++ .|+.+.-..-.-...+..+|++++-++.
T Consensus 65 ~~~~~G~~~~--~~~~~vP~atgm~l~l~l~~l~~r~~a~----~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~ 138 (389)
T PF05889_consen 65 ALRLAGLRSV--KSCFVVPMATGMSLTLCLLALRMRPKAK----YVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELI 138 (389)
T ss_dssp HHHHTTHTTH--CEEEEESS-HHHHHHHHHHHHHHHCT------EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEE
T ss_pred HHHHcCCccc--cceEEEecccccHHHHHHHHHhcccCCc----eEEEeeccccchHHHHHhcCCeEEEeeccCCCCeee
Confidence 3455565533 34555555443 3455555554 3455 6776665444445566777998775542
Q ss_pred -Ccccccc------CCCeEEEEcCC-----CCCCcc-cchHHhhhcCcEEEeeecCCCCCCCC---C--CCCCCC-cEEE
Q 012785 221 -DAKRFNK------DGPYIELVTSP-----NNPDGS-VRQSVVNRSGGILVHDLAYYWPQYTS---I--TYPADH-DLML 281 (456)
Q Consensus 221 -d~~~l~~------~~~~~i~v~~P-----~NPtG~-~~~~l~~~~~~~iI~De~y~~~~~~~---~--~~~~~~-~i~i 281 (456)
|.+.++. ....+.+++.+ ++|.-. -+.++|+++|++.|+-.||.=....- + ....++ ++++
T Consensus 139 td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~v 218 (389)
T PF05889_consen 139 TDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAFV 218 (389)
T ss_dssp EHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEE
T ss_pred ccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcceee
Confidence 1222221 13344455433 444411 23359999999999999998321100 0 011122 5889
Q ss_pred ecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHH
Q 012785 282 FTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRW 361 (456)
Q Consensus 282 ~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 361 (456)
-|.-|.|- -+.--+-+..+++..+..+.+....-.+..+.+.-......|. ..-........++..
T Consensus 219 qS~dkNF~-VPvGgai~As~~~~~i~~vs~~YpGRas~sp~ld~~itLl~LG-------------~~g~~~ll~~r~~~f 284 (389)
T PF05889_consen 219 QSTDKNFM-VPVGGAIMASFDPSGILAVSKEYPGRASASPSLDLFITLLSLG-------------CTGYGALLKERKASF 284 (389)
T ss_dssp EEHHHHHC-EESSHEEEEESSHHHHHHHHHTSHSHBTSHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHH
T ss_pred eecCCCEE-ecCCCcEEEecCHHHHHHHHHHhhhhhhcccchHHHHHHHHHh-------------hhHHHHHHHHHHHHH
Confidence 99999994 3333355666678888887765432233333333222222222 222333333334444
Q ss_pred HHHHHHHH----hcCCccccCCCCcccccccccCCCCCceEEeecC-------ccHHHHHHHHHhCCEE----eecCCCC
Q 012785 362 KQLRMAVQ----KSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCE-------QEIEDCESFLKGNKIL----TRSGKHF 426 (456)
Q Consensus 362 ~~l~~~L~----~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~-------~~~~~~~~~l~~~gI~----v~pg~~f 426 (456)
..+.+.|+ +.+..-...|.- .--+-+.++ .+..++...|..+||. |.|+..+
T Consensus 285 ~~l~erl~~~aee~~e~ll~~p~N-------------~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~ 351 (389)
T PF05889_consen 285 PYLKERLKKWAEEVGERLLETPRN-------------HISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKK 351 (389)
T ss_dssp HHHHHHHHHHHHHTTEEBSSSTT--------------SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCE
T ss_pred HHHHHHHHHHHHHhhhhhcCCCCC-------------CeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCc
Confidence 44444444 333111111111 011233333 1346788888888885 3333333
Q ss_pred CC------CCCeEEEEec--CChhHHHHHHHHHHhhhC
Q 012785 427 GF------SPKYVRISML--DRDENYNLFVQRLSKILS 456 (456)
Q Consensus 427 g~------~~~~iRis~~--~~~e~i~~~l~~L~~~l~ 456 (456)
.. ...|+-++-+ .++||++.++++|+++++
T Consensus 352 ~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 352 QTSHSSNYPCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp EETTSS--SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred ccccCCCCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 11 2468888432 399999999999999874
No 386
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=96.38 E-value=0.13 Score=51.28 Aligned_cols=283 Identities=14% Similarity=0.143 Sum_probs=151.3
Q ss_pred HHHHHHHHHHHHH-hcCccCCCceEEEccCHHHHHHHHHHHhc---C--CCCCCCcEEEEeCCCCCChhhhhhhcCCeEe
Q 012785 143 PEFAKEVVRLHKV-VGNAITENHHIVVGTGSTQLFQAALYALS---S--QDASEPISVVSAAPYYSSYPSITDCVKSRLY 216 (456)
Q Consensus 143 ~~lr~aia~~~~~-~g~~~~~~~~I~~t~G~~~al~~~~~~l~---~--~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~ 216 (456)
.++..+..+++.. ++.+ . ..-=..|.|+++++.++...-. . .|-..| .++++.-....+...++.+++++.
T Consensus 119 ~~~e~~~Vnm~~~L~~~~-~-~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p-~iv~~~~v~~a~eK~a~yf~v~l~ 195 (491)
T KOG1383|consen 119 RKLEAECVNMIANLFNAP-S-DSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKP-NIVTPQNVHAAFEKAARYFEVELR 195 (491)
T ss_pred HHHHHHHHHHHHHHhcCC-c-cccCccccccchHHHHHHHHHHHHHHhccCCCCc-cccchHHHHHHHHHHHhhEEEEEE
Confidence 5566666555532 3222 1 1222478899999655554431 1 122233 778877777788888888899988
Q ss_pred eeccCccccc----------cCCCeEEEEcCCCCCCcccch-----HHhhh-cCcEEEeeecCCCCCC----CCCCCCCC
Q 012785 217 KWAGDAKRFN----------KDGPYIELVTSPNNPDGSVRQ-----SVVNR-SGGILVHDLAYYWPQY----TSITYPAD 276 (456)
Q Consensus 217 ~~~~d~~~l~----------~~~~~~i~v~~P~NPtG~~~~-----~l~~~-~~~~iI~De~y~~~~~----~~~~~~~~ 276 (456)
.+++|+...+ .+++.+++..-|+-|+|..=+ +++.+ +++.+-.|.+-.++-. .......-
T Consensus 196 ~V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdF 275 (491)
T KOG1383|consen 196 EVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDF 275 (491)
T ss_pred eeeccccceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCcccccc
Confidence 8887754432 136788888899999999855 24444 9999999987765311 11101111
Q ss_pred CcEEEecCc----cccCCCCceEEEEEEeCHHHHH-HHH---H----HHhhccCcCChHHHHHHHHHHHhhhCCCCCCCC
Q 012785 277 HDLMLFTVS----KSTGHAGTRIGWALVKDMEVAK-KMT---K----YIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGS 344 (456)
Q Consensus 277 ~~i~i~S~S----K~~g~~G~RiG~l~~~~~~~~~-~l~---~----~~~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~ 344 (456)
++-.+-|.| | +|+.---+||++-.++++.. ++. + .....+.+.|..+...+++...-+.-|+
T Consensus 276 r~p~V~Sisa~~HK-YGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~----- 349 (491)
T KOG1383|consen 276 RVPGVTSISADGHK-YGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGE----- 349 (491)
T ss_pred CCCCceeEeeccce-eeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhH-----
Confidence 222222222 3 34332337888876554322 110 0 0111233444444333333333222331
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCc-cHHHHHHHHHhCCEEeecC
Q 012785 345 EDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQ-EIEDCESFLKGNKILTRSG 423 (456)
Q Consensus 345 ~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~l~~~gI~v~pg 423 (456)
+.+. +..+.+.+....+++.+++.+.+.+... |.-.|+..+-.. +.-.+.+.|++.|-.+..
T Consensus 350 --eGY~-~~~~~ive~~~~l~egie~i~~i~i~gk-------------p~vs~~~~~s~~~~i~elsd~l~~~GW~lna- 412 (491)
T KOG1383|consen 350 --EGYR-ENTQNIVETARKLREGIENIKGIKIVGK-------------PLVSFILFGSNDVNIFELSDLLRKKGWILNA- 412 (491)
T ss_pred --HHHH-HHHHHHHHHHHHHHHhhhccccceecCC-------------CcEEEEEccCCccchhhhhHHHHhcCcCccc-
Confidence 3344 4455566777788899988765554432 111133333222 455677889999887754
Q ss_pred CCCCCCCCeEEEEecC---ChhHHHHHHHHHHhh
Q 012785 424 KHFGFSPKYVRISMLD---RDENYNLFVQRLSKI 454 (456)
Q Consensus 424 ~~fg~~~~~iRis~~~---~~e~i~~~l~~L~~~ 454 (456)
-.|.. .+-+++.. .++--++++..|+++
T Consensus 413 lq~P~---a~Hi~vt~~~~~~~~A~~~v~Di~~~ 443 (491)
T KOG1383|consen 413 LQFPA---AIHICVTRVHAREDVADRFVADIRKV 443 (491)
T ss_pred cCCCC---ceEEEEEeeeccHHHHHHHHHHHHHH
Confidence 22322 33444332 333234455555544
No 387
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=95.26 E-value=0.3 Score=48.46 Aligned_cols=323 Identities=14% Similarity=0.127 Sum_probs=167.0
Q ss_pred CCCCeEEecCCCCCCCchhHhhhcccccccccCccccccccC---CCCcccCCCHHHHHHHHHHHHH-hcCccCCCceEE
Q 012785 92 GGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSD---VRNLCWFLEPEFAKEVVRLHKV-VGNAITENHHIV 167 (456)
Q Consensus 92 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~---~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~I~ 167 (456)
-+..+|.||++...+.+. ..+... -.++.....-|.| .+| +.++...+.+|+.. .|.+.. .+-
T Consensus 64 vd~~m~PLGSCTMK~Np~--~e~~~~---~~p~f~~iHP~~pe~~vqG-----~l~li~~Lq~~L~~ITG~Dav---sLQ 130 (496)
T COG1003 64 VDRGMIPLGSCTMKLNPK--AEMKPA---TWPEFANIHPFQPEEQVQG-----YLELIYELQEWLKEITGMDAV---SLQ 130 (496)
T ss_pred cccCccCCcccccccCch--hhcccc---cccchhhcCCCCChHHHHH-----HHHHHHHHHHHHHHhcCCcee---ecc
Confidence 456789999998766543 111111 1111111112322 245 47777778888843 343221 122
Q ss_pred EccCHHHHHH--HHHHHh-cCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc------cccc---CCCeEEEE
Q 012785 168 VGTGSTQLFQ--AALYAL-SSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK------RFNK---DGPYIELV 235 (456)
Q Consensus 168 ~t~G~~~al~--~~~~~l-~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~------~l~~---~~~~~i~v 235 (456)
.-+|++.=+. ++++.. -..|+..+..+++++-.+.-....+.+.|.+++.++.|.+ .|+. +++.++++
T Consensus 131 P~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~G~VDlddLk~k~~~~~AalMi 210 (496)
T COG1003 131 PNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDENGNVDLDDLRAKAEDNLAALMI 210 (496)
T ss_pred CCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCCCCCccHHHHHHHhccceeEEEe
Confidence 3455543222 222222 3345444448999999998888899999999998886544 3433 36789999
Q ss_pred cCCCCCCcccch---H---HhhhcCcEEEeeecCCCCCCCCCC--CCCCCcEEEecCccccCCC----CceEEEEEEeCH
Q 012785 236 TSPNNPDGSVRQ---S---VVNRSGGILVHDLAYYWPQYTSIT--YPADHDLMLFTVSKSTGHA----GTRIGWALVKDM 303 (456)
Q Consensus 236 ~~P~NPtG~~~~---~---l~~~~~~~iI~De~y~~~~~~~~~--~~~~~~i~i~S~SK~~g~~----G~RiG~l~~~~~ 303 (456)
+|||- .|..=. + +..++|..+-.|-+-.. ...++. ..-+-+|+=.-+.|+|+.| |=-.|=+.++ .
T Consensus 211 TnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlN-A~vG~~rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk-~ 287 (496)
T COG1003 211 TNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLN-AIVGLARPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVK-A 287 (496)
T ss_pred ccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchh-hhhccccccccccceEEeecccccccCCCCCCCCCCceehH-h
Confidence 99862 344322 2 55679999988876542 111221 2223345545577777543 2224555444 4
Q ss_pred HHHHHHHH---------HH-----------hhccCcCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHH
Q 012785 304 EVAKKMTK---------YI-----------ELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQ 363 (456)
Q Consensus 304 ~~~~~l~~---------~~-----------~~~~~~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 363 (456)
+++.-+-. +. ....+|.-.+.-. +-..+.. -| .+-+++.-+.---+.++
T Consensus 288 ~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~-a~~YI~~--mG--------~~GL~~ase~AvLNANY 356 (496)
T COG1003 288 HLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPI-AWAYIRM--MG--------ADGLKQASEVAVLNANY 356 (496)
T ss_pred hccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHH-HHHHHHH--Hh--------HHHHHHHHHHHHHhHHH
Confidence 43332211 00 0011222222222 2222221 12 34455555555556677
Q ss_pred HHHHHHhcCCccccCCCCcccccccccCCCCCce-EEeecC-------ccHHHHHHHHHhCCEEeecCCCCCC-CCCeEE
Q 012785 364 LRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAF-AWLKCE-------QEIEDCESFLKGNKILTRSGKHFGF-SPKYVR 434 (456)
Q Consensus 364 l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f-~~~~~~-------~~~~~~~~~l~~~gI~v~pg~~fg~-~~~~iR 434 (456)
+...|+.. +.+.-..-..|. + ..+... -...++.+.|.++|+.- |--.|.. -.+.+=
T Consensus 357 ia~rL~~~--y~~~y~~~~~~~-----------HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHa-PT~~FPliV~~tLM 422 (496)
T COG1003 357 IARRLKGY--YPVPYTGENRVA-----------HECILDARPLKKETGVRALDVAKRLLDYGFHA-PTMYFPLIVAGTLM 422 (496)
T ss_pred HHHHhhhc--CccccCCCCcce-----------eEEEeechHhHhhcCCcHHHHHHHHHhcCCCC-CcccCcccccccee
Confidence 78888753 222111100111 2 223332 15788999999999874 3333431 234444
Q ss_pred EEec--CChhHHHHHHHHHHhhh
Q 012785 435 ISML--DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 435 is~~--~~~e~i~~~l~~L~~~l 455 (456)
|=-+ -++++++.++++|.++.
T Consensus 423 IEPTEsEsk~eLDrf~dami~I~ 445 (496)
T COG1003 423 IEPTESESKEELDRFIDAMIAIR 445 (496)
T ss_pred ecCCCCCCHHHHHHHHHHHHHHH
Confidence 4332 26789999999988763
No 388
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=94.36 E-value=1.5 Score=46.51 Aligned_cols=217 Identities=11% Similarity=0.036 Sum_probs=124.9
Q ss_pred HHHHHHHHHHH-HHhcCccCCCceEEEccCHHHHHHHHHHHhcCCC----------------------------------
Q 012785 143 PEFAKEVVRLH-KVVGNAITENHHIVVGTGSTQLFQAALYALSSQD---------------------------------- 187 (456)
Q Consensus 143 ~~lr~aia~~~-~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~g---------------------------------- 187 (456)
..+++.+.+|+ +..|.+. ..-+ +|+|+|++...++.+.....
T Consensus 122 t~lE~~vi~~la~l~G~~~--~~G~-~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~ 198 (608)
T TIGR03811 122 SQMEEEVGKEFATLMGYKN--GWGH-IVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLL 198 (608)
T ss_pred HHHHHHHHHHHHHHhCCCC--CCeE-EeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccc
Confidence 78888888888 4566653 2334 78899998876665543210
Q ss_pred -------------------C-CCCcEEEEeCCCCCChhhhhhhcCC---eEeeeccC------cccccc-------C--C
Q 012785 188 -------------------A-SEPISVVSAAPYYSSYPSITDCVKS---RLYKWAGD------AKRFNK-------D--G 229 (456)
Q Consensus 188 -------------------d-~~~~~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~d------~~~l~~-------~--~ 229 (456)
+ ....+|+++.-.+......+..+|+ .++.++.| .+.|+. . .
T Consensus 199 ~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p 278 (608)
T TIGR03811 199 ESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTP 278 (608)
T ss_pred cccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCC
Confidence 0 0011577777778889999999998 36666654 333432 1 1
Q ss_pred CeEEEEcCCCCCCcccch-----HHh---hhcCc--EEEeeecCCCCC---CCC-----CC-------------------
Q 012785 230 PYIELVTSPNNPDGSVRQ-----SVV---NRSGG--ILVHDLAYYWPQ---YTS-----IT------------------- 272 (456)
Q Consensus 230 ~~~i~v~~P~NPtG~~~~-----~l~---~~~~~--~iI~De~y~~~~---~~~-----~~------------------- 272 (456)
+-+|+-+-..=.+|.+=+ ++| +++|+ ++-+|-+|.+.. +.+ ++
T Consensus 279 ~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~ 358 (608)
T TIGR03811 279 ILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKE 358 (608)
T ss_pred eEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccc
Confidence 234555556667888744 356 56887 699999999621 110 00
Q ss_pred -----------CCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhh--------------ccCcCChHHHHH
Q 012785 273 -----------YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIEL--------------NTIGVSKDSQLR 327 (456)
Q Consensus 273 -----------~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~--------------~~~~~s~~~q~~ 327 (456)
....-+=+...+.|.+. .-...|.++++|+++.+.+...... .+...+.+...+
T Consensus 359 ~l~~~~~~~l~gle~ADSItvDpHK~g~-~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~A 437 (608)
T TIGR03811 359 YISREVYNAYKAISEAESVTIDPHKMGY-IPYSAGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILEGSKAGATA 437 (608)
T ss_pred cccHhHHHHHhcCcCceEEEeCcccccc-cCCCeEEEEEeCHHHHHHHhcCcchhccccccCcccccccceecCCccHHH
Confidence 01112334567889765 5578999999988765544321110 011233333222
Q ss_pred HH--HHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Q 012785 328 AA--KVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKS 371 (456)
Q Consensus 328 a~--~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~ 371 (456)
+. ..++.+--+ .+-+.++.++.-+..+.+.+.|...
T Consensus 438 lklW~~lr~l~~G--------~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 438 ASVWAAHKVLPLN--------VTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred HHHHHHHHHHhcC--------HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22 222211012 3455667777777778888888774
No 389
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=92.06 E-value=0.57 Score=44.27 Aligned_cols=154 Identities=12% Similarity=0.124 Sum_probs=86.7
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEE-eCCCCCChhhhhhh----------
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVS-AAPYYSSYPSITDC---------- 210 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv-~~P~y~~~~~~~~~---------- 210 (456)
...|.+..|+-++.....+ +.-+-+ +|+||..++..+++||| +.+. .---|.-...+.-.
T Consensus 67 RdtLe~vyA~vf~aE~a~V----Rpq~is-GTHAI~~aLfg~LRpgD----ell~i~G~PYDTLeevIG~rg~~~gSL~d 137 (416)
T COG4100 67 RDTLERVYAQVFGAEAALV----RPQIIS-GTHAIACALFGILRPGD----ELLYITGSPYDTLEEVIGLRGEGQGSLKD 137 (416)
T ss_pred hhHHHHHHHHHhcccccee----eeeeec-chhHHHHHHHhccCCCC----eEEEecCCcchhHHHHhccCCCCcccHHH
Confidence 4556666666664311111 222334 46999999999999999 6553 33333333333322
Q ss_pred cCCeEeeecc------Ccccccc---CCCeEEEEcCCCCCCcccch------H------Hhh--hcCcEEEeeecCCCCC
Q 012785 211 VKSRLYKWAG------DAKRFNK---DGPYIELVTSPNNPDGSVRQ------S------VVN--RSGGILVHDLAYYWPQ 267 (456)
Q Consensus 211 ~g~~~~~~~~------d~~~l~~---~~~~~i~v~~P~NPtG~~~~------~------l~~--~~~~~iI~De~y~~~~ 267 (456)
+|+....+++ |.++++. +++|+|.+.. -+|..+. + +.+ ..++++++|..|.+.-
T Consensus 138 fgi~Y~~v~Lt~~gkiD~~~v~~~i~~~tkli~IQR---S~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFv 214 (416)
T COG4100 138 FGIKYKAVPLTADGKIDIQAVKTAISDRTKLIGIQR---SKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFV 214 (416)
T ss_pred hCcceeecccccCCcccHHHHHHhcCccceEEEEEe---ccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhh
Confidence 2222223333 3333322 3678887632 2333322 2 233 3789999999999632
Q ss_pred CCCCCCCCCCcEEEecCccccCCCCc--eEEEEEEeCHHHHHHH
Q 012785 268 YTSITYPADHDLMLFTVSKSTGHAGT--RIGWALVKDMEVAKKM 309 (456)
Q Consensus 268 ~~~~~~~~~~~i~i~S~SK~~g~~G~--RiG~l~~~~~~~~~~l 309 (456)
-.--+..-+-+++.+|+-|.-| .|+ --||+.++ ++++++.
T Consensus 215 E~~EPt~vGaDliAGSLIKNpG-GgiaktGGYiaGk-~~~ve~~ 256 (416)
T COG4100 215 EEKEPTHVGADLIAGSLIKNPG-GGIAKTGGYIAGK-AELVEAA 256 (416)
T ss_pred hccCccccchhhhccceeeCCC-Cceeeccceeech-HHHHHhh
Confidence 2212223355789999999876 554 24899887 7777754
No 390
>PLN02672 methionine S-methyltransferase
Probab=89.48 E-value=2.8 Score=47.40 Aligned_cols=187 Identities=13% Similarity=0.096 Sum_probs=114.3
Q ss_pred cccCCCCcccCCCHHHHHHHHHHHHHh-cCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCC---Chh
Q 012785 130 YFSDVRNLCWFLEPEFAKEVVRLHKVV-GNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYS---SYP 205 (456)
Q Consensus 130 ~y~~~~G~~~~~~~~lr~aia~~~~~~-g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~---~~~ 205 (456)
-|.++.| +..+|..||.|++.+ +.+.+ +++|++.+.-..|++.+++.+...- .++=+.-+-+ .+.
T Consensus 421 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 489 (1082)
T PLN02672 421 PCEPPAG-----SKRFRNLIAGFMRIYHHIPLT-PDNVVVFPSRAVAIENALRLFSPRL-----AIVDEHLTRWLPKKWL 489 (1082)
T ss_pred CCCCCcc-----chHHHHHHHHHHHHhcCCcCC-ccceEEeccHHHHHHHHHHhhChHH-----HhhhhhhhccCCHHHH
Confidence 4777788 799999999999875 56665 6899999999999999998664321 0110111111 122
Q ss_pred hhhhhcC----------CeEeeec--cC--ccccccCCCeEEEEcCCCC--CCcccchH---HhhhcCcEEEeeecCC-C
Q 012785 206 SITDCVK----------SRLYKWA--GD--AKRFNKDGPYIELVTSPNN--PDGSVRQS---VVNRSGGILVHDLAYY-W 265 (456)
Q Consensus 206 ~~~~~~g----------~~~~~~~--~d--~~~l~~~~~~~i~v~~P~N--PtG~~~~~---l~~~~~~~iI~De~y~-~ 265 (456)
......| ++++.-| .| .+-+++-++++|+..--+. -|-..+.. .+++.|..++.|..-. +
T Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (1082)
T PLN02672 490 TSLAIENATSDSKSDDVITVIEAPRQSDLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISDHLE 569 (1082)
T ss_pred hHhhhhcccccCccCCeEEEEeCCCcchHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhhhee
Confidence 2222222 1122211 12 1222344777777644332 11111112 4677999999997543 2
Q ss_pred ----CCCCCC------CCCCCCcEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHH
Q 012785 266 ----PQYTSI------TYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLR 327 (456)
Q Consensus 266 ----~~~~~~------~~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~ 327 (456)
++..++ ...+.+..++..+-|.--.+.+-+.+++.-++.+.+.+.+........++.++|.-
T Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (1082)
T PLN02672 570 LSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISENEAVLKALSKTGEVLEGRTAIISQFY 641 (1082)
T ss_pred eccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCcHHHHHHHHHHHHhhccchHHHHHHH
Confidence 211111 12356777788888888789999999988777888888888777777777777764
No 391
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=88.09 E-value=24 Score=33.44 Aligned_cols=260 Identities=13% Similarity=0.094 Sum_probs=134.6
Q ss_pred eEE-EccCHHHHHHHHHHHhc--CCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeec---------cCccccccC-CCe
Q 012785 165 HIV-VGTGSTQLFQAALYALS--SQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWA---------GDAKRFNKD-GPY 231 (456)
Q Consensus 165 ~I~-~t~G~~~al~~~~~~l~--~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~---------~d~~~l~~~-~~~ 231 (456)
.|+ +-.|++.-+.++..-|. +.|+. ..-|++-..+--.+.+.-+.-....+-++ .|.+.++.. +.+
T Consensus 72 ~vlf~QGGGt~qFaAv~lNL~glK~g~~-AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~~da~ 150 (370)
T KOG2790|consen 72 KVLFLQGGGTGQFAAVPLNLIGLKHGRC-ADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELNPDAS 150 (370)
T ss_pred eEEEEeCCCcccccccchhhhccccCCc-cceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhcccCCCcc
Confidence 454 44555555555555554 44421 00555554443334433333222233222 244555432 334
Q ss_pred EEEEcCCCCCC--cccchHHh--hhcCcEEEeeecCCCCCCCCCC-CCCCCcEEEecCccccCCCCceEEEEEEeCHHHH
Q 012785 232 IELVTSPNNPD--GSVRQSVV--NRSGGILVHDLAYYWPQYTSIT-YPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVA 306 (456)
Q Consensus 232 ~i~v~~P~NPt--G~~~~~l~--~~~~~~iI~De~y~~~~~~~~~-~~~~~~i~i~S~SK~~g~~G~RiG~l~~~~~~~~ 306 (456)
.+++ +.|.| |+-++.+- .-++..+|.|-.-- +.+-+ +-....+++...-|.+|.+|+-+ +++. ++++
T Consensus 151 yvyy--CaNETVHGVEf~~~P~~~~~~~vlVaDmSSn---flSrpvDvsk~gvi~aGAQKN~G~aG~Tv--vivr-~dll 222 (370)
T KOG2790|consen 151 YVYY--CANETVHGVEFDFIPVNDPKGAVLVADMSSN---FLSRPVDVSKFGVIFAGAQKNVGPAGVTV--VIVR-KDLL 222 (370)
T ss_pred EEEE--ecCceeeceecCCCCCCCCCCceEEEecccc---hhcCCccchhcceEEeccccccCccccEE--EEEe-hhhh
Confidence 4444 45655 66666544 55788888886422 22222 33456788888999999888644 4444 5555
Q ss_pred HHHHHHH-----------hhccC-cCChHHHHHHHHHHHhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 012785 307 KKMTKYI-----------ELNTI-GVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLF 374 (456)
Q Consensus 307 ~~l~~~~-----------~~~~~-~~s~~~q~~a~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~ 374 (456)
......- ..+-+ .++.+..++.--.++++.+. .-++.+.+.-.++.+.+++.+.+..++
T Consensus 223 g~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~---------GGl~a~e~~n~~KskllYd~iD~s~gf 293 (370)
T KOG2790|consen 223 GNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEK---------GGLAAMEKLNQEKSKLLYDAIDNSNGF 293 (370)
T ss_pred cccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhc---------ccHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 4332210 00112 23333444444444444332 235667777788899999999987544
Q ss_pred cccCCCCcccccccccCCCCCceEEeecCc---cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC--ChhHHHHHHH
Q 012785 375 SVPELPSQFCTFLGRAFEPQPAFAWLKCEQ---EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD--RDENYNLFVQ 449 (456)
Q Consensus 375 ~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~--~~e~i~~~l~ 449 (456)
...+.+... .+.- -+-+++.. +.+++.+..+++ ..-.-|. ..-+.+|-|+-. +-++.+++++
T Consensus 294 y~cpVe~~~--------RS~M-NV~Fri~~d~Le~eFLkeA~~~~-mv~LKGh---RSVGGiRASlYNAisv~~~q~L~~ 360 (370)
T KOG2790|consen 294 YRCPVEPSV--------RSRM-NVPFRIEKDELEAEFLKEAAKEH-MVQLKGH---RSVGGIRASLYNAISVEEVQKLAA 360 (370)
T ss_pred EEcccchhh--------hhhc-ccceeecchHHHHHHHHHHHHhh-hhccccc---cccccchhhhhccccHHHHHHHHH
Confidence 333222221 1111 24445533 234444544444 4333333 235678999754 7888888888
Q ss_pred HHHhhh
Q 012785 450 RLSKIL 455 (456)
Q Consensus 450 ~L~~~l 455 (456)
-++++.
T Consensus 361 ~m~~F~ 366 (370)
T KOG2790|consen 361 FMKEFQ 366 (370)
T ss_pred HHHHHH
Confidence 887764
No 392
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=86.82 E-value=37 Score=34.15 Aligned_cols=284 Identities=12% Similarity=0.092 Sum_probs=143.0
Q ss_pred HHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcC--CC-----C-CCCcEEE-EeCCCCCChhhhhhhcCC---eEe
Q 012785 149 VVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSS--QD-----A-SEPISVV-SAAPYYSSYPSITDCVKS---RLY 216 (456)
Q Consensus 149 ia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~--~g-----d-~~~~~Vl-v~~P~y~~~~~~~~~~g~---~~~ 216 (456)
+++.....|.... .+.|+--.|+...++.+..+--+ |+ - .-|.-|+ +.+-++......+..+|+ .++
T Consensus 147 l~km~~ivGw~~~-~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~ 225 (510)
T KOG0629|consen 147 LAKMREIVGWEEG-GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCI 225 (510)
T ss_pred HHHHHHHhCCCCC-CCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeE
Confidence 4555566777664 45664444444444444332211 11 0 0121333 445677778888888883 455
Q ss_pred eeccCc------cccccC----CCe--E-EEEcCCCCCC---cccch-----HHhhhcCcEEEeeecCCCCCCCC-----
Q 012785 217 KWAGDA------KRFNKD----GPY--I-ELVTSPNNPD---GSVRQ-----SVVNRSGGILVHDLAYYWPQYTS----- 270 (456)
Q Consensus 217 ~~~~d~------~~l~~~----~~~--~-i~v~~P~NPt---G~~~~-----~l~~~~~~~iI~De~y~~~~~~~----- 270 (456)
.++.|. +++++. +.+ . .++ |.+--| |..=+ ++|++|++|+-+|.+|.+.-.-+
T Consensus 226 ~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~v-naTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~ 304 (510)
T KOG0629|consen 226 KVKTDERGKMIPDDLEKKILEAKAKGGVPFFV-NATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRH 304 (510)
T ss_pred EecccccCccchHHHHHHHHHHHhcCCCCeEE-EecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHh
Confidence 555443 334331 111 1 222 322212 33322 48999999999999998721111
Q ss_pred CCCCCCC-cEEEecCccccCCCCceEEEEEEeCHHHHHHHHHHHhhc------cCc-----CChHHHHH-----HHHHHH
Q 012785 271 ITYPADH-DLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELN------TIG-----VSKDSQLR-----AAKVLK 333 (456)
Q Consensus 271 ~~~~~~~-~i~i~S~SK~~g~~G~RiG~l~~~~~~~~~~l~~~~~~~------~~~-----~s~~~q~~-----a~~~L~ 333 (456)
....-++ .-+-.+..|.+| ..+..+..+...+.+.++..+....- .+. ...-.|-. -.-.|.
T Consensus 305 kl~Giera~SvtwnpHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlm 383 (510)
T KOG0629|consen 305 KLTGIERANSVTWNPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLM 383 (510)
T ss_pred hccCccccCceeecHHHhhc-CcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHH
Confidence 1111111 234566779888 66788777766444444433221100 000 11111211 001111
Q ss_pred hhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCcc-ccCCCCcccccccccCCCCCceEEeecC-------c-
Q 012785 334 VVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFS-VPELPSQFCTFLGRAFEPQPAFAWLKCE-------Q- 404 (456)
Q Consensus 334 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~g~~~~~~~~~~~~~~~f~~~~~~-------~- 404 (456)
.-..| ..-++...+..-+..+++.+.+++.+++. +..+..-+ .|+.+-..| .
T Consensus 384 wkaKG--------~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~-----------~nv~fw~vp~~lR~~~~~ 444 (510)
T KOG0629|consen 384 WKAKG--------TQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEH-----------VNVCFWYVPPSLRGWQEN 444 (510)
T ss_pred HHhcc--------cccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCce-----------EEEeeccCchHhccCccc
Confidence 11133 23455667777788899999998876432 22211111 112111112 1
Q ss_pred ---------cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecC---ChhHHHHHHHHHHhh
Q 012785 405 ---------EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLD---RDENYNLFVQRLSKI 454 (456)
Q Consensus 405 ---------~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~---~~e~i~~~l~~L~~~ 454 (456)
-...+...+.+.|-....-...+..++++|+.++. +.++++-+++.|..+
T Consensus 445 ~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 445 PERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred chhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 12334555666776665544455568899999875 577888888777654
No 393
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=86.08 E-value=16 Score=36.88 Aligned_cols=123 Identities=17% Similarity=0.143 Sum_probs=69.5
Q ss_pred CHHHHHHHHHHHHH-hcCc-------cCCCceEEEccCHHHHHHHHHHHhc------CCCC---C-----CCcEEEEeCC
Q 012785 142 EPEFAKEVVRLHKV-VGNA-------ITENHHIVVGTGSTQLFQAALYALS------SQDA---S-----EPISVVSAAP 199 (456)
Q Consensus 142 ~~~lr~aia~~~~~-~g~~-------~~~~~~I~~t~G~~~al~~~~~~l~------~~gd---~-----~~~~Vlv~~P 199 (456)
-.||+.-+-+|++. .+.+ ..++..|+.++.+..-+-.++.+-. +.+. . ..-.+...+-
T Consensus 111 ~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDq 190 (511)
T KOG0628|consen 111 CTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQ 190 (511)
T ss_pred hHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCc
Confidence 36888888888853 2222 1234567777665444433333221 1111 0 1124566788
Q ss_pred CCCChhhhhhhcCCeEeeeccCc------cccc----cC--C---CeEEEEcCC--CCCCccc-ch---HHhhhcCcEEE
Q 012785 200 YYSSYPSITDCVKSRLYKWAGDA------KRFN----KD--G---PYIELVTSP--NNPDGSV-RQ---SVVNRSGGILV 258 (456)
Q Consensus 200 ~y~~~~~~~~~~g~~~~~~~~d~------~~l~----~~--~---~~~i~v~~P--~NPtG~~-~~---~l~~~~~~~iI 258 (456)
........+...|+++..++.|. +.|+ .+ + +-.+ +.+- .|+.+.. +. .+|+++++|+-
T Consensus 191 ahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v-~at~GTT~~ca~D~l~elg~Vc~~~glWLH 269 (511)
T KOG0628|consen 191 AHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFV-CATLGTTSSCAFDELEELGPVCREEGLWLH 269 (511)
T ss_pred ccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEE-EEeecCccccccccHHHhcchhhhcCEEEE
Confidence 88888888888888887666553 2222 11 1 2222 2222 2232222 11 38999999999
Q ss_pred eeecCCC
Q 012785 259 HDLAYYW 265 (456)
Q Consensus 259 ~De~y~~ 265 (456)
+|.+|.+
T Consensus 270 VDAAYAG 276 (511)
T KOG0628|consen 270 VDAAYAG 276 (511)
T ss_pred eehhhcc
Confidence 9999996
No 394
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=84.39 E-value=40 Score=32.38 Aligned_cols=280 Identities=11% Similarity=0.104 Sum_probs=152.2
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCC----hhhhhhhcCCeEe-
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSS----YPSITDCVKSRLY- 216 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~----~~~~~~~~g~~~~- 216 (456)
+......++...+. .+++|.+.+.-+--++.++..+.+|... +.+|+++.-.|+. ...+++..|..+.
T Consensus 113 De~il~l~~~iVGA------~e~EvavmNsLTvNlh~Ll~sFyKPTek-R~KILlE~kaFPSDhYAiesQ~~lhG~~~e~ 185 (465)
T KOG3846|consen 113 DEPILPLLAPIVGA------QENEVAVMNSLTVNLHSLLISFYKPTEK-RFKILLEKKAFPSDHYAIESQCKLHGISPEN 185 (465)
T ss_pred chhhhhhhhhhccC------CchhhhhHhhhhhHHHHHHHHhcCCcch-hhhhhhccCCCCchHHHHHhhhhhcCCChHH
Confidence 34455555665553 4568999999999999999999887542 2289999887775 4455666676542
Q ss_pred ---eeccC--c---------cccccC--CCeEEEEcCCCCCCcccch--HHh---hhcCcEEEeeecCCCCCCCCCC-CC
Q 012785 217 ---KWAGD--A---------KRFNKD--GPYIELVTSPNNPDGSVRQ--SVV---NRSGGILVHDLAYYWPQYTSIT-YP 274 (456)
Q Consensus 217 ---~~~~d--~---------~~l~~~--~~~~i~v~~P~NPtG~~~~--~l~---~~~~~~iI~De~y~~~~~~~~~-~~ 274 (456)
.++.- + +-++.. ...+|+.+-.|.=||+... ++- +..|+++=.|-++.-. -.++- ..
T Consensus 186 sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvg-NVpL~LHd 264 (465)
T KOG3846|consen 186 SMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVG-NVPLQLHD 264 (465)
T ss_pred heEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhc-CCceEEee
Confidence 11110 1 112222 3456677778889999866 332 3477887778776521 12221 23
Q ss_pred CCCcEEEecCccccCCCCc-eEEEEEEeCHHHHHHHHHHHhh---------------------ccCcCChHHHHHHHHHH
Q 012785 275 ADHDLMLFTVSKSTGHAGT-RIGWALVKDMEVAKKMTKYIEL---------------------NTIGVSKDSQLRAAKVL 332 (456)
Q Consensus 275 ~~~~i~i~S~SK~~g~~G~-RiG~l~~~~~~~~~~l~~~~~~---------------------~~~~~s~~~q~~a~~~L 332 (456)
.+-++-++.--|.+. +|- -||-+.+..+...+...+.... ..+..|.+....+.++.
T Consensus 265 WgVDFACWCSYKYln-aGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~ 343 (465)
T KOG3846|consen 265 WGVDFACWCSYKYLN-AGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALR 343 (465)
T ss_pred cCCceEEEeeecccc-cCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHH
Confidence 455666666666553 221 3555555422222211111110 11222222222233333
Q ss_pred HhhhCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhc----CC-----------ccccCCCCcccccccccCCCCCce
Q 012785 333 KVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKS----GL-----------FSVPELPSQFCTFLGRAFEPQPAF 397 (456)
Q Consensus 333 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~----~~-----------~~~~~~~g~~~~~~~~~~~~~~~f 397 (456)
.++ +-+-+...+.+++|.-++...|+.+ .+ +++..|. .....|.-
T Consensus 344 ~SL-----------e~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~---------~~~erGcQ 403 (465)
T KOG3846|consen 344 SSL-----------ELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPT---------STDERGCQ 403 (465)
T ss_pred hhH-----------HHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCc---------ccccccce
Confidence 211 1222334555555555554444321 11 1122221 11223334
Q ss_pred EEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEec---CChhHHHHHHHHHHhhh
Q 012785 398 AWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISML---DRDENYNLFVQRLSKIL 455 (456)
Q Consensus 398 ~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~---~~~e~i~~~l~~L~~~l 455 (456)
+-+.+..+.+.+++.|.++|+.+-. ..++.||+.-. .+-.++..++..|.+++
T Consensus 404 Lsl~Fssp~~~vfqeL~krGv~~Dk-----R~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~ 459 (465)
T KOG3846|consen 404 LSLYFSSPTPKVFQELHKRGVIGDK-----RRPNVIRVAPVPLYNTFSDVYIFVNALNEAM 459 (465)
T ss_pred EEEEeCCCchHHHHHHHHcCeeccc-----cCCCceEeecchhhccHHHHHHHHHHHHHHH
Confidence 5555555678899999999998754 34889999843 36678888888888765
No 395
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=75.79 E-value=63 Score=29.41 Aligned_cols=93 Identities=13% Similarity=0.176 Sum_probs=52.6
Q ss_pred CceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCC-ChhhhhhhcCCeEeeeccCccccccCCCeEEEEcCCCCC
Q 012785 163 NHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYS-SYPSITDCVKSRLYKWAGDAKRFNKDGPYIELVTSPNNP 241 (456)
Q Consensus 163 ~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~-~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~i~v~~P~NP 241 (456)
...|++.-|+..|...+ +.|.+.|. +|.+-.|... ......+..+...+.=..+.+.+. +..+++....+-.
T Consensus 12 ~k~VlvvGgG~va~rKa-~~ll~~ga----~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~--~~~lviaAt~d~~ 84 (210)
T COG1648 12 GKKVLVVGGGSVALRKA-RLLLKAGA----DVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLD--DAFLVIAATDDEE 84 (210)
T ss_pred CCEEEEECCCHHHHHHH-HHHHhcCC----EEEEEcCCccHHHHHHHHhcCcchhhcccChhhhc--CceEEEEeCCCHH
Confidence 35677777777887766 45667777 8999999983 333334433433332122222222 2455555444333
Q ss_pred CcccchHHhhhcCcEE-Eeeec
Q 012785 242 DGSVRQSVVNRSGGIL-VHDLA 262 (456)
Q Consensus 242 tG~~~~~l~~~~~~~i-I~De~ 262 (456)
--.-..+.|+++++++ +.|+.
T Consensus 85 ln~~i~~~a~~~~i~vNv~D~p 106 (210)
T COG1648 85 LNERIAKAARERRILVNVVDDP 106 (210)
T ss_pred HHHHHHHHHHHhCCceeccCCc
Confidence 3333445788888776 45553
No 396
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=70.04 E-value=20 Score=38.38 Aligned_cols=162 Identities=15% Similarity=0.167 Sum_probs=100.2
Q ss_pred ceEEEccCHHHHHHHHHHHh---cCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcccc------c------cC
Q 012785 164 HHIVVGTGSTQLFQAALYAL---SSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKRF------N------KD 228 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l---~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l------~------~~ 228 (456)
-.|++......+-.++-... .+.-. .|++-++.........+..|++++.|. +...+ + ++
T Consensus 181 ~~iv~vd~~~k~~~ll~~~~~~~~~~LK----~iI~~~~~~~~~~~~~~~~gv~v~S~~-e~~~lG~~~~~~~~~~p~p~ 255 (691)
T KOG1256|consen 181 ISIVFVDNAKKAEKLLEIKENDSLPSLK----AIIQLDEPSDELKEKAENNGVEVYSWD-EFEELGKKNQRKPRVPPKPD 255 (691)
T ss_pred eeEEEEeCHHHHHHHHhhcccccCccce----eEEEecCCchhhhhhhhcCCeEEEEHH-HHHhhcccccCCCCCCCCcc
Confidence 46777777766543332222 11234 788888888888988888899998765 22111 1 11
Q ss_pred CCeEEEEcCC--CCCCcccchH--Hhh---------h-cCcEE-EeeecCCCCCCCCCCCCCCCcEEEecCccccCCCCc
Q 012785 229 GPYIELVTSP--NNPDGSVRQS--VVN---------R-SGGIL-VHDLAYYWPQYTSITYPADHDLMLFTVSKSTGHAGT 293 (456)
Q Consensus 229 ~~~~i~v~~P--~NPtG~~~~~--l~~---------~-~~~~i-I~De~y~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~ 293 (456)
....|+.++- .||=|+.++. ++. + ..... .-||+|- +|.|++...++++-+.++ .-|-
T Consensus 256 d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~l--SyLPLAHi~er~~~~~~~-----~~G~ 328 (691)
T KOG1256|consen 256 DLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYL--SYLPLAHIFERVVELYTF-----YIGA 328 (691)
T ss_pred ceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEE--EeCcHHHHHHHHHHHhHh-----hccc
Confidence 3355666654 7999999884 211 1 11112 2256555 677776667777666555 2567
Q ss_pred eEEEEEEeCHHHHHHHHHHHhhccCcCChHHHHHHHHHHHhhhC
Q 012785 294 RIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSD 337 (456)
Q Consensus 294 RiG~l~~~~~~~~~~l~~~~~~~~~~~s~~~q~~a~~~L~~~~~ 337 (456)
+|||.-.....+.+.++.++.....++|.+.-..-..+.+.+++
T Consensus 329 ~IgF~~gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~ 372 (691)
T KOG1256|consen 329 KIGFARGDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQK 372 (691)
T ss_pred EEEEecCChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhc
Confidence 89999875456777888887766777887766665555554433
No 397
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=68.84 E-value=1.7e+02 Score=31.36 Aligned_cols=87 Identities=9% Similarity=0.105 Sum_probs=56.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCcccccccccCCCCCceEEeecCccHHHHHHHHHhCCEEeecCCCC
Q 012785 347 ECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHF 426 (456)
Q Consensus 347 ~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~gI~v~pg~~f 426 (456)
.+-++.+.+++...--.|...|+..+ -+++. -.||+ -+-++|..+.+++.....+++|-++-
T Consensus 390 p~gL~~IArrvh~~T~~l~~~l~~ag-hel~~-----k~fFD--------TLkI~~~~s~~~~l~rA~~~~iNlr~---- 451 (1001)
T KOG2040|consen 390 PHGLKEIARRVHNLTLILAEGLKNAG-HELQH-----KPFFD--------TLKIRCGCSAEEVLDRAAKRQINLRL---- 451 (1001)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhcc-hhhcc-----ccccc--------eEEEEecCcHHHHHHHHHhhcCceEE----
Confidence 45666777777777777778887654 22221 12332 25566666777888777788777765
Q ss_pred CCCCCeEEEEecC--ChhHHHHHHHHHH
Q 012785 427 GFSPKYVRISMLD--RDENYNLFVQRLS 452 (456)
Q Consensus 427 g~~~~~iRis~~~--~~e~i~~~l~~L~ 452 (456)
.+++.+-+++-- ++++++.++..+.
T Consensus 452 -~ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 452 -VEDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred -eecCceEEeecccccHHHHHHHHHHHc
Confidence 357778888753 6778888887654
No 398
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=53.66 E-value=57 Score=29.54 Aligned_cols=92 Identities=14% Similarity=0.102 Sum_probs=51.2
Q ss_pred CceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcC-CeEeeeccCccccccCCCeEEEEcCCCCC
Q 012785 163 NHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVK-SRLYKWAGDAKRFNKDGPYIELVTSPNNP 241 (456)
Q Consensus 163 ~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g-~~~~~~~~d~~~l~~~~~~~i~v~~P~NP 241 (456)
...|++.-|+..|...+ +.|.+.|. .|.+-+|............| ++.+.=+.+.+.++ +..+ ++..|++|
T Consensus 9 gk~vlVvGgG~va~rk~-~~Ll~~ga----~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~dl~--~~~l-Vi~at~d~ 80 (205)
T TIGR01470 9 GRAVLVVGGGDVALRKA-RLLLKAGA----QLRVIAEELESELTLLAEQGGITWLARCFDADILE--GAFL-VIAATDDE 80 (205)
T ss_pred CCeEEEECcCHHHHHHH-HHHHHCCC----EEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHHHhC--CcEE-EEECCCCH
Confidence 35677777777777666 45666676 78888887764433333233 33322122222222 3334 44567666
Q ss_pred -CcccchHHhhhcCcEE-Eeeec
Q 012785 242 -DGSVRQSVVNRSGGIL-VHDLA 262 (456)
Q Consensus 242 -tG~~~~~l~~~~~~~i-I~De~ 262 (456)
.-..+-..|++.++++ +.|+.
T Consensus 81 ~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 81 ELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred HHHHHHHHHHHHcCCEEEECCCc
Confidence 4444445788888877 45653
No 399
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=28.92 E-value=1.1e+02 Score=21.45 Aligned_cols=45 Identities=9% Similarity=0.103 Sum_probs=33.3
Q ss_pred HHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 406 IEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 406 ~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
...+.+.|.+.+|.+.. .+..-+++++..++++.++++++|.+.+
T Consensus 17 ~~~~~~~L~~~~i~~i~-----~~~s~~~is~vv~~~d~~~av~~LH~~f 61 (63)
T cd04920 17 LGPALEVFGKKPVHLVS-----QAANDLNLTFVVDEDQADGLCARLHFQL 61 (63)
T ss_pred HHHHHHHHhcCCceEEE-----EeCCCCeEEEEEeHHHHHHHHHHHHHHH
Confidence 45666777788887754 2345678988778899999999987653
No 400
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=26.57 E-value=1.6e+02 Score=20.88 Aligned_cols=47 Identities=15% Similarity=0.172 Sum_probs=34.4
Q ss_pred HHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 406 IEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 406 ~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
...+...|.+.||-+.--. .+..-+++++..++++.++++++|.+.+
T Consensus 18 ~~ki~~~L~~~~I~v~~i~---~~~s~~~is~~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 18 LARGLAALAEAGIEPIAAH---QSMRNVDVQFVVDRDDYDNAIKALHAAL 64 (66)
T ss_pred HHHHHHHHHHCCCCEEEEE---ecCCeeEEEEEEEHHHHHHHHHHHHHHH
Confidence 4567777889999883211 2344578998778899999999998754
No 401
>PF05127 Helicase_RecD: Helicase; InterPro: IPR007807 This domain is about 350 amino acid residues long and appears to have a P-loop motif, suggesting this is an ATPase. This domain is often N-terminal to a GCN5-related N-acetyltransferase domain IPR000182 from INTERPRO and C-terminal to IPR013562 from INTERPRO.; PDB: 2ZPA_B.
Probab=25.60 E-value=53 Score=29.04 Aligned_cols=44 Identities=18% Similarity=0.257 Sum_probs=24.8
Q ss_pred ccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeE
Q 012785 169 GTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRL 215 (456)
Q Consensus 169 t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~ 215 (456)
+.|=+.++-+++..+...+.. +|++..|+..+....++.+...+
T Consensus 7 GRGKSa~lGl~~a~l~~~~~~---~I~vtAP~~~~~~~lf~~~~~~l 50 (177)
T PF05127_consen 7 GRGKSAALGLAAAALIQKGKI---RILVTAPSPENVQTLFEFAEKGL 50 (177)
T ss_dssp TSSHHHHHHHCCCCSSS--------EEEE-SS--S-HHHHHCC----
T ss_pred CCCHHHHHHHHHHHHHHhcCc---eEEEecCCHHHHHHHHHHHHhhc
Confidence 356677777777777666543 79999999999999998875443
No 402
>PF05687 DUF822: Plant protein of unknown function (DUF822); InterPro: IPR008540 This group of proteins contains members of the BZR1/LAT61 family of plant transcriptional repressors involved in controlling the response to Brassinosteroids (BRs). BRs are plant hormones that play essential roles in growth and development. BZR1 binds directly to DNA repressing the synthesis of genes involved in BR synthesis. Phosphorylation of BZR1 by BIN1 targets BZR1 to the 20S proteosome, while dephosphorylation leads to nuclear accumulation of BZR1 [].
Probab=25.25 E-value=1.8e+02 Score=24.59 Aligned_cols=18 Identities=6% Similarity=-0.029 Sum_probs=14.4
Q ss_pred cHHHHHHHHHhCCEEeec
Q 012785 405 EIEDCESFLKGNKILTRS 422 (456)
Q Consensus 405 ~~~~~~~~l~~~gI~v~p 422 (456)
..+.+..+++|+|..|-+
T Consensus 47 ~NeVLkALc~eAGw~Ve~ 64 (150)
T PF05687_consen 47 NNEVLKALCREAGWTVEP 64 (150)
T ss_pred HHHHHHHHHHhCCEEEcc
Confidence 355667888999999987
No 403
>PRK10637 cysG siroheme synthase; Provisional
Probab=25.22 E-value=7.6e+02 Score=25.37 Aligned_cols=93 Identities=10% Similarity=0.005 Sum_probs=52.9
Q ss_pred CceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcC-CeEeeeccCccccccCCCeEEEEcCCCCC
Q 012785 163 NHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVK-SRLYKWAGDAKRFNKDGPYIELVTSPNNP 241 (456)
Q Consensus 163 ~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g-~~~~~~~~d~~~l~~~~~~~i~v~~P~NP 241 (456)
..+|++.-|+.-|...+- .|.+.|. +|.+-.|.+..-.......| ++...=+.+.+.++ +..+++....+.-
T Consensus 12 ~~~vlvvGgG~vA~rk~~-~ll~~ga----~v~visp~~~~~~~~l~~~~~i~~~~~~~~~~dl~--~~~lv~~at~d~~ 84 (457)
T PRK10637 12 DRDCLLVGGGDVAERKAR-LLLDAGA----RLTVNALAFIPQFTAWADAGMLTLVEGPFDESLLD--TCWLAIAATDDDA 84 (457)
T ss_pred CCEEEEECCCHHHHHHHH-HHHHCCC----EEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhC--CCEEEEECCCCHH
Confidence 468888888888888775 4556666 78888888775443333222 33333222223332 3345555433322
Q ss_pred CcccchHHhhhcCcEE-Eeeec
Q 012785 242 DGSVRQSVVNRSGGIL-VHDLA 262 (456)
Q Consensus 242 tG~~~~~l~~~~~~~i-I~De~ 262 (456)
....+.+.|++.++++ +.|+.
T Consensus 85 ~n~~i~~~a~~~~~lvN~~d~~ 106 (457)
T PRK10637 85 VNQRVSEAAEARRIFCNVVDAP 106 (457)
T ss_pred HhHHHHHHHHHcCcEEEECCCc
Confidence 2333445788888876 46653
No 404
>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=25.06 E-value=70 Score=29.76 Aligned_cols=86 Identities=19% Similarity=0.263 Sum_probs=46.3
Q ss_pred CCeEEEEcCCCC-CCcccchHHhhhc-CcEEEee--ecCCCCCCCCCCCCCCCcEEEecCccccCCCCceEEE--EEEeC
Q 012785 229 GPYIELVTSPNN-PDGSVRQSVVNRS-GGILVHD--LAYYWPQYTSITYPADHDLMLFTVSKSTGHAGTRIGW--ALVKD 302 (456)
Q Consensus 229 ~~~~i~v~~P~N-PtG~~~~~l~~~~-~~~iI~D--e~y~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~RiG~--l~~~~ 302 (456)
.++.|++--|+. ||..++.+++... .-=+|+| ..|+..+...-....+..|...-..-+=|+.|.|-|| ++..+
T Consensus 59 ~pr~vWlMvPag~it~~vi~~la~~L~~GDivIDGGNS~y~Ds~rr~~~l~~kgi~flD~GTSGG~~G~~~G~~lMiGG~ 138 (300)
T COG1023 59 APRIVWLMVPAGDITDAVIDDLAPLLSAGDIVIDGGNSNYKDSLRRAKLLAEKGIHFLDVGTSGGVWGAERGYCLMIGGD 138 (300)
T ss_pred CCcEEEEEccCCCchHHHHHHHHhhcCCCCEEEECCccchHHHHHHHHHHHhcCCeEEeccCCCCchhhhcCceEEecCc
Confidence 568888888864 9999999876542 2234556 3333211111111122223222222223567777776 45556
Q ss_pred HHHHHHHHHHHh
Q 012785 303 MEVAKKMTKYIE 314 (456)
Q Consensus 303 ~~~~~~l~~~~~ 314 (456)
++..+++..+..
T Consensus 139 ~~a~~~~~pif~ 150 (300)
T COG1023 139 EEAVERLEPIFK 150 (300)
T ss_pred HHHHHHHHHHHH
Confidence 777777766543
No 405
>PRK08246 threonine dehydratase; Provisional
Probab=24.21 E-value=2.8e+02 Score=26.73 Aligned_cols=73 Identities=10% Similarity=-0.016 Sum_probs=47.0
Q ss_pred CHHHHHHHHHHHHHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC
Q 012785 142 EPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD 221 (456)
Q Consensus 142 ~~~lr~aia~~~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d 221 (456)
+-..|-++........ ....|+..+++..++.++..+-...-. ..|+++...-.......+.+|++++..+.+
T Consensus 51 S~K~R~a~~~~~~~~~----~~~~vv~aSsGN~g~a~A~~a~~~G~~---~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 123 (310)
T PRK08246 51 SFKARGAFNRLLAAPV----PAAGVVAASGGNAGLAVAYAAAALGVP---ATVFVPETAPPAKVARLRALGAEVVVVGAE 123 (310)
T ss_pred CCHHHHHHHHHHhhcc----cCCeEEEeCCCHHHHHHHHHHHHcCCC---EEEEECCCCcHHHHHHHHHCCCEEEEeCCC
Confidence 3555665554433211 245788888888888887765433222 167777766556677889999999877643
No 406
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=23.41 E-value=5.4e+02 Score=24.91 Aligned_cols=56 Identities=13% Similarity=-0.008 Sum_probs=36.1
Q ss_pred CceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccC
Q 012785 163 NHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGD 221 (456)
Q Consensus 163 ~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d 221 (456)
.+.|+..+++..+..++..+-...-+ ..|+++.-.-......++.+|++++.++.+
T Consensus 51 ~~~vv~aSsGN~g~alA~~a~~~G~~---~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 51 CVHVVCSSGGNAGLAAAYAARKLGVP---CTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred CCeEEEeCCcHHHHHHHHHHHHcCCC---EEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 34677777777887776655432222 156666544445577888899999877654
No 407
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=22.51 E-value=3.4e+02 Score=27.84 Aligned_cols=86 Identities=15% Similarity=0.078 Sum_probs=49.5
Q ss_pred EEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCccccccCCCeEEEEcCCCCCCccc
Q 012785 166 IVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKRFNKDGPYIELVTSPNNPDGSV 245 (456)
Q Consensus 166 I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~i~v~~P~NPtG~~ 245 (456)
.+++-|. .++..+.+.|...|. +|.+.+..-......++..|+++.. ..+.+.++ +..+|++ +|.=|....
T Consensus 11 ~viG~G~-sG~s~~a~~L~~~G~----~V~~~D~~~~~~~~~l~~~gi~~~~-~~~~~~~~--~~d~vv~-spgi~~~~~ 81 (461)
T PRK00421 11 HFVGIGG-IGMSGLAEVLLNLGY----KVSGSDLKESAVTQRLLELGAIIFI-GHDAENIK--DADVVVY-SSAIPDDNP 81 (461)
T ss_pred EEEEEch-hhHHHHHHHHHhCCC----eEEEECCCCChHHHHHHHCCCEEeC-CCCHHHCC--CCCEEEE-CCCCCCCCH
Confidence 5667776 556666677888887 7888775433233334455776653 22333343 3455555 665443333
Q ss_pred chHHhhhcCcEEEee
Q 012785 246 RQSVVNRSGGILVHD 260 (456)
Q Consensus 246 ~~~l~~~~~~~iI~D 260 (456)
.-+.+++.++.++.+
T Consensus 82 ~~~~a~~~~i~i~~~ 96 (461)
T PRK00421 82 ELVAARELGIPVVRR 96 (461)
T ss_pred HHHHHHHCCCcEEeH
Confidence 334566788888866
No 408
>PRK06450 threonine synthase; Validated
Probab=22.39 E-value=1.8e+02 Score=28.57 Aligned_cols=76 Identities=8% Similarity=0.065 Sum_probs=46.5
Q ss_pred ceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcccccc--CCCeEEEEcCCCCC
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKRFNK--DGPYIELVTSPNNP 241 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~--~~~~~i~v~~P~NP 241 (456)
..|+..+++..+..++..+-...-. ..|+++.-.-..-....+.+|++++.++.+.+.... .+...+++.++.||
T Consensus 98 ~~vv~aSsGN~g~slA~~aa~~G~~---~~i~vP~~~~~~k~~~i~~~GA~vi~v~~~~~~~~~~a~~~g~~~~~~~~np 174 (338)
T PRK06450 98 KQISEDSSGNAGASIAAYGAAAGIE---VKIFVPETASGGKLKQIESYGAEVVRVRGSREDVAKAAENSGYYYASHVLQP 174 (338)
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCC---EEEEEcCCCCHHHHHHHHHcCCEEEEECCCHHHHHHHHHhcCeEeccCCCCc
Confidence 4677777777777777665432222 167776655445667888899999988766543321 12234555555666
Q ss_pred C
Q 012785 242 D 242 (456)
Q Consensus 242 t 242 (456)
-
T Consensus 175 ~ 175 (338)
T PRK06450 175 Q 175 (338)
T ss_pred c
Confidence 4
No 409
>COG4050 Uncharacterized protein conserved in archaea [Function unknown]
Probab=22.35 E-value=2.2e+02 Score=23.11 Aligned_cols=48 Identities=19% Similarity=0.389 Sum_probs=31.6
Q ss_pred eEEeecCccHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhhC
Q 012785 397 FAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKILS 456 (456)
Q Consensus 397 f~~~~~~~~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l~ 456 (456)
|-.+.|....+.+..+++++||-+ +++-+..++|+-..+++.|..+|+
T Consensus 98 FGCiGC~RTNEl~~ylvR~k~iPi------------LelkYP~s~Eea~~~VnkI~~FL~ 145 (152)
T COG4050 98 FGCIGCARTNELCVYLVRRKGIPI------------LELKYPRSEEEAIDFVNKIANFLK 145 (152)
T ss_pred cceecccccchHHHHHhhhcCCce------------EEEeCCCcHHHHHHHHHHHHHHHH
Confidence 344455444555666666666554 467776688888888988888764
No 410
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=21.70 E-value=3.6e+02 Score=27.84 Aligned_cols=100 Identities=14% Similarity=0.037 Sum_probs=55.3
Q ss_pred CceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEE--eCCCCCChhhh--hhhcCCeEeeeccCccccc-cCCCeEEEEcC
Q 012785 163 NHHIVVGTGSTQLFQAALYALSSQDASEPISVVS--AAPYYSSYPSI--TDCVKSRLYKWAGDAKRFN-KDGPYIELVTS 237 (456)
Q Consensus 163 ~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv--~~P~y~~~~~~--~~~~g~~~~~~~~d~~~l~-~~~~~~i~v~~ 237 (456)
+..+++|-|....++.++.-...-|... +|+| ..|.+.+.... +...|.++-..-+..-... .+-+++++=.+
T Consensus 359 dgdviltyg~s~vV~~ill~A~~~~k~f--rVvVVDSRP~~EG~~~lr~Lv~~GinctYv~I~a~syim~evtkvfLGah 436 (556)
T KOG1467|consen 359 DGDVLLTYGSSSVVNMILLEAKELGKKF--RVVVVDSRPNLEGRKLLRRLVDRGINCTYVLINAASYIMLEVTKVFLGAH 436 (556)
T ss_pred cCCEEEEecchHHHHHHHHHHHHhCcce--EEEEEeCCCCcchHHHHHHHHHcCCCeEEEEehhHHHHHHhcceeeechh
Confidence 4578999999998888776554433322 4444 35887775543 3334766654443322211 12233333222
Q ss_pred CCCCCcccchH--------HhhhcCcEEE-eeecCC
Q 012785 238 PNNPDGSVRQS--------VVNRSGGILV-HDLAYY 264 (456)
Q Consensus 238 P~NPtG~~~~~--------l~~~~~~~iI-~De~y~ 264 (456)
-----|.+|++ +++.+|+++| .=|.|-
T Consensus 437 ailsNG~vysR~GTa~valvAna~nVPVlVCCE~yK 472 (556)
T KOG1467|consen 437 AILSNGAVYSRVGTACVALVANAFNVPVLVCCEAYK 472 (556)
T ss_pred hhhcCcchhhhcchHHHHHHhcccCCCEEEEechhh
Confidence 21122888885 4577999765 456664
No 411
>cd04891 ACT_AK-LysC-DapG-like_1 ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII and related proteins. This CD includes the N-terminal of the two ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, as well as, the first and third, of four, ACT domains present in cyanobacteria AK. Also included are the N-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase isoenzyme AKI found in Bacilli (Bacillus subtilis strain 168), Clostridia, and Actinobacteria bacterial species. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=21.65 E-value=1.8e+02 Score=19.33 Aligned_cols=46 Identities=13% Similarity=-0.130 Sum_probs=29.8
Q ss_pred HHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHH
Q 012785 406 IEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRL 451 (456)
Q Consensus 406 ~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L 451 (456)
...+...|.++||.+.--......++...++|..++++.+.+++.|
T Consensus 15 ~~~i~~~L~~~~i~i~~i~~~~~~~~~~~is~~v~~~~~~~~~~~l 60 (61)
T cd04891 15 AAKIFSALAEAGINVDMIVQSVSRGGTTDISFTVPKSDLEKALAIL 60 (61)
T ss_pred HHHHHHHHHHcCCcEEEEEEcCCCCCcEEEEEEEeHHHHHHHHHHh
Confidence 4567888889998875322111123347888876888888777655
No 412
>cd04937 ACT_AKi-DapG-BS_2 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive AK isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The BS AKI is tetrameric consisting of two alpha and two beta subunits; th
Probab=21.31 E-value=1.9e+02 Score=20.21 Aligned_cols=46 Identities=15% Similarity=0.083 Sum_probs=35.0
Q ss_pred cHHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 405 EIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 405 ~~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
-...+...|.++||.+.-.. ..-..+++..++++.++++++|.+.+
T Consensus 17 i~~~if~aL~~~~I~v~~~~-----~Se~~is~~v~~~~~~~av~~Lh~~f 62 (64)
T cd04937 17 VMAKIVGALSKEGIEILQTA-----DSHTTISCLVSEDDVKEAVNALHEAF 62 (64)
T ss_pred HHHHHHHHHHHCCCCEEEEE-----cCccEEEEEEcHHHHHHHHHHHHHHh
Confidence 35677888899999986422 24568888778899999999998765
No 413
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=21.20 E-value=4.1e+02 Score=25.67 Aligned_cols=100 Identities=13% Similarity=0.180 Sum_probs=54.3
Q ss_pred HHHHHHHHHH----HHhcCccCCCceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeec
Q 012785 144 EFAKEVVRLH----KVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWA 219 (456)
Q Consensus 144 ~lr~aia~~~----~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~ 219 (456)
..+..+|.++ ...|. ..+...|+=.+++.-++.+++-+-...-. ..+++|+-.=.......+++|++++..+
T Consensus 40 SvKDR~A~~mI~~Ae~~G~-l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~---~iivmP~~~S~er~~~l~a~GAevi~t~ 115 (300)
T COG0031 40 SVKDRIALYMIEDAEKRGL-LKPGGTIVEATSGNTGIALAMVAAAKGYR---LIIVMPETMSQERRKLLRALGAEVILTP 115 (300)
T ss_pred chhHHHHHHHHHHHHHcCC-CCCCCEEEEcCCChHHHHHHHHHHHcCCc---EEEEeCCCCCHHHHHHHHHcCCEEEEcC
Confidence 3555555554 23333 33455677555555667766655443333 1344444333457778999999999877
Q ss_pred cCcccc----c------cCCC-eEEEE---cCCCCCCcccch
Q 012785 220 GDAKRF----N------KDGP-YIELV---TSPNNPDGSVRQ 247 (456)
Q Consensus 220 ~d~~~l----~------~~~~-~~i~v---~~P~NPtG~~~~ 247 (456)
.+...+ + ...+ .+++. .||.||-.+..+
T Consensus 116 ~~~g~~~~a~~~a~el~~~~p~~~~~~~Qf~NpaN~~aH~~t 157 (300)
T COG0031 116 GAPGNMKGAIERAKELAAEIPGYAVWLNQFENPANPEAHYET 157 (300)
T ss_pred CCCCchHHHHHHHHHHHHhCCCceEchhhcCCCccHHHHHhh
Confidence 532212 1 1122 35554 567777666533
No 414
>PLN02970 serine racemase
Probab=21.19 E-value=1.8e+02 Score=28.38 Aligned_cols=57 Identities=9% Similarity=-0.111 Sum_probs=40.6
Q ss_pred ceEEEccCHHHHHHHHHHHhcCCCCCCCcEEEEeCCCCCChhhhhhhcCCeEeeeccCcc
Q 012785 164 HHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAK 223 (456)
Q Consensus 164 ~~I~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~ 223 (456)
+.|+..+++..++.++..+-...-+ ..|+++..+...-....+.+|++++.++.+.+
T Consensus 76 ~~vv~aSsGN~g~alA~~a~~~G~~---~~ivvp~~~~~~k~~~~~~~GA~Vi~~~~~~~ 132 (328)
T PLN02970 76 KGVVTHSSGNHAAALALAAKLRGIP---AYIVVPKNAPACKVDAVIRYGGIITWCEPTVE 132 (328)
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCC---EEEEECCCCCHHHHHHHHhcCCEEEEeCCCHH
Confidence 4688888888888777765533222 16777776666667788999999998876544
No 415
>cd04922 ACT_AKi-HSDH-ThrA_2 ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). This CD includes the second of two ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). The ACT domains are positioned between the N-terminal catalytic domain of AK and the C-terminal HSDH domain found in bacteria (Escherichia coli (EC) ThrA) and higher plants (Zea mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. HSDH is the first committed reaction in the branch of the pathway that leads to Thr and Met. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathwa
Probab=20.08 E-value=2.2e+02 Score=19.59 Aligned_cols=47 Identities=13% Similarity=0.034 Sum_probs=32.4
Q ss_pred HHHHHHHHHhCCEEeecCCCCCCCCCeEEEEecCChhHHHHHHHHHHhhh
Q 012785 406 IEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKIL 455 (456)
Q Consensus 406 ~~~~~~~l~~~gI~v~pg~~fg~~~~~iRis~~~~~e~i~~~l~~L~~~l 455 (456)
...+.+.|.++||.+.--. .+. .-.+++|..++++.++++++|.+.+
T Consensus 18 ~~~i~~~l~~~~I~v~~i~-~~~--s~~~is~~v~~~~~~~~~~~lh~~~ 64 (66)
T cd04922 18 AATFFSALAKANVNIRAIA-QGS--SERNISAVIDEDDATKALRAVHERF 64 (66)
T ss_pred HHHHHHHHHHCCCCEEEEE-ecC--cccEEEEEEeHHHHHHHHHHHHHHH
Confidence 5567888899998773211 111 2278888778888888898887654
Done!