BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012788
(456 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225431820|ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 457
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/430 (79%), Positives = 385/430 (89%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
MKM + LL++L L +A+ NG+ GQC + TLDPRPHSVSI EFGAVGDGKTLNT+AF
Sbjct: 1 MKMLLPLLVILVLSNAVESNGQERGGQCTNSLTLDPRPHSVSILEFGAVGDGKTLNTIAF 60
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
QNAIFYLKSFADKGGAQLYVP GKWLTGSFNLTSHLTLFLE+GAVILGSQ+PSHW+V++P
Sbjct: 61 QNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLERGAVILGSQDPSHWEVIEP 120
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLV 180
LPSYGRGIELPG RY+SLINGYMLRDVV+TGDNGTI+GQGSVWWDWF+S SLNYSRPHLV
Sbjct: 121 LPSYGRGIELPGGRYRSLINGYMLRDVVITGDNGTINGQGSVWWDWFTSHSLNYSRPHLV 180
Query: 181 EFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCI 240
EF++S NVVVSNLTFLNAPAYNIHPVYCSNV +QNISV+APPESPYTVGIVPDSSD+ CI
Sbjct: 181 EFLASTNVVVSNLTFLNAPAYNIHPVYCSNVRVQNISVYAPPESPYTVGIVPDSSDSTCI 240
Query: 241 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 300
EDC IAMGHDAI+LKSGWDEYGIAYGRPTT+VHIRRV LQSSSGSS+AFGSEMSGGISNV
Sbjct: 241 EDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSEMSGGISNV 300
Query: 301 QVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
VE++HLY+S +GIEFRTTKGRGGYI++I+ISD + NI+ AF A G GSHPDD FDP+
Sbjct: 301 CVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSHPDDHFDPN 360
Query: 361 ALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGS 420
ALP +D IT +++IGTNITIAG+FTGIQE+PF +ICLSNISLS P + SW CSN+ G
Sbjct: 361 ALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLSTTPPASISWVCSNVSGF 420
Query: 421 SESVFPEPCP 430
S+ VFPEPCP
Sbjct: 421 SQWVFPEPCP 430
>gi|296083315|emb|CBI22951.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/415 (80%), Positives = 374/415 (90%)
Query: 16 AILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGG 75
A+ NG+ GQC + TLDPRPHSVSI EFGAVGDGKTLNT+AFQNAIFYLKSFADKGG
Sbjct: 14 AVESNGQERGGQCTNSLTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGG 73
Query: 76 AQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRY 135
AQLYVP GKWLTGSFNLTSHLTLFLE+GAVILGSQ+PSHW+V++PLPSYGRGIELPG RY
Sbjct: 74 AQLYVPPGKWLTGSFNLTSHLTLFLERGAVILGSQDPSHWEVIEPLPSYGRGIELPGGRY 133
Query: 136 KSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTF 195
+SLINGYMLRDVV+TGDNGTI+GQGSVWWDWF+S SLNYSRPHLVEF++S NVVVSNLTF
Sbjct: 134 RSLINGYMLRDVVITGDNGTINGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNLTF 193
Query: 196 LNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLK 255
LNAPAYNIHPVYCSNV +QNISV+APPESPYTVGIVPDSSD+ CIEDC IAMGHDAI+LK
Sbjct: 194 LNAPAYNIHPVYCSNVRVQNISVYAPPESPYTVGIVPDSSDSTCIEDCSIAMGHDAIALK 253
Query: 256 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 315
SGWDEYGIAYGRPTT+VHIRRV LQSSSGSS+AFGSEMSGGISNV VE++HLY+S +GIE
Sbjct: 254 SGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSEMSGGISNVCVEQVHLYNSFSGIE 313
Query: 316 FRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 375
FRTTKGRGGYI++I+ISD + NI+ AF A G GSHPDD FDP+ALP +D IT +++IG
Sbjct: 314 FRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSHPDDHFDPNALPVLDHITLQNVIG 373
Query: 376 TNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCP 430
TNITIAG+FTGIQE+PF +ICLSNISLS P + SW CSN+ G S+ VFPEPCP
Sbjct: 374 TNITIAGSFTGIQESPFTSICLSNISLSTTPPASISWVCSNVSGFSQWVFPEPCP 428
>gi|255551873|ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communis]
gi|223544070|gb|EEF45596.1| Polygalacturonase, putative [Ricinus communis]
Length = 454
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/456 (75%), Positives = 402/456 (88%), Gaps = 4/456 (0%)
Query: 3 MPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQN 62
MPVALLLLLAL +AI+I GE S GQCD++P+LDPRPHSVSI EFGAVGDGKTLNT++FQN
Sbjct: 1 MPVALLLLLALSNAIVIYGEESSGQCDNKPSLDPRPHSVSILEFGAVGDGKTLNTISFQN 60
Query: 63 AIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLP 122
AIFYLKSFADKGGA+LYVP G+WLTGSFNLTSHLTLFLEKGAVILGSQ+PSH+D+++PLP
Sbjct: 61 AIFYLKSFADKGGAKLYVPPGRWLTGSFNLTSHLTLFLEKGAVILGSQDPSHYDLIEPLP 120
Query: 123 SYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEF 182
SYGRGIELPG RY+SLINGY LRDVV+TGDNGTIDGQGSVWWDWF+S SLNYSRPHLVEF
Sbjct: 121 SYGRGIELPGGRYRSLINGYKLRDVVITGDNGTIDGQGSVWWDWFNSHSLNYSRPHLVEF 180
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
I SE +VVSNLTFLNAPAYNIHPVYCSNV +QN+S+ APPESP T+GIVPDSS+NVCIE+
Sbjct: 181 IESERIVVSNLTFLNAPAYNIHPVYCSNVLVQNMSLSAPPESPQTIGIVPDSSNNVCIEE 240
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQV 302
II MG+DAISLKSGWDEYGIAY R T DVHIRRV LQSSSGSS+AFGSEMSGGISNV V
Sbjct: 241 SIIKMGYDAISLKSGWDEYGIAYDRATRDVHIRRVHLQSSSGSSIAFGSEMSGGISNVHV 300
Query: 303 EKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDAL 362
E++HLY+S +GI FRTTKGRGGYI++I ISD EL NIN+A GA G+ G HPDD FDP A+
Sbjct: 301 EQVHLYNSFSGIGFRTTKGRGGYIKRIFISDVELENINLALGAIGDHGLHPDDKFDPKAV 360
Query: 363 PAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSE 422
P +DQIT +++ GTNI+ AGNFTGIQ++PF ++CL NI+L ++ S NSW CSN+ G S+
Sbjct: 361 PVVDQITLQNLTGTNISTAGNFTGIQDSPFTSLCLFNITLMVS--SSNSWTCSNVIGYSD 418
Query: 423 SVFPEPCPELENSSSNSSSTCFS--LIRYYGRASFL 456
SVFP PCPEL++ SNSSS C+S L+ YG+++ L
Sbjct: 419 SVFPVPCPELKSPYSNSSSACYSLLLLNSYGKSASL 454
>gi|224130360|ref|XP_002328589.1| predicted protein [Populus trichocarpa]
gi|222838571|gb|EEE76936.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/454 (76%), Positives = 396/454 (87%), Gaps = 6/454 (1%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
MKMPVA+LLLLAL AI I+ E S C +P+L PRPHSVSI EFGAVGDGKTLNTLAF
Sbjct: 1 MKMPVAVLLLLALSIAIRIDAEESSEVCGFKPSLKPRPHSVSILEFGAVGDGKTLNTLAF 60
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
QNAIFYLKSF DKGGAQLYVP GKWLTGSF+LTSHLTLF+EKGAVILGSQ+PSHWD+VDP
Sbjct: 61 QNAIFYLKSFTDKGGAQLYVPPGKWLTGSFSLTSHLTLFVEKGAVILGSQDPSHWDLVDP 120
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLV 180
LPSYGRGIELPG+RY+SLING ML DVVVTGDNGTIDGQGSVWWDWF S SLNYSRPHLV
Sbjct: 121 LPSYGRGIELPGKRYQSLINGDMLHDVVVTGDNGTIDGQGSVWWDWFESHSLNYSRPHLV 180
Query: 181 EFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCI 240
EF SS+ VVVSNLTFLNAPAY+IHPVYCSNV +QNISV AP ESPYT+GIVPDSS+NVCI
Sbjct: 181 EFTSSDYVVVSNLTFLNAPAYSIHPVYCSNVVVQNISVSAPGESPYTIGIVPDSSNNVCI 240
Query: 241 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 300
ED I +G+DAISLKSGWDEYGIAY RPTTDV+IRRV LQSSSGSSVAFGSEMSGGISNV
Sbjct: 241 EDSRIEVGYDAISLKSGWDEYGIAYDRPTTDVYIRRVYLQSSSGSSVAFGSEMSGGISNV 300
Query: 301 QVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
VE++H+Y+S +GIEFRTTKGRGGYI++I+ISD EL N N AFGA G+CGSHPDD+FDP+
Sbjct: 301 HVEQVHIYNSFSGIEFRTTKGRGGYIKRIIISDVELKNTNTAFGAIGDCGSHPDDNFDPN 360
Query: 361 ALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGS 420
A+P +DQIT + +IG+NIT+AGNFTG+ E+PF ++CL N+SL+I + + W CSN+ G
Sbjct: 361 AIPVLDQITLQGVIGSNITMAGNFTGLAESPFTSLCLFNVSLAIR-NTLSPWTCSNVVGF 419
Query: 421 SESVFPEPCPELENSSSNSSSTCFSLIRYYGRAS 454
SESV PEPCPELE SSS C+SL+ YG+++
Sbjct: 420 SESVSPEPCPELE-----SSSVCYSLLNSYGKST 448
>gi|356529330|ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 452
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/441 (74%), Positives = 384/441 (87%), Gaps = 2/441 (0%)
Query: 15 SAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKG 74
+A+ +NG+ GQC PTLDPRPHSVSI EFGAVGDGKTLNT+AFQNAIFYLKSFADKG
Sbjct: 13 NAVRVNGD--GGQCGSNPTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKG 70
Query: 75 GAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRR 134
GAQLYVP GKWLTGSFNLTSHLTLFLEKGAV++G+Q+PSHWDVV+PLPSYGRG+E+PG R
Sbjct: 71 GAQLYVPPGKWLTGSFNLTSHLTLFLEKGAVLIGTQDPSHWDVVEPLPSYGRGLEVPGGR 130
Query: 135 YKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLT 194
Y+SLINGYML DVVVTG+NGTIDG G VWWDW+S+ SLN+SRPHLVEF++S+ VVVSNLT
Sbjct: 131 YQSLINGYMLHDVVVTGNNGTIDGMGMVWWDWYSTHSLNHSRPHLVEFVASDYVVVSNLT 190
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
FLNAPAY+IHPVYCS+VHIQN+S+ PPESPYTVGIVPDSSDNVCIEDCI+AMG DAISL
Sbjct: 191 FLNAPAYSIHPVYCSHVHIQNVSISTPPESPYTVGIVPDSSDNVCIEDCIVAMGFDAISL 250
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
KSGWDEYGIAYGRPT +VHIRRV L + SGS++AFGS+MSGGISNV VE HL++S +GI
Sbjct: 251 KSGWDEYGIAYGRPTENVHIRRVQLHAFSGSALAFGSDMSGGISNVLVEHAHLFNSNSGI 310
Query: 315 EFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDII 374
EFRTTKGRGGY+++IV+SD ++ N++ A A GNCGSHPDD FDP+ALP +D IT KD+I
Sbjct: 311 EFRTTKGRGGYMKEIVMSDIQMENVHTAIAATGNCGSHPDDKFDPNALPHLDHITLKDVI 370
Query: 375 GTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELEN 434
GTNITIAGN GI E+PF NICLSNI+LS N S +W CSN+ G S+SV PEPCPEL N
Sbjct: 371 GTNITIAGNLAGIDESPFTNICLSNITLSTNSVSPITWACSNVSGFSDSVLPEPCPELGN 430
Query: 435 SSSNSSSTCFSLIRYYGRASF 455
+S +SSS+CF L+ G+ +
Sbjct: 431 TSYDSSSSCFYLLSVSGKTAL 451
>gi|224107034|ref|XP_002314352.1| predicted protein [Populus trichocarpa]
gi|222863392|gb|EEF00523.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/423 (78%), Positives = 375/423 (88%), Gaps = 1/423 (0%)
Query: 16 AILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGG 75
AI I+ E S G CD +P L PRPHSVSI EFGAVGDGKTLNTLAFQNAIFYLKSF DKGG
Sbjct: 14 AIRIDAEESSGVCDFKPGLKPRPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGG 73
Query: 76 AQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRY 135
AQLYVP GKWLTGSF+LTSHLTLFLEKGAVILGSQ+PSHWD+VDPLPSYGRGIELPG+RY
Sbjct: 74 AQLYVPPGKWLTGSFSLTSHLTLFLEKGAVILGSQDPSHWDLVDPLPSYGRGIELPGKRY 133
Query: 136 KSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTF 195
+SLING ML DVVVTGDNGTIDGQGSVWWDWF S SLNYSRPHLVEF SS+ VVVSNLTF
Sbjct: 134 RSLINGDMLTDVVVTGDNGTIDGQGSVWWDWFESHSLNYSRPHLVEFTSSDLVVVSNLTF 193
Query: 196 LNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLK 255
LNAPAYNIHPVYCSNV +QNISV AP ESPYT+GIVPDSS+NVCIED +I +G+DAISLK
Sbjct: 194 LNAPAYNIHPVYCSNVLVQNISVSAPGESPYTIGIVPDSSNNVCIEDSLIKVGYDAISLK 253
Query: 256 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 315
SGWDEYGIAY RPT DVHIRRV LQSSSGSS+AFGSEMSGGISNV VE+++LY+S +GIE
Sbjct: 254 SGWDEYGIAYDRPTQDVHIRRVYLQSSSGSSIAFGSEMSGGISNVYVEQVYLYNSFSGIE 313
Query: 316 FRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 375
FRTTKGRGGYI++I+IS+ EL NIN+AFGA G+CGSHPDD FDP+A+P +DQIT +++ G
Sbjct: 314 FRTTKGRGGYIKRIIISNVELKNINMAFGAIGDCGSHPDDSFDPNAIPILDQITLQNVTG 373
Query: 376 TNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENS 435
+NIT+AGNFTG+ E+PF +ICL N+SL+I P + SW CSN+ G SE V PEPCPEL +S
Sbjct: 374 SNITMAGNFTGLAESPFTSICLFNVSLTI-PATSTSWTCSNVIGFSEFVSPEPCPELNSS 432
Query: 436 SSN 438
SN
Sbjct: 433 YSN 435
>gi|356558153|ref|XP_003547372.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 579
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/439 (74%), Positives = 381/439 (86%), Gaps = 2/439 (0%)
Query: 15 SAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKG 74
+A+ +NG + GQC P LDPRPHSVSI EFGAVGDGKTLNT+AFQNAIFYLKSFADKG
Sbjct: 140 NAVRVNG--NGGQCGSNPRLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKG 197
Query: 75 GAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRR 134
GAQLYVP GKWLTGSFNLTSHLTLFLEKGAVI+G+Q+PSHWDVV+PLPSYGRG+E+PG R
Sbjct: 198 GAQLYVPPGKWLTGSFNLTSHLTLFLEKGAVIIGTQDPSHWDVVEPLPSYGRGLEVPGGR 257
Query: 135 YKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLT 194
Y+SLINGYML DVVVTG+NGTIDG G VWWDW+S+ SLN+SRPHLVE ++S+ VVVSNLT
Sbjct: 258 YQSLINGYMLHDVVVTGNNGTIDGMGMVWWDWYSTHSLNHSRPHLVEIVASDYVVVSNLT 317
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
FLNAPAY+IHPVYCS+VHIQN+S+ PPESPYTVGIVPDSSDNVCIEDCI+AMG DAISL
Sbjct: 318 FLNAPAYSIHPVYCSHVHIQNVSISTPPESPYTVGIVPDSSDNVCIEDCIVAMGFDAISL 377
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
KSGWDEYGIAYGRPT +VHIRRV L + SGS++AFGS+MSGGISNV VE HL++S +GI
Sbjct: 378 KSGWDEYGIAYGRPTENVHIRRVHLHAFSGSALAFGSDMSGGISNVLVEHAHLFNSKSGI 437
Query: 315 EFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDII 374
EFRTTKGRGGY+++IV+SD ++ N++ A A GNCGSHPDD FDP+ALP +D IT KD+
Sbjct: 438 EFRTTKGRGGYMKEIVMSDIQMENVHTAIAATGNCGSHPDDKFDPNALPHLDHITLKDVT 497
Query: 375 GTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELEN 434
GTNI+IAGN GI+E+PF NICLSNI+LS N S +WECSN+ G S+SV PEPCPEL N
Sbjct: 498 GTNISIAGNIAGIEESPFTNICLSNITLSTNSVSPITWECSNVSGFSDSVLPEPCPELGN 557
Query: 435 SSSNSSSTCFSLIRYYGRA 453
S +SSS+CF L+ G+
Sbjct: 558 PSYDSSSSCFYLLSVSGKT 576
>gi|357478841|ref|XP_003609706.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
gi|355510761|gb|AES91903.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
Length = 459
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/436 (73%), Positives = 370/436 (84%), Gaps = 1/436 (0%)
Query: 17 ILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGA 76
+ +NGE D QC P+L PRPHSVSI EFGAVGDGKTLNT+AFQNAIFYLKSFADKGGA
Sbjct: 16 VRVNGERGDRQCGFNPSLKPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGA 75
Query: 77 QLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYK 136
QLYVP G WLT SFNLTSHLTLFLEKGAVI+GSQ+ +WDV+DPLPSYGRG+E+PG RY+
Sbjct: 76 QLYVPPGTWLTQSFNLTSHLTLFLEKGAVIIGSQDHYNWDVLDPLPSYGRGLEVPGGRYQ 135
Query: 137 SLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFL 196
SLINGYML+DVV+TG+NGTIDG GS WW+ FSS SLNYSRPHLVE ++S +VVVSNLTFL
Sbjct: 136 SLINGYMLQDVVITGNNGTIDGMGSTWWESFSSHSLNYSRPHLVELVASTDVVVSNLTFL 195
Query: 197 NAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKS 256
NAPAYNIHPVYC NVHI NIS+ APPESPYTVGIVPDSSD+VCIEDC IA G+DAI+LKS
Sbjct: 196 NAPAYNIHPVYCRNVHIHNISIFAPPESPYTVGIVPDSSDHVCIEDCTIATGYDAIALKS 255
Query: 257 GWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEF 316
GWDEYGIAYGRPT +VHIRRV LQ+S GS++AFGS+MSGGISNV VE +HLY+S GIEF
Sbjct: 256 GWDEYGIAYGRPTENVHIRRVHLQASYGSTLAFGSDMSGGISNVFVEHVHLYNSKGGIEF 315
Query: 317 RTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGT 376
RT +GRGGY++ I++SD E+ NI A A G CGSHPDD FDP+ALP +D F+DIIGT
Sbjct: 316 RTIRGRGGYMKDIILSDIEMKNIYRAISATGYCGSHPDDKFDPNALPLLDHFIFQDIIGT 375
Query: 377 NITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSS 436
NITIAG+F G+QE+PF NICLSNI+LS+N S SWECSN+ G S+SV P PCP+L+ S
Sbjct: 376 NITIAGSFAGLQESPFTNICLSNITLSVNYASSTSWECSNVSGFSDSVLPIPCPDLD-SP 434
Query: 437 SNSSSTCFSLIRYYGR 452
SN SS+C S + G+
Sbjct: 435 SNYSSSCLSKLSMKGK 450
>gi|356564613|ref|XP_003550546.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 460
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/440 (70%), Positives = 368/440 (83%), Gaps = 5/440 (1%)
Query: 17 ILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGA 76
+ +NG+ QC+ P L PRPH+VSI EFGAVGDGKTLNT+AFQNAIFYLKSFADKGGA
Sbjct: 26 VRVNGDSDGRQCEVNPALKPRPHTVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGA 85
Query: 77 QLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYK 136
QLYVP G WLT SFNLTSHLTLFLEKGAVILGSQ+P HW+VVDPLPSYGRG+E+PG RY+
Sbjct: 86 QLYVPPGTWLTQSFNLTSHLTLFLEKGAVILGSQDPFHWEVVDPLPSYGRGVEVPGGRYQ 145
Query: 137 SLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFL 196
SL+NGYML DVV+TG+NG IDG G WW+ FSS SLNYSRPHL+E ++S VVVSNLTFL
Sbjct: 146 SLVNGYMLHDVVITGNNGIIDGMGLGWWELFSSHSLNYSRPHLIELVASNRVVVSNLTFL 205
Query: 197 NAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKS 256
NAPAY+IHPVYCSNVHI N+S+ AP ESPYT+GIVPDSSD+VCIEDC+IA G+DAISLKS
Sbjct: 206 NAPAYSIHPVYCSNVHIHNVSISAPQESPYTIGIVPDSSDHVCIEDCVIATGYDAISLKS 265
Query: 257 GWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEF 316
GWDEYGIAYGRPT +VHIRRV LQ+ SGS++AFGS+MSGGISN+ VE +HLY+S +GIEF
Sbjct: 266 GWDEYGIAYGRPTENVHIRRVHLQAYSGSTIAFGSDMSGGISNILVENVHLYNSKSGIEF 325
Query: 317 RTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGT 376
RT +GRGGY+++I+ISD E+ NI A A G CGSHPDD FDP+ALP +D I +D+IGT
Sbjct: 326 RTMRGRGGYMKEIIISDIEMENIYTAMAATGYCGSHPDDKFDPNALPLLDHIILQDMIGT 385
Query: 377 NITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSS 436
NITIAG+F G+QE+PF NICLSN++LSIN S WECSN+ G S+SV P+PCP+LE
Sbjct: 386 NITIAGSFAGLQESPFTNICLSNVTLSINSVSSIPWECSNVSGFSDSVLPKPCPDLE--- 442
Query: 437 SNSSSTCFSLIRYYGRASFL 456
+ S C SL+ G+ + +
Sbjct: 443 --TLSDCLSLLSIKGKTAVM 460
>gi|356519942|ref|XP_003528627.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 449
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/440 (70%), Positives = 369/440 (83%), Gaps = 5/440 (1%)
Query: 17 ILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGA 76
+ +NG+ S QC+ P L PRPH+VSI EFGAVGDGKTLNT+AFQNAIFYLKSFADKGGA
Sbjct: 15 VRVNGDGSGRQCEINPALKPRPHTVSILEFGAVGDGKTLNTMAFQNAIFYLKSFADKGGA 74
Query: 77 QLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYK 136
QLYVP G WLT SFNLTSHLTLFLEKGAVILGSQ+P HW+VVDPLPSYGRG+E+PG RY+
Sbjct: 75 QLYVPPGTWLTQSFNLTSHLTLFLEKGAVILGSQDPFHWEVVDPLPSYGRGVEVPGGRYQ 134
Query: 137 SLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFL 196
SLING ML DVV+TG+NG IDG G WW+ FSS SLNYSRPHL+E ++S++VVVSNLTFL
Sbjct: 135 SLINGNMLHDVVITGNNGNIDGMGFAWWELFSSHSLNYSRPHLIELVASDHVVVSNLTFL 194
Query: 197 NAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKS 256
NAPAY+IHPVYCSNVHI N+S+ APPESP TVGIVPDSSD+VCIEDC+IA G+DAISLKS
Sbjct: 195 NAPAYSIHPVYCSNVHIHNVSISAPPESPNTVGIVPDSSDHVCIEDCVIATGYDAISLKS 254
Query: 257 GWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEF 316
GWDEYGIAYGRPT +VHIRRV LQ+SSGS++AFGS+MSGGISN+ VE +HLY+S +GIEF
Sbjct: 255 GWDEYGIAYGRPTENVHIRRVHLQASSGSTIAFGSDMSGGISNILVENVHLYNSKSGIEF 314
Query: 317 RTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGT 376
RT +GRGGY+++I+ISD E+ NI A A G CGSHPDD FDP+ALP +D I +D+IGT
Sbjct: 315 RTMRGRGGYMKEIIISDIEMENIYTAIAATGYCGSHPDDKFDPNALPLLDHIILQDMIGT 374
Query: 377 NITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSS 436
NITIAG+F G+QE+PF NICLSNI+LS N S WECSN+ G S+ V P+PCP+LE
Sbjct: 375 NITIAGSFAGLQESPFTNICLSNITLSTNSVSSIPWECSNVSGFSDYVLPKPCPDLE--- 431
Query: 437 SNSSSTCFSLIRYYGRASFL 456
+ S C SL+ G+ + +
Sbjct: 432 --TLSNCLSLLIIKGKTAVM 449
>gi|449531087|ref|XP_004172519.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Cucumis sativus]
Length = 452
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/452 (71%), Positives = 375/452 (82%)
Query: 5 VALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAI 64
VALLL L L +A I GE GQCD +PTLDPRPHSVSI EFGAVGDGKTLNT+AFQNAI
Sbjct: 1 VALLLFLQLSNAAKIIGEELVGQCDSKPTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAI 60
Query: 65 FYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSY 124
FYLKSFADKGGAQLYVP GKWLTGS NLTSHLTLFL KGAVILGSQ+PSHW++V+PLPSY
Sbjct: 61 FYLKSFADKGGAQLYVPPGKWLTGSINLTSHLTLFLXKGAVILGSQDPSHWELVNPLPSY 120
Query: 125 GRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFIS 184
GRGIE+PG+RY+SLINGY L+DVV+TGD+G IDGQG VWW+WFSS SLNYSRPHLVEF
Sbjct: 121 GRGIEVPGKRYRSLINGYNLQDVVITGDDGVIDGQGLVWWNWFSSHSLNYSRPHLVEFED 180
Query: 185 SENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCI 244
S+ VVVSNLTFLN PAYNIHPVYCSNV++ NISV AP ESPYTVGIVPDSSD+VCIE C
Sbjct: 181 SQYVVVSNLTFLNTPAYNIHPVYCSNVYVYNISVSAPSESPYTVGIVPDSSDHVCIEGCN 240
Query: 245 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 304
IA G+DAI+LKSGWD+YGIAYGRP+ ++HIRRV LQSSSGSS+AFGSEMSGGISNV VE
Sbjct: 241 IATGYDAIALKSGWDQYGIAYGRPSKNIHIRRVHLQSSSGSSIAFGSEMSGGISNVLVEH 300
Query: 305 IHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPA 364
+ L +S GI+ RTTKGRGGYI+ IV+SD E+ NI+ AF A G+ GSHPDD++DP+ALP
Sbjct: 301 VQLNNSFIGIQIRTTKGRGGYIKGIVVSDVEMENISTAFSASGHFGSHPDDEYDPNALPI 360
Query: 365 IDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESV 424
+ IT +++ GTNI IAGNF+GIQE+PF +I LSNI+ SIN S SW CS++ G SESV
Sbjct: 361 VQDITLQNVRGTNIKIAGNFSGIQESPFTSIYLSNITFSINSSSSTSWICSDVSGFSESV 420
Query: 425 FPEPCPELENSSSNSSSTCFSLIRYYGRASFL 456
P PC +L S SSS L+ G+ + L
Sbjct: 421 IPPPCSDLSTPYSISSSAASPLVNSTGKTAVL 452
>gi|449432886|ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 457
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/441 (72%), Positives = 368/441 (83%)
Query: 16 AILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGG 75
A I GE GQCD +PTLDPRPHSVSI EFGAVGDGKTLNT+AFQNAIFYLKSFADKGG
Sbjct: 17 AAKIIGEELVGQCDSKPTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGG 76
Query: 76 AQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRY 135
AQLYVP GKWLTGS NLTSHLTLFLEKGAVILGSQ+PSHW++V+PLPSYGRGIE+PG+RY
Sbjct: 77 AQLYVPPGKWLTGSINLTSHLTLFLEKGAVILGSQDPSHWELVNPLPSYGRGIEVPGKRY 136
Query: 136 KSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTF 195
+SLINGY L+DVV+TGD+G IDGQG VWW+WFSS SLNYSRPHLVEF S+ VVVSNLTF
Sbjct: 137 RSLINGYNLQDVVITGDDGVIDGQGLVWWNWFSSHSLNYSRPHLVEFEDSQYVVVSNLTF 196
Query: 196 LNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLK 255
LN PAYNIHPVYCSNV++ NISV AP ESPYTVGIVPDSSD+VCIE C IA G+DAI+LK
Sbjct: 197 LNTPAYNIHPVYCSNVYVYNISVSAPSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALK 256
Query: 256 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 315
SGWD+YGIAYGRP+ ++HIRRV LQSSSGSS+AFGSEMSGGISNV VE + L +S GI+
Sbjct: 257 SGWDQYGIAYGRPSKNIHIRRVHLQSSSGSSIAFGSEMSGGISNVLVEHVQLNNSFIGIQ 316
Query: 316 FRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 375
RTTKGRGGYI+ IV+SD E+ NI+ AF A G+ GSHPDD++DP+ALP + IT +++ G
Sbjct: 317 IRTTKGRGGYIKGIVVSDVEMENISTAFSASGHFGSHPDDEYDPNALPIVQDITLQNVRG 376
Query: 376 TNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENS 435
TNI IAGNF+GIQE+PF +I LSNI+ SIN S SW CS++ G SESV P PC +L
Sbjct: 377 TNIKIAGNFSGIQESPFTSIYLSNITFSINSSSSTSWICSDVSGFSESVIPPPCSDLSTP 436
Query: 436 SSNSSSTCFSLIRYYGRASFL 456
S SSS L+ G+ + L
Sbjct: 437 YSISSSAASPLVNSTGKTAVL 457
>gi|225437457|ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 542
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/431 (70%), Positives = 363/431 (84%)
Query: 16 AILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGG 75
A+ NG +DGQC + +L+PRPHSVSI EFGAVGDGKT NT+AF+NAIFYLKSFADKGG
Sbjct: 102 AVEHNGVGNDGQCKYKKSLEPRPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGG 161
Query: 76 AQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRY 135
AQLYVP G+WLTGSFNLTSHLTLFLE+GA ILGSQ+ +HW+++DPLPSYGRGIELPG RY
Sbjct: 162 AQLYVPPGRWLTGSFNLTSHLTLFLERGATILGSQDFTHWEILDPLPSYGRGIELPGGRY 221
Query: 136 KSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTF 195
+SLING L DVV+TG+NGTIDGQGSVWW+ FSS SLNYSRPH+VEFISS ++++SNLTF
Sbjct: 222 RSLINGPNLSDVVITGNNGTIDGQGSVWWENFSSHSLNYSRPHIVEFISSNDIIISNLTF 281
Query: 196 LNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLK 255
LN+PA+NIHPVYCSNV +QNI+ +APPESP T G+VPDSS+ +CIED I+MG+DAI LK
Sbjct: 282 LNSPAWNIHPVYCSNVWVQNITAYAPPESPRTSGVVPDSSEYICIEDSNISMGYDAIVLK 341
Query: 256 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 315
SGWDEYGIAYG+PT +VHIRRV LQSSSGS +AFGSEMSGGIS++ VE IHL DS GI+
Sbjct: 342 SGWDEYGIAYGKPTRNVHIRRVWLQSSSGSGLAFGSEMSGGISDILVEHIHLQDSSTGIK 401
Query: 316 FRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 375
+TTKGRGGYI+ I+ISD E+ N+ + GA G C SHPDD +DP ALP +D ITFKD++G
Sbjct: 402 LKTTKGRGGYIKGILISDVEMENVGLTIGATGQCRSHPDDKYDPGALPVVDGITFKDMVG 461
Query: 376 TNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENS 435
TN++IAGNF+GI E+PF +ICL NISLSI S W CSN+ GSSE V PEPCP L+
Sbjct: 462 TNVSIAGNFSGIYESPFTSICLFNISLSITSNSSKPWLCSNVFGSSECVSPEPCPNLQTK 521
Query: 436 SSNSSSTCFSL 446
+SNS STC S
Sbjct: 522 TSNSFSTCSSF 532
>gi|297743929|emb|CBI36899.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/431 (70%), Positives = 363/431 (84%)
Query: 16 AILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGG 75
A+ NG +DGQC + +L+PRPHSVSI EFGAVGDGKT NT+AF+NAIFYLKSFADKGG
Sbjct: 37 AVEHNGVGNDGQCKYKKSLEPRPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGG 96
Query: 76 AQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRY 135
AQLYVP G+WLTGSFNLTSHLTLFLE+GA ILGSQ+ +HW+++DPLPSYGRGIELPG RY
Sbjct: 97 AQLYVPPGRWLTGSFNLTSHLTLFLERGATILGSQDFTHWEILDPLPSYGRGIELPGGRY 156
Query: 136 KSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTF 195
+SLING L DVV+TG+NGTIDGQGSVWW+ FSS SLNYSRPH+VEFISS ++++SNLTF
Sbjct: 157 RSLINGPNLSDVVITGNNGTIDGQGSVWWENFSSHSLNYSRPHIVEFISSNDIIISNLTF 216
Query: 196 LNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLK 255
LN+PA+NIHPVYCSNV +QNI+ +APPESP T G+VPDSS+ +CIED I+MG+DAI LK
Sbjct: 217 LNSPAWNIHPVYCSNVWVQNITAYAPPESPRTSGVVPDSSEYICIEDSNISMGYDAIVLK 276
Query: 256 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 315
SGWDEYGIAYG+PT +VHIRRV LQSSSGS +AFGSEMSGGIS++ VE IHL DS GI+
Sbjct: 277 SGWDEYGIAYGKPTRNVHIRRVWLQSSSGSGLAFGSEMSGGISDILVEHIHLQDSSTGIK 336
Query: 316 FRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 375
+TTKGRGGYI+ I+ISD E+ N+ + GA G C SHPDD +DP ALP +D ITFKD++G
Sbjct: 337 LKTTKGRGGYIKGILISDVEMENVGLTIGATGQCRSHPDDKYDPGALPVVDGITFKDMVG 396
Query: 376 TNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENS 435
TN++IAGNF+GI E+PF +ICL NISLSI S W CSN+ GSSE V PEPCP L+
Sbjct: 397 TNVSIAGNFSGIYESPFTSICLFNISLSITSNSSKPWLCSNVFGSSECVSPEPCPNLQTK 456
Query: 436 SSNSSSTCFSL 446
+SNS STC S
Sbjct: 457 TSNSFSTCSSF 467
>gi|15228881|ref|NP_188308.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|14334802|gb|AAK59579.1| putative polygalacturonase [Arabidopsis thaliana]
gi|21280835|gb|AAM44924.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332642352|gb|AEE75873.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 455
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 285/445 (64%), Positives = 354/445 (79%), Gaps = 7/445 (1%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
MKMPVAL+ LLA + +LI+GE ++ C + LDPRPHSVSI EFGAVGDGKTLNT+AF
Sbjct: 1 MKMPVALVWLLAF-TILLISGEGNNAICKENFKLDPRPHSVSILEFGAVGDGKTLNTIAF 59
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
QNA+FYLKSFADKGGAQLYVP GKWLTGSFNLTSHLTLFLEKGA IL S +PSHWDVV P
Sbjct: 60 QNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEKGATILASPDPSHWDVVSP 119
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLV 180
LPSYGRGIELPG+RY+SLING L DVV+TG+NGT DGQG+ WW+W S SLNYSRPH++
Sbjct: 120 LPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTFDGQGAAWWEWLESGSLNYSRPHII 179
Query: 181 EFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCI 240
EF+SS+++++SNLTFLNAPA NIHPVYCS +HI+ + + +SP+ +G+ PDSSDNVCI
Sbjct: 180 EFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKVLIETSVDSPHVLGVAPDSSDNVCI 239
Query: 241 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 300
ED I +GHDA+SLKSGWD+YGI YGRPTT VHIR + L+S +G+ ++FGSEMSGG+S+V
Sbjct: 240 EDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEMSGGVSDV 299
Query: 301 QVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
VE+++++ SL G+ FRTT+GRGGYIR I ISD +L +++ A A G+ GSHPDD FD D
Sbjct: 300 TVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHPDDKFDRD 359
Query: 361 ALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGS 420
ALP + I ++ G +I +AGN TGI E+PF +ICL++I L S SW CSN+ G
Sbjct: 360 ALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTR--SEESWICSNVSGF 417
Query: 421 SESVFPEPCPELENSSSNSSSTCFS 445
S+ V PEPC EL +S S+CF+
Sbjct: 418 SDDVSPEPCQEL----MSSPSSCFA 438
>gi|21553827|gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana]
Length = 453
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 282/443 (63%), Positives = 351/443 (79%), Gaps = 7/443 (1%)
Query: 3 MPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQN 62
MPVAL+ LLA + +LI+GE ++ C + LDPRPHSVSI EFGAVGDGKTLNT+AFQN
Sbjct: 1 MPVALVWLLAF-TILLISGEGNNAICKENFKLDPRPHSVSILEFGAVGDGKTLNTIAFQN 59
Query: 63 AIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLP 122
A+FYLKSFADKGGAQLYVP GKWLTGSFNLTSHLTLFLEKGA IL S +PSHWDVV PLP
Sbjct: 60 AVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEKGATILASPDPSHWDVVSPLP 119
Query: 123 SYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEF 182
SYGRGIELPG+RY+SLING L DVV+TG+NGT DGQG+ WW+W S SLNYSRPH++EF
Sbjct: 120 SYGRGIELPGKRYRSLINGDNLIDVVITGENGTFDGQGAAWWEWLESGSLNYSRPHIIEF 179
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
+SS+++++SNLTFLNAPA NIHPVYCS +HI+ + + +SP+ +G+ PDSSDNVCIED
Sbjct: 180 VSSKHILISNLTFLNAPAINIHPVYCSQIHIRKVLIETSVDSPHVLGVAPDSSDNVCIED 239
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQV 302
I +GHDA+SLKSGWD+YGI YGRPTT VHIR + L+S +G+ ++FGSEMSGG+S+V V
Sbjct: 240 STINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEMSGGVSDVTV 299
Query: 303 EKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDAL 362
E+++++ SL G+ FRTT+GRGGYIR I ISD +L +++ A G+ GSHPDD FD DAL
Sbjct: 300 ERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVTNGHTGSHPDDKFDRDAL 359
Query: 363 PAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSE 422
P + I ++ G +I +AGN TGI E+PF +ICL++I L S SW CSN+ G S+
Sbjct: 360 PVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTR--SEESWICSNVSGFSD 417
Query: 423 SVFPEPCPELENSSSNSSSTCFS 445
V PEPC EL +S S+CF+
Sbjct: 418 DVSPEPCQEL----MSSPSSCFA 436
>gi|7939578|dbj|BAA95779.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 453
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 282/443 (63%), Positives = 351/443 (79%), Gaps = 7/443 (1%)
Query: 3 MPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQN 62
M VAL+ LLA + +LI+GE ++ C + LDPRPHSVSI EFGAVGDGKTLNT+AFQN
Sbjct: 1 MQVALVWLLAF-TILLISGEGNNAICKENFKLDPRPHSVSILEFGAVGDGKTLNTIAFQN 59
Query: 63 AIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLP 122
A+FYLKSFADKGGAQLYVP GKWLTGSFNLTSHLTLFLEKGA IL S +PSHWDVV PLP
Sbjct: 60 AVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEKGATILASPDPSHWDVVSPLP 119
Query: 123 SYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEF 182
SYGRGIELPG+RY+SLING L DVV+TG+NGT DGQG+ WW+W S SLNYSRPH++EF
Sbjct: 120 SYGRGIELPGKRYRSLINGDNLIDVVITGENGTFDGQGAAWWEWLESGSLNYSRPHIIEF 179
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
+SS+++++SNLTFLNAPA NIHPVYCS +HI+ + + +SP+ +G+ PDSSDNVCIED
Sbjct: 180 VSSKHILISNLTFLNAPAINIHPVYCSQIHIRKVLIETSVDSPHVLGVAPDSSDNVCIED 239
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQV 302
I +GHDA+SLKSGWD+YGI YGRPTT VHIR + L+S +G+ ++FGSEMSGG+S+V V
Sbjct: 240 STINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEMSGGVSDVTV 299
Query: 303 EKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDAL 362
E+++++ SL G+ FRTT+GRGGYIR I ISD +L +++ A A G+ GSHPDD FD DAL
Sbjct: 300 ERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHPDDKFDRDAL 359
Query: 363 PAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSE 422
P + I ++ G +I +AGN TGI E+PF +ICL++I L S SW CSN+ G S+
Sbjct: 360 PVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTR--SEESWICSNVSGFSD 417
Query: 423 SVFPEPCPELENSSSNSSSTCFS 445
V PEPC EL +S S+CF+
Sbjct: 418 DVSPEPCQEL----MSSPSSCFA 436
>gi|297833452|ref|XP_002884608.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330448|gb|EFH60867.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 290/435 (66%), Positives = 352/435 (80%), Gaps = 4/435 (0%)
Query: 3 MPVALLLLLALCSAILINGEV--SDGQCDD--QPTLDPRPHSVSITEFGAVGDGKTLNTL 58
M V ++L+LAL S I I +V + CD+ + +L RPHSVSIT+FGAVGDGKTLNTL
Sbjct: 1 MSVVIILILALTSLIPIYAKVLGAGKICDELGRISLSTRPHSVSITDFGAVGDGKTLNTL 60
Query: 59 AFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVV 118
AFQNA+FYL SFADKGGAQLYVP G WLTGSF+LTSHLTLFLE GAVI+ SQ+PSHW+VV
Sbjct: 61 AFQNAVFYLMSFADKGGAQLYVPPGNWLTGSFSLTSHLTLFLENGAVIVASQDPSHWEVV 120
Query: 119 DPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPH 178
DPLPSYGRG +LPG+RYKSLING ML DVVVTGDNGTIDGQG VWWD F+S SL Y+RPH
Sbjct: 121 DPLPSYGRGTDLPGKRYKSLINGNMLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPH 180
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
L+EF+SS+NV+VSNLTFLNAPAY IH +Y S+V+I I H+ PESPYT+GIVPDSS+ V
Sbjct: 181 LIEFLSSKNVIVSNLTFLNAPAYTIHSIYSSHVYIHKILAHSSPESPYTIGIVPDSSNYV 240
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
CI++ I +G+DAISLKSGWDEYGIAY RPT +VHIR V L+ +SGSS++FGSEMSGGIS
Sbjct: 241 CIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGIS 300
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD 358
+V V+ H+++SL GI FRTTKGRGGYI++I IS+ ++ I A A G+ GSHPDD +D
Sbjct: 301 DVVVDNAHMHNSLTGIAFRTTKGRGGYIKEIDISNIDMSRIGTAIVANGSFGSHPDDKYD 360
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIH 418
+ALP + I +I G NI IAG GI+E+PF+ + LSNI+LS + GS SW+CS ++
Sbjct: 361 ANALPLVSHIRLSNISGENIGIAGKLFGIKESPFSAVALSNIALSTSSGSSVSWQCSYVY 420
Query: 419 GSSESVFPEPCPELE 433
GSSESV PEPCPEL+
Sbjct: 421 GSSESVIPEPCPELK 435
>gi|356501888|ref|XP_003519755.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 455
Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust.
Identities = 286/445 (64%), Positives = 361/445 (81%), Gaps = 2/445 (0%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
MK V +LLL+ L +A+ NGE C ++ LDPRPHSVSI EFGAVGDGKTLNT+AF
Sbjct: 1 MKRLVTVLLLIILSTALEGNGEDDHEPCKEK-VLDPRPHSVSILEFGAVGDGKTLNTVAF 59
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
QNA+FY KSFADKGGA+LYVPSGKWLTGSFNLTSHLTLFLE+GA I+ SQ+ +HW +DP
Sbjct: 60 QNAVFYAKSFADKGGAKLYVPSGKWLTGSFNLTSHLTLFLERGATIIASQDYAHWTAMDP 119
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLV 180
LPSYGRGI++P RY+SLI G L DVV+TGDNG IDGQGSVWWD S+ SLNYSRPH++
Sbjct: 120 LPSYGRGIDVPVGRYRSLIYGQNLSDVVITGDNGIIDGQGSVWWDLISTHSLNYSRPHII 179
Query: 181 EFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCI 240
E + S+N+++SNLTFLN+PA++IHPVYCSN+ IQ I+V AP + PYT GIVPDSS++VCI
Sbjct: 180 ELVGSDNIIISNLTFLNSPAWSIHPVYCSNIQIQKITVQAPTKFPYTSGIVPDSSEHVCI 239
Query: 241 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 300
++C I+ GHDAI LKSGWDEYG+AYG+PT++VHIR V LQSSSG+ +AFGSEMSGGIS++
Sbjct: 240 DNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAFGSEMSGGISDI 299
Query: 301 QVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
E++H+ +S GIE +TT+GRGGY++ I ISDA+L NI + G+ GSHPDD +DP+
Sbjct: 300 IAEQLHITNSTFGIELKTTRGRGGYMKNIFISDAKLENIYLGISMTGSSGSHPDDKYDPN 359
Query: 361 ALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGS 420
A+P + +TF+++IG NI IAGNF+GI ++PF ICLSN++ S + S SW CSN+ G
Sbjct: 360 AVPDVGNVTFENVIGANIAIAGNFSGIVDSPFTPICLSNVTFSTSSESSPSWFCSNVMGI 419
Query: 421 SESVFPEPCPELENSSSNSSSTCFS 445
S+ VFPEPCP+L+N+ SN SS CFS
Sbjct: 420 SKEVFPEPCPDLQNTYSNFSS-CFS 443
>gi|297830296|ref|XP_002883030.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
gi|297328870|gb|EFH59289.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 283/449 (63%), Positives = 351/449 (78%), Gaps = 8/449 (1%)
Query: 3 MPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQN 62
M VAL+ LLA + +LI GE ++ C + LDPRPHSVSI EFGAVGDGKTLNTLAFQN
Sbjct: 1 MQVALVWLLAF-TILLIRGEGNNAICKEIFKLDPRPHSVSILEFGAVGDGKTLNTLAFQN 59
Query: 63 AIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLP 122
AIFYLKSFADKGGAQLYVP GKWLTGSFNLTSHLTLFLEKGA IL S +PSHWDVV PLP
Sbjct: 60 AIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEKGATILASPDPSHWDVVSPLP 119
Query: 123 SYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEF 182
SYGRGIELPG+RY+SLING L DVV+TG+NGT DGQG+ WW+W + SLNYSRPH++EF
Sbjct: 120 SYGRGIELPGKRYRSLINGDNLIDVVITGENGTFDGQGAAWWEWLETGSLNYSRPHIIEF 179
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
+SS+++++SNLTFLNAP+ NIHPVYCS +HI+ + + +SPY +G+ PDSSDNVCIED
Sbjct: 180 VSSKHILISNLTFLNAPSINIHPVYCSQIHIRKVLIETSVDSPYVLGVAPDSSDNVCIED 239
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQV 302
I +GHDA+SLKSGWD+YGI YGRPTT V+IR + L+S +G+ ++FGSEMSGGIS+V V
Sbjct: 240 STINVGHDAVSLKSGWDQYGIHYGRPTTAVYIRNLSLKSPTGAGISFGSEMSGGISDVTV 299
Query: 303 EKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDAL 362
E++++ S G+ FRTT+GRGGYIR I ISD +L +++ A A G+ GSHPDD FD DAL
Sbjct: 300 ERLNIQSSHVGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHPDDKFDWDAL 359
Query: 363 PAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSE 422
P + I ++ G +I +AGN TGI E+PF +ICL++I L + +SW CSN+ G S+
Sbjct: 360 PVVTHIVLRNFTGVDIGLAGNLTGIGESPFTSICLTDIHLHTHS---DSWICSNVSGFSD 416
Query: 423 SVFPEPCPELENSSSNSSSTCFSLIRYYG 451
V PEPC EL +S S+CF+ YG
Sbjct: 417 DVSPEPCQELM----SSPSSCFAGGSIYG 441
>gi|30679999|ref|NP_850525.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|20260262|gb|AAM13029.1| unknown protein [Arabidopsis thaliana]
gi|22136514|gb|AAM91335.1| unknown protein [Arabidopsis thaliana]
gi|332640935|gb|AEE74456.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 446
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 290/438 (66%), Positives = 352/438 (80%), Gaps = 4/438 (0%)
Query: 3 MPVALLLLLALCSAILINGEVSDGQ--CDD--QPTLDPRPHSVSITEFGAVGDGKTLNTL 58
M V +L+LAL S I I V CD+ + +L RPHSVSIT+FGAVGDGKTLNTL
Sbjct: 1 MSVVTILILALTSVIPIYANVHGAGKICDELGRRSLSTRPHSVSITDFGAVGDGKTLNTL 60
Query: 59 AFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVV 118
AFQNA+FYL SFADKGGAQLYVP G WLTGSF+LTSHLTLFLE GAVI+ SQ+PSHW+VV
Sbjct: 61 AFQNAVFYLMSFADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENGAVIVASQDPSHWEVV 120
Query: 119 DPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPH 178
DPLPSYGRGI+LPG+RYKSLING L DVVVTGDNGTIDGQG VWWD F+S SL Y+RPH
Sbjct: 121 DPLPSYGRGIDLPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPH 180
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
L+EF+SSENV+VSNLTFLNAPAY+I+ +Y S+V+I I H+ P+SPYT+GIVPDSSD V
Sbjct: 181 LIEFLSSENVIVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYV 240
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
CI++ I +G+DAISLKSGWDEYGIAY RPT +VHIR V L+ +SGSS++FGSEMSGGIS
Sbjct: 241 CIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGIS 300
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD 358
+V V+ H++ SL GI FRTTKGRGGYI++I IS+ ++ I A A G+ GSHPDD +D
Sbjct: 301 DVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYD 360
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIH 418
+ALP + I +I G NI IAG GI+E+PF+++ LSN+SLS++ GS SW+CS ++
Sbjct: 361 VNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSWQCSYVY 420
Query: 419 GSSESVFPEPCPELENSS 436
GSSESV PEPCPEL+ +
Sbjct: 421 GSSESVIPEPCPELKRDA 438
>gi|79330402|ref|NP_001032043.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|110739511|dbj|BAF01664.1| hypothetical protein [Arabidopsis thaliana]
gi|332008402|gb|AED95785.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 447
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 297/458 (64%), Positives = 351/458 (76%), Gaps = 15/458 (3%)
Query: 3 MPVALLLLLALCSAILINGEV--SDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
MPVAL+LLL L S ILING CD RPHSV IT+FGAVGDGKTLNTLAF
Sbjct: 1 MPVALVLLLTLSSVILINGRSYGVGNICDRGRRPSERPHSVKITDFGAVGDGKTLNTLAF 60
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
QNA+FYLKSFADKGGAQLYVP G+WLTGSFNLTSHLTLFLEK AVIL SQ+PSHW V D
Sbjct: 61 QNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHLTLFLEKDAVILASQDPSHWQVTDA 120
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLV 180
LPSYGRGI+LPG+RY SLING ML DVVVTGDNGTIDGQG VWWD F+S SL YSRPHLV
Sbjct: 121 LPSYGRGIDLPGKRYMSLINGDMLHDVVVTGDNGTIDGQGLVWWDRFNSHSLEYSRPHLV 180
Query: 181 EFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCI 240
EF+S+ENV+VSNLTFLNAPAY IH VYC N++I ++ + PESPYT+GIVPDSS+NVCI
Sbjct: 181 EFVSAENVIVSNLTFLNAPAYTIHSVYCRNLYIHRVTANTCPESPYTIGIVPDSSENVCI 240
Query: 241 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 300
++ I MG+DAISLKSG DEYG++Y RPT +V IR V L+++SGSS++FGSEMSGGIS+V
Sbjct: 241 QESSINMGYDAISLKSGCDEYGLSYARPTANVQIRNVYLRAASGSSISFGSEMSGGISDV 300
Query: 301 QVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
+V H+++SL+GI FRTT GRGGYI++I IS+ + N+ AF A G+ G+HPD FD +
Sbjct: 301 EVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHMVNVGTAFLANGSFGTHPDSGFDEN 360
Query: 361 ALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGS--YNSWECSNIH 418
A P + I DI+G NI+ AG F G +E+PF +I LSNISLSI + +SW+CS +
Sbjct: 361 AYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSILLSNISLSIKNSASPADSWQCSYVD 420
Query: 419 GSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRASFL 456
GSSE V PEPC EL+ S YYGRA L
Sbjct: 421 GSSEFVVPEPCLELK-----------SFDSYYGRAEAL 447
>gi|356570982|ref|XP_003553661.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 527
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 284/441 (64%), Positives = 349/441 (79%), Gaps = 5/441 (1%)
Query: 5 VALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAI 64
VA+LLL+A+ +A+ NGE + G C Q L RPHSVSI EFGAVGDG TLNT+AF+NAI
Sbjct: 72 VAVLLLVAISTAVESNGEDNGGPCK-QNALKARPHSVSILEFGAVGDGITLNTVAFENAI 130
Query: 65 FYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSY 124
FYLKSFADKGGAQLYVPSG WLTGSFNLT+HLTLFLE+GA I+ SQ+ SHWD+VD LPSY
Sbjct: 131 FYLKSFADKGGAQLYVPSGTWLTGSFNLTNHLTLFLERGATIIASQDYSHWDIVDFLPSY 190
Query: 125 GRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFIS 184
GRGI RY+SLI G L DVV+TGDNGTIDGQGS+WW F+S SLNY+RP+L+EF+
Sbjct: 191 GRGI----GRYRSLIYGQNLSDVVITGDNGTIDGQGSIWWKLFNSNSLNYTRPNLIEFVD 246
Query: 185 SENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCI 244
S +V++SNLTFL++PA+ IHPVYCSNV IQNI+ AP E PYT GIVPDSS NVCIE+
Sbjct: 247 SVDVIISNLTFLDSPAWGIHPVYCSNVQIQNITYRAPAEFPYTSGIVPDSSQNVCIENSN 306
Query: 245 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 304
I+ GHDAI LKSGWD+YGIAYG+PT++VHI V LQSSSG+ +AFGSEMSGGIS + EK
Sbjct: 307 ISTGHDAIVLKSGWDQYGIAYGKPTSNVHISNVYLQSSSGAGLAFGSEMSGGISVIIAEK 366
Query: 305 IHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPA 364
+H+ +S GIE +TT+GRGGY+R I ISDAEL NI++ G G HPDD +D +LP
Sbjct: 367 LHILNSPIGIELKTTRGRGGYMRGIFISDAELENISLGISMTGYSGFHPDDKYDTSSLPV 426
Query: 365 IDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESV 424
+ ITFK++IG NI++AGNF+GI E+PF+ ICLSN++ S++ SW CSN+ G SE V
Sbjct: 427 VGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTFSLSSEPSPSWFCSNVIGFSEHV 486
Query: 425 FPEPCPELENSSSNSSSTCFS 445
PEPCP++++S S +CFS
Sbjct: 487 IPEPCPDIQSSYSKFPFSCFS 507
>gi|356534963|ref|XP_003536020.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 456
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 286/446 (64%), Positives = 355/446 (79%), Gaps = 3/446 (0%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
MK V +LL++ L +A+ NGE +C Q +DPRPHSVSI EFGAVGDGKTLNT+AF
Sbjct: 1 MKSLVTVLLVIVLSTALESNGEDDHERCK-QEAVDPRPHSVSILEFGAVGDGKTLNTVAF 59
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
QNA+FY KSFADKGGA+LYVPSGKWLTGSFNLTSHLTLFLE+GA I+ SQ+ +HW +DP
Sbjct: 60 QNAVFYAKSFADKGGAKLYVPSGKWLTGSFNLTSHLTLFLERGATIIASQDYAHWTAMDP 119
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLV 180
LPSYGRGI++P RY+SLI G L DVV+TGDN IDGQGSVWWD + SLNYSRPH++
Sbjct: 120 LPSYGRGIDVPSGRYRSLIYGQNLSDVVITGDNAIIDGQGSVWWDLIGTHSLNYSRPHII 179
Query: 181 EFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCI 240
E + S+N+ +SNLTFLN+PA++IHPVYCSNV IQ I+VHAP E PYT GIVPDSS++VCI
Sbjct: 180 ELVGSDNITISNLTFLNSPAWSIHPVYCSNVQIQKITVHAPTEFPYTSGIVPDSSEHVCI 239
Query: 241 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 300
+ I+ GHDAI LKSGWD+YG+AYG+PT+ VHIR V LQSSSG+ +AFGSEMSGGIS++
Sbjct: 240 YNSNISTGHDAIVLKSGWDQYGVAYGKPTSKVHIRGVYLQSSSGAGLAFGSEMSGGISDI 299
Query: 301 QVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
E++H+ +S GIE +TTKGRGGY++ I ISDA+L NI + G+ GSHPDD +DP+
Sbjct: 300 IAEQLHITNSTIGIELKTTKGRGGYMKNIFISDAKLENIYLGISMTGSSGSHPDDKYDPN 359
Query: 361 ALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-SINPGSYNSWECSNIHG 419
A+P + +TF+++IGTNI IAGNF+GI ++PF ICL N + S + S SW CS+I G
Sbjct: 360 AVPDVGNVTFENVIGTNIAIAGNFSGIVDSPFTPICLLNATFSSSSESSSPSWFCSDIMG 419
Query: 420 SSESVFPEPCPELENSSSNSSSTCFS 445
SE VFPEPCP+L+N+ SN SS CFS
Sbjct: 420 ISEEVFPEPCPDLQNTYSNFSS-CFS 444
>gi|356503915|ref|XP_003520745.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 497
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 282/433 (65%), Positives = 345/433 (79%), Gaps = 5/433 (1%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
MK VA+LLL+A+ +A+ NGE + G C Q RPHSVSI EFGAVGDG TLNT+AF
Sbjct: 23 MKSLVAVLLLVAISTAVESNGEDNGGPCK-QNAFKARPHSVSILEFGAVGDGITLNTVAF 81
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+NA+FYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE+GA+I+ SQ+ SHWD+VD
Sbjct: 82 ENAMFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLERGAIIIASQDYSHWDIVDF 141
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLV 180
LPSYGRGI RY+SLI G L DVV+TGDNGTIDGQGS+WW+ FSS SLNYSRP+L+
Sbjct: 142 LPSYGRGI----GRYRSLIYGQNLSDVVITGDNGTIDGQGSIWWELFSSNSLNYSRPNLI 197
Query: 181 EFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCI 240
EF+ S ++++SNLTFL++PA+ IHPV+CSNV IQNI+ AP E PYT GIVPDSS VCI
Sbjct: 198 EFVDSVDIIISNLTFLDSPAWGIHPVHCSNVQIQNITSRAPAEFPYTSGIVPDSSRYVCI 257
Query: 241 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 300
E+ I+ GHDA+ LKSGWD+YGIAYG+PT+ VHI V LQSSSG+ +AFGSEMSGGIS++
Sbjct: 258 ENSNISTGHDAVVLKSGWDQYGIAYGKPTSSVHISNVYLQSSSGAGLAFGSEMSGGISDI 317
Query: 301 QVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
EK+H+ +S GIE +TTKGRGGY+R I ISDAEL NI++ G G HPDD +D
Sbjct: 318 IAEKLHILNSPIGIELKTTKGRGGYMRGIFISDAELENISLGISMTGYSGFHPDDKYDTS 377
Query: 361 ALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGS 420
ALP + ITFK++IG NI++AGNF+GI E+PF+ ICLSN++ S++ SW CSN+ G
Sbjct: 378 ALPIVGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTFSLSSEPSPSWFCSNVIGF 437
Query: 421 SESVFPEPCPELE 433
SE V PEPCP+L+
Sbjct: 438 SEDVIPEPCPDLQ 450
>gi|297792177|ref|XP_002863973.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297309808|gb|EFH40232.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 447
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 297/460 (64%), Positives = 351/460 (76%), Gaps = 19/460 (4%)
Query: 3 MPVALLLLLALCSAILINGEV--SDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
MPVAL+LLL L S ILING CD + RPHSV IT+FGAVGDG+TLNTLAF
Sbjct: 1 MPVALVLLLTLSSVILINGRSYGVGNVCDLGRRPNERPHSVKITDFGAVGDGETLNTLAF 60
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
QNA+FYLKSFADKGGAQLYVP G+WLTGSFNLTSHLTLFLEK AVIL SQ+PSHW V D
Sbjct: 61 QNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHLTLFLEKDAVILASQDPSHWQVADA 120
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLV 180
LPSYGRGI+LPG+RY SLING L DVVVTGDNGTIDGQG VWWD F+S SL YSRPHLV
Sbjct: 121 LPSYGRGIDLPGKRYMSLINGDTLHDVVVTGDNGTIDGQGLVWWDRFNSHSLEYSRPHLV 180
Query: 181 EFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCI 240
EF+SS NV+VSNLTFLNAPAY IH VYCSN++I ++ + PESPYT+GIVPDSS+NVCI
Sbjct: 181 EFVSSGNVIVSNLTFLNAPAYTIHSVYCSNLYIHRVTANTSPESPYTIGIVPDSSENVCI 240
Query: 241 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 300
+D I MG+DAISLKSGWDEYGI+Y RPT +V I+ V L ++SGSS++FGSEMSGGIS+V
Sbjct: 241 QDSSINMGYDAISLKSGWDEYGISYARPTANVQIKNVYLGAASGSSISFGSEMSGGISDV 300
Query: 301 QVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
+V H+++SL+GI FRTT GRGGYI++I IS+ + N+ AF A G+ G+HPD FD +
Sbjct: 301 EVRDAHIHNSLSGISFRTTNGRGGYIKEIDISNIHMVNVGTAFLANGSFGTHPDSGFDAN 360
Query: 361 ALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSI----NPGSYNSWECSN 416
A P + I DI G NI+ AG F G +E+PF +I LSNISLSI +P + W+CS
Sbjct: 361 AFPLVSHIRLHDIAGENISTAGYFFGTEESPFTSILLSNISLSIKNSDSPADF--WQCSY 418
Query: 417 IHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRASFL 456
+ GSSE V PEPC EL++ S+ YGRA L
Sbjct: 419 VDGSSEFVVPEPCLELKSFDSS-----------YGRAEAL 447
>gi|22327662|ref|NP_680409.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20258821|gb|AAM14020.1| unknown protein [Arabidopsis thaliana]
gi|22136814|gb|AAM91751.1| unknown protein [Arabidopsis thaliana]
gi|332008401|gb|AED95784.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 287/444 (64%), Positives = 340/444 (76%), Gaps = 15/444 (3%)
Query: 17 ILINGEV--SDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKG 74
ILING CD RPHSV IT+FGAVGDGKTLNTLAFQNA+FYLKSFADKG
Sbjct: 17 ILINGRSYGVGNICDRGRRPSERPHSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKG 76
Query: 75 GAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRR 134
GAQLYVP G+WLTGSFNLTSHLTLFLEK AVIL SQ+PSHW V D LPSYGRGI+LPG+R
Sbjct: 77 GAQLYVPPGRWLTGSFNLTSHLTLFLEKDAVILASQDPSHWQVTDALPSYGRGIDLPGKR 136
Query: 135 YKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLT 194
Y SLING ML DVVVTGDNGTIDGQG VWWD F+S SL YSRPHLVEF+S+ENV+VSNLT
Sbjct: 137 YMSLINGDMLHDVVVTGDNGTIDGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNLT 196
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
FLNAPAY IH VYC N++I ++ + PESPYT+GIVPDSS+NVCI++ I MG+DAISL
Sbjct: 197 FLNAPAYTIHSVYCRNLYIHRVTANTCPESPYTIGIVPDSSENVCIQESSINMGYDAISL 256
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
KSG DEYG++Y RPT +V IR V L+++SGSS++FGSEMSGGIS+V+V H+++SL+GI
Sbjct: 257 KSGCDEYGLSYARPTANVQIRNVYLRAASGSSISFGSEMSGGISDVEVSDAHIHNSLSGI 316
Query: 315 EFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDII 374
FRTT GRGGYI++I IS+ + N+ AF A G+ G+HPD FD +A P + I DI+
Sbjct: 317 AFRTTNGRGGYIKEIDISNIHMVNVGTAFLANGSFGTHPDSGFDENAYPLVSHIRLHDIV 376
Query: 375 GTNITIAGNFTGIQEAPFANICLSNISLSINPGS--YNSWECSNIHGSSESVFPEPCPEL 432
G NI+ AG F G +E+PF +I LSNISLSI + +SW+CS + GSSE V PEPC EL
Sbjct: 377 GENISTAGYFFGTKESPFTSILLSNISLSIKNSASPADSWQCSYVDGSSEFVVPEPCLEL 436
Query: 433 ENSSSNSSSTCFSLIRYYGRASFL 456
+ S YYGRA L
Sbjct: 437 K-----------SFDSYYGRAEAL 449
>gi|218186147|gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indica Group]
Length = 449
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/418 (63%), Positives = 338/418 (80%), Gaps = 2/418 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RPHSV+ITEFGAVGDGKTLNTL FQNA+FY +SFADKGGAQLYVP G+WLTGSFNLTSHL
Sbjct: 31 RPHSVTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHL 90
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFLE+ AVI+G+++PS W +V+PLPSYG+G++LPG R++SLINGY L DVV+TG+NG I
Sbjct: 91 TLFLEEEAVIIGTKDPSQWPIVEPLPSYGQGLDLPGPRHRSLINGYNLSDVVITGNNGVI 150
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQGSVWWDW S LN+SRPH+VEF+ SE VV+SNLTFLN+PA++IHPVYCSNV + N+
Sbjct: 151 DGQGSVWWDWLHSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVKVHNV 210
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ ++P T GIVPDS NVCIED I++GHDAISLKSGWD YGI++GRPT+D+HI R
Sbjct: 211 TIKTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISR 270
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V LQ+SSG+++A GSEMSGGIS++ V+ I + S GI FRTT GRGGYI ++V++D +
Sbjct: 271 VDLQASSGAALAIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVM 330
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
++++A GN SHPDD FDP LP IDQIT K++ GTNI++AG +GI+ PF+ IC
Sbjct: 331 DSVHLAIEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAIC 390
Query: 397 LSNISLSI-NPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRA 453
LSN++ SI + ++W CSN+HG SE VFP+PC EL ++S+N SS CFSL Y A
Sbjct: 391 LSNLNFSIADSAPSSAWTCSNVHGYSELVFPKPCSELHDTSTN-SSICFSLSSYSALA 447
>gi|115486511|ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|77552386|gb|ABA95183.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113645621|dbj|BAF28762.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|222616379|gb|EEE52511.1| hypothetical protein OsJ_34717 [Oryza sativa Japonica Group]
Length = 449
Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/418 (63%), Positives = 338/418 (80%), Gaps = 2/418 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RPHSV+ITEFGAVGDGKTLNTL FQNA+FY +SFADKGGAQLYVP G+WLTGSFNLTSHL
Sbjct: 31 RPHSVTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHL 90
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFLE+ AVI+G+++PS W +V+PLPSYG+G++LPG R++SLINGY L DVV+TG+NG I
Sbjct: 91 TLFLEEEAVIIGTKDPSQWPIVEPLPSYGQGLDLPGPRHRSLINGYNLSDVVITGNNGVI 150
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQGSVWWDW S LN+SRPH+VEF+ SE VV+SNLTFLN+PA++IHPVYCSNV + N+
Sbjct: 151 DGQGSVWWDWLHSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVKVHNV 210
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ ++P T GIVPDS NVCIED I++GHDAISLKSGWD YGI++GRPT+D+HI R
Sbjct: 211 TIKTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISR 270
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V LQ+SSG+++A GSEMSGGIS++ V+ I + S GI FRTT GRGGYI ++V++D +
Sbjct: 271 VDLQASSGAALAIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVM 330
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
++++A GN SHPDD FDP LP IDQIT K++ GTNI++AG +GI+ PF+ IC
Sbjct: 331 DSVHLAIEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAIC 390
Query: 397 LSNISLSI-NPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRA 453
LSN++ SI + ++W CSN+HG SE VFP+PC EL ++S+N SS CFSL Y A
Sbjct: 391 LSNLNFSIADLAPSSAWTCSNVHGYSELVFPKPCSELHDTSTN-SSICFSLSSYSALA 447
>gi|212274809|ref|NP_001130359.1| uncharacterized protein LOC100191454 precursor [Zea mays]
gi|194688932|gb|ACF78550.1| unknown [Zea mays]
gi|413920257|gb|AFW60189.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 458
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 259/422 (61%), Positives = 339/422 (80%), Gaps = 2/422 (0%)
Query: 29 DDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTG 88
D Q PRPHSV+ITEFGAVGDG+TLNT+ FQNA+FY++SFADKGGAQLYVP G+WLTG
Sbjct: 32 DHQAPPGPRPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTG 91
Query: 89 SFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVV 148
SFNLTSHLTL+LE+GAVI+G+++ S W +V+PLPSYG+G++LPG R++SLI+GY L DVV
Sbjct: 92 SFNLTSHLTLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVV 151
Query: 149 VTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
+TG+NG IDGQG VWW W S LN+SRP+L+EF+ SE++V+SNLTFLN+PA++IHPVYC
Sbjct: 152 ITGNNGVIDGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYC 211
Query: 209 SNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRP 268
SNV + N+++ ++P T GIVPDS N+CIED I++ H+AISLKSGWD YGI++GRP
Sbjct: 212 SNVKVHNVTIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRP 271
Query: 269 TTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQ 328
T+D+ I RV L SSSG+++AFGSEMSGGIS++ V + ++DS GI F+T+ GRGGYI
Sbjct: 272 TSDIRISRVDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIED 331
Query: 329 IVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQ 388
+VIS+ ++ N++V GNC +HPDD FDP LPAID +T K++ GTNI++AG +GI+
Sbjct: 332 VVISEVQMENVHVGIEFTGNCSTHPDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIE 391
Query: 389 EAPFANICLSNISLSINPGS-YNSWECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLI 447
APF ICLSN++ S+ GS +SW CS++ G SE+VFPEPC EL + SS SSS C+SL
Sbjct: 392 GAPFTAICLSNLNFSMAAGSGPSSWSCSDVSGYSEAVFPEPCTELRDPSS-SSSVCYSLA 450
Query: 448 RY 449
Y
Sbjct: 451 SY 452
>gi|357151266|ref|XP_003575734.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 457
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 270/456 (59%), Positives = 347/456 (76%), Gaps = 4/456 (0%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDG--QCDDQPTLDPRPHSVSITEFGAVGDGKTLNTL 58
M+ V + + LAL A+++ S G Q +Q RPHSV+ITEFGAVG+G+TLNTL
Sbjct: 1 MRFLVLVDVFLALTLAVVLGSAHSGGGRQWREQAPPGSRPHSVTITEFGAVGNGRTLNTL 60
Query: 59 AFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVV 118
FQNA+FY +SFADKGGAQLYVP G+WLTGSFNLTSHLTLFLE+GAVI+G++ S W +V
Sbjct: 61 PFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHLTLFLEEGAVIIGAKESSQWPIV 120
Query: 119 DPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPH 178
+PLPSYG+G++LPG R+ SLINGY + DVV+TG+NG I+GQGS+WWDW S LN+SRPH
Sbjct: 121 EPLPSYGQGLDLPGPRHLSLINGYNVTDVVITGNNGVINGQGSIWWDWLHSHELNHSRPH 180
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
LVEF+ SE +V+SNLTFLN+PA++IHPVYCS V + N+++ ++P T GIVPDSS NV
Sbjct: 181 LVEFLHSEEIVISNLTFLNSPAWSIHPVYCSKVKVHNVTIKTSSDAPLTDGIVPDSSSNV 240
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
IED I++ HDAIS+KSGWD+YGI+ G+P +D+HI R+ LQ+SSG+++AFGSEMSGGIS
Sbjct: 241 VIEDSTISVSHDAISIKSGWDKYGISIGKPASDIHISRMDLQASSGAALAFGSEMSGGIS 300
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD 358
++ + I ++ S GI F+TT GRGGYI ++VISD ++ ++ VA GN SHPD+DFD
Sbjct: 301 DIHADNIQIHGSNKGISFKTTPGRGGYIDEVVISDVKMDDVIVAIEFTGNWSSHPDEDFD 360
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS-LSINPGSYNSWECSNI 417
P LP I QIT KD++GTNI++AG +GI PF ICLSN++ L +SW CSN+
Sbjct: 361 PSQLPVIGQITLKDMVGTNISVAGVLSGIDGDPFTAICLSNVNFLMAESAHSSSWSCSNV 420
Query: 418 HGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRA 453
G SESVFPEPC EL SSN SS CFSL+ Y A
Sbjct: 421 SGYSESVFPEPCSELHTPSSN-SSMCFSLVSYSALA 455
>gi|242071887|ref|XP_002451220.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
gi|241937063|gb|EES10208.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
Length = 448
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/430 (60%), Positives = 341/430 (79%), Gaps = 2/430 (0%)
Query: 26 GQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW 85
G+ DQ RPHSV+ITEFGAVGDG+TLNT+ FQNA+FY++SFADKGGAQLYVP G+W
Sbjct: 19 GELRDQAPPGSRPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRW 78
Query: 86 LTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLR 145
LTGSFNLTSHLT++LE+GAVI+G+++ S W +V+PLPSYG+G +LPG R++SLINGY L
Sbjct: 79 LTGSFNLTSHLTIYLEQGAVIVGAKDSSQWPIVEPLPSYGQGTDLPGPRHRSLINGYNLT 138
Query: 146 DVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHP 205
DVV+TG+NG IDGQG VWW W S LN+SRPHL+EF+ SE++V+SNLTFLN+PA++IHP
Sbjct: 139 DVVITGNNGVIDGQGLVWWQWLLSHELNHSRPHLLEFLYSEDIVISNLTFLNSPAWSIHP 198
Query: 206 VYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAY 265
VYCSNV + N+++ ++P T GIVPDS N+CIED I++ H+AISLKSGWD+YGI++
Sbjct: 199 VYCSNVKVHNVTIETSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDKYGISF 258
Query: 266 GRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGY 325
GRPT+D+HI RV L SSSG+++AFGSEMSGGIS++ V + ++DS GI F+T+ GRGGY
Sbjct: 259 GRPTSDIHISRVDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSYKGISFKTSPGRGGY 318
Query: 326 IRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFT 385
I +++IS+ ++ N++V GNC +HPDD FD LP IDQ+T K+++GTNI++AG +
Sbjct: 319 IEEVIISEVQMENVHVGIEFTGNCSTHPDDSFDLSDLPTIDQVTMKNMVGTNISVAGVLS 378
Query: 386 GIQEAPFANICLSNISLSINPGS-YNSWECSNIHGSSESVFPEPCPELENSSSNSSSTCF 444
GI APF ICLSN++ S+ + +SW CSN+ G SE+VFPEPC EL + SS S S CF
Sbjct: 379 GIDNAPFTAICLSNLNFSMAADTGSSSWSCSNVSGYSEAVFPEPCTELRDPSS-SPSICF 437
Query: 445 SLIRYYGRAS 454
SL Y A+
Sbjct: 438 SLSSYSAIAA 447
>gi|413916538|gb|AFW56470.1| polygalacturonase [Zea mays]
Length = 458
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/454 (57%), Positives = 346/454 (76%), Gaps = 11/454 (2%)
Query: 5 VALLLLLALCSAILINGEV---SDGQCDDQPTLDPRP-HSVSITEFGAVGDGKTLNTLAF 60
+A L+ LA A+L+ G ++ QC + P HSV+ITEFGAVGDG TLNT++F
Sbjct: 1 MARLVALASMVAVLVLGLACAEAEPQCTRRRPPAPPRPHSVTITEFGAVGDGVTLNTVSF 60
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
QNA+FYL+SFADKGGAQLY+P G+WLTGSFNLTSHLTLFLE GAVI+G+Q+ S W VV+P
Sbjct: 61 QNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTLFLESGAVIVGTQDVSQWPVVEP 120
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLV 180
LPSYGRG++LPG R++SLING L DVV+TG+NGTIDGQGS WW+WF S LNYSRPHLV
Sbjct: 121 LPSYGRGMDLPGSRHRSLINGQNLVDVVITGNNGTIDGQGSTWWNWFRSNKLNYSRPHLV 180
Query: 181 EFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCI 240
EF+ SE +V+SN+TFLN+PA++IHPVYCSNV + ++++ ++P GIVPDS N+CI
Sbjct: 181 EFVDSEQIVISNITFLNSPAWSIHPVYCSNVVVHSVTIQTSLDAPLNHGIVPDSCSNMCI 240
Query: 241 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 300
ED I++ HDAISLKSGWD+ GIA+GRPT+D+HI R+ LQSS G+++AFGSEMSGGIS++
Sbjct: 241 EDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQSSLGAALAFGSEMSGGISDI 300
Query: 301 QVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
+++ ++ S G+ F+T GRGGYIR VISD ++ +++VA G+ SHPDD FDP
Sbjct: 301 HADRLLIHSSSRGVFFKTAPGRGGYIRDTVISDVQMEDVDVAIAFTGDWPSHPDDQFDPA 360
Query: 361 ALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSI----NPGSYNSWECSN 416
ALP + IT K++ GT I++AG +GI PF +ICLSNI+ S+ +P S+ W CSN
Sbjct: 361 ALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSNINFSLADSASPTSH--WSCSN 418
Query: 417 IHGSSESVFPEPCPELENSSSNSSSTCFSLIRYY 450
+ G SE VFPEPC +L+ SS+ +S C +L ++
Sbjct: 419 VSGYSELVFPEPCLDLQTQSSD-ASVCSTLPSFH 451
>gi|226507254|ref|NP_001148987.1| polygalacturonase precursor [Zea mays]
gi|195623798|gb|ACG33729.1| polygalacturonase [Zea mays]
Length = 458
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/454 (57%), Positives = 345/454 (75%), Gaps = 11/454 (2%)
Query: 5 VALLLLLALCSAILINGEV---SDGQCDDQPTLDPRP-HSVSITEFGAVGDGKTLNTLAF 60
+A L+ LA A+L+ G ++ QC + P HSV+ITEFGAVGDG TLNT++F
Sbjct: 1 MARLVALASAVAVLVLGLACAEAEPQCTRRRPPAPPRPHSVTITEFGAVGDGVTLNTVSF 60
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
QNA+FYL+SFADKGGAQLY+P G+WLTGSFNLTSHLTLFLE GAVI+G+Q+ S W VV+P
Sbjct: 61 QNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTLFLESGAVIVGTQDVSQWPVVEP 120
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLV 180
LPSYGRG++LPG R++SLING L DVV+TG+NGTIDGQGS WW+WF S LNYSRPHLV
Sbjct: 121 LPSYGRGMDLPGSRHRSLINGQNLIDVVITGNNGTIDGQGSTWWNWFRSNKLNYSRPHLV 180
Query: 181 EFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCI 240
EF+ SE +V+SN+TFLN+PA++IHPVYCSNV + ++++ ++P GIVPDS N+CI
Sbjct: 181 EFVDSEQIVISNITFLNSPAWSIHPVYCSNVVVHSVTIQTSLDAPLNHGIVPDSCSNMCI 240
Query: 241 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 300
ED I++ HDAISLKSGWD+ GIA+GRPT+D+HI R+ LQSS G+++ FGSEMSGGIS+V
Sbjct: 241 EDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQSSLGAALTFGSEMSGGISDV 300
Query: 301 QVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
+++ ++ S G+ F+T GRGGYIR VISD ++ +++VA G+ SHPDD FDP
Sbjct: 301 HADRLLIHSSFRGVFFKTAPGRGGYIRDTVISDVQMEDVDVAIAFTGDWPSHPDDQFDPT 360
Query: 361 ALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSI----NPGSYNSWECSN 416
ALP + IT K++ GT I++AG +GI PF +ICLSNI+ S+ +P S+ W CSN
Sbjct: 361 ALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSNINFSLADSASPTSH--WSCSN 418
Query: 417 IHGSSESVFPEPCPELENSSSNSSSTCFSLIRYY 450
+ G SE VFPEPC +L+ SS+ +S C +L ++
Sbjct: 419 VSGYSELVFPEPCLDLQTQSSD-ASICSTLPSFH 451
>gi|357150536|ref|XP_003575492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 451
Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust.
Identities = 251/398 (63%), Positives = 319/398 (80%), Gaps = 1/398 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RPHSV+ITEFGAVGDG T+NT+ FQNAIFYL+SFADKGGAQLYVP G+WLTGSFNLTSHL
Sbjct: 33 RPHSVTITEFGAVGDGVTVNTVPFQNAIFYLRSFADKGGAQLYVPKGRWLTGSFNLTSHL 92
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFLEK AVI+G++ + W +V+PLPSYG+GI+LPG R++SLING+ + DVV+TG+NG I
Sbjct: 93 TLFLEKDAVIVGTKEVTEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGVI 152
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG WW+WF S LNYSRPHLVEF SE +V+SNLTFLN+PA+ IHPVYCSNV + NI
Sbjct: 153 DGQGLTWWNWFRSNKLNYSRPHLVEFEDSEEIVISNLTFLNSPAWAIHPVYCSNVTVNNI 212
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ ++P + GIVPDS NVCIED I++ HDAISLKSGWD YGI +GRPT+D+HI R
Sbjct: 213 TIQTSLDAPLSDGIVPDSCSNVCIEDSRISVSHDAISLKSGWDNYGITFGRPTSDIHICR 272
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V LQ+S G+++A GSEMSGGIS+V V+ +H++ S G+ FRT GRGGYIR ++ISD ++
Sbjct: 273 VDLQASLGAALALGSEMSGGISDVHVDHLHIHASSKGVSFRTAPGRGGYIRDVIISDVQM 332
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+++VA G+ SHPD+ FDP ALP I IT K+++GTNI++AG +GI PF +IC
Sbjct: 333 EDVHVAIEFTGDWSSHPDEHFDPSALPVISGITLKNMVGTNISVAGVLSGIDGDPFTDIC 392
Query: 397 LSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELE 433
LSN++ SI +++ SW CSNI G SE VFPEPC +L+
Sbjct: 393 LSNVNFSIPDSAHSTSWSCSNISGYSELVFPEPCTDLQ 430
>gi|115489012|ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group]
gi|113649500|dbj|BAF30012.1| Os12g0554800, partial [Oryza sativa Japonica Group]
Length = 424
Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/420 (62%), Positives = 337/420 (80%), Gaps = 2/420 (0%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
PRPHSV+I+EFGAVGDG T+NTL FQNAIFYL+SFADKGGAQLYVP G+WLTGSFNLTSH
Sbjct: 5 PRPHSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSH 64
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
LT+FLEK AVI+G++ S W +V+PLPSYG+GI+LPG R++SLING+ + DVV+TG+NG
Sbjct: 65 LTIFLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGI 124
Query: 156 IDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
IDGQG WW+WF S LNYSRPHLVEF+ SE++V+SNLT LN+PA+ IHPV+CSNV + +
Sbjct: 125 IDGQGLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNVMVHD 184
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
+++ ++P T GIVPDS N+CIED I++ HDAISLKSGWD YGI GRP +D+HI
Sbjct: 185 VTIRTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHIS 244
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
RV LQ+S G+++AFGSEMSGGIS++ V+ ++++ S GI F+T GRGGYIR +VISD +
Sbjct: 245 RVDLQASLGAALAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQ 304
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
+ ++NVA G+ +HPD+ FDP ALP I++IT K+++GTNI++AG +GI PF NI
Sbjct: 305 MEDVNVAIKFTGDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNI 364
Query: 396 CLSNISLSI-NPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRAS 454
CLSNIS S+ + +SW CSNI G SE VFPEPCP+L +SSS +SS CFSL+ Y+ A+
Sbjct: 365 CLSNISFSLADSTQSSSWSCSNISGYSELVFPEPCPDLHHSSS-NSSICFSLLTYHALAA 423
>gi|81074755|gb|ABB55373.1| polygalacturonase-like protein-like [Solanum tuberosum]
Length = 479
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 269/432 (62%), Positives = 336/432 (77%), Gaps = 5/432 (1%)
Query: 25 DGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGK 84
+G+C L PRPHSVS+ +FGAVG GKT+N +AFQNAIFYLKSFADKGGAQ VP+GK
Sbjct: 53 EGECKFNKHLKPRPHSVSVLDFGAVGHGKTINNVAFQNAIFYLKSFADKGGAQFNVPAGK 112
Query: 85 WLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYML 144
WLT S N T T+ LEK AVIL S++ HWDVV+ LPSYGRGIE RY+SLI+G L
Sbjct: 113 WLTRSINFTCTYTV-LEKDAVILASEDFDHWDVVEALPSYGRGIEAQYGRYRSLISGNNL 171
Query: 145 RDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIH 204
DVV+TG+NGTIDGQGS+WW+ F+S SLNY+RPHLVEF+SS NVV+SNLT LNAP +NI
Sbjct: 172 TDVVITGNNGTIDGQGSIWWEKFNSHSLNYTRPHLVEFVSSRNVVISNLTLLNAPGWNIR 231
Query: 205 PVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIA 264
P YCSNV IQN++V+ P +SP+T GIVPDSS++VCIE+ I+MG+DAI LKSGWDEYGI+
Sbjct: 232 PAYCSNVVIQNLTVYTPQDSPFTNGIVPDSSEHVCIENSNISMGYDAIVLKSGWDEYGIS 291
Query: 265 YGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGG 324
YG+PT++VHIRRV LQS++G+ VA GSEMSGGIS+V VE L+DSL GIE +T +GRGG
Sbjct: 292 YGKPTSNVHIRRVRLQSAAGAGVALGSEMSGGISDVLVELSSLHDSLFGIELKTARGRGG 351
Query: 325 YIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNF 384
+I+ I+IS+ + N+ V A G HPD+ +DP +LP + ITF+DI+GTNI+IAGNF
Sbjct: 352 FIKDILISNVVMDNLQVGIKATGYSDMHPDEKYDPSSLPTVSGITFEDIVGTNISIAGNF 411
Query: 385 TGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTCF 444
TG+ E+PF +ICLSNIS+SI+ W CSNI GSS++V PEPCPEL+ S S+CF
Sbjct: 412 TGLSESPFTSICLSNISISISSDPSTPWLCSNISGSSKNVSPEPCPELQ----GSFSSCF 467
Query: 445 SLIRYYGRASFL 456
+L Y + L
Sbjct: 468 ALPNPYTEVAVL 479
>gi|108862809|gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|222617271|gb|EEE53403.1| hypothetical protein OsJ_36464 [Oryza sativa Japonica Group]
Length = 457
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 258/417 (61%), Positives = 334/417 (80%), Gaps = 2/417 (0%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
HSV+I+EFGAVGDG T+NTL FQNAIFYL+SFADKGGAQLYVP G+WLTGSFNLTSHLT+
Sbjct: 41 HSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTI 100
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
FLEK AVI+G++ S W +V+PLPSYG+GI+LPG R++SLING+ + DVV+TG+NG IDG
Sbjct: 101 FLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGIIDG 160
Query: 159 QGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISV 218
QG WW+WF S LNYSRPHLVEF+ SE++V+SNLT LN+PA+ IHPV+CSNV + ++++
Sbjct: 161 QGLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNVMVHDVTI 220
Query: 219 HAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVL 278
++P T GIVPDS N+CIED I++ HDAISLKSGWD YGI GRP +D+HI RV
Sbjct: 221 RTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVD 280
Query: 279 LQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYN 338
LQ+S G+++AFGSEMSGGIS++ V+ ++++ S GI F+T GRGGYIR +VISD ++ +
Sbjct: 281 LQASLGAALAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMED 340
Query: 339 INVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLS 398
+NVA G+ +HPD+ FDP ALP I++IT K+++GTNI++AG +GI PF NICLS
Sbjct: 341 VNVAIKFTGDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLS 400
Query: 399 NISLSI-NPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRAS 454
NIS S+ + +SW CSNI G SE VFPEPCP+L +SSS +SS CFSL+ Y+ A+
Sbjct: 401 NISFSLADSTQSSSWSCSNISGYSELVFPEPCPDLHHSSS-NSSICFSLLTYHALAA 456
>gi|359480238|ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
gi|297744085|emb|CBI37055.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 246/406 (60%), Positives = 310/406 (76%), Gaps = 2/406 (0%)
Query: 27 QCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWL 86
CD + RPHSV+ITEFGAVGDG TLNT AFQNAIFYL SFADKGGAQL+VP+G+WL
Sbjct: 29 HCDQTSSGVIRPHSVAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWL 88
Query: 87 TGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRD 146
TGSF+L SHLTL+L+K AVILGS N + W V+DPLPSYGRG ELPGRR++SLI G L D
Sbjct: 89 TGSFDLISHLTLWLDKDAVILGSMNSNDWPVIDPLPSYGRGRELPGRRHRSLIYGCNLTD 148
Query: 147 VVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
V+VTGDNGTIDGQGS+WW+WF ++LNY+RPHLVEFI+S VV+SN+TFLN+P + IHPV
Sbjct: 149 VIVTGDNGTIDGQGSIWWNWFQKKTLNYTRPHLVEFINSTGVVISNVTFLNSPFWTIHPV 208
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
YCS V IQN+++ AP +SP T GI PDSS++VCIEDC I+ G D I++KSGWDEYGI+Y
Sbjct: 209 YCSQVIIQNVTILAPLDSPNTDGIDPDSSNDVCIEDCYISTGDDLIAIKSGWDEYGISYA 268
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
RP+T++ IRR++ +++S + +A GSEMSGG+S V E + ++S GI +T+ GRGGY+
Sbjct: 269 RPSTNIIIRRLVGKTNSSAGIAIGSEMSGGVSEVHAESLQFFNSKTGIRIKTSPGRGGYV 328
Query: 327 RQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTG 386
R I ISD L ++ +A G G HPD+ +DP ALP I+ IT KD++G NI AG G
Sbjct: 329 RNIYISDMNLVDVKIAIRFTGQYGEHPDEFYDPTALPIIENITVKDVMGENIKFAGLLEG 388
Query: 387 IQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPEL 432
I+ F NICLSNI+L++ S + W CS IHG S+ V PE C L
Sbjct: 389 IEGDNFVNICLSNITLNVT--SESPWNCSYIHGYSDLVSPEACEPL 432
>gi|255589944|ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223523955|gb|EEF27252.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 476
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 249/424 (58%), Positives = 312/424 (73%), Gaps = 3/424 (0%)
Query: 27 QCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWL 86
C + D RPHSV+ITEFGAVGDG TLNT AFQNAIFYL SF+DKGGA+L+VP+G+WL
Sbjct: 39 HCKRANSADIRPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWL 98
Query: 87 TGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRD 146
TGSF+L SHLTL+L+K AVILGS N W VVD LPSYGRG ELPG R++SLI G L D
Sbjct: 99 TGSFDLISHLTLWLDKNAVILGSTNSDDWPVVDALPSYGRGRELPGGRHRSLIYGRNLTD 158
Query: 147 VVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
VV+TGDNGTIDGQGS+WW WF ++SLNY+RPHLVE ++S +V+SNLTF+N+P + IHPV
Sbjct: 159 VVITGDNGTIDGQGSIWWTWFKTESLNYTRPHLVELMNSSGIVISNLTFINSPFWTIHPV 218
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
YCS V +QN+++ AP +SP T GI PDSSD+VCIEDC I+ G D I++KSGWDEYGI YG
Sbjct: 219 YCSKVIVQNVTIRAPLDSPNTDGIDPDSSDDVCIEDCFISTGDDLIAIKSGWDEYGILYG 278
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
RP ++ IRR++ Q+ S + +A GSEMSGG+S V E I Y+S GI +T+ GRGGY+
Sbjct: 279 RPCRNITIRRLVGQTRSSAGIAIGSEMSGGVSEVHAENILFYNSNTGIRIKTSPGRGGYV 338
Query: 327 RQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTG 386
R I +S+ L ++N+A GN G HPD+ +DP ALP I++IT + ++G NI AG G
Sbjct: 339 RNIYVSNVTLNDVNIAIRFTGNYGEHPDEHYDPKALPIIERITIEHVMGDNIKYAGILDG 398
Query: 387 IQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPC-PELENSSSNSSSTCFS 445
I+ F NICLSNISL++ S W CS I G SESV PE C P E+ + S C+
Sbjct: 399 IEADSFVNICLSNISLNVT--SKFPWNCSYIQGYSESVSPEICEPLRESIPPDHYSNCYH 456
Query: 446 LIRY 449
L Y
Sbjct: 457 LSNY 460
>gi|356572848|ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 467
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 258/450 (57%), Positives = 327/450 (72%), Gaps = 8/450 (1%)
Query: 1 MKMP---VALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNT 57
M++P V +LL+ AL + S+ C Q + RPHSVSITEFGAVGDG TLNT
Sbjct: 1 MRIPSTLVEVLLVFALFCSSPWTVWSSNTLCQ-QTNEEVRPHSVSITEFGAVGDGVTLNT 59
Query: 58 LAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDV 117
AFQNAIFYL SFADKGGA+L+VP+G+WLTGSF+L SHLTL+L+K AVILGS NP W V
Sbjct: 60 KAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTLWLDKDAVILGSTNPEDWPV 119
Query: 118 VDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRP 177
VDPLPSYGRG ELPG R+KSLI G+ L DV++TG+NGTIDGQGS+WW+ F +++L+Y+RP
Sbjct: 120 VDPLPSYGRGRELPGGRHKSLIYGHNLTDVIITGNNGTIDGQGSIWWNRFMNRTLDYTRP 179
Query: 178 HLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDN 237
HLVE ++S V++SNLTFLN+P + IHPVYCS V +QN+ + AP +SP T GI PDSSDN
Sbjct: 180 HLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQVTVQNVRILAPHDSPNTDGIDPDSSDN 239
Query: 238 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 297
VCIEDC I+ G D I++KSGWDEYGIAYGRP+T++ I R L+ + S +A GSEMSGG+
Sbjct: 240 VCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHR-LVGKTQTSGIAIGSEMSGGV 298
Query: 298 SNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDF 357
S V E I YDS NGI +T+ GRGGY+R I +S+ L N+++A G+ G HPDD +
Sbjct: 299 SEVHAEDIQFYDSYNGIRIKTSPGRGGYVRNIYVSNVSLANVDIAIWFTGSYGEHPDDAY 358
Query: 358 DPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNI 417
DP+ALP I+++T KD++G NI AG GI+ F NICLSNI L++ S W CS +
Sbjct: 359 DPNALPVIEKVTIKDVVGENIKTAGLIEGIEGDNFVNICLSNIILNVT--SNYPWNCSYV 416
Query: 418 HGSSESVFPEPC-PELENSSSNSSSTCFSL 446
G S+ V PE C P E + S C+ L
Sbjct: 417 KGYSDLVQPEACEPLKERIFPDHCSDCYYL 446
>gi|18397713|ref|NP_566292.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|30680007|ref|NP_850526.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|7549636|gb|AAF63821.1| unknown protein [Arabidopsis thaliana]
gi|332640933|gb|AEE74454.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332640934|gb|AEE74455.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 248/368 (67%), Positives = 303/368 (82%)
Query: 69 SFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGI 128
SFADKGGAQLYVP G WLTGSF+LTSHLTLFLE GAVI+ SQ+PSHW+VVDPLPSYGRGI
Sbjct: 2 SFADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENGAVIVASQDPSHWEVVDPLPSYGRGI 61
Query: 129 ELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENV 188
+LPG+RYKSLING L DVVVTGDNGTIDGQG VWWD F+S SL Y+RPHL+EF+SSENV
Sbjct: 62 DLPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENV 121
Query: 189 VVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMG 248
+VSNLTFLNAPAY+I+ +Y S+V+I I H+ P+SPYT+GIVPDSSD VCI++ I +G
Sbjct: 122 IVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVG 181
Query: 249 HDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY 308
+DAISLKSGWDEYGIAY RPT +VHIR V L+ +SGSS++FGSEMSGGIS+V V+ H++
Sbjct: 182 YDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHIH 241
Query: 309 DSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQI 368
SL GI FRTTKGRGGYI++I IS+ ++ I A A G+ GSHPDD +D +ALP + I
Sbjct: 242 YSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHI 301
Query: 369 TFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEP 428
+I G NI IAG GI+E+PF+++ LSN+SLS++ GS SW+CS ++GSSESV PEP
Sbjct: 302 RLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSWQCSYVYGSSESVIPEP 361
Query: 429 CPELENSS 436
CPEL+ +
Sbjct: 362 CPELKRDA 369
>gi|21593399|gb|AAM65366.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/368 (67%), Positives = 302/368 (82%)
Query: 69 SFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGI 128
SFADKGGAQLYVP G WLTGSF+LTSHLTLFLE AVI+ SQ+PSHW+VVDPLPSYGRGI
Sbjct: 2 SFADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENDAVIVASQDPSHWEVVDPLPSYGRGI 61
Query: 129 ELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENV 188
+LPG+RYKSLING L DVVVTGDNGTIDGQG VWWD F+S SL Y+RPHL+EF+SSENV
Sbjct: 62 DLPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENV 121
Query: 189 VVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMG 248
+VSNLTFLNAPAY+I+ +Y S+V+I I H+ P+SPYT+GIVPDSSD VCI++ I +G
Sbjct: 122 IVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVG 181
Query: 249 HDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY 308
+DAISLKSGWDEYGIAY RPT +VHIR V L+ +SGSS++FGSEMSGGIS+V V+ H++
Sbjct: 182 YDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHIH 241
Query: 309 DSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQI 368
SL GI FRTTKGRGGYI++I IS+ ++ I A A G+ GSHPDD +D +ALP + I
Sbjct: 242 YSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHI 301
Query: 369 TFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEP 428
+I G NI IAG GI+E+PF+++ LSN+SLS++ GS SW+CS ++GSSESV PEP
Sbjct: 302 RLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSWQCSYVYGSSESVIPEP 361
Query: 429 CPELENSS 436
CPEL+ +
Sbjct: 362 CPELKRDA 369
>gi|357511567|ref|XP_003626072.1| Polygalacturonase [Medicago truncatula]
gi|355501087|gb|AES82290.1| Polygalacturonase [Medicago truncatula]
Length = 466
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/443 (56%), Positives = 326/443 (73%), Gaps = 6/443 (1%)
Query: 5 VALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAI 64
V L+L L CS+ + S C + RPHSVSITEFGAVGDG TLNT AFQNAI
Sbjct: 10 VFLVLALFCCSSWKV---WSSTLCKETNLDKVRPHSVSITEFGAVGDGITLNTKAFQNAI 66
Query: 65 FYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSY 124
FYL SF+DKGGA+L+VP+G+WLTGSF+L SHLTL+L+K A+ILGS N W VVDPLPSY
Sbjct: 67 FYLNSFSDKGGAKLFVPAGRWLTGSFDLISHLTLWLDKDAIILGSTNSEDWPVVDPLPSY 126
Query: 125 GRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFIS 184
GRG ELPG R++SLI G L DV++TG+ G IDGQGS+WW F +++L+Y+RPHLVE ++
Sbjct: 127 GRGRELPGGRHRSLIYGCNLTDVIITGNEGIIDGQGSIWWSMFRNKTLDYTRPHLVELMN 186
Query: 185 SENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCI 244
S V++SNLTFLN+P + IHPVYCS V +QN+++ AP +SP T GI PDSSD+VCIEDC
Sbjct: 187 STRVLISNLTFLNSPFWTIHPVYCSQVTVQNVTILAPLDSPNTDGIDPDSSDDVCIEDCY 246
Query: 245 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 304
I+ G D I++KSGWDEYGIA+GRP+T++ I R++ ++ + + +A GSEMSGG+S+V+ E
Sbjct: 247 ISTGDDLIAIKSGWDEYGIAFGRPSTNIVIHRLVGKTHTSAGIAIGSEMSGGVSDVRAED 306
Query: 305 IHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPA 364
IH YDS I +T+ GRGGY+R I +++ L N+++A G+ G HPDD +DP+ALP
Sbjct: 307 IHFYDSYTAIRIKTSPGRGGYVRNIYVTNMTLANVDIAIRFTGSYGDHPDDAYDPNALPV 366
Query: 365 IDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESV 424
I++IT +D+IG NIT AG GI+ F NICLSNI+L+++ S W CSNI G S+ V
Sbjct: 367 IEKITIEDVIGENITKAGLIEGIEGDNFVNICLSNITLNVS--SNYPWNCSNIRGYSDMV 424
Query: 425 FPEPC-PELENSSSNSSSTCFSL 446
FPE C P E + S C+ L
Sbjct: 425 FPEACEPLKERIFPDHCSDCYYL 447
>gi|224064770|ref|XP_002301554.1| predicted protein [Populus trichocarpa]
gi|222843280|gb|EEE80827.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 245/421 (58%), Positives = 317/421 (75%), Gaps = 5/421 (1%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RPHSV+ITEFGAVGDG TLNT AFQNAIFYL SFADKGGA+L+VP+G+WLTGSF+L SHL
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPTGRWLTGSFDLISHL 98
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L+K AVILGS N W V+DPLPSYGRG ELPGRR+KSLI G L DV++TGDNGTI
Sbjct: 99 TLWLDKDAVILGSTNSDDWPVIDPLPSYGRGRELPGRRHKSLIYGRNLTDVIITGDNGTI 158
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQGS+WWDWF +Q+LNY+RPHLVEF+++ VV+SNLTF+N+P + IHPVYCS V +QN+
Sbjct: 159 DGQGSIWWDWFRNQTLNYTRPHLVEFMNTTGVVISNLTFINSPFWTIHPVYCSQVIVQNV 218
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP +SP T GI PDSSD+VC+EDC ++ G D I++KSGWDEYG++YGRP+ ++ IRR
Sbjct: 219 TILAPLDSPNTDGIDPDSSDDVCVEDCYVSTGDDIIAIKSGWDEYGMSYGRPSKNITIRR 278
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
++ Q++S + +A GSEMSGG+S V E + Y+S GI +T+ GRGGY+R I IS+ L
Sbjct: 279 LVGQTTS-AGIAIGSEMSGGVSEVHAENLRFYNSTTGIRIKTSPGRGGYVRNIYISNMSL 337
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
++ A G G HPD+ +DP ALP I++IT +D+ G N+ AG GI+ F +IC
Sbjct: 338 TDVKTAISFTGRYGEHPDEYYDPTALPLIERITVEDVAGQNVKYAGLLEGIEGDTFLDIC 397
Query: 397 LSNISLSINPGSYNSWECSNIHGSSESVFPEPC-PELENSSSNSSSTCFSLIRY-YGRAS 454
L NI+LS+ S + W CS I G S++V PE C P E + S C+S +Y G +S
Sbjct: 398 LLNINLSVT--SKSPWNCSYIQGYSDTVSPEICEPLRERIFPDHYSDCYSPYKYGNGSSS 455
Query: 455 F 455
F
Sbjct: 456 F 456
>gi|302767254|ref|XP_002967047.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
gi|300165038|gb|EFJ31646.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
Length = 478
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/430 (57%), Positives = 313/430 (72%), Gaps = 10/430 (2%)
Query: 28 CDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLT 87
C +L RPHSVSIT+FGAVGDG+ +NTLAFQNAIFYLKSFADKGGAQLYVP G+WLT
Sbjct: 49 CCSPRSLPKRPHSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLT 108
Query: 88 GSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDV 147
GSFNLTSHLTLFLE+GAVILGSQ+ W V+ LPSYGRG ELPG R+ SLI+G + DV
Sbjct: 109 GSFNLTSHLTLFLEEGAVILGSQDLLEWPVIPALPSYGRGRELPGGRHISLIHGKNMVDV 168
Query: 148 VVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
V+TG NGTIDGQGSVWWDWF +++L+++R HLVE I S ++ +SN+TF N+P + IHPVY
Sbjct: 169 VITGANGTIDGQGSVWWDWFHNKTLDFTRGHLVELIDSRHITISNVTFKNSPFWTIHPVY 228
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
CS+V IQ++++ APP +P GI PDSS NVCI DC I+ G D IS+KSGWDE+GI YG
Sbjct: 229 CSDVLIQDVTILAPPYAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGM 288
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
P+T+V I V QS + + +AFGSEMSGGIS+V ++ + + +S +GI +T GRGGYI
Sbjct: 289 PSTNVCIHNVSGQSPTSAGIAFGSEMSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYIT 348
Query: 328 QIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGI 387
I ISD +L N++VAF G HPDD +DP ALP I I+ +D++G I AG G+
Sbjct: 349 NISISDLQLENVSVAFDFTALYGGHPDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGL 408
Query: 388 QEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSN-------SS 440
+EAPF ++C +N+SLS+ G +W CSN +G SE V P PC EL+ +
Sbjct: 409 EEAPFRDLCFANVSLSVGAG---AWNCSNTYGFSERVVPSPCLELDRKQQQDGGFCFGEA 465
Query: 441 STCFSLIRYY 450
S+CF IR Y
Sbjct: 466 SSCFEAIRQY 475
>gi|297817560|ref|XP_002876663.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322501|gb|EFH52922.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/413 (58%), Positives = 308/413 (74%), Gaps = 3/413 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RPHSVSITEFGAVGDG TLNT AFQNA+FYL SF+DKGGA+L+VP+G+WLTGSF+L SHL
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHL 98
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L+KGA ILGS + +W VVDPLPSYGRG ELPGRR++SLI G L DVV+TG+NGTI
Sbjct: 99 TLWLDKGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTI 158
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQGSVWWDWF + LNY+RPHLVE ++S +++SNLTFLN+P +NIHPVYC +V ++N+
Sbjct: 159 DGQGSVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNL 218
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP ESP T G+ PDSS NVCIEDC I G D +S+KSGWDEYGI+Y RP++ + I R
Sbjct: 219 TILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINR 278
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ Q++S S +A GSEMSGG+S + ++ +HL++S GI +T+ GRGGY+R + I + +L
Sbjct: 279 LTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKL 338
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
N+ A G G HPD+ FDP ALPAI++ITF+++ G I +AG GI F NIC
Sbjct: 339 DNVKKAIRFTGKYGEHPDEKFDPKALPAIEKITFENVNGDGIGVAGLLEGIAGDEFKNIC 398
Query: 397 LSNISLSINPGSYNS-WECSNIHGSSESVFPE-PCPELENS-SSNSSSTCFSL 446
N++L + S S WECSN+ G S+ V PE C L+ S S CF L
Sbjct: 399 FLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLKESIFPEHQSDCFGL 451
>gi|18412253|ref|NP_567126.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|11762132|gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana]
gi|23397166|gb|AAN31866.1| unknown protein [Arabidopsis thaliana]
gi|332646790|gb|AEE80311.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 471
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/413 (57%), Positives = 309/413 (74%), Gaps = 3/413 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RPHSVSITEFGAVGDG TLNT AFQNA+FYL SF+DKGGA+L+VP+G+WLTGSF+L SHL
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHL 98
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L+KGA ILGS + +W VVDPLPSYGRG ELPGRR++SLI G L DVV+TG+NGTI
Sbjct: 99 TLWLDKGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTI 158
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG+VWWDWF + LNY+RPHLVE ++S +++SNLTFLN+P +NIHPVYC +V ++N+
Sbjct: 159 DGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNL 218
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP ESP T G+ PDSS NVCIEDC I G D +S+KSGWDEYGI+Y RP++ + I R
Sbjct: 219 TILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINR 278
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ Q++S S +A GSEMSGG+S + ++ +HL++S GI +T+ GRGGY+R + I + +L
Sbjct: 279 LTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKL 338
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
N+ A G G HPD+ +DP ALPAI++ITF+++ G I +AG GI+ F NIC
Sbjct: 339 DNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNIC 398
Query: 397 LSNISLSINPGSYNS-WECSNIHGSSESVFPE-PCPELENS-SSNSSSTCFSL 446
N++L + S S WECSN+ G S+ V PE C L+ S S CF L
Sbjct: 399 FLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLKESIFPEHGSDCFGL 451
>gi|359807069|ref|NP_001241086.1| uncharacterized protein LOC100817309 precursor [Glycine max]
gi|255636991|gb|ACU18828.1| unknown [Glycine max]
Length = 467
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 249/417 (59%), Positives = 308/417 (73%), Gaps = 4/417 (0%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
Q + RPHSVSITEFGAVGDG TLNT AFQNAIFYL SFADKGGA+L+VP+G+WLTGSF
Sbjct: 33 QTNEEVRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSF 92
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
+L SHLTL L+K AVILGS NP W VVDPLPSYGRG ELPG R+KSLI G+ L DV++T
Sbjct: 93 DLISHLTLSLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGGRHKSLIYGHNLTDVIIT 152
Query: 151 GDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSN 210
G+NGTIDGQGS+WW+ F ++SL+Y+RPHLVE ++S V++SNLTFLN+P + IHPVYCS
Sbjct: 153 GNNGTIDGQGSIWWNRFWNRSLDYTRPHLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQ 212
Query: 211 VHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTT 270
V +QN+ + AP +SP T GI PDSSDNVCIEDC I+ G D I++KSGWDEYGIAYGRP+T
Sbjct: 213 VTVQNVRILAPHDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPST 272
Query: 271 DVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIV 330
++ I R L+ + S +A GSEMSGG+S V E I YDS N I +T+ GRGGY+R I
Sbjct: 273 NIIIHR-LVGRTQTSGIAIGSEMSGGVSEVHAEDIQFYDSYNAIRIKTSPGRGGYVRNIY 331
Query: 331 ISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEA 390
+S+ L N+++A G G HPDD ++P+ALP I++IT KD++G NI AG GI+
Sbjct: 332 VSNVTLANVDIAITFTGLYGEHPDDAYNPNALPVIEKITIKDVVGENIKTAGLIEGIEGD 391
Query: 391 PFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPC-PELENSSSNSSSTCFSL 446
F NICLSNI L++ S W CS + G S+ V PE C P E S C+ L
Sbjct: 392 NFVNICLSNIILNVT--SNYPWNCSYVKGYSDLVQPEACEPLKERIFPGHCSDCYYL 446
>gi|226497942|ref|NP_001151479.1| polygalacturonase precursor [Zea mays]
gi|195647062|gb|ACG42999.1| polygalacturonase [Zea mays]
Length = 477
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 245/446 (54%), Positives = 318/446 (71%), Gaps = 5/446 (1%)
Query: 1 MKMPVALL-LLLALCSAILIN-GEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTL 58
MK +L +LL + I I VS C D P RPHSV+ITEFGAVGDG TLNT
Sbjct: 1 MKRSASLFQVLLVFTAVIEIQWSTVSSIYCKDMPPNVYRPHSVTITEFGAVGDGVTLNTK 60
Query: 59 AFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVV 118
AFQNAIFYL SFADKGGAQL+VP+G+WLTGSF+L SHLTL L+K A+I+GS + SHW V+
Sbjct: 61 AFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHLTLSLDKDAIIIGSPDSSHWPVI 120
Query: 119 DPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPH 178
DPLPSYGRG +LPG+R++SLI G L DV++TG NG+IDGQG++WW WF + +LNY+RPH
Sbjct: 121 DPLPSYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSIDGQGAIWWGWFHNHTLNYTRPH 180
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
LVE + S NVV+SNLTF N+P +NIHPVYCS V +Q++++ AP SP T G+ PDSS NV
Sbjct: 181 LVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGVTPDSSTNV 240
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
CI C + G D I +KSGWDEYGI++ +P++++ I + ++ GS +AFGSEMSGGIS
Sbjct: 241 CINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEMSGGIS 300
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD 358
V+ + + +SL+GI +T GRGGY+ + I+D + N+++A GN G HPDD +D
Sbjct: 301 EVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHPDDKYD 360
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIH 418
ALP I IT KD++G NI +AG GIQ F+NICLSN+SLS+ S + W CS I
Sbjct: 361 STALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQ--SAHPWNCSLIE 418
Query: 419 GSSESVFPEPCPELENSSSNSSSTCF 444
G S SV PE C +L S+ +S C+
Sbjct: 419 GYSNSVIPESCEQLR-SNCRQTSICY 443
>gi|242032389|ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
gi|241917443|gb|EER90587.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
Length = 459
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/422 (56%), Positives = 309/422 (73%), Gaps = 3/422 (0%)
Query: 23 VSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPS 82
VS C D P RPHSV+ITEFGA+GDG TLNT AFQNAIFYL SFADKGGAQL+VP+
Sbjct: 9 VSSIYCKDMPPNVYRPHSVTITEFGAIGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPA 68
Query: 83 GKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGY 142
G+WLTGSFNL SHLTL L+K AVI+GS + SHW V+DPLPSYGRG ELPG+R++SLI G
Sbjct: 69 GRWLTGSFNLISHLTLSLDKDAVIIGSPDSSHWPVIDPLPSYGRGRELPGKRHQSLIFGL 128
Query: 143 MLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYN 202
L DV++TG NG+IDGQG++WW WF + +LNY+RPHLVE + S NVV+SNLTF N+P +N
Sbjct: 129 NLTDVIITGANGSIDGQGAIWWGWFRNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWN 188
Query: 203 IHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYG 262
IHPVYCS V +Q++++ AP SP T G+ PDSS NVCI C + G D I +KSGWDEYG
Sbjct: 189 IHPVYCSQVLVQHVTILAPLNSPNTDGVSPDSSTNVCINHCYVRNGDDVIVIKSGWDEYG 248
Query: 263 IAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGR 322
I++ +P++++ I + ++ G+ +AFGSEMSGGIS V+ + + +SL+GI +T GR
Sbjct: 249 ISFAQPSSNISISDITGETRGGAGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGR 308
Query: 323 GGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAG 382
GGY++ + I+D + N+++A GN G HPDD +D ALP I IT KD++G NI +AG
Sbjct: 309 GGYVKNVYIADVSMDNVSMAIRITGNYGEHPDDKYDRTALPVISNITIKDVVGVNIGVAG 368
Query: 383 NFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSST 442
GIQ F+NICLSN+SLS+ S + W CS I G S SV PE C +L+ S+ +
Sbjct: 369 ILEGIQGDNFSNICLSNVSLSVQ--SAHPWNCSLIEGYSNSVIPESCEQLK-SNCRQTPI 425
Query: 443 CF 444
C+
Sbjct: 426 CY 427
>gi|223948047|gb|ACN28107.1| unknown [Zea mays]
gi|414873755|tpg|DAA52312.1| TPA: polygalacturonase isoform 1 [Zea mays]
gi|414873756|tpg|DAA52313.1| TPA: polygalacturonase isoform 2 [Zea mays]
Length = 477
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/446 (54%), Positives = 318/446 (71%), Gaps = 5/446 (1%)
Query: 1 MKMPVALL-LLLALCSAILIN-GEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTL 58
MK +L +LL + I I VS C D P RPHSV+ITEFGAVGDG TLNT
Sbjct: 1 MKRSASLFQVLLVFTAVIEIQWSTVSSIYCKDMPPNVYRPHSVTITEFGAVGDGVTLNTK 60
Query: 59 AFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVV 118
AFQNAIFYL SFADKGGAQL+VP+G+WLTGSF+L SHLTL L+K A+I+GS + SHW V+
Sbjct: 61 AFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHLTLSLDKDAIIIGSPDSSHWPVI 120
Query: 119 DPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPH 178
DPLPSYGRG +LPG+R++SLI G L DV++TG NG+IDGQG++WW WF + +LNY+RPH
Sbjct: 121 DPLPSYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSIDGQGAIWWGWFHNHTLNYTRPH 180
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
LVE + S NVV+SNLTF N+P +NIHPVYCS V ++++++ AP SP T G+ PDSS NV
Sbjct: 181 LVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVRHVTILAPLNSPNTDGVTPDSSTNV 240
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
CI C + G D I +KSGWDEYGI++ +P++++ I + ++ GS +AFGSEMSGGIS
Sbjct: 241 CINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEMSGGIS 300
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD 358
V+ + + +SL+GI +T GRGGY+ + I+D + N+++A GN G HPDD +D
Sbjct: 301 EVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHPDDKYD 360
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIH 418
ALP I IT KD++G NI +AG GIQ F+NICLSN+SLS+ S + W CS I
Sbjct: 361 STALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQ--SAHPWNCSLIE 418
Query: 419 GSSESVFPEPCPELENSSSNSSSTCF 444
G S SV PE C +L S+ +S C+
Sbjct: 419 GYSNSVIPESCEQLR-SNCRQTSICY 443
>gi|6899921|emb|CAB71871.1| putative protein [Arabidopsis thaliana]
Length = 470
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/413 (57%), Positives = 308/413 (74%), Gaps = 4/413 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RPHSVSITEFGAVGDG TLNT AFQNA+FYL SF+DKGGA+L+VP+G+WLTGSF+L SHL
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHL 98
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L+KGA ILGS +W VVDPLPSYGRG ELPGRR++SLI G L DVV+TG+NGTI
Sbjct: 99 TLWLDKGATILGS-TAKNWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTI 157
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG+VWWDWF + LNY+RPHLVE ++S +++SNLTFLN+P +NIHPVYC +V ++N+
Sbjct: 158 DGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNL 217
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP ESP T G+ PDSS NVCIEDC I G D +S+KSGWDEYGI+Y RP++ + I R
Sbjct: 218 TILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINR 277
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ Q++S S +A GSEMSGG+S + ++ +HL++S GI +T+ GRGGY+R + I + +L
Sbjct: 278 LTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKL 337
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
N+ A G G HPD+ +DP ALPAI++ITF+++ G I +AG GI+ F NIC
Sbjct: 338 DNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNIC 397
Query: 397 LSNISLSINPGSYNS-WECSNIHGSSESVFPE-PCPELENS-SSNSSSTCFSL 446
N++L + S S WECSN+ G S+ V PE C L+ S S CF L
Sbjct: 398 FLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLKESIFPEHGSDCFGL 450
>gi|356501839|ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 254/444 (57%), Positives = 325/444 (73%), Gaps = 9/444 (2%)
Query: 5 VALLLLLALCSAILINGEVSDGQCDDQPTLDP-RPHSVSITEFGAVGDGKTLNTLAFQNA 63
V L+L L CS V C +Q L+ RPHSVSITEFGAVGDG TLNT AFQNA
Sbjct: 18 VFLVLALFSCST----WTVWSSSCCNQINLNEVRPHSVSITEFGAVGDGITLNTKAFQNA 73
Query: 64 IFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPS 123
IFYL SFADKGGA+L+VP+G+WLTGSF+L SHLTL+L+ AVILGS N W VVDPLPS
Sbjct: 74 IFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTLWLDNDAVILGSTNSDDWPVVDPLPS 133
Query: 124 YGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFI 183
YGRG ELPG R++SLI G L DVV+TG+NGTIDGQGS+WW+ F +++LNY+RPHLVE +
Sbjct: 134 YGRGRELPGGRHRSLIYGCNLTDVVITGNNGTIDGQGSIWWNNFWNKTLNYTRPHLVELM 193
Query: 184 SSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDC 243
+S V++SN+TFLN+P + IHPVYCS+V IQN+++ AP SP T GI PDSSDNVCIEDC
Sbjct: 194 NSTGVLISNVTFLNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTDGINPDSSDNVCIEDC 253
Query: 244 IIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVE 303
I+ G D IS+KSGWD YGI++GRP+T+++IRR++ +++S + +A GSEMSGG+S V E
Sbjct: 254 YISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKTTS-AGIAIGSEMSGGVSEVHAE 312
Query: 304 KIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALP 363
I+++DS + I +T+ GRGGY+R + IS+ L N+++A G G HPDD +DPDALP
Sbjct: 313 DIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILANVDIAIRFTGLYGEHPDDTYDPDALP 372
Query: 364 AIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSES 423
I++IT KD+IG + AG GI+ F NICLSNI+L+++ S W CS I G S+
Sbjct: 373 VIERITIKDVIGVKVKHAGLIQGIKGDNFVNICLSNITLNVS--SKLPWNCSYIKGFSDL 430
Query: 424 VFPEPC-PELENSSSNSSSTCFSL 446
V PE C P E S C+ L
Sbjct: 431 VSPEACEPLKERIFPEHCSDCYYL 454
>gi|302755072|ref|XP_002960960.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
gi|300171899|gb|EFJ38499.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
Length = 393
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 239/396 (60%), Positives = 301/396 (76%), Gaps = 3/396 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RPHSVSIT+FGAVGDG+ +NTLAFQNAIFYLKSFADKGGAQLYVP G+WLTGSFNLTSHL
Sbjct: 1 RPHSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLTGSFNLTSHL 60
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFLE+GAVILGSQ+ W V+ LPSYGRG ELPG R+ SLI+G + DVV+TG NGTI
Sbjct: 61 TLFLEEGAVILGSQDLLEWPVIPALPSYGRGRELPGGRHISLIHGKNMVDVVITGANGTI 120
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQGSVWWDWF +++L+++R HLVE I S ++ +SN+TF N+P + IHPVYCS+V IQ++
Sbjct: 121 DGQGSVWWDWFHNKTLDFTRGHLVELIDSRHITISNVTFKNSPFWTIHPVYCSDVLIQDV 180
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ APP +P GI PDSS NVCI DC I+ G D IS+KSGWDE+GI YG P+T+V I
Sbjct: 181 TILAPPYAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHN 240
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V QS + + +AFGSEMSGGIS+V ++ + + +S +GI +T GRGGYI I ISD +L
Sbjct: 241 VSGQSPTSAGIAFGSEMSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQL 300
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
N++VAF G HPDD +DP ALP I I+ +D++G I AG G++EAPF ++C
Sbjct: 301 ENVSVAFDFTALYGGHPDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLC 360
Query: 397 LSNISLSINPGSYNSWECSNIHGSSESVFPEPCPEL 432
+N+SLS+ G +W CSN +G SE V P PC EL
Sbjct: 361 FANVSLSVGAG---AWNCSNTYGFSERVVPSPCLEL 393
>gi|224032157|gb|ACN35154.1| unknown [Zea mays]
Length = 430
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/431 (55%), Positives = 310/431 (71%), Gaps = 4/431 (0%)
Query: 1 MKMPVALL-LLLALCSAILIN-GEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTL 58
MK +L +LL + I I VS C D P RPHSV+ITEFGAVGDG TLNT
Sbjct: 1 MKRSASLFQVLLVFTAVIEIQWSTVSSIYCKDMPPNVYRPHSVTITEFGAVGDGVTLNTK 60
Query: 59 AFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVV 118
AFQNAIFYL SFADKGGAQL+VP+G+WLTGSF+L SHLTL L+K A+I+GS + SHW V+
Sbjct: 61 AFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHLTLSLDKDAIIIGSPDSSHWPVI 120
Query: 119 DPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPH 178
DPLPSYGRG +LPG+R++SLI G L DV++TG NG+IDGQG++WW WF + +LNY+RPH
Sbjct: 121 DPLPSYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSIDGQGAIWWGWFHNHTLNYTRPH 180
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
LVE + S NVV+SNLTF N+P +NIHPVYCS V ++++++ AP SP T G+ PDSS NV
Sbjct: 181 LVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVRHVTILAPLNSPNTDGVTPDSSTNV 240
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
CI C + G D I +KSGWDEYGI++ +P++++ I + ++ GS +AFGSEMSGGIS
Sbjct: 241 CINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEMSGGIS 300
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD 358
V+ + + +SL+GI +T GRGGY+ + I+D + N+++A GN G HPDD +D
Sbjct: 301 EVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHPDDKYD 360
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIH 418
ALP I IT KD++G NI +AG GIQ F+NICLSN+SLS+ S + W CS I
Sbjct: 361 STALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQ--SAHPWNCSLIE 418
Query: 419 GSSESVFPEPC 429
G S SV PE C
Sbjct: 419 GYSNSVIPESC 429
>gi|356533489|ref|XP_003535296.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 247/441 (56%), Positives = 323/441 (73%), Gaps = 7/441 (1%)
Query: 7 LLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFY 66
L+L L CS + S C+ + + RPHSVSITEFGAVGDG TLNT+AFQNAIFY
Sbjct: 20 LVLALFSCSTWTV---WSSSCCNQINSYEVRPHSVSITEFGAVGDGITLNTIAFQNAIFY 76
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
L SFADKGGA+L+VP+G+WLTGSF+L SHLTL+L+ AVILGS N W VVDPLPSYG
Sbjct: 77 LNSFADKGGAKLFVPAGRWLTGSFDLISHLTLWLDNDAVILGSMNSDDWPVVDPLPSYGH 136
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSE 186
G ELPG R++SLI G L DVV+TG+NGTIDGQGS+WW+ F +++LNY+RPHLVE ++S
Sbjct: 137 GRELPGGRHRSLIYGRNLTDVVITGNNGTIDGQGSIWWNNFWNKTLNYTRPHLVELMNST 196
Query: 187 NVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIA 246
V++SN+TF+N+P + IHPVYCS+V IQN+++ AP SP T GI PDSSDNVCIEDC I+
Sbjct: 197 GVLISNVTFMNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTDGINPDSSDNVCIEDCYIS 256
Query: 247 MGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIH 306
G D IS+KSGWD YGI++GRP+T+++IRR++ +++S + +A GSEMSGG+S V E I+
Sbjct: 257 TGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKTTS-AGIAIGSEMSGGVSEVHAEDIY 315
Query: 307 LYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAID 366
++DS + I +T+ GRGGY+R + IS+ L N+++A G G HPDD +DPDALP I+
Sbjct: 316 IFDSHSAIRIKTSPGRGGYVRNVYISNMILVNVDIAIRFTGLYGEHPDDTYDPDALPVIE 375
Query: 367 QITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFP 426
+IT KD+IG + AG GI+ F NICLSNI+L+++ W CS + G S+ V P
Sbjct: 376 RITIKDVIGEKVKRAGLIQGIKGDNFVNICLSNITLNVSKKL--PWNCSYVKGYSDLVSP 433
Query: 427 EPC-PELENSSSNSSSTCFSL 446
E C P E S C+ L
Sbjct: 434 EACEPLRERIFPEHCSDCYYL 454
>gi|224130826|ref|XP_002320934.1| predicted protein [Populus trichocarpa]
gi|222861707|gb|EEE99249.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 233/399 (58%), Positives = 300/399 (75%), Gaps = 3/399 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RPHSV+ITEFGAVGDG TLNT AFQNAIFYL SFADKGGA+L+VP+G+WLTGSF+L SHL
Sbjct: 32 RPHSVAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 91
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L+K A+ILGS N W V+D LPSYGRG ELPGRR+KSLI G L DV++TGDNGTI
Sbjct: 92 TLWLDKDAIILGSTNSDDWPVIDSLPSYGRGRELPGRRHKSLIYGRNLTDVIITGDNGTI 151
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQGS+WW+WF +++L+Y+RPHLVE +++ VV+SNLTFLN+P + IHPVYCS V +QN+
Sbjct: 152 DGQGSIWWNWFRNETLDYTRPHLVELMNTTGVVISNLTFLNSPFWTIHPVYCSQVIVQNV 211
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP +SP T GI PDSSD+VCIEDC I+ G D I++KSGWDEYG +Y RP+ ++ IR
Sbjct: 212 TILAPLDSPNTDGIDPDSSDDVCIEDCYISTGDDIIAIKSGWDEYGTSYARPSKNITIRG 271
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
++ Q++S + +A GSEMSGG+S V E + Y+S GI +T GRGGY+R I IS+ L
Sbjct: 272 LVGQTTS-AGIAIGSEMSGGVSEVHAENLTFYNSTTGIRIKTAPGRGGYVRNIYISNMSL 330
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
++ A G G HPD+ +DP ALP I++IT D+ G N+ AG G++ F +IC
Sbjct: 331 TDVKTAIRFTGQYGDHPDESYDPKALPLIERITIDDVTGQNVKYAGLLEGLEGDTFLDIC 390
Query: 397 LSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENS 435
LSNI+LS+ S + W CS I G SE+V PE C L +
Sbjct: 391 LSNINLSVT--SKSPWNCSYIQGYSEAVSPEICEPLRET 427
>gi|357111082|ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 479
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/426 (56%), Positives = 306/426 (71%), Gaps = 2/426 (0%)
Query: 8 LLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYL 67
LL+ +A + VS C D RPHSVSITEFGAVGDG T NT AFQNAIFYL
Sbjct: 11 LLVFTTVAAEIQWSSVSGMYCKDLTASVYRPHSVSITEFGAVGDGMTRNTKAFQNAIFYL 70
Query: 68 KSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRG 127
SFA+KGGAQL+VP+G+WLTGSF+L SHLT+ L+K AVILGS + S W V+DPLPSYGRG
Sbjct: 71 SSFANKGGAQLFVPAGRWLTGSFSLVSHLTVSLDKDAVILGSPDSSDWPVIDPLPSYGRG 130
Query: 128 IELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSEN 187
ELPG+R++SLI G L DV++TG NGTIDGQG +WW+WF + +LNY+RP LVEF+ S
Sbjct: 131 RELPGKRHQSLIFGSNLTDVIITGANGTIDGQGEIWWNWFHNHTLNYTRPPLVEFMYSTR 190
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAM 247
VVVSNLTF N+P +NIHPVYCS V +Q++++ AP SP T GI PDSS NVCIEDC I
Sbjct: 191 VVVSNLTFTNSPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSTNVCIEDCYIRN 250
Query: 248 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 307
G D + +KSGWDEYGI++ P++++ I+ + Q+ S + +A GSEMSGGISNV+ I +
Sbjct: 251 GDDIVVIKSGWDEYGISFAYPSSNISIQNITGQTRSSAGIALGSEMSGGISNVRAVGIRI 310
Query: 308 YDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQ 367
+S++GI +T GRGGY++ + I+D + N+++A N G HPDD +D +ALP I
Sbjct: 311 VNSVHGIRIKTAPGRGGYVKNVYIADVSMDNVSIAIRITANYGEHPDDKYDKNALPIISN 370
Query: 368 ITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPE 427
IT K++IG NI +AG GIQ F+NICLSN++LS S + W CS + G S SV PE
Sbjct: 371 ITIKNVIGANIGVAGMLQGIQGDSFSNICLSNVTLSTK--SMDPWNCSLVEGYSNSVSPE 428
Query: 428 PCPELE 433
C EL
Sbjct: 429 ICEELR 434
>gi|357122663|ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 475
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/435 (54%), Positives = 318/435 (73%), Gaps = 4/435 (0%)
Query: 1 MKMPVALLLLLALCSAILING--EVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTL 58
M+ ++ L + +AI+ VS C D + RPHSV+ITEFGAVGDG LNT
Sbjct: 1 MRRSASVFRALLVFTAIVETQWPGVSGIYCKDMASGVYRPHSVTITEFGAVGDGVALNTK 60
Query: 59 AFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVV 118
AFQNAIFYL SFADKGGAQL+VP+G+WLTGSF+L SHLTL L+K AVI+GS + S+W V+
Sbjct: 61 AFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHLTLSLDKDAVIIGSPDSSNWPVI 120
Query: 119 DPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPH 178
DPLPSYGRG ELPG R++SLI GY L DV++TG NGTIDGQG+VWWDWF + +LNY+RPH
Sbjct: 121 DPLPSYGRGRELPGERHQSLIFGYNLTDVIITGANGTIDGQGAVWWDWFHNHTLNYTRPH 180
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
LVE + S NVV+SNLTF N+P +NIHPVYCS V ++++++ AP +SP T GI PDSS N+
Sbjct: 181 LVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVEHLTILAPLDSPNTDGINPDSSTNI 240
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
CI+ C + G D I +KSGWDEYGI++ P++++ I + ++ G+ +A GSEMSGGIS
Sbjct: 241 CIKHCYVRNGDDVIVIKSGWDEYGISFAHPSSNISITNITGETRGGAGIAIGSEMSGGIS 300
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD 358
V+ E++ + +SL+GI +T GRGGY+R + I+D ++N+++A GN G HPD+++D
Sbjct: 301 EVRAERLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHPDNNYD 360
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIH 418
+ALP I IT ++++G N+ IAG GI+ F++IC+SN+SLS+ S + W CS I
Sbjct: 361 RNALPMISNITIENVVGINVGIAGILEGIEGDNFSSICISNVSLSVQ--SMHPWNCSLIQ 418
Query: 419 GSSESVFPEPCPELE 433
G S SV PE C +L
Sbjct: 419 GYSNSVIPESCDQLR 433
>gi|222636745|gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japonica Group]
Length = 506
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/431 (55%), Positives = 311/431 (72%), Gaps = 2/431 (0%)
Query: 5 VALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAI 64
+ +LL+ A A S C+D RPHSVSITEFGAV DG TLNT AF+NAI
Sbjct: 37 LQVLLVFATVFAATQWATSSAMYCNDLTASVHRPHSVSITEFGAVNDGVTLNTKAFKNAI 96
Query: 65 FYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSY 124
FYL SFADKGGA+L+VP+G+WLTGSFNL SHLT+ L+ AVI+GSQ+ S W V+DPLPSY
Sbjct: 97 FYLSSFADKGGAELFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQDSSDWPVIDPLPSY 156
Query: 125 GRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFIS 184
GRG ELPG+R++SLI G L DV++TG NGTIDGQG +WW+WF + +LNY+RP L+E +
Sbjct: 157 GRGRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLNYTRPPLLELMY 216
Query: 185 SENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCI 244
S+ VV+SNLTF+NAP +NIHPVYCS V +Q++++ AP SP T GI PDSS NVCIEDC
Sbjct: 217 SDRVVISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSNVCIEDCY 276
Query: 245 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 304
I G D + +KSGWDEYGI++ P++++ IR + Q+ + + +AFGSEMSGGIS+V+ E
Sbjct: 277 IRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGISDVRAEG 336
Query: 305 IHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPA 364
+ +S++GI +T GRGGY++ I I+D + N+++A GN G HPDD++D +ALP
Sbjct: 337 LRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNYDKNALPV 396
Query: 365 IDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESV 424
I IT K+++G NI AG GIQ F+NICLSN+SLS S + W CS I G S SV
Sbjct: 397 ISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSLS--SKSADPWNCSLIEGFSNSV 454
Query: 425 FPEPCPELENS 435
PE C +L S
Sbjct: 455 APEICEQLRPS 465
>gi|297816204|ref|XP_002875985.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321823|gb|EFH52244.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/413 (56%), Positives = 305/413 (73%), Gaps = 3/413 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RPHSVSITEFGAVGDG TLNT AFQNA+FY SF+DKGGA+L+VP+G+WLTGSF+L SHL
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNALFYPNSFSDKGGAKLFVPAGQWLTGSFDLISHL 98
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L+ GA ILGS + +W VVDPLPSYGRG ELPGRR++SLI G L DVV+TG+NGTI
Sbjct: 99 TLWLDSGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTI 158
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQGSVWWDWF + LNY+RPHLVE ++S +++SNLTFLN+P +NIHPVYC +V ++N+
Sbjct: 159 DGQGSVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNL 218
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP ESP T G+ PDSS NVCIEDC I D +S+K+GWDEYGI+Y RP++ + I R
Sbjct: 219 TILAPLESPNTDGVDPDSSTNVCIEDCYIVTRDDLVSIKTGWDEYGISYARPSSKIKINR 278
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ Q++S S +A GSEMSGG+S + ++ +HL++S GI +T+ GRGGY+R + I + +L
Sbjct: 279 LTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKL 338
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
N+ A G G HPD +FDP ALPAI++ITF+++ G I +AG GI+ F NIC
Sbjct: 339 DNVKKAIRFTGKYGEHPDKNFDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDEFKNIC 398
Query: 397 LSNISLSINPGSYNS-WECSNIHGSSESVFPE-PCPELENS-SSNSSSTCFSL 446
N++L + S S WECSN+ G S+ V P C L+ S S CF L
Sbjct: 399 FLNVTLRVKKNSKKSPWECSNVRGYSQWVSPGITCDSLKESIFPEHRSDCFGL 451
>gi|218199365|gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indica Group]
Length = 506
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/431 (54%), Positives = 310/431 (71%), Gaps = 2/431 (0%)
Query: 5 VALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAI 64
+ +LL+ A A S C+D RPHSVSITEFGAV DG TLNT AF+NAI
Sbjct: 37 LQVLLVFATVFAATQWATSSAMYCNDLTASVHRPHSVSITEFGAVNDGVTLNTKAFKNAI 96
Query: 65 FYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSY 124
FYL SFADKGGA+L+VP+G+WLTGSFNL SHLT+ L+ AVI+GSQ+ S W V+DPLPSY
Sbjct: 97 FYLSSFADKGGAELFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQDSSDWPVIDPLPSY 156
Query: 125 GRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFIS 184
GRG ELPG+R++SLI G L DV++TG NGTIDGQG +WW+WF + +LNY+RP L+E +
Sbjct: 157 GRGRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLNYTRPPLLELMY 216
Query: 185 SENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCI 244
S+ VV+SNLTF+NAP +NIHPVYCS V +Q++++ AP SP T GI PDSS NVCIEDC
Sbjct: 217 SDRVVISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSNVCIEDCY 276
Query: 245 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 304
I G D + +KSGWDEYGI++ P++++ IR + Q+ + + +AFGSEMSGGIS+V+ E
Sbjct: 277 IRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGISDVRAEG 336
Query: 305 IHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPA 364
+ +S++GI +T GRGGY++ I I+D + N+++A GN G HPDD++D + LP
Sbjct: 337 LRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNYDKNVLPV 396
Query: 365 IDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESV 424
I IT K+++G NI AG GIQ F+NICLSN+SLS S + W CS + G S SV
Sbjct: 397 ISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSLS--SKSADPWNCSLVKGFSNSV 454
Query: 425 FPEPCPELENS 435
PE C +L S
Sbjct: 455 APEICEQLRPS 465
>gi|242043478|ref|XP_002459610.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
gi|241922987|gb|EER96131.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
Length = 499
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/408 (56%), Positives = 299/408 (73%), Gaps = 2/408 (0%)
Query: 28 CDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLT 87
C+D RPHS SIT+FGAVGDG TLNT AFQNA+FYL SFA KGGAQL+VP+G+WLT
Sbjct: 47 CEDLTASVERPHSASITDFGAVGDGATLNTKAFQNALFYLNSFAKKGGAQLFVPAGRWLT 106
Query: 88 GSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDV 147
GSF+L SHLTL L+K AVILGS + S W V+D LPSYGRG ELPG+R++SLI G L DV
Sbjct: 107 GSFSLISHLTLSLDKDAVILGSTDSSDWPVIDALPSYGRGRELPGKRHQSLIFGSNLTDV 166
Query: 148 VVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
++TG NGTIDGQG+VWWDWF + +LNY+RP LVE + S VV+SNLTF+N+P +NIHPVY
Sbjct: 167 IITGSNGTIDGQGAVWWDWFHNHTLNYTRPPLVELMYSTRVVISNLTFINSPFWNIHPVY 226
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
CS V Q++++ AP SP T GI PDSS NVCIEDC I G D + +KSGWDEYGI++
Sbjct: 227 CSQVLAQHLTILAPISSPNTDGIDPDSSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAH 286
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
P++++ IR + Q+ + + +AFGSEMSGGIS+V+ E I + +S++GI +T GRGGY++
Sbjct: 287 PSSNISIRNITGQTRNSAGLAFGSEMSGGISDVRAEGIRIVNSVHGIRIKTAPGRGGYVK 346
Query: 328 QIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGI 387
+ ++D N+++A GN G HPDD ++ ALP I IT KD++G NI +AG GI
Sbjct: 347 NVYVADVSFDNVSIAIRITGNYGEHPDDRYNKSALPTISNITIKDVVGVNIGVAGMLQGI 406
Query: 388 QEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENS 435
F+NICLSN+SLS+ S + W CS + G S SV PE C +L S
Sbjct: 407 PGDNFSNICLSNVSLSVR--STDPWNCSLVEGYSNSVSPEVCEQLRTS 452
>gi|115456423|ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|40714685|gb|AAR88591.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711938|gb|ABF99733.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108711939|gb|ABF99734.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550283|dbj|BAF13726.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|215694675|dbj|BAG89866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 239/435 (54%), Positives = 315/435 (72%), Gaps = 4/435 (0%)
Query: 1 MKMPVALL-LLLALCSAILIN-GEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTL 58
M+ +LL +LL + + VS C D + RPHSV+ITEFGAVGDG TLNT
Sbjct: 1 MRRSASLLRVLLVFITMVGTQWSNVSSTYCKDMASSVYRPHSVTITEFGAVGDGVTLNTK 60
Query: 59 AFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVV 118
AFQNAIFYL SFADKGGAQL+VP+G+WLTGSF+L SHLTL L+K A I+GS + S W V+
Sbjct: 61 AFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHLTLSLDKDAEIIGSPDSSDWPVI 120
Query: 119 DPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPH 178
DPLPSYGRG ELPG+R++SLI G L DV++TG NGTIDGQG++WWDWF S +LNY+RPH
Sbjct: 121 DPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTIDGQGAIWWDWFHSNTLNYTRPH 180
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
LVE + S +VV+SNLTF N+P +NIHPVYCS V +Q++++ AP SP T GI PDSS NV
Sbjct: 181 LVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGIDPDSSTNV 240
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
CI+ C + G D I +KSGWDEYGI++ RP+T++ I + ++ G+ +AFGSEMSGGIS
Sbjct: 241 CIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISNITGETRGGAGIAFGSEMSGGIS 300
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD 358
V+ E + + +S++GI +T GRGGY++ + ISD + N+++A GN G HPDD +D
Sbjct: 301 EVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSMDNVSMAIRITGNFGEHPDDKYD 360
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIH 418
+ALP I IT ++++G N+ +AG GI+ F++ICLSN+SLS+ S + W CS I
Sbjct: 361 RNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSICLSNVSLSVQ--SMHPWNCSLIE 418
Query: 419 GSSESVFPEPCPELE 433
G S SV PE C +L
Sbjct: 419 GYSNSVIPESCEQLR 433
>gi|302809176|ref|XP_002986281.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
gi|300145817|gb|EFJ12490.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
Length = 445
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/395 (58%), Positives = 300/395 (75%), Gaps = 2/395 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RPHSVSITEFGAVGDG+T+NT+AFQNA+FYL+SFA KGGAQLYVP+G+WLTGSF L SHL
Sbjct: 32 RPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWLTGSFTLISHL 91
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL+ G+VIL SQ+P W ++DPLPSYGRG +LPGRR++SL+ G + DVV+TG NGTI
Sbjct: 92 TLFLDTGSVILASQDPHDWPLIDPLPSYGRGRDLPGRRHRSLVYGKDVEDVVITGGNGTI 151
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQGSVWW WF +QSLNY+R HLVEFI+S+N+VVSN++ LN+P++ IHPVYCSNV I+ +
Sbjct: 152 DGQGSVWWHWFRNQSLNYTRGHLVEFINSKNIVVSNISLLNSPSWTIHPVYCSNVVIRGV 211
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+V AP ESP T G+ PDS VCIEDC I G DA+S+KSGWDEYGI G P+ V IRR
Sbjct: 212 TVVAPSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIQVGLPSAKVVIRR 271
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ Q+ + +++AFGSEMSGGI NV VE + +++S G+ +T GRGGY++ I +++ +
Sbjct: 272 ITAQAPASAAIAFGSEMSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTM 331
Query: 337 YNINVAFGACGNCGS-HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
++ A GN S HPD+ +DP A P + I + G NI+ AG+ G++ APF +I
Sbjct: 332 DSVLTAIALSGNSSSEHPDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDI 391
Query: 396 CLSNISLSINPGSYNS-WECSNIHGSSESVFPEPC 429
CLSNI+L ++ S S W+CSN+ G+S V P PC
Sbjct: 392 CLSNITLEVDEASQGSKWDCSNVKGASLGVTPTPC 426
>gi|108711940|gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|218194041|gb|EEC76468.1| hypothetical protein OsI_14200 [Oryza sativa Indica Group]
gi|222626115|gb|EEE60247.1| hypothetical protein OsJ_13254 [Oryza sativa Japonica Group]
Length = 460
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/411 (56%), Positives = 305/411 (74%), Gaps = 2/411 (0%)
Query: 23 VSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPS 82
VS C D + RPHSV+ITEFGAVGDG TLNT AFQNAIFYL SFADKGGAQL+VP+
Sbjct: 9 VSSTYCKDMASSVYRPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPA 68
Query: 83 GKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGY 142
G+WLTGSF+L SHLTL L+K A I+GS + S W V+DPLPSYGRG ELPG+R++SLI G
Sbjct: 69 GRWLTGSFSLISHLTLSLDKDAEIIGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGT 128
Query: 143 MLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYN 202
L DV++TG NGTIDGQG++WWDWF S +LNY+RPHLVE + S +VV+SNLTF N+P +N
Sbjct: 129 NLTDVIITGANGTIDGQGAIWWDWFHSNTLNYTRPHLVELMYSTDVVISNLTFKNSPFWN 188
Query: 203 IHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYG 262
IHPVYCS V +Q++++ AP SP T GI PDSS NVCI+ C + G D I +KSGWDEYG
Sbjct: 189 IHPVYCSQVLVQHVTILAPLNSPNTDGIDPDSSTNVCIDHCYVRNGDDVIVIKSGWDEYG 248
Query: 263 IAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGR 322
I++ RP+T++ I + ++ G+ +AFGSEMSGGIS V+ E + + +S++GI +T GR
Sbjct: 249 ISFARPSTNISISNITGETRGGAGIAFGSEMSGGISEVRAEGLRIVNSMHGIRIKTAPGR 308
Query: 323 GGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAG 382
GGY++ + ISD + N+++A GN G HPDD +D +ALP I IT ++++G N+ +AG
Sbjct: 309 GGYVKNVYISDVSMDNVSMAIRITGNFGEHPDDKYDRNALPMISNITIENVVGVNVGVAG 368
Query: 383 NFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELE 433
GI+ F++ICLSN+SLS+ S + W CS I G S SV PE C +L
Sbjct: 369 ILEGIEGDNFSSICLSNVSLSVQ--SMHPWNCSLIEGYSNSVIPESCEQLR 417
>gi|302814173|ref|XP_002988771.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
gi|300143592|gb|EFJ10282.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
Length = 445
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/395 (58%), Positives = 300/395 (75%), Gaps = 2/395 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RPHSVSITEFGAVGDG+T+NT+AFQNA+FYL+SFA KGGAQLYVP+G+WLTGSF L SHL
Sbjct: 32 RPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWLTGSFTLISHL 91
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL+ G+VIL SQ+P W ++DPLPSYGRG +LPGRR++SL+ G L DVV+TG NGTI
Sbjct: 92 TLFLDTGSVILASQDPHDWPLIDPLPSYGRGRDLPGRRHRSLVYGKDLEDVVITGGNGTI 151
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQGSVWW WF +QSLNY+R HLVEFI+S+N+VVSN++ LN+P++ IHPVYCSNV I+ +
Sbjct: 152 DGQGSVWWHWFRNQSLNYTRGHLVEFINSKNIVVSNISLLNSPSWTIHPVYCSNVVIRGV 211
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+V AP ESP T G+ PDS VCIEDC I G DA+S+KSGWDEYGI G P+ V IRR
Sbjct: 212 TVVAPSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIRVGLPSAKVVIRR 271
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ Q+ + +++AFGSEMSGGI NV VE + +++S G+ +T GRGGY++ I +++ +
Sbjct: 272 ITAQAPASAAIAFGSEMSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTM 331
Query: 337 YNINVAFGACGNCGS-HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
++ A GN S HPD+ +DP A P + I + G NI+ AG+ G++ APF +I
Sbjct: 332 DSVLTAIALSGNSSSEHPDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDI 391
Query: 396 CLSNISLSINPGSYNS-WECSNIHGSSESVFPEPC 429
CLSNI+L ++ S S W+CSN+ G+S V P PC
Sbjct: 392 CLSNITLEVDDASQGSKWDCSNVKGASLGVTPTPC 426
>gi|308080756|ref|NP_001183080.1| uncharacterized protein LOC100501436 precursor [Zea mays]
gi|238009236|gb|ACR35653.1| unknown [Zea mays]
gi|414884141|tpg|DAA60155.1| TPA: hypothetical protein ZEAMMB73_186239 [Zea mays]
Length = 490
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/406 (55%), Positives = 298/406 (73%), Gaps = 2/406 (0%)
Query: 28 CDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLT 87
C+D RPH S+T+FGAVGDG TLNT AFQNA+F+L SFA KGGAQL+VP+G+WLT
Sbjct: 40 CEDLTASVERPHRASVTDFGAVGDGATLNTKAFQNALFHLDSFAKKGGAQLFVPAGRWLT 99
Query: 88 GSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDV 147
GSF+L SHLTL L+K AVILGS + S W V+D LPSYGRG ELPG+R++SLI G L DV
Sbjct: 100 GSFSLISHLTLSLDKDAVILGSPDSSDWPVIDALPSYGRGRELPGKRHQSLIFGSNLTDV 159
Query: 148 VVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
++TG NGT+DGQG+VWWDWF + +LNY+RP LVE + S VV+SNLTF+N+P +NIHPVY
Sbjct: 160 IITGANGTVDGQGAVWWDWFHNHTLNYTRPPLVELMYSTRVVISNLTFINSPFWNIHPVY 219
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
CS V +Q++++ AP SP T GI PDSS NVCIEDC + G D I +KSGWDEYGI++
Sbjct: 220 CSQVLVQHLTILAPISSPNTDGIDPDSSTNVCIEDCYVRNGDDIIVIKSGWDEYGISFAH 279
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
P++++ IR + Q+ + + +AFGSEMSGGIS+V+ E + + +S++GI +T GRGGY++
Sbjct: 280 PSSNISIRNITGQTRNSAGLAFGSEMSGGISDVRAEGVRIVNSVHGIRIKTAPGRGGYVK 339
Query: 328 QIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGI 387
+ ++D N+++A GN G HPDD +D +ALP I IT KD++G NI +AG GI
Sbjct: 340 NVYVADVSFDNVSIAIRITGNYGEHPDDGYDRNALPTISNITIKDVVGVNIGVAGMLQGI 399
Query: 388 QEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELE 433
F+ ICLSN+SLS+ S + W CS + G S SV PE C +L
Sbjct: 400 PGDSFSGICLSNVSLSVR--STDPWNCSLVEGYSSSVSPEVCEQLR 443
>gi|302758838|ref|XP_002962842.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
gi|300169703|gb|EFJ36305.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
Length = 439
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/409 (54%), Positives = 294/409 (71%), Gaps = 5/409 (1%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFA--DKGGAQLYVPSGKWLTGSFNLTS 94
RPHS SI +FGA+GDG TLNTLAFQNA+FYL S DKGGA LYVP G+WLTGSFNLTS
Sbjct: 25 RPHSASIVDFGAIGDGVTLNTLAFQNAMFYLSSITATDKGGAMLYVPEGRWLTGSFNLTS 84
Query: 95 HLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
H TL+LE+GAVILGSQ+PS W ++DPLPSYGRG ELPG R+ SL++G L DVV+TG+NG
Sbjct: 85 HFTLYLERGAVILGSQDPSQWPIIDPLPSYGRGRELPGGRHISLVHGENLEDVVITGENG 144
Query: 155 TIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
TIDGQG+ WW W LN++R HLVEF+SS N+++SN+T +N+P + +HPVYC+NV IQ
Sbjct: 145 TIDGQGAKWWRWSKLGLLNHTRGHLVEFVSSTNIIISNVTLVNSPFWTLHPVYCTNVLIQ 204
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
+++ AP +SP T GI PDSS NVCI+DC I+ G D I++KSGWDEYGIAYG+P++++HI
Sbjct: 205 GVTILAPQDSPNTDGIDPDSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSNIHI 264
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
RRV Q+ G+++A GSE SGGI NV VE + + +G+ RT GRG YIR +V+S
Sbjct: 265 RRVTGQTKRGAAIAIGSETSGGIENVLVEDLVAVSTKSGVSIRTGVGRGAYIRNVVLSSI 324
Query: 335 ELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFAN 394
L +I A G HPD+ ++ A P ++++T + + G + G GI E PF +
Sbjct: 325 TLLDIQTAITISGFSSEHPDNGYNATAFPVVEKVTVRGVTGNTLDRPGRILGIPEVPFRD 384
Query: 395 ICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
ICL +I+L + G +W+C+++ G S SV P+ C EL S +NS C
Sbjct: 385 ICLEDIALDASTG-LTAWKCTDVEGYSSSVTPKICKEL--SENNSPDAC 430
>gi|302815490|ref|XP_002989426.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
gi|300142820|gb|EFJ09517.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
Length = 439
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/406 (54%), Positives = 294/406 (72%), Gaps = 4/406 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFA--DKGGAQLYVPSGKWLTGSFNLTS 94
RPHS SI +FGA+GDG TLNTLAFQNA+FYL S DKGGA LYVP G+WLTGSFNLTS
Sbjct: 25 RPHSASIVDFGAIGDGVTLNTLAFQNAMFYLSSITATDKGGAMLYVPEGRWLTGSFNLTS 84
Query: 95 HLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
H TL+LE+GAVILGSQ+PS W ++DPLPSYGRG ELPG R+ SL++G L DVV+TG+NG
Sbjct: 85 HFTLYLERGAVILGSQDPSQWPIIDPLPSYGRGRELPGGRHISLVHGENLEDVVITGENG 144
Query: 155 TIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
TIDGQG+ WW W LN++R HLVEF+SS N+++SN+T +N+P + +HPVYC+NV IQ
Sbjct: 145 TIDGQGAKWWRWSKLGLLNHTRGHLVEFVSSTNIIISNVTLVNSPFWTLHPVYCTNVLIQ 204
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
+++ AP +SP T GI PDSS NVCI+DC I+ G D I++KSGWDEYGIAYG+P++++HI
Sbjct: 205 GVTILAPQDSPNTDGIDPDSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSNIHI 264
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
RRV Q+ G+++A GSE SGGI NV VE + + +GI RT GRG YIR +V+S
Sbjct: 265 RRVTGQTKRGAAIAIGSETSGGIENVLVEDLVAVSTKSGISIRTGVGRGAYIRNVVLSSI 324
Query: 335 ELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFAN 394
L +I A G HPD+ F+ A P ++++T + + G + G GI E PF +
Sbjct: 325 TLLDIQTAITISGFSSEHPDNGFNATAFPVVEKVTVRGVTGNTLDRPGRILGIPEVPFRD 384
Query: 395 ICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPEL-ENSSSNS 439
ICL +I+L G +W+C+++ G S SV P+ C +L EN++ ++
Sbjct: 385 ICLEDIALDATTG-LTAWKCTDVEGYSSSVTPKICSQLSENNTPDA 429
>gi|168058134|ref|XP_001781065.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667462|gb|EDQ54091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/396 (54%), Positives = 299/396 (75%), Gaps = 1/396 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RPHSVSI+EFGAVGDGKTLNT AF+NA+FYL+++ADKGG QLY+P+G+WLTGS L SHL
Sbjct: 45 RPHSVSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGSIKLISHL 104
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFLE A ILGSQ+ + + V+ LPSYGRG ELPG R++SLING L DVV+TGDNGTI
Sbjct: 105 TLFLENEATILGSQDLNDYPVIPGLPSYGRGRELPGPRHRSLINGEGLEDVVITGDNGTI 164
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG+VWW+ F +++L+Y+R HLVE I S+++++SNLTF ++P + IHPVYC NV ++++
Sbjct: 165 DGQGAVWWNAFQNKTLDYTRGHLVELIDSKDILISNLTFRDSPFWTIHPVYCRNVVVKDM 224
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI PDSS VCIEDC I++G DAI++KSGWDEYG AYG P+ + IRR
Sbjct: 225 TLLAPLNSPNTDGIDPDSSQYVCIEDCYISVGDDAIAIKSGWDEYGTAYGMPSQHIDIRR 284
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+++ S + + +AFGSEMSGGIS+V+V+ + ++ + GI F+T GRGGYIR I + + +
Sbjct: 285 IVVHSETSAGIAFGSEMSGGISDVKVDHMMIFGARWGIRFKTGPGRGGYIRNITVDNVNM 344
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
++N A GN G HPD++++ P I+ + ++I+G +IT AG F G+ E+PF NI
Sbjct: 345 RSVNTAIAFTGNYGEHPDENWNRTDYPVIENVLIENIVGEDITHAGLFLGLPESPFLNIH 404
Query: 397 LSNISLSINPGSYNSWECSNIHGSSESVFPEPCPEL 432
L+NI+L S W CS++ G+ V+P+PCP+
Sbjct: 405 LANIALDTKSES-EDWNCSSVAGTYFFVWPQPCPDF 439
>gi|326521404|dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/453 (52%), Positives = 317/453 (69%), Gaps = 8/453 (1%)
Query: 6 ALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIF 65
ALL+ L + VS C D + RPHSV+ITEFGAVGDG TLNT AFQNAIF
Sbjct: 10 ALLVFLTIVETQW--SSVSGMYCADMASTVYRPHSVTITEFGAVGDGVTLNTKAFQNAIF 67
Query: 66 YLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYG 125
YL SFADKGGAQL+VP+G+WLTG FNL SHLTL L+K AVI+GS + S W V+DPLPSYG
Sbjct: 68 YLNSFADKGGAQLFVPAGRWLTGGFNLISHLTLSLDKDAVIIGSPHSSDWPVIDPLPSYG 127
Query: 126 RGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISS 185
RG ELPG R++SLI G L DV++TG NGTIDGQG+ WWDWF + +LNY+RPHLVE + S
Sbjct: 128 RGRELPGGRHQSLIFGSNLTDVIITGANGTIDGQGAYWWDWFHNHTLNYTRPHLVELMYS 187
Query: 186 ENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCII 245
+VV+SNLTF N+P +NIHPVYCS V ++++++ AP +SP T GI PDSS NVCI C +
Sbjct: 188 TSVVISNLTFKNSPFWNIHPVYCSQVIVEHVTILAPLDSPNTDGINPDSSTNVCISHCYV 247
Query: 246 AMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKI 305
G D I +KSGWDEYGI++ + ++++ I + ++ G+ +A GSEMSGGIS V+ E +
Sbjct: 248 RNGDDVIVIKSGWDEYGISFAQSSSNISISNITGETGGGAGIAIGSEMSGGISEVRAEGL 307
Query: 306 HLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAI 365
+ +SL+GI +T GRGGY+R + I+D ++N+++A GN G HPD +D +ALP I
Sbjct: 308 RIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHPDSKYDKNALPII 367
Query: 366 DQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVF 425
IT ++++G ++ +AG GI+ F++IC+SN+SLS+ P W CS I G S SV
Sbjct: 368 SNITIENVVGIDVGVAGILEGIEGDNFSSICISNVSLSVRP--RYPWNCSRIQGYSNSVT 425
Query: 426 PEPCPELENSSSNSSSTCF---SLIRYYGRASF 455
PE C +L+ + + C+ S + + RAS
Sbjct: 426 PESCEQLK-TDCEETPICYNGGSSLAFRSRASI 457
>gi|168005670|ref|XP_001755533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693240|gb|EDQ79593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/394 (54%), Positives = 300/394 (76%), Gaps = 2/394 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RPHSVSI+EFGAVGDGKTLNT AF+NA+FYL+++ADKGG QLY+P+G+WLTGS L SHL
Sbjct: 1 RPHSVSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGSIKLISHL 60
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG-DNGT 155
TLFLE A ILGSQ+ + ++ LPSYGRG ELPG R+ SLING L DVV+TG DNGT
Sbjct: 61 TLFLENEATILGSQDLKDYPIIPGLPSYGRGRELPGPRHSSLINGEGLEDVVITGSDNGT 120
Query: 156 IDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
IDGQG+VWWD F +++L+Y+R HLVE I S ++++SNLTF ++P + IHPVYC NV +++
Sbjct: 121 IDGQGAVWWDAFYNKTLDYTRGHLVELIDSSDILISNLTFRDSPFWTIHPVYCRNVVVKD 180
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
+++ AP +SP T GI PDSS NVCIEDC I++GHDAI++KSGWDEYG +YG P+ + +R
Sbjct: 181 MTILAPLDSPNTDGIDPDSSHNVCIEDCYISVGHDAIAIKSGWDEYGTSYGMPSKHIDVR 240
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
R+ + S + + +AFGSEMSGGIS+V+V+ + ++ + GI F+T GRGGYIR + + + +
Sbjct: 241 RITVHSKTSAGIAFGSEMSGGISDVKVDHMMIFGARWGIRFKTGLGRGGYIRNVTVDNVD 300
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
++++ A GN G HPD++++ P I+ I+ ++++G NIT AG F G+ E+PF NI
Sbjct: 301 MHSVGTAIAFTGNYGEHPDENWNRTDYPVIENISIENVVGENITHAGLFLGLPESPFHNI 360
Query: 396 CLSNISLSINPGSYNSWECSNIHGSSESVFPEPC 429
L+NI+L + S + W CS++ G+ V+P+PC
Sbjct: 361 HLANIALDVKSES-DDWNCSSVAGTYFFVWPQPC 393
>gi|326496208|dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/453 (52%), Positives = 317/453 (69%), Gaps = 8/453 (1%)
Query: 6 ALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIF 65
ALL+ L + VS C D + RPHSV+ITEFGAVGDG TLNT AFQNAIF
Sbjct: 10 ALLVFLTIVETQW--SSVSGMYCADMASTVYRPHSVTITEFGAVGDGVTLNTKAFQNAIF 67
Query: 66 YLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYG 125
YL SFADKGGAQL+VP+G+WLTG FNL SHLTL L+K AVI+GS + S W V+DPLPSYG
Sbjct: 68 YLNSFADKGGAQLFVPAGRWLTGGFNLISHLTLSLDKDAVIIGSPHSSDWPVIDPLPSYG 127
Query: 126 RGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISS 185
RG ELPG R++SLI G L DV++TG NGTIDGQG+ WWDWF + +LNY+RPHLVE + S
Sbjct: 128 RGRELPGGRHQSLIFGSNLTDVIITGANGTIDGQGAYWWDWFHNHTLNYTRPHLVELMYS 187
Query: 186 ENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCII 245
+VV+SNLTF N+P +NIHPVYCS V ++++++ AP +SP T GI PDSS NVCI C +
Sbjct: 188 TSVVISNLTFKNSPFWNIHPVYCSQVIVEHVTILAPLDSPNTDGINPDSSTNVCISHCYV 247
Query: 246 AMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKI 305
G D I +KSGWDEYGI++ + ++++ I + ++ G+ +A GSEMSGGIS V+ E +
Sbjct: 248 RNGDDVIVIKSGWDEYGISFAQSSSNISISNITGETGGGAGIAIGSEMSGGISEVRAEGL 307
Query: 306 HLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAI 365
+ +SL+GI +T GRGGY+R + I+D ++N+++A GN G HPD +D +ALP I
Sbjct: 308 RIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHPDSKYDKNALPII 367
Query: 366 DQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVF 425
IT ++++G ++ +AG GI+ F++IC+SN+SLS+ S W CS I G S SV
Sbjct: 368 SNITIENVVGIDVGVAGILEGIEGDNFSSICISNVSLSVR--SRYPWNCSRIQGYSNSVT 425
Query: 426 PEPCPELENSSSNSSSTCF---SLIRYYGRASF 455
PE C +L+ + + C+ S + + RAS
Sbjct: 426 PESCEQLK-TDCEETPICYNGGSSLAFRSRASI 457
>gi|168053514|ref|XP_001779181.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669440|gb|EDQ56027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/393 (53%), Positives = 290/393 (73%), Gaps = 1/393 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RPHSVSIT+FGAVGDGKTLNT AF+NAIFYL+S+A GGAQLY+P G WLTGS L SHL
Sbjct: 1 RPHSVSITDFGAVGDGKTLNTHAFENAIFYLRSYAANGGAQLYIPVGLWLTGSITLISHL 60
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFLE GA ILGS++ + V+ LPSYGRG ELPG R+ SLING L DV++TGDN TI
Sbjct: 61 TLFLENGATILGSEDFFDYPVIPGLPSYGRGRELPGPRFSSLINGNGLEDVIITGDNATI 120
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG+VWW F ++LNY+R H++E I S+N+++SNLTF N+P + IHPVYC NV ++++
Sbjct: 121 DGQGAVWWSAFRKKTLNYTRGHMLELIESKNILISNLTFKNSPFWTIHPVYCKNVVVKSL 180
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ P ++P T GI PDSS +VCIEDC I++G DAIS+KSGWD++G ++ P+ + ++R
Sbjct: 181 TILNPFDAPNTDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQFGTSFAMPSKHIKVQR 240
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+L S S + ++FGSEMSGGIS+V+V+ + + + G+ +T GRGGY+R I + + L
Sbjct: 241 ILAFSRSSAGISFGSEMSGGISDVKVDGMVVTGARWGVRIKTAVGRGGYVRGISVKNIVL 300
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
++I A GN G HPD++++ A P I+ I K+I+G NI AG F G+QE+PF +I
Sbjct: 301 HSIRTAIAVMGNYGEHPDENWNRTAYPLIEDIRMKNIVGENINQAGLFLGLQESPFRDIH 360
Query: 397 LSNISLSINPGSYNSWECSNIHGSSESVFPEPC 429
L+NI+L +N + W CS++ GS VFP+PC
Sbjct: 361 LANIALQVNT-TKQIWNCSDVAGSYIFVFPQPC 392
>gi|148909907|gb|ABR18040.1| unknown [Picea sitchensis]
Length = 472
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/408 (50%), Positives = 290/408 (71%), Gaps = 1/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R SVSI EFG VGDG T+NT AF+ AI +L F++ GG QLY+P G+WLTGSFNLT H
Sbjct: 42 RAQSVSIAEFGGVGDGTTVNTEAFRKAIEHLSEFSETGGGQLYIPPGRWLTGSFNLTDHF 101
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L K AVILGSQ+ W ++ PLPSYG G + PG RY SLINGY L DVV+TGDNGTI
Sbjct: 102 TLYLHKEAVILGSQDLEDWPLIPPLPSYGMGRDAPGPRYSSLINGYNLTDVVITGDNGTI 161
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG++WW F + L +R +LVE + S+++++SNLTFLN+PA+N+HPVY SN+ IQ +
Sbjct: 162 DGQGAIWWQKFHKKILKNTRGYLVELMYSKDIIISNLTFLNSPAWNLHPVYSSNILIQYV 221
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP +SP T GI PDS V IEDC + G D +++KSGWDEYGI++G P+ + IRR
Sbjct: 222 TILAPLDSPNTDGIDPDSCSYVRIEDCYVVSGDDIVAIKSGWDEYGISFGMPSQHIVIRR 281
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
++ S + + +A GSEMSGGI +V+ E I +S GI +T+ GRGG+++ I ++ +
Sbjct: 282 LVGISPTSAIIALGSEMSGGIQDVRAEDIQAINSETGIRIKTSPGRGGFVKDIFVNRMTM 341
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
N+ AF G+ GSHPD+ +DP+ALPA+++I++ +I+ TN+++AG GI APF +IC
Sbjct: 342 VNMKWAFTMTGSYGSHPDNKYDPNALPAVERISYSNIVATNVSVAGKLDGIANAPFKDIC 401
Query: 397 LSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
L+N+++++ S W C+ IHG S +V+P+PC LE + + C
Sbjct: 402 LTNVTITMAAKSKKYPWNCTYIHGLSNAVYPQPCSLLEERPAEGDAFC 449
>gi|168006626|ref|XP_001756010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692940|gb|EDQ79295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/399 (53%), Positives = 289/399 (72%), Gaps = 4/399 (1%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RP VSIT+FGAVGDGKTLNT AF+NA+ YL S AD GAQL +P+G+WLTGS NL SHL
Sbjct: 19 RPKKVSITDFGAVGDGKTLNTKAFENALQYLHSNADSDGAQLTIPAGRWLTGSINLISHL 78
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFLE GA ILGS++ + + ++ LPSYGRG ELPG RY SLING L DV +TG+NGTI
Sbjct: 79 TLFLENGANILGSEDFNDYPIIPELPSYGRGRELPGARYSSLINGDNLEDVTITGENGTI 138
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG VWW F +++L+YSR H++E I S+++++ NLTF N+P++ IHPVYC NV I+N+
Sbjct: 139 DGQGGVWWKAFRNKTLDYSRSHVLELIGSQDILIFNLTFQNSPSWTIHPVYCKNVVIKNL 198
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+V P +SP T GI PDSS +VCIEDC I++G DAIS+KSGWD+YGI+YG P+ + IRR
Sbjct: 199 TVLNPNDSPNTDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQYGISYGMPSKHIQIRR 258
Query: 277 VLLQSSS---GSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD 333
++ S + + V+FGSEMSGGISNV+V+ + LY + G+ F+T+ GRGGYI+ + + +
Sbjct: 259 IVSASKTFGIHAGVSFGSEMSGGISNVKVDDMVLYGARWGVRFKTSPGRGGYIKHVAVHN 318
Query: 334 AELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
L+++ A N G HPDD+++ A P I+ I K+I+G NIT AG G+ E+PF
Sbjct: 319 LLLHSVKTAVAFMANYGQHPDDNWNRTAYPVIENIVIKNIVGENITQAGILQGLPESPFR 378
Query: 394 NICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPEL 432
+I L I+L + + N W CS + GS V P+PC +L
Sbjct: 379 HIHLKTIALDVR-STKNVWNCSWVSGSYFFVVPQPCADL 416
>gi|388512935|gb|AFK44529.1| unknown [Lotus japonicus]
Length = 469
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/408 (49%), Positives = 278/408 (68%), Gaps = 1/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R +S S+T+FG VGDG TLNT AF+ AI +L ++ GG+QLYVP G+WLTGSFNLTSH
Sbjct: 39 RAYSASVTDFGGVGDGTTLNTQAFRKAIEHLSQYSSNGGSQLYVPPGRWLTGSFNLTSHF 98
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLF+ K AVILGSQ+ + W V+DPLPSYGRG + G R+ SLI G L DV++TGDNGT+
Sbjct: 99 TLFIHKDAVILGSQDENEWPVIDPLPSYGRGRDTQGGRFSSLIFGTHLTDVIITGDNGTL 158
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG +WW F ++ L Y+RP+L+E + S+NV +SNLT +N+P++NIHPVYCSNV +Q I
Sbjct: 159 DGQGDLWWKKFHNKQLQYTRPYLIEIMYSDNVQISNLTLVNSPSWNIHPVYCSNVIVQGI 218
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI PDS N IEDC I G D +++KSGWDEYGI+YG PT + IRR
Sbjct: 219 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRR 278
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S + + +A GSEMSGGI +V+ E I +S +G+ +T GRGGY+R I + +
Sbjct: 279 LTCISPTSAVIALGSEMSGGIEDVRAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTM 338
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ F G+ GSH D+++DP+A+P I+ I ++D++ N+T+A GI APF IC
Sbjct: 339 KTMKWVFWMTGDYGSHADNNYDPNAIPVIENINYRDMVAENVTMAARLGGISGAPFTGIC 398
Query: 397 LSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
+SN+++ + + W C+++ G S V PEPC L + C
Sbjct: 399 ISNVTIELAKKAKKVPWTCTDVSGISSGVTPEPCELLPGQAEEKFGAC 446
>gi|388499792|gb|AFK37962.1| unknown [Lotus japonicus]
Length = 469
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/408 (49%), Positives = 277/408 (67%), Gaps = 1/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R +S S+T+FG VGDG TLNT AF+ AI +L ++ GG+QLYVP G+WLTGS NLTSH
Sbjct: 39 RAYSASVTDFGGVGDGTTLNTQAFRKAIEHLSQYSSNGGSQLYVPPGRWLTGSLNLTSHF 98
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLF+ K AVILGSQ+ + W V+DPLPSYGRG + G R+ SLI G L DV++TGDNGT+
Sbjct: 99 TLFIHKDAVILGSQDENEWPVIDPLPSYGRGRDTQGGRFSSLIFGTHLTDVIITGDNGTL 158
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG +WW F ++ L Y+RP+L+E + S+NV +SNLT +N+P++NIHPVYCSNV +Q I
Sbjct: 159 DGQGDLWWKKFHNKQLQYTRPYLIEIMYSDNVQISNLTLVNSPSWNIHPVYCSNVIVQGI 218
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI PDS N IEDC I G D +++KSGWDEYGI+YG PT + IRR
Sbjct: 219 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRR 278
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S + + +A GSEMSGGI +V+ E I +S +G+ +T GRGGY+R I + +
Sbjct: 279 LTCISPTSAVIALGSEMSGGIEDVRAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTM 338
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ F G+ GSH D+++DP+A+P I+ I ++D++ N+T+A GI APF IC
Sbjct: 339 KTMKWVFWMTGDYGSHADNNYDPNAIPVIENINYRDMVAENVTMAARLEGISGAPFTGIC 398
Query: 397 LSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
+SN+++ + + W C+++ G S V PEPC L + C
Sbjct: 399 ISNVTIELAKKAKKVPWTCTDVSGISSGVTPEPCELLPGQAEEKFGAC 446
>gi|356568425|ref|XP_003552411.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/408 (48%), Positives = 276/408 (67%), Gaps = 1/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R HS ++T+FG VGDGKT NT AFQ+AI +L +A +GG+QLYVP+GKWLTGSF+LTSH
Sbjct: 51 RAHSAALTDFGGVGDGKTSNTKAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHF 110
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L+K AV+L SQ+ + W V++PLPSYGRG + P R+ SLI G L DV+VTG+NGTI
Sbjct: 111 TLYLDKDAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFTSLIFGTNLTDVIVTGENGTI 170
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG WW F + L Y+RP+L+E + S+N+ +SNLT LN+P++N+HPVY SN+ +Q I
Sbjct: 171 DGQGEFWWQQFHRKKLKYTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGI 230
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+++AP SP T GI PDS NV IEDC I G D +++KSGWDEYGI +G PT + IRR
Sbjct: 231 TIYAPVTSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRR 290
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S +++A GSEMSGGI +V+ E I + +G+ +T GRGGY++ I + L
Sbjct: 291 LTCISPYSATIALGSEMSGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTL 350
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ + AF G+ SH D +DP+ALP I I ++D++ N+TIA F GI PF IC
Sbjct: 351 HTMKWAFKMTGDYNSHADGHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGIC 410
Query: 397 LSNISLSINPGSYNS-WECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
++N++L + + W C++I G + V P PC L + + C
Sbjct: 411 IANVTLRMAAKAKKQPWTCTDIEGMTSGVTPPPCGLLPDQGPEKITAC 458
>gi|356530050|ref|XP_003533597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/408 (48%), Positives = 274/408 (67%), Gaps = 1/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R HS S+T+FG VGDGK NT AFQ+AI +L +A +GG+QLYVP+GKWLTGSF+LTSH
Sbjct: 51 RAHSASLTDFGGVGDGKASNTKAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHF 110
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L+K AV+L SQ+ + W V++PLPSYGRG + P R+ SLI G L DV+VTG+NGTI
Sbjct: 111 TLYLDKDAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFTSLIFGTNLTDVIVTGENGTI 170
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG WW F + L Y+RP+L+E + S+N+ +SNLT LN+P++N+HPVY SN+ +Q I
Sbjct: 171 DGQGEFWWQQFHRKKLKYTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGI 230
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI PDS NV IEDC I G D +++KSGWDEYGI +G PT + IRR
Sbjct: 231 TIFAPVTSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLMIRR 290
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S +++A GSEMSGGI +V+ E I + +G+ +T GRGGY++ I + L
Sbjct: 291 LTCISPYSATIALGSEMSGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTL 350
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ + AF G+ SH D +DP+ALP I I ++D++ N+TIA F GI PF IC
Sbjct: 351 HTMKWAFKMTGDYNSHADSHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGIC 410
Query: 397 LSNISLSINPGSYNS-WECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
++N++L + + W C++I G + V P PC L + + C
Sbjct: 411 IANVTLRMAAKAKKQPWTCTDIEGMTSGVTPPPCGLLPDQGPEKITAC 458
>gi|356513351|ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 469
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/408 (50%), Positives = 270/408 (66%), Gaps = 1/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R +S S+ EFG VGDG TLNT AFQ AI +L +A GG+QLYVP GKWLTGSFNLTSH
Sbjct: 39 RAYSASLEEFGGVGDGTTLNTKAFQAAIDHLSQYASSGGSQLYVPPGKWLTGSFNLTSHF 98
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL K AVIL SQ+ + W V+DPLPSYGRG + G R+ SLI G L DV++TGDNGTI
Sbjct: 99 TLFLHKDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVIITGDNGTI 158
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG +WW F L Y+RP+L+E + S+NV +SNLT +N+P++N+HP+Y SN+ +Q I
Sbjct: 159 DGQGDLWWQKFRKGELKYTRPYLIEIMYSDNVQISNLTLVNSPSWNVHPIYSSNLVVQGI 218
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI PDS N IEDC I G D +++KSGWDEYGIAYG PT + IRR
Sbjct: 219 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 278
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S + +A GSEMSGGI +V+ E I +S +G+ +T GRGGY++ I + +
Sbjct: 279 LTCISPFSAVIALGSEMSGGIQDVRAEDIVAINSESGVRIKTAVGRGGYVKDIFVRRMTM 338
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ AF GN GSH DD++DP+ALP I I ++D++ N+T+A GI PF IC
Sbjct: 339 KTMKWAFWMTGNYGSHADDNYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGIC 398
Query: 397 LSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
+SN+++ + + W C++I G S V P PC L + C
Sbjct: 399 ISNVTIQLAKKAKKVPWTCTDIAGISSDVTPAPCGLLPDQGEEKIGAC 446
>gi|356522584|ref|XP_003529926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 498
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/451 (45%), Positives = 298/451 (66%), Gaps = 9/451 (1%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCD------DQPTLDPRPHSVSITEFGAVGDGKT 54
M++ V + L+ AL A L++ E ++ + + L+ R HS S+T+FG VGDG T
Sbjct: 25 MRVQV-IRLVCALLLATLVSSEATERKAKIVDTSFEYNALNCRAHSASLTDFGGVGDGNT 83
Query: 55 LNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSH 114
NT AFQ+AI YL +A KGGAQLYVP+GKWLTGSF++TSH TL+L K AV+L SQ+ +
Sbjct: 84 SNTKAFQSAISYLSQYASKGGAQLYVPAGKWLTGSFSMTSHFTLYLNKDAVLLASQDMNE 143
Query: 115 WDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNY 174
W V+ PLPSYGRG + P RY S I G L DV+VTGDNGTIDGQG+ WW F ++ LNY
Sbjct: 144 WPVIKPLPSYGRGRDAPAGRYTSFIFGTNLTDVIVTGDNGTIDGQGAFWWQQFYNKRLNY 203
Query: 175 SRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDS 234
+RP+L+E + S+ + +SNLTFLN+P++N+HPVY SN+ I+ +++ AP SP T GI PDS
Sbjct: 204 TRPYLIELMFSDKIQISNLTFLNSPSWNVHPVYSSNIIIKGLTIIAPVPSPNTDGINPDS 263
Query: 235 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 294
N IEDC I G D +++KSGWDE+GI +G PT + IRR+ S +++A GSEMS
Sbjct: 264 CTNTRIEDCYIVSGDDCVAVKSGWDEFGIKFGWPTKQLVIRRLTCISPQSAAIALGSEMS 323
Query: 295 GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPD 354
GGI +V+ E I + +G+ +T+ GRGGY++ I + ++ + AF GN GS+ +
Sbjct: 324 GGIQDVRAEDITAIHTESGVRIKTSIGRGGYVKDIYVRRMTMHTMKWAFWMTGNYGSYAN 383
Query: 355 DD-FDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSI-NPGSYNSW 412
+ +DP ALP I I ++D++ N+T+A GI +PF IC++N+++S+ + + W
Sbjct: 384 NSHYDPKALPEIKGINYRDVVADNVTMAATLEGISNSPFTGICIANVTISMADKANEKPW 443
Query: 413 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
C++I G + V P+PC L + TC
Sbjct: 444 TCTDIEGITSGVTPKPCNSLLDKGPEKIKTC 474
>gi|242053639|ref|XP_002455965.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
gi|241927940|gb|EES01085.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
Length = 447
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/411 (50%), Positives = 280/411 (68%), Gaps = 2/411 (0%)
Query: 32 PTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFN 91
P R VS+ FG GDG+TLNT AF A+ ++ A GGA+LYVP G WLTG FN
Sbjct: 36 PAPPRRGARVSVASFGGAGDGRTLNTAAFARAVATIERRAVPGGAELYVPPGVWLTGPFN 95
Query: 92 LTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG 151
LTS +TLFL +GAV+ +Q+ S W +++PLPSYGRG ELPG RY SLI+G L+DVV+TG
Sbjct: 96 LTSRMTLFLARGAVVRATQDTSSWPLIEPLPSYGRGRELPGGRYISLIHGSGLQDVVITG 155
Query: 152 DNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNV 211
+NGTIDGQG+ WWD + +L Y+RPHL+E +SS +++VSN+ F ++P +NIHPVYCSNV
Sbjct: 156 ENGTIDGQGTPWWDMWKKGTLLYTRPHLLELMSSSHIIVSNVVFQDSPFWNIHPVYCSNV 215
Query: 212 HIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTD 271
I+N+++ AP +SP T GI PDSS N+CIEDC I+ G DAI++KSGWDEYGIAYGRP++D
Sbjct: 216 VIRNVTILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDAIAIKSGWDEYGIAYGRPSSD 275
Query: 272 VHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVI 331
+ +RR+ SS + A GSE SGG+ NV E ++ + S GI +T GRGG+IR + +
Sbjct: 276 ITVRRI-TGSSPFAGFAVGSETSGGVENVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTV 334
Query: 332 SDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAP 391
SD L N+ G+ G+HPD+ ++ ALP +D +T K++ G NI AG GI +
Sbjct: 335 SDVTLDNVRYGLRIVGDVGNHPDERYNRSALPIVDALTIKNVQGQNIKEAGLIKGIANSA 394
Query: 392 FANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSST 442
F+ ICLSN+ L+ W+C + G + V P PC EL ++S S T
Sbjct: 395 FSRICLSNVKLT-GGAPVQPWKCEAVSGGALDVQPSPCTELTSTSGTSFCT 444
>gi|225426168|ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 480
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/408 (50%), Positives = 275/408 (67%), Gaps = 1/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R HS S+T+FG VGDG T NT AFQ AI +L FA GG+QL+VP G+WLTGSFNLTSH
Sbjct: 49 RAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTGSFNLTSHF 108
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L K AV+L SQ+ W V+DPLPSYGRG + G RY SLI G L DVV+TG+NGTI
Sbjct: 109 TLYLHKDAVLLASQDEHEWPVIDPLPSYGRGRDTQGGRYISLIFGTNLTDVVITGENGTI 168
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG++WW F L Y+RP+L+E + S+NV +S+LT +N+P++N+HPVY SNV IQ +
Sbjct: 169 DGQGALWWAKFHKGELKYTRPYLIEIMHSDNVQISSLTLVNSPSWNVHPVYSSNVIIQGL 228
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI PDS N IEDC I G D I++KSGWDEYGIAYG PT + IRR
Sbjct: 229 TITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRR 288
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S +++A GSEMSGGI +V+ E I D+ +G+ +T GRGGY++ I + +
Sbjct: 289 LTCISPFSATIALGSEMSGGIEDVRAEDILAIDTESGVRIKTAVGRGGYVKDIYVRSMIM 348
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ AF GN GSH D+++DP+ALPAI I ++D++ N+T+AG GI PF IC
Sbjct: 349 KTMKWAFWMTGNYGSHADNNYDPNALPAIQGINYRDMVAENVTMAGRLEGISGDPFTGIC 408
Query: 397 LSNISLSINPGSYNS-WECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
+SN+++ + + + W C++I G + V P+PC L + C
Sbjct: 409 ISNVTIGLAKKAKKAPWTCTDIAGITSGVVPQPCDLLPDQGPEKIVAC 456
>gi|255537567|ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
gi|223549749|gb|EEF51237.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/417 (48%), Positives = 277/417 (66%), Gaps = 1/417 (0%)
Query: 28 CDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLT 87
C + + R H S+ +FG VGDG+T NT AFQ AI +L F+ GG+QLYVP GKWLT
Sbjct: 40 CFEYAAISCRAHEASLEDFGGVGDGQTSNTKAFQAAIDHLSQFSYDGGSQLYVPPGKWLT 99
Query: 88 GSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDV 147
GSFNLTSH TLFL+K AV+L SQ+ S W V++PLPSYGRG + G RY SLI G L DV
Sbjct: 100 GSFNLTSHFTLFLDKDAVLLASQDESEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDV 159
Query: 148 VVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
V+TG NGTIDGQG +WW F + +NY+RP+L+E + S N+ +SNLT +N+P++NIHP Y
Sbjct: 160 VITGANGTIDGQGDLWWKKFHNGEINYTRPYLIEIMYSNNIQISNLTLMNSPSWNIHPTY 219
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
SNV +Q I++ AP SP T GI PDS N IEDC I G D +++KSGWDEYGI++G
Sbjct: 220 SSNVVVQGITILAPVNSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGM 279
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
PT + IRR+ S + +++A GSEMSGGI +V+ E I ++ +G+ +T+ GRGGY++
Sbjct: 280 PTKQLVIRRLTCISPTSAAIALGSEMSGGIQDVRAEDITCINTESGVRIKTSVGRGGYVK 339
Query: 328 QIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGI 387
I + ++ + F GN GSHPD+++DP+A+P I+ I ++DI+ N+T+A GI
Sbjct: 340 DIYVRKMTMHTMKWVFWMTGNYGSHPDNNYDPNAIPVIENINYRDIVAENVTMAARLEGI 399
Query: 388 QEAPFANICLSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
PF IC+SN+++ + W C++I G S V P+PC L + C
Sbjct: 400 AGDPFTGICISNVTIGLAQKPKKLQWNCTDIAGISSGVTPKPCSLLPEQEKEKIADC 456
>gi|224071986|ref|XP_002303605.1| predicted protein [Populus trichocarpa]
gi|222841037|gb|EEE78584.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/436 (46%), Positives = 287/436 (65%), Gaps = 1/436 (0%)
Query: 9 LLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLK 68
+L+ LC+ + + + S C + + R HS S+++FG VGDG T+NT AFQ AI +L
Sbjct: 12 VLVLLCTIGVESRKSSKWDCFEYAAVSCRAHSASVSDFGGVGDGTTVNTEAFQAAIDHLS 71
Query: 69 SFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGI 128
F+ +GG+ LYVP G+WLTGSFNLTS+ TL+L+K AV+L SQ+ S + +++PLPSYGRG
Sbjct: 72 QFSSEGGSLLYVPPGRWLTGSFNLTSYFTLYLDKDAVLLASQDESEYPLIEPLPSYGRGR 131
Query: 129 ELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENV 188
+ G RY SLI G L DV++TG NGTIDGQG +WW F + LN++RP+L+E + S N+
Sbjct: 132 DADGARYSSLIFGNNLTDVIITGANGTIDGQGELWWTKFRAGELNHTRPYLIEIMFSTNI 191
Query: 189 VVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMG 248
+SNLT +N+P++N+HPVYCSNV +Q +++ AP SP T GI PDS N I+DC I G
Sbjct: 192 QISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPDSCTNTKIQDCYIVSG 251
Query: 249 HDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY 308
D +++KSGWDEYGIA+G PT V IRR+ S + + +A GSEMSGGI +V+ E I
Sbjct: 252 DDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSEMSGGIEDVRAEDITAI 311
Query: 309 DSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQI 368
DS +G+ +T GRGGY++ I + L + F GN GSHPD+++DP+A+P I I
Sbjct: 312 DSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHPDNNYDPNAIPVIQNI 371
Query: 369 TFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN-SWECSNIHGSSESVFPE 427
++D++ N+T+A GI PF IC+SN+++ + W CS++ G + V P+
Sbjct: 372 NYRDVVAENVTMAARLEGIAGDPFTGICISNVTIGLARNRKKLQWNCSDVAGITSEVTPK 431
Query: 428 PCPELENSSSNSSSTC 443
PC L + C
Sbjct: 432 PCDLLSDQGPGKIGAC 447
>gi|15236625|ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7269231|emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136230|gb|AAM91193.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332659410|gb|AEE84810.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/422 (49%), Positives = 289/422 (68%), Gaps = 2/422 (0%)
Query: 24 SDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSG 83
S+ C L R +SIT+FG VGDG+T+NT AF+ AI+ ++ +GG LY+P G
Sbjct: 24 SEATCSGIVPLRYRYDKISITDFGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPG 83
Query: 84 KWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM 143
+LT SFNLTSH+TL+L KGAVI Q+ +W ++DPLPSYGRG ELPG RY S I+G
Sbjct: 84 VYLTESFNLTSHMTLYLAKGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDG 143
Query: 144 LRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNI 203
LRDVV+TG NGTIDGQG VWW+ + S++L Y+RP+L+EF S+ +++SN+ F N+P +NI
Sbjct: 144 LRDVVITGQNGTIDGQGEVWWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNI 203
Query: 204 HPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGI 263
HPVYCSNV I ++++ AP +SP T GI PDSS NVCIED I+ G D +++KSGWD+YGI
Sbjct: 204 HPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDQYGI 263
Query: 264 AYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG 323
AYGRP++++ IRR+ SS + +A GSE SGGI N+ E I L + G+ +T GRG
Sbjct: 264 AYGRPSSNITIRRI-TGSSPFAGIAIGSETSGGIKNIIAEHITLSNMGVGVNIKTNIGRG 322
Query: 324 GYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGN 383
GYI+ I ISD + G+ G HPD++++P+ALP + I K++ G N+ AG+
Sbjct: 323 GYIKNIKISDVYVDTAKYGIKIAGDTGDHPDENYNPNALPVVKGIHIKNVWGVNVRNAGS 382
Query: 384 FTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENS-SSNSSST 442
G++ +PF ICLS I+L + SY +W+CS++ G+S V P PC EL + SN S+
Sbjct: 383 IQGLKGSPFTGICLSEINLHGSLNSYKTWKCSDVSGTSLKVSPWPCSELRTTGGSNLCSS 442
Query: 443 CF 444
F
Sbjct: 443 TF 444
>gi|226504332|ref|NP_001141464.1| uncharacterized protein LOC100273574 precursor [Zea mays]
gi|194704686|gb|ACF86427.1| unknown [Zea mays]
gi|223949711|gb|ACN28939.1| unknown [Zea mays]
gi|413950643|gb|AFW83292.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
gi|413950644|gb|AFW83293.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
Length = 446
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/411 (50%), Positives = 280/411 (68%), Gaps = 2/411 (0%)
Query: 32 PTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFN 91
P R VS+ FG GDG+TLNT AF A+ ++ A GGA+LYVP G WLTG FN
Sbjct: 35 PAPPRRGARVSVASFGGAGDGRTLNTAAFARAVASIERRAAPGGAELYVPPGVWLTGPFN 94
Query: 92 LTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG 151
LTS +TLFL +GAVI +Q+ S W +++PLPSYGRG ELPG RY SLI+G L+DVV+TG
Sbjct: 95 LTSRMTLFLARGAVIRATQDTSSWPLIEPLPSYGRGRELPGGRYTSLIHGNGLQDVVITG 154
Query: 152 DNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNV 211
+NGTIDGQGS WWD + +++L Y+RPHL+E +SS +++VSN+ F ++P +NIHPVYCSNV
Sbjct: 155 ENGTIDGQGSAWWDMWKNRTLLYTRPHLLELMSSSDIIVSNVVFQDSPFWNIHPVYCSNV 214
Query: 212 HIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTD 271
I+N+++ AP +SP T GI PDSS N+CIEDC I+ G D+I++KSGWDEYGIAYGR ++
Sbjct: 215 VIRNVTILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRASSG 274
Query: 272 VHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVI 331
+ +RR+ SS + A GSE SGG+ NV E ++ ++S GI +T GRGG+IR I +
Sbjct: 275 ITVRRI-TGSSPFAGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITV 333
Query: 332 SDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAP 391
SD L N+ G+ G+HPDD ++ ALP +D +T K++ G N+ AG GI +
Sbjct: 334 SDVTLDNVRYGLRIVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSA 393
Query: 392 FANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSST 442
F+ ICLSN+ + W+C + G + V P PC EL ++S S T
Sbjct: 394 FSRICLSNVKFT-GGAPVRPWKCEAVSGGALDVQPSPCTELTSTSGTSFCT 443
>gi|356528677|ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/408 (50%), Positives = 270/408 (66%), Gaps = 1/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R +S S+ EFG VGDG TLNT AFQ AI L +A GG+QLYVP GKWLTGSFNLTSH
Sbjct: 64 RAYSASLEEFGGVGDGTTLNTKAFQAAIENLSQYAASGGSQLYVPPGKWLTGSFNLTSHF 123
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL K AVIL SQ+ + W V+DPLPSYGRG + G R+ SLI G L DV++TGDNGTI
Sbjct: 124 TLFLHKDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVIITGDNGTI 183
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG +WW F L Y+RP+LVE + S+NV +SNLT +N+P++N+HP+Y SNV +Q I
Sbjct: 184 DGQGDLWWQKFHKGELKYTRPYLVEIMYSDNVQISNLTLVNSPSWNVHPIYSSNVVVQGI 243
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI PDS + IEDC I G D +++KSGWDEYGIAYG PT + IRR
Sbjct: 244 TILAPVTSPNTDGINPDSCTDTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 303
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S +++A GSEMSGGI +++ E I ++ +G+ +T GRGGY++ I + +
Sbjct: 304 LTCISPFSAAIALGSEMSGGIQDMRAEDIVAINTESGVRIKTAVGRGGYVKDIFVRRMTM 363
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ AF GN GSH DD++DP+ALP I I ++D++ N+T+A GI PF IC
Sbjct: 364 KTMKWAFWMTGNYGSHADDNYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGIC 423
Query: 397 LSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
+SN+++ + + W C++I G S V P PC L + C
Sbjct: 424 ISNVTIQLAKKAKKVPWTCTDIAGISSDVTPAPCDLLPDQGEEKIGAC 471
>gi|186701223|gb|ACC91250.1| glycoside hydrolase family 28 protein [Arabidopsis halleri]
Length = 444
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/434 (48%), Positives = 294/434 (67%), Gaps = 2/434 (0%)
Query: 2 KMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQ 61
++ V++ L L + G+ S+ C L R +SITE+G VGDG+T+NT AF+
Sbjct: 3 RLSVSIFLFSCLAVSSSSFGD-SEATCSGIVPLRYRYDKISITEYGGVGDGRTVNTKAFR 61
Query: 62 NAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPL 121
AI+ ++ +GG LY+P G +LT SFNLTSH+TL+L KGAVI Q+ +W ++DPL
Sbjct: 62 AAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTLYLAKGAVIRAVQDTWNWPLIDPL 121
Query: 122 PSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVE 181
PSYGRG ELPG RY S I+G LRDVV+TG NGTIDGQG VWW+ + S++L Y+RP+L+E
Sbjct: 122 PSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGEVWWNMWHSRTLKYTRPNLIE 181
Query: 182 FISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIE 241
F S+ +++SN+ F N+P +NIHPVYCSNV I ++++ AP +SP T GI PDSS NVCIE
Sbjct: 182 FKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIE 241
Query: 242 DCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQ 301
D I+ G D +++KSGWDEYGIAYGRP++++ IRR+ SS + +A GSE SGGI N+
Sbjct: 242 DSYISTGDDLVAIKSGWDEYGIAYGRPSSNITIRRI-TGSSPFAGIAIGSETSGGIKNIV 300
Query: 302 VEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDA 361
E I L + G+ +T GRGGYI+ I ISD + G+ G HPD++++P+A
Sbjct: 301 AEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYIDTAKYGIKITGDTGDHPDENYNPNA 360
Query: 362 LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSS 421
LP + I K++ G N+ AG+ G++ +PF ICLS I+L + SY +W+CS++ G+S
Sbjct: 361 LPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKTWKCSDVIGTS 420
Query: 422 ESVFPEPCPELENS 435
V P PC EL +
Sbjct: 421 LKVSPWPCSELRTT 434
>gi|449530307|ref|XP_004172137.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/459 (46%), Positives = 288/459 (62%), Gaps = 16/459 (3%)
Query: 1 MKMPVALLLLLALCSAILINGEVS---------------DGQCDDQPTLDPRPHSVSITE 45
+K V +++L + A + GEV +G + + R H+ SITE
Sbjct: 11 IKAQVMKMVILGVIMAAALMGEVEGRKGKVKKGKKAKILEGNGIEYGAISCRAHTASITE 70
Query: 46 FGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
FG VGDG T NT AFQ A+ L + D GGAQLYVP+GKWLTGSFNLTSH TLFL + AV
Sbjct: 71 FGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTGSFNLTSHFTLFLHQDAV 130
Query: 106 ILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD 165
+L SQ+P+ W VV+PLPSYG G + G RY SLI G L DVV+TG+NGTIDGQG WW
Sbjct: 131 LLASQDPNEWPVVEPLPSYGHGRDTSGGRYISLIFGTNLTDVVITGNNGTIDGQGDRWWQ 190
Query: 166 WFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
F L Y+RP+L+E + S ++ +S+LT LN+PA+N+HPVY SN+ IQ I++ AP SP
Sbjct: 191 LFHQGKLKYTRPYLIELMYSSDIQISSLTLLNSPAWNVHPVYSSNILIQGITIIAPVRSP 250
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
T GI PDS NV IEDC I G D +++KSGWDEYGI++G PT + +RR+ S + +
Sbjct: 251 NTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRRLTCISPTSA 310
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA 345
+A GSEMSGGI +V+ E I DS +G+ +T GRGGY++ I + ++ + AF
Sbjct: 311 VIALGSEMSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTMHTMKWAFWM 370
Query: 346 CGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSIN 405
G+ GSH D ++DP ALP I I +KD++ N T+A GI F +IC+SN+++ +
Sbjct: 371 TGDYGSHADKNYDPHALPVIQGINYKDMVVENATMAARLEGISGDTFTDICISNVTIGLA 430
Query: 406 PGSYNS-WECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
P + W C++I G + V P PC L + +TC
Sbjct: 431 PKAKKQPWTCTDIEGITSQVTPPPCDLLPDQGEEKITTC 469
>gi|115471367|ref|NP_001059282.1| Os07g0245200 [Oryza sativa Japonica Group]
gi|34393209|dbj|BAC82923.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113610818|dbj|BAF21196.1| Os07g0245200 [Oryza sativa Japonica Group]
Length = 446
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/364 (55%), Positives = 269/364 (73%), Gaps = 2/364 (0%)
Query: 72 DKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELP 131
+KGGA+L+VP+G+WLTGSFNL SHLT+ L+ AVI+GSQ+ S W V+DPLPSYGRG ELP
Sbjct: 44 NKGGAELFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQDSSDWPVIDPLPSYGRGRELP 103
Query: 132 GRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVS 191
G+R++SLI G L DV++TG NGTIDGQG +WW+WF + +LNY+RP L+E + S+ VV+S
Sbjct: 104 GKRHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLNYTRPPLLELMYSDRVVIS 163
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
NLTF+NAP +NIHPVYCS V +Q++++ AP SP T GI PDSS NVCIEDC I G D
Sbjct: 164 NLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSNVCIEDCYIRNGDDI 223
Query: 252 ISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL 311
+ +KSGWDEYGI++ P++++ IR + Q+ + + +AFGSEMSGGIS+V+ E + +S+
Sbjct: 224 VVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGISDVRAEGLRFINSV 283
Query: 312 NGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFK 371
+GI +T GRGGY++ I I+D + N+++A GN G HPDD++D +ALP I IT K
Sbjct: 284 HGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNYDKNALPVISNITIK 343
Query: 372 DIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPE 431
+++G NI AG GIQ F+NICLSN+SLS S + W CS I G S SV PE C +
Sbjct: 344 NVVGVNIGTAGMLLGIQGDIFSNICLSNVSLS--SKSADPWNCSLIEGFSNSVAPEICEQ 401
Query: 432 LENS 435
L S
Sbjct: 402 LRPS 405
>gi|449432134|ref|XP_004133855.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/408 (50%), Positives = 271/408 (66%), Gaps = 1/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R H+ SITEFG VGDG T NT AFQ A+ L + D GGAQLYVP+GKWLTGSFNLTSH
Sbjct: 62 RAHTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTGSFNLTSHF 121
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL + AV+L SQ+P+ W VV+PLPSYG G + G RY SLI G L DVV+TG+NGTI
Sbjct: 122 TLFLHQDAVLLASQDPNEWPVVEPLPSYGHGRDTSGGRYISLIFGTNLTDVVITGNNGTI 181
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG WW F L Y+RP+L+E + S ++ +S+LT LN+PA+N+HPVY SN+ IQ I
Sbjct: 182 DGQGDRWWQLFHQGKLKYTRPYLIELMYSSDIQISSLTLLNSPAWNVHPVYSSNILIQGI 241
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI PDS NV IEDC I G D +++KSGWDEYGI++G PT + +RR
Sbjct: 242 TIIAPVRSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRR 301
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S + + +A GSEMSGGI +V+ E I DS +G+ +T GRGGY++ I + +
Sbjct: 302 LTCISPTSAVIALGSEMSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTM 361
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ + AF G+ GSH D ++DP ALP I I +KD++ N T+A GI F +IC
Sbjct: 362 HTMKWAFWMTGDYGSHADKNYDPHALPVIQGINYKDMVVENATMAARLEGISGDTFTDIC 421
Query: 397 LSNISLSINPGSYNS-WECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
+SN+++ + P + W C++I G + V P PC L + +TC
Sbjct: 422 ISNVTIGLAPKAKKQPWTCTDIEGITSQVTPPPCDLLPDQGEEKITTC 469
>gi|297799608|ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313524|gb|EFH43947.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/444 (47%), Positives = 298/444 (67%), Gaps = 3/444 (0%)
Query: 2 KMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQ 61
++ V++ L L + G+ S+ C L R +SIT++G VGDG+T+NT AF+
Sbjct: 3 RLSVSIFLFSCLAVSSSSYGD-SEATCSGIVPLRYRYDKISITDYGGVGDGRTVNTKAFR 61
Query: 62 NAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPL 121
AI+ ++ +GG LY+P G +LT SFNLTSH+T +L KGAVI Q+ +W ++DPL
Sbjct: 62 AAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTFYLAKGAVIRAVQDTWNWPLIDPL 121
Query: 122 PSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVE 181
PSYGRG ELPG RY S I+G LRDVV+TG NGTIDGQG VWW+ + S++L Y+RP+L+E
Sbjct: 122 PSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGEVWWNMWRSRTLKYTRPNLIE 181
Query: 182 FISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIE 241
F S+ +++SN+ F N+P +NIHPVYCSNV I ++++ AP +SP T GI PDSS NVCIE
Sbjct: 182 FKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIE 241
Query: 242 DCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQ 301
D I+ G D +++KSGWDEYGIAYGRP++++ IRR+ SS + +A GSE SGGI N+
Sbjct: 242 DSYISTGDDLVAIKSGWDEYGIAYGRPSSNITIRRI-TGSSPFAGIAIGSETSGGIKNIV 300
Query: 302 VEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDA 361
E I L + G+ +T GRGGYI+ I ISD + G+ G HPD++++P+A
Sbjct: 301 AEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYIDTAKYGIKIAGDTGDHPDENYNPNA 360
Query: 362 LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSS 421
LP + I K++ G N+ AG+ G++ +PF ICLS I+L + SY +W+CS++ G+S
Sbjct: 361 LPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKTWKCSDVIGTS 420
Query: 422 ESVFPEPCPELENS-SSNSSSTCF 444
V P PC EL + S S S+ F
Sbjct: 421 LKVSPWPCSELRTTGGSYSCSSTF 444
>gi|115465733|ref|NP_001056466.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|113580017|dbj|BAF18380.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|125568884|gb|EAZ10399.1| hypothetical protein OsJ_00232 [Oryza sativa Japonica Group]
Length = 448
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/407 (51%), Positives = 275/407 (67%), Gaps = 2/407 (0%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
PR +S+ FG VGDG+ LNT AF A+ ++ +GGA LYVP+G WLTG FNLTSH
Sbjct: 43 PRGAWMSVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSH 102
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
+TLFL +GAVI +Q+ S W ++DPLPSYGRG ELPG RY SLI+G L+DV +TG+NGT
Sbjct: 103 MTLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGDGLQDVFITGENGT 162
Query: 156 IDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
IDGQGSVWWD + ++L ++RPHL+E ISS +V++SN+ F ++P +NIHPVYCSNV I N
Sbjct: 163 IDGQGSVWWDMWRKRTLPFTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNVVITN 222
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
++V AP +SP T GI PDSS NVCIED I+ G D IS+KSGWDEYGIA+GRP++ + IR
Sbjct: 223 VTVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIR 282
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
R+ S + A GSE SGG+ NV VE ++ + GI +T GRGG+IR I +S+
Sbjct: 283 RI-TGSGPFAGFAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVT 341
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
L G+ G HPD +DP LP +D +T K++ G NI AG GI+++ F+ I
Sbjct: 342 LNGARYGLRIAGDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRI 401
Query: 396 CLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSST 442
CLSN+ L S W+C + G + V P PC EL ++S S T
Sbjct: 402 CLSNVKL-YGGDSVGPWKCRAVSGGALDVQPSPCAELTSTSEMSFCT 447
>gi|168046254|ref|XP_001775589.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673007|gb|EDQ59536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/404 (49%), Positives = 284/404 (70%)
Query: 35 DPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTS 94
+ RP+S SI +FGAVGDG TLNT AF+ A+ L ++ADKGGA+LY+P+G+WLTGS L S
Sbjct: 79 ERRPYSFSIIDFGAVGDGTTLNTHAFERAMLSLSNYADKGGAELYIPAGRWLTGSIRLIS 138
Query: 95 HLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
HLTLFLE GA ILGS++ + + ++ LPSYGRG ELPG RY SLING L DV++TG+NG
Sbjct: 139 HLTLFLESGATILGSEDFNDYPLIPGLPSYGRGRELPGSRYSSLINGDGLEDVIITGNNG 198
Query: 155 TIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
TIDGQG+VWW F S++L ++R HL+E I ++++++SNLTF N+P + IHPVY NV ++
Sbjct: 199 TIDGQGAVWWSSFRSKTLEHTRGHLLELIEAQDILISNLTFQNSPFWTIHPVYSKNVVVK 258
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
+++ P SP T GI PDSS VCIEDC I++G DAIS+KSGWD+YG +G P+ + I
Sbjct: 259 RVTILNPLNSPNTDGIDPDSSQYVCIEDCYISVGDDAISIKSGWDQYGTGFGMPSKYIRI 318
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
+RV+ S + + ++FGSEMSGGIS+++V+ + + +S G+ F+T+ GRG YIR + +++
Sbjct: 319 QRVVAFSHTSAGISFGSEMSGGISDIEVDDMVITNSRWGVRFKTSVGRGAYIRNVTVNNI 378
Query: 335 ELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFAN 394
++ + A GN G HPD++++ A P I+ I +I+G NIT AG G+ +APF +
Sbjct: 379 VMHTVRTAIAVMGNYGEHPDENWNRTAYPVIENILVGNIVGENITQAGLLLGLPDAPFHD 438
Query: 395 ICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSN 438
I L+ + L W CS + G V P+PCPEL +SN
Sbjct: 439 IHLTKVVLDTRTTKQGPWNCSWVTGFYNFVLPKPCPELTMENSN 482
>gi|356520375|ref|XP_003528838.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 482
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/445 (45%), Positives = 286/445 (64%), Gaps = 2/445 (0%)
Query: 1 MKMPVALLLLLALCSAILINGEVSD-GQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLA 59
+++ A+LL+ L S + + +V G ++ R HS S+T+FG VGDGKT NT A
Sbjct: 14 IRLVCAVLLVTLLSSEVAESRKVKTVGTSFKYEAINCRTHSASLTDFGGVGDGKTSNTKA 73
Query: 60 FQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVD 119
FQ+AI +L +A KGGAQLYVP+GKWLTGSF+L SH TL+L K AV+L SQ+ S W ++
Sbjct: 74 FQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTLYLNKDAVLLASQDISEWPAIE 133
Query: 120 PLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHL 179
PLPSYGRG + P RY SLI G L DV+VTG NGTIDGQG+ WW F + L Y+RP+L
Sbjct: 134 PLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGGNGTIDGQGAFWWQKFHKKKLKYTRPYL 193
Query: 180 VEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVC 239
+E + S+ + +SNLT LN+P++N+HPVY SN+ I+ +++ AP SP T GI PDS N
Sbjct: 194 IELMFSDQIQISNLTLLNSPSWNLHPVYSSNIIIKGLTIIAPVPSPNTDGINPDSCTNTR 253
Query: 240 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 299
IEDC I G D +++KSGWDEYGI +G PT + IRR+ S +++A GSEMSGGI +
Sbjct: 254 IEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPQSAAIALGSEMSGGIQD 313
Query: 300 VQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP 359
V+ E I + +G+ +T GRGGY++ I + ++ + F GN GSH D +DP
Sbjct: 314 VRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSHADSHYDP 373
Query: 360 DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNS-WECSNIH 418
ALP I+ I ++D++ N+T+A GI PF IC++N+++ + + W C++I
Sbjct: 374 KALPEINGINYRDVVADNVTMAARLEGISNDPFTGICIANVTIGMAAKAKKQPWTCTDIE 433
Query: 419 GSSESVFPEPCPELENSSSNSSSTC 443
G + V P+PC L + C
Sbjct: 434 GITSGVTPKPCNSLPDQGPEKIKAC 458
>gi|125553514|gb|EAY99223.1| hypothetical protein OsI_21181 [Oryza sativa Indica Group]
Length = 448
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/402 (51%), Positives = 273/402 (67%), Gaps = 2/402 (0%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+S+ FG VGDG+ LNT AF A+ ++ +GGA LYVP+G WLTG FNLTSH+TLFL
Sbjct: 48 ISVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSHMTLFL 107
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+GAVI +Q+ S W ++DPLPSYGRG ELPG RY SLI+G L+DV +TG+NGTIDGQG
Sbjct: 108 ARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGDGLQDVFITGENGTIDGQG 167
Query: 161 SVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
SVWWD + ++L ++RPHL+E ISS +V++SN+ F ++P +NIHPVYCSNV I N++V A
Sbjct: 168 SVWWDMWRKRTLPFTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNVVITNVTVLA 227
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
P +SP T GI PDSS NVCIED I+ G D IS+KSGWDEYGIA+GRP++ + IRR+
Sbjct: 228 PHDSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRI-TG 286
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN 340
S + A GSE SGG+ NV VE ++ + GI +T GRGG+IR I +S+ L
Sbjct: 287 SGPFAGFAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGAR 346
Query: 341 VAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 400
G+ G HPD +DP LP +D +T K++ G NI AG GI+++ F+ ICLSN+
Sbjct: 347 YGLRIAGDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNV 406
Query: 401 SLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSST 442
L S W+C + G + V P PC EL ++S S T
Sbjct: 407 KL-YGGDSVGPWKCRAVSGGALDVQPSPCAELTSTSEMSFCT 447
>gi|356560736|ref|XP_003548644.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 479
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/445 (44%), Positives = 285/445 (64%), Gaps = 2/445 (0%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCD-DQPTLDPRPHSVSITEFGAVGDGKTLNTLA 59
+++ ALLL+ L S + + + + + ++ R HS S+ +FG VGDG T NT A
Sbjct: 14 IRLVCALLLVTLLSSEVAESRKAKTARTSFEYKAINCRAHSASLIDFGGVGDGNTSNTKA 73
Query: 60 FQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVD 119
FQ+AI +L +A KGGAQLYVP+GKWLTGSF+L SH TL+L K A +L SQ+ W V++
Sbjct: 74 FQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTLYLNKDAFLLASQDIREWPVIE 133
Query: 120 PLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHL 179
PLPSYGRG + RY SLI G L DV+VTGDNGTIDGQG+ WW F + L Y+RP+L
Sbjct: 134 PLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAFWWQKFQKKKLKYTRPYL 193
Query: 180 VEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVC 239
+E + S+ + +SNLT LN+P++N+HPVY SN+ I+ +++ AP SP T GI PDS N
Sbjct: 194 IELMFSDKIQISNLTLLNSPSWNVHPVYSSNIIIKGLTIIAPVPSPNTDGINPDSCTNTR 253
Query: 240 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 299
IEDC I G D +++KSGWDEYGI +G PT + IRR+ S +++A GSEMSGGI +
Sbjct: 254 IEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPESAAIALGSEMSGGIQD 313
Query: 300 VQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP 359
V+ E I + +G+ +T GRGGY++ I + ++ + F GN GSH D +DP
Sbjct: 314 VRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSHADSHYDP 373
Query: 360 DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNS-WECSNIH 418
+ALP I+ I ++D++ N+TIA GI PF IC++N+++++ + W C++I
Sbjct: 374 NALPEINGINYRDVVADNVTIAARLEGISNDPFTGICIANVTINMAAKAKKQPWACTDIE 433
Query: 419 GSSESVFPEPCPELENSSSNSSSTC 443
G + V P+PC L + C
Sbjct: 434 GITSGVTPKPCNSLPDQGPEKIKAC 458
>gi|357135554|ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 448
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/413 (50%), Positives = 280/413 (67%), Gaps = 6/413 (1%)
Query: 32 PTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFN 91
P R VS+ FG GDG+TLNT AF A+ ++ GG LYVP G WLTG FN
Sbjct: 37 PAPPKRGEWVSVASFGGAGDGRTLNTAAFAAAVASIERRRAPGGGLLYVPPGVWLTGPFN 96
Query: 92 LTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG 151
LTSH+TLFL +GAVI +Q+ S W ++DPLPSYGRG E+PG+RYKSLI+G L+DV +TG
Sbjct: 97 LTSHMTLFLSRGAVIRATQDTSSWPLIDPLPSYGRGREMPGKRYKSLIHGNGLQDVFITG 156
Query: 152 DNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNV 211
NGTIDGQGSVWWD + +L ++RPHL+E + S +V+VSNL F ++P +NIHPVYCSNV
Sbjct: 157 ANGTIDGQGSVWWDMWKKGTLPFTRPHLLELMDSSDVIVSNLVFRDSPFWNIHPVYCSNV 216
Query: 212 HIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTD 271
I+N+++ AP +SP T GI PDSS NVCIEDC I+ G D +++KSGWDEYGIAYGRP++D
Sbjct: 217 VIRNLTILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLVAIKSGWDEYGIAYGRPSSD 276
Query: 272 VHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVI 331
+ +RR+ SS + A GSE SGG+ NV E ++ + S G+ +T GRGG+IR + +
Sbjct: 277 ITVRRI-TGSSPFAGFAVGSETSGGVENVLAEHLNFFSSGFGVHIKTNSGRGGFIRNVTV 335
Query: 332 SDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAP 391
SD L N+ G+ G HPD+ ++ +ALP +D +T K++ G NI AG+ GI +
Sbjct: 336 SDVTLDNVRYGLRIAGDVGDHPDEHYNHNALPKVDSLTIKNVQGQNIKEAGSIKGIASSA 395
Query: 392 FANICLSNISLSINPGS--YNSWECSNIHGSSESVFPEPCPELENSSSNSSST 442
F+ ICLSNI L GS W+C ++ G + + P PC EL ++S S T
Sbjct: 396 FSRICLSNIKLH---GSVPVRPWKCESVSGGALDLQPSPCTELTSTSGTSFCT 445
>gi|359489656|ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 479
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/408 (48%), Positives = 267/408 (65%), Gaps = 1/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R HS S+ +FG VGDG+TLNT AFQ+A+ L + +GGAQLYVP+GKWLTGSF+LTSH
Sbjct: 47 RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHF 106
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL + AV+L SQ+ S W V+ PLPSYGRG + RY SLI G L DV++TGDNGTI
Sbjct: 107 TLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTI 166
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG +WW F L Y+RP+L+E + S ++ +SNLT LN+P++N+HPVY N+ IQ I
Sbjct: 167 DGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGI 226
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI PDS N IEDC I G D +++KSGWDEYGIAYG PT + IRR
Sbjct: 227 TILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 286
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S + +A GSEMSGGI +V+ E I +S +GI +T GRGGY++ I + +
Sbjct: 287 LTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTM 346
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ AF GN GSH D+ +DP A P I I ++D++ N+++A GI PF IC
Sbjct: 347 KTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGIC 406
Query: 397 LSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
+SN+++ + + W C+++ G S V P PC L + +S C
Sbjct: 407 ISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQGPEKTSLC 454
>gi|224058441|ref|XP_002299511.1| predicted protein [Populus trichocarpa]
gi|222846769|gb|EEE84316.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/411 (47%), Positives = 275/411 (66%), Gaps = 1/411 (0%)
Query: 34 LDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLT 93
L R HS S+++FG VGDG T NT AFQ AI +L F+ +GG+ LYVP G+WLTGSFNLT
Sbjct: 46 LSCRAHSASVSDFGGVGDGTTANTKAFQAAIDHLSQFSSEGGSILYVPPGRWLTGSFNLT 105
Query: 94 SHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDN 153
S+ TL+L+K AV+L SQ+ S + +++PLPSYGRG + G RY SLI G L DV++TG N
Sbjct: 106 SYFTLYLDKDAVLLASQDESEYPLIEPLPSYGRGRDADGARYSSLIFGNNLTDVIITGAN 165
Query: 154 GTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHI 213
GTIDGQG +WW F + LNY+RP+L+E + S N+ +SNLT +N+P++N+HPVYCSNV +
Sbjct: 166 GTIDGQGELWWTKFRAGELNYTRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVV 225
Query: 214 QNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVH 273
Q +++ AP SP T GI PDS N IEDC I G D +++KSGWDEYGI++G PT +
Sbjct: 226 QGLTILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLV 285
Query: 274 IRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD 333
IRR+ S + + +A GSEMSGGI +V+ E I DS +G+ +T GRGGY++ I +
Sbjct: 286 IRRLTCISPTSAVIALGSEMSGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRG 345
Query: 334 AELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
L + F GN GSHPD+++DP+A+P I I ++D++ N+T+A GI PF
Sbjct: 346 MTLKTMKWVFWMTGNYGSHPDNNYDPNAIPVIQNINYRDVVAENVTMAAKLEGIAGDPFT 405
Query: 394 NICLSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
IC+SN+++ + S W C+++ G + V P+PC L + C
Sbjct: 406 GICISNVTIGLAQNSKKLQWNCTDVAGITSEVNPKPCALLPDQGPGKIGGC 456
>gi|223635599|sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase; Short=PG; AltName:
Full=Pectinase
Length = 491
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/408 (48%), Positives = 267/408 (65%), Gaps = 1/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R HS S+ +FG VGDG+TLNT AFQ+A+ L + +GGAQLYVP+GKWLTGSF+LTSH
Sbjct: 59 RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHF 118
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL + AV+L SQ+ S W V+ PLPSYGRG + RY SLI G L DV++TGDNGTI
Sbjct: 119 TLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTI 178
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG +WW F L Y+RP+L+E + S ++ +SNLT LN+P++N+HPVY N+ IQ I
Sbjct: 179 DGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGI 238
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI PDS N IEDC I G D +++KSGWDEYGIAYG PT + IRR
Sbjct: 239 TILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 298
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S + +A GSEMSGGI +V+ E I +S +GI +T GRGGY++ I + +
Sbjct: 299 LTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTM 358
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ AF GN GSH D+ +DP A P I I ++D++ N+++A GI PF IC
Sbjct: 359 KTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGIC 418
Query: 397 LSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
+SN+++ + + W C+++ G S V P PC L + +S C
Sbjct: 419 ISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQGPEKTSLC 466
>gi|115445377|ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|50252020|dbj|BAD27952.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113535999|dbj|BAF08382.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|215686497|dbj|BAG87758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765347|dbj|BAG87044.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622550|gb|EEE56682.1| hypothetical protein OsJ_06128 [Oryza sativa Japonica Group]
Length = 443
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/411 (48%), Positives = 275/411 (66%), Gaps = 2/411 (0%)
Query: 28 CDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLT 87
C PRP +VSI EFG VGDG+T+NT AF A++ ++ +GG L VP+G WLT
Sbjct: 30 CAGAVPARPRPETVSIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPAGTWLT 89
Query: 88 GSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDV 147
GSFNLTSH+TLFL +GAV+ +Q W + +PLPSYGRG ELPG RY S I+G LRD+
Sbjct: 90 GSFNLTSHMTLFLARGAVLKATQETRSWPLAEPLPSYGRGRELPGARYTSFIHGDGLRDI 149
Query: 148 VVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
V+TGD G IDGQG VWW+ + ++L ++RP+L+EF+ S + +SN+ N+P +NIHPVY
Sbjct: 150 VITGDKGIIDGQGDVWWNMWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFWNIHPVY 209
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
C NV I N+ + AP +SP T G+ PDSS NVCIED I+ G D +++KSGWDEYGIAYGR
Sbjct: 210 CDNVVITNMMIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGR 269
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
P++ + IRRV SS S +A GSE SGG+SNV VE +++S GI +T GRGG+IR
Sbjct: 270 PSSGITIRRV-RGSSPFSGIAIGSEASGGVSNVLVEDCSIFNSGYGIHIKTNIGRGGFIR 328
Query: 328 QIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGI 387
I + + + ++ G+ G HPD+ F ALP +D ++ K++ G N+ G+ GI
Sbjct: 329 NITVDNVRMNSVRNGLRIAGDVGDHPDEHFSQLALPTVDAVSIKNVWGVNVQQPGSIEGI 388
Query: 388 QEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSN 438
+ +PF ICL+N+ L + +W+C ++HG++ V P PC EL S S+
Sbjct: 389 RNSPFTRICLANVKL-FGWRNNAAWKCRDVHGAALGVQPGPCAELTTSLSS 438
>gi|224134791|ref|XP_002327490.1| predicted protein [Populus trichocarpa]
gi|222836044|gb|EEE74465.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/412 (49%), Positives = 268/412 (65%), Gaps = 1/412 (0%)
Query: 26 GQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW 85
G + ++ R HS +T+FG VGDGKT NT AF+ AI L +A GGAQL VP GKW
Sbjct: 17 GASTEYQAINCRKHSAVLTDFGGVGDGKTSNTKAFKAAIAELSQYASDGGAQLIVPPGKW 76
Query: 86 LTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLR 145
LTGSFNL+SH TLFL K AV+L SQ+ + W PLPSYG G + R+ SLI G L
Sbjct: 77 LTGSFNLSSHFTLFLHKDAVLLASQDEAEWPAFPPLPSYGVGRDEHAGRFSSLIFGTHLT 136
Query: 146 DVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHP 205
DVVVTG+NGTIDGQG+VWWD F + L +RP+L+EF+ S+ V +SNLT +N+P++N+HP
Sbjct: 137 DVVVTGNNGTIDGQGAVWWDKFHQKKLKLTRPYLIEFLYSDQVQISNLTLINSPSWNVHP 196
Query: 206 VYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAY 265
YCSNV IQ +++ AP +SP T GI PDSS NV IED + G D I++KSGWDEYGI +
Sbjct: 197 TYCSNVLIQWLTILAPVDSPNTDGINPDSSSNVRIEDSFVVSGDDCIAVKSGWDEYGIKF 256
Query: 266 GRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGY 325
GRPT + IRR S +++A GSEMSGGI +V+ E I + +G+ +T GRG Y
Sbjct: 257 GRPTQHLVIRRFTCISPDSATIALGSEMSGGIQDVRAEDITALSTQSGVRIKTAVGRGAY 316
Query: 326 IRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFT 385
++ I + L + AF G+ GSHPD +DP ALP I I++KDI+ N+T +
Sbjct: 317 VKDIFVRRMTLKTMKYAFWMTGSYGSHPDTGYDPKALPEIKGISYKDIVAENVTYSARLE 376
Query: 386 GIQEAPFANICLSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELENSS 436
GI+ PF IC+SN+++S+ W C++I G S V P+PC L S
Sbjct: 377 GIENDPFTGICISNVNISLTQKPKELQWNCTDIQGVSSKVTPQPCAALLEKS 428
>gi|302767960|ref|XP_002967400.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
gi|300165391|gb|EFJ31999.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
Length = 426
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/397 (49%), Positives = 272/397 (68%), Gaps = 3/397 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RP SI +FG V DG TLNT AFQ AI ++ SF GGA LY+P GKWLTG FNLTSH+
Sbjct: 26 RPRVFSIADFGGVSDGITLNTKAFQKAIDHIGSFGKLGGATLYIPRGKWLTGCFNLTSHM 85
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFLE+ A IL S++P W VVDPLPSYGRG ELPG+RY SL++G + DV +TG+NGTI
Sbjct: 86 TLFLEQDATILASEDPQDWPVVDPLPSYGRGRELPGKRYTSLLHGLRITDVAITGNNGTI 145
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG VWW+ F S++L ++R LVEF+ S N++V N+T +N+P + +HPVY S+V I+ +
Sbjct: 146 DGQGLVWWNRFRSKTLQHTRGSLVEFMFSSNILVHNVTLINSPFWTLHPVYTSDVMIKGV 205
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP ++P T G+ PDSS NVCI D I+ G DA+++KSGWDEYG+A+ RP+ DV +
Sbjct: 206 TILAPHKAPNTDGVDPDSSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFLVN 265
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ + S G ++ GSEMSGGI NV + + ++ GI +T+ GRG YIR + E+
Sbjct: 266 LTVSGSHG--ISLGSEMSGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFEI 323
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ VAF G G HPD ++ A I+ I+F+D++G + AG+F G+ ++PF + C
Sbjct: 324 LDTGVAFSFTGIYGDHPDAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHTC 383
Query: 397 LSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELE 433
++++L +N G N W CS I G S V P PCPEL+
Sbjct: 384 FTDVALELN-GKSNHWNCSYIEGYSRHVSPPPCPELQ 419
>gi|302753776|ref|XP_002960312.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
gi|300171251|gb|EFJ37851.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
Length = 455
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/397 (49%), Positives = 272/397 (68%), Gaps = 3/397 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RP SI +FG V DG TLNT AFQ AI ++ SF GGA LY+P GKWLTG FNLTSH+
Sbjct: 55 RPRVFSIADFGGVSDGITLNTKAFQKAIDHIGSFGKLGGATLYIPRGKWLTGCFNLTSHM 114
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFLE+ A IL S++P W VVDPLPSYGRG ELPG+RY SL++G + DV +TG+NGTI
Sbjct: 115 TLFLEQDATILASEDPQDWPVVDPLPSYGRGRELPGKRYTSLLHGLRITDVAITGNNGTI 174
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG +WW+ F S++L ++R LVEF+ S N++V N+T +N+P + +HPVY S+V I+ +
Sbjct: 175 DGQGLIWWNRFRSKTLQHTRGSLVEFMFSSNILVHNVTLINSPFWTLHPVYTSDVMIKGV 234
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP ++P T G+ PDSS NVCI D I+ G DA+++KSGWDEYG+A+ RP+ DV +
Sbjct: 235 TILAPHKAPNTDGVDPDSSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFLVN 294
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ + S G ++ GSEMSGGI NV + + ++ GI +T+ GRG YIR + E+
Sbjct: 295 LTVSGSHG--ISLGSEMSGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFEI 352
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ VAF G G HPD ++ A I+ I+F+D++G + AG+F G+ ++PF + C
Sbjct: 353 LDTGVAFSFTGIYGDHPDAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHTC 412
Query: 397 LSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELE 433
++++L +N G N W CS I G S V P PCPEL+
Sbjct: 413 FTDVALELN-GKSNHWNCSYIEGYSRHVSPPPCPELQ 448
>gi|242061204|ref|XP_002451891.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
gi|241931722|gb|EES04867.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
Length = 448
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/408 (48%), Positives = 276/408 (67%), Gaps = 2/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RP ++SIT+FG VGDG+TLNT AF+ A++ ++ +GG L+VP+G WLTGSFNLTSH+
Sbjct: 41 RPEAISITDFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLTGSFNLTSHM 100
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL +GAV+ +Q+ W +++PLPSYGRG ELPG RY S I+G LRDV +TGD G I
Sbjct: 101 TLFLARGAVLKATQDTRRWPLMEPLPSYGRGRELPGARYASFIHGNGLRDVAITGDKGVI 160
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG VWW+ + ++L ++RP+LVEF+ S + +SN+ N+P +NIHPVYC NV + N+
Sbjct: 161 DGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTNM 220
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+ AP +SP T GI PDSS NVCIED I+ G D +++KSGWDEYGIAYGRP++ + IRR
Sbjct: 221 MILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRR 280
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V SS S +A GSE SGG+ +V VE ++DS GI +T GRGGYIR + + + +
Sbjct: 281 V-RGSSPFSGIAIGSEASGGVRDVLVEDCSIFDSGYGIHIKTNVGRGGYIRNVTVDNVRM 339
Query: 337 YNINVA-FGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
+ ++ G+ G HPD F A+P +D + ++ G N+ G+ GI+ +PF I
Sbjct: 340 SGVRISGVRIAGDVGDHPDAHFSQLAVPLVDAVRISNVWGVNVQHPGSLEGIRSSPFTRI 399
Query: 396 CLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
CLSN+ L + +W C ++ G++ V P PC EL S +++ S+C
Sbjct: 400 CLSNVKLFGWRKNDAAWRCRDVRGAALGVQPSPCAELATSFASAGSSC 447
>gi|293332875|ref|NP_001170283.1| uncharacterized protein LOC100384246 precursor [Zea mays]
gi|224028521|gb|ACN33336.1| unknown [Zea mays]
gi|413925951|gb|AFW65883.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 451
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/407 (48%), Positives = 271/407 (66%), Gaps = 2/407 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RP +SI +FG VGDG+TLNT AF+ A++ ++ +GG L+VP+G WL GSFNLTSH+
Sbjct: 46 RPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHM 105
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL +GAV+ +Q+ W +V+PLPSYGRG ELPG RY S I+G LRDVV+TGD G I
Sbjct: 106 TLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGDRGVI 165
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG VWW+ + ++L ++RP+LVEF+ S + +SN+ N+P +NIHPVYC NV + N+
Sbjct: 166 DGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTNM 225
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+ AP +SP T G+ PDSS NVCIED I+ G D +++KSGWDEYGIAYGRP+ V +RR
Sbjct: 226 MILAPRDSPNTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRR 285
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V SS S +A GSE SGG+ +V VE ++DS GI +T GRGGYIR + + L
Sbjct: 286 V-RGSSPFSGIAIGSEASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRL 344
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ G+ G HPD F A+P +D + ++ G N+ G+ GI+ +PF IC
Sbjct: 345 TGVRSGVRIAGDVGDHPDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRIC 404
Query: 397 LSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
LSN+ L S +W+C ++ G++ V P PC EL S +++ S+C
Sbjct: 405 LSNVKL-FGWRSDAAWKCRDVRGAALGVQPSPCAELATSFASARSSC 450
>gi|357509171|ref|XP_003624874.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
gi|355499889|gb|AES81092.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
Length = 476
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/428 (47%), Positives = 286/428 (66%), Gaps = 7/428 (1%)
Query: 10 LLALCSAILINGEVSDGQCD-DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLK 68
++ + S +LI G ++ +C+ D ++ R HS +T+FG VGDGKT NT AF AI L
Sbjct: 20 VICVISIVLIFGSLA--ECNLDYLAINCRKHSAVLTDFGGVGDGKTSNTKAFNTAITKLS 77
Query: 69 SFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGI 128
+A+ GGAQL VP GKWLTGSFNLTSH TLFL+KGAVILGSQ+ S W + PLPSYGRG
Sbjct: 78 QYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKGAVILGSQDESQWPQLPPLPSYGRGR 137
Query: 129 ELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENV 188
+ PG R+ SLI G L DV++TG+NGTIDGQGS WWD F ++ L +RP+++E + S+ +
Sbjct: 138 DAPGPRFSSLIFGTHLTDVIITGNNGTIDGQGSYWWDKFHNKQLKITRPYMIEILYSDQI 197
Query: 189 VVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMG 248
+SNLT +N+P++ +HP Y SN+ I+ +++ AP +SP T GI PDSS NV IED I G
Sbjct: 198 QISNLTLINSPSWFVHPTYSSNIIIKGLTILAPVDSPNTDGIDPDSSTNVRIEDNYIVSG 257
Query: 249 HDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY 308
D I++KSGWD+YGI +G+P+ + IRR+ S + +A GSEMSGGI NV+VE +
Sbjct: 258 DDCIAIKSGWDQYGIKFGKPSKQIIIRRLTCISPDSAMIALGSEMSGGIENVRVEDVTAI 317
Query: 309 DSLNGIEFRTTKGRGGYIRQIVISDAELYNI-NVAFGACGNCGSHPDDDFDPDALPAIDQ 367
++ + + ++ GRGGY++ I + +L I F G+ G HPD+ FDP ALP I
Sbjct: 318 NTESAVRIKSAVGRGGYVKDIFVKGVKLNTILRYVFWLTGSYGDHPDNGFDPKALPKITG 377
Query: 368 ITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNS---WECSNIHGSSESV 424
I F+D+I N+T+AG GI PF IC+SN+++ ++ W C+++ G + +V
Sbjct: 378 IIFRDVIAKNVTVAGQLEGISNDPFTGICISNVTIELSELKKKKKLPWNCTDVSGVTSNV 437
Query: 425 FPEPCPEL 432
P+PC L
Sbjct: 438 VPKPCDLL 445
>gi|55295844|dbj|BAD67712.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|125553735|gb|EAY99340.1| hypothetical protein OsI_21311 [Oryza sativa Indica Group]
gi|125595774|gb|EAZ35554.1| hypothetical protein OsJ_19837 [Oryza sativa Japonica Group]
Length = 485
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/402 (48%), Positives = 271/402 (67%), Gaps = 3/402 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGG--AQLYVPSGKWLTGSFNLTS 94
R H+ S+T+FG VGDG T NT AF++A+ +L ++ +GG A LYVP+GKWLTG FNLTS
Sbjct: 54 RAHTASLTDFGGVGDGTTSNTAAFKSAVDHLSQYSGEGGGGAMLYVPAGKWLTGPFNLTS 113
Query: 95 HLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
H TLFL AVILGSQ+ W ++DPLPSYGRG + G RY SLI G L DVV+TG NG
Sbjct: 114 HFTLFLHSDAVILGSQDMGEWPIIDPLPSYGRGRDKAGGRYASLIGGSNLTDVVITGANG 173
Query: 155 TIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
TIDGQG++WW F S L Y+R +L+E + S+ VV+SN+T +N+PA+NIHPVY SN+ +Q
Sbjct: 174 TIDGQGAMWWSKFHSNKLKYTRGYLIEVMHSDTVVISNVTLVNSPAWNIHPVYSSNIVVQ 233
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
+++ AP SP T GI PDS +V IEDC I G D +++KSGWDEYGIAYG P+ + +
Sbjct: 234 GVTILAPTHSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGIAYGMPSQHIVV 293
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
RR+ S + + +A GSEMSGGIS+V+ E I +S + + +T GRG Y+R + +
Sbjct: 294 RRLTCVSPTSAVIALGSEMSGGISDVRAEDITAVNSESAVRIKTAVGRGAYVRDVFVRGM 353
Query: 335 ELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFA 393
L + F GN SHPDD +DP+A+P +D I+++D++ T + A GIQ APF
Sbjct: 354 SLDTMKWVFWMTGNYKSHPDDGYDPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFR 413
Query: 394 NICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENS 435
IC++N++ +++ W C++I G S V P PC L+ +
Sbjct: 414 GICIANVTATLSKSRKYPWTCTDIEGVSTGVTPAPCQPLQGA 455
>gi|125538851|gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indica Group]
Length = 443
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/420 (47%), Positives = 277/420 (65%), Gaps = 10/420 (2%)
Query: 27 QCDDQPTL--------DPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQL 78
QCD T PRP +VSI EFG VGDG+T+NT AF A++ ++ +GG L
Sbjct: 21 QCDAAETTTCAGAVPARPRPETVSIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTL 80
Query: 79 YVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSL 138
VP+G WLTGSFNLTSH+TLFL +GAV+ +Q W + +PLPSYGRG ELPG RY S
Sbjct: 81 LVPAGTWLTGSFNLTSHMTLFLARGAVLKATQETRSWPLAEPLPSYGRGRELPGARYASF 140
Query: 139 INGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNA 198
I+G L DVV+TGD G IDGQG VWW+ + ++L ++RP+L+EF+ S + +SN+ N+
Sbjct: 141 IHGDGLHDVVITGDKGIIDGQGDVWWNMWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNS 200
Query: 199 PAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGW 258
P +NIHPVYC NV I N+ + AP +SP T G+ PDSS NVCIED I+ G D +++KSGW
Sbjct: 201 PFWNIHPVYCDNVVITNMMIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGW 260
Query: 259 DEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRT 318
DEYGIAYGRP++ + IRRV SS S +A GSE SGG+S+V VE +++S GI +T
Sbjct: 261 DEYGIAYGRPSSGITIRRV-RGSSPFSGIAIGSEASGGVSDVLVEDCSIFNSGYGIHIKT 319
Query: 319 TKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNI 378
GRGG+IR I + + + ++ G+ G HPD+ F ALP +D ++ K++ G N+
Sbjct: 320 NIGRGGFIRNITVDNVRMNSVRNGLRIAGDVGDHPDEHFSQLALPTVDGVSIKNVWGVNV 379
Query: 379 TIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSN 438
G+ GI+ +PF ICL+N+ L + +W+C ++HG++ V P PC EL S S+
Sbjct: 380 QQPGSIEGIRNSPFTRICLANVKL-FGWRNNAAWKCRDVHGAALGVQPGPCAELTTSLSS 438
>gi|326496364|dbj|BAJ94644.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509249|dbj|BAJ91541.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510305|dbj|BAJ87369.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518514|dbj|BAJ88286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/411 (51%), Positives = 274/411 (66%), Gaps = 2/411 (0%)
Query: 32 PTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFN 91
P R +SI FG GDG+TLNT AF A+ + +GGA LYVP G WLTG F+
Sbjct: 39 PAPPKRGAWMSIASFGGAGDGRTLNTAAFAAAVASIARRRARGGALLYVPPGVWLTGPFS 98
Query: 92 LTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG 151
LTSH+TLFL +GAVI +Q+ S W ++DPLPSYGRG ELPG+RY SLI+G L+DV +TG
Sbjct: 99 LTSHMTLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGKRYISLIHGNGLQDVFITG 158
Query: 152 DNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNV 211
+NGTIDGQGSVWWD + +L ++RPHL+E + S N +VSNL F ++P +NIHPVYCSNV
Sbjct: 159 ENGTIDGQGSVWWDMWKKGTLPFTRPHLLELMDSSNAIVSNLVFQDSPFWNIHPVYCSNV 218
Query: 212 HIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTD 271
I+N+++ AP +SP T GI PDSS NVCIEDC I+ G D I++KSGWDEYGIAYGRP++D
Sbjct: 219 VIRNLTILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSD 278
Query: 272 VHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVI 331
+ IRR+ SS + + GSE SGG+ NV E ++ Y S G+ +T GRGG+IR I +
Sbjct: 279 ITIRRI-TGSSPFAGFSVGSETSGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITV 337
Query: 332 SDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAP 391
SD L N+ G+ G HPD+ ++ +ALP +D + K++ G NI AG GI +
Sbjct: 338 SDVILDNVRYGLRIAGDVGGHPDERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSA 397
Query: 392 FANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSST 442
F+ ICLSNI L W+C + G + V P PC EL + S S T
Sbjct: 398 FSRICLSNIKLH-GSAPVRPWKCQAVSGGALDVQPSPCTELTSMSGMSFCT 447
>gi|326488219|dbj|BAJ89948.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/411 (50%), Positives = 274/411 (66%), Gaps = 2/411 (0%)
Query: 32 PTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFN 91
P R +S+ FG GDG+TLNT AF A+ + +GGA LYVP G WLTG F+
Sbjct: 39 PAPPKRGAWMSVASFGGAGDGRTLNTAAFAAAVASIARRRARGGALLYVPPGVWLTGPFS 98
Query: 92 LTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG 151
LTSH+TLFL +GAVI +Q+ S W ++DPLPSYGRG ELPG+RY SLI+G L+DV +TG
Sbjct: 99 LTSHMTLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGKRYISLIHGNGLQDVFITG 158
Query: 152 DNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNV 211
+NGTIDGQGSVWWD + +L ++RPHL+E + S N +VSNL F ++P +NIHPVYCSNV
Sbjct: 159 ENGTIDGQGSVWWDMWKKGTLPFTRPHLLELMDSSNAIVSNLVFQDSPFWNIHPVYCSNV 218
Query: 212 HIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTD 271
I+N+++ AP +SP T GI PDSS NVCIEDC I+ G D I++KSGWDEYGIAYGRP++D
Sbjct: 219 VIRNLTILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSD 278
Query: 272 VHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVI 331
+ IRR+ SS + + GSE SGG+ NV E ++ Y S G+ +T GRGG+IR I +
Sbjct: 279 ITIRRI-TGSSPFAGFSVGSETSGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITV 337
Query: 332 SDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAP 391
SD L N+ G+ G HPD+ ++ +ALP +D + K++ G NI AG GI +
Sbjct: 338 SDVILDNVRYGLRIAGDVGGHPDERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSA 397
Query: 392 FANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSST 442
F+ ICLSNI L W+C + G + V P PC EL + S S T
Sbjct: 398 FSRICLSNIKLH-GSAPVRPWKCQAVSGGALDVQPSPCTELTSMSGMSFCT 447
>gi|15229058|ref|NP_190464.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|6522571|emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332644955|gb|AEE78476.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 469
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/410 (47%), Positives = 273/410 (66%), Gaps = 5/410 (1%)
Query: 34 LDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLT 93
L+ R HS +T+FGAVGDGKT NT AF+NAI L A GGAQL VP GKWLTGSFNLT
Sbjct: 38 LNCRKHSAILTDFGAVGDGKTSNTKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSFNLT 97
Query: 94 SHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR-RYKSLINGYMLRDVVVTGD 152
SH TLF+++GA IL SQ+ S W V+ PLPSYG+G + G R+ SLI+G L DVV+TG+
Sbjct: 98 SHFTLFIQRGATILASQDESEWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGN 157
Query: 153 NGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVH 212
NGTI+GQG WWD F + +RP+L+E + S+N+ +SN+T +++P++NIHPVYC++V
Sbjct: 158 NGTINGQGQYWWDKFKKKQFKITRPYLIEILFSKNIQISNITLIDSPSWNIHPVYCNSVI 217
Query: 213 IQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDV 272
+++++V AP P T GI PDS N IEDC I G D I++KSGWD+YGI +G PT +
Sbjct: 218 VKSVTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQL 277
Query: 273 HIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVIS 332
IRR+ S + VA GSEMSGGI +V++E + L ++ + I +T GRG Y++ I
Sbjct: 278 SIRRLTCISPKSAGVALGSEMSGGIKDVRIEDVTLTNTESAIRIKTAVGRGAYVKDIYAR 337
Query: 333 DAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPF 392
+ + F GN GSHPD+ FDP ALP I I ++D+ N+T++ + GI + PF
Sbjct: 338 RITMKTMKYVFWMSGNYGSHPDEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPF 397
Query: 393 ANICLSNISLSINPGSYN-SWECSNIHGSSESVFPEPC---PELENSSSN 438
IC+SN+++++ + W C+++ G + V PEPC PE + + N
Sbjct: 398 TGICISNVTIALAAKAKKMQWNCTDVAGVTSRVTPEPCSLLPEKKAQAKN 447
>gi|15233124|ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|334186188|ref|NP_001190154.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6850840|emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|332646690|gb|AEE80211.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646691|gb|AEE80212.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646692|gb|AEE80213.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 476
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/406 (47%), Positives = 274/406 (67%), Gaps = 1/406 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R HS SITE+G VGDGKTLNT AFQ+A+ +L ++ +GGAQL+VP+GKWLTGSFNLTSH
Sbjct: 41 RSHSASITEYGGVGDGKTLNTKAFQSAVDHLSQYSSEGGAQLFVPAGKWLTGSFNLTSHF 100
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL K A++L +Q+ + + ++ LPSYGRG + G R+ SLI G L DV++TG+NGTI
Sbjct: 101 TLFLHKDAILLAAQDLNEYPILKALPSYGRGRDAAGGRFASLIFGTNLSDVIITGNNGTI 160
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQGS WW F L Y+RP+L+E + S+ + +SNLTFL++P++NIHPVY SN+ ++ +
Sbjct: 161 DGQGSFWWQKFHGGKLKYTRPYLIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGV 220
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP +SP T GI PDS N IEDC I G D I++KSGWDEYGI++G PT + IRR
Sbjct: 221 TIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRR 280
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S +++A GSEMSGGI +V+ E I Y + +G+ +T GRG +++ I + L
Sbjct: 281 LTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNL 340
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ + F GN +H D +DP ALP I I ++DI+ N+++AG GI PF IC
Sbjct: 341 HTMKWVFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGIC 400
Query: 397 LSNISLSINPGSYNS-WECSNIHGSSESVFPEPCPELENSSSNSSS 441
+SN ++S+ + W CS++ G + V P+PC L+ S ++
Sbjct: 401 ISNATISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLLDGQESETTK 446
>gi|357507519|ref|XP_003624048.1| Polygalacturonase [Medicago truncatula]
gi|355499063|gb|AES80266.1| Polygalacturonase [Medicago truncatula]
Length = 483
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/408 (48%), Positives = 272/408 (66%), Gaps = 1/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R HS S+T+FG VGDG T NT AFQ+AI +L + +GG+QLYVP+GKWLTGSF+LTSH
Sbjct: 51 RAHSASLTDFGGVGDGNTSNTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHF 110
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L++ AV+L SQ+ + W V++PLPSYGRG + P R++SLI G L DV+VTG NGTI
Sbjct: 111 TLYLDRDAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFRSLIFGTNLTDVIVTGGNGTI 170
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG+ WW F + L Y+RP+L+E + S+++ +SNLT LN+P++N+HPVY SN+ IQ I
Sbjct: 171 DGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGI 230
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI PDS N IEDC I G D +++KSGWDEYGI +G PT + IRR
Sbjct: 231 TIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRR 290
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S +++A GSEMSGGI +V+ E I + +G+ +T GRGGY++ I + +
Sbjct: 291 LTCISPFSATIALGSEMSGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTM 350
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ + AF G+ SH D FDP+ALP I I ++D++ N+TIA F GI PF IC
Sbjct: 351 HTMKWAFKMTGDYNSHADTHFDPNALPEIANINYRDVVAENVTIAARFQGISNDPFKGIC 410
Query: 397 LSNISLSIN-PGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
++N++L + SW C++I G + V P PC L + C
Sbjct: 411 IANVTLGMAVKAKKRSWTCTDIEGMTSGVTPPPCDLLPDQGPEKIGAC 458
>gi|357504351|ref|XP_003622464.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355497479|gb|AES78682.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 479
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/448 (46%), Positives = 290/448 (64%), Gaps = 8/448 (1%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCD----DQPTLDPRPHSVSITEFGAVGDGKTLN 56
MK+ ALLL+ + S + E G+ + L+ R HSVS+ +FG VGDGKT N
Sbjct: 14 MKLVYALLLVTLMSSKVT---ECRKGKIISTSFEYSALNCRAHSVSLKDFGGVGDGKTSN 70
Query: 57 TLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWD 116
T AF++AI +L A +GG+QLYVP+GKWLTGSF+L SH TL+L K AV+L SQ+ + W
Sbjct: 71 TKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSLISHFTLYLHKDAVLLASQDINEWP 130
Query: 117 VVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSR 176
V+ PLPSYGRG + R+ SLI G L DV+VTGDNGTIDGQGS WW F ++ L Y+R
Sbjct: 131 VIKPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVTGDNGTIDGQGSFWWQQFHNKKLKYTR 190
Query: 177 PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSD 236
P+L+E + S+N+ +SNLT L++P++NIHPVY SN+ I+ I++ AP SP T GI PDS
Sbjct: 191 PYLIELMFSDNIQISNLTLLDSPSWNIHPVYSSNIIIKGITIIAPIRSPNTDGINPDSCT 250
Query: 237 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 296
N IEDC I G D +++KSGWDEYGI +G PT + IRR+ S +++A GSEMSGG
Sbjct: 251 NTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPYSATIALGSEMSGG 310
Query: 297 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDD 356
I +V+ E I + +GI +T GRGGY++ I + ++ + AF GN GSH D +
Sbjct: 311 IQDVRAEDITAVHTESGIRIKTAVGRGGYVKDIYVKKMTMHTMKWAFWITGNYGSHADKN 370
Query: 357 FDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNS-WECS 415
++ ALP I I ++D++ N+++AGN GI PF IC+SN+++++ + W C+
Sbjct: 371 YNHSALPEIKNIHYRDMVADNVSMAGNLEGISNDPFTGICISNVTITMAAKAKKQPWTCN 430
Query: 416 NIHGSSESVFPEPCPELENSSSNSSSTC 443
+I G + V P+PC L + C
Sbjct: 431 DIEGITSGVTPKPCDLLPEQGKENIRDC 458
>gi|356524183|ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 474
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/421 (47%), Positives = 284/421 (67%), Gaps = 5/421 (1%)
Query: 24 SDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSG 83
S C + +L R +S+T+FG VGDG+TLNT AF+ A++ ++ +GG LYVP G
Sbjct: 56 STTTCSNIVSLRYRSDRISVTDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYVPPG 115
Query: 84 KWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM 143
+LT SFNLTSH+TL+L GAVI +Q +W ++ PLPSYGRG ELPG RY S I+G
Sbjct: 116 VYLTESFNLTSHMTLYLAAGAVIKATQELGNWPLIAPLPSYGRGRELPGGRYMSFIHGDG 175
Query: 144 LRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNI 203
L DVV+TG+NGTIDGQG VWW+ + ++L ++RP+LVEF++S+++++SN+ F N+P +NI
Sbjct: 176 LSDVVITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWNI 235
Query: 204 HPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGI 263
HPVYCSNV ++ +++ AP +SP T GI PDSS NVCIED I+ G D +++KSGWDEYGI
Sbjct: 236 HPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 295
Query: 264 AYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG 323
AYGRP+ + IRR L SS + +A GSE SGG+ NV E I+L++ GI +T GRG
Sbjct: 296 AYGRPSYGITIRR-LTGSSPFAGIAIGSETSGGVENVLAEHINLFNMGVGIHIKTNSGRG 354
Query: 324 GYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGN 383
G I+ I ++ + N G+ G HPD+ F+P+ALP + IT K++ G + AG
Sbjct: 355 GLIKNITVAHVYVENARQGIKIAGDVGGHPDEKFNPNALPVVKGITIKNVWGVRVNQAGL 414
Query: 384 FTGIQEAPFANICLSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELENSSSNSSST 442
G++ +PF ++CLSNI+ G + SW+CS++ G + V P PC +L SS +
Sbjct: 415 IHGLRNSPFTDVCLSNINFHGMRGPRSPSWKCSDVFGFAHQVSPWPCSQL---SSQEPGS 471
Query: 443 C 443
C
Sbjct: 472 C 472
>gi|224064057|ref|XP_002301370.1| predicted protein [Populus trichocarpa]
gi|222843096|gb|EEE80643.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/408 (47%), Positives = 268/408 (65%), Gaps = 1/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R HS S+T+FG VGDG T NT AF++AI +L F+ GG+QL+VP+GKWLTGSF+LTSH
Sbjct: 39 RAHSASLTDFGGVGDGTTSNTKAFKDAIDHLSQFSSDGGSQLFVPAGKWLTGSFSLTSHF 98
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L K AV+L SQ+ W V+ PLPSYGRG + RY SLI G L DV++TG+NGTI
Sbjct: 99 TLYLHKDAVLLASQDMQEWPVMKPLPSYGRGRDAAAGRYSSLIFGTNLTDVIITGNNGTI 158
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG+ WW F L Y+RP+L+E + S+ + +SNLT LN+P++N+HPVY ++ +Q I
Sbjct: 159 DGQGAFWWQNFHKGKLKYTRPYLIEIMFSDTIQISNLTLLNSPSWNVHPVYSRDILVQGI 218
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI PDS N IEDC I G D +++KSGWDEYGIA+G PT + IRR
Sbjct: 219 TIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQLVIRR 278
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S +++A GSEMSGGI +V+ E I + +G+ +T GRGGY++ I + +
Sbjct: 279 LTCISPYSATIALGSEMSGGIEDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTM 338
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ + F GN GSH D ++DP+ALP I I ++D++ N+T+A GI PF IC
Sbjct: 339 HTMKWVFWMTGNYGSHADKNYDPNALPLIQGINYRDMVADNVTMAARLEGIAGDPFKEIC 398
Query: 397 LSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
+SN+++ + P + W C+ I G + V P PC L + ++C
Sbjct: 399 ISNVTIGLAPKAKKVPWTCTEIEGMTSGVSPRPCDLLPDQGPEKITSC 446
>gi|449497436|ref|XP_004160401.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Cucumis sativus]
Length = 480
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/433 (47%), Positives = 274/433 (63%), Gaps = 2/433 (0%)
Query: 5 VALLLLLALCSAILINGEVSDGQCDDQ-PTLDPRPHSVSITEFGAVGDGKTLNTLAFQNA 63
++ ++LLAL S + G+ S Q P + R H+ IT+FG VGDG T NT AF+ A
Sbjct: 17 ISAVILLALLSLATVEGKRSCPTNYLQVPAISCRKHTALITDFGGVGDGVTSNTQAFRRA 76
Query: 64 IFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPS 123
I +L S A GGAQL VP GKWLTGSFNLTSH TLF+ K A ILGSQN S W V LPS
Sbjct: 77 IEHLSSLAADGGAQLTVPXGKWLTGSFNLTSHFTLFVHKDAKILGSQNESEWPQVALLPS 136
Query: 124 YGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFI 183
YG G + PG RY SLI G L DVV+TG+NGTIDGQG+ WWD F LN +RP+L+E +
Sbjct: 137 YGVGRDAPGGRYSSLIFGTNLTDVVITGNNGTIDGQGAYWWDKFHKGELNLTRPYLIEIM 196
Query: 184 SSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDC 243
S+ + +S+LT +N+P++ +HP+Y NV IQ +++ AP +SP T GI PDS N IEDC
Sbjct: 197 YSDQIQISDLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNTRIEDC 256
Query: 244 IIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVE 303
I G D I++KSGWD+YGI +G PT D+ I+R+ S + VA GSEMSGGI NV++E
Sbjct: 257 FIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEMSGGIRNVRIE 316
Query: 304 KIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALP 363
++ + + +T +GRGG+++ I + L + F GN SHPDD FDP ALP
Sbjct: 317 NFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDDKFDPAALP 376
Query: 364 AIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN-SWECSNIHGSSE 422
I I ++D++ N+T + GI PF NIC+SN+ + + W C+++ G S
Sbjct: 377 EITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTATPKKLQWNCTDVEGFSS 436
Query: 423 SVFPEPCPELENS 435
V P PC L +
Sbjct: 437 DVVPPPCAPLAKA 449
>gi|224096000|ref|XP_002310517.1| predicted protein [Populus trichocarpa]
gi|222853420|gb|EEE90967.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/406 (49%), Positives = 285/406 (70%), Gaps = 1/406 (0%)
Query: 34 LDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLT 93
L R +SI EFG VGDGKT NT F+ AI YL+ F + GGAQL VP G+W+TGSFNLT
Sbjct: 28 LPERKAVMSIREFGGVGDGKTSNTETFRKAIRYLQRFGESGGAQLNVPKGRWVTGSFNLT 87
Query: 94 SHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDN 153
S+ TLFLE+GAVILGSQ+P W +++PLPSYGRG E G R+ SL++G L +VV+TG+N
Sbjct: 88 SNFTLFLEEGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLVHGDGLTNVVITGNN 147
Query: 154 GTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHI 213
GTIDGQG +WW+ + +++L ++R HLVE ++S N++++NLTF NAP + IHPVYCSNV +
Sbjct: 148 GTIDGQGKMWWELWWNRTLEHTRGHLVELMNSNNILIANLTFCNAPFWTIHPVYCSNVVV 207
Query: 214 QNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVH 273
+++++ AP ++P T GI PDSS NVCIEDC I G D +++KSGWD+YGI RP++++
Sbjct: 208 KDMTILAPLKAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIV 267
Query: 274 IRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD 333
+RRV + + S V GSEMSGGI N+ +E +H++DS G+ +T GRGGYI I IS+
Sbjct: 268 VRRVSGTTPTCSGVGIGSEMSGGIFNITIEDLHVWDSAAGVRIKTDNGRGGYIANITISN 327
Query: 334 AELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
+ + V HPD+ +DP A+P + I+ +++I N T A G+++APF
Sbjct: 328 VTMERVKVPIRFSRGSNDHPDEGWDPKAVPVVKGISIRNVISFNSTKAPVLEGVEDAPFG 387
Query: 394 NICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNS 439
IC+ N+SL + S SW C + G ++ VFP PCP+L+++ S+S
Sbjct: 388 GICMKNVSL-LGVVSSLSWHCEFVSGFADEVFPTPCPQLQSNISSS 432
>gi|388509890|gb|AFK43011.1| unknown [Medicago truncatula]
Length = 483
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/408 (48%), Positives = 272/408 (66%), Gaps = 1/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R HS S+T+FG VGDG T NT AFQ+AI +L + +GG+QLYVP+GKWLTGSF+LTSH
Sbjct: 51 RAHSASLTDFGGVGDGNTSNTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHF 110
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L++ AV+L SQ+ + W V++PLPSYGRG + P R++SLI G L DV+VTG NGTI
Sbjct: 111 TLYLDRDAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFRSLIFGTNLTDVIVTGGNGTI 170
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG+ WW F + L Y+RP+L+E + S+++ +SNLT LN+P++N+HPVY SN+ IQ I
Sbjct: 171 DGQGAFWWQQFHRKELKYTRPYLIELMFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGI 230
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI PDS N IEDC I G D +++KSGWDEYGI +G PT + IRR
Sbjct: 231 TIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRR 290
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S +++A GSEMSGGI +V+ E I + +G+ +T GRGGY++ I + +
Sbjct: 291 LTCISPFSATIALGSEMSGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTM 350
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ + AF G+ SH D FDP+ALP I I ++D++ N+TIA F GI PF IC
Sbjct: 351 HTMKWAFKMTGDYNSHADTHFDPNALPEIANINYRDVVAENVTIAARFQGIFNDPFKGIC 410
Query: 397 LSNISLSIN-PGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
++N++L + SW C++I G + V P PC L + C
Sbjct: 411 IANVTLGMAVKAKKRSWTCTDIEGMTSGVTPPPCDLLPDQGPEKIGAC 458
>gi|357443847|ref|XP_003592201.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481249|gb|AES62452.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 478
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/433 (46%), Positives = 280/433 (64%), Gaps = 9/433 (2%)
Query: 10 LLALCSAILINGEVSDGQCD--------DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQ 61
++ + S +LI G +++ + D P ++ R HS +T+FGAVGDGKTLNT AF
Sbjct: 16 VIGVISVVLILGSLAECRVPSSIKLNNFDYPAINCRKHSAVLTDFGAVGDGKTLNTKAFN 75
Query: 62 NAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPL 121
AI L +A+ GGAQL VP GKWLTGSFNLTSH TLFL+K AVILGSQ+ S W + L
Sbjct: 76 AAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILGSQDESEWPQLLVL 135
Query: 122 PSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVE 181
PSYGRG + P R+ SLI G L DV++TGDNGTIDGQGS WWD F + L +RP+++E
Sbjct: 136 PSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHKKQLTLTRPYMIE 195
Query: 182 FISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIE 241
+ S+ + +SNLT +N+P + +HP+Y SN+ I +++ AP +SP T GI PDS NV IE
Sbjct: 196 IMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCTNVRIE 255
Query: 242 DCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQ 301
D I G D I++KSGWDEYGI G P+ + IRR+ S + VA GSEMSGGI +V+
Sbjct: 256 DNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGGIQDVR 315
Query: 302 VEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDA 361
+E + ++ + I ++ GRG +++ I + +L + F G+ G HPD+ FDP+A
Sbjct: 316 IEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNA 375
Query: 362 LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN-SWECSNIHGS 420
LP I I ++D+ N+TIAG GI PF IC+SN+++ ++ W C++I G
Sbjct: 376 LPKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGV 435
Query: 421 SESVFPEPCPELE 433
+ +V P+PC L+
Sbjct: 436 TSNVVPKPCELLQ 448
>gi|297816104|ref|XP_002875935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321773|gb|EFH52194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/410 (47%), Positives = 271/410 (66%), Gaps = 5/410 (1%)
Query: 34 LDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLT 93
L+ R HS +T+FGAVGDGKT NT AF+ AI L A GGAQL VP GKWLTGSFNLT
Sbjct: 38 LNCRKHSAILTDFGAVGDGKTSNTNAFKKAISKLSQMATDGGAQLVVPPGKWLTGSFNLT 97
Query: 94 SHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR-RYKSLINGYMLRDVVVTGD 152
SH TLF+++GA IL SQ+ S W V+ PLPSYG+G + G R+ SLI+G L DVV+TG+
Sbjct: 98 SHFTLFIQRGATILASQDESEWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGN 157
Query: 153 NGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVH 212
NGTI+GQG WWD F + +RP+L+E + S+N+ +SN+T +++P++NIHPVYC+NV
Sbjct: 158 NGTINGQGQYWWDKFKKKQFKLTRPYLIELLFSKNIQISNITLIDSPSWNIHPVYCNNVI 217
Query: 213 IQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDV 272
+++++V AP P T GI PDS N IEDC I G D I++KSGWD+YGI +G PT +
Sbjct: 218 VKSVTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQL 277
Query: 273 HIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVIS 332
IRR+ S + VA GSEMSGGI +V++E + L ++ + I +T GRG Y++ I
Sbjct: 278 SIRRLTCISPKSAGVALGSEMSGGIKDVRIEDVTLTNTESAIRIKTAAGRGAYVKDIFAR 337
Query: 333 DAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPF 392
+ + F GN SHPD+ FDP ALP + I ++D+ N+T++ + GI + PF
Sbjct: 338 RITMKTMKYVFWMSGNYNSHPDEGFDPKALPEVTNINYRDMTAENVTMSASLDGIHKDPF 397
Query: 393 ANICLSNISLSI-NPGSYNSWECSNIHGSSESVFPEPC---PELENSSSN 438
IC+SN+++++ + W C+++ G + V PEPC PE + + N
Sbjct: 398 TGICISNVTIALADKAKKVQWNCTDVAGVTSRVTPEPCSLLPEKKAPAKN 447
>gi|48475087|gb|AAT44156.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 474
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/433 (48%), Positives = 275/433 (63%), Gaps = 28/433 (6%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
PR +S+ FG VGDG+ LNT AF A+ ++ +GGA LYVP+G WLTG FNLTSH
Sbjct: 43 PRGAWMSVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSH 102
Query: 96 LTLFLEKGAVILGSQ--------------------------NPSHWDVVDPLPSYGRGIE 129
+TLFL +GAVI +Q + S W ++DPLPSYGRG E
Sbjct: 103 MTLFLARGAVIRATQAIAMAMSFFYLQDLSSSSCRAFVLDQDTSSWPLIDPLPSYGRGRE 162
Query: 130 LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVV 189
LPG RY SLI+G L+DV +TG+NGTIDGQGSVWWD + ++L ++RPHL+E ISS +V+
Sbjct: 163 LPGGRYMSLIHGDGLQDVFITGENGTIDGQGSVWWDMWRKRTLPFTRPHLLELISSTDVI 222
Query: 190 VSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGH 249
+SN+ F ++P +NIHPVYCSNV I N++V AP +SP T GI PDSS NVCIED I+ G
Sbjct: 223 ISNVVFQDSPFWNIHPVYCSNVVITNVTVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGD 282
Query: 250 DAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYD 309
D IS+KSGWDEYGIA+GRP++ + IRR+ S + A GSE SGG+ NV VE ++ +
Sbjct: 283 DLISIKSGWDEYGIAFGRPSSGITIRRI-TGSGPFAGFAVGSETSGGVENVHVEHLNFFG 341
Query: 310 SLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQIT 369
GI +T GRGG+IR I +S+ L G+ G HPD +DP LP +D +T
Sbjct: 342 MGVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHPDASYDPSKLPVVDGVT 401
Query: 370 FKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPC 429
K++ G NI AG GI+++ F+ ICLSN+ L S W+C + G + V P PC
Sbjct: 402 IKNVWGQNIRQAGLVRGIRDSVFSRICLSNVKL-YGGDSVGPWKCRAVSGGALDVQPSPC 460
Query: 430 PELENSSSNSSST 442
EL ++S S T
Sbjct: 461 AELTSTSEMSFCT 473
>gi|30692538|gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/411 (46%), Positives = 268/411 (65%), Gaps = 1/411 (0%)
Query: 34 LDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLT 93
++ R HS S+TEFG VGDGKT NT AFQ AI L +A GGAQL+VP+GKWLTGSF+LT
Sbjct: 41 MNCRAHSASLTEFGGVGDGKTSNTKAFQTAISKLSQYATDGGAQLFVPAGKWLTGSFSLT 100
Query: 94 SHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDN 153
SH TL+L K +V+L SQ+ + W V+ LPSYGRG + RY SLI G L DV+VTG+N
Sbjct: 101 SHFTLYLHKDSVLLASQDLNEWPVLKALPSYGRGRDAAAGRYSSLIFGTNLTDVIVTGEN 160
Query: 154 GTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHI 213
GTIDGQG WW F + L Y+RP+L+E + S ++ +SNLT LN+P++N+HPVY SN+ +
Sbjct: 161 GTIDGQGEFWWQQFHKKKLKYTRPYLIEIMFSSDIQISNLTLLNSPSWNVHPVYSSNIIV 220
Query: 214 QNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVH 273
Q I++ AP SP T GI PDS N IEDC I G D +++KSGWDEYGI++G PT +
Sbjct: 221 QGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLV 280
Query: 274 IRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD 333
IRR+ S +++A GSEMSGGI +V+ E I ++ + + +T GRG Y++ I +
Sbjct: 281 IRRLTCISPYSATIALGSEMSGGIQDVRAEDIVAINTESAVRIKTAVGRGAYVKDIYVRR 340
Query: 334 AELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
L+ + AF GN GSH D ++D +A P I I ++D++ N+T+A GI + PF
Sbjct: 341 MTLHTMKWAFWMTGNYGSHADGNYDKNAFPEITGINYRDVVAENVTMAARLEGIADHPFT 400
Query: 394 NICLSNISLSI-NPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
IC+SN+++ + W C++I G + V P PC L + ++ C
Sbjct: 401 GICMSNVTIGLAKKAKKQPWTCTDIQGITSGVTPTPCGLLPDQGTDKPGGC 451
>gi|449456478|ref|XP_004145976.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 480
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/433 (47%), Positives = 274/433 (63%), Gaps = 2/433 (0%)
Query: 5 VALLLLLALCSAILINGEVSDGQCDDQ-PTLDPRPHSVSITEFGAVGDGKTLNTLAFQNA 63
++ ++LLAL S + G+ S Q P + R H+ IT+FG VGDG T NT AF+ A
Sbjct: 17 ISAVILLALLSLATVEGKRSCPTNYLQVPAISCRKHTALITDFGGVGDGVTSNTQAFRRA 76
Query: 64 IFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPS 123
I +L S A GGAQL VP GKWLTGSFNLTSH TLF+ K A ILGSQN S W V LPS
Sbjct: 77 IEHLSSLAADGGAQLTVPPGKWLTGSFNLTSHFTLFVHKDAKILGSQNESEWPQVALLPS 136
Query: 124 YGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFI 183
YG G + PG RY SLI G L DVV+TG+NGTIDGQG+ WWD F LN +RP+L+E +
Sbjct: 137 YGVGRDAPGGRYSSLIFGTNLTDVVITGNNGTIDGQGAYWWDKFHKGELNLTRPYLIEIM 196
Query: 184 SSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDC 243
S+ + +S+LT +N+P++ +HP+Y NV IQ +++ AP +SP T GI PDS N IEDC
Sbjct: 197 YSDQIQISDLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNTRIEDC 256
Query: 244 IIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVE 303
I G D I++KSGWD+YGI +G PT D+ I+R+ S + VA GSEMSGGI NV++E
Sbjct: 257 FIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEMSGGIRNVRIE 316
Query: 304 KIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALP 363
++ + + +T +GRGG+++ I + L + F GN SHPDD FDP ALP
Sbjct: 317 NFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDDKFDPAALP 376
Query: 364 AIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN-SWECSNIHGSSE 422
I I ++D++ N+T + GI PF NIC+SN+ + + W C+++ G S
Sbjct: 377 EITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTATPKKLQWNCTDVEGFSS 436
Query: 423 SVFPEPCPELENS 435
V P PC L +
Sbjct: 437 DVVPPPCAPLAKA 449
>gi|242091535|ref|XP_002441600.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
gi|241946885|gb|EES20030.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
Length = 439
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/397 (51%), Positives = 271/397 (68%), Gaps = 3/397 (0%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYL-KSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+S+ FGA GDG+TLNT AF A+ + + +GG LYVP G WLTG FNLTSH+TLF
Sbjct: 38 MSVASFGARGDGQTLNTGAFARAVARIERRRGARGGTLLYVPPGVWLTGPFNLTSHMTLF 97
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
L +GAVI +Q+ S W ++DPLPSYGRG ELPG RY SLI+G L+DV +TG+NGTIDGQ
Sbjct: 98 LARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGNGLQDVFITGENGTIDGQ 157
Query: 160 GSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVH 219
GS+WWD + ++L ++RPHL+E + S +VVVSN+ F ++P +NIHPVYCSNV I N++V
Sbjct: 158 GSLWWDMWKKRTLPFTRPHLLELMYSTDVVVSNVVFQDSPFWNIHPVYCSNVVIANVTVL 217
Query: 220 APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLL 279
AP +SP T GI DSS NVCIED I+ G D IS+KSGWDEYGIA+GRP++ + IRR+
Sbjct: 218 APHDSPNTDGIDLDSSSNVCIEDSYISAGDDLISIKSGWDEYGIAFGRPSSGITIRRI-T 276
Query: 280 QSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI 339
S + A GSE SGG+ NV VE ++L+ GI +T GRGG+IR I +S+ L
Sbjct: 277 GSGPFAGFAVGSETSGGVENVLVEHLNLFGMGVGIHIKTNSGRGGFIRNITVSEVTLNGA 336
Query: 340 NVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
G+ G HPD ++P LP ++ +T K+++G NI AG GI+ + F+NICLSN
Sbjct: 337 RYGLRIAGDVGGHPDASYNPSVLPVVNSVTIKNVLGQNIRQAGLIRGIRNSVFSNICLSN 396
Query: 400 ISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSS 436
+ L S W+C + G++ V P PC EL ++S
Sbjct: 397 VKL-YGSASIGPWKCRAVSGAALDVQPSPCTELASTS 432
>gi|297742322|emb|CBI34471.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/444 (45%), Positives = 288/444 (64%), Gaps = 6/444 (1%)
Query: 5 VALLLLLALCSAILINGEV--SDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQN 62
V + L +A+ + V D C + R +SI +FG VGDGKTLNT AF+
Sbjct: 5 VVWIFLCFAATALFLTRLVLAGDVTCSGIVPMRHRNDVISIKDFGGVGDGKTLNTKAFRA 64
Query: 63 AIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLP 122
AI+ ++ +GG LY+P G +LT SFNLTSH+TL+L K AVI +Q+ W ++ PLP
Sbjct: 65 AIYRIEHLRRRGGTLLYIPPGVYLTESFNLTSHMTLYLSKDAVIRATQDTGSWPLIAPLP 124
Query: 123 SYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEF 182
SYGRG ELPG RY S I+ + DV++TG+NGTIDGQG VWW+ + ++L ++RP+L+E
Sbjct: 125 SYGRGRELPGGRYMSFIHADGVHDVIITGENGTIDGQGEVWWNMWRQRTLQFTRPNLIEL 184
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
I+S N+++SN+ F ++P +NIHPVYC NV +Q +++ AP +SP T GI PDSS NVCIED
Sbjct: 185 INSRNIIISNVIFRDSPFWNIHPVYCRNVVVQFVTILAPHDSPNTDGIDPDSSSNVCIED 244
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQV 302
I+ G D +++KSGWDEYGIAYGRP++ + IRR+ SS + +A GSE SGG+ NV
Sbjct: 245 SYISTGDDLVAVKSGWDEYGIAYGRPSSGITIRRI-TGSSPFAGIAVGSETSGGVQNVFA 303
Query: 303 EKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDAL 362
E I+LY+ GI +T GRGG IR I +S+ + G+ G HPDD+F+P+AL
Sbjct: 304 EHINLYNMGVGIHLKTNIGRGGVIRNITVSNVYMEKARTGIKIAGDVGDHPDDNFNPNAL 363
Query: 363 PAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL--SINPGSYNSWECSNIHGS 420
P + + +D+ G ++ G+ G++ +PF ICLS I+L I PG+ W+CS++ G+
Sbjct: 364 PVVKGVVIRDVWGLDVLQPGSIIGLKNSPFTGICLSKINLHGKIKPGT-APWKCSDVSGA 422
Query: 421 SESVFPEPCPELENSSSNSSSTCF 444
+ V P PC EL + S + F
Sbjct: 423 AVGVSPWPCSELTSPGQTGSCSSF 446
>gi|297817470|ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322456|gb|EFH52877.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 271/406 (66%), Gaps = 1/406 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R HS SITE+G VGDGKTLNT AFQ+A+ +L ++ GGAQL+VP+GKWLTGSFNLTSH
Sbjct: 41 RSHSASITEYGGVGDGKTLNTKAFQSAVDHLSQYSSDGGAQLFVPAGKWLTGSFNLTSHF 100
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL K A++L +Q+ + + ++ LPSYGRG + G R+ SL G L DV++TG+NGTI
Sbjct: 101 TLFLHKDAILLAAQDLNEYPILKALPSYGRGRDAAGGRFASLFFGTNLSDVIITGNNGTI 160
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQGS WW F L Y+RP+L+E + S+ + +SNLTFL++P++NIHPVY SN+ ++ +
Sbjct: 161 DGQGSFWWQKFHGGKLKYTRPYLIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGV 220
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP +SP T GI PDS N IEDC I G D I++KSGWDEYGI++G PT + IRR
Sbjct: 221 TIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRR 280
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S +++A GSEMSGGI +V+ E I Y + +G+ +T GRG +++ I + L
Sbjct: 281 LTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNL 340
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ + F GN +H D +DP ALP I I ++DI+ N+++AG GI PF IC
Sbjct: 341 HTMKWVFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGIC 400
Query: 397 LSNISLSINPGSYNS-WECSNIHGSSESVFPEPCPELENSSSNSSS 441
+SN ++S+ + W CS++ G + V P+PC L+ S +
Sbjct: 401 ISNATISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLLDGQESETKK 446
>gi|356535839|ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/430 (46%), Positives = 276/430 (64%), Gaps = 2/430 (0%)
Query: 5 VALLLLLALCSAILINGEVSDGQCD-DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNA 63
++L+L+L + + V+ + + P ++ R HS +T+FG VGDGKT NT AFQ+A
Sbjct: 16 ISLVLMLGSLNVKVAQCRVASKLVNIEYPAINCRKHSAVLTDFGGVGDGKTSNTKAFQSA 75
Query: 64 IFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPS 123
I L A GGAQL VP GKWLTGSFNLTSH TLFL K AVIL SQ+ S W + LPS
Sbjct: 76 ISKLSRVASDGGAQLIVPPGKWLTGSFNLTSHFTLFLHKDAVILASQDESEWPQLPVLPS 135
Query: 124 YGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFI 183
YGRG + PG R+ SLI G L DVV+TG NGTIDGQGS WWD F LN +RP+++E +
Sbjct: 136 YGRGRDAPGGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKNQLNLTRPYMIEIM 195
Query: 184 SSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDC 243
S+ + +SNLT +N+P++ +HP+Y SN+ I+ +++ AP +SP T GI PDS N IEDC
Sbjct: 196 YSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPVDSPNTDGIDPDSCTNTRIEDC 255
Query: 244 IIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVE 303
I G D +++KSGWDEYGI +G+PT + IRR+ S + +A GSEMSGGI +V+VE
Sbjct: 256 YIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEMSGGIQDVRVE 315
Query: 304 KIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALP 363
I ++ + + +T GRGGY++ I + L + F G+ GSHPD FDP ALP
Sbjct: 316 DITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHPDPAFDPKALP 375
Query: 364 AIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN-SWECSNIHGSSE 422
I I ++D++ TN+T + GI PF IC+SN+S+ ++ W C+++ G +
Sbjct: 376 NITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQWNCTDVAGVTS 435
Query: 423 SVFPEPCPEL 432
+V P C L
Sbjct: 436 NVTPNTCQLL 445
>gi|356567484|ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 442
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/421 (47%), Positives = 283/421 (67%), Gaps = 5/421 (1%)
Query: 24 SDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSG 83
S C + L R +SIT+FG VGDG+TLNT AF+ A++ ++ +GG LYVP G
Sbjct: 24 SAATCSNIVPLRYRSDRISITDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYVPPG 83
Query: 84 KWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM 143
+LT SFNLTSH+TL+L GAVI +Q +W ++ PLPSYGRG ELPG RY S I+G
Sbjct: 84 VYLTESFNLTSHMTLYLAAGAVIKATQELGNWPLIVPLPSYGRGRELPGGRYMSFIHGDG 143
Query: 144 LRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNI 203
L DVV+TG+NGTIDGQG VWW+ + ++L ++RP+LVEF++S+++++SN+ F N+P +NI
Sbjct: 144 LSDVVITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWNI 203
Query: 204 HPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGI 263
HPVYCSNV ++ +++ AP +SP T GI PDSS NVCIED I+ G D +++KSGWDEYGI
Sbjct: 204 HPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 263
Query: 264 AYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG 323
AYGRP+ + IRRV SS + +A GSE SGG+ NV E I+L++ GI +T GRG
Sbjct: 264 AYGRPSYGITIRRV-TGSSPFAGIAIGSETSGGVENVLAEHINLFNMGVGIHIKTNSGRG 322
Query: 324 GYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGN 383
G I+ I ++ + N G+ G HPD+ F+P+ALP + IT K++ G + AG
Sbjct: 323 GLIKNITVAHVYVENARQGIKIAGDVGGHPDEKFNPNALPVVKGITIKNVWGVKVNQAGL 382
Query: 384 FTGIQEAPFANICLSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELENSSSNSSST 442
G++ +PF ++CLS+I+ G + SW+CS++ G + V P PC +L SS +
Sbjct: 383 IHGLRNSPFTDVCLSDINFHGMEGPRSPSWKCSDVFGFAHQVSPWPCSQL---SSQEPGS 439
Query: 443 C 443
C
Sbjct: 440 C 440
>gi|357443849|ref|XP_003592202.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
gi|355481250|gb|AES62453.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
Length = 487
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/405 (47%), Positives = 270/405 (66%), Gaps = 1/405 (0%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGS 89
D P ++ R HS +T+FG VGDGKTLNT AF +AI L +A+ GGAQL VP GKWLTGS
Sbjct: 53 DYPAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGS 112
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
FNLTSH TLFL+K AVIL SQ S W + LPSYGRG E PG R+ SLI G L DV++
Sbjct: 113 FNLTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVII 172
Query: 150 TGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
TG+NGTIDGQGS WWD F + L +RP+++E + S+ + +SNLT +N+P++ +HPVY S
Sbjct: 173 TGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSS 232
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
N+ I +++ AP + P T GI PDSS NV IED I G D I++KSGWDEYGI G+P+
Sbjct: 233 NIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPS 292
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQI 329
++ +RR+ S + VA GSEMSGGI +V++E + ++ + + ++ GRG +++ I
Sbjct: 293 QNIIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDI 352
Query: 330 VISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQE 389
+ +L + F G+ G HPD+ FDP+ALP I I ++D+ N+TIAG GI
Sbjct: 353 FVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISN 412
Query: 390 APFANICLSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELE 433
PF IC+SN+++ ++ W C++I G + +V P+PC L+
Sbjct: 413 DPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLK 457
>gi|242094380|ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
gi|241915903|gb|EER89047.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
Length = 495
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/402 (47%), Positives = 269/402 (66%), Gaps = 3/402 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFA--DKGGAQLYVPSGKWLTGSFNLTS 94
R H+ S+ +FG VGDG T NT AF++A+ +L ++ D GGA LYVP+GKWLTG FNLTS
Sbjct: 57 RAHTASLADFGGVGDGTTSNTAAFRSAVDHLSQYSGEDAGGAMLYVPAGKWLTGPFNLTS 116
Query: 95 HLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
H TLFL AVIL SQ+ + W ++DPLPSYGRG + G R+ SL+ G L DVV+TG+NG
Sbjct: 117 HFTLFLHSDAVILASQDINEWPIIDPLPSYGRGRDKIGGRFASLVGGSNLTDVVITGNNG 176
Query: 155 TIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
TIDGQG++WW F L Y+R +L+E + S+ + +SNLT LN+PA+NIHPVY SN+ +Q
Sbjct: 177 TIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQ 236
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
I++ AP SP T GI PDS +V IEDC I G D +++KSGWDEYGI+YG P+ + I
Sbjct: 237 GITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVI 296
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
RR+ S + + +A GSEMSGGI +V+ E I +S +G+ +T GRG Y++ + +
Sbjct: 297 RRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINSESGVRIKTAVGRGAYVKDVFVRRM 356
Query: 335 ELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFA 393
L + F GN SHPDD +DP+A+P +D I+++D++ T + A GIQ APF
Sbjct: 357 TLTTMKWVFWMTGNYKSHPDDKYDPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFK 416
Query: 394 NICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENS 435
IC++N++ ++ W C+++ G S +V P PC L+ +
Sbjct: 417 GICVANVTADLSKSRKYPWTCADVEGVSVNVSPAPCQPLQGA 458
>gi|255545184|ref|XP_002513653.1| polygalacturonase, putative [Ricinus communis]
gi|223547561|gb|EEF49056.1| polygalacturonase, putative [Ricinus communis]
Length = 473
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/437 (45%), Positives = 277/437 (63%), Gaps = 14/437 (3%)
Query: 3 MPVALLL-----LLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNT 57
+PV L+L L C + I+ +S + R HS +T+FG VGDGKT NT
Sbjct: 16 IPVVLILGSLGSRLGECRNVKISNTIS------YSAISCRKHSAVLTDFGGVGDGKTSNT 69
Query: 58 LAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDV 117
FQ AI L ++ GGAQL +P+GKWLTGSFNLTSH TLFL K AV+L SQ+ + W +
Sbjct: 70 KVFQTAIANLSKYSPDGGAQLIIPAGKWLTGSFNLTSHFTLFLHKEAVLLASQDEAEWPI 129
Query: 118 VDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRP 177
+ PLPSYGRG + G R+ SLI G L+DVV+TG+NGTIDGQG+ WW+ F LN +RP
Sbjct: 130 LPPLPSYGRGRDATGGRFSSLIFGTNLKDVVITGNNGTIDGQGATWWNKFHKGLLNQTRP 189
Query: 178 HLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDN 237
+L+E + S + +SNL +N+P++N+HP Y SNV IQ +++ AP +SP T GI PDS N
Sbjct: 190 YLIELLYSHKIQISNLILINSPSWNVHPTYSSNVLIQGLTILAPVDSPNTDGINPDSCTN 249
Query: 238 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 297
IEDC I G D I++KSGWD+YGI +G PT + IRR+ S +++A GSEMSGGI
Sbjct: 250 TRIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTKKLVIRRLTCISPDSATIALGSEMSGGI 309
Query: 298 SNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDF 357
+V+ E I ++ +GI +T GRG Y++ I + + F G+ GSHPD +
Sbjct: 310 QDVRAEDITAINTQSGIRIKTAAGRGAYVKDIFVRRMNFKTMKYVFWMTGSYGSHPDKGY 369
Query: 358 DPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLS--NISLSINPGSYNSWECS 415
DP+ALP I +I ++DI+ N+T + GI++ PF IC+S NI+L+ P W C+
Sbjct: 370 DPNALPIITRINYRDIVAENVTYSARLEGIEKDPFTGICISNANITLTKKPEKLQ-WNCT 428
Query: 416 NIHGSSESVFPEPCPEL 432
+I G + +V P PC L
Sbjct: 429 DIEGVTSNVNPRPCSLL 445
>gi|255571381|ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
gi|223534031|gb|EEF35751.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 284/407 (69%), Gaps = 2/407 (0%)
Query: 34 LDPRPHSV-SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNL 92
L PR V SI +FG VGDGKT NT F+ A+ Y++ FA+KGG+QL VP G+WLTGSFNL
Sbjct: 70 LLPRREVVRSIVDFGGVGDGKTSNTETFRKAVRYMQRFAEKGGSQLIVPRGRWLTGSFNL 129
Query: 93 TSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGD 152
TS+ TLFLE+GAVILGSQ+P W +++PLPSYGRG E G R+ SLI+G L +V++TG+
Sbjct: 130 TSNFTLFLEEGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGNGLTNVIITGN 189
Query: 153 NGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVH 212
NG+IDGQG +WW+ + +++L ++R HLVE ++S N+++SNLTF N+P + IHPVYCSNV
Sbjct: 190 NGSIDGQGKMWWELWWNRTLEHTRGHLVELMNSHNILISNLTFRNSPFWTIHPVYCSNVV 249
Query: 213 IQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDV 272
++++++ AP +P T GI PDSS NVCIEDC I G D +++KSGWD+YGI RP++ +
Sbjct: 250 VKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKTARPSSHI 309
Query: 273 HIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVIS 332
+RRV + + S V GSEMSGGI NV ++ +H++DS G+ +T GRGGYI I +
Sbjct: 310 IVRRVSGTTPTCSGVGIGSEMSGGIFNVMIQDLHIWDSAAGVRIKTDIGRGGYISNITLH 369
Query: 333 DAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPF 392
+ + + + HPD+ +DP+A+P + ++ ++I N T A GI++APF
Sbjct: 370 NITMERVKIPIRFSRGSNDHPDERWDPNAIPVVKGVSISNVICVNSTKAPVLQGIKDAPF 429
Query: 393 ANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNS 439
IC+ N++L + S SW C + G + VFP PCP+L+N+ S+S
Sbjct: 430 GGICMKNVTL-VGLASSTSWHCEFVSGFANEVFPMPCPQLQNNDSSS 475
>gi|223949035|gb|ACN28601.1| unknown [Zea mays]
Length = 376
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/333 (57%), Positives = 253/333 (75%), Gaps = 6/333 (1%)
Query: 29 DDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTG 88
D Q PRPHSV+ITEFGAVGDG+TLNT+ FQNA+FY++SFADKGGAQLYVP G+WLTG
Sbjct: 32 DHQAPPGPRPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTG 91
Query: 89 SFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVV 148
SFNLTSHLTL+LE+GAVI+G+++ S W +V+PLPSYG+G++LPG R++SLI+GY L DVV
Sbjct: 92 SFNLTSHLTLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVV 151
Query: 149 VTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
+TG+NG IDGQG VWW W S LN+SRP+L+EF+ SE++V+SNLTFLN+PA++IHPVYC
Sbjct: 152 ITGNNGVIDGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYC 211
Query: 209 SNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRP 268
SNV + N+++ ++P T GIVPDS N+CIED I++ H+AISLKSGWD YGI++GRP
Sbjct: 212 SNVKVHNVTIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRP 271
Query: 269 TTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQ 328
T+D+ I RV L SSSG+++AFGSEMSGGIS++ V + ++DS G G +
Sbjct: 272 TSDIRISRVDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSSKGPPEEVLVGIAEELLG 331
Query: 329 IVISDAELYNINVAFGACGNCGSHPDDDFDPDA 361
+++ + E C +H F+ D
Sbjct: 332 VLVEEGE------PEAEAQECPNHRPSSFEKDG 358
>gi|224083446|ref|XP_002307030.1| predicted protein [Populus trichocarpa]
gi|222856479|gb|EEE94026.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/393 (49%), Positives = 279/393 (70%), Gaps = 1/393 (0%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+SI +FG VGDGKT NT AF+ A+ Y++ F ++GGAQL VP G+W+TGSFNLTS+ TLFL
Sbjct: 1 ISIKDFGGVGDGKTSNTEAFRRAMRYVQGFGERGGAQLNVPEGRWVTGSFNLTSNFTLFL 60
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
E+GAVILGSQ+P W +++PLPSYGRG E G R+ SLI+G L +VV+TG+NGTIDGQG
Sbjct: 61 EEGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGDGLANVVITGNNGTIDGQG 120
Query: 161 SVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
+WW+ + +++L ++R HLVE ++S+++++SNLTF N+P + IHP+YCSN+ ++++++ A
Sbjct: 121 KMWWELWWNRTLEHTRGHLVELMNSQDILISNLTFRNSPFWTIHPIYCSNLVVKDMTILA 180
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
P +P T GI PDSS NVCIEDC I G D +++KSGWD+YGI RP++++ IRRV
Sbjct: 181 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIIIRRVSGT 240
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN 340
+ + S V GSEMSGGI NV +E +H++DS G+ +T KGRGGYI I ISD + +
Sbjct: 241 TPTCSGVGIGSEMSGGIFNVTIEDLHVWDSAAGVRIKTDKGRGGYIANITISDITMERVK 300
Query: 341 VAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 400
+ HPD+ +DP A+P + ++ +++ N T A GI++APF IC+ NI
Sbjct: 301 IPIRFSSGSNDHPDERWDPKAVPVVKGVSITNLVSFNSTKAPVLEGIEDAPFGGICMKNI 360
Query: 401 SLSINPGSYNSWECSNIHGSSESVFPEPCPELE 433
SL + S SW C + G + VFP PCP+L+
Sbjct: 361 SL-LGVVSSPSWRCEFVSGFANDVFPTPCPQLQ 392
>gi|356534105|ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 475
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/430 (46%), Positives = 276/430 (64%), Gaps = 2/430 (0%)
Query: 5 VALLLLLALCSAILINGEVSDG-QCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNA 63
++L+L+L + ++ +V G + + ++ R HS +T+FG VGDGKT NT AFQ+A
Sbjct: 15 ISLVLILGSLNVKVVECKVGRGLKNTEYYAINCRKHSAVLTDFGGVGDGKTSNTKAFQSA 74
Query: 64 IFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPS 123
I L +A GGAQL VP GKWLTG FNLTSH TLFL K AVIL SQ S W + LPS
Sbjct: 75 IRKLGQYASDGGAQLIVPPGKWLTGPFNLTSHFTLFLHKDAVILASQVESEWPQLPVLPS 134
Query: 124 YGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFI 183
YGRG + PG R+ SLI G L DVV+TG NGTIDGQGS WWD F LN +RP+++E +
Sbjct: 135 YGRGRDAPGGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKNQLNLTRPYMIEIM 194
Query: 184 SSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDC 243
S+ + +SNLT +N+P++ +HP+Y SN+ I+ +++ AP +SP T GI PDS N IEDC
Sbjct: 195 YSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPVDSPNTDGIDPDSCTNTRIEDC 254
Query: 244 IIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVE 303
I G D +++KSGWDEYGI +G+PT + IRR+ S + +A GSEMSGGI +V+VE
Sbjct: 255 YIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEMSGGIQDVRVE 314
Query: 304 KIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALP 363
I ++ + + +T GRGGY++ I + L + F G+ GSHPD FDP ALP
Sbjct: 315 DITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHPDPAFDPKALP 374
Query: 364 AIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN-SWECSNIHGSSE 422
I I ++D++ TN+T + GI PF IC+SN+S+ ++ W C+++ G +
Sbjct: 375 NITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQWNCTDVAGVTS 434
Query: 423 SVFPEPCPEL 432
+V P C L
Sbjct: 435 NVTPNTCQLL 444
>gi|255541678|ref|XP_002511903.1| polygalacturonase, putative [Ricinus communis]
gi|223549083|gb|EEF50572.1| polygalacturonase, putative [Ricinus communis]
Length = 472
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/408 (47%), Positives = 267/408 (65%), Gaps = 10/408 (2%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R HS SIT+FG VGDG T NT AFQ+AI +L +A GG+QL+VP+GKWLTGSF+LTSH
Sbjct: 50 RAHSASITDFGGVGDGITSNTKAFQDAIAHLSQYATDGGSQLFVPAGKWLTGSFSLTSHF 109
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL K AV+LGSQ+ W ++ PLPSYGRG + RY SLI G L D++VTG+NGTI
Sbjct: 110 TLFLHKDAVLLGSQDLKEWPLLKPLPSYGRGRDAAAGRYSSLIFGTNLTDIIVTGNNGTI 169
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG+ WW F L Y+RP+L+E + S+N+ +SNLT LN+P++N+HPVY SN+ IQ I
Sbjct: 170 DGQGAFWWQQFKKGKLKYTRPYLIEIMYSDNIQISNLTLLNSPSWNVHPVYSSNILIQGI 229
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI P DC I G D +++KSGWDEYGIA+G PT + IRR
Sbjct: 230 TIIAPVTSPNTDGINP---------DCYIISGDDCVAVKSGWDEYGIAFGMPTKQLVIRR 280
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S +++A GSEMSGGI +V+ E I + +G+ +T GRGGY++ I + +
Sbjct: 281 LTCISPYSATIALGSEMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTM 340
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ + AF GN GSH D ++DP+ALP I+ I ++D++ N+++A GI PF IC
Sbjct: 341 HTMKWAFWMTGNYGSHADKNYDPNALPVIEGINYRDMVADNVSMAARLEGISGDPFKQIC 400
Query: 397 LSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
+SN+++ + + W C++I G + V P PC L + + C
Sbjct: 401 ISNVTIGMAAKAKKIPWTCTDIEGITTGVSPRPCDLLPDQGPEKLTAC 448
>gi|194696678|gb|ACF82423.1| unknown [Zea mays]
Length = 335
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 184/282 (65%), Positives = 239/282 (84%)
Query: 29 DDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTG 88
D Q PRPHSV+ITEFGAVGDG+TLNT+ FQNA+FY++SFADKGGAQLYVP G+WLTG
Sbjct: 32 DHQAPPGPRPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTG 91
Query: 89 SFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVV 148
SFNLTSHLTL+LE+GAVI+G+++ S W +V+PLPSYG+G++LPG R++SLI+GY L DVV
Sbjct: 92 SFNLTSHLTLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVV 151
Query: 149 VTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
+TG+NG IDGQG VWW W S LN+SRP+L+EF+ SE++V+SNLTFLN+PA++IHPVYC
Sbjct: 152 ITGNNGVIDGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYC 211
Query: 209 SNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRP 268
SNV + N+++ ++P T GIVPDS N+CIED I++ H+AISLKSGWD YGI++GRP
Sbjct: 212 SNVKVHNVTIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRP 271
Query: 269 TTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
T+D+ I RV L SSSG+++AFGSEMSGGIS++ V + ++DS
Sbjct: 272 TSDIRISRVDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDS 313
>gi|226508288|ref|NP_001151102.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|195644332|gb|ACG41634.1| glycoside hydrolase, family 28 [Zea mays]
gi|219886803|gb|ACL53776.1| unknown [Zea mays]
gi|414864493|tpg|DAA43050.1| TPA: glycoside hydrolase, family 28 [Zea mays]
Length = 463
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/397 (46%), Positives = 262/397 (65%), Gaps = 1/397 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R H +TE+GAVGDG+TLNT AF A+ L A GGA L VP GKWLTG FNLTS
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L++GA IL SQ+ HW ++ PLPSYGRG + PG RY + I G L DV++TG NGTI
Sbjct: 101 TLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGKNGTI 160
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
+GQG VWWD F ++ L ++R HL+E + S+N+++SN+TF++AP +N+HP YC+NV I +
Sbjct: 161 NGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAPYWNLHPTYCTNVTISGV 220
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI PDSS V IEDC I G D +++KSGWDEYGI + P+ + IRR
Sbjct: 221 TILAPVNSPNTDGIDPDSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIRR 280
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S + + +A GSEMSGGI +V+ E ++ + + ++ GRGG++R I + L
Sbjct: 281 LTCVSPTSAMIALGSEMSGGIRDVRAEDSVAINTESAVRVKSGAGRGGFVRDIFVRGLSL 340
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ + F GN G HPD+ DP+A+P + I + D+ N+T+AG GI + P+ IC
Sbjct: 341 HTMKWVFWMTGNYGQHPDNTSDPNAMPEVTGINYSDVFAENVTMAGRMEGIPKDPYTGIC 400
Query: 397 LSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPEL 432
+SN++ + P + W C+N+ G + V P+PCPEL
Sbjct: 401 ISNVTARLAPDAKELQWNCTNVKGVTSHVSPKPCPEL 437
>gi|15236514|ref|NP_194081.1| putative polygalacturonase [Arabidopsis thaliana]
gi|3451075|emb|CAA20471.1| putative protein [Arabidopsis thaliana]
gi|7269198|emb|CAB79305.1| putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis thaliana]
gi|62320484|dbj|BAD95012.1| hypothetical protein [Arabidopsis thaliana]
gi|332659368|gb|AEE84768.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 495
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/408 (47%), Positives = 267/408 (65%), Gaps = 1/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R +S S+ EFGAVGDG T NT AF++A+ L FAD GG+ L+VP+G+WLTG+FNLTSH
Sbjct: 64 RAYSASLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTGNFNLTSHF 123
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL + AVIL SQ S ++V++PLPSYGRG + G R+ SL+ G L DVV+TG+NGTI
Sbjct: 124 TLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVVITGENGTI 183
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG WW F L Y+RP+L+E + S+ + +SNLTFLN+P+++IHPVY SN++IQ +
Sbjct: 184 DGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYSSNIYIQGL 243
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP P T GI PDS N IEDC I G D I++KSGWD+YGI YG PT + IRR
Sbjct: 244 TILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRR 303
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S + +A GSEMSGGI +V+ E I +S +GI +T GRGGY++ + + +
Sbjct: 304 LTCISPDSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTM 363
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ F G+ GSHPDD +DP ALP I I ++D++ N+T+ GI F IC
Sbjct: 364 MTMKYVFWMTGSYGSHPDDHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGIC 423
Query: 397 LSNISLSINPGSYNS-WECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
+SN++++++ W C+++ G + V P+PC L + C
Sbjct: 424 ISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPEKQPGTVVPC 471
>gi|224075086|ref|XP_002304552.1| predicted protein [Populus trichocarpa]
gi|222841984|gb|EEE79531.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/408 (49%), Positives = 284/408 (69%), Gaps = 4/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R +SI +FG VGDGKTLNT AF+ A++ ++ +GG LY+P G +LT SFNLTSH+
Sbjct: 4 RNDKISIADFGGVGDGKTLNTKAFREAVYRIQHLRRRGGTLLYIPPGVYLTESFNLTSHM 63
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L +GAVI +Q+ +W ++ PLPSYGRG E G RY S I+G L+DV++TG+NGTI
Sbjct: 64 TLYLARGAVIKATQDTGNWPLIAPLPSYGRGRERLGGRYMSFIHGDGLQDVIITGENGTI 123
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG VWW+ + ++L ++RP+LVEF++S +++SN+ F N+P +NIHPVY NV I+ +
Sbjct: 124 DGQGDVWWNMWRQRTLLFTRPNLVEFVNSRGIIISNVIFRNSPFWNIHPVYSRNVVIRYV 183
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP +SP T GI PDSS NVCIED I+ G D +++KSGWDEYGIAYGRP++D+ IRR
Sbjct: 184 TILAPLDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIRR 243
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ SS S +A GSE SGG+ NV VE ++LY+ GI +T GRGG+I+ I ++D +
Sbjct: 244 I-TGSSPFSGIAVGSETSGGVKNVLVENVNLYNMGVGIHIKTNIGRGGFIKNITVTDVYM 302
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
N+ G+ G HPDD F+P+ALP + IT K I G + G+ G++ +PF IC
Sbjct: 303 ENVRKGIKIAGDVGDHPDDSFNPNALPVVYGITLKSIWGEKVQQPGSIQGLKNSPFTGIC 362
Query: 397 LSNISLSINPGSYNS-WECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
LSNI+L PG +S W+CS++ GS+ V P PC EL +S + + +C
Sbjct: 363 LSNINLHGVPGPRSSPWKCSDVSGSALLVSPWPCSEL--TSPHQTGSC 408
>gi|297803786|ref|XP_002869777.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315613|gb|EFH46036.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/408 (46%), Positives = 266/408 (65%), Gaps = 1/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R +S S+ EFGAVGDG T NT AF++A+ L FAD GG+ L+VP+G+WLTGSFNLTSH
Sbjct: 63 RAYSASLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTGSFNLTSHF 122
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL + AVIL SQ S ++V++PLPSYGRG + G R+ SL+ G L DVV+TG+NGTI
Sbjct: 123 TLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVVITGENGTI 182
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG WW F L Y+RP+L+E + S+ + +SNLTFLN+P+++IHPVY N+ IQ++
Sbjct: 183 DGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYSRNIFIQSL 242
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP P T GI PDS N IEDC I G D I++KSGWD+YGI YG PT + IRR
Sbjct: 243 TILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRR 302
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S + +A GSEMSGGI +V+ E I +S +GI +T GRGGY++ + + +
Sbjct: 303 LTCISPDSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTM 362
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ F G+ GSHPD+ +DP ALP I I ++D++ N+T+ GI F IC
Sbjct: 363 NTMKYVFWMTGSYGSHPDEHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGIC 422
Query: 397 LSNISLSINPGSYNS-WECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
+SN++++++ W C+++ G + V P+PC L + C
Sbjct: 423 ISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPEKQPGTVVPC 470
>gi|255537765|ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223549848|gb|EEF51336.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/429 (47%), Positives = 288/429 (67%), Gaps = 4/429 (0%)
Query: 15 SAILINGEVSDG--QCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFAD 72
S ++I V+ G C + R +SI +FG VGDGKT+NT AF+ AI+ ++
Sbjct: 14 SILMIYSTVAHGVETCSGIVPMRYRNDKISIADFGGVGDGKTVNTKAFRAAIYRIQHLKR 73
Query: 73 KGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPG 132
+GG LY+P G +LTGSFNLTSH+TL+L +GAVI +Q+ +W ++ PLPSYGRG E G
Sbjct: 74 RGGTLLYIPPGVFLTGSFNLTSHMTLYLARGAVIKATQDTWNWPLIAPLPSYGRGRERLG 133
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSN 192
RY S I+G L DVV+TG+NGTIDGQG +WW+ + ++L ++RP+LVEF++S +++SN
Sbjct: 134 GRYMSFIHGDGLHDVVITGENGTIDGQGDIWWNMWRQRTLQFTRPNLVEFLNSRGIIISN 193
Query: 193 LTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAI 252
+ F N+P +NIHPVYCSNV I+ +++ AP +SP T GI PDSS NVCIED I+ G D +
Sbjct: 194 VIFQNSPFWNIHPVYCSNVVIRFVTILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLV 253
Query: 253 SLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN 312
++KSGWDEYGIAYGRP++ + IRR+ SS + +A GSE SGG+ +V E I+LYD
Sbjct: 254 AVKSGWDEYGIAYGRPSSHITIRRI-TGSSPFAGIAVGSETSGGVEHVLAENINLYDMGV 312
Query: 313 GIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKD 372
G+ +T GRGG+IR I SD + N G+ G HPDD+++P+ALP + I F+
Sbjct: 313 GLHVKTNIGRGGFIRNITFSDVYMKNARKGIKIAGDVGDHPDDNYNPNALPVVKGIIFRG 372
Query: 373 IIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNS-WECSNIHGSSESVFPEPCPE 431
+ G N+ G G++ +PF ICLSNI+L PG ++ W+CS++ G++ V P PC E
Sbjct: 373 VWGENVLQPGAIQGLKSSPFTGICLSNINLHGVPGPRSTPWKCSDVSGAALEVSPFPCSE 432
Query: 432 LENSSSNSS 440
L + S
Sbjct: 433 LATTHQTGS 441
>gi|186701252|gb|ACC91278.1| glycoside hydrolase family 28 protein [Capsella rubella]
Length = 494
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/408 (46%), Positives = 264/408 (64%), Gaps = 1/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R +S S+ EFGAVGDG T NT AF++A+ L F D GG+ L+VP+G+WLTG+FNLTSH
Sbjct: 63 RAYSASLDEFGAVGDGVTSNTKAFRDAVSQLSRFEDYGGSLLFVPAGRWLTGNFNLTSHF 122
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL + AVIL SQ S ++V++PLPSYGRG + G R+ SL+ G L DVV+TG+NGTI
Sbjct: 123 TLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVVITGENGTI 182
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG WW F L Y+RP+L+E + S+ + +SNLTFLN+P+++IHPVY N+ IQ +
Sbjct: 183 DGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYSRNIFIQGL 242
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP P T GI PDS N IEDC I G D I++KSGWD+YGIAYG PT + IRR
Sbjct: 243 TILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGIAYGMPTKQLLIRR 302
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S + +A GSEMSGGI +V+ E I DS +GI +T GRGGY++ + + +
Sbjct: 303 LTCISPDSAVIALGSEMSGGIEDVRAEDIVAIDSESGIRIKTAIGRGGYVKDVYVRGMTM 362
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ F G+ GSHPD+ +DP ALP I I ++D++ N+T+ GI F IC
Sbjct: 363 KTMKYVFWMTGSYGSHPDEHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGIC 422
Query: 397 LSNISLSINPGSYNS-WECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
+SN++++++ W C+++ G + V P PC L + C
Sbjct: 423 ISNVTITLSKKPKKVLWNCTDVSGYTSGVTPAPCQLLPEKQPGTVVPC 470
>gi|449459262|ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 472
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/405 (48%), Positives = 284/405 (70%), Gaps = 3/405 (0%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+SIT+FG VGDGKT NT AF+ AI Y++ F DKGG++L VP G W+TGSFNLTS+ TLFL
Sbjct: 70 MSITDFGGVGDGKTSNTEAFRKAIQYMRRFGDKGGSKLTVPKGSWVTGSFNLTSNFTLFL 129
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
++GA+IL SQ+P W +++PLPSYGRG E G R+ SLI+G L +VV+TG+NGTIDGQG
Sbjct: 130 QRGALILASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNALSNVVITGENGTIDGQG 189
Query: 161 SVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
+WW+ + +++LN++R HLVE I+S N+++SNLTF N+P + IHPVYCSNV I+++++ A
Sbjct: 190 KMWWELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPVYCSNVVIKDMTILA 249
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
P +P T GI PDSS NVCIEDC I G D +++KSGWD+YGI RP++++ IRRV
Sbjct: 250 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGT 309
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN 340
+ + S V GSEMSGGISN+ +E ++++DS GI ++ +GRGGYI + I++ + +
Sbjct: 310 TPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVK 369
Query: 341 VAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 400
+A HPD+ FDP A+P + I +++ N T A GI + +C+ N+
Sbjct: 370 MAIRFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYGIAGTSYDGVCMKNV 429
Query: 401 S-LSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTCF 444
+ L + P + W C+ + G S SVFP PCP+L+N++ +S + F
Sbjct: 430 TILGLTPSA--KWHCAFVSGFSTSVFPTPCPQLQNTTFSSLCSSF 472
>gi|356554060|ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 446
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/437 (47%), Positives = 290/437 (66%), Gaps = 5/437 (1%)
Query: 8 LLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYL 67
LL+ C +L+ GE C + L R ++SITEFG VGDG+TLNT AF+ AI+ +
Sbjct: 10 LLVCFSCCWLLVLGEGETASCSNIVALGHRTDNISITEFGGVGDGRTLNTKAFREAIYRV 69
Query: 68 KSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRG 127
+ +GG LYVP G +LT FNLTSH+TL+L GAVI+ +Q+ +W ++ PLPSYGRG
Sbjct: 70 QHLPREGGTLLYVPPGVYLTEPFNLTSHMTLYLAAGAVIMATQDSLNWPLIAPLPSYGRG 129
Query: 128 IELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSEN 187
E PG RY S I+G ++DVV+TG+NGTIDGQG WW+ + +L ++RP+LVEF++S +
Sbjct: 130 RERPGGRYMSFIHGDGVQDVVITGENGTIDGQGDAWWNKWRQGTLQFTRPNLVEFVNSRD 189
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAM 247
+++SN+ F N+P +NIHPVYCSNV ++ +++ AP +SP T GI PDSS NVCIED I+
Sbjct: 190 IIISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYIST 249
Query: 248 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 307
G D +++KSGWDEYGIAYGRP++D+ IRR+ SS + +A GSE SGG+ NV E I+L
Sbjct: 250 GDDLVAVKSGWDEYGIAYGRPSSDITIRRI-TGSSPFAGIAIGSETSGGVENVLAEHINL 308
Query: 308 YDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQ 367
Y+ GI +T GRGG+I+ I +S + G+ G HPDD FD +ALP +
Sbjct: 309 YNMGIGIHIKTNTGRGGFIKNITMSHVYMEEARKGIRISGDVGDHPDDKFDANALPLVKG 368
Query: 368 ITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN-SWECSNIHGSSESVFP 426
+T K++ G + AG G++ +PF +ICL +I+L G W+CS++ G + V P
Sbjct: 369 VTIKNVWGMKVLQAGLIQGLRNSPFTDICLYDINLHGVTGPRTPPWKCSDVSGFAHQVSP 428
Query: 427 EPCPELENSSSNSSSTC 443
PC EL SSN +C
Sbjct: 429 WPCSEL---SSNQQGSC 442
>gi|115474399|ref|NP_001060796.1| Os08g0107300 [Oryza sativa Japonica Group]
gi|42408232|dbj|BAD09389.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
Japonica Group]
gi|113622765|dbj|BAF22710.1| Os08g0107300 [Oryza sativa Japonica Group]
Length = 482
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/403 (46%), Positives = 266/403 (66%), Gaps = 1/403 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R S S+ EFGAVGDG T NT AF+ A+ L++ A GGA+L VP G+W+TGSFNLTS
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL GA+ILGSQ+P W ++ PLPSYGRG E G R+ SLI+G L DVV+TG+NGTI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG +WWD + +++LN++R HL+E + S N+++SN+T N+P + +HPVYC NV I+N+
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+V AP +P T GI PDSS VCIEDC I G D +++KSGWD+YGI+ G+P++++ I+R
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V + + S V FGSEMSGGISNV + +H+++S + +T GRGGYI I I + +
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ V H DD +D ALP I + +D++G ++ A + A + IC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 397 LSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNS 439
N+SL++ + W C +++G + V P PC E + S+S
Sbjct: 436 FRNVSLTVIK-RQDRWHCESVYGEAHDVLPAPCEEFRRNGSSS 477
>gi|356530824|ref|XP_003533980.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/427 (46%), Positives = 274/427 (64%), Gaps = 4/427 (0%)
Query: 8 LLLLALCSAILINGEVSDG-QCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFY 66
+LLL L ++ V++G C + P + R HS +T+FG VGDGKT NT AFQ AI
Sbjct: 19 VLLLGLQGVRVVECRVANGLDCFEYPAISCRKHSAVLTDFGGVGDGKTSNTKAFQYAISN 78
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
L +A GGA L VP GKWLTGSFNLTSH TLFL+K A ILGSQ+ S W + LPSYGR
Sbjct: 79 LSHYASDGGALLVVPPGKWLTGSFNLTSHFTLFLQKEATILGSQDESEWPTLPVLPSYGR 138
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSE 186
G + P R+ SLI G L DVV+TG NGTIDGQGS WWD F L +RP+++E + S+
Sbjct: 139 GRDAPDGRFSSLIFGTNLTDVVITGYNGTIDGQGSYWWDKFHKGELKLTRPYMIEIMFSD 198
Query: 187 NVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIA 246
++ +SNLT +++P++ +HP+Y S++ IQ +++ AP +SP T GI PDS N IEDC I
Sbjct: 199 HIQISNLTLIDSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGINPDSCSNTRIEDCYIV 258
Query: 247 MGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIH 306
G D +++KSGWDE GI +G P+ + IRR+ S + +A GSEMSGGI +V+ E++
Sbjct: 259 SGDDCVAIKSGWDESGIKFGMPSQHIIIRRLECVSPDSAMIALGSEMSGGIRDVRAEELT 318
Query: 307 LYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAID 366
++ + + +T GRG Y+R I + L + F G+ GSHP+ DFDP ALP I
Sbjct: 319 ALNTQSAVRIKTAVGRGAYVRDIFVKGMNLNTMKYVFWMTGSYGSHPNTDFDPKALPNIT 378
Query: 367 QITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN-SWECSNIHGSSESVF 425
I ++D+I N+T + GI PF IC+SN+ +I+ G W C++I G + +V+
Sbjct: 379 GINYRDVIADNVTYSARLEGIANDPFTGICISNV--TIHSGKKKPQWNCTDIEGVTSNVY 436
Query: 426 PEPCPEL 432
P+PC L
Sbjct: 437 PKPCELL 443
>gi|358248902|ref|NP_001240215.1| uncharacterized protein LOC100785005 precursor [Glycine max]
gi|255635243|gb|ACU17976.1| unknown [Glycine max]
Length = 477
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/426 (45%), Positives = 270/426 (63%), Gaps = 2/426 (0%)
Query: 8 LLLLALCSAILINGEVSDG-QCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFY 66
+LLL L ++ V++G C + P + R HS +T+FG VGDGKT NT AFQ AI
Sbjct: 19 VLLLGLQGVRVVECRVANGLDCFEYPAISCRKHSAVLTDFGGVGDGKTSNTKAFQYAISN 78
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
L +A GGA L VP GKWLTGSFNLTSH TLFL+K A ILGSQ+ S W + LPSYGR
Sbjct: 79 LSHYASDGGALLVVPPGKWLTGSFNLTSHFTLFLQKEATILGSQDESEWPTLPVLPSYGR 138
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSE 186
G + P R+ SLI G L DV++TG NGTIDGQG WWD F L +RP+++E + S+
Sbjct: 139 GRDAPDGRFSSLIFGTNLTDVIITGYNGTIDGQGCYWWDKFHKGELKLTRPYMIEIMFSD 198
Query: 187 NVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIA 246
++ +SNLT +N+P++ +HP+Y S++ IQ +++ AP +SP T GI PDS N+ IEDC I
Sbjct: 199 HIQISNLTLINSPSWFVHPIYTSDIIIQGLTILAPVDSPNTDGIDPDSCSNIRIEDCYIV 258
Query: 247 MGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIH 306
G D +++KSGWDEYGI +G P+ + IRR+ S + +A GSEMSGGI +V+ E +
Sbjct: 259 SGDDCVAIKSGWDEYGIKFGMPSQHIIIRRLECVSPDSAMIALGSEMSGGIQDVRAEDLT 318
Query: 307 LYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAID 366
++ + + +T GRG Y+R I I L + F G+ SHPD+ FDP LP I
Sbjct: 319 AINTQSAVRIKTAVGRGAYVRDIFIKGMNLNTMKYVFWMTGSYSSHPDNGFDPKTLPNIT 378
Query: 367 QITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFP 426
I ++D+I N+T + GI PF IC+SN+++ W C++I G + +V+P
Sbjct: 379 GINYRDVIAENVTYSARLEGIANDPFTGICISNVTIHSGKKKLQ-WNCTDIEGVTSNVYP 437
Query: 427 EPCPEL 432
+PC L
Sbjct: 438 KPCELL 443
>gi|125559874|gb|EAZ05322.1| hypothetical protein OsI_27527 [Oryza sativa Indica Group]
Length = 482
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/403 (46%), Positives = 266/403 (66%), Gaps = 1/403 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R S S+ EFGAVGDG T NT AF+ A+ L++ A GGA+L VP G+W+TGSFNLTS
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL GA+ILGSQ+P W ++ PLPSYGRG E G R+ SLI+G L DVV+TG+NGTI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG +WWD + +++LN++R HL+E + S N+++SN+T N+P + +HPVYC NV I+N+
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+V AP +P T GI PDSS VCIEDC I G D +++KSGWD+YGI+ G+P++++ I+R
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V + + S V FGSEMSGGISNV + +H+++S + +T GRGGYI I I + +
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ V H DD +D ALP I + +D++G ++ A + A + IC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 397 LSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNS 439
N+SL++ + W C +++G + V P PC E + S+S
Sbjct: 436 FRNVSLTVIK-RQDRWHCESVYGEAHDVLPAPCEEFRRNGSSS 477
>gi|125601928|gb|EAZ41253.1| hypothetical protein OsJ_25761 [Oryza sativa Japonica Group]
Length = 482
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/403 (46%), Positives = 266/403 (66%), Gaps = 1/403 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R S S+ EFGAVGDG T NT AF+ A+ L++ A GGA+L VP G+W+TGSFNLTS
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL GA+ILGSQ+P W ++ PLPSYGRG E G R+ SLI+G L DVV+TG+NGTI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG +WWD + +++LN++R HL+E + S N+++SN+T N+P + +HPVYC NV I+N+
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+V AP +P T GI PDSS VCIEDC I G D +++KSGWD+YGI+ G+P++++ I+R
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V + + S V FGSEMSGGISNV + +H+++S + +T GRGGYI I I + +
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ V H DD +D ALP I + +D++G ++ A + A + IC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 397 LSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNS 439
N+SL++ + W C +++G + V P PC E + S+S
Sbjct: 436 FRNVSLTVIK-RQDRWHCESVYGEAHDVLPAPCEEFRRNGSSS 477
>gi|449452247|ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
gi|449501789|ref|XP_004161459.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 445
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/404 (50%), Positives = 281/404 (69%), Gaps = 4/404 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R +SI +FG +GDG+TLNT AF+ AI+ ++ +GG LY+P G +LT +FNLTSH+
Sbjct: 37 RNDKISIADFGGIGDGRTLNTRAFRAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHM 96
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L KGAVI Q+ S+W V+ PLPSYGRG E PG RY SLI+G + DVV+TG+NGTI
Sbjct: 97 TLYLAKGAVIKAVQDSSNWPVIAPLPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTI 156
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG WW+ + + +L Y+RP LVEF++S N+++SN+ FLN+P +NIHPVYC NV ++ +
Sbjct: 157 DGQGDAWWNMWRTGTLKYTRPSLVEFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYV 216
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP +SP T G+ PDSS+NVCIED I+ G D +++KSGWDEYGIAYGR + D+ IRR
Sbjct: 217 TILAPRDSPNTDGVDPDSSNNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRR 276
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ SS + VA GSE SGG++NV E ++ YD GI +T GRGG+I+ I +S+ +
Sbjct: 277 I-SGSSPFAGVAVGSEASGGVANVLAEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYM 335
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
N G+ G HPDD FDP+ALP + IT K+I G N+ AG+ G++++PF IC
Sbjct: 336 ENSRKGLKIAGDAGDHPDDKFDPNALPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGIC 395
Query: 397 LSNISL--SINPGSYNSWECSNIHGSSESVFPEPCPELENSSSN 438
LSNI+L + P S W CS + G++ V P PC EL ++ +
Sbjct: 396 LSNINLRGATRPRSV-PWTCSYVSGAASLVSPWPCSELTSTDQD 438
>gi|242042413|ref|XP_002468601.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
gi|241922455|gb|EER95599.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
Length = 463
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/397 (46%), Positives = 263/397 (66%), Gaps = 1/397 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R H +TE+GAVGDG+TLNT AF A+ L A GGA L VP GKWLTG FNLTS
Sbjct: 41 RKHVAKVTEYGAVGDGRTLNTGAFAKAVADLSHRARDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L++GA IL SQ+ +HW ++ PLPSYGRG + PG RY + I G L DV++TG NGTI
Sbjct: 101 TLYLDEGAEILASQDMNHWPLIAPLPSYGRGRDEPGPRYINFIGGSNLTDVIITGKNGTI 160
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
+GQG VWWD F ++ L +R HL+E + S+N+++SN+TF++AP +N+HP YC+NV I +
Sbjct: 161 NGQGQVWWDKFHAKELKSTRGHLLELLHSDNIIISNVTFVDAPYWNLHPTYCTNVTISGV 220
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI PDSS +V IEDC I G D +++KSGWDEYGI + P+ + IRR
Sbjct: 221 TILAPLNSPNTDGIDPDSSTHVKIEDCYIVSGDDCVAVKSGWDEYGIKFNMPSQHIVIRR 280
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S + + +A GSEMSGGI +V+ E ++ + + ++ GRGG+++ I + L
Sbjct: 281 LTCISPTSAMIALGSEMSGGIRDVRAEDNIAINTESAVRIKSGAGRGGFVKDIFVRGLSL 340
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ + F GN G HPD+ +P+A+P + I + D+ N+T AG GI P+ IC
Sbjct: 341 HTMKWVFWMTGNYGQHPDNTSNPNAMPEVTGINYSDVFAENVTTAGRMEGIPNDPYTGIC 400
Query: 397 LSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPEL 432
+SN++ S+ P + W C+N+ G + +V P+PCPEL
Sbjct: 401 ISNVTASLAPNATELQWNCTNVKGVTSNVSPKPCPEL 437
>gi|357114278|ref|XP_003558927.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 462
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/398 (46%), Positives = 263/398 (66%), Gaps = 2/398 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYL-KSFADKGGAQLYVPSGKWLTGSFNLTSH 95
R H ITE+GAVGDGKTLNT AF A+ L + AD GGA L VP GKWLTG FNLTSH
Sbjct: 39 RKHVKRITEYGAVGDGKTLNTAAFARAVADLSRRAADGGGAALVVPEGKWLTGPFNLTSH 98
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
TLFL +GA IL SQ+ + W ++ PLPSYGRG + PG RY + I G L DV++TG NGT
Sbjct: 99 FTLFLHRGAEILASQDLNDWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGQNGT 158
Query: 156 IDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
I+GQG VWWD + ++ L Y+R +L+E + S ++++SN+TF++AP++N+HP YC+NV I
Sbjct: 159 INGQGQVWWDKYHAKELTYTRGYLLELLYSHDIIISNVTFVDAPSWNLHPTYCTNVTISG 218
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
+++ AP SP T GI PDSS V IEDC I G D I++KSGWDEYGI + P+ + +R
Sbjct: 219 VTILAPVHSPNTDGIDPDSSSYVKIEDCYIVSGDDCIAVKSGWDEYGIKFNMPSQHIVVR 278
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
R+ S + + +A GSEMSGGI +V+ E ++ + + ++ GRGG+++ + +
Sbjct: 279 RLTCISPTSAMIALGSEMSGGIQDVRAEDNIAINTESAVRIKSGVGRGGFVKDVFVRGLS 338
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
L+ + F GN G HPD+ +P ALP + I ++D+ N+T+AG GI P+ I
Sbjct: 339 LHTMKWVFWMTGNYGQHPDNSSNPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTGI 398
Query: 396 CLSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPEL 432
C+SN++ + P + W C+++ G + V P+PCPEL
Sbjct: 399 CMSNVTAQLAPDAKKLQWNCTDVKGVASGVSPKPCPEL 436
>gi|242077899|ref|XP_002443718.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
gi|241940068|gb|EES13213.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
Length = 497
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/403 (46%), Positives = 268/403 (66%), Gaps = 1/403 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R + S+ EFGAVGDG T NT AF+ A+ L++ A GGA+L VP G+WLTGSFNLTS
Sbjct: 91 RAVTASVEEFGAVGDGATPNTAAFRRAVAELEARAGAGGARLEVPPGRWLTGSFNLTSRF 150
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL +GAVILGSQ+P W ++ PLPSYGRG E G R+ SLI+G L DVV+TG NGTI
Sbjct: 151 TLFLHRGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTI 210
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG++WW+ + +++LN++R HL+E ++S N+++S++T N+P + +HPVYCSNV ++++
Sbjct: 211 DGQGNMWWELWWNRTLNHTRGHLIELVNSTNILISSITLRNSPFWTVHPVYCSNVVMKDL 270
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP +P T GI PDSS VCIEDC I G D +++KSGWD+YGI+ G+P+T++ I+R
Sbjct: 271 TILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISLGKPSTNIVIQR 330
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V + + S V FGSEMSGGISNV V +H+++S + +T GRGGYI I IS+ +
Sbjct: 331 VSGTTPTCSGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTM 390
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ V H DD++D ALP I + D++G ++ A + A + IC
Sbjct: 391 EKVKVPIRFSRGADDHSDDNYDRTALPRISNVLISDVVGVDLQRAPMLEAVPGAVYEEIC 450
Query: 397 LSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNS 439
N SL + W C +++G + VFP PC E + S+S
Sbjct: 451 FRNFSLR-GIRRQDRWHCESVYGEAHEVFPAPCEEFRKNGSSS 492
>gi|225464581|ref|XP_002273669.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 478
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/443 (44%), Positives = 284/443 (64%), Gaps = 12/443 (2%)
Query: 2 KMPVALLLLLALCSAILINGEVSDGQCDDQPTLDP--------RPHSVSITEFGAVGDGK 53
+ P AL ++LA+ L++ V+ +C ++P R HS +T+FGA GDGK
Sbjct: 8 RKPHALGIVLAVLILGLLSFRVA--ECQTSSFMEPIKYKALRCRKHSAVLTDFGATGDGK 65
Query: 54 TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPS 113
T+NT AF++AI +L FAD GGA+L VP GKWLTGSFNLTSH TL+++K AVILG+Q+ S
Sbjct: 66 TINTKAFKSAIDHLSQFADDGGAELIVPPGKWLTGSFNLTSHFTLYIDKDAVILGAQDES 125
Query: 114 HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLN 173
+ +++ LPSYG G + G R+ SLI G L DVV+TG NGT++GQG WWD F ++ N
Sbjct: 126 AYPLIEVLPSYGVGRD-GGGRHSSLIFGTNLTDVVITGGNGTLNGQGKYWWDKFRAKKYN 184
Query: 174 YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPD 233
+RP+L+E + S +V +SNLT +++P++N+HPVY NV ++++++ AP +SP T GI PD
Sbjct: 185 DTRPYLIEIMYSNHVQISNLTLIDSPSWNVHPVYSRNVLVKDLTILAPIDSPNTDGINPD 244
Query: 234 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 293
S V IEDC I G D I++KSGWD+YG +G PT D+ IRR+ S +++A GSEM
Sbjct: 245 SCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDSATIALGSEM 304
Query: 294 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHP 353
SGGI NV E I D+ +GI +T GRGGY++ I + + + F G+ GSHP
Sbjct: 305 SGGIKNVWAEDITAIDTQSGIRIKTGIGRGGYVKDIYVRRMTVKTMKYVFWITGDYGSHP 364
Query: 354 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN-SW 412
DD +DP ALP I I ++D++ N+T + GI PF IC+SN+++ + W
Sbjct: 365 DDGWDPKALPVIKNINYRDMVAENVTYSARLDGISGDPFTGICISNVTIGLTEKPKELQW 424
Query: 413 ECSNIHGSSESVFPEPCPELENS 435
C+N+ G + V P C L S
Sbjct: 425 NCTNVAGVTSQVTPRSCDLLPPS 447
>gi|125526876|gb|EAY74990.1| hypothetical protein OsI_02888 [Oryza sativa Indica Group]
Length = 445
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/390 (51%), Positives = 270/390 (69%), Gaps = 2/390 (0%)
Query: 53 KTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNP 112
+TL+T AFQ A+ ++ GGA LYVP G WLTG FNLTSH+TLFL +GAVI +Q+
Sbjct: 55 RTLSTAAFQAAVASIERRRAPGGALLYVPPGVWLTGPFNLTSHMTLFLARGAVIRATQDT 114
Query: 113 SHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSL 172
S W +++PL SYGRG ELPG RY SLI+G L+DVV+TGDNGTIDGQGS WWD + +L
Sbjct: 115 SSWPLIEPLLSYGRGRELPGGRYMSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTL 174
Query: 173 NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVP 232
++RPHL+E ++S +VVVSN+ F ++P +NIHPVYCSNV I+N++V AP +SP T GI P
Sbjct: 175 PFTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDP 234
Query: 233 DSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSE 292
DSS NVCIEDC I+ G D I++KSGWDEYG+AYGRP++ + IRR+ SS + A GSE
Sbjct: 235 DSSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRI-TGSSPFAGFAVGSE 293
Query: 293 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSH 352
SGG+ +V E ++ + S GI +T GRGG+IR + +SD L ++ G+ G H
Sbjct: 294 TSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGH 353
Query: 353 PDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSW 412
PDD +D +ALP +D +T K++ G NI AG+ GI + F+ ICLSN+ L+ + W
Sbjct: 354 PDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLN-GGAAVRPW 412
Query: 413 ECSNIHGSSESVFPEPCPELENSSSNSSST 442
+C + G++ V P PC EL ++S S T
Sbjct: 413 KCEAVSGAALDVQPSPCTELTSTSGMSFCT 442
>gi|15238207|ref|NP_199002.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|10177371|dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis thaliana]
gi|332007355|gb|AED94738.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/446 (46%), Positives = 288/446 (64%), Gaps = 12/446 (2%)
Query: 2 KMPVALLLLLALCSAILINGEVSDG---QCDDQPTLDPRPHSVSITEFGAVGDGKTLNTL 58
+ P+++ +L L + ++ +S G C + R +SI++FGAVGDGKTLNT
Sbjct: 5 QAPISVFVLFLLST--VLPHHLSLGAPITCSGIVPMKHRNEMLSISDFGAVGDGKTLNTK 62
Query: 59 AFQNAIFYLKSFADKG-GAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDV 117
AF +AI +++ + G LYVP G +LT SFNLTSH+TL+L GAVI Q+ W +
Sbjct: 63 AFNSAIDRIRNSNNSNEGTLLYVPRGVYLTQSFNLTSHMTLYLADGAVIKAVQDTEKWPL 122
Query: 118 VDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRP 177
DPLPSYGRG E PGRRY S I+G L DVV+TG NGTIDGQG WW+ + +L ++RP
Sbjct: 123 TDPLPSYGRGREHPGRRYISFIHGDGLNDVVITGRNGTIDGQGEPWWNMWRHGTLKFTRP 182
Query: 178 HLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDN 237
L+EF +S N++VS++ N+P + +HPVYCSNV + ++++ AP +S T GI PDSS N
Sbjct: 183 GLIEFNNSTNILVSHVVLQNSPFWTLHPVYCSNVVVHHVTILAPTDSYNTDGIDPDSSSN 242
Query: 238 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 297
VCIED I+ G D +++KSGWDEYGIAY RP+ D+ IRR+ SS + +A GSE SGGI
Sbjct: 243 VCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIRRI-TGSSPFAGIAIGSETSGGI 301
Query: 298 SNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDF 357
NV VE I LY+S GI +T GRGG I+ I IS L + G+ G HPDD F
Sbjct: 302 QNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKISGDTGDHPDDKF 361
Query: 358 DPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNS--WECS 415
+ ALP + IT K++ G + AG G++++PF N+C SN++L+ G+ S W+CS
Sbjct: 362 NTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTLT---GTKRSPIWKCS 418
Query: 416 NIHGSSESVFPEPCPELENSSSNSSS 441
++ G+++ V P PCPEL ++ S
Sbjct: 419 DVVGAADKVNPTPCPELSATTQQGGS 444
>gi|296088539|emb|CBI37530.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/410 (48%), Positives = 283/410 (69%), Gaps = 5/410 (1%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
PR +SI +FG VGDG T NT F+ AI Y++SF + GG+QL VP G+W+TGSFNLTS+
Sbjct: 72 PRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLTSN 131
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
TLFLE+GAVILGSQ+ W +++PLPSYGRG E G R+ SLI+G L +VV+TG NGT
Sbjct: 132 FTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVITGQNGT 191
Query: 156 IDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
IDGQG +WW+ + +++L ++R HL+E +S N+++SNLTF+N+P + IHPVYCSNV I++
Sbjct: 192 IDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSNVVIKD 251
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
+++ AP +P T GI PDSS NVCIEDC I G D +++KSGWD+YGIA RP++++ +R
Sbjct: 252 VTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVR 311
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
R+ + + S V GSEMSGGISNV +E +H++DS G+ +T KGRGGY+ I I++
Sbjct: 312 RLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIR 371
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
+ + V HPDD +DP A+P I I +++ N T A GI+ AP+ I
Sbjct: 372 MERVKVPIRFSRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGI 431
Query: 396 CLSNIS-LSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTCF 444
C+ N++ L + P + W C + G +++VFP CP+++ S+ SSS C
Sbjct: 432 CMKNVTLLGLAPAA--KWHCEFVSGFTDAVFPVSCPQMQ--SNVSSSWCL 477
>gi|413942575|gb|AFW75224.1| glycoside hydrolase, family 28 [Zea mays]
Length = 506
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/402 (47%), Positives = 265/402 (65%), Gaps = 3/402 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGA--QLYVPSGKWLTGSFNLTS 94
R H+ S+ +FG VGDG T NT AF++A+ +L ++ +GG LYVP+GKWLTG FNLTS
Sbjct: 75 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 134
Query: 95 HLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
H TL+L + AVILGSQ+ W +VDPLPSYGRG + G R+ SLI G L DVV+TG NG
Sbjct: 135 HFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITGSNG 194
Query: 155 TIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
TIDGQG++WW F L Y+R +L+E + S+ + +SNLT LN+PA+NIHPVY SN+ +Q
Sbjct: 195 TIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQ 254
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
I++ AP SP T GI PDS +V IEDC I G D +++KSGWDEYGI+YG P+ + I
Sbjct: 255 GITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVI 314
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
RR+ S + + +A GSEMSGGI +V+ E I ++ + + +T GRG Y+R +
Sbjct: 315 RRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRM 374
Query: 335 ELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFA 393
L + F G+ SHPDD +DP+A+P + I+++D++ T + A GIQ APF
Sbjct: 375 TLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFR 434
Query: 394 NICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENS 435
IC++N++ ++ W C++I G S +V P PC L+ +
Sbjct: 435 GICVANVTADLSKSRKYPWNCADIEGVSANVSPAPCDPLQGA 476
>gi|225431447|ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 488
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/410 (48%), Positives = 283/410 (69%), Gaps = 5/410 (1%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
PR +SI +FG VGDG T NT F+ AI Y++SF + GG+QL VP G+W+TGSFNLTS+
Sbjct: 72 PRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLTSN 131
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
TLFLE+GAVILGSQ+ W +++PLPSYGRG E G R+ SLI+G L +VV+TG NGT
Sbjct: 132 FTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVITGQNGT 191
Query: 156 IDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
IDGQG +WW+ + +++L ++R HL+E +S N+++SNLTF+N+P + IHPVYCSNV I++
Sbjct: 192 IDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSNVVIKD 251
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
+++ AP +P T GI PDSS NVCIEDC I G D +++KSGWD+YGIA RP++++ +R
Sbjct: 252 VTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVR 311
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
R+ + + S V GSEMSGGISNV +E +H++DS G+ +T KGRGGY+ I I++
Sbjct: 312 RLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIR 371
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
+ + V HPDD +DP A+P I I +++ N T A GI+ AP+ I
Sbjct: 372 MERVKVPIRFSRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGI 431
Query: 396 CLSNIS-LSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTCF 444
C+ N++ L + P + W C + G +++VFP CP+++ S+ SSS C
Sbjct: 432 CMKNVTLLGLAPAA--KWHCEFVSGFTDAVFPVSCPQMQ--SNVSSSWCL 477
>gi|226506670|ref|NP_001151164.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|194707808|gb|ACF87988.1| unknown [Zea mays]
gi|413942574|gb|AFW75223.1| glycoside hydrolase, family 28 [Zea mays]
Length = 486
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/402 (47%), Positives = 265/402 (65%), Gaps = 3/402 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGA--QLYVPSGKWLTGSFNLTS 94
R H+ S+ +FG VGDG T NT AF++A+ +L ++ +GG LYVP+GKWLTG FNLTS
Sbjct: 55 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 114
Query: 95 HLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
H TL+L + AVILGSQ+ W +VDPLPSYGRG + G R+ SLI G L DVV+TG NG
Sbjct: 115 HFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITGSNG 174
Query: 155 TIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
TIDGQG++WW F L Y+R +L+E + S+ + +SNLT LN+PA+NIHPVY SN+ +Q
Sbjct: 175 TIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQ 234
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
I++ AP SP T GI PDS +V IEDC I G D +++KSGWDEYGI+YG P+ + I
Sbjct: 235 GITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVI 294
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
RR+ S + + +A GSEMSGGI +V+ E I ++ + + +T GRG Y+R +
Sbjct: 295 RRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRM 354
Query: 335 ELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFA 393
L + F G+ SHPDD +DP+A+P + I+++D++ T + A GIQ APF
Sbjct: 355 TLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFR 414
Query: 394 NICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENS 435
IC++N++ ++ W C++I G S +V P PC L+ +
Sbjct: 415 GICVANVTADLSKSRKYPWNCADIEGVSANVSPAPCDPLQGA 456
>gi|195644726|gb|ACG41831.1| glycoside hydrolase, family 28 [Zea mays]
Length = 439
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/402 (47%), Positives = 265/402 (65%), Gaps = 3/402 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGA--QLYVPSGKWLTGSFNLTS 94
R H+ S+ +FG VGDG T NT AF++A+ +L ++ +GG LYVP+GKWLTG FNLTS
Sbjct: 8 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 67
Query: 95 HLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
H TL+L + AVILGSQ+ W +VDPLPSYGRG + G R+ SLI G L DVV+TG NG
Sbjct: 68 HFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITGSNG 127
Query: 155 TIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
TIDGQG++WW F L Y+R +L+E + S+ + +SNLT LN+PA+NIHPVY SN+ +Q
Sbjct: 128 TIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQ 187
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
I++ AP SP T GI PDS +V IEDC I G D +++KSGWDEYGI+YG P+ + I
Sbjct: 188 GITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVI 247
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
RR+ S + + +A GSEMSGGI +V+ E I ++ + + +T GRG Y+R +
Sbjct: 248 RRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRM 307
Query: 335 ELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFA 393
L + F G+ SHPDD +DP+A+P + I+++D++ T + A GIQ APF
Sbjct: 308 TLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFR 367
Query: 394 NICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENS 435
IC++N++ ++ W C++I G S +V P PC L+ +
Sbjct: 368 GICVANVTADLSKSRKYPWNCADIEGVSANVSPAPCDPLQGA 409
>gi|147776708|emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
Length = 479
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/403 (48%), Positives = 280/403 (69%), Gaps = 3/403 (0%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
PR +SI +FG VGDG T NT F+ AI Y++SF + GG+QL VP G+W+TGSFNLTS+
Sbjct: 61 PRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLTSN 120
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
TLFLE+GAVILGSQ+ W +++PLPSYGRG E G R+ SLI+G L +VV+TG NGT
Sbjct: 121 FTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVITGQNGT 180
Query: 156 IDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
IDGQG +WW+ + +++L ++R HL+E +S N+++SNLTF+N+P + IHPVYCSNV I++
Sbjct: 181 IDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSNVVIKD 240
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
+++ AP +P T GI PDSS NVCIEDC I G D +++KSGWD+YGIA RP++++ +R
Sbjct: 241 VTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVR 300
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
R+ + + S V GSEMSGGISNV +E +H++DS G+ +T KGRGGY+ I I++
Sbjct: 301 RLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIR 360
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
+ + V HPDD +DP A+P I I +++ N T A GI+ AP+ I
Sbjct: 361 MERVKVPIRFSRGSNDHPDDXWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGI 420
Query: 396 CLSNIS-LSINPGSYNSWECSNIHGSSESVFPEPCPELENSSS 437
C+ N++ L + P + W C + G +++VFP CP+++++ +
Sbjct: 421 CMKNVTLLGLAPAA--KWHCEFVSGFTDAVFPVSCPQMQSNEA 461
>gi|357443845|ref|XP_003592200.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481248|gb|AES62451.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 481
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/404 (46%), Positives = 260/404 (64%), Gaps = 1/404 (0%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGS 89
D P ++ R HS +T+FG VGDGKTLNT AF +AI L +A+ GGAQL VP GKWLTGS
Sbjct: 45 DYPAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGS 104
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
FNLTSH TLFL+K +VIL SQ+ S W LPSYG G R+ SL+ G L DV++
Sbjct: 105 FNLTSHFTLFLQKDSVILASQDESEWPQFPVLPSYGSGRNASDGRFSSLVFGTNLTDVII 164
Query: 150 TGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
TG+NGTIDGQGS WWD F + +RP+++E + S+ + +SNLT +N+P++ +HPVY S
Sbjct: 165 TGNNGTIDGQGSYWWDKFHKGQMKITRPYMIEIMYSDQIQISNLTLINSPSWFVHPVYSS 224
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
N+ I +++ AP + P T GI PDS NV IED I G D I++KSGWDEYGI +G+P+
Sbjct: 225 NIIINGLTILAPVDIPNTDGIDPDSCTNVRIEDNYIVSGDDCIAIKSGWDEYGIKFGKPS 284
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQI 329
+ IRR+ S + VA GSEMSGGI +V+VE + + + + +T GRG Y++ I
Sbjct: 285 QQIIIRRLTCISPKSAMVALGSEMSGGIQDVRVEDVTAIKTESAVRIKTAIGRGAYVKDI 344
Query: 330 VISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQE 389
+ L + F G+ SHPD+ FDP+ALP I +I ++D+ N+TIAG GI
Sbjct: 345 FVKGMNLDTMKYVFWMTGSYKSHPDNGFDPNALPKISEINYRDVTAKNVTIAGKLDGISN 404
Query: 390 APFANICLSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPEL 432
PF IC+SN ++ ++ W C+++ G + +V P PC L
Sbjct: 405 DPFTGICVSNATIEMSAHKKKLPWNCTDVSGVTSNVSPTPCELL 448
>gi|357443839|ref|XP_003592197.1| Endo-polygalacturonase-like protein [Medicago truncatula]
gi|355481245|gb|AES62448.1| Endo-polygalacturonase-like protein [Medicago truncatula]
Length = 475
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/432 (45%), Positives = 273/432 (63%), Gaps = 11/432 (2%)
Query: 5 VALLLLLALC---SAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQ 61
V +L+ LA C S+I +N D ++ R H+ +T+FGAVGDGKTLNT AF
Sbjct: 23 VLILVSLAECREPSSIKLNSF-------DYHAINCRKHNAVLTDFGAVGDGKTLNTKAFN 75
Query: 62 NAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPL 121
+AI L +A+ GGAQL VP GKWLTGSFNLTSH TLFL+KGAVIL SQ+ S W + L
Sbjct: 76 SAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKGAVILASQDESEWPKLSFL 135
Query: 122 PSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVE 181
PSYGR + P R+ SLI G L DVV+TG+NGTIDGQGS WWD F + L +RP+++E
Sbjct: 136 PSYGREKDAPDGRFSSLIFGTNLTDVVITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIE 195
Query: 182 FISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIE 241
+ S+ + +SNLT +N+P + +HP+Y SN+ I +++ AP + P T GI PDS NV IE
Sbjct: 196 IMYSDQIQISNLTLINSPNWFVHPIYSSNIIINRLTILAPVDVPNTDGIDPDSCTNVLIE 255
Query: 242 DCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQ 301
D I G D I++KSG D YGI G+P+ + +RR+ S + VA GSEMSGGI +++
Sbjct: 256 DNYIVSGDDCIAIKSGLDGYGIKVGKPSQKIIVRRLTCISPKSAMVALGSEMSGGIQDIR 315
Query: 302 VEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDA 361
+E I ++ + + +T GRG Y++ I + L + F G SH ++ FDP A
Sbjct: 316 IEDITAINTESAVRIKTAVGRGAYVKDIFVKGMNLNTMKYVFWMTGAYKSHAENGFDPKA 375
Query: 362 LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN-SWECSNIHGS 420
LP I I ++DII N+TIAG GI PF IC+SN+++ ++ N W C+++ G
Sbjct: 376 LPKISGINYRDIIAKNVTIAGQLDGISNDPFTGICISNVTIEMSAQKNNLPWNCTDVSGV 435
Query: 421 SESVFPEPCPEL 432
+ + P+PC L
Sbjct: 436 ASNAVPKPCDML 447
>gi|356516364|ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 477
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/404 (47%), Positives = 270/404 (66%), Gaps = 1/404 (0%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
PR +SI +FG VGDGKT NT +F+ AI Y++ F ++GGAQL +P+G WLTGSFNLTS+
Sbjct: 70 PRKVVLSIEDFGGVGDGKTSNTESFRRAIRYMQRFQNRGGAQLNIPTGTWLTGSFNLTSN 129
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
TLFL GAVIL SQ+P W +++PLPSYGRG E G R+ SLI+G + +VV+TG NGT
Sbjct: 130 FTLFLHHGAVILASQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGNGISNVVITGQNGT 189
Query: 156 IDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
+DGQG +WW+ + +++L ++R HL+E ISS+NV++SNLTF N+P + IHPVYCSNV ++
Sbjct: 190 VDGQGRMWWELWWNRTLEHTRGHLLELISSDNVLISNLTFRNSPFWTIHPVYCSNVVVKG 249
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
+++ AP +P T GI PDSS NVCIED I G D +++KSGWD YGI P+T++ +R
Sbjct: 250 MTILAPLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDHYGITMAHPSTNIIVR 309
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
R+ + + S V GSEMSGGISN+ +E +H++DS G+ ++ KGRGGYI + ISD
Sbjct: 310 RISGTTPTCSGVGIGSEMSGGISNITIENLHVWDSAAGVRIKSDKGRGGYITNVSISDIR 369
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
+ + + HPDD +DP A+P I +++ N T A G++ + F +
Sbjct: 370 MERVKIPIRFSRGSNDHPDDGWDPKAVPRFKDILISNVVSVNSTKAPVLEGVEGSSFEGL 429
Query: 396 CLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNS 439
C NI+L W C + G + VFP PCPEL N+S +S
Sbjct: 430 CFKNITLH-GVALSARWRCEYVSGFATEVFPVPCPELRNNSYSS 472
>gi|359490609|ref|XP_002273177.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 465
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/432 (45%), Positives = 267/432 (61%), Gaps = 2/432 (0%)
Query: 7 LLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFY 66
L L L+ V G ++ ++ R HS +T+FGA GDGKT+NT AF++AI
Sbjct: 12 LFRFHVLVVVGLLMSSVRGGGSEEYRAINCRKHSAVLTDFGAKGDGKTMNTKAFKSAIAN 71
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
L A GGAQL VP GKWLTGSFNLTSH TLF+ K AVILG+Q+ + + +++ LPSYG
Sbjct: 72 LSQVAGDGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDAVILGAQDEAAYPLIEILPSYGA 131
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSE 186
G + G R+ SLI G L DVV+TG NGTI GQG WWD F + L +RP+L+E + S+
Sbjct: 132 GRD-GGGRHASLIFGTNLTDVVITGGNGTIHGQGQYWWDKFRADKLKDTRPYLIEIMYSD 190
Query: 187 NVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIA 246
V +SNL +++P++N+HP Y SNV IQ +++ AP SP T GI PDSS NV IEDC I
Sbjct: 191 QVQISNLILIDSPSWNVHPTYSSNVIIQWLTIIAPVGSPNTDGINPDSSKNVLIEDCFIV 250
Query: 247 MGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIH 306
G D I++KSGWD+YGI +G PT D+ IRR+ S + +A GSEMSGGI NV+ E I
Sbjct: 251 SGDDCIAVKSGWDQYGIKFGMPTEDLIIRRLTCISPDSAVIALGSEMSGGIKNVRAENIT 310
Query: 307 LYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAID 366
DS +G+ ++ GRGGY++ I + + F G+ G HPDD +DP ALP I+
Sbjct: 311 AIDSESGVRIKSGVGRGGYVKDIYARGMTMKTMKYVFWMTGDYGQHPDDGWDPKALPKIE 370
Query: 367 QITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN-SWECSNIHGSSESVF 425
I ++D++ N+T + GI PF IC+SN+ + + W C+N+ G S V
Sbjct: 371 NINYRDMVAENVTYSARLDGISGDPFTGICISNVKIGLTEKPKKLQWNCTNVEGVSSQVT 430
Query: 426 PEPCPELENSSS 437
P C L S
Sbjct: 431 PPSCDLLHPSKK 442
>gi|22329119|ref|NP_195070.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28393881|gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332660825|gb|AEE86225.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 475
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/400 (49%), Positives = 275/400 (68%), Gaps = 3/400 (0%)
Query: 35 DPRPHSV--SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNL 92
DP P+ + SIT+FG VGDGKT NT AF+ A+ +L+ FA +GGAQL VP G WL+GSFNL
Sbjct: 64 DPFPNRIVMSITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNL 123
Query: 93 TSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGD 152
TS+ TLFLE+GA+ILGS++ W +++PLPSYGRG E PG R+ SLI+G L +VV+TG+
Sbjct: 124 TSNFTLFLERGALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGE 183
Query: 153 NGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVH 212
NGTIDGQG +WW+ + +++L ++R HL+E +S N+++SNLT LN+P + IHPVYCSNV
Sbjct: 184 NGTIDGQGKMWWELWWNRTLVHTRGHLIELKNSHNILISNLTLLNSPFWTIHPVYCSNVV 243
Query: 213 IQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDV 272
I+N+++ AP +P T GI PDSS NVCIEDC I G D +++KSGWD+YG+A RP++++
Sbjct: 244 IRNMTILAPMNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNI 303
Query: 273 HIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVIS 332
IRR+ + + S V GSEMSGGI N+ VE IH++DS G+ +T KGRGGYI I +
Sbjct: 304 VIRRISGTTRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFN 363
Query: 333 DAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPF 392
+ L + V H DD +DP ALP + I +++ N A G++ F
Sbjct: 364 NVLLEKVKVPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSF 423
Query: 393 ANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPEL 432
++CL N++L P + W+C ++ G + VFP CP+L
Sbjct: 424 QDVCLRNVTLLGLPKT-EKWKCKDVSGYASDVFPLSCPQL 462
>gi|357464681|ref|XP_003602622.1| Germin-like protein [Medicago truncatula]
gi|355491670|gb|AES72873.1| Germin-like protein [Medicago truncatula]
Length = 775
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/412 (47%), Positives = 276/412 (66%), Gaps = 4/412 (0%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
PR SI +FG VGDGKT NT +FQ AI Y++ F KGG+QL +P+G WLTGSFNLTS
Sbjct: 71 PRKIIKSIVDFGGVGDGKTSNTQSFQRAIRYMQRFRGKGGSQLNIPNGTWLTGSFNLTSD 130
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
TLFL GAV+LGSQ+ W +++PLPSYGRG E G R+ SLI+ +R+VV+TG+NGT
Sbjct: 131 FTLFLHHGAVVLGSQDIKEWPIIEPLPSYGRGRERLGGRHISLIHANGVRNVVITGENGT 190
Query: 156 IDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
+DGQG +WW+ + +++L ++R HL+E ++SENV+VSNLTF N+P + IHPVYCSNV I+
Sbjct: 191 VDGQGRMWWELWWNRTLVHTRGHLLELMNSENVLVSNLTFRNSPFWTIHPVYCSNVVIKG 250
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
+++ AP +P T GI PDSS NVCIED I G D +++KSGWD+YGIA +P+T++ +
Sbjct: 251 MTILAPLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDQYGIAVAKPSTNIIVS 310
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
RV + + S V GSEMSGGISN+ +E +H+++S G+ ++ GRGGYI+ + IS+
Sbjct: 311 RVSGTTPTCSGVGIGSEMSGGISNITIENLHVWNSAAGVRIKSDNGRGGYIKNVSISNIR 370
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
+ + + HPDD +DP A+P I ++I N T A G++ + F +
Sbjct: 371 MERVKIPIRFSRGSNDHPDDGWDPKAVPRFKDILISNVISVNSTKAPVLEGVKGSSFEGL 430
Query: 396 CLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLI 447
C NI+ + +W C + G + VFP PCPEL+N N +S+CF ++
Sbjct: 431 CFKNITF-LGVALSATWHCEYVAGFTNGVFPLPCPELQN---NGTSSCFRVL 478
>gi|359490611|ref|XP_002273143.2| PREDICTED: probable polygalacturonase-like, partial [Vitis
vinifera]
Length = 432
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/401 (47%), Positives = 261/401 (65%), Gaps = 2/401 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R HS +TEFG +GDGKT NT AF+ AI +LK FA GGA+L VP GKWLTGSFNLTSH
Sbjct: 2 RKHSALLTEFGGIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLTSHF 61
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL++ K AVILGSQ S + + PLPSYG+G + G R+ SLI G L DVV+ G NGTI
Sbjct: 62 TLYIHKDAVILGSQEESDYPHIPPLPSYGKGRD-GGGRFSSLIFGTNLTDVVIIGGNGTI 120
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
+GQG VWWD F + L +RP+L+E + S+ V +SNLT +++P++N+HPVYCS+V IQ +
Sbjct: 121 NGQGRVWWDKFKQKKLVDTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPVYCSDVIIQGM 180
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP + P T GI PDS NV IEDC I G D I++KSGWD+YGI YG PT D+ IRR
Sbjct: 181 TILAPVDVPNTDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYGVPTRDIVIRR 240
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S + +A GSEMSGGI NV+ E I +S +G+ +T GRGGY++ I +
Sbjct: 241 LTCISPDSAVIALGSEMSGGIKNVRAEDITAINSQSGVRIKTGVGRGGYVQDIYARKMTM 300
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ F + GSHPDD++D A+P I+ I +++++ N+T + GI F IC
Sbjct: 301 KTMKYVFWMTSDYGSHPDDEWDRKAIPKIENINYREVVAENVTYSARLDGIAGDKFTGIC 360
Query: 397 LSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELENSS 436
+S++++ + W C+N+ G + V P+ C L S
Sbjct: 361 ISDVTIRLTQKPKQLQWNCTNVEGVTSQVTPQSCDLLPPSK 401
>gi|115450425|ref|NP_001048813.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|108705945|gb|ABF93740.1| polygalacturonase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547284|dbj|BAF10727.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|125584758|gb|EAZ25422.1| hypothetical protein OsJ_09236 [Oryza sativa Japonica Group]
Length = 458
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/397 (46%), Positives = 255/397 (64%), Gaps = 1/397 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R H ITE+G VGDG+ NT AF A+ L A GGA L VP GKWLTG FNLTSH
Sbjct: 36 RKHVARITEYGGVGDGRRSNTAAFAKAVADLSLRAGDGGAALVVPKGKWLTGPFNLTSHF 95
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL+ GA IL SQN W ++ PLPSYGRG + PG RY + I G L DV++TG NGTI
Sbjct: 96 TLFLDHGAEILASQNLEDWPLIAPLPSYGRGRDEPGPRYSNFIAGSNLTDVIITGRNGTI 155
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
+GQG VWWD F ++ L Y+R +L+E + S N+++SN+TF+++P++N+HP YC+NV I I
Sbjct: 156 NGQGQVWWDKFHAKELTYTRGYLLELLYSNNIIISNVTFVDSPSWNLHPTYCTNVTISGI 215
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI PDSS +V IED I G D I++KSGWD+YGI + P+ + IRR
Sbjct: 216 TILAPLNSPNTDGIDPDSSSHVKIEDSYIVSGDDCIAVKSGWDQYGIKFNMPSQHILIRR 275
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S + + +A GSEMSGGI +V+ D+ + + ++ GRGGY++ + + L
Sbjct: 276 LTCISPTSAMIALGSEMSGGIRDVRAVDNVAIDTESAVRIKSGVGRGGYVKDVFVRGLSL 335
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ + F GN G HPD+ DP+ALP + I + D+ N+T+AG GI P+ IC
Sbjct: 336 HTMKWVFWMTGNYGQHPDNSSDPNALPEVTGINYSDVFAENVTMAGRMEGIPNDPYTGIC 395
Query: 397 LSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPEL 432
+SN++ + P + W C+++ G + V P PCPEL
Sbjct: 396 MSNVTAQLAPDAKKLQWNCTDVKGVASDVSPVPCPEL 432
>gi|357118995|ref|XP_003561232.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 512
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/401 (46%), Positives = 257/401 (64%), Gaps = 3/401 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGA--QLYVPSGKWLTGSFNLTS 94
R H+ S+ EFG VGDG T NT AF+ A+ +L ++ GG LYVP+G+WLT FNLTS
Sbjct: 69 REHTASLAEFGGVGDGTTSNTAAFRAAVEHLSQYSGDGGGGGMLYVPAGRWLTAPFNLTS 128
Query: 95 HLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
H TLFL AVIL SQN S W V+ PLPSYGRG + G RY SLI+G L DVV+TG+NG
Sbjct: 129 HFTLFLHSDAVILASQNISEWPVIAPLPSYGRGRDHAGGRYTSLISGSNLTDVVITGNNG 188
Query: 155 TIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
TIDGQG+ WW + S L Y+R +L+E +SS+ + +SN+T LN+PA+NIHPVY N+ IQ
Sbjct: 189 TIDGQGATWWSKYKSGKLKYTRGYLIELMSSDTIFISNVTLLNSPAWNIHPVYSKNIVIQ 248
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
+++ AP SP T GI PDS V IEDC + G D +++KSGWDEYGIA G PT V +
Sbjct: 249 GVTILAPTRSPNTDGINPDSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAAGIPTEHVIV 308
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
RR+ S + + VA GSEMSGG+ +V++E + D+ + + +T GRG Y++ I
Sbjct: 309 RRLTCVSPTSALVAIGSEMSGGVRDVRIEDVAAVDTESAVRIKTAVGRGAYVKDIYARRM 368
Query: 335 ELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFA 393
L + F G+ SHPDD +D A+P ++ ++F+D+ T + A GI APF
Sbjct: 369 TLTGMKRVFWMTGDYKSHPDDGYDKTAVPVVEGVSFQDVAATGVWKEAARMEGISGAPFK 428
Query: 394 NICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELEN 434
IC++N+++ + W C+++ G S V P PC +L+
Sbjct: 429 GICMANVTMEMTKPRKVMWNCADVEGVSTGVTPAPCGQLQQ 469
>gi|411101510|gb|AFW04075.1| polygalacturonase [Litchi chinensis]
Length = 481
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/400 (47%), Positives = 255/400 (63%), Gaps = 1/400 (0%)
Query: 34 LDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLT 93
L+ R HS +T+FG VGDGKT NT AF++AI L A GGA L VP GKWLTGSFNLT
Sbjct: 49 LNCRKHSAVLTDFGGVGDGKTSNTKAFRSAIDKLSKLASDGGAALVVPPGKWLTGSFNLT 108
Query: 94 SHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDN 153
SH TL++ K AV+LGSQ S W + LPSYGRG + G R SLI G L DVVVTG N
Sbjct: 109 SHFTLYIHKDAVLLGSQVESEWPRLPVLPSYGRGRDAAGGRLSSLIFGTNLTDVVVTGAN 168
Query: 154 GTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHI 213
GTIDGQG+ WW F L+ +RP+L+E + S V +SNLTF+N+P++N+HP+Y SNV I
Sbjct: 169 GTIDGQGAYWWGKFKKNQLDVTRPYLIEIMYSNQVQISNLTFVNSPSWNVHPIYSSNVII 228
Query: 214 QNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVH 273
Q +++ AP +SP T GI PDS ++ IEDC I G D I++KSGWD+YGI G PT +
Sbjct: 229 QGLTILAPVDSPNTDGIDPDSCTDIRIEDCYIVSGDDCIAVKSGWDQYGIKVGMPTQRLV 288
Query: 274 IRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD 333
IRRV S +++A GSEMSGGI +V+ E I D+ +G+ +T GRGGY++ I +
Sbjct: 289 IRRVTCISPDSATIALGSEMSGGIRDVRAEDITAIDTQSGVRIKTGVGRGGYVKDIYVRR 348
Query: 334 AELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
+ + F G+ G HPD FDP ALP I I ++D++ N+T + GI PF
Sbjct: 349 MTMKTMKYVFWMTGSYGQHPDPGFDPKALPDIHGINYRDMVAENVTYSARLDGIPNDPFK 408
Query: 394 NICLSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPEL 432
IC+ N+++++ W C+++ G + V P C L
Sbjct: 409 GICIFNVTITLTKKPKELQWNCTDVQGVTSRVTPPACSLL 448
>gi|356534103|ref|XP_003535597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 466
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/397 (47%), Positives = 253/397 (63%), Gaps = 1/397 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R HS +T+FG VGDG T NT AFQ+AI L +A GGA L VP GKWLTG FNLTSH
Sbjct: 44 RKHSAVLTDFGGVGDGITSNTKAFQSAISKLSQYASDGGAMLVVPPGKWLTGPFNLTSHF 103
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL+ GAVIL SQ+ S W + LPSYGRG + PG R+ SLI G L DVV+TG+NG I
Sbjct: 104 TLFLDFGAVILASQDESEWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGNNGLI 163
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG+ WW+ F L +RP+L+E + S+ + +S LT +N+P + +HPVY SN+ I+ +
Sbjct: 164 DGQGAYWWNKFHQGQLTLTRPYLIEIMYSDQIQISFLTLVNSPTWFVHPVYSSNIIIKGL 223
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP +SP T GI PDS N+ IEDC I G D I++KSGWDEYGI +G PT + IRR
Sbjct: 224 TIKAPVDSPNTDGINPDSCSNIRIEDCNITSGDDCIAVKSGWDEYGIRFGMPTQHLIIRR 283
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S + +A GSEMSGGI +V+ E + ++ + +T GRGGY++ I + L
Sbjct: 284 ITCVSPDSAMIALGSEMSGGIYDVRAEDLTAINTEAAVRIKTAIGRGGYVKNIFVKGMNL 343
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ F G G HPD +DP ALP I I ++D++ TN+T + GI PF IC
Sbjct: 344 NTMKYVFWITGTYGDHPDPGYDPKALPYITGINYRDVVATNVTKSARLEGISNDPFTGIC 403
Query: 397 LSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPEL 432
+SN+S+ ++ W CSNI G + +V P PC L
Sbjct: 404 ISNVSIQVSEQQKKLQWNCSNISGVTSNVTPYPCALL 440
>gi|297802658|ref|XP_002869213.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315049|gb|EFH45472.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 274/400 (68%), Gaps = 3/400 (0%)
Query: 35 DPRPHS--VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNL 92
DP P+ +SIT+FG VGDGKT NT AF+ A+ +L+ FA +GGAQL VP G WL+GSFNL
Sbjct: 64 DPFPNRKVMSITDFGGVGDGKTSNTEAFRRAVRHLEGFAAEGGAQLNVPMGTWLSGSFNL 123
Query: 93 TSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGD 152
TS+ TLFL++GAVILGS++ W +V+PLPSYGRG E PG R+ SLI+G L +VV+TG+
Sbjct: 124 TSNFTLFLQRGAVILGSKDLDEWPIVEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGE 183
Query: 153 NGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVH 212
NGTIDGQG +WW+ + +++L ++R HL+E + N+++SNLT LN+P + IHPVYCSNV
Sbjct: 184 NGTIDGQGKMWWELWWNRTLVHTRGHLIELKNCHNILISNLTLLNSPFWTIHPVYCSNVV 243
Query: 213 IQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDV 272
I+N+++ AP +P T GI PDSS NVCIEDC I G D I++KSGWD+YG+A RP++++
Sbjct: 244 IRNMTILAPINAPNTDGIDPDSSTNVCIEDCYIESGDDLIAVKSGWDQYGMAVARPSSNI 303
Query: 273 HIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVIS 332
IRR+ + + S V GSEMSGGI N+ VE IH++DS G+ +T KGRGGYI I +
Sbjct: 304 VIRRISGTTRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFN 363
Query: 333 DAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPF 392
+ L + V H DD +DP ALP + I +++ N A G++ F
Sbjct: 364 NVLLEKVKVPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSF 423
Query: 393 ANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPEL 432
++CL N++L P + W+C ++ G + VFP CP+L
Sbjct: 424 QDVCLRNVTLLGLPQT-EKWKCKDVSGYASDVFPLSCPQL 462
>gi|343172553|gb|AEL98980.1| putative polygalacturonase, partial [Silene latifolia]
gi|343172555|gb|AEL98981.1| putative polygalacturonase, partial [Silene latifolia]
Length = 431
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/408 (46%), Positives = 259/408 (63%), Gaps = 4/408 (0%)
Query: 34 LDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLT 93
L+ R HS ITEFGA GDGKTLNT AF+ A+ +L GGAQL VP G+WLTGSF+L
Sbjct: 4 LNCRKHSAFITEFGAKGDGKTLNTKAFKTAVNFLSRLTHDGGAQLVVPPGRWLTGSFSLI 63
Query: 94 SHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDN 153
SH TL+L +GAV+L SQ+ + +++PLPSYG+G + P R+ SLI G L DVV+TG N
Sbjct: 64 SHFTLYLHQGAVLLASQDEKEYPILEPLPSYGKGRDAPAGRFASLIFGTNLTDVVITGAN 123
Query: 154 GTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHI 213
GTIDGQG WW + S L +RP+++E + S V +SNLT LN+P +N+HPVYC +V I
Sbjct: 124 GTIDGQGESWWKKYKSNELTQTRPYMIELMYSNGVQISNLTLLNSPNWNVHPVYCRDVII 183
Query: 214 QNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVH 273
+ +++ AP SP T GI PDS NV IE I G D I++KSGWDEYGI + PT DV
Sbjct: 184 RGLTILAPTHSPNTDGIDPDSCSNVRIEHNYIVSGDDCIAIKSGWDEYGIRFNMPTQDVV 243
Query: 274 IRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD 333
IR + S + +++A GSEMSGGI NV+ E I D+ +GI +T+ GRG ++R I +
Sbjct: 244 IRHLTCISPTSATIALGSEMSGGIQNVRAEHITAIDTESGIRVKTSPGRGAFVRNIYVRK 303
Query: 334 AELYNINVAFGACGNCGS---HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEA 390
+ + F G S HPD ++P ALP I+ I + D++ N+++ G GI+E
Sbjct: 304 MTMKTMKYVFWMTGYYSSSRVHPDRHYNPRALPVIEGINYMDMVAANVSMPGYLEGIKED 363
Query: 391 PFANICLSNISLSINPGSYNS-WECSNIHGSSESVFPEPCPELENSSS 437
F ICLSN+++ + W C+NI G + V P+PC L S +
Sbjct: 364 VFKGICLSNVTIGLAKKPKEMLWNCTNIEGVASGVTPQPCGFLRESKA 411
>gi|326524051|dbj|BAJ97036.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/404 (48%), Positives = 268/404 (66%), Gaps = 1/404 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R + S+ EFGAVGDG T NT AFQ A+ L+ GGA+L VP+G+WLTGSFNLTS
Sbjct: 75 RAVTASVEEFGAVGDGVTSNTAAFQRAVAALEERGGGGGARLEVPAGRWLTGSFNLTSRF 134
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL GAVILGSQ+P W ++ PLPSYGRG E G R+ SLI+G L DVV+TG NGTI
Sbjct: 135 TLFLHHGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGQDLNDVVITGSNGTI 194
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG +WW+ + +++LN++R HL+E ++S NV++SN+T N+P + +HPVYC NV I+++
Sbjct: 195 DGQGRMWWELWWNRTLNHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRNVVIKDL 254
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP +P T GI PDSS VCIEDC I G D +++KSGWD+YGI+ G+P++++ I+R
Sbjct: 255 TILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 314
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V + + S V FGSEMSGGISNV V +H+++S + + +T GRGGYI I I++ +
Sbjct: 315 VSGTTPTCSGVGFGSEMSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIANVTM 374
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ V H DD +D ALP I I DI+G ++ A + A + IC
Sbjct: 375 EKVKVPIRFSRGSDDHSDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVYEGIC 434
Query: 397 LSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSS 440
N+SL W+C +++G + VFP PC EL N+ S+SS
Sbjct: 435 FRNVSLRAIRRQVR-WQCESVYGEAHEVFPAPCEELRNNGSSSS 477
>gi|226491354|ref|NP_001148255.1| polygalacturonase [Zea mays]
gi|195616976|gb|ACG30318.1| polygalacturonase [Zea mays]
gi|219888097|gb|ACL54423.1| unknown [Zea mays]
gi|413941563|gb|AFW74212.1| polygalacturonase [Zea mays]
Length = 493
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/400 (47%), Positives = 264/400 (66%), Gaps = 2/400 (0%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQ-LYVPSGKWLTGSFNLTSHLTLFL 100
S+ EFGAVGDG TLNT AF+ A+ L + A GG L VP G+WLTGSFNLTS TLFL
Sbjct: 89 SVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTSRFTLFL 148
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+GAVILGSQ+P W ++ PLPSYGRG E G R+ SLI+G L DVV+TG NGTIDGQG
Sbjct: 149 HRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQG 208
Query: 161 SVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
+WW+ + +++LN++R HL+E ++S NV++S++T N+P + +HPVYCSNV ++++++ A
Sbjct: 209 HMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCSNVVMKDLTILA 268
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
P ++P T GI PDSS VCIEDC I G D +++KSGWD+YGI++G+P+T++ I+RV
Sbjct: 269 PLDAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISFGKPSTNIVIQRVSGT 328
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN 340
+ + S V FGSEMSGGISNV V +H+++S + +T GRGGYI I I+ + +
Sbjct: 329 TPTCSGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITIASVAMEKVK 388
Query: 341 VAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 400
V HPDD +DP ALP I + D++G ++ A + A + IC N
Sbjct: 389 VPIRFSRGADDHPDDRYDPAALPRISNVLVSDVVGVHLQRAPMLEAVPGAVYEGICFRNF 448
Query: 401 SLS-INPGSYNSWECSNIHGSSESVFPEPCPELENSSSNS 439
S I + W C +++G + VFP PC E S+S
Sbjct: 449 SFRGIRRQQDSRWHCESVYGEAHDVFPAPCEEFRRDGSSS 488
>gi|297821649|ref|XP_002878707.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324546|gb|EFH54966.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/440 (44%), Positives = 270/440 (61%), Gaps = 11/440 (2%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQP-----TLDPRPHSVSITEFGAVGDGKTL 55
++ +L++LA+ S ++ E D C + L+ R H+ +TEFGAVGDGKT
Sbjct: 13 IRTSFCILVVLAISSFSMM--EARDLGCKGKTNIEYMALNCRKHTAVLTEFGAVGDGKTS 70
Query: 56 NTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHW 115
NT AF+ AI L A GG QL VP GKWLTGSFNL+SH TLF++KGA IL SQ+ S +
Sbjct: 71 NTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLSSHFTLFIQKGATILASQDESEY 130
Query: 116 DVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSL-NY 174
VV PLPSYG+G + G + SLI+G L DVV+TG+NGTI+GQG WW + S N
Sbjct: 131 PVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKNI 190
Query: 175 SRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDS 234
+RP+ +E + S+NV +SN+T +++PA+NIHPVYC+NV ++ +++ AP +SP T GI PDS
Sbjct: 191 TRPYTIEIMFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDS 250
Query: 235 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 294
N IEDC + G D I++KSGWD++GI G PT + IRR+ S + +A GSEMS
Sbjct: 251 CTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTKQLSIRRLTCISPDSAGIALGSEMS 310
Query: 295 GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPD 354
GGI +V++E I L + + I +T GRGGY++ I + + F G HP
Sbjct: 311 GGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPA 370
Query: 355 DDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS--LSINPGSYNSW 412
FDP A+P I I ++D+ N+T G + PF IC+SNI L+ P W
Sbjct: 371 SGFDPKAMPEITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKL-LW 429
Query: 413 ECSNIHGSSESVFPEPCPEL 432
C+NI G S V P+PC L
Sbjct: 430 NCTNISGVSSKVTPKPCSLL 449
>gi|326490848|dbj|BAJ90091.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/402 (44%), Positives = 261/402 (64%), Gaps = 3/402 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGA--QLYVPSGKWLTGSFNLTS 94
R H+ S+T+FG VGDG T NT AF+ A+ +L ++ +GG LYVP+G+WLT FNLTS
Sbjct: 44 REHTASLTDFGGVGDGNTSNTAAFRKAVEHLSQYSGEGGGGGMLYVPAGRWLTAPFNLTS 103
Query: 95 HLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
H TLFL AVILG+Q+ + W V+DPLPSYGRG + G RY SL++G L DVV+TG+NG
Sbjct: 104 HFTLFLHADAVILGTQDVAQWPVIDPLPSYGRGRDHAGGRYASLVSGSNLTDVVITGNNG 163
Query: 155 TIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
TIDGQG+ WW + S L Y+R +L+E + ++ V +SN+T +N+PA+NIHPVY N+ +
Sbjct: 164 TIDGQGATWWSKYKSGKLKYTRGYLIELMHTDGVFISNVTLVNSPAWNIHPVYSRNIVVS 223
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
+++ AP +SP T GI PDS V IEDC + G D +++KSGWDEYGIA G P+ + +
Sbjct: 224 GVTILAPVKSPNTDGINPDSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAVGMPSEHISV 283
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
RR+ S + + +A GSEMSGGI +V+ E I + + + +T GRG Y+R +
Sbjct: 284 RRLTCVSPTSAVIALGSEMSGGIRDVRAEDITAIGTESAVRIKTAVGRGAYVRDVYARRM 343
Query: 335 ELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFA 393
L + F G+ SHPDD +D A+P ++ I+++D++ T + A GIQ APF
Sbjct: 344 RLDGMKRVFWMTGDYKSHPDDGYDKAAVPVVENISYQDVVATGVWKEAARMQGIQGAPFK 403
Query: 394 NICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENS 435
IC++N+++ + SW C+++ G S V P PC L+ +
Sbjct: 404 GICMANVTMEMTKERKVSWNCADVEGVSAGVTPAPCAPLQGT 445
>gi|42569272|ref|NP_179968.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|91806252|gb|ABE65854.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
gi|330252406|gb|AEC07500.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 477
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/438 (44%), Positives = 270/438 (61%), Gaps = 7/438 (1%)
Query: 1 MKMPVALLLLLALCSAILINGE--VSDGQCD-DQPTLDPRPHSVSITEFGAVGDGKTLNT 57
++ +L++LA+ S ++ S G+ + + L+ R H+ +TEFGAVGDGKT NT
Sbjct: 13 IRTSFCILVVLAISSFSMMEARDLASKGKTNIEYMALNCRKHTAVLTEFGAVGDGKTSNT 72
Query: 58 LAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDV 117
AF+ AI L A GG QL VP GKWLTGSFNLTSH TLF++KGA IL SQ+ S + V
Sbjct: 73 KAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQDESEYPV 132
Query: 118 VDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLN-YSR 176
V PLPSYG+G + G + SLI+G L DVV+TG+NGTI+GQG WW + S +R
Sbjct: 133 VAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKGITR 192
Query: 177 PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSD 236
P+ +E I S+NV +SN+T +++PA+NIHPVYC+NV ++ +++ AP +SP T GI PDS
Sbjct: 193 PYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCT 252
Query: 237 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 296
N IEDC + G D I++KSGWD++GI G PT + IRR+ S + +A GSEMSGG
Sbjct: 253 NTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMSGG 312
Query: 297 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDD 356
I +V++E I L + + I +T GRGGY++ I + + F G HP
Sbjct: 313 IKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASG 372
Query: 357 FDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS--LSINPGSYNSWEC 414
FDP A+P I I ++D+ N+T G + PF IC+SNI L+ P W C
Sbjct: 373 FDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKL-LWNC 431
Query: 415 SNIHGSSESVFPEPCPEL 432
++I G S V P+PC L
Sbjct: 432 TSISGVSSKVTPKPCSLL 449
>gi|116831111|gb|ABK28510.1| unknown [Arabidopsis thaliana]
Length = 478
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/438 (44%), Positives = 270/438 (61%), Gaps = 7/438 (1%)
Query: 1 MKMPVALLLLLALCSAILINGE--VSDGQCD-DQPTLDPRPHSVSITEFGAVGDGKTLNT 57
++ +L++LA+ S ++ S G+ + + L+ R H+ +TEFGAVGDGKT NT
Sbjct: 13 IRTSFCILVVLAISSFSMMEARDLASKGKTNIEYMALNCRKHTAVLTEFGAVGDGKTSNT 72
Query: 58 LAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDV 117
AF+ AI L A GG QL VP GKWLTGSFNLTSH TLF++KGA IL SQ+ S + V
Sbjct: 73 KAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQDESEYPV 132
Query: 118 VDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLN-YSR 176
V PLPSYG+G + G + SLI+G L DVV+TG+NGTI+GQG WW + S +R
Sbjct: 133 VAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKGITR 192
Query: 177 PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSD 236
P+ +E I S+NV +SN+T +++PA+NIHPVYC+NV ++ +++ AP +SP T GI PDS
Sbjct: 193 PYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCT 252
Query: 237 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 296
N IEDC + G D I++KSGWD++GI G PT + IRR+ S + +A GSEMSGG
Sbjct: 253 NTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMSGG 312
Query: 297 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDD 356
I +V++E I L + + I +T GRGGY++ I + + F G HP
Sbjct: 313 IKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASG 372
Query: 357 FDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS--LSINPGSYNSWEC 414
FDP A+P I I ++D+ N+T G + PF IC+SNI L+ P W C
Sbjct: 373 FDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKL-LWNC 431
Query: 415 SNIHGSSESVFPEPCPEL 432
++I G S V P+PC L
Sbjct: 432 TSISGVSSKVTPKPCSLL 449
>gi|3738338|gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 466
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/438 (44%), Positives = 270/438 (61%), Gaps = 7/438 (1%)
Query: 1 MKMPVALLLLLALCSAILINGE--VSDGQCD-DQPTLDPRPHSVSITEFGAVGDGKTLNT 57
++ +L++LA+ S ++ S G+ + + L+ R H+ +TEFGAVGDGKT NT
Sbjct: 2 IRTSFCILVVLAISSFSMMEARDLASKGKTNIEYMALNCRKHTAVLTEFGAVGDGKTSNT 61
Query: 58 LAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDV 117
AF+ AI L A GG QL VP GKWLTGSFNLTSH TLF++KGA IL SQ+ S + V
Sbjct: 62 KAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQDESEYPV 121
Query: 118 VDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLN-YSR 176
V PLPSYG+G + G + SLI+G L DVV+TG+NGTI+GQG WW + S +R
Sbjct: 122 VAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKGITR 181
Query: 177 PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSD 236
P+ +E I S+NV +SN+T +++PA+NIHPVYC+NV ++ +++ AP +SP T GI PDS
Sbjct: 182 PYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCT 241
Query: 237 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 296
N IEDC + G D I++KSGWD++GI G PT + IRR+ S + +A GSEMSGG
Sbjct: 242 NTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMSGG 301
Query: 297 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDD 356
I +V++E I L + + I +T GRGGY++ I + + F G HP
Sbjct: 302 IKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASG 361
Query: 357 FDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS--LSINPGSYNSWEC 414
FDP A+P I I ++D+ N+T G + PF IC+SNI L+ P W C
Sbjct: 362 FDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKL-LWNC 420
Query: 415 SNIHGSSESVFPEPCPEL 432
++I G S V P+PC L
Sbjct: 421 TSISGVSSKVTPKPCSLL 438
>gi|357494037|ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518642|gb|AET00266.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 450
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/432 (46%), Positives = 287/432 (66%), Gaps = 5/432 (1%)
Query: 5 VALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAI 64
+ LL L C +++ C + L R ++S+T+FG VGDG TLNT AF+ AI
Sbjct: 8 LTLLFLYTCCWVCVLSENNEVITCSNIVPLKYRTDNISLTDFGGVGDGHTLNTKAFREAI 67
Query: 65 FYLKSFADK-GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPS 123
+ + + + GG LYVP G +LT FNLTSH+TL L GAVI +Q+ S+W ++ PLPS
Sbjct: 68 YRINHLSQREGGTTLYVPPGVYLTEPFNLTSHMTLHLAAGAVIKATQDSSNWPLIAPLPS 127
Query: 124 YGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFI 183
YGRG E PG RY S I+G L+DVV+TG+NGTIDGQG VWW+ + ++L ++RP+LVEF+
Sbjct: 128 YGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGDVWWNMWRKRTLQFTRPNLVEFV 187
Query: 184 SSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDC 243
+S+++++SN+ F ++P +NIHPVYCSNV I+ ++ AP +SP T GI PDSS NVCIED
Sbjct: 188 NSKDIIISNVIFKDSPFWNIHPVYCSNVVIRFATILAPRDSPNTDGIDPDSSSNVCIEDS 247
Query: 244 IIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVE 303
I+ G D +++KSGWDEYGIAYGR ++++ IRRV SS + +A GSE SGG+ N+ E
Sbjct: 248 YISTGDDLVAVKSGWDEYGIAYGRSSSNITIRRV-SGSSPFAGIAVGSETSGGVENILAE 306
Query: 304 KIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALP 363
I+LY+ GI +T GRGGYI+ I +S+ + N G+ G H DD +D +ALP
Sbjct: 307 HINLYNMGIGIHIKTNIGRGGYIKNINVSNVYIENARKGIKISGDVGDHADDKYDSNALP 366
Query: 364 AIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN---SWECSNIHGS 420
+ IT ++ G + AG G++ +PF +ICLS+I+L G+ + SW+CS++ G
Sbjct: 367 IVKGITMANVWGVKVLQAGLIKGMKHSPFTDICLSDINLHGVNGTRSRTPSWQCSDVSGV 426
Query: 421 SESVFPEPCPEL 432
+ V P PC EL
Sbjct: 427 ALQVSPWPCSEL 438
>gi|226509250|ref|NP_001149385.1| LOC100283011 precursor [Zea mays]
gi|195626846|gb|ACG35253.1| polygalacturonase [Zea mays]
Length = 446
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/408 (46%), Positives = 261/408 (63%), Gaps = 3/408 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNT-LAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
R +S+ FGA GDG+TLNT + + +GG LYVP G WLTG FNLTSH
Sbjct: 40 RGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLTSH 99
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
+TLFL +GA++ +Q+ S W ++DPLP YGRG ELPG RY SLI+G+ L+DV +TG+NGT
Sbjct: 100 MTLFLARGAIVRATQDTSSWPLIDPLPXYGRGRELPGGRYMSLIHGHGLQDVFITGENGT 159
Query: 156 IDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
IDGQG VWWD + ++L ++RPHL+E + S +VVVSNL F ++P +NIHPVYCSNV I N
Sbjct: 160 IDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYCSNVVIAN 219
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
++V AP +SP T GI DSS NVC+EDC I+ G D IS+KSGWDEYG+A+GRP++ + +R
Sbjct: 220 LTVLAPHDSPNTDGIDLDSSSNVCVEDCYISAGDDLISIKSGWDEYGVAFGRPSSGITVR 279
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
R+ S + A GSE SGG+ +V E + G+ +T GRGG+IR + +S
Sbjct: 280 RI-TGSGPFAGFAVGSETSGGVEDVVAEHLSFSGVGVGVHVKTNSGRGGFIRNVTVSQVT 338
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
L G+ G HP ++ LP +D + +++ G N+ AG GI+++ F+NI
Sbjct: 339 LDGARYGLRIAGDVGGHPGASYNASLLPVVDGVAVRNVWGRNVRQAGLIRGIRDSVFSNI 398
Query: 396 CLSNISL-SINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSST 442
CLSN+ L I S W C + GS+ V P PC EL ++S T
Sbjct: 399 CLSNVKLYGIGSDSIGPWRCRAVSGSALDVQPSPCAELASTSGTGFCT 446
>gi|449452594|ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/436 (41%), Positives = 274/436 (62%), Gaps = 7/436 (1%)
Query: 6 ALLLLLALCSAILINGEVSDG-----QCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
+ + A+ + L + DG + +P RP ++T+FGAVGDG TLNT AF
Sbjct: 35 TVFWIAAVATIFLWQSTIGDGFFFLQRGSARPLPRLRPAVFNLTDFGAVGDGVTLNTKAF 94
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ AI + KGG QL VP+G+WLT FNLTSHLTLFL++GAVILG Q+ +W ++ P
Sbjct: 95 EKAILAISKLRTKGGGQLNVPAGRWLTAPFNLTSHLTLFLDEGAVILGIQDEKYWPLMPP 154
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLV 180
LPSYG G E G RY SLI+G LRDVV+TG NGTI GQG WW + + LN++R LV
Sbjct: 155 LPSYGYGREHIGPRYGSLIHGQNLRDVVITGHNGTISGQGKTWWKKYRQKLLNHTRGPLV 214
Query: 181 EFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP-PESPYTVGIVPDSSDNVC 239
+ + S ++++SN+T ++P + +HP C N+ I+N+++ AP ++P T GI PDS +++
Sbjct: 215 QIMWSRDILISNITLRDSPFWTLHPYDCKNITIRNVTILAPVHDAPNTDGIDPDSCEDML 274
Query: 240 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 299
IEDC I++G D I++KSGWD+YGIAYG+P+ ++ IR V+LQS + ++ GSEMSGG+S
Sbjct: 275 IEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIRNVVLQSMVSAGISIGSEMSGGVSG 334
Query: 300 VQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP 359
+ VE + +++S G+ +T GRGGY++ I + L + V + HPD+ +DP
Sbjct: 335 ITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDTVRVGIVIKTDYNEHPDEGYDP 394
Query: 360 DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHG 419
ALP + I+F I G + + G ++ P N+ ++S+ I + ++C+ +HG
Sbjct: 395 KALPVLKDISFTSIHGQGVRVPVRMHGSKDIPVRNVTFKDMSVGITYKKKHIFQCAFVHG 454
Query: 420 SS-ESVFPEPCPELEN 434
++FP PC L+
Sbjct: 455 RVIGTIFPAPCDNLDR 470
>gi|356547950|ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 491
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/440 (41%), Positives = 274/440 (62%), Gaps = 7/440 (1%)
Query: 2 KMPVALLLLLALCSAILINGEVSDG-----QCDDQPTLDPRPHSVSITEFGAVGDGKTLN 56
K + L + A S L ++ G +P RP + ++T+FG VGDG TLN
Sbjct: 29 KTLLTFLWIAAFASVFLWQRNIAGGFLVYGGIPARPMPMLRPMAFNLTDFGGVGDGVTLN 88
Query: 57 TLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWD 116
T AF+ A+ + F KGGAQL VP G+WLT FNLTSH+TLFL + AVILG + +W
Sbjct: 89 TEAFKRAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSHMTLFLAEDAVILGIDDEKYWP 148
Query: 117 VVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSR 176
++ PLPSYG G E PG RY SLI+G L+DVV+TG NGTI+GQG WW + + LN++R
Sbjct: 149 LMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGTINGQGQTWWKKYRQKRLNHTR 208
Query: 177 PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP-ESPYTVGIVPDSS 235
LV+ + S ++V++N+T ++P + +HP C N+ I+ +++ AP +P T GI PDS
Sbjct: 209 GPLVQIMFSSDIVITNITLRDSPFWTLHPYDCKNITIKGVTILAPVFGAPNTDGIDPDSC 268
Query: 236 DNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSG 295
+++ IEDC I++G DAI++KSGWD+YGIAYGRP+ ++ IR ++++S + ++ GSEMSG
Sbjct: 269 EDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMVSAGISIGSEMSG 328
Query: 296 GISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDD 355
G+SNV VE I ++DS G+ +T +GRG Y+RQI + N+ V + HPDD
Sbjct: 329 GVSNVMVENILIWDSRRGVRIKTARGRGAYVRQITYRNITFENVRVGIVMKTDYNEHPDD 388
Query: 356 DFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECS 415
+DP ALP + I+F + G + + G +E P N+ ++S+ + + ++C+
Sbjct: 389 GYDPMALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHIFQCA 448
Query: 416 NIHGSS-ESVFPEPCPELEN 434
+ G +++P PC L+
Sbjct: 449 FVQGRVIGTIYPAPCENLDR 468
>gi|357442057|ref|XP_003591306.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355480354|gb|AES61557.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 601
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/353 (52%), Positives = 249/353 (70%), Gaps = 4/353 (1%)
Query: 95 HLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
H + E AV+ QN W VVDPLPSYGRG ELPG R++SLI G L DV++TG+NG
Sbjct: 227 HYDIVCETNAVLCLLQNSEDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIITGNNG 286
Query: 155 TIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
TIDGQGS+WW F +++L+++RPHLVE I+S V++SN TFLN+P + IHPVYCSNV +Q
Sbjct: 287 TIDGQGSIWWSKFRNKTLDHTRPHLVELINSTEVLISNATFLNSPFWTIHPVYCSNVTVQ 346
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
N+++ P SP T GI PDSSDNVCIEDC I+ G D IS+KSGWDEYGI++GRP+T++ I
Sbjct: 347 NVTIIVPFGSPNTDGIDPDSSDNVCIEDCYISTGDDLISIKSGWDEYGISFGRPSTNISI 406
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
R+ +++S + +A GSEMSGG+S V E I+++DS + I +T+ GRGGY+R + IS+
Sbjct: 407 HRLTGRTTS-AGIAIGSEMSGGVSEVYAEDIYIFDSKSAIRIKTSPGRGGYVRNVYISNM 465
Query: 335 ELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFAN 394
L N+++A G G HPDD +D DALP I++IT ++IG NI AG GI+ F +
Sbjct: 466 TLINVDIAIRFTGLYGEHPDDSYDRDALPVIERITVVNVIGENIKRAGLIQGIKGDNFVD 525
Query: 395 ICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPEL-ENSSSNSSSTCFSL 446
ICLSNI+L+++ N W CS++ G SE V PE C +L E + S C+ L
Sbjct: 526 ICLSNITLNVSKN--NPWNCSDVKGYSELVSPESCEQLNERIFPDHVSNCYKL 576
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 80/108 (74%), Gaps = 2/108 (1%)
Query: 2 KMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQ 61
K+P L+L +C + S C + RPHSVSITEFGAVGDG TLNT AFQ
Sbjct: 45 KLPDVFLVLALICCSS--WTVWSSSSCKQINIKEVRPHSVSITEFGAVGDGITLNTKAFQ 102
Query: 62 NAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGS 109
NAIFYL S+ADKGGA+L+VP+G+WLTGSF+L SHLTL+L+K AVILGS
Sbjct: 103 NAIFYLNSYADKGGAKLFVPAGRWLTGSFDLISHLTLWLDKDAVILGS 150
>gi|449500524|ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/436 (41%), Positives = 274/436 (62%), Gaps = 7/436 (1%)
Query: 6 ALLLLLALCSAILINGEVSDG-----QCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
+ + A+ + L + DG + +P RP ++T+FGAVGDG TLNT AF
Sbjct: 35 TVFWIAAVATIFLWQSTIGDGFFFLQRGSARPLPRLRPAVFNLTDFGAVGDGVTLNTKAF 94
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ AI + KGG QL VP+G+WLT FNLTSHLTLFL++GAVILG Q+ +W ++ P
Sbjct: 95 EKAILAISKLRTKGGGQLNVPAGRWLTAPFNLTSHLTLFLDEGAVILGIQDEKYWPLMPP 154
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLV 180
LPSYG G E G RY SLI+G LRDVV+TG NGTI GQG WW + + LN++R LV
Sbjct: 155 LPSYGYGREHIGPRYGSLIHGQNLRDVVITGHNGTISGQGKTWWKKYRQKLLNHTRGPLV 214
Query: 181 EFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP-PESPYTVGIVPDSSDNVC 239
+ + S ++++SN+T ++P + +HP C N+ ++N+++ AP ++P T GI PDS +++
Sbjct: 215 QIMWSRDILISNITLRDSPFWTLHPYDCKNITVRNVTILAPVHDAPNTDGIDPDSCEDML 274
Query: 240 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 299
IEDC I++G D I++KSGWD+YGIAYG+P+ ++ IR V+LQS + ++ GSEMSGG+S
Sbjct: 275 IEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIRNVVLQSMVSAGISIGSEMSGGVSG 334
Query: 300 VQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP 359
+ VE + +++S G+ +T GRGGY++ I + L + V + HPD+ +DP
Sbjct: 335 ITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDTVRVGIVIKTDYNEHPDEGYDP 394
Query: 360 DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHG 419
ALP + I+F I G + + G ++ P N+ ++S+ I + ++C+ +HG
Sbjct: 395 KALPVLKDISFTSIHGQGVRVPVRMHGSKDIPVRNVTFKDMSVGITYKKKHIFQCAFVHG 454
Query: 420 SS-ESVFPEPCPELEN 434
++FP PC L+
Sbjct: 455 RVIGTIFPAPCDNLDR 470
>gi|224077474|ref|XP_002305262.1| predicted protein [Populus trichocarpa]
gi|222848226|gb|EEE85773.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 186/405 (45%), Positives = 258/405 (63%), Gaps = 6/405 (1%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R HS +T+FGAVGDGKT NT AF AI L +A GGAQL VP+GKWLTGSFNLTSH
Sbjct: 10 RKHSAVLTDFGAVGDGKTSNTKAFAEAIKKLSKYAPDGGAQLIVPAGKWLTGSFNLTSHF 69
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYG--RGIELPGRRYKSLINGYMLRDVVVTGDNG 154
TLFL K AV+L SQ+ W ++ PLPSYG R + GR LI + DV++TG+NG
Sbjct: 70 TLFLHKDAVLLASQDEDEWPLLTPLPSYGGVRENAVFGRP-GGLIFASNVTDVIITGNNG 128
Query: 155 TIDGQGSVWWDWFSSQSLN-YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHI 213
T+DGQG+VWW+ F+ + L RP+L+E + S+ V +SN+T +N+P +++HP+Y SN+ I
Sbjct: 129 TVDGQGAVWWEKFNEKKLKKLERPYLIEIMYSDQVQISNITLINSPQWHVHPIYSSNLWI 188
Query: 214 QNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVH 273
Q +++ AP + P T GI PDS NV IEDC I G D I++KSG D+YGI G P +
Sbjct: 189 QGVTILAPVDVPNTDGINPDSCTNVIIEDCYIVSGDDCIAVKSGLDQYGIKVGMPMKQLV 248
Query: 274 IRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD 333
IRR+ S +++A GSEMSGGI +V++E I ++ + + +T GRGGY++ I +
Sbjct: 249 IRRITCISPKSAAIALGSEMSGGIEDVRIEDITAINTESAVRVKTAVGRGGYVKDIFVRR 308
Query: 334 AELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEA-PF 392
L + F G+ SH D+ +DP ALP I I F+DI N+TI G G+ E PF
Sbjct: 309 MTLKTMKYVFWMIGSYSSHADEGYDPKALPEITNINFRDIAADNVTIPGKLEGLGEGNPF 368
Query: 393 ANICLSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELENSS 436
IC+SN+++++ +W C+++ G S +V P PC L S
Sbjct: 369 TGICISNVTMTLAEKHKEPAWNCTDVSGVSSNVTPMPCAALPKKS 413
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
gi|222833326|gb|EEE71803.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 178/406 (43%), Positives = 264/406 (65%), Gaps = 2/406 (0%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
+P RP + ++T+FGAVGDG T+NT AF+ A+ + + +GG QL VP G+WLT F
Sbjct: 67 RPMPQLRPVAFNLTDFGAVGDGATVNTEAFERAVSAISKLSKRGGGQLNVPPGRWLTAPF 126
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
NLTSH+TLFL +GAVILG Q+ +W ++ LPSYG G E PG RY SLI+G LRDVV+T
Sbjct: 127 NLTSHMTLFLAEGAVILGIQDEKYWPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVIT 186
Query: 151 GDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSN 210
G NGTIDGQG WW + + LN++R LV+ + S ++V +N+T ++P + +HP C N
Sbjct: 187 GHNGTIDGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFTNITLRDSPFWTLHPYDCKN 246
Query: 211 VHIQNISVHAPP-ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
V I+N+++ AP E+P T GI PDS +++ IEDC I++G DAI++KSGWD+YGIAYGRP+
Sbjct: 247 VTIRNVTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPS 306
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQI 329
T++ IR ++++S + ++ GSEMSGG+SNV VE + ++ S + +T GRGGY+R I
Sbjct: 307 TNILIRNLVVRSMVSAGISIGSEMSGGVSNVTVENVLVWSSRRAVRIKTAPGRGGYVRHI 366
Query: 330 VISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQE 389
+ N+ V + HPD+ +DP A+P + I+F I G + + G QE
Sbjct: 367 TYRNLTFDNVRVGIVIKTDYNEHPDEGYDPKAVPILGDISFTGIHGQGVRVPVRIHGSQE 426
Query: 390 APFANICLSNISLSINPGSYNSWECSNIHGSS-ESVFPEPCPELEN 434
P N+ ++S+ + + ++C+ + G +VFP PC L+
Sbjct: 427 IPVRNVTFWDMSVGLTYKKKHIFQCAFVQGRVIGTVFPAPCENLDR 472
>gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
gi|300159188|gb|EFJ25809.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
Length = 468
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 173/402 (43%), Positives = 264/402 (65%), Gaps = 2/402 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADK-GGAQLYVPSGKWLTGSFNLTSH 95
RP ++T+FG +GDG+T+NT AF+ A+ + S A K GGAQL VP+G WLT FNLTSH
Sbjct: 47 RPVVFNLTDFGGIGDGRTINTRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSH 106
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
+TLFLE+ A IL +Q+ W ++ PLPSYGRG ELPG RY SLI+G L D+V+TG NGT
Sbjct: 107 MTLFLEEDATILATQSEDLWPLMQPLPSYGRGRELPGPRYGSLIHGQHLEDIVITGHNGT 166
Query: 156 IDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
IDG G WW+ + L ++R L++F+ S + +S++T N+P + +HP C NV I+
Sbjct: 167 IDGNGRKWWEKAKLKQLKHTRGRLIQFMWSRGIEISDVTLRNSPFWTVHPYDCENVTIRG 226
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
+++ APP++P T GI PDS NV IE+C I++G D +++KSGWD+YGI YG+P ++ IR
Sbjct: 227 VTIIAPPDAPNTDGIDPDSCRNVLIENCYISVGDDGVAVKSGWDQYGIDYGKPCANITIR 286
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
+ + + + V+ GSEMSGGI+NV VE +++++S G+ +TT GRGGY+ Q+ +
Sbjct: 287 NIQVNAPVSAGVSIGSEMSGGITNVTVENVYIWNSKRGVRIKTTPGRGGYVTQVFYRNIT 346
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
+ + V + G HPD+ +DP ALP +++I F I G+ + I G +E P +
Sbjct: 347 METVRVGIVIKTDYGDHPDEFYDPTALPVVEKIFFDGIYGSEVRIPARIYGSKEVPVRGL 406
Query: 396 CLSNISLSINPGSYNSWECSNIHGSS-ESVFPEPCPELENSS 436
+ ++++ + + ++CS + G ++FP+PC +L SS
Sbjct: 407 EIRDMNVGVTRKKKHVFQCSFLQGQVFGTIFPKPCEDLGTSS 448
>gi|356565754|ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
Length = 492
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/440 (41%), Positives = 274/440 (62%), Gaps = 7/440 (1%)
Query: 2 KMPVALLLLLALCSAIL-----INGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLN 56
K + LL + A S L + G + G +P RP + ++T+FG VGDG TLN
Sbjct: 30 KTLLTLLWIAAFASVFLWQRNIVGGFLVYGGIPGRPMPMLRPMAFNLTDFGGVGDGVTLN 89
Query: 57 TLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWD 116
T AF+ A+ + F KGGAQL VP G+WLT FNLTSH+TLFL + AVILG + +W
Sbjct: 90 TEAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSHMTLFLAEDAVILGIDDEKYWP 149
Query: 117 VVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSR 176
++ PLPSYG G E PG RY SLI+G L+DVV+TG NGTI+GQG WW + + LN++R
Sbjct: 150 LMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGTINGQGQSWWKKYRQKRLNHTR 209
Query: 177 PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP-ESPYTVGIVPDSS 235
LV+ + S ++V++N+T ++P + IHP C N+ I+ +++ AP +P T GI PDS
Sbjct: 210 GPLVQIMFSSDIVITNITLRDSPFWTIHPYDCKNITIKGVTILAPVFGAPNTDGIDPDSC 269
Query: 236 DNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSG 295
+++ IEDC I++G DAI++KSGWD+YGI YGRP+ ++ IR ++++S + ++ GSEMSG
Sbjct: 270 EDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMIRNLVVRSMVSAGISIGSEMSG 329
Query: 296 GISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDD 355
G+SNV VE + ++DS G+ +T GRG Y+RQI + N+ V + HPDD
Sbjct: 330 GVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNITFENVRVGIVMKTDYNEHPDD 389
Query: 356 DFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECS 415
+DP ALP + I+F + G + + G +E P N+ ++S+ + + ++C+
Sbjct: 390 GYDPLALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRNVTFKDMSVGLTYKKKHIFQCA 449
Query: 416 NIHGSS-ESVFPEPCPELEN 434
+ G +++P PC L+
Sbjct: 450 FVQGRVIGTIYPAPCENLDR 469
>gi|413948635|gb|AFW81284.1| hypothetical protein ZEAMMB73_960645 [Zea mays]
Length = 458
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/420 (45%), Positives = 262/420 (62%), Gaps = 15/420 (3%)
Query: 37 RPHSVSITEFGAVGDGKTLNT-LAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
R +S+ FGA GDG+TLNT + + +GG LYVP G WLTG FNLTSH
Sbjct: 40 RGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLTSH 99
Query: 96 LTLFLEKGAVI------------LGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM 143
+TLFL +GA++ + Q+ S W ++DPLPSYGRG ELPG RY SLI+G+
Sbjct: 100 MTLFLARGAIVRATQPCLATIELISEQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGHG 159
Query: 144 LRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNI 203
L+DV +TG+NGTIDGQG VWWD + ++L ++RPHL+E + S +VVVSNL F ++P +NI
Sbjct: 160 LQDVFITGENGTIDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNI 219
Query: 204 HPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGI 263
HPVYCSNV I N++V AP +SP T GI DSS NVC+EDC I+ G D IS+KSGWDEYG+
Sbjct: 220 HPVYCSNVVIANLTVLAPHDSPNTDGIDLDSSSNVCVEDCYISAGDDLISIKSGWDEYGV 279
Query: 264 AYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG 323
A+GRP++ + +RR+ S + A GSE SGG+ +V E + G+ +T GRG
Sbjct: 280 AFGRPSSGITVRRI-TGSGPFAGFAVGSETSGGVEDVVAEHLSFSGVGVGVHVKTNSGRG 338
Query: 324 GYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGN 383
G+IR + +S L G+ G HP ++ LP ID + +++ G N+ AG
Sbjct: 339 GFIRNVTVSQVTLDGARYGLRIAGDVGGHPGASYNASLLPVIDGVAVRNVWGRNVRQAGL 398
Query: 384 FTGIQEAPFANICLSNISL-SINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSST 442
GI+++ F+NICLSN+ L I S W C + GS+ V P PC EL ++S T
Sbjct: 399 IRGIRDSVFSNICLSNVKLYGIGSDSIGPWRCRAVSGSALDVQPSPCAELASTSGTGFCT 458
>gi|168021522|ref|XP_001763290.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685425|gb|EDQ71820.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 367 bits (941), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 175/407 (42%), Positives = 259/407 (63%), Gaps = 1/407 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RPH ++T+FGAVGDG ++NT F++AI +K A GGAQL V G+WLT FN+TSH+
Sbjct: 33 RPHVFNLTDFGAVGDGYSVNTRCFEDAIAAIKERASDGGAQLIVGPGRWLTAPFNVTSHM 92
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL +GA I+ Q+ W ++ LPSYGRG ELPG RY SLI+G + D V+TG NG+I
Sbjct: 93 TLFLSRGATIVAIQDAGLWPILPALPSYGRGRELPGLRYSSLIHGQHVEDFVLTGHNGSI 152
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG WW+ + L Y+R LVE + S N+V+S++T N+P +++HP C+NV I +
Sbjct: 153 DGQGGWWWEQHKQKRLRYTRGRLVELMWSTNIVISDVTLQNSPFWHLHPYDCTNVTISGV 212
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP ++P T GI PDS NV +E+C I++G DA+++KSGWD+YGI Y RP +V IR
Sbjct: 213 TILAPLDAPNTDGIDPDSCKNVLVENCYISVGDDAVAVKSGWDKYGIEYNRPCVNVTIRN 272
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V+ +S + ++ GSEMSGG+ V VE ++++ S GI +T+ GRGGY++ I+ + L
Sbjct: 273 VIARSQISAGISIGSEMSGGVEQVLVEDVYIWGSRRGIRIKTSPGRGGYVKNILYKNLTL 332
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
++ V + G HPD DFDP ALP + I+F + G+++ G +E P I
Sbjct: 333 IDVRVGIVVKTDYGEHPDLDFDPKALPVVANISFDGVYGSSVRYPVRMFGSKEVPITGID 392
Query: 397 LSNISLSINPGSYNSWECSNIHGS-SESVFPEPCPELENSSSNSSST 442
+ N+++ + N + C + G VFP PC L ++ ++T
Sbjct: 393 IRNMNVGLTRKKRNVFTCDFLQGRVVGKVFPSPCKALIREEASQTAT 439
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
gi|222866162|gb|EEF03293.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 176/406 (43%), Positives = 263/406 (64%), Gaps = 2/406 (0%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
+P RP + ++T+FGAVGDG TLNT AF+ A+ + A +GG QL VP GKWLT F
Sbjct: 67 RPIPKLRPVAFNLTDFGAVGDGVTLNTEAFERAVSAISKLARRGGGQLNVPPGKWLTAPF 126
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
NLTSH+TLFL + AVILG Q+ ++W ++ PLPSYG G E PG RY SLI+G LRD+V+T
Sbjct: 127 NLTSHMTLFLAEDAVILGIQDENYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLRDIVIT 186
Query: 151 GDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSN 210
G NGTIDGQG WW + + LN++R LV+ + S ++V N+T N+P + +HP C N
Sbjct: 187 GHNGTIDGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFMNITLRNSPFWTLHPYDCKN 246
Query: 211 VHIQNISVHAPP-ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
V I+N+++ AP E+P T GI PDS +++ IEDC I++G DAI++KSGWD+YGIAYGRP+
Sbjct: 247 VTIRNVTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPS 306
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQI 329
T++ IR ++++S + ++ GSEMSGG+S+V VE + ++ S + +T GRG Y+R I
Sbjct: 307 TNILIRNLVVRSMVSAGISIGSEMSGGVSSVTVENLLVWSSRRAVRIKTAPGRGAYVRNI 366
Query: 330 VISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQE 389
+ ++ V + HPD+ +DP A+P + I+F I G + + G +E
Sbjct: 367 TYRNLTFDDVRVGIVIKTDYNEHPDEGYDPKAVPTLQDISFSGIHGQGVRVPVRIHGSEE 426
Query: 390 APFANICLSNISLSINPGSYNSWECSNIHGSS-ESVFPEPCPELEN 434
P N+ ++S+ + + ++C+ + G ++FP PC L+
Sbjct: 427 IPVRNVTFQDMSVGLTYKKKHIFQCAFVQGRVIGTIFPAPCENLDR 472
>gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
gi|300138547|gb|EFJ05311.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
Length = 468
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 171/402 (42%), Positives = 261/402 (64%), Gaps = 2/402 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADK-GGAQLYVPSGKWLTGSFNLTSH 95
RP ++T+FG +GDG+T+NT AF+ A+ + S A K GGAQL VP+G WLT FNLTSH
Sbjct: 47 RPVVFNLTDFGGIGDGRTINTRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSH 106
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
+TLFLE+ A IL +Q+ W ++ PLPSYGRG ELPG RY SLI+G L D+V+TG NGT
Sbjct: 107 MTLFLEEDATILATQSEDLWPLMQPLPSYGRGRELPGPRYGSLIHGQHLEDIVITGHNGT 166
Query: 156 IDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
IDG G WW+ + L ++R L++ + S + +S++T N+P + +HP C NV I+
Sbjct: 167 IDGNGRKWWEKAKRKQLKHTRGRLIQLMWSRGIEISDVTLRNSPFWTVHPYDCENVTIRG 226
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
+++ APP++P T GI PDS NV IE C I++G D +++KSGWD+YGI YG+P ++ IR
Sbjct: 227 VTIIAPPDAPNTDGIDPDSCRNVLIESCYISVGDDGVAVKSGWDQYGIDYGKPCANITIR 286
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
+ + + + V+ GSEMSGGI+NV VE + +++S G+ +TT GRGGY+ Q+ +
Sbjct: 287 NIQVNAPVSAGVSIGSEMSGGITNVTVENVFIWNSKRGVRIKTTPGRGGYVTQVFYRNIT 346
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
+ + V + G HPD+ +DP ALP +++I F I G+ + I G +E P +
Sbjct: 347 METVRVGIVIKTDYGDHPDEFYDPTALPVVEKIFFDGIYGSEVRIPARIYGSKEVPVRGL 406
Query: 396 CLSNISLSINPGSYNSWECSNIHGSS-ESVFPEPCPELENSS 436
+ ++++ + + ++CS + G ++FP+PC +L S+
Sbjct: 407 EIRDMNVGVTRKKKHVFQCSFLQGEVFGTIFPKPCEDLGTST 448
>gi|357450133|ref|XP_003595343.1| Polygalacturonase [Medicago truncatula]
gi|355484391|gb|AES65594.1| Polygalacturonase [Medicago truncatula]
gi|388518965|gb|AFK47544.1| unknown [Medicago truncatula]
Length = 474
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 183/437 (41%), Positives = 275/437 (62%), Gaps = 8/437 (1%)
Query: 6 ALLLLLALCSAIL------INGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLA 59
L++ AL S L ING + G+ + RP ++T+FG VGDG TLNT A
Sbjct: 15 VFLIIAALGSVFLVWQRNVINGFLVLGEELNWEAPKLRPVVFNLTDFGGVGDGVTLNTKA 74
Query: 60 FQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVD 119
F+ A+ + F ++GGAQL VP G WLT FNLTS +TLFL + AVIL Q+ +W ++
Sbjct: 75 FERAVSVISKFRNQGGAQLNVPPGFWLTSPFNLTSRMTLFLARDAVILAVQDEKYWPLMP 134
Query: 120 PLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHL 179
LPSYG G E PG RY SLI+G L+DVV+TG NGTI+GQG WW + LNY+R L
Sbjct: 135 ALPSYGYGREHPGPRYSSLIHGQNLKDVVITGHNGTINGQGQTWWTKHLHKLLNYTRGPL 194
Query: 180 VEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP-ESPYTVGIVPDSSDNV 238
V+ + S ++V+SN+T ++P + +HP C NV I+N+++ AP +P T GI PDS +++
Sbjct: 195 VQIMYSSDIVISNITLRDSPFWTLHPYDCKNVTIKNVTILAPVYHAPNTDGIDPDSCEDM 254
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
IEDC I++G DAI++KSGWD+YGIAY +P+ ++ IR ++++S+ + ++ GSEMSGG+S
Sbjct: 255 LIEDCYISVGDDAIAIKSGWDQYGIAYAKPSKNIIIRNLVVRSNVSAGISIGSEMSGGVS 314
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD 358
NV +E I +++S I +T GRGGY+RQI + +N+ V + HPDD +D
Sbjct: 315 NVTIENILVWESRRAIRIKTAPGRGGYVRQITYRNITFHNVRVGIVIKTDYNEHPDDGYD 374
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIH 418
P ALP + I+F +I G + + TG +E P N+ ++++ I + ++C+ +
Sbjct: 375 PTALPILRDISFTNIRGEGVRVPVRITGSEEIPVRNVTFHDMNVGITYKKKHIFQCAFVE 434
Query: 419 GSS-ESVFPEPCPELEN 434
G ++FP+PC +
Sbjct: 435 GRVIGTIFPKPCRNFDQ 451
>gi|356565756|ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
Length = 491
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 183/440 (41%), Positives = 274/440 (62%), Gaps = 8/440 (1%)
Query: 2 KMPVALLLLLALCSAIL-----INGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLN 56
K + LL + A S L + G + G +P RP + ++T+FG VGDG TLN
Sbjct: 30 KTLLTLLWIAAFASVFLWQRNIVGGFLVYGGIPGRPMPMLRPMAFNLTDFGGVGDGVTLN 89
Query: 57 TLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWD 116
T AF+ A+ + F KGGAQL VP G+WLT FNLTSH+TLFL + AVILG + +W
Sbjct: 90 TEAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSHMTLFLAEDAVILGIDDEKYWP 149
Query: 117 VVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSR 176
++ PLPSYG G E PG RY SLI+G L+DVV+TG NGTI+GQG WW + + LN++R
Sbjct: 150 LMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGTINGQGQSWWKKYRQKRLNHTR 209
Query: 177 PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP-ESPYTVGIVPDSS 235
LV+ + S ++V++N+T ++P + IHP C N+ I+ +++ AP +P T GI PDS
Sbjct: 210 GPLVQIMFSSDIVITNITLRDSPFWTIHPYDCKNITIKGVTILAPVFGAPNTDGIDPDSC 269
Query: 236 DNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSG 295
+++ IEDC I++G DAI++KSGWD+YGI YGRP+ ++ IR L++S+ + ++ GSEMSG
Sbjct: 270 EDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMIRN-LVKSTPFAGISIGSEMSG 328
Query: 296 GISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDD 355
G+SNV VE + ++DS G+ +T GRG Y+RQI + N+ V + HPDD
Sbjct: 329 GVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNITFENVRVGIVMKTDYNEHPDD 388
Query: 356 DFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECS 415
+DP ALP + I+F + G + + G +E P N+ ++S+ + + ++C+
Sbjct: 389 GYDPLALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRNVTFKDMSVGLTYKKKHIFQCA 448
Query: 416 NIHGSS-ESVFPEPCPELEN 434
+ G +++P PC L+
Sbjct: 449 FVQGRVIGTIYPAPCENLDR 468
>gi|357139453|ref|XP_003571296.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 485
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 181/408 (44%), Positives = 262/408 (64%), Gaps = 5/408 (1%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGA--QLYVPSGKWLTGSFNLTS 94
R S S+ EFGAVGDG T NT AF+ A+ L+ A G L VP G+WLTGSFNLTS
Sbjct: 73 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEQRAAAAGGGAMLEVPPGRWLTGSFNLTS 132
Query: 95 HLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
TLFL GAVILGSQ+P W ++ PLPSYGRG E G R+ SLI+G L DVV+TG NG
Sbjct: 133 RFTLFLHHGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGENLDDVVITGSNG 192
Query: 155 TIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
TIDGQG +WW+ + +++LN++R HL+E ++S NV++SN+T N+P + +HPVYC NV I+
Sbjct: 193 TIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVMISNVTLRNSPFWTVHPVYCRNVVIK 252
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
++++ AP +P T GI PDSS +VCIEDC I G D +++KSGWD+YGI+ +P+T++ I
Sbjct: 253 DLTILAPLNAPNTDGIDPDSSSDVCIEDCYIESGDDLVAIKSGWDQYGISVNKPSTNIII 312
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
+RV + + S V GSEMSGG+S V + +H+++S + + +T GRGG++ + +++
Sbjct: 313 QRVSGTTPTCSGVGIGSEMSGGVSGVLIRDLHVWNSASAVRIKTDVGRGGFVTNVTVANV 372
Query: 335 ELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFAN 394
+ + V H DD +D ALP I + DI+G ++ A + A +
Sbjct: 373 TMERVKVPIRFSRGSDDHSDDKYDRTALPTISDVRIVDIVGVDVQRAPILEAVHGAVYEG 432
Query: 395 ICLSNIS---LSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNS 439
IC N+S + W+C +++G + VFPE C EL ++ S+S
Sbjct: 433 ICFRNVSLRLREEVRRRHAGWQCESVYGEAHGVFPEACEELRHNGSSS 480
>gi|297801376|ref|XP_002868572.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314408|gb|EFH44831.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 205/444 (46%), Positives = 280/444 (63%), Gaps = 8/444 (1%)
Query: 2 KMPVALLLLLALCSAILINGEVSDG---QCDDQPTLDPRPHSVSITEFGAVGDGKTLNTL 58
+ P+++ +L L + ++ +S G C + R +SI +FGAVGDGKTLNT
Sbjct: 5 RAPISVCVLFLLST--VLPHHLSLGAPITCSGIVPMKHRTEMLSIFDFGAVGDGKTLNTN 62
Query: 59 AFQNAIFYLK-SFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDV 117
AF AI ++ S G L+VP G +LT SFNLTSH+TL+L GAVI Q+ W +
Sbjct: 63 AFNTAIDRIRNSNNSSQGTLLHVPRGVYLTQSFNLTSHMTLYLADGAVIKAVQDTGKWRL 122
Query: 118 VDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRP 177
DPLPSYGRG E PGRRY S I+G L DVV+TG NGTIDGQG WW+ + +L ++RP
Sbjct: 123 TDPLPSYGRGRERPGRRYISFIHGDGLNDVVITGRNGTIDGQGEPWWNMWRHGTLEFTRP 182
Query: 178 HLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDN 237
L+EF +S N+VVS++ N+ + +HPVYCSNV + ++++ AP +S T GI PDSS N
Sbjct: 183 GLIEFKNSTNIVVSHVVLQNSAFWTLHPVYCSNVVVHHVTILAPTDSFNTDGIDPDSSSN 242
Query: 238 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 297
VCIED I+ G D +++KSGWDEYGIAY P+ D+ IRR+ SS + +A GSE SGGI
Sbjct: 243 VCIEDSYISTGDDLVAVKSGWDEYGIAYNLPSRDITIRRI-TGSSPFAGIAIGSETSGGI 301
Query: 298 SNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDF 357
NV VE I LY+S GI +T GRGG I+ I IS L + G+ G HPDD F
Sbjct: 302 QNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKISGDTGDHPDDKF 361
Query: 358 DPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNI 417
+ ALP + IT K++ G + AG G++++PF N+C SN++L+ S W+CS++
Sbjct: 362 NTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTLT-GTKSTPIWKCSDV 420
Query: 418 HGSSESVFPEPCPELENSSSNSSS 441
G++ V P PCPEL ++ S
Sbjct: 421 VGAASKVNPTPCPELTTTTQQGGS 444
>gi|356530447|ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 180/435 (41%), Positives = 269/435 (61%), Gaps = 7/435 (1%)
Query: 2 KMPVALLLLLALCSAIL-----INGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLN 56
K +A L + L S +L I+G + G + RP +TEFG VGDG TLN
Sbjct: 32 KTLLAFLWVATLASVLLWQRTTISGFLVQGGVPVRAPPKLRPVVFCLTEFGGVGDGVTLN 91
Query: 57 TLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWD 116
T AF+ + + DKGG QL VP G+WLT FNLTSH+TLFL + +VIL Q+ +W
Sbjct: 92 TEAFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLTSHMTLFLARDSVILAVQDEKYWP 151
Query: 117 VVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSR 176
++ LPSYG G E PG RY SLI+G LRDVV+TG NGTI+GQG WW + + LN++R
Sbjct: 152 LMPALPSYGYGREHPGPRYSSLIHGQNLRDVVITGHNGTINGQGQTWWTKYRQKLLNHTR 211
Query: 177 PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP-PESPYTVGIVPDSS 235
LV+ + S N+V+SN+T ++P + +HP C NV ++N+++ AP +P T GI PDS
Sbjct: 212 GPLVQILWSSNIVISNITLRDSPFWTLHPYDCKNVTVKNVTILAPVSHAPNTDGIDPDSC 271
Query: 236 DNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSG 295
+++ IEDC I++G DAI++KSGWD+YGI YGRP+ ++ IR ++++S+ + ++ GSEMSG
Sbjct: 272 EDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRSNVSAGISIGSEMSG 331
Query: 296 GISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDD 355
G+SNV VE I +++S + +T GRGGY+RQI + N+ V + HP
Sbjct: 332 GVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMFKNVRVGIVIKTDYNEHPGT 391
Query: 356 DFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECS 415
+DP ALP + I+F +I G + + G ++ P N+ ++ + I + ++C+
Sbjct: 392 GYDPRALPILRDISFINIRGQGVRVPVRIQGSEQIPVRNVTFQDMKIGITYKKKHIFQCA 451
Query: 416 NIHGSS-ESVFPEPC 429
+ G + ++FP PC
Sbjct: 452 FVQGQAIGTIFPSPC 466
>gi|225444665|ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
gi|297738532|emb|CBI27777.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 175/419 (41%), Positives = 267/419 (63%), Gaps = 2/419 (0%)
Query: 18 LINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQ 77
++ G ++ + +P RP ++T+FG VGD T+NT AF+ AI + KGG Q
Sbjct: 52 IVEGLLTFRRAPARPLPRLRPAVYNLTDFGGVGDSVTVNTEAFERAISAISKLGKKGGGQ 111
Query: 78 LYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKS 137
L VP+G WLT FNLTSH+TLFL++ AVILG Q+ +W ++ PLPSYG G E G RY S
Sbjct: 112 LNVPAGNWLTAPFNLTSHMTLFLDQDAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGS 171
Query: 138 LINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLN 197
LI+G L+DVV+TG NGTI+GQG WW + + LN++R LV+ + S ++V+SN+T +
Sbjct: 172 LIHGQNLKDVVITGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRD 231
Query: 198 APAYNIHPVYCSNVHIQNISVHAPP-ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKS 256
+P + +HP C NV I+N+++ AP E+P T GI PDS +++ IEDC I++G D I++KS
Sbjct: 232 SPFWTLHPYDCKNVTIKNVTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKS 291
Query: 257 GWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEF 316
GWD+YG+AYGRP+ ++ IR ++++S + V+ GSEMSGG+SNV VE + +++S +
Sbjct: 292 GWDQYGVAYGRPSVNILIRNLVIRSMVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVRI 351
Query: 317 RTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGT 376
+T+ GRGGY++ I + N+ V + HPDD FDP ALP ++ I+F + G
Sbjct: 352 KTSPGRGGYVQHINYRNLTFDNVRVGIVIKTDYNEHPDDGFDPKALPILEDISFTGVHGQ 411
Query: 377 NITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSS-ESVFPEPCPELEN 434
+ + G +E P + ++S+ I + ++C+ + G +VFP PC L+
Sbjct: 412 GVRVPVRIHGSEEIPVKKVTFRDMSVGITYKKKHIFQCAYVEGRVIGTVFPAPCENLDR 470
>gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520253|dbj|BAK07385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 179/405 (44%), Positives = 266/405 (65%), Gaps = 2/405 (0%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
+P RP + ++T+FG VGDG+T+NT AF+ A+ + +FAD+GGAQL VP G+WLTG F
Sbjct: 67 RPAPRLRPMAYNLTDFGGVGDGRTVNTRAFERAVETITAFADRGGAQLNVPPGRWLTGPF 126
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
NLTSH+TLFL +GA ILG + +W ++ LPSYG G E G R+ SLI+G L+DVV+T
Sbjct: 127 NLTSHMTLFLAEGAEILGITDEKNWPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVIT 186
Query: 151 GDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSN 210
G NG+I+GQG VWW + L +RP LV+ + S+++VV+N+T N+P ++ HP C+N
Sbjct: 187 GYNGSINGQGEVWWLKHRRRMLKNTRPPLVQLMWSKDIVVTNITLRNSPFWHFHPYDCTN 246
Query: 211 VHIQNISVHAPPE-SPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
V + N+++ +P +P T GI PDS ++V IE+C I++G DAI++KSGWD+YGIAYGR +
Sbjct: 247 VTVSNVTILSPISGAPNTDGIDPDSCEDVLIENCYISVGDDAIAIKSGWDQYGIAYGRSS 306
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQI 329
+++ IR V ++S + ++ GSEMSGG++N+ VE +H++DS G+ +T GRGGYIR I
Sbjct: 307 SNILIRNVTVRSLVSAGISIGSEMSGGVANITVENVHIWDSRRGVRIKTAIGRGGYIRNI 366
Query: 330 VISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQE 389
S+ N+ + H DD +D +A P I I+FK I G + + G
Sbjct: 367 SYSNITFDNVRAGIVIKVDYNEHADDGYDRNAFPDITGISFKKIHGRGVRVPVRAHGSNY 426
Query: 390 APFANICLSNISLSINPGSYNSWECSNIHGSS-ESVFPEPCPELE 433
P +I ++S+ I+ + ++CS I G SVFP+PC L+
Sbjct: 427 IPIKDITFQDMSVGISYKKKHIFQCSYIEGRVIGSVFPKPCENLD 471
>gi|297742230|emb|CBI34379.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/408 (45%), Positives = 245/408 (60%), Gaps = 48/408 (11%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R HS S+T+FG VGDG T NT AFQ AI +L FA GG+QL+VP G+WLTGSFNLTSH
Sbjct: 49 RAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTGSFNLTSHF 108
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L K AV+L SQ+ W V+DPLPSYGRG + G RY SLI G L DVV+TG+NGTI
Sbjct: 109 TLYLHKDAVLLASQDEHEWPVIDPLPSYGRGRDTQGGRYISLIFGTNLTDVVITGENGTI 168
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG++WW F L Y+RP+L+E + S+NV +S+LT +N+P++N+HPVY SNV IQ +
Sbjct: 169 DGQGALWWAKFHKGELKYTRPYLIEIMHSDNVQISSLTLVNSPSWNVHPVYSSNVIIQGL 228
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI PDS N IEDC I G D I++KSGWDEYGIAYG PT + IRR
Sbjct: 229 TITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRR 288
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ S +++A GSEMSGGI +V+ E I D+ +G+ +T
Sbjct: 289 LTCISPFSATIALGSEMSGGIEDVRAEDILAIDTESGVRIKTAG---------------- 332
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
I ++D++ N+T+AG GI PF IC
Sbjct: 333 -------------------------------INYRDMVAENVTMAGRLEGISGDPFTGIC 361
Query: 397 LSNISLSINPGSYNS-WECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
+SN+++ + + + W C++I G + V P+PC L + C
Sbjct: 362 ISNVTIGLAKKAKKAPWTCTDIAGITSGVVPQPCDLLPDQGPEKIVAC 409
>gi|357137810|ref|XP_003570492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 496
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 182/430 (42%), Positives = 271/430 (63%), Gaps = 4/430 (0%)
Query: 8 LLLLALCSAILINGEVSDG--QCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIF 65
L+ L +++L+ G G +P RP + ++T+FG VGDG+TLNT AF+ A+
Sbjct: 43 LVFLWQSTSVLVRGGAGLGLRSASWRPPPRLRPGAYNLTDFGGVGDGRTLNTQAFERAVE 102
Query: 66 YLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYG 125
+ + AD+GG QL VP G+WLT FNLTSH+TLFL +GA ILG + +W ++ LPSYG
Sbjct: 103 AIAALADRGGGQLNVPPGRWLTAPFNLTSHMTLFLAEGAEILGITDEKYWTLMPALPSYG 162
Query: 126 RGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISS 185
G E G RY SLI+G L+DVV+TG NG+I+GQG VWW + L +RP LV+ + S
Sbjct: 163 YGRERKGPRYGSLIHGQNLKDVVITGYNGSINGQGEVWWLKHRRRMLKNTRPPLVQLMWS 222
Query: 186 ENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPE-SPYTVGIVPDSSDNVCIEDCI 244
+++V+N+T N+P ++ HP C+NV + N+++ AP +P T GI PDS +V IE+C
Sbjct: 223 SDIIVTNITLRNSPFWHFHPYDCTNVTVSNVTILAPVSGAPNTDGIDPDSCQDVLIENCY 282
Query: 245 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 304
I++G DAI++KSGWD+YGIAYGRP++++ IR V ++S + ++ GSEMSGG++NV VE
Sbjct: 283 ISVGDDAIAVKSGWDQYGIAYGRPSSNILIRNVAVRSLVSAGISIGSEMSGGVANVTVEN 342
Query: 305 IHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPA 364
+ ++DS G+ +T GRGGYIR I + N+ + H DD +D +A P
Sbjct: 343 VRIWDSRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEHADDGYDRNAFPD 402
Query: 365 IDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSS-ES 423
I I+FK+I G + + G P ++ ++S+ I+ + ++CS I G S
Sbjct: 403 ITGISFKEIHGWGVRVPVRAHGSNIIPIKDVTFQDMSVGISYKKKHIFQCSYIEGRVIGS 462
Query: 424 VFPEPCPELE 433
VFP+PC L+
Sbjct: 463 VFPKPCENLD 472
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis]
Length = 494
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 261/406 (64%), Gaps = 2/406 (0%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
+P RP + ++T+FG VGDG TLNT AF+ A+ + KGG QL VP G+W+T F
Sbjct: 66 RPMPKLRPVAFNLTDFGGVGDGVTLNTEAFERAVLAISKLGKKGGGQLNVPPGRWVTAPF 125
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
NLTSH+TLFL + ++ILG ++ +W ++ PLPSYG G E PG RY SLI+G L+DVV+T
Sbjct: 126 NLTSHMTLFLAEDSIILGIEDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLKDVVIT 185
Query: 151 GDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSN 210
G NGTI+GQG WW + + LN++R LV+ + S +++++N+T ++P + +HP C N
Sbjct: 186 GHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDILITNITLRDSPFWTLHPYDCKN 245
Query: 211 VHIQNISVHAPP-ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
V I+N+++ AP E+P T GI PDS +++ IEDC I++G D I++KSGWD+YGIAY RP+
Sbjct: 246 VTIRNVTILAPVLEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAYRRPS 305
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQI 329
T++ IR ++++S + ++ GSEMSGG+SN+ VE + ++ S + +T GRGGY+R I
Sbjct: 306 TNILIRNLVVRSMVSAGISIGSEMSGGVSNITVENLLVWSSRRAVRIKTAPGRGGYVRHI 365
Query: 330 VISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQE 389
+ N+ V + HPD+ +DP A+P + I+F + G + + G +E
Sbjct: 366 TYRNLTFDNVRVGIVIKTDYNEHPDEGYDPKAVPVLRDISFTGVHGQGVRVPVRIHGSEE 425
Query: 390 APFANICLSNISLSINPGSYNSWECSNIHGSS-ESVFPEPCPELEN 434
P N+ ++S+ + + ++C+ + G ++FP PC L+
Sbjct: 426 IPVRNVTFQDMSVGLTYKKKHIFQCAFVQGRVIGTIFPAPCENLDR 471
>gi|356558431|ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 489
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 171/400 (42%), Positives = 254/400 (63%), Gaps = 2/400 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RP +TEFG VGDG TLNT AF+ + + DKGG QL VP G+WLT FNLTSH+
Sbjct: 67 RPVVFCLTEFGGVGDGVTLNTEAFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLTSHM 126
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL + AVIL Q+ +W ++ LPSYG G E PG RY SLI+G L DVV+TG NGTI
Sbjct: 127 TLFLARDAVILAVQDEKYWPLMPALPSYGYGREHPGPRYSSLIHGQNLVDVVITGHNGTI 186
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
+GQG WW + + LN++R LV+ + S N+V+SN+T ++P + +HP C NV ++ +
Sbjct: 187 NGQGQTWWTKYRQKLLNHTRGPLVQILWSSNIVISNITLRDSPFWTLHPYDCKNVTVKKV 246
Query: 217 SVHAP-PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
++ AP +P T GI PDS +++ IEDC I++G DAI++KSGWD+YGI YGRP+ ++ IR
Sbjct: 247 TILAPVSHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIR 306
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
++++S+ + ++ GSEMSGG+SNV VE I +++S + +T GRGGY+RQI +
Sbjct: 307 NLVVRSNVSAGISIGSEMSGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLM 366
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
L N+ V + HP +DP ALP + I+F +I G + + G ++ P N+
Sbjct: 367 LKNVRVGIVIKTDYNEHPGAGYDPRALPILRDISFMNIRGQGVRVPVRIQGSEQIPVRNV 426
Query: 396 CLSNISLSINPGSYNSWECSNIHGSS-ESVFPEPCPELEN 434
++ + I + ++C+ + G + ++FP PC +
Sbjct: 427 TFQDMKVGITYKKKHIFQCAFVQGQAIGTIFPSPCDSFDR 466
>gi|125571200|gb|EAZ12715.1| hypothetical protein OsJ_02632 [Oryza sativa Japonica Group]
Length = 419
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 185/390 (47%), Positives = 252/390 (64%), Gaps = 28/390 (7%)
Query: 53 KTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNP 112
+TL+T AFQ A+ ++ GGA LYVP G WLTG FNLTSH+TLFL +GAVI +Q+
Sbjct: 55 RTLSTAAFQAAVASIERRRAPGGALLYVPPGVWLTGPFNLTSHMTLFLARGAVIRATQDT 114
Query: 113 SHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSL 172
S W +++PLPSYGRG ELPG RY SLI+G L+DVV+TGDNGTIDGQGS WWD + +L
Sbjct: 115 SSWPLIEPLPSYGRGRELPGGRYMSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTL 174
Query: 173 NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVP 232
++RPHL+E ++S +VVVSN+ F ++P +NIHPVYCS+
Sbjct: 175 PFTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYCSS---------------------- 212
Query: 233 DSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSE 292
NVCIEDC I+ G D I++KSGWDEYG+AYGRP++ + IRR+ SS + A GSE
Sbjct: 213 ----NVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRI-TGSSPFAGFAVGSE 267
Query: 293 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSH 352
SGG+ +V E ++ + S GI +T GRGG+IR + +SD L ++ G+ G H
Sbjct: 268 TSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGH 327
Query: 353 PDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSW 412
PDD +D +ALP +D +T K++ G NI AG+ GI + F+ ICLSN+ L+ + W
Sbjct: 328 PDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLN-GGAAVRPW 386
Query: 413 ECSNIHGSSESVFPEPCPELENSSSNSSST 442
+C + G++ V P PC EL ++S S T
Sbjct: 387 KCEAVSGAALDVQPSPCTELTSTSGMSFCT 416
>gi|356499323|ref|XP_003518491.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Glycine max]
Length = 445
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/412 (44%), Positives = 262/412 (63%), Gaps = 6/412 (1%)
Query: 9 LLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLK 68
L L +C + ++GE C + L R ++SITEF VG+ +TLNT F+ A
Sbjct: 36 LALLVCFS-CVSGEGETVSCSNIVALGHRADNISITEFVGVGNERTLNTKTFREA---FS 91
Query: 69 SFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGI 128
+ GG LYVP G +LT +F+LTSH TL+L G +I+ +Q+ S+W ++ PLPSYGRG
Sbjct: 92 TCHXDGGTLLYVPPGVYLTETFHLTSHRTLYLATGTIIMATQDSSNWPLIAPLPSYGRGR 151
Query: 129 ELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENV 188
E P RY S I+G + DVV+TG+NGTIDGQG WW+ + ++L ++RP+LVEF++S ++
Sbjct: 152 ERPAGRYMSFIHGDGVXDVVITGENGTIDGQGDEWWNKWKQRTLQFTRPNLVEFVNSRDI 211
Query: 189 VVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMG 248
++SN+ F ++P +NIHP CSNV ++ +++ AP +SP T GI P SS NVCIED I+ G
Sbjct: 212 IISNVIFKSSPFWNIHPFLCSNVVVRYVTILAPRDSPNTDGIDPHSSSNVCIEDSYISTG 271
Query: 249 HDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY 308
D ++ KSGWDEYGI YGRP++D+ IRRV SS + +A GSE SGG+ NV E I+LY
Sbjct: 272 DDLVAEKSGWDEYGIVYGRPSSDITIRRV-TGSSPFAGIAIGSETSGGVENVLSEHINLY 330
Query: 309 DSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQI 368
+ GI +T GR GYI+ I +S + G+ G HPDD +DP+ALP + +
Sbjct: 331 NMGIGIHIKTNTGRAGYIKNITMSHVYMEEARKGIRISGDVGDHPDDKYDPNALPLVKGV 390
Query: 369 TFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN-SWECSNIHG 419
T K++ G + AG G+ PF +IC +I+L G W+C+++ G
Sbjct: 391 TIKNVWGVKVLQAGLIQGLSSXPFRDICQYDINLHGVTGPRTPPWKCTDVSG 442
>gi|388520257|gb|AFK48190.1| unknown [Lotus japonicus]
Length = 482
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 171/395 (43%), Positives = 258/395 (65%), Gaps = 2/395 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RP + ++T+FG VGDG TLNT+AF+ A+ + +KGG QL VP G WLT FNLTSH+
Sbjct: 60 RPVAFNLTDFGGVGDGVTLNTVAFERAVSAISKLREKGGGQLNVPPGLWLTAPFNLTSHM 119
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL + AVILG Q+ +W ++ LPSYG G E PG RY SLI+G LRDVV+TG NGTI
Sbjct: 120 TLFLAQDAVILGIQDEKYWPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVITGHNGTI 179
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
+GQG WW + + LN++R LV+ + S ++V++N+T ++P + +HP C NV I+N+
Sbjct: 180 NGQGQSWWTKYREKLLNHTRGPLVQIMWSSDIVIANITLRDSPFWTLHPYDCKNVTIKNV 239
Query: 217 SVHAPP-ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
++ AP +P T GI PDS +++ IEDC I++G DAI++KSGWD+YGIAYG+P+ ++ IR
Sbjct: 240 TILAPVYHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGKPSKNIIIR 299
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
++++S+ + ++ GSEMSGG+SNV VE + +++S I +T GRGGY+RQI +
Sbjct: 300 NLVVRSNVSAGISIGSEMSGGVSNVTVENVLVWESRRAIRIKTAPGRGGYMRQITYRNLT 359
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
N+ V N HPD +DP A P + I+F ++ G + + G +E N+
Sbjct: 360 FNNVRVGIVIKTNYNEHPDAGYDPLAFPVLSDISFINVRGQGVRVPVRIEGSKEISVRNV 419
Query: 396 CLSNISLSINPGSYNSWECSNIHGSS-ESVFPEPC 429
++++ I + ++C+ + G ++FP PC
Sbjct: 420 TFQDMNVGITYKKKHIFQCAFVEGRVIGTIFPAPC 454
>gi|226492991|ref|NP_001140630.1| uncharacterized protein LOC100272705 [Zea mays]
gi|194700250|gb|ACF84209.1| unknown [Zea mays]
gi|413924334|gb|AFW64266.1| hypothetical protein ZEAMMB73_686606 [Zea mays]
Length = 495
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 172/394 (43%), Positives = 255/394 (64%), Gaps = 2/394 (0%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+IT+FGAVGDG+ +NT AF+ A+ + + A++GG QL VP G+WLT FNLTSH+TLFL
Sbjct: 78 NITDFGAVGDGRAVNTAAFERAVEAIAALAERGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
+GA ILG + +W ++ LPSYG G E G R+ SLI+G LRDVV+TG NG+I+GQG
Sbjct: 138 EGAEILGITDEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLRDVVITGHNGSINGQGE 197
Query: 162 VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
VWW + LN +RP LV+ + S++++V+N+T N+P +++HP C+NV + N+++ +P
Sbjct: 198 VWWMKHRRRILNNTRPPLVQLMWSKDIIVANITLRNSPFWHLHPYDCTNVTVSNVTIMSP 257
Query: 222 PE-SPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
+P T GI PDS +V IE+C I++G DAI++KSGWD+YGIAYGRP++D+ IR V +
Sbjct: 258 VSGAPNTDGIDPDSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTAR 317
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN 340
S + ++ GSEMSGG++NV VE + +++S G+ +T GRGGYIR I + N+
Sbjct: 318 SLVSAGISIGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVR 377
Query: 341 VAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 400
+ H DD +D A P I I+FK I G + + G P +I ++
Sbjct: 378 AGIVIKVDYNEHADDGYDRTAFPDITSISFKGIHGQGVRVPVRAHGSDVIPIKDISFQDM 437
Query: 401 SLSINPGSYNSWECSNIHGSS-ESVFPEPCPELE 433
S+ I+ + ++CS + G VFP+PC L+
Sbjct: 438 SVGISYKKKHIFQCSYLEGRVIRPVFPKPCENLD 471
>gi|242044796|ref|XP_002460269.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
gi|241923646|gb|EER96790.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
Length = 518
Score = 350 bits (898), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 173/398 (43%), Positives = 254/398 (63%), Gaps = 5/398 (1%)
Query: 38 PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLT 97
P + EFGAVGDG+T+NT AF++AI + A++GG +L VP+G+WLT FNLTSH+
Sbjct: 100 PPVYDLREFGAVGDGRTVNTAAFESAI---AAIAERGGGRLTVPAGRWLTAPFNLTSHMI 156
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
LFL GA ILG Q+ +W ++ PLPSYG G E G RY SLI+G L+DV +TG NGTI+
Sbjct: 157 LFLAAGAEILGIQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKDVTITGHNGTIN 216
Query: 158 GQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNIS 217
GQG WW F + LN++R LV+ + S ++++SN+T ++P + +H C NV I +
Sbjct: 217 GQGQSWWVKFRRKLLNHTRGPLVQLMRSSDIIISNITLRDSPFWTLHTYDCKNVTISETT 276
Query: 218 VHAP-PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+ AP +P T GI PDS +NV I++C I++G D I++KSGWD+YGIAYGRP+ ++ I+
Sbjct: 277 ILAPIAGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANIVIQN 336
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V+++S + V+ GSEMSGG+S+V VE +H++DS G+ +T GRG Y+ IV + L
Sbjct: 337 VVIRSMVSAGVSIGSEMSGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNIVYRNITL 396
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
N+ V + HPD+ FDP A+P I I++ I G + + G E P N+
Sbjct: 397 ENVRVGIVIKTDYNEHPDEGFDPKAVPTIGNISYTSIHGHRVRVPVRIQGSAEIPVKNVT 456
Query: 397 LSNISLSINPGSYNSWECSNIHGSSES-VFPEPCPELE 433
++S+ I ++ ++CS + G VFP PC L+
Sbjct: 457 FHDMSIGIVDKKHHVFQCSFVQGQVIGYVFPVPCKNLD 494
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
Length = 509
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 175/435 (40%), Positives = 267/435 (61%), Gaps = 18/435 (4%)
Query: 18 LINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQ 77
++ G ++ + +P RP ++T+FG VGD T+NT AF+ AI + KGG Q
Sbjct: 52 IVEGLLTFRRAPARPLPRLRPAVYNLTDFGGVGDXVTVNTEAFERAISAISKLGKKGGGQ 111
Query: 78 LYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKS 137
L VP+G WLT FNLTSH+TLFL++ AVILG Q+ +W ++ PLPSYG G E G RY S
Sbjct: 112 LNVPAGNWLTAPFNLTSHMTLFLDQDAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGS 171
Query: 138 LINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLN 197
LI+G L+DVVVTG NGTI+GQG WW + + LN++R LV+ + S ++V+SN+T +
Sbjct: 172 LIHGQNLKDVVVTGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRD 231
Query: 198 APAYNIHPVYCSNVHIQNISVHAPP-ESPYTVG----------------IVPDSSDNVCI 240
+P + +HP C NV I+N+++ AP E+P T G I P+S +++ I
Sbjct: 232 SPFWTLHPYDCKNVTIKNVTILAPIFEAPNTDGIDPGKVTCTLYYFSDCICPNSCEDMVI 291
Query: 241 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 300
EDC I++G D I++KSGWD+YG+AYGRP+ ++ IR ++++S + V+ GSEMSGG+SNV
Sbjct: 292 EDCYISVGDDGIAIKSGWDQYGVAYGRPSVNILIRNLVIRSMVSAGVSIGSEMSGGVSNV 351
Query: 301 QVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
VE + +++S + +T+ GRGGY++ I + N+ V + HPDD FDP
Sbjct: 352 TVENLLVWNSRRAVRIKTSPGRGGYVQHINYRNLTFDNVRVGIVIKTDYNEHPDDGFDPK 411
Query: 361 ALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGS 420
ALP ++ I+F + G + + G +E P + ++S+ I + ++C+ + G
Sbjct: 412 ALPILEDISFTGVHGQGVRVPVRIHGSEEIPVKKVTFRDMSVGITYKKKHIFQCAYVEGR 471
Query: 421 S-ESVFPEPCPELEN 434
+VFP PC L+
Sbjct: 472 VIGTVFPAPCENLDR 486
>gi|414885630|tpg|DAA61644.1| TPA: hypothetical protein ZEAMMB73_326074 [Zea mays]
Length = 516
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 170/398 (42%), Positives = 253/398 (63%), Gaps = 5/398 (1%)
Query: 38 PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLT 97
P + EFGAVGDG+T+NT AF++AI + A++GG +L VP+G+WLT FNLTSH+T
Sbjct: 98 PPVYDLREFGAVGDGRTVNTAAFESAI---AAIAERGGGRLTVPAGRWLTAPFNLTSHMT 154
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
LFL GA ILG Q+ +W ++ PLPSYG G E G RY SLI+G L+ V +TG NGTI+
Sbjct: 155 LFLAAGAEILGIQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKHVTITGHNGTIN 214
Query: 158 GQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNIS 217
GQG WW F + LN++R LV+ + S N+++SN+T ++P + +H C NV I +
Sbjct: 215 GQGQSWWVKFRRKLLNHTRGPLVQLMRSSNIIISNITLRDSPFWTLHTYDCKNVTISETT 274
Query: 218 VHAP-PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+ AP +P T GI PDS +NV I++C I++G D I++KSGWD+YGIAYGRP+ ++ I+
Sbjct: 275 ILAPIAGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANITIQN 334
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V+++S + V+ GSEMSGG+S+V VE +H++DS G+ +T GRG Y+ ++ +
Sbjct: 335 VVIRSMVSAGVSIGSEMSGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNVIYQNITF 394
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
N+ V + HPD+ FDP A+P I I++ I G + + G + P N+
Sbjct: 395 ENVRVGIVIKTDYNEHPDEGFDPKAVPTIGNISYTSIHGHRVRVPVRIQGSAQIPVKNVT 454
Query: 397 LSNISLSINPGSYNSWECSNIHGSSES-VFPEPCPELE 433
++S+ I ++ ++CS + G VFP PC L+
Sbjct: 455 FHDMSIGIVDKKHHVFQCSFVQGQVIGYVFPVPCKNLD 492
>gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336164|gb|EFH66581.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 506
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 172/406 (42%), Positives = 256/406 (63%), Gaps = 3/406 (0%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFA-DKGGAQLYVPSGKWLTGS 89
QP RP + +FG VGDG TLNT AF+ A+ + + GG QL VP G+WLT
Sbjct: 77 QPLPRLRPVVFDLKDFGGVGDGVTLNTEAFERAVISISKLERNSGGGQLNVPPGRWLTAP 136
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
FNLTSH+TLFL + + ILG ++ +W ++ PLPSYG G E PG RY SLI+G L+D+V+
Sbjct: 137 FNLTSHMTLFLAEDSEILGVEDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLKDIVI 196
Query: 150 TGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
TG NGTI+GQG WW + + LNY+R LV+ + S ++V++N+T ++P + +HP C
Sbjct: 197 TGHNGTINGQGQSWWKKYQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCK 256
Query: 210 NVHIQNISVHAPPE-SPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRP 268
NV I+N+++ AP +P T GI PDS +++ IEDC I+ G DAI++KSGWD++GIAYGRP
Sbjct: 257 NVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRP 316
Query: 269 TTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQ 328
+T++ IR ++++S + V+ GSEMSGGISNV +E + +++S GI +T GRGGYIR
Sbjct: 317 STNILIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRN 376
Query: 329 IVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQ 388
I + L N+ V + H DD++D A P + +F I G + + G +
Sbjct: 377 ITYKNLTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSE 436
Query: 389 EAPFANICLSNISLSINPGSYNSWECSNIHGSS-ESVFPEPCPELE 433
+ P N+ ++S+ + + ++CS + G S+FP PC +
Sbjct: 437 QIPVRNVTFRDMSVGLTYKKKHIFQCSFVKGRVFGSIFPRPCENFD 482
>gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
gi|241932756|gb|EES05901.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
Length = 500
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/394 (42%), Positives = 256/394 (64%), Gaps = 2/394 (0%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++T+FGAVGDG+ +NT AF+ A+ + + A++GG QL VP G+WLT FNLTSH+TLFL
Sbjct: 83 NLTDFGAVGDGRAVNTEAFERAVETIAALAERGGGQLNVPPGRWLTAPFNLTSHMTLFLA 142
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
+GA ILG + +W ++ LPSYG G E G R+ SLI+G L+DVV+TG NG+I+GQG
Sbjct: 143 EGAEILGITDEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGHNGSINGQGE 202
Query: 162 VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
VWW + LN +RP LV+ + S++++++N+T N+P +++HP C+NV + N+++ +P
Sbjct: 203 VWWMKHRRRILNNTRPPLVQLMWSKDIIIANITLRNSPFWHLHPYDCTNVTVSNVTILSP 262
Query: 222 PE-SPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
+P T GI PDSS +V IE+C I++G DAI++KSGWD+YGIAYGRP++++ IR V +
Sbjct: 263 VSGAPNTDGIDPDSSQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSNISIRNVNAR 322
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN 340
S + ++ GSEMSGG++NV VE + +++S G+ +T GRGGYIR I + N+
Sbjct: 323 SLVSAGISIGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVR 382
Query: 341 VAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 400
+ H DD +D A P I I+FK I G + + G P +I ++
Sbjct: 383 AGIVIKVDYNEHADDGYDRTAFPDITSISFKGIHGRGVRVPVRAHGSDVIPIRDISFQDM 442
Query: 401 SLSINPGSYNSWECSNIHGS-SESVFPEPCPELE 433
S+ I+ + ++CS + G VFP+PC L+
Sbjct: 443 SVGISYKKKHIFQCSYVEGRVVRPVFPKPCENLD 476
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323096|gb|EFH53517.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 167/400 (41%), Positives = 252/400 (63%), Gaps = 2/400 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RP ++T+FGAVGDG T+NT AF+ AI+ + A KGG QL VP G+WLT FNLTS++
Sbjct: 65 RPVVFNLTDFGAVGDGVTVNTEAFERAIYKISKLATKGGGQLNVPPGRWLTAPFNLTSYM 124
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL + A IL Q+ +W ++ PLPSYG G E G RY S I+G LRDVVVTG+NG+I
Sbjct: 125 TLFLAENAEILALQDEKYWPLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSI 184
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
+GQG WW + + LN++R LV+ + S ++V +N+T ++P + +HP C NV I N+
Sbjct: 185 NGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNM 244
Query: 217 SVHAPP-ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
++ AP E+P T GI PDS +++ IE+ I++G D I++KSGWD+YG YGRP+ ++ IR
Sbjct: 245 TILAPVFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGRPSKNILIR 304
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
++++S + ++ GSEMSGG+SN+ VE I ++ S G+ +T GRGGY+R I +
Sbjct: 305 NLIIRSMVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVT 364
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
L + V + HPD F+P A P ++ I + I G + + G +E P N+
Sbjct: 365 LDELRVGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNV 424
Query: 396 CLSNISLSINPGSYNSWECSNIHGSS-ESVFPEPCPELEN 434
++S+ I + ++C+ + G ++FP PC L+
Sbjct: 425 TFRDMSVGITYKKKHIFQCAYVEGRVIGTIFPAPCENLDR 464
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|7529266|emb|CAB86682.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|15215709|gb|AAK91400.1| AT3g42950/F18P9_110 [Arabidopsis thaliana]
gi|332644239|gb|AEE77760.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 166/400 (41%), Positives = 252/400 (63%), Gaps = 2/400 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RP ++T+FGAVGDG T+NT AF+ AI+ + A KGG QL VP G+WLT FNLTS++
Sbjct: 62 RPVVFNLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYM 121
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL + A IL Q+ +W ++ PLPSYG G E G RY S I+G LRDVVVTG+NG+I
Sbjct: 122 TLFLSENAEILALQDEKYWSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSI 181
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
+GQG WW + + LN++R LV+ + S ++V +N+T ++P + +HP C NV I N+
Sbjct: 182 NGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNM 241
Query: 217 SVHAPP-ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
++ AP E+P T GI PDS +++ IE+ I++G D I++KSGWD+YG YG+P+ ++ IR
Sbjct: 242 TILAPVFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIR 301
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
++++S + ++ GSEMSGG+SN+ VE I ++ S G+ +T GRGGY+R I +
Sbjct: 302 NLIIRSMVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVT 361
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
L + V + HPD F+P A P ++ I + I G + + G +E P N+
Sbjct: 362 LDELRVGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNV 421
Query: 396 CLSNISLSINPGSYNSWECSNIHGSS-ESVFPEPCPELEN 434
++S+ I + ++C+ + G ++FP PC L+
Sbjct: 422 TFRDMSVGITYKKKHIFQCAYVEGRVIGTIFPAPCDNLDR 461
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 165/400 (41%), Positives = 251/400 (62%), Gaps = 2/400 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RP ++T+FGAVGDG T+NT AF+ AI+ + A KGG QL VP G+WLT FNLTS++
Sbjct: 62 RPVVFNLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYM 121
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL + A IL Q+ +W ++ PLPSYG G E G RY S I+G LRDVVVTG+NG+I
Sbjct: 122 TLFLSENAEILALQDEKYWSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSI 181
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
+GQG WW + + LN++R L + + S ++V +N+T ++P + +HP C NV I N+
Sbjct: 182 NGQGQTWWKKYRQKLLNHTRGPLAQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNM 241
Query: 217 SVHAPP-ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
++ AP E+P T GI PDS +++ IE+ I++G D I++KSGWD+YG YG+P+ ++ IR
Sbjct: 242 TILAPVFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIR 301
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
++++S + ++ GSEMSGG+SN+ VE I ++ S G+ +T GRGGY+R I +
Sbjct: 302 NLIIRSMVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVT 361
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
L + V + HPD F+P A P ++ I + I G + + G +E P N+
Sbjct: 362 LDELRVGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNV 421
Query: 396 CLSNISLSINPGSYNSWECSNIHGSS-ESVFPEPCPELEN 434
++S+ I + ++C+ + G ++FP PC L+
Sbjct: 422 TFRDMSVGITYKKKHIFQCAYVEGRVIGTIFPAPCDNLDR 461
>gi|115479361|ref|NP_001063274.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|51091349|dbj|BAD36084.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091399|dbj|BAD36142.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113631507|dbj|BAF25188.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|215768243|dbj|BAH00472.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 526
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/398 (43%), Positives = 249/398 (62%), Gaps = 5/398 (1%)
Query: 38 PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLT 97
P + EFG VGDG+TLNT AF A+ S A++GG +L VP+G+WLT FNLTS +T
Sbjct: 108 PPVYDLREFGGVGDGRTLNTEAFVAAV---ASIAERGGGRLVVPAGRWLTAPFNLTSRMT 164
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
LFL GA ILG Q+ +W ++ PLPSYG G E G RY SLI+G L+DV +TG NGTI+
Sbjct: 165 LFLAAGAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTIN 224
Query: 158 GQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNIS 217
GQG WW F + LN++R LV+ + S N+ +SN+T ++P + +H C +V I + +
Sbjct: 225 GQGQSWWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTT 284
Query: 218 VHAP-PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+ AP +P T GI PDS +NV I++C I++G D I++KSGWD+YGIAYGRP+T++ I
Sbjct: 285 ILAPIVGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHN 344
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V ++S + V+ GSEMSGG+SNV VE +H++DS G+ +T GRG Y+ I + L
Sbjct: 345 VTIRSMVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITL 404
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+I V + HPD+ FDP A+P I+ I++ I G + + G E P N+
Sbjct: 405 EHIRVGIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVT 464
Query: 397 LSNISLSINPGSYNSWECSNIHGSSES-VFPEPCPELE 433
++S+ + + ++CS + G VFP PC L+
Sbjct: 465 FHDMSVGLVDRKNHVFQCSFVQGQVIGYVFPVPCKNLD 502
>gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryza sativa Indica Group]
Length = 545
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/415 (41%), Positives = 259/415 (62%), Gaps = 18/415 (4%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RP + +T+FG VGDG+ +NT AF+ A+ + + A++GG QL VP G+WLT FNLTSH+
Sbjct: 80 RPKAYELTDFGGVGDGRAVNTEAFERAVKAIAALAERGGGQLNVPLGRWLTAPFNLTSHM 139
Query: 97 TLFLEKGAVILG----------------SQNPSHWDVVDPLPSYGRGIELPGRRYKSLIN 140
TLFL +G+ ILG ++ +W ++ LPSYG G E G R+ SLI+
Sbjct: 140 TLFLAEGSEILGIPSFREVQKLVLLSGFDRDERYWPLMPALPSYGYGRERKGPRFGSLIH 199
Query: 141 GYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
G L+DVV+TG NG+I+GQG VWW + LN +RP L++ + S++++V+N+T N+P
Sbjct: 200 GQNLKDVVITGHNGSINGQGEVWWMKHRRRILNNTRPPLLQLMWSKDIIVANITLKNSPF 259
Query: 201 YNIHPVYCSNVHIQNISVHAPPES-PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWD 259
++ HP C+N+ + N+++ AP S P T GI PDS +V IE+C I++G DAI++KSGWD
Sbjct: 260 WHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWD 319
Query: 260 EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTT 319
+YGIAYGRP+ ++ IR V+ +S + ++ GSEMSGGI+NV VE + +++S G+ +T
Sbjct: 320 QYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVTVEDVRIWESRRGLRIKTA 379
Query: 320 KGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNIT 379
GRGGYI I + N+ + H DD +D DA P I I+FK+I G +
Sbjct: 380 IGRGGYIHDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDAFPDITNISFKEIHGRGVR 439
Query: 380 IAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSS-ESVFPEPCPELE 433
+ G + P +I ++S+ I+ + ++CS I G SVFP+PC L+
Sbjct: 440 VPVRAHGSSDIPIKDISFQDMSIGISYKKKHIFQCSFIEGRVIGSVFPKPCENLD 494
>gi|222641659|gb|EEE69791.1| hypothetical protein OsJ_29512 [Oryza sativa Japonica Group]
Length = 426
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/398 (43%), Positives = 249/398 (62%), Gaps = 5/398 (1%)
Query: 38 PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLT 97
P + EFG VGDG+TLNT AF A+ S A++GG +L VP+G+WLT FNLTS +T
Sbjct: 8 PPVYDLREFGGVGDGRTLNTEAFVAAV---ASIAERGGGRLVVPAGRWLTAPFNLTSRMT 64
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
LFL GA ILG Q+ +W ++ PLPSYG G E G RY SLI+G L+DV +TG NGTI+
Sbjct: 65 LFLAAGAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTIN 124
Query: 158 GQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNIS 217
GQG WW F + LN++R LV+ + S N+ +SN+T ++P + +H C +V I + +
Sbjct: 125 GQGQSWWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTT 184
Query: 218 VHAP-PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+ AP +P T GI PDS +NV I++C I++G D I++KSGWD+YGIAYGRP+T++ I
Sbjct: 185 ILAPIVGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHN 244
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V ++S + V+ GSEMSGG+SNV VE +H++DS G+ +T GRG Y+ I + L
Sbjct: 245 VTIRSMVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITL 304
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+I V + HPD+ FDP A+P I+ I++ I G + + G E P N+
Sbjct: 305 EHIRVGIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVT 364
Query: 397 LSNISLSINPGSYNSWECSNIHGSSES-VFPEPCPELE 433
++S+ + + ++CS + G VFP PC L+
Sbjct: 365 FHDMSVGLVDRKNHVFQCSFVQGQVIGYVFPVPCKNLD 402
>gi|326532444|dbj|BAK05151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/398 (43%), Positives = 253/398 (63%), Gaps = 5/398 (1%)
Query: 38 PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLT 97
P + EFG VGDG+TLNT AF+ A+ + +++GG +L VP+G+WLT FNLTSH+T
Sbjct: 112 PPVYDLREFGGVGDGRTLNTAAFEAAVAAI---SERGGGRLTVPAGRWLTAPFNLTSHMT 168
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
LFL GA ILG Q+ +W ++ PLPSYG G E G RY SLI+G L+DV++TG NGTI+
Sbjct: 169 LFLAAGAEILGVQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKDVIITGHNGTIN 228
Query: 158 GQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNIS 217
GQG WW F + LN++R LV+ + S N+++SN+T ++P + +H C NV I +
Sbjct: 229 GQGQSWWIKFRKKLLNHTRGPLVQLMRSSNIIISNITLRDSPFWTLHVYDCKNVTISGTT 288
Query: 218 VHAP-PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+ AP +P T GI PDS +NV IE+C I++G D +++KSGWD+YGIAYGRP+T++ IR
Sbjct: 289 ILAPIVGAPNTDGIDPDSCENVMIENCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRN 348
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V+++S + V+ GSEMSGG+SNV VE +H++ S G+ +T GRG Y+ IV + L
Sbjct: 349 VIIRSMVSAGVSIGSEMSGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITL 408
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
N+ V + HPD+ FDP A+P I++ I G + + G E P N+
Sbjct: 409 ENVRVGIVIKTDYNEHPDELFDPKAVPVGGNISYTSIHGQRVRVPVRIQGSAEIPVRNVT 468
Query: 397 LSNISLSINPGSYNSWECSNIHGSSES-VFPEPCPELE 433
++S+ I ++ ++CS + G VFP PC L+
Sbjct: 469 FHDMSVGILDKKHHVFQCSFVQGQVIGYVFPVPCKNLD 506
>gi|218202213|gb|EEC84640.1| hypothetical protein OsI_31518 [Oryza sativa Indica Group]
Length = 526
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 172/398 (43%), Positives = 249/398 (62%), Gaps = 5/398 (1%)
Query: 38 PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLT 97
P + EFG VGDG+TLNT AF A+ S A++GG +L VP+G+WLT FNLT+ +T
Sbjct: 108 PPVYDLREFGGVGDGRTLNTEAFVAAV---ASIAERGGGRLVVPAGRWLTAPFNLTNRMT 164
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
LFL GA ILG Q+ +W ++ PLPSYG G E G RY SLI+G L+DV +TG NGTI+
Sbjct: 165 LFLAAGAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTIN 224
Query: 158 GQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNIS 217
GQG WW F + LN++R LV+ + S N+ +SN+T ++P + +H C +V I + +
Sbjct: 225 GQGQSWWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTT 284
Query: 218 VHAP-PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+ AP +P T GI PDS +NV I++C I++G D I++KSGWD+YGIAYGRP+T++ I
Sbjct: 285 ILAPIVGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHN 344
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V ++S + V+ GSEMSGG+SNV VE +H++DS G+ +T GRG Y+ I + L
Sbjct: 345 VTIRSMVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITL 404
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+I V + HPD+ FDP A+P I+ I++ I G + + G E P N+
Sbjct: 405 EHIRVGIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVT 464
Query: 397 LSNISLSINPGSYNSWECSNIHGSSES-VFPEPCPELE 433
++S+ + + ++CS + G VFP PC L+
Sbjct: 465 FHDMSVGLVDRRNHVFQCSFVQGQVIGYVFPVPCRNLD 502
>gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191692|gb|AEE29813.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 506
Score = 340 bits (872), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 173/406 (42%), Positives = 255/406 (62%), Gaps = 3/406 (0%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYL-KSFADKGGAQLYVPSGKWLTGS 89
QP RP + +FG VGDG TLNT AF+ A+ + K GG QL VP G+WLT
Sbjct: 77 QPIPRLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAP 136
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
FNLTSH+TLFL + + ILG ++ +W ++ PLPSYG G E PG RY SLI+G L+D+V+
Sbjct: 137 FNLTSHMTLFLAEDSEILGVEDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDIVI 196
Query: 150 TGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
TG NGTI+GQG WW + LNY+R LV+ + S ++V++N+T ++P + +HP C
Sbjct: 197 TGHNGTINGQGQSWWKKHQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCK 256
Query: 210 NVHIQNISVHAPPE-SPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRP 268
NV I+N+++ AP +P T GI PDS +++ IEDC I+ G DAI++KSGWD++GIAYGRP
Sbjct: 257 NVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRP 316
Query: 269 TTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQ 328
+T++ IR ++++S + V+ GSEMSGGISNV +E + +++S GI +T GRGGYIR
Sbjct: 317 STNILIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRN 376
Query: 329 IVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQ 388
I + L N+ V + H DD++D A P + +F I G + + G +
Sbjct: 377 ITYKNLTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSE 436
Query: 389 EAPFANICLSNISLSINPGSYNSWECSNIHGSS-ESVFPEPCPELE 433
+ P N+ ++S+ + + ++CS + G S+FP PC +
Sbjct: 437 QIPVRNVTFRDMSVGLTYKKKHIFQCSFVKGRVFGSIFPRPCENFD 482
>gi|224034791|gb|ACN36471.1| unknown [Zea mays]
Length = 347
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 164/348 (47%), Positives = 227/348 (65%), Gaps = 2/348 (0%)
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
+TLFL +GAV+ +Q+ W +V+PLPSYGRG ELPG RY S I+G LRDVV+TGD G
Sbjct: 1 MTLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGDRGV 60
Query: 156 IDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
IDGQG VWW+ + ++L ++RP+LVEF+ S + +SN+ N+P +NIHPVYC NV + N
Sbjct: 61 IDGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTN 120
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
+ + AP +SP T G+ PDSS NVCIED I+ G D +++KSGWDEYGIAYGRP+ V +R
Sbjct: 121 MMILAPRDSPNTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVR 180
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
RV SS S +A GSE SGG+ +V VE ++DS GI +T GRGGYIR + +
Sbjct: 181 RV-RGSSPFSGIAIGSEASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVR 239
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
L + G+ G HPD F A+P +D + ++ G N+ G+ GI+ +PF I
Sbjct: 240 LTGVRSGVRIAGDVGDHPDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRI 299
Query: 396 CLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
CLSN+ L S +W+C ++ G++ V P PC EL S +++ S+C
Sbjct: 300 CLSNVKL-FGWRSDAAWKCRDVRGAALGVQPSPCAELATSFASARSSC 346
>gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana]
gi|23197646|gb|AAN15350.1| unknown protein [Arabidopsis thaliana]
Length = 506
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 172/406 (42%), Positives = 254/406 (62%), Gaps = 3/406 (0%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYL-KSFADKGGAQLYVPSGKWLTGS 89
QP RP + +FG VGDG TLNT AF+ A+ + K GG QL VP G+WLT
Sbjct: 77 QPIPRLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAP 136
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
F LTSH+TLFL + + ILG ++ +W ++ PLPSYG G E PG RY SLI+G L+D+V+
Sbjct: 137 FYLTSHMTLFLAEDSEILGVEDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDIVI 196
Query: 150 TGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
TG NGTI+GQG WW + LNY+R LV+ + S ++V++N+T ++P + +HP C
Sbjct: 197 TGHNGTINGQGQSWWKKHQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCK 256
Query: 210 NVHIQNISVHAPPE-SPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRP 268
NV I+N+++ AP +P T GI PDS +++ IEDC I+ G DAI++KSGWD++GIAYGRP
Sbjct: 257 NVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRP 316
Query: 269 TTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQ 328
+T++ IR ++++S + V+ GSEMSGGISNV +E + +++S GI +T GRGGYIR
Sbjct: 317 STNILIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRN 376
Query: 329 IVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQ 388
I + L N+ V + H DD++D A P + +F I G + + G +
Sbjct: 377 ITYKNLTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSE 436
Query: 389 EAPFANICLSNISLSINPGSYNSWECSNIHGSS-ESVFPEPCPELE 433
+ P N+ ++S+ + + ++CS + G S+FP PC +
Sbjct: 437 QIPVRNVTFRDMSVGLTYKKKHIFQCSFVKGRVFGSIFPRPCENFD 482
>gi|357158595|ref|XP_003578178.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 532
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/398 (42%), Positives = 251/398 (63%), Gaps = 5/398 (1%)
Query: 38 PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLT 97
P + EFG +GDG+TLNT AF+ A+ + +++GG +L VP+G+WLT FNLTS +T
Sbjct: 114 PPVYDLREFGGIGDGRTLNTAAFEAAVAAI---SERGGGRLTVPAGRWLTAPFNLTSGMT 170
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
LFL GA ILG Q+ +W ++ PLPSYG G E G RY SLI+G L+DV VTG NGTI+
Sbjct: 171 LFLASGAEILGIQDERYWPLMPPLPSYGYGREHKGPRYGSLIHGQDLKDVTVTGHNGTIN 230
Query: 158 GQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNIS 217
GQG WW F + LN++R LV+ + S N+++SN+T ++P + +H C NV I +
Sbjct: 231 GQGKSWWTKFRRKLLNHTRGPLVQLMRSSNIIISNITLQDSPFWTLHTYDCKNVTISETT 290
Query: 218 VHAP-PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+ AP +P T GI PDS +NV I++C I++G D +++KSGWD+YGIAYGRP+T++ IR
Sbjct: 291 ILAPIVGAPNTDGIDPDSCENVMIQNCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRD 350
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
V ++S + V+ GSEMSGG+SNV VE +H++ S G+ +T GRG Y+ IV + L
Sbjct: 351 VTIRSMVSAGVSIGSEMSGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITL 410
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
N+ V + HPD+ F+P A+P + I++ I G + + G E P N+
Sbjct: 411 ENVRVGIVIKTDYNEHPDEGFNPKAVPIVGNISYTSIHGQGVRVPVRIQGSAEIPVKNVT 470
Query: 397 LSNISLSINPGSYNSWECSNIHGSSES-VFPEPCPELE 433
++S+ I ++ ++CS + G VFP PC L+
Sbjct: 471 FHDMSVGILDKKHHVFQCSYVQGQVIGYVFPVPCKNLD 508
>gi|255545182|ref|XP_002513652.1| Exopolygalacturonase precursor, putative [Ricinus communis]
gi|223547560|gb|EEF49055.1| Exopolygalacturonase precursor, putative [Ricinus communis]
Length = 452
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 170/394 (43%), Positives = 234/394 (59%), Gaps = 32/394 (8%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R H+ +T+FG VGDGKTLNT AFQ AI L +AD GGA+L VP+GKWLTGSFNLTSH
Sbjct: 54 RKHTAFLTDFGGVGDGKTLNTKAFQAAIANLSQYADDGGAELIVPAGKWLTGSFNLTSHF 113
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL +GA IL SQN + + ++ LPS+G + P R+ SLI G L DVV+TG+NGTI
Sbjct: 114 TLFLHRGATILASQNEADFPIIAALPSFGVEKDFPDGRFSSLIRGINLTDVVITGNNGTI 173
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG+ WWD F SRP L++ + ++ + +SN+T +N+P++++HPVYCSNV +Q +
Sbjct: 174 DGQGAPWWDKFEKGLFKASRPLLIDIMYTDQLQISNITLVNSPSWHVHPVYCSNVLVQGV 233
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP E P T GI P L S + +Y
Sbjct: 234 TIIAPVEVPNTDGINPSR------------------FLASSFHQY-------------LN 262
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
L S+S + +A GSEMSGGI NV+VE I + S + + +T GRGGY++ I + L
Sbjct: 263 FPLISTSDAGIALGSEMSGGIENVRVEDITAFTSQSAVRIKTAPGRGGYVKDIFVRRMTL 322
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ F GN +HPDD FDP+AL I I ++DI+ N+ ++G F G F IC
Sbjct: 323 QTMKYVFWISGNYKTHPDDGFDPNALAEIKNINYRDIVARNVNMSGAFDGFPTNHFTGIC 382
Query: 397 LSNISLSINPGSYN-SWECSNIHGSSESVFPEPC 429
+SN+++ ++ W CSN+ G S V P PC
Sbjct: 383 MSNVTIQLSQTPKKPQWNCSNVEGVSSHVTPTPC 416
>gi|8954055|gb|AAF82228.1|AC069143_4 Contains similarity to a polygalacturonase-like protein gi|7529266
from Arabidopsis thaliana BAC F18P9 gb|AL138654 and
contains multiple polygalacturonase (pectinase) PF|00295
domains [Arabidopsis thaliana]
Length = 533
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/433 (40%), Positives = 255/433 (58%), Gaps = 30/433 (6%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYL-KSFADKGGAQLYVPSGKWLTGS 89
QP RP + +FG VGDG TLNT AF+ A+ + K GG QL VP G+WLT
Sbjct: 77 QPIPRLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAP 136
Query: 90 FNLTSHLTLFLEKGAVILG---------------------------SQNPSHWDVVDPLP 122
FNLTSH+TLFL + + ILG Q+ +W ++ PLP
Sbjct: 137 FNLTSHMTLFLAEDSEILGVEEHNLGDFETLRDGCVRLVYLTCHFNCQDEKYWPLMPPLP 196
Query: 123 SYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEF 182
SYG G E PG RY SLI+G L+D+V+TG NGTI+GQG WW + LNY+R LV+
Sbjct: 197 SYGYGRERPGPRYGSLIHGQNLKDIVITGHNGTINGQGQSWWKKHQRRLLNYTRGPLVQI 256
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPE-SPYTVGIVPDSSDNVCIE 241
+ S ++V++N+T ++P + +HP C NV I+N+++ AP +P T GI PDS +++ IE
Sbjct: 257 MWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIE 316
Query: 242 DCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQ 301
DC I+ G DAI++KSGWD++GIAYGRP+T++ IR ++++S + V+ GSEMSGGISNV
Sbjct: 317 DCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEMSGGISNVT 376
Query: 302 VEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDA 361
+E + +++S GI +T GRGGYIR I + L N+ V + H DD++D A
Sbjct: 377 IENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHADDNYDRKA 436
Query: 362 LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSS 421
P + +F I G + + G ++ P N+ ++S+ + + ++CS + G
Sbjct: 437 YPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDMSVGLTYKKKHIFQCSFVKGRV 496
Query: 422 -ESVFPEPCPELE 433
S+FP PC +
Sbjct: 497 FGSIFPRPCENFD 509
>gi|224151097|ref|XP_002337059.1| predicted protein [Populus trichocarpa]
gi|222837934|gb|EEE76299.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 149/331 (45%), Positives = 213/331 (64%), Gaps = 1/331 (0%)
Query: 114 HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLN 173
+ +++PLPSYGRG + G R+ SLI G L DVV+TG NGTIDGQG +WW F + LN
Sbjct: 3 EYPLIEPLPSYGRGRDADGARFSSLIFGNNLTDVVITGANGTIDGQGELWWTKFRAGELN 62
Query: 174 YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPD 233
++RP+L+E + S N+ +SNLT +N+P++N+HPVYCSNV +Q +++ AP SP T GI PD
Sbjct: 63 HTRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPD 122
Query: 234 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 293
S N I+DC I G D +++KSGWDEYGIA+G PT V IRR+ S + + +A GSEM
Sbjct: 123 SCTNTKIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSEM 182
Query: 294 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHP 353
SGGI +V+ E I DS +G+ +T GRGGY++ I + L + F GN GSHP
Sbjct: 183 SGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHP 242
Query: 354 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN-SW 412
D+++DP+A+P I I ++D++ N+T+A GI PF IC+SN+++ + W
Sbjct: 243 DNNYDPNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISNVTIGLARNRKKLQW 302
Query: 413 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
CS++ G + V P+PC L + C
Sbjct: 303 NCSDVAGITSEVTPKPCDLLSDQGPGKIGAC 333
>gi|302143796|emb|CBI22657.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 164/333 (49%), Positives = 228/333 (68%), Gaps = 11/333 (3%)
Query: 2 KMPVALLLLLALCSAILINGEVSDGQCDDQPTLDP--------RPHSVSITEFGAVGDGK 53
+ P AL ++LA+ L++ V+ +C ++P R HS +T+FGA GDGK
Sbjct: 8 RKPHALGIVLAVLILGLLSFRVA--ECQTSSFMEPIKYKALRCRKHSAVLTDFGATGDGK 65
Query: 54 TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPS 113
T+NT AF++AI +L FAD GGA+L VP GKWLTGSFNLTSH TL+++K AVILG+Q+ S
Sbjct: 66 TINTKAFKSAIDHLSQFADDGGAELIVPPGKWLTGSFNLTSHFTLYIDKDAVILGAQDES 125
Query: 114 HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLN 173
+ +++ LPSYG G + G R+ SLI G L DVV+TG NGT++GQG WWD F ++ N
Sbjct: 126 AYPLIEVLPSYGVGRD-GGGRHSSLIFGTNLTDVVITGGNGTLNGQGKYWWDKFRAKKYN 184
Query: 174 YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPD 233
+RP+L+E + S +V +SNLT +++P++N+HPVY NV ++++++ AP +SP T GI PD
Sbjct: 185 DTRPYLIEIMYSNHVQISNLTLIDSPSWNVHPVYSRNVLVKDLTILAPIDSPNTDGINPD 244
Query: 234 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 293
S V IEDC I G D I++KSGWD+YG +G PT D+ IRR+ S +++A GSEM
Sbjct: 245 SCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDSATIALGSEM 304
Query: 294 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
SGGI NV E I D+ +GI +T GRGGYI
Sbjct: 305 SGGIKNVWAEDITAIDTQSGIRIKTGIGRGGYI 337
>gi|109509138|gb|ABG34278.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 307
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 152/290 (52%), Positives = 210/290 (72%), Gaps = 4/290 (1%)
Query: 160 GSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVH 219
GS+WW+ F +++L+Y+RPHLVE ++S VV+SNLTFLN+P + IHP+YCS+V +QN+++
Sbjct: 1 GSMWWERFRNKTLDYTRPHLVELMNSTGVVISNLTFLNSPFWTIHPIYCSHVIVQNVTIR 60
Query: 220 APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLL 279
AP +SP T GI PDSSD+VCIEDC I+ G D I++KSGWDEYGI+YGRP+ ++ IRR++
Sbjct: 61 APLDSPNTDGIDPDSSDDVCIEDCYISTGDDVIAIKSGWDEYGISYGRPSKNIIIRRLIG 120
Query: 280 QSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI 339
++ S S +A GSEMSGG+S+V E I ++S GI +T+ GRGGY+R I IS+ L N+
Sbjct: 121 ETHS-SGIAIGSEMSGGVSDVHAEDIVFFNSTTGIRIKTSPGRGGYVRNIFISNVSLANV 179
Query: 340 NVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
VA G G HPD+ +DP A+P I++ITFKDI G NIT+AG GI+ F NICL N
Sbjct: 180 KVAIRFTGRYGEHPDESYDPKAMPKIERITFKDIHGENITVAGLMEGIEGDNFINICLYN 239
Query: 400 ISLSINPGSYNSWECSNIHGSSESVFPEPCPELENS-SSNSSSTCFSLIR 448
I+LS+N S + W CSN+ G S VFP+ C LE S + + C+ L++
Sbjct: 240 ITLSVN--SISPWNCSNVQGFSSLVFPQTCELLEESIFPDHCTECYHLLQ 287
>gi|359477236|ref|XP_003631950.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 275
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 147/201 (73%), Positives = 173/201 (86%)
Query: 230 IVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAF 289
++ DSSD+ CIEDC IAMGHDAI+LKSGWDEYGIAYGRPTT+VHIRRV LQSSSGSS+AF
Sbjct: 48 LISDSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAF 107
Query: 290 GSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNC 349
GSEMSGGISNV VE++HLY+S +GIEFRTTKGRGGYI++I+ISD + NI+ AF A G
Sbjct: 108 GSEMSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQI 167
Query: 350 GSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSY 409
GSHPDD FDP+ALP +D IT +++IGTNITIAG+FTGIQE+PF +ICLSNISLS P +
Sbjct: 168 GSHPDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLSTTPPAS 227
Query: 410 NSWECSNIHGSSESVFPEPCP 430
SW CSN+ G S+ VFPEPCP
Sbjct: 228 ISWVCSNVSGFSQWVFPEPCP 248
>gi|326501406|dbj|BAK02492.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 139/319 (43%), Positives = 211/319 (66%), Gaps = 1/319 (0%)
Query: 115 WDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNY 174
W ++ PLPSYGRG + PG RY + I G L DV+++G+NGTI+GQG VWWD F ++ L+Y
Sbjct: 34 WPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIISGNNGTINGQGQVWWDKFHAKELDY 93
Query: 175 SRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDS 234
+R +L+E + S ++++SN+TF++AP++N+HP YC+NV I +++ AP SP T GI PDS
Sbjct: 94 TRGYLLELLYSRDIIISNVTFVDAPSWNLHPTYCTNVTISGVTILAPVHSPNTDGIDPDS 153
Query: 235 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 294
S +V IEDC I G D I++KSGWDEYGI + P+ + +RR+ S + + +A GSEMS
Sbjct: 154 SSHVKIEDCYIVSGDDCIAVKSGWDEYGIRFNMPSQHIVVRRLTCISPTSAMIALGSEMS 213
Query: 295 GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPD 354
GGI +V+VE ++ + + ++ GRGG++R + + L+ + F GN G HPD
Sbjct: 214 GGIQDVRVEDNIAINTESAVRIKSGVGRGGFVRDVFVRRLSLHTMKWVFWMTGNYGQHPD 273
Query: 355 DDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN-SWE 413
+ DP ALP + I ++D+ N+T+AG GI P+ IC+SN++ + P + W
Sbjct: 274 NSSDPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQLAPKAKKLQWN 333
Query: 414 CSNIHGSSESVFPEPCPEL 432
C+++ G + V PEPCPEL
Sbjct: 334 CTDVQGVAYGVSPEPCPEL 352
>gi|320166922|gb|EFW43821.1| polygalacturonase [Capsaspora owczarzaki ATCC 30864]
Length = 448
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/401 (41%), Positives = 245/401 (61%), Gaps = 10/401 (2%)
Query: 33 TLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNL 92
TL R S +I ++GAVGD T+NT F N I L A G ++Y+P G +++G+FNL
Sbjct: 48 TLPVRSKSFNIVDYGAVGDNVTVNTAVF-NKIVAL--VAANGDGEIYIPPGIFVSGTFNL 104
Query: 93 TSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPG-RRYKSLINGYMLRDVVVTG 151
TSH+TL L GAV+ GS N + +++ LPSYGRG E RY SL++G L DVV+T
Sbjct: 105 TSHVTLRLASGAVLAGSPNFADHEIIPALPSYGRGRETESIFRYSSLVHGENLDDVVITS 164
Query: 152 DNG--TIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
DNG IDG G WW + +L Y+R HLVE + + ++++ N+ N+P + IHP +
Sbjct: 165 DNGQGVIDGNGMGWWAAHRASNLTYTRGHLVELMYTTDIMLVNVELRNSPFWTIHPYSST 224
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
NV + N++++ P +SP T G PDS + V I++C+ +G D I++KSGWD GI YG PT
Sbjct: 225 NVLVSNVTINNPLDSPNTDGCDPDSCNQVVIQNCVFTVGDDCIAVKSGWDNPGIQYGVPT 284
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQI 329
TDV IR + + + + +++A GSEMSGG+SN+ + I ++ +GI ++ +GRGGY+R +
Sbjct: 285 TDVVIRNMTMHTPTSAAIAIGSEMSGGVSNLLAQDIRAFNCSSGIRLKSARGRGGYLRNL 344
Query: 330 VISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQE 389
L ++ A G H +DP A+P ID I +I+GT ITI G+F G+ +
Sbjct: 345 TFDGVTLNDVKTALSINDFYGQHESIFYDPLAVPIIDSIFMSNIVGTAITIPGDFQGLFD 404
Query: 390 APFANICLSNISLS-INPGSYNSWECSNIHGSSESVFPEPC 429
A N+ +SN+SL+ + GSY CS G+ +V P C
Sbjct: 405 AKITNVAISNVSLAVVGSGSY---TCSYATGTQHAVVPVLC 442
>gi|359490607|ref|XP_003634121.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Vitis vinifera]
Length = 492
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 171/408 (41%), Positives = 241/408 (59%), Gaps = 10/408 (2%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGS 89
+ P ++ R HS + EFGA GDGKT NT AF++AI +L FAD GGA L VP GKWLTGS
Sbjct: 31 EYPAINCRNHSAVVMEFGAAGDGKTSNTKAFKSAIDHLSKFADVGGAHLIVPPGKWLTGS 90
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
FNLTSH TL++ K A+ILGSQ+ S + +V LPSYG R+ SLI G L DVV+
Sbjct: 91 FNLTSHFTLYIHKDAIILGSQDESDYPIVKALPSYGGT----AGRFSSLILGTNLTDVVI 146
Query: 150 TGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
TG NGT +GQG WWD F + LN +RP+L+E + S V ++ T +++P++N+HP+Y
Sbjct: 147 TGGNGTTNGQGKPWWDKFHEKRLNATRPNLIEIVFSYQVQITX-TLIDSPSWNVHPIYSR 205
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
NV IQ +++ AP P T GI PDS N+ +EDC I G D+I++KS +E G+ G PT
Sbjct: 206 NVIIQGLTIIAPVTVPNTDGINPDSCTNIRVEDCYIVSGDDSIAVKSALNENGVKCGMPT 265
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQI 329
+ IRR+ S + +A G EM+G + NV+ E I D GI +T RGGY++ I
Sbjct: 266 EGLIIRRLTCISPHSAVIALGREMAGXM-NVRAEDITAIDXQFGIRIKTGLERGGYVKDI 324
Query: 330 VISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQE 389
+ + + AF G+ G P + P I+ I ++D++ N+T GI
Sbjct: 325 YVRRMTMKTMRFAFWIIGDYGPPPAPGHEG---PVIEGINYRDMVADNVTYPAQLHGISG 381
Query: 390 APFANICLSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPELENSS 436
PF C+SN+++ + S W+C + G + V P+PC L S
Sbjct: 382 GPFTGFCISNVTIGLTEESRKQQWDCDEVQGITSRVTPQPCDLLSPSK 429
>gi|219887583|gb|ACL54166.1| unknown [Zea mays]
Length = 463
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 145/276 (52%), Positives = 193/276 (69%), Gaps = 2/276 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGA--QLYVPSGKWLTGSFNLTS 94
R H+ S+ +FG VGDG T NT AF++A+ +L ++ +GG LYVP+GKWLTG FNLTS
Sbjct: 48 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 107
Query: 95 HLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
H TL+L + AVILGSQ+ W +VDPLPSYGRG + G R+ SLI G L DVV+TG NG
Sbjct: 108 HFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITGSNG 167
Query: 155 TIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
TIDGQG++WW F L Y+R +L+E + S+ + +SNLT LN+PA+NIHPVY SN+ +Q
Sbjct: 168 TIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQ 227
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
I++ AP SP T GI PDS +V IEDC I G D +++KSGWDEYGI+YG P+ + I
Sbjct: 228 GITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVI 287
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
RR+ S + + +A GSEMSGG + H +++
Sbjct: 288 RRLTCVSPTSAVIALGSEMSGGGVRAAPDDAHHHEA 323
>gi|297597216|ref|NP_001043594.2| Os01g0618900 [Oryza sativa Japonica Group]
gi|54290860|dbj|BAD61521.1| polygalacturonase-like [Oryza sativa Japonica Group]
gi|255673471|dbj|BAF05508.2| Os01g0618900 [Oryza sativa Japonica Group]
Length = 308
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 151/306 (49%), Positives = 209/306 (68%), Gaps = 2/306 (0%)
Query: 137 SLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFL 196
SLI+G L+DVV+TGDNGTIDGQGS WWD + +L ++RPHL+E ++S +VVVSN+ F
Sbjct: 2 SLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLPFTRPHLLELMNSSDVVVSNVVFQ 61
Query: 197 NAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKS 256
++P +NIHPVYCSNV I+N++V AP +SP T GI PDSS NVCIEDC I+ G D I++KS
Sbjct: 62 DSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKS 121
Query: 257 GWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEF 316
GWDEYG+AYGRP++ + IRR+ SS + A GSE SGG+ +V E ++ + S GI
Sbjct: 122 GWDEYGMAYGRPSSHITIRRI-TGSSPFAGFAVGSETSGGVEHVLAEHLNFFSSGFGIHI 180
Query: 317 RTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGT 376
+T GRGG+IR + +SD L ++ G+ G HPDD +D +ALP +D +T K++ G
Sbjct: 181 KTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQGQ 240
Query: 377 NITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSS 436
NI AG+ GI + F+ ICLSN+ L+ + W+C + G++ V P PC EL ++S
Sbjct: 241 NIREAGSIKGIATSAFSRICLSNVKLN-GGAAVRPWKCEAVSGAALDVQPSPCTELTSTS 299
Query: 437 SNSSST 442
S T
Sbjct: 300 GMSFCT 305
>gi|357479389|ref|XP_003609980.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355511035|gb|AES92177.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 563
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 137/349 (39%), Positives = 218/349 (62%), Gaps = 2/349 (0%)
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
L + + + + +W ++ PLPSYG G E PG RY SLI+G L+DVV+TG NGTI+GQ
Sbjct: 204 LWRCLIHIADPDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDVVITGHNGTINGQ 263
Query: 160 GSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVH 219
G WW F + LNY+R L++ + S ++V++++T ++P + +HP C N+ I+ +++
Sbjct: 264 GQAWWKKFRQKRLNYTRGPLLQIMWSSDIVITDITLRDSPFWTLHPYDCKNLTIKGVTIL 323
Query: 220 APP-ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVL 278
AP E+P T GI PDS +++ IEDC I++G DAI++KSGWD+YGIAYGRP+ ++ IR ++
Sbjct: 324 APVFEAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLV 383
Query: 279 LQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYN 338
++S + ++ GSEMSGGISNV VE + ++DS G+ +T GRGGY+RQI + N
Sbjct: 384 VRSMVSAGISIGSEMSGGISNVTVENLLVWDSRRGVRIKTAPGRGGYVRQITYRNITFEN 443
Query: 339 INVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLS 398
+ V + HPDD +DP ALP I I+F ++ G + + G +E P N+
Sbjct: 444 VRVGIVMKTDYNEHPDDGYDPTALPVIRDISFTNVYGHGVRVPVRIHGSEEIPVRNVTFR 503
Query: 399 NISLSINPGSYNSWECSNIHGSS-ESVFPEPCPELENSSSNSSSTCFSL 446
++S+ + + ++C+ +HG ++FP PC L+ + S+
Sbjct: 504 DMSVGLTYKKKHIFQCAFVHGRVIGTIFPSPCENLDRYNEQGQLVKHSM 552
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 65/103 (63%)
Query: 6 ALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIF 65
A L + +++ G + G+ +P + RP ++T+FG VGDG TLNT AF+ A+
Sbjct: 39 AFLSVFIWQRNMVVGGFMVFGRVPVRPIPNMRPVVFNLTDFGGVGDGVTLNTEAFERAVS 98
Query: 66 YLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILG 108
+ F KGGAQL VP G+WLT FNLTSH+TLFL + AVIL
Sbjct: 99 AISKFGKKGGAQLNVPPGRWLTAPFNLTSHITLFLAQDAVILA 141
>gi|297745346|emb|CBI40426.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 140/252 (55%), Positives = 176/252 (69%), Gaps = 5/252 (1%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R HS S+ +FG VGDG+TLNT AFQ+A+ L + +GGAQLYVP+GKWLTGSF+LTSH
Sbjct: 45 RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHF 104
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL + AV+L SQ+ S W V+ PLPSYGRG + RY SLI G L DV++TGDNGTI
Sbjct: 105 TLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTI 164
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
DGQG +WW F L Y+RP+L+E + S ++ +SNLT LN+P++N+HPVY N+ IQ I
Sbjct: 165 DGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGI 224
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ AP SP T GI PDS N IEDC I G D +++KSGWDEYGIAY D H R
Sbjct: 225 TILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAY-----DWHRER 279
Query: 277 VLLQSSSGSSVA 288
L + S+A
Sbjct: 280 RLYMVAENVSMA 291
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 373 IIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPE 431
++ N+++A GI PF IC+SN+++ + + W C+++ G S V P PC
Sbjct: 283 MVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCST 342
Query: 432 LENSSSNSSSTC 443
L + +S C
Sbjct: 343 LPDQGPEKTSLC 354
>gi|297816102|ref|XP_002875934.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
gi|297321772|gb|EFH52193.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
Length = 443
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 158/405 (39%), Positives = 223/405 (55%), Gaps = 40/405 (9%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGS 89
+ L+ R S +T+FGA+GDGKT NT AF+ AI L S A GG+QL VP GKWLTGS
Sbjct: 44 EHAALNCRRQSAILTDFGAIGDGKTSNTKAFREAIRNLTSRAGDGGSQLIVPKGKWLTGS 103
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
FNLTSH TL +++GA IL SQ+ S + ++ LPSY R+ SLI G L DVV+
Sbjct: 104 FNLTSHFTLHIKEGATILASQDESEYPMLQVLPSYR------DTRFASLIYGSNLTDVVI 157
Query: 150 TGDNGTIDGQGSVWWDWFSSQSLN-YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
GD GTI+GQG WW + + RP L+E SSENV +SN+ +++P ++IHPVYC
Sbjct: 158 AGDKGTINGQGKSWWAKYRNGGFKSIQRPMLIEIQSSENVQISNINLIDSPMWSIHPVYC 217
Query: 209 SNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRP 268
NV I+ + + P +S T GI P GRP
Sbjct: 218 RNVIIKGVKISNPIDSANTDGINP--------------------------------VGRP 245
Query: 269 TTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQ 328
+ IRR + +G+ +A GSEMSGGI V++E + L+++ + I+ T GRGGY++
Sbjct: 246 IEMLLIRRFSCIAPNGAGIAMGSEMSGGIKGVRMEDVTLHNTQSAIKIETAMGRGGYVQN 305
Query: 329 IVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQ 388
+ + F G+ P D P A P + I F+DI G N++ + G++
Sbjct: 306 VWARRFTIKTSKYVFLMTGSHKPIPRDGNIPKAKPVVTNINFRDITGENVSTSAKLEGMK 365
Query: 389 EAPFANICLSNISLSINP-GSYNSWECSNIHGSSESVFPEPCPEL 432
PF +C+SN+S+S++P S + C +I G S SV P+PC L
Sbjct: 366 SNPFTGVCMSNVSISLSPNASKQQFHCMDIVGESRSVKPQPCSLL 410
>gi|91806548|gb|ABE66001.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
Length = 416
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 167/416 (40%), Positives = 232/416 (55%), Gaps = 70/416 (16%)
Query: 34 LDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLT 93
L+ R HS +T+FGAVGDGKT NT AF+NAI L A GGAQL VP GKWLTGSFNLT
Sbjct: 38 LNCRKHSAILTDFGAVGDGKTSNTKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSFNLT 97
Query: 94 SHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR-RYKSLINGYMLRDVVVTGD 152
SH TLF+++GA IL SQ+ S W V+ PLPSYG+G + G R+ SLI+G L DVV+TG+
Sbjct: 98 SHFTLFIQRGATILASQDESEWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGN 157
Query: 153 NGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVH 212
NGTI+GQG WWD F + +RP+L+E + S+N+ +SN+T +++P++NIHPVYC++V
Sbjct: 158 NGTINGQGQYWWDKFKKKQFKITRPYLIEILFSKNIQISNITLIDSPSWNIHPVYCNSVI 217
Query: 213 IQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGI--AYGRP-- 268
+++++V AP P T GI PDS N IEDC I G D I++KSGWD+YGI A GR
Sbjct: 218 VKSVTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKTAVGRGAY 277
Query: 269 TTDVHIRRVLLQSSS---GSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGY 325
D++ RR+ +++ S +GS G + +I I +R
Sbjct: 278 VKDIYARRITMKTMKYVFWMSGNYGSHPDEGFDPKALPEI------TNINYR-------- 323
Query: 326 IRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFT 385
++ NV A +L ID+ F I +N+TIA
Sbjct: 324 ---------DMTAENVTMSA---------------SLDGIDKDPFTGICISNVTIA---- 355
Query: 386 GIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPC---PELENSSSN 438
L+ + + W C+++ G + V PEPC PE + + N
Sbjct: 356 -----------LAAKAKKMQ------WNCTDVAGVTSRVTPEPCSLLPEKKAQAKN 394
>gi|255641037|gb|ACU20798.1| unknown [Glycine max]
Length = 186
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 128/186 (68%), Positives = 160/186 (86%)
Query: 118 VDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRP 177
+DPLPSYGRGI++P RY+SLI G L DVV+TGDNG IDGQGSVWWD S+ SLNYSRP
Sbjct: 1 MDPLPSYGRGIDVPVGRYRSLIYGQNLSDVVITGDNGIIDGQGSVWWDLISTHSLNYSRP 60
Query: 178 HLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDN 237
H++E + S+N+++SNLTFLN+PA++IHPVYCSN+ IQ I+V AP + PYT GIVPDSS++
Sbjct: 61 HIIELVGSDNIIISNLTFLNSPAWSIHPVYCSNIQIQKITVQAPTKFPYTSGIVPDSSEH 120
Query: 238 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 297
VCI++C I+ GHDAI LKSGWDEYG+AYG+PT++VHIR V LQSSSG+ +AFGSEMSGGI
Sbjct: 121 VCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAFGSEMSGGI 180
Query: 298 SNVQVE 303
S++ E
Sbjct: 181 SDIIAE 186
>gi|449532729|ref|XP_004173333.1| PREDICTED: probable polygalacturonase-like, partial [Cucumis
sativus]
Length = 332
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/299 (44%), Positives = 200/299 (66%), Gaps = 3/299 (1%)
Query: 147 VVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
VV +G+NGTIDGQG +WW+ + +++LN++R HLVE I+S N+++SNLTF N+P + IHPV
Sbjct: 36 VVFSGENGTIDGQGKMWWELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPV 95
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
YCSNV I+++++ AP +P T GI PDSS NVCIEDC I G D +++KSGWD+YGI
Sbjct: 96 YCSNVVIKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLA 155
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
RP++++ IRRV + + S V GSEMSGGISN+ +E ++++DS GI ++ +GRGGYI
Sbjct: 156 RPSSNIVIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYI 215
Query: 327 RQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTG 386
+ I++ + + +A HPD+ FDP A+P + I +++ N T A G
Sbjct: 216 ANVSITNFVMNRVKMAIRFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYG 275
Query: 387 IQEAPFANICLSNIS-LSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTCF 444
I + +C+ N++ L + P + W C+ + G S SVFP PCP+L+N++ +S + F
Sbjct: 276 IAGTSYDGVCMKNVTILGLTPSA--KWHCAFVSGFSTSVFPTPCPQLQNTTFSSLCSSF 332
>gi|4490311|emb|CAB38802.1| putative protein [Arabidopsis thaliana]
gi|7270292|emb|CAB80061.1| putative protein [Arabidopsis thaliana]
Length = 462
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/400 (40%), Positives = 233/400 (58%), Gaps = 16/400 (4%)
Query: 35 DPRPHSV--SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNL 92
DP P+ + SIT+FG VGDGKT NT AF+ A+ +L+ FA +GGAQL VP G WL+GSFNL
Sbjct: 64 DPFPNRIVMSITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNL 123
Query: 93 TSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGD 152
TS+ TLFLE+GA+ILGS++ W +++PLPSYGRG E PG R+ SLI+G L +VV+T
Sbjct: 124 TSNFTLFLERGALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVIT-- 181
Query: 153 NGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVH 212
+ SV Q ++ + + +E+ + LN+ I S
Sbjct: 182 --VSVLRFSVMIKEKMGQLMDRGKCG-GSYGGTEHWCIREAILLNSRTLIISSSLTSLCS 238
Query: 213 IQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDV 272
I S ++ + DSS NVCIEDC I G D +++KSGWD+YG+A RP++++
Sbjct: 239 IL--------LSGQSILFIADSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNI 290
Query: 273 HIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVIS 332
IRR+ + + S V GSEMSGGI N+ VE IH++DS G+ +T KGRGGYI I +
Sbjct: 291 VIRRISGTTRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFN 350
Query: 333 DAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPF 392
+ L + V H DD +DP ALP + I +++ N A G++ F
Sbjct: 351 NVLLEKVKVPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSF 410
Query: 393 ANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPEL 432
++CL N++L P + W+C ++ G + VFP CP+L
Sbjct: 411 QDVCLRNVTLLGLPKT-EKWKCKDVSGYASDVFPLSCPQL 449
>gi|167523647|ref|XP_001746160.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775431|gb|EDQ89055.1| predicted protein [Monosiga brevicollis MX1]
Length = 464
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 141/392 (35%), Positives = 226/392 (57%), Gaps = 9/392 (2%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++T FGA+GDG+ N+LA A L++ GG +Y+P G +L FN+TSHL L+LE
Sbjct: 75 NLTAFGAIGDGRHNNSLAMAAA---LEAVQQSGGGTIYIPPGDFLLAPFNMTSHLVLYLE 131
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
G+++ + + W ++ P+PSYG+G + PG R+ S ++G+ L DV VTG+NGTI+ G
Sbjct: 132 AGSILRATDRLADWPIIPPMPSYGQGRDHPGPRHASFLHGFNLTDVTVTGNNGTINATGD 191
Query: 162 VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
+WW ++ + Y+R HL E + S + VS+LT ++P + +HPVY + ++++ P
Sbjct: 192 IWWARHNNGTEVYTRGHLYEVMWSRQLEVSHLTLTHSPFWTVHPVYSQDFRAIDLTILNP 251
Query: 222 PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQS 281
P SP T G+ PDS+ +V I DC + G D++++KSGWD YG + ++ I + S
Sbjct: 252 PYSPNTDGVDPDSTRDVVIRDCYFSTGDDSVAIKSGWDVYGYTVNISSNNITIENCVFHS 311
Query: 282 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYN-IN 340
+ + + GSEMSGGI+NV I + L G +T GRGGY+ + + D + N I
Sbjct: 312 PNAAGICLGSEMSGGIANVFARNITMTGCLQGFRIKTGMGRGGYVVNVTVEDVVIENSIQ 371
Query: 341 VAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 400
+A G G+ G HP ++P A P + I+ + G N T G+ + F + N+
Sbjct: 372 LAVGYNGHYGGHP-AGYNPLATPHVYNISLINARGGNNTQIAELVGLPNSQFRALRFQNV 430
Query: 401 SLSINPGSYNSWECSNIHGSSESVFPEPCPEL 432
++ G W CS+I G++++V P CP L
Sbjct: 431 HITGKQG----WTCSDISGTAQNVTPAACPSL 458
>gi|125583899|gb|EAZ24830.1| hypothetical protein OsJ_08610 [Oryza sativa Japonica Group]
Length = 489
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 212/340 (62%), Gaps = 5/340 (1%)
Query: 99 FLEKGAVILGS---QNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
F E ++L S ++ +W ++ LPSYG G E G R+ SLI+G L+DVV+TG NG+
Sbjct: 99 FREVQKLVLLSGFDRDERYWPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGHNGS 158
Query: 156 IDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
I+GQG VWW + LN +RP L++ + S++++V+N+T N+P ++ HP C+N+ + N
Sbjct: 159 INGQGEVWWMKHRRRILNNTRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSN 218
Query: 216 ISVHAPPES-PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
+++ AP S P T GI PDS +V IE+C I++G DAI++KSGWD+YGIAYGRP+ ++ I
Sbjct: 219 VTILAPISSAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVI 278
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
R V+ +S + ++ GSEMSGGI+NV VE + +++S G+ +T GRGGYIR I +
Sbjct: 279 RNVMARSLVSAGISIGSEMSGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNI 338
Query: 335 ELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFAN 394
N+ + H DD +D DA P I I+FK+I G + + G + P +
Sbjct: 339 TFDNVRAGIVIKVDYNEHADDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKD 398
Query: 395 ICLSNISLSINPGSYNSWECSNIHGSS-ESVFPEPCPELE 433
I ++S+ I+ + ++CS I G SVFP+PC L+
Sbjct: 399 ISFQDMSIGISYKKKHIFQCSFIEGRVIGSVFPKPCENLD 438
>gi|302143795|emb|CBI22656.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 133/230 (57%), Positives = 168/230 (73%), Gaps = 1/230 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R HS +TEFG +GDGKT NT AF+ AI +LK FA GGA+L VP GKWLTGSFNLTSH
Sbjct: 45 RKHSALLTEFGGIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLTSHF 104
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL++ K AVILGSQ S + + PLPSYG+G + G R+ SLI G L DVV+ G NGTI
Sbjct: 105 TLYIHKDAVILGSQEESDYPHIPPLPSYGKGRD-GGGRFSSLIFGTNLTDVVIIGGNGTI 163
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
+GQG VWWD F + L +RP+L+E + S+ V +SNLT +++P++N+HPVYCS+V IQ +
Sbjct: 164 NGQGRVWWDKFKQKKLVDTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPVYCSDVIIQGM 223
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
++ AP + P T GI PDS NV IEDC I G D I++KSGWD+YGI YG
Sbjct: 224 TILAPVDVPNTDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYG 273
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/242 (53%), Positives = 170/242 (70%), Gaps = 1/242 (0%)
Query: 26 GQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW 85
G ++ ++ R HS +T+FGA GDGKT+NT AF++AI L A GGAQL VP GKW
Sbjct: 286 GGSEEYRAINCRKHSAVLTDFGAKGDGKTMNTKAFKSAIANLSQVAGDGGAQLIVPPGKW 345
Query: 86 LTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLR 145
LTGSFNLTSH TLF+ K AVILG+Q+ + + +++ LPSYG G + G R+ SLI G L
Sbjct: 346 LTGSFNLTSHFTLFVHKDAVILGAQDEAAYPLIEILPSYGAGRD-GGGRHASLIFGTNLT 404
Query: 146 DVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHP 205
DVV+TG NGTI GQG WWD F + L +RP+L+E + S+ V +SNL +++P++N+HP
Sbjct: 405 DVVITGGNGTIHGQGQYWWDKFRADKLKDTRPYLIEIMYSDQVQISNLILIDSPSWNVHP 464
Query: 206 VYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAY 265
Y SNV IQ +++ AP SP T GI PDSS NV IEDC I G D I++KSGWD+YGI
Sbjct: 465 TYSSNVIIQWLTIIAPVGSPNTDGINPDSSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKC 524
Query: 266 GR 267
G+
Sbjct: 525 GK 526
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 373 IIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN-SWECSNIHGSSESVFPEPCPE 431
++ N+T + GI PF IC+SN+ + + W C+N+ G S V P C
Sbjct: 531 MVAENVTYSARLDGISGDPFTGICISNVKIGLTEKPKKLQWNCTNVEGVSSQVTPPSCDL 590
Query: 432 LENSSS 437
L S
Sbjct: 591 LHPSKK 596
>gi|326516252|dbj|BAJ88149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 297
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 124/288 (43%), Positives = 185/288 (64%), Gaps = 1/288 (0%)
Query: 153 NGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVH 212
NGTIDGQG +WW+ + +++LN++R HL+E ++S NV++SN+T N+P + +HPVYC NV
Sbjct: 6 NGTIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRNVV 65
Query: 213 IQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDV 272
I+++++ AP +P T GI PDSS VCIEDC I G D +++KSGWD+YGI+ G+P++++
Sbjct: 66 IKDLTILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNI 125
Query: 273 HIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVIS 332
I+RV + + S V FGSEMSGGISNV V +H+++S + + +T GRGGYI I I+
Sbjct: 126 IIQRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIA 185
Query: 333 DAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPF 392
+ + + V H DD +D ALP I I DI+G ++ A + A +
Sbjct: 186 NVTMEKVKVPIRFSRGSDDHSDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVY 245
Query: 393 ANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSS 440
IC N+SL W+C +++G + VFP PC EL N+ S+SS
Sbjct: 246 EGICFRNVSLRAIRRQVR-WQCESVYGEAHEVFPAPCEELRNNGSSSS 292
>gi|255641025|gb|ACU20792.1| unknown [Glycine max]
Length = 243
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/230 (52%), Positives = 162/230 (70%), Gaps = 1/230 (0%)
Query: 1 MKMPVALLLLLALCSAILINGEVSD-GQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLA 59
+++ A+LL+ L S + + +V G ++ R HS S+T+FG VGDGKT NT A
Sbjct: 14 IRLVCAVLLVTLLSSEVAESRKVKTVGTSFKYEAINCRTHSASLTDFGGVGDGKTSNTKA 73
Query: 60 FQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVD 119
FQ+AI +L +A KGGAQLYVP+GKWLTGSF+L SH TL+L K AV+L SQ+ S W ++
Sbjct: 74 FQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTLYLNKDAVLLASQDISEWPAIE 133
Query: 120 PLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHL 179
PLPSYGRG + P RY SLI G L DV+VTG NGTIDGQG+ WW F + L Y+RP+L
Sbjct: 134 PLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGGNGTIDGQGAFWWQKFHKKKLKYTRPYL 193
Query: 180 VEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVG 229
+E + S+ + +SNLT LN+P++N+HPVY SN+ I+ +++ AP SP T G
Sbjct: 194 IELMFSDQIQISNLTLLNSPSWNLHPVYSSNIIIKGLTIIAPVPSPNTDG 243
>gi|356574519|ref|XP_003555394.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Glycine max]
Length = 305
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 168/273 (61%), Gaps = 3/273 (1%)
Query: 163 WWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
WWD F + N +RP+++E + S+ + +SNLT +N+P++ +HP+Y SN+ I+ +++ AP
Sbjct: 2 WWDKFDKKQSNLTRPYMIEIMFSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPV 61
Query: 223 ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS 282
+SP T GI PDS N IEDC I G D +++KSGWDEYGI +G+PT + IRR+ S
Sbjct: 62 DSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISP 121
Query: 283 SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGG--YIRQIVISDAELYNIN 340
+ +A GSEMSGGI +V+VE I + + + +T GRG Y++ I + L +
Sbjct: 122 DSAVIALGSEMSGGIQDVRVEDIIAISTQSTVRIKTAVGRGAMXYVKDIFVKGMSLSTMK 181
Query: 341 VAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 400
F G+ GSHPD FDP ALP I I ++D++ TN+T + GI APF IC+SN+
Sbjct: 182 YVFWMTGSYGSHPDAGFDPKALPNITGINYRDVVATNVTYSAKLEGISNAPFTGICISNV 241
Query: 401 SLSINPGSYN-SWECSNIHGSSESVFPEPCPEL 432
S+ ++ W C+++ G + +V P C L
Sbjct: 242 SIQVSEQRKKLQWNCTDVAGVTSNVSPNSCQLL 274
>gi|357452825|ref|XP_003596689.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
gi|355485737|gb|AES66940.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
Length = 238
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 151/207 (72%), Gaps = 15/207 (7%)
Query: 24 SDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSG 83
S+ C + RPHSVSITEFGAVGD TLNT AFQNAIFYLK +ADKGGA+L+VP+G
Sbjct: 25 SNSSCKLINIKEVRPHSVSITEFGAVGDWITLNTKAFQNAIFYLKLYADKGGAKLFVPAG 84
Query: 84 KWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM 143
+W TGSF+L SHLTL L+K AVILGS NP W VVDP PSYGRG ELPG ++SLI G
Sbjct: 85 RWFTGSFDLISHLTLLLDKDAVILGSTNPGDWPVVDPPPSYGRGRELPGGWHRSLIYGCN 144
Query: 144 LRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNI 203
L DV++TG+NGTIDGQ S+WW +E ++S+NV++SN+TFLN+P + +
Sbjct: 145 LTDVIITGNNGTIDGQRSIWW---------------IESMNSKNVLISNVTFLNSPFWTM 189
Query: 204 HPVYCSNVHIQNISVHAPPESPYTVGI 230
H VYCS+V +QN+++ AP P T GI
Sbjct: 190 HHVYCSHVTVQNVTILAPFGLPNTDGI 216
>gi|71535025|gb|AAZ32910.1| polygalacturonase-like protein [Medicago sativa]
Length = 206
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/201 (58%), Positives = 152/201 (75%)
Query: 34 LDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLT 93
L+ R HSVS+ +FG VGDGKT NT AF++AI +L A +GG+QLYVP+GKWLTGSF+L
Sbjct: 4 LNCRAHSVSLKDFGGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSLI 63
Query: 94 SHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDN 153
SH TL+L K AV+L SQ+ + W V+ PLPSYGRG + R+ SLI G L DV+VTGDN
Sbjct: 64 SHFTLYLHKDAVLLASQDINEWPVIKPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVTGDN 123
Query: 154 GTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHI 213
GTIDGQGS WW F ++ L Y+RP+L+E + S+N+ +SNLT L++P++NIHPVY SN+ I
Sbjct: 124 GTIDGQGSFWWQQFHNKKLKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHPVYSSNIII 183
Query: 214 QNISVHAPPESPYTVGIVPDS 234
+ I++ AP SP T GI PDS
Sbjct: 184 KGITIIAPIRSPNTDGINPDS 204
>gi|219120807|ref|XP_002185635.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582484|gb|ACI65105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 451
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 154/422 (36%), Positives = 218/422 (51%), Gaps = 45/422 (10%)
Query: 52 GKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNL--------TSHLTLFLEKG 103
G+ +T AF+ AI ++S GG +L +P GSFNL TSHL LFL+K
Sbjct: 23 GRRDDTAAFEQAIDIIRS---NGGGRLIIPGAP--DGSFNLYRIRPINLTSHLVLFLQKN 77
Query: 104 AVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDN---GTIDGQG 160
AVI + S W ++ PLPSYG+G + G RY SL++G L ++ + G+ G IDGQG
Sbjct: 78 AVITAIADESVWPLIPPLPSYGQGRDHVGPRYSSLLHGEYLTNITIRGEPDSPGIIDGQG 137
Query: 161 SVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
WWD Y+R HLVEF+ S + + NL N+P + H C +VH+QN+ V A
Sbjct: 138 RYWWDRRRHNRDRYTRGHLVEFMYSSRIRMYNLRLQNSPFWTNHFYDCDDVHVQNVHVKA 197
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
P SP T G PDSS NV IED G D +++KSGWD +GI Y P+ ++ IR V Q
Sbjct: 198 PWSSPNTDGWDPDSSRNVLIEDSTYRGGDDCVAIKSGWDCFGIDYDTPSENITIRNVTCQ 257
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD------- 333
+ +A G+EMSGG+ NV VE + + +T RGGY+ +V +
Sbjct: 258 GPY-AGIAIGTEMSGGVRNVTVENVTFTYANKPANIKTGNTRGGYVHDVVYQNIRITGHI 316
Query: 334 -----AELYNI-NVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAG----N 383
++Y+ N +C N ++ P+ LP + + F + GT +
Sbjct: 317 DQAIHVDMYHYHNTPNPSCSN-------NYQPNQLPHLRDLYFFNFEGTQALTESHEVFH 369
Query: 384 FTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGS--SESVFP-EPCPELENSSSNSS 440
F G+ E+P + L NIS P S W CSN+ GS + SV P PCPE + + +S
Sbjct: 370 FVGLPESPIEYVFLENISFPT-PVSSLGWNCSNVQGSVKNNSVTPWPPCPEFPSVTVENS 428
Query: 441 ST 442
T
Sbjct: 429 ET 430
>gi|218187051|gb|EEC69478.1| hypothetical protein OsI_38684 [Oryza sativa Indica Group]
Length = 365
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 126/226 (55%), Positives = 170/226 (75%), Gaps = 2/226 (0%)
Query: 230 IVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAF 289
++ DS N+CIED I++ HDAISLKSGWD YGI GRP +D+HI RV LQ+S G+++AF
Sbjct: 140 VITDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAALAF 199
Query: 290 GSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNC 349
GSEMSGGIS++ V+ ++++ S GI F+T GRGGYIR +VISD ++ ++NVA G+
Sbjct: 200 GSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDW 259
Query: 350 GSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSI-NPGS 408
+HPD+ FDP ALP I++IT K+++GTNI++AG +GI PF NICLSNIS S+ +
Sbjct: 260 STHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLADSTQ 319
Query: 409 YNSWECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRAS 454
+SW CSNI G SE VFPEPCP+L +SSS +SS CFSL+ Y+ A+
Sbjct: 320 SSSWSCSNISGYSELVFPEPCPDLHHSSS-NSSICFSLLTYHALAA 364
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/275 (42%), Positives = 163/275 (59%), Gaps = 27/275 (9%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
HSV+I+EFGAVGDG T+NTL FQNAIFYL+SFADKGGAQLYVP G+WLTGSFNLTSHLT+
Sbjct: 31 HSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTI 90
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI-- 156
FLEK AVI+G++ S W +V+PLPSYG+GI+LPG R++SLING+ + DVV+T +
Sbjct: 91 FLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITDSCSNMCI 150
Query: 157 -DGQGSVWWDWFSSQS------LNYSRPHLVEFISSENVVVS---NLTFLNAPAYNIHPV 206
D SV D S +S + RP IS ++ S L F + + I
Sbjct: 151 EDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAALAFGSEMSGGI--- 207
Query: 207 YCSNVHIQNISVHAPPE------SPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
S++H+ ++++H +P G + D V I D + + AI W
Sbjct: 208 --SDIHVDHLNIHGSSRGILFKTAPGRGGYIRD----VVISDVQMEDVNVAIKFTGDWST 261
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSG 295
+ + P+ I R+ L++ G++++ +SG
Sbjct: 262 HPDNHFDPSALPMINRITLKNMVGTNISVAGVLSG 296
>gi|54290861|dbj|BAD61522.1| polygalacturonase-like [Oryza sativa Japonica Group]
Length = 261
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 162/248 (65%), Gaps = 2/248 (0%)
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
F ++P +NIHPVYCSNV I+N++V AP +SP T GI PDSS NVCIEDC I+ G D I++
Sbjct: 13 FQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAI 72
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
KSGWDEYG+AYGRP++ + IRR+ SS + A GSE SGG+ +V E ++ + S GI
Sbjct: 73 KSGWDEYGMAYGRPSSHITIRRI-TGSSPFAGFAVGSETSGGVEHVLAEHLNFFSSGFGI 131
Query: 315 EFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDII 374
+T GRGG+IR + +SD L ++ G+ G HPDD +D +ALP +D +T K++
Sbjct: 132 HIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQ 191
Query: 375 GTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELEN 434
G NI AG+ GI + F+ ICLSN+ L+ + W+C + G++ V P PC EL +
Sbjct: 192 GQNIREAGSIKGIATSAFSRICLSNVKLN-GGAAVRPWKCEAVSGAALDVQPSPCTELTS 250
Query: 435 SSSNSSST 442
+S S T
Sbjct: 251 TSGMSFCT 258
>gi|388521929|gb|AFK49026.1| unknown [Lotus japonicus]
Length = 388
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/264 (39%), Positives = 159/264 (60%), Gaps = 1/264 (0%)
Query: 172 LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIV 231
+RP+++E + S + +SNLT +N+P++ +HP+Y S++ IQ +++ AP +SP T GI
Sbjct: 122 FTLTRPYMIEIMYSNQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGID 181
Query: 232 PDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGS 291
PDS N IEDC I G D I++KSGWDEYGI G P+ + IRR+ S + +A GS
Sbjct: 182 PDSCSNTRIEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHIIIRRLTCISPDSAMIALGS 241
Query: 292 EMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGS 351
EMSGGI +++ E + ++ + + +T GRG Y+R I + L+ + F G+ GS
Sbjct: 242 EMSGGIQDIRAEDLTAINTQSAVRIKTAVGRGAYVRNIFVEGMNLFTMKYVFWMTGSYGS 301
Query: 352 HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNS 411
HPD FDP ALP I I ++D+I N+ GI PF IC+SN ++ G +
Sbjct: 302 HPDTGFDPKALPTITGINYRDVIAKNVAYPAKLEGIANDPFTGICISNANIE-KVGKKLA 360
Query: 412 WECSNIHGSSESVFPEPCPELENS 435
W C+++HG + +V PEPC L+
Sbjct: 361 WNCTDVHGVTSNVSPEPCALLQEK 384
>gi|238005826|gb|ACR33948.1| unknown [Zea mays]
Length = 256
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/191 (56%), Positives = 141/191 (73%), Gaps = 1/191 (0%)
Query: 41 VSITEFGAVGDGKTLNT-LAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+S+ FGA GDG+TLNT + + +GG LYVP G WLTG FNLTSH+TLF
Sbjct: 44 MSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLTSHMTLF 103
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
L +GA++ +Q+ S W ++DPLPSYGRG ELPG RY SLI+G+ L+DV +TG+NGTIDGQ
Sbjct: 104 LARGAIVRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGHGLQDVFITGENGTIDGQ 163
Query: 160 GSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVH 219
G VWWD + ++L ++RPHL+E + S +VVVSNL F ++P +NIHPVYCSNV I N++V
Sbjct: 164 GGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYCSNVVIANLTVL 223
Query: 220 APPESPYTVGI 230
AP +SP T GI
Sbjct: 224 APHDSPNTDGI 234
>gi|413949760|gb|AFW82409.1| hypothetical protein ZEAMMB73_244455 [Zea mays]
Length = 313
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 150/232 (64%)
Query: 110 QNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSS 169
++ HW ++ PLPSYGRG + PG RY + I G L DV++TG NGTI+G+G VWWD F +
Sbjct: 24 KDMKHWPLIAPLPSYGRGRDEPGARYSNFIGGSNLTDVIITGKNGTINGKGQVWWDKFHA 83
Query: 170 QSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVG 229
+ L + R HL+E + SEN+++SN+TF+NAP +N+HP YC+NV I +++ AP SP T G
Sbjct: 84 KELKFIRGHLLELLYSENIIISNVTFVNAPYWNLHPTYCTNVTISGVTILAPVNSPNTDG 143
Query: 230 IVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAF 289
I P SS V IEDC I G D +++KSGWDEYGI + P+ + I+R+ S + + +A
Sbjct: 144 IDPKSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIQRLTSVSPTSAMIAL 203
Query: 290 GSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINV 341
SEMSGGI +V+ + ++ + I +T G + + + A L+ + +
Sbjct: 204 SSEMSGGIRDVRAKDSVAINTESAIRVKTLGAIAGVLSRNELVAAALFTLAI 255
>gi|413941562|gb|AFW74211.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 291
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 145/193 (75%), Gaps = 1/193 (0%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQ-LYVPSGKWLTGSFNLTSHLTLF 99
S+ EFGAVGDG TLNT AF+ A+ L + A GG L VP G+WLTGSFNLTS TLF
Sbjct: 88 ASVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTSRFTLF 147
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
L +GAVILGSQ+P W ++ PLPSYGRG E G R+ SLI+G L DVV+TG NGTIDGQ
Sbjct: 148 LHRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQ 207
Query: 160 GSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVH 219
G +WW+ + +++LN++R HL+E ++S NV++S++T N+P + +HPVYCSNV ++++++
Sbjct: 208 GHMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCSNVVMKDLTIL 267
Query: 220 APPESPYTVGIVP 232
AP ++P T GI P
Sbjct: 268 APLDAPNTDGIDP 280
>gi|414864494|tpg|DAA43051.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 220
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 96/173 (55%), Positives = 127/173 (73%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R H +TE+GAVGDG+TLNT AF A+ L A GGA L VP GKWLTG FNLTS
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L++GA IL SQ+ HW ++ PLPSYGRG + PG RY + I G L DV++TG NGTI
Sbjct: 101 TLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGKNGTI 160
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
+GQG VWWD F ++ L ++R HL+E + S+N+++SN+TF++AP +N+HP YC+
Sbjct: 161 NGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAPYWNLHPTYCT 213
>gi|403744854|ref|ZP_10953930.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121782|gb|EJY56052.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 865
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 216/413 (52%), Gaps = 51/413 (12%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V++ +FGA+GDGK+ +T A Q AI + KGG LYVP+G + T L S +TL+L
Sbjct: 132 VNVKQFGAIGDGKSDDTRALQRAIDAVP----KGGT-LYVPAGTYYTAPLQLKSDMTLYL 186
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
KGA +LGS N D P+ S G E+ RY SLI G +R+V +TG+ G IDG G
Sbjct: 187 AKGATLLGSSN---IDAYKPIWSRWEGTEM--YRYMSLITGDNVRNVTITGE-GVIDGNG 240
Query: 161 ---------SVWWDWFS--------------------SQSLNYSRPHLVEFISSENVVVS 191
+ + +W+S SQ L Y+RP L+EF+ S+N+++
Sbjct: 241 ETPIHDNAGNTYGNWWSKQYKEPLSDPAVSLVQSPNYSQGLPYARPSLIEFLHSQNILIQ 300
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
+T N+P++ IHPVYC +V + ++ + PP S T G+ PDS + + I D ++G D
Sbjct: 301 GVTVQNSPSWTIHPVYCDHVTLADVHIVNPPTSDNTDGVDPDSVNGMQIIDDTFSVGDDD 360
Query: 252 ISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL 311
I++KSG D G G P+ ++ +R + +G V+ GSEMSGG+ NV VE +
Sbjct: 361 IAIKSGKDAEGRRIGIPSQNIVVRNCHML--NGHGVSIGSEMSGGVQNVLVENCDFDGTN 418
Query: 312 NGIEFRTTKGRGGYIRQIVISDAELYNINV-AFGACGNCGSHPDDDFDP----DALPAID 366
G+ +T +GRGG ++ I + NI AF N S+ P DA PAI
Sbjct: 419 AGLRIKTLRGRGGIVQNITFDHVSMSNIQAQAFIIDENYASN-GSALPPGPVTDATPAIR 477
Query: 367 QITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHG 419
+ F +I A F+G+ E P NI N++++ G+ + + N+ G
Sbjct: 478 NLNFDNITVNGAKQAMYFSGLAELPIQNIAFHNVAIN---GAGSGIQAENVEG 527
>gi|129771144|gb|ABO31369.1| polygalacturonase [Gossypium hirsutum]
Length = 219
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 149/219 (68%), Gaps = 5/219 (2%)
Query: 135 YKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLT 194
+++ + G L DVV+ G+NGTIDGQG +WW+ + +L ++RP+LVEF++S +++SN+
Sbjct: 2 HRASLPGDGLPDVVIRGENGTIDGQGGIWWNMWRQGNLPFTRPNLVEFMNSRGIIISNVI 61
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
F N+P +NI PVYCSNV I+ +++ AP +SP T GI PDSS NVCIED I+ G D +++
Sbjct: 62 FKNSPFWNIPPVYCSNVVIRYVTILAPTDSPNTDGIDPDSSSNVCIEDSFISTGDDLVAV 121
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
KSGWDEYGI YGRP++ + IRRV SS + +A GSE SGG+ +V E I +Y+S G+
Sbjct: 122 KSGWDEYGIGYGRPSSHITIRRV-TGSSPFAGIAVGSETSGGVEHVLAENIVIYNSGIGV 180
Query: 315 EFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHP 353
+T GRGG+I+ I +S + N+ SHP
Sbjct: 181 NIKTNIGRGGFIKNITVSPVFMENVRTGI----KIASHP 215
>gi|317474355|ref|ZP_07933629.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909036|gb|EFV30716.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 477
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 202/391 (51%), Gaps = 40/391 (10%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++ ++GA+G+ TL T AFQ AI + +D+GG ++ VP+G +++G L S++ +
Sbjct: 11 NVNDYGAIGN-HTLCTEAFQKAI---DTASDRGGGKVIVPAGDYVSGPLFLRSNIEFEVC 66
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GA I S + ++ +++ GIE + Y SL G+ L++V +TG G IDGQG
Sbjct: 67 SGATIYFSNDIANTPIIN---GSWEGIER--KVYASLFTGHDLKNVTITG-RGRIDGQGK 120
Query: 162 VWWDWF--------------------SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAY 201
WWD F L Y RP ++ ENV +++LT N+P++
Sbjct: 121 AWWDAFWETDKMRTAAGIREREPENPEGSPLKYPRPRMINLYRCENVKIADLTITNSPSW 180
Query: 202 NIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEY 261
+HPVYC NV I IS+ P ESP T GI PD + V I +C I G D I+LKSG++E+
Sbjct: 181 TVHPVYCRNVIIDGISIIQPYESPNTDGIDPDCCNGVRISNCYIDCGDDCITLKSGYNEH 240
Query: 262 GIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKG 321
G G P ++ I S+V GSEMSGGI NV V +L G+ +T +G
Sbjct: 241 GRKKGIPCENIVISNCTFAHGR-SAVGIGSEMSGGIKNVTVMNCVFKGTLRGLRVKTGRG 299
Query: 322 RGGYIRQIVISDAELYN----INVAFGACGNCGS-HPDDDFDPDALPAIDQITFKDIIGT 376
RGG + I S + N I++ G G G +P ++ P I FKDIIGT
Sbjct: 300 RGGTVENIFASGIIMENLREGISIDMGYEGVSGKIYP----VTESTPFFKNIRFKDIIGT 355
Query: 377 NITIAGNFTGIQEAPFANICLSNISLSINPG 407
N+ A N G+ EAP I L +I + G
Sbjct: 356 NVEQAINIIGLAEAPPQFIVLEDIRMVCKRG 386
>gi|297600007|ref|NP_001048308.2| Os02g0781000 [Oryza sativa Japonica Group]
gi|255671294|dbj|BAF10222.2| Os02g0781000, partial [Oryza sativa Japonica Group]
Length = 285
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 163/261 (62%), Gaps = 2/261 (0%)
Query: 175 SRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES-PYTVGIVPD 233
+RP L++ + S++++V+N+T N+P ++ HP C+N+ + N+++ AP S P T GI PD
Sbjct: 1 TRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPD 60
Query: 234 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 293
S +V IE+C I++G DAI++KSGWD+YGIAYGRP+ ++ IR V+ +S + ++ GSEM
Sbjct: 61 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEM 120
Query: 294 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHP 353
SGGI+NV VE + +++S G+ +T GRGGYIR I + N+ + H
Sbjct: 121 SGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHA 180
Query: 354 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWE 413
DD +D DA P I I+FK+I G + + G + P +I ++S+ I+ + ++
Sbjct: 181 DDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHIFQ 240
Query: 414 CSNIHGSS-ESVFPEPCPELE 433
CS I G SVFP+PC L+
Sbjct: 241 CSFIEGRVIGSVFPKPCENLD 261
>gi|414873754|tpg|DAA52311.1| TPA: hypothetical protein ZEAMMB73_541408 [Zea mays]
Length = 253
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 232 PDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGS 291
PDSS NVCI C + G D I +KSGWDEYGI++ +P++++ I + ++ GS +AFGS
Sbjct: 10 PDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGS 69
Query: 292 EMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGS 351
EMSGGIS V+ + + +SL+GI +T GRGGY+ + I+D + N+++A GN G
Sbjct: 70 EMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGE 129
Query: 352 HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNS 411
HPDD +D ALP I IT KD++G NI +AG GIQ F+NICLSN+SLS+ S +
Sbjct: 130 HPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQ--SAHP 187
Query: 412 WECSNIHGSSESVFPEPCPELENSSSNSSSTCF 444
W CS I G S SV PE C +L S+ +S C+
Sbjct: 188 WNCSLIEGYSNSVIPESCEQLR-SNCRQTSICY 219
>gi|357139199|ref|XP_003571172.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 266
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 125/172 (72%), Gaps = 5/172 (2%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
PRP VSITEFG VGDG+TLNT A + A++ ++ G L +P G WL+GSFNLTSH
Sbjct: 98 PRPEVVSITEFGGVGDGRTLNTWALRKAVYRIQC-----GTTLLLPVGTWLSGSFNLTSH 152
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
+TLFL +GAV+ +Q+ W +++PLPSYGRG ELPG RY S I+G LRDVV+TGD G
Sbjct: 153 MTLFLARGAVLKATQDTRSWLLMEPLPSYGRGRELPGARYASFIHGNGLRDVVITGDKGV 212
Query: 156 IDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
IDGQG VWW+ + ++L ++RP+LVEF+ S + +SN+ N+ +NIHPVY
Sbjct: 213 IDGQGDVWWNMWRRRTLQHTRPNLVEFVHSSGIHISNVVLKNSLFWNIHPVY 264
>gi|442804408|ref|YP_007372557.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740258|gb|AGC67947.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 430
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 195/374 (52%), Gaps = 23/374 (6%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+IT+FGAV DGKTL T AF+ A+ K + GG +YVP+GK+LTG +L S+ L ++
Sbjct: 8 NITDFGAVPDGKTLCTEAFKKAV---KKCEEAGGGTIYVPAGKFLTGPIHLVSNTNLHID 64
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GAV+L SQN + +V Y R Y LI G + +V +TG +GT+DGQG
Sbjct: 65 AGAVLLFSQNIEDYPLV-----YSRWEGEEAEVYSPLIYGDKVENVSITG-HGTLDGQGE 118
Query: 162 VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
WW + L Y RP + F SE V++ + +N+PA+ I+PV C+NV I I++ P
Sbjct: 119 PWWRLQREKQLKYPRPRFICFQESERVLIQGIKIINSPAWTINPVRCNNVVIDGITIKNP 178
Query: 222 PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQS 281
+SP T GI PDS NV I +C I++G D +++KSG EY Y P ++ I +
Sbjct: 179 ADSPNTDGINPDSCRNVRITNCYISVGDDCVAIKSGV-EYS-KYRIPCENITITNCTMLD 236
Query: 282 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINV 341
G V GSEMSG + N+ + + GI +T +GRGG + I +S+ + +
Sbjct: 237 GHG-GVVIGSEMSGCVRNITISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIIMKKVMC 295
Query: 342 -----AFGACGNCGSHP---DDDFDP--DALPAIDQITFKDIIGTNI-TIAGNFTGIQEA 390
+ CG G P D + P + P ++ +I AG F G+ E
Sbjct: 296 PLVMNMYYFCGKGGKEPIVKDKNPHPVNEGTPVFRRVHLSNISAREAGACAGFFYGLPEM 355
Query: 391 PFANICLSNISLSI 404
P +I ++ + +
Sbjct: 356 PIEDISFHDVYIHM 369
>gi|59044763|gb|AAW84064.1| pectate lyase [uncultured bacterium]
Length = 466
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 199/373 (53%), Gaps = 23/373 (6%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
I FGA DG+T +T A AI ++ A GG +Y+P+G++LTG L SH+ L LE
Sbjct: 10 IRTFGAQPDGETPSTAAITAAI---ETCAAAGGGVVYIPAGRFLTGPLRLKSHVRLHLEA 66
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
GA +L SQ+P+ + V L + G E+ Y I G L V +TG GTIDG+G
Sbjct: 67 GAHLLFSQDPADYPV---LETRWEGKEV--LTYAHQIYGEDLEGVAITG-RGTIDGRGET 120
Query: 163 WWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
WW F +++ + RP L+ F +++++ +T +N+PA+ I+PV C V I +++ PP
Sbjct: 121 WWRLFRAKAFTHPRPRLIAFTRCKDILIEGVTLVNSPAWTINPVMCERVTIDKVTIINPP 180
Query: 223 ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS 282
+SP T GI PDSS NV I +C I +G D I++K+G ++ Y P ++ I L++
Sbjct: 181 DSPNTDGIDPDSSRNVYITNCYIDVGDDCIAIKAGREDS--LYRTPCENIVIANCLMRHG 238
Query: 283 SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQI----VISDAEL-- 336
G V GSE SGGI V + D+ GI ++ +GRGG++ + +I + L
Sbjct: 239 HG-GVVIGSETSGGIRKVVITNCIFEDTDRGIRLKSRRGRGGFVEDLRATNIIMEKVLCP 297
Query: 337 YNINVAFGACGNCGSHPDDDFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAP 391
+ +N+ + G D +P +A P+ +++F I + A F G+ E P
Sbjct: 298 FVLNMYYDTGGGVIDERAHDLEPHPVSEATPSFRRLSFSHITAREVQAAAAFLYGLPEQP 357
Query: 392 FANICLSNISLSI 404
++ +I + +
Sbjct: 358 LEDVLFDDIWIEL 370
>gi|47497401|dbj|BAD19438.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 277
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 156/251 (62%), Gaps = 2/251 (0%)
Query: 185 SENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES-PYTVGIVPDSSDNVCIEDC 243
S++++V+N+T N+P ++ HP C+N+ + N+++ AP S P T GI PDS +V IE+C
Sbjct: 3 SKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIENC 62
Query: 244 IIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVE 303
I++G DAI++KSGWD+YGIAYGRP+ ++ IR V+ +S + ++ GSEMSGGI+NV VE
Sbjct: 63 YISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVTVE 122
Query: 304 KIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALP 363
+ +++S G+ +T GRGGYIR I + N+ + H DD +D DA P
Sbjct: 123 DVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDAFP 182
Query: 364 AIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSS-E 422
I I+FK+I G + + G + P +I ++S+ I+ + ++CS I G
Sbjct: 183 DITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHIFQCSFIEGRVIG 242
Query: 423 SVFPEPCPELE 433
SVFP+PC L+
Sbjct: 243 SVFPKPCENLD 253
>gi|413941560|gb|AFW74209.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
gi|413941561|gb|AFW74210.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 280
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQ-LYVPSGKWLTGSFNLTSHLTLF 99
S+ EFGAVGDG TLNT AF+ A+ L + A GG L VP G+WLTGSFNLTS TLF
Sbjct: 88 ASVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTSRFTLF 147
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
L +GAVILGSQ+P W ++ PLPSYGRG E G R+ SLI+G L DVV+TG NGTIDGQ
Sbjct: 148 LHRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQ 207
Query: 160 GSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNV 211
G +WW+ + +++LN++R HL+E ++S NV++S++T N+P + +HPVYC +V
Sbjct: 208 GHMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCRSV 259
>gi|414864492|tpg|DAA43049.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 205
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/163 (55%), Positives = 119/163 (73%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R H +TE+GAVGDG+TLNT AF A+ L A GGA L VP GKWLTG FNLTS
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL+L++GA IL SQ+ HW ++ PLPSYGRG + PG RY + I G L DV++TG NGTI
Sbjct: 101 TLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGKNGTI 160
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAP 199
+GQG VWWD F ++ L ++R HL+E + S+N+++SN+TF++AP
Sbjct: 161 NGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAP 203
>gi|146295422|ref|YP_001179193.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408998|gb|ABP66002.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 447
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 194/375 (51%), Gaps = 23/375 (6%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+++ +FGAVG+G+ +T AF+ AI ++ ++GG +YVP+G +LTG +L S++TL++
Sbjct: 3 LNVRDFGAVGNGQVKDTEAFKKAI---EASWEQGGGTVYVPAGVYLTGPIHLKSNITLYI 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
E GA + S + + +V Y R Y LI ++ V G GTIDGQG
Sbjct: 60 ESGATLKFSNDLDDFPLV-----YTRWEGEEQEAYSPLIYAENAENIAVVG-FGTIDGQG 113
Query: 161 SVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
+WW ++ L Y RP V F +NV + + +N+P++ ++P+ C NV + N+ +
Sbjct: 114 EMWWKLHRNKELKYPRPRTVCFYRCKNVTIEGIKIVNSPSWTVNPIECENVTVHNVKIQN 173
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
P +SP T GI P+S + V I +C I +G D ++LKSG ++ + P ++ I ++
Sbjct: 174 PYDSPNTDGINPESCEGVRISNCYIDVGDDCVTLKSGTEDCKVRI--PCENIAITNCIMA 231
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN 340
G + GSEMSGG+ NV + + GI +T +GRGG + I +S+ + N+
Sbjct: 232 HGHG-GIVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGIVEDIRVSNIVMKNVI 290
Query: 341 VAFG-----ACGNCGSHPDD-DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQE 389
F CG G D P P + +I D+I A F G+ E
Sbjct: 291 CPFAFYMYYHCGKGGKEKRVWDKSPYPVDSTTPIVRRIYISDVIVRQARAAAGFLYGLTE 350
Query: 390 APFANICLSNISLSI 404
P ++ SN+++ +
Sbjct: 351 MPIEDVVFSNVTVEM 365
>gi|109509134|gb|ABG34276.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 241
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 128/216 (59%), Gaps = 1/216 (0%)
Query: 229 GIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 288
GI PDS N IEDC I G D +++KSGWDEYGIAYG PT + IRR+ S + + +A
Sbjct: 2 GINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPTSAVIA 61
Query: 289 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGN 348
GSEMSGGI +V+ E I +S +G+ +T GRGGY++ I + + + F GN
Sbjct: 62 LGSEMSGGIEDVRAEDILAINSESGVRIKTAIGRGGYVKDIYVKGMTMRTMKWVFWMTGN 121
Query: 349 CGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGS 408
GSH D+++DP+ALP I I ++D++ N+T+A GI PF IC+SN+++ +
Sbjct: 122 YGSHADNNYDPNALPLIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIGLAQKP 181
Query: 409 YN-SWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
W C++I G S SV P+PC L N C
Sbjct: 182 KKLQWNCTDISGISSSVVPQPCNALPNQGPEKLPAC 217
>gi|406667543|ref|ZP_11075299.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
gi|405384596|gb|EKB44039.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
Length = 448
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 130/376 (34%), Positives = 194/376 (51%), Gaps = 23/376 (6%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I +FGAVGDG NT A + A+ ++ + GG +YVP+G ++TG+ L S++ L LE
Sbjct: 9 NIEQFGAVGDGWANNTSAIKRAV---EACSQGGGGTVYVPAGVFVTGAIELKSNMHLHLE 65
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
G+ +L S + + V+ R Y S I +++ +TG GT++GQG+
Sbjct: 66 AGSELLFSNDREDYPVIS-----SRWEGASRDVYMSCIYACHAKNIAITG-FGTLNGQGA 119
Query: 162 VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
WW F +L Y RP+LV F E V V + +++P++ +HP C NV I +S+ P
Sbjct: 120 YWWKLFKEDALAYPRPNLVSFDHCERVHVEQVKMIDSPSWTVHPNDCDNVTISAVSIVNP 179
Query: 222 PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQS 281
SP T GI P+S NV I DC I +G D I++KSG ++ P ++ I +
Sbjct: 180 ANSPNTDGINPESCRNVRISDCSIDVGDDCIAIKSGTEDAERVI--PCENITITNCTMLH 237
Query: 282 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINV 341
G V FGSEMSG I NV V + GI F++ +GRGG I I +++ + NI
Sbjct: 238 GHG-GVVFGSEMSGDIRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNNIVMNNIIC 296
Query: 342 AF-----GACGNCGSHP---DDDFDP-DAL-PAIDQITFKDIIGTNITIAGNFT-GIQEA 390
F G G P D + P AL P I F +I T++T A F G+ E
Sbjct: 297 PFILNLYYYHGPRGMEPYVSDKEVQPVTALTPKFRHIHFSNITATDVTAAAGFMYGLPEM 356
Query: 391 PFANICLSNISLSINP 406
P +I S+I +++ P
Sbjct: 357 PVEDITFSHIRIAMKP 372
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 190/375 (50%), Gaps = 23/375 (6%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V++ EFGA G+G +T AF+ AI + +GG ++VP+G + G+ +L S++TL++
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAI---EECEKQGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
E GAV+ SQ+ + +V Y R + Y LI +V V G GTIDGQG
Sbjct: 60 ESGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVG-FGTIDGQG 113
Query: 161 SVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
WW ++ L Y RP + F NV + + +N+P++ ++P+ C NV + N+ +
Sbjct: 114 EKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQN 173
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
P +SP T GI P+S V I +C I +G D ++LKSG ++ P ++ I ++
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMA 231
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN 340
G V GSEMSGG+ NV + + GI +T +GRGG + I +S+ + N+
Sbjct: 232 HGHG-GVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVM 290
Query: 341 VAFG-----ACGNCGSHPDD-DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQE 389
F CG G D P ++ P + +I D++ A F G+ E
Sbjct: 291 CPFAFYMYYHCGKGGKEKRVWDKSPYPVDESTPIVRRIYISDVVVREARAAAGFLYGLTE 350
Query: 390 APFANICLSNISLSI 404
P ++ SN+++ +
Sbjct: 351 MPIEDVVFSNVTVEM 365
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 188/375 (50%), Gaps = 23/375 (6%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V++ EFGA G+G T AF+ AI + +GG ++VP+G + G+ +L S++TL++
Sbjct: 3 VNVREFGAKGNGIDKVTEAFKKAI---EECEKQGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
E GAV+ SQ+ + +V Y R + Y LI +V V G GTIDGQG
Sbjct: 60 ESGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVG-FGTIDGQG 113
Query: 161 SVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
WW ++ L Y RP + F NV + + +N+P++ ++P+ C NV + N+ +
Sbjct: 114 EKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQN 173
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
P +SP T GI P+S V I +C I +G D ++LKSG ++ P ++ I ++
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMA 231
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN 340
G V GSEMSGG+ NV + + GI +T +GRGG + I +S+ + N+
Sbjct: 232 HGHG-GVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVM 290
Query: 341 VAFG-----ACGNCGSHPDD-DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQE 389
F CG G D P D P + +I D++ A F G+ E
Sbjct: 291 CPFAFYMYYHCGKGGKEKRVWDKSPYPVDDTTPIVRRIYISDVVVREARAAAGFLYGLTE 350
Query: 390 APFANICLSNISLSI 404
P ++ SN+++ +
Sbjct: 351 MPIEDVVFSNVTVEM 365
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 188/375 (50%), Gaps = 23/375 (6%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V++ EFGA G+G +T AF+ AI + +GG ++VP+G + TG +L S++TL++
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAI---EECEKQGGGTIFVPAGIYHTGPIHLKSNMTLYI 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
E GAV+ SQ+ + +V Y R + Y LI +V V G GTIDGQG
Sbjct: 60 ENGAVLKFSQDIEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVGF-GTIDGQG 113
Query: 161 SVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
WW ++ L Y RP + F NV + + +N+P++ ++P+ C NV + N+ +
Sbjct: 114 EKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQN 173
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
P +SP T GI P+S V I +C I +G D ++LKSG ++ P ++ I ++
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMA 231
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN 340
G V GSEMSGG+ NV + + GI +T +GRGG + I +S+ + N+
Sbjct: 232 HGHG-GVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVM 290
Query: 341 VAFG-----ACGNCGSHPDD-DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQE 389
F CG G D P P + +I D++ A F G+ E
Sbjct: 291 CPFAFYMYYHCGKGGKEKKVWDKSPYPVDSTTPVVRRIYISDVVVREARAAAGFLYGLTE 350
Query: 390 APFANICLSNISLSI 404
P ++ SN+++ +
Sbjct: 351 MPIEDVVFSNVTVEM 365
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 189/375 (50%), Gaps = 27/375 (7%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V++ EFGA G+G +T AF+ AI + +GG ++VP+G + G+ +L S++TL++
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAI---EECEKQGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
E GAV+ SQ+ + + G E+ + Y LI +V V G GTIDGQG
Sbjct: 60 ESGAVLKFSQDEEEY-------TRWEGEEM--QVYSPLIYAENAENVAVVG-FGTIDGQG 109
Query: 161 SVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
WW ++ L Y RP + F NV + + +N+P++ ++P+ C NV + N+ +
Sbjct: 110 EKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQN 169
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
P +SP T GI P+S V I +C I +G D ++LKSG ++ P ++ I ++
Sbjct: 170 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMA 227
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN 340
G V GSEMSGG+ NV + + GI +T +GRGG + I +S+ + N+
Sbjct: 228 HGHG-GVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVM 286
Query: 341 VAFG-----ACGNCGSHPDD-DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQE 389
F CG G D P D P + +I D++ A F G+ E
Sbjct: 287 CPFAFYMYYHCGKGGKEKRVWDKSPYPVDDTTPIVRRIYISDVVVREARAAAGFLYGLTE 346
Query: 390 APFANICLSNISLSI 404
P ++ SN+++ +
Sbjct: 347 MPIEDVVFSNVTVEM 361
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 188/375 (50%), Gaps = 23/375 (6%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V++ EFGA G+G +T AF+ AI + +GG ++VP+G + G+ +L S++TL++
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAI---EECEKQGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
E GAV+ SQ+ + +V Y R + Y LI +V V G GTIDGQG
Sbjct: 60 ESGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVG-FGTIDGQG 113
Query: 161 SVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
WW ++ L Y RP + F NV + + +N+P++ ++P+ C NV + N+ +
Sbjct: 114 EKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQN 173
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
P +SP T GI P+S V I +C I +G D ++LKSG ++ P ++ I ++
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMA 231
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN 340
G V GSEMSGG+ NV + + GI +T +GRGG + I +S+ + N+
Sbjct: 232 HGHG-GVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVM 290
Query: 341 VAFG-----ACGNCGSHPDD-DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQE 389
F CG G D P P + +I D++ A F G+ E
Sbjct: 291 CPFAFYMYYHCGKGGKEKRVWDKSPYPVDSTTPIVRRIYISDVVVREARAAAGFLYGLTE 350
Query: 390 APFANICLSNISLSI 404
P ++ SN+++ +
Sbjct: 351 MPIEDVVFSNVTVEM 365
>gi|302872741|ref|YP_003841377.1| polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
gi|302575600|gb|ADL43391.1| Polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
Length = 447
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 187/375 (49%), Gaps = 23/375 (6%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V++ EFGA G+G +T AF+ AI ++ GG ++VP+G + TG +L S++TL++
Sbjct: 3 VNVVEFGAKGNGIDKDTEAFKRAI---EACEKHGGGTIFVPAGIYHTGPIHLKSNMTLYI 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
E GAV+ SQ+ + +V Y R + Y LI +V V G GTIDGQG
Sbjct: 60 ENGAVLKFSQDIEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVG-FGTIDGQG 113
Query: 161 SVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
WW + L Y RP + F NV + + +N+P++ ++P+ C NV + N+ +
Sbjct: 114 EKWWRLHRDKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQN 173
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
P +SP T GI P+S V I +C I +G D ++LKSG ++ P ++ I ++
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIMA 231
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN 340
G V GSEMSGG+ NV + + GI +T +GRGG + I +S+ + N+
Sbjct: 232 HGHG-GVVIGSEMSGGVRNVVISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVM 290
Query: 341 VAFG-----ACGNCGSHPDD-DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQE 389
F CG G D P P + +I D++ A F G+ E
Sbjct: 291 CPFAFYMYYHCGKGGKEKKVWDKSPYPVDSTTPVVRRIYISDVVVREARAAAGFLYGLTE 350
Query: 390 APFANICLSNISLSI 404
P ++ SN+++ +
Sbjct: 351 MPIEDVVFSNVTVEM 365
>gi|222530340|ref|YP_002574222.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
gi|222457187|gb|ACM61449.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
Length = 447
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 186/374 (49%), Gaps = 23/374 (6%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++ FGA G+G +T AF+ AI + GG +YVP+G + G+ +L S++TL++E
Sbjct: 4 NVCNFGAKGNGVDKDTEAFKKAI---EVCEKNGGGTVYVPAGIYHIGALHLKSNMTLYIE 60
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GAV+ SQ+ + +V Y R + Y LI +V V G GTIDGQG
Sbjct: 61 SGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAEDAENVAVVG-FGTIDGQGE 114
Query: 162 VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
WW ++ L Y RP + F NV + + +N+P++ ++P+ C NV + NI + P
Sbjct: 115 KWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQNP 174
Query: 222 PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQS 281
+SP T GI P+S V I +C I +G D ++LKSG ++ P ++ I ++
Sbjct: 175 YDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIMAH 232
Query: 282 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINV 341
G V GSEMSGG+ NV + + GI +T +GRGG + I +S+ + N+
Sbjct: 233 GHG-GVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMC 291
Query: 342 AFG-----ACGNCGSHPDD-DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEA 390
F CG G D P D P + +I D++ A F G+ E
Sbjct: 292 PFAFYMYYHCGKGGKEKRVWDKSPYPVDDTTPVVRRIYISDVVVRQARAAAGFLYGLTEM 351
Query: 391 PFANICLSNISLSI 404
P ++ SN+++ +
Sbjct: 352 PIEDVVFSNVTVEM 365
>gi|393201099|ref|YP_006462941.1| endopolygalacturonase [Solibacillus silvestris StLB046]
gi|327440430|dbj|BAK16795.1| endopolygalacturonase [Solibacillus silvestris StLB046]
Length = 449
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/375 (33%), Positives = 194/375 (51%), Gaps = 23/375 (6%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I +FGAVGDG NT A + A+ ++ + GG +YVP+G ++TG+ + S++ L LE
Sbjct: 10 NIEQFGAVGDGWANNTSAIKRAV---EACSQGGGGTIYVPAGVFVTGAIEMKSNMHLHLE 66
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
G+ +L S + + + V+ R Y S I ++ +TG GT++GQG+
Sbjct: 67 AGSELLFSNDRADYPVIS-----SRWEGASRDVYMSCIYACHAENIAITG-FGTLNGQGA 120
Query: 162 VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
WW F SL Y RP+LV F E V + + +++P++ +HP C NV I +S+ P
Sbjct: 121 YWWKLFKEDSLAYPRPNLVSFDHCERVHIEQVKMIDSPSWTVHPNDCDNVTISGVSIVNP 180
Query: 222 PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQS 281
SP T GI P+S NV I DC I +G D I++K+G ++ A P ++ I +
Sbjct: 181 ANSPNTDGINPESCRNVKISDCSIDVGDDCIAIKAGTEDAERAI--PCENITITNCTMLH 238
Query: 282 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINV 341
G V FGSEMSG I NV V + GI F++ +GRGG I I +++ + N+
Sbjct: 239 GHG-GVVFGSEMSGDIRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNNIVMNNVIC 297
Query: 342 AF-----GACGNCGSHP---DDDFDP-DAL-PAIDQITFKDIIGTNITIAGNFT-GIQEA 390
F G G P D + P AL P I F +I T++T A F G+ E
Sbjct: 298 PFILNLYYYHGPRGMEPYVWDKEVQPVTALTPKFRHIHFSNITATDVTAAAGFMYGLPEM 357
Query: 391 PFANICLSNISLSIN 405
P +I S+I +++
Sbjct: 358 PVEDITFSHIRIAMK 372
>gi|312621274|ref|YP_004022887.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201741|gb|ADQ45068.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 447
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/374 (31%), Positives = 188/374 (50%), Gaps = 23/374 (6%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++ +FGA G+G +T AF+ AI + GG +YVP+G + G+ +L S++TL++E
Sbjct: 4 NVCDFGAKGNGVDKDTEAFKKAI---EVCEKNGGGTVYVPAGIYHVGALHLKSNMTLYIE 60
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GAV+ SQ+ + +V Y R + Y LI +V V G GTIDGQG
Sbjct: 61 SGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAEDAENVAVVG-FGTIDGQGE 114
Query: 162 VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
WW ++ L Y RP + F NV + + +N+P++ ++P+ C NV + NI + P
Sbjct: 115 KWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQNP 174
Query: 222 PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQS 281
+SP T GI P+S V I +C I +G D ++LKSG ++ P ++ I ++
Sbjct: 175 YDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIMAH 232
Query: 282 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINV 341
G V GSEMSGG+ NV + + GI +T +GRGG + I +S+ + N+
Sbjct: 233 GHG-GVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMC 291
Query: 342 AFG-----ACGNCGSHPDD-DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEA 390
F CG G D P ++ P + +I D++ A F G+ E
Sbjct: 292 PFAFYMYYHCGKGGKEKRVWDKSPYPVDESTPIVRRIYISDVVVREARAAAGFLYGLTEM 351
Query: 391 PFANICLSNISLSI 404
P ++ SN+++ +
Sbjct: 352 PIEDVVFSNVTVEM 365
>gi|109509136|gb|ABG34277.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 242
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 129/218 (59%), Gaps = 1/218 (0%)
Query: 227 TVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSS 286
T GI PDS NV IEDC I G D +++KSGWDEYGIA+G PT + IRR+ S ++
Sbjct: 1 TDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTQQLIIRRLTCISPYSAT 60
Query: 287 VAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC 346
+A GSEMSGGI +V+ E I ++ +GI +T GRG YI+ I + ++ + AF
Sbjct: 61 IALGSEMSGGIRDVRAEDIVAINTESGIRIKTAVGRGAYIKDIYVKKMTMHTMKWAFKMD 120
Query: 347 GNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINP 406
G+ SHPD+ +DP+ALP I I ++D++ N+++A F GI F IC++N++L +
Sbjct: 121 GDYKSHPDNKYDPNALPVIQNINYRDMVAENVSVAARFNGIAGDKFTGICMANVTLGMTA 180
Query: 407 GSYN-SWECSNIHGSSESVFPEPCPELENSSSNSSSTC 443
W C+++ G + V P PC L + S C
Sbjct: 181 KHKKYPWTCTDVQGMTSGVTPPPCDSLPDQGPEKISAC 218
>gi|116620373|ref|YP_822529.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223535|gb|ABJ82244.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 446
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 134/436 (30%), Positives = 202/436 (46%), Gaps = 43/436 (9%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
+ FGA GDGK +T A AI GG + V G++LTG+ L S++TL +E
Sbjct: 24 VKTFGAAGDGKKKDTAAIARAIDAAAK---AGGGTVVVSPGRYLTGALTLKSNVTLDVEA 80
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
GA +LGS +P + PL G + + Y SLI + + G GTIDGQG
Sbjct: 81 GATLLGSPDPEDY----PLRENVWGEK---KEYSSLIYADGAVHITIRG-RGTIDGQGQA 132
Query: 163 WWD---WFSSQS----------------LNYSRPHLVEFISSENVVVSNLTFLNAPAYNI 203
WW W + L Y RPH+++ + S++VV+ L +N+ ++ +
Sbjct: 133 WWKRMGWPDRRKIAPEQRTAAERAELAKLEYGRPHMIKLVRSKHVVIEGLHLINSASWTV 192
Query: 204 HPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGI 263
+P+ C V I I++ P SP T GI P+S NV I + I +G D ++LKSG DE G
Sbjct: 193 NPLLCEFVRIDGITIENPVPSPNTDGINPESCRNVQILNSRIDVGDDCVTLKSGKDEAGR 252
Query: 264 AYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG 323
GRP ++ I ++ G +V GSEMSGG+ NV V + GI ++ +GRG
Sbjct: 253 RVGRPDENITITNCVMLKGHG-AVTIGSEMSGGVRNVVVSNCVFQGTDVGIRVKSQRGRG 311
Query: 324 GYIRQIVISDAELYNINVAFGACG-NCGSHPDDDFDP--DALPAIDQITFKDIIGTNITI 380
G + V+S+ + ++ AF G+ D P + P + F +I
Sbjct: 312 GIVEGFVVSNVVMQDVASAFTLTSFYAGTDKPGDLFPVGEGTPRLRDFRFSNITARGSKT 371
Query: 381 AGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNS- 439
AG TG++E P NI + + + G I + + F + E + S
Sbjct: 372 AGQITGLKEMPIENITFTGVRIQAETG-------MKITNAKDVTFQDVIIEAAKGDAVSV 424
Query: 440 -SSTCFSLIRYYGRAS 454
S L R GRA+
Sbjct: 425 VDSVGIELGRLKGRAA 440
>gi|323453807|gb|EGB09678.1| hypothetical protein AURANDRAFT_2438, partial [Aureococcus
anophagefferens]
Length = 295
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 171/293 (58%), Gaps = 8/293 (2%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++S+ +GA DG T +T AF+ A+ + + A L P + L NLTSH TL
Sbjct: 8 TISVASYGARCDGATEDTAAFEAALAHAGAHAHT--TILVPPGARCLIAPINLTSHTTLR 65
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT--ID 157
+ A + G + + W ++ PSYG+G + PG RY SL++G + DV + G+ T +D
Sbjct: 66 IAANATVAGVADAARWPLIPGAPSYGQGRDHPGPRYTSLVHGEHVEDVTIQGEGPTSVLD 125
Query: 158 GQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNIS 217
G G WWD S+ +R HL+EF+ S+++ + +L+ ++P +N H VH++N+
Sbjct: 126 GNGQYWWD--QVHSMTVTRGHLIEFMYSKDIRIYDLSMRDSPFWNNHFYDSERVHVRNVH 183
Query: 218 VHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRV 277
+ A SP T G PDS+ +V +E G D +++KSGWD +G+AYG+P+ ++ IR V
Sbjct: 184 ISAKDNSPNTDGWDPDSARDVLVEHSTYVGGDDCVAIKSGWDCFGVAYGKPSRNITIRDV 243
Query: 278 LLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI-EFRTTKGRGGYIRQI 329
+ S + +A GSEMSGG+ +V V+++++ NGI +T RGGY+R +
Sbjct: 244 NC-TGSKAGIAIGSEMSGGVEDVLVQRVNILGKANGIAHVKTGPTRGGYVRNV 295
>gi|109509132|gb|ABG34275.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 238
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 128/213 (60%), Gaps = 1/213 (0%)
Query: 227 TVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSS 286
T G+ PDS N IED I G D +++KSGWDEYGI+YG PT + IRR+ S +
Sbjct: 1 TDGVDPDSCTNTRIEDVHIVSGDDCVAVKSGWDEYGISYGMPTKQLVIRRLTCISPYSAM 60
Query: 287 VAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC 346
+A GSEMSGGI +V+ E I ++ +GI +T GRGGY++ I + +++ + AF
Sbjct: 61 IALGSEMSGGIEDVRAEDITAINTESGIRIKTAMGRGGYVKDIYVRGMKMHTMKWAFWMD 120
Query: 347 GNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINP 406
GN GSHPD +DP A P I I ++DI+ N+T+ GI PF IC+SN ++++ P
Sbjct: 121 GNYGSHPDPHYDPKARPIITGINYRDIVAENVTMVAQLKGIPGNPFTGICISNATITMAP 180
Query: 407 GSYNS-WECSNIHGSSESVFPEPCPELENSSSN 438
S W CS+IHG + V P+PC L ++
Sbjct: 181 ESKKEPWTCSDIHGITSGVTPQPCGMLPAETTT 213
>gi|379727941|ref|YP_005320126.1| polygalacturonase [Melissococcus plutonius DAT561]
gi|376318844|dbj|BAL62631.1| polygalacturonase [Melissococcus plutonius DAT561]
Length = 442
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 193/378 (51%), Gaps = 24/378 (6%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+S+ +F + DG +L+T AF+ AI K +GG + VP G +LTG L S+L +
Sbjct: 6 ISLQDFSPIADGISLDTKAFEAAI---KVAERQGGGHIVVPPGTYLTGPIRLISNLVFEI 62
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+ GA +L + + + VD S G++ + Y I G L +V++TG +GT+DGQG
Sbjct: 63 QAGATLLFTDDVEQFPTVD---SRWEGVK--SKAYMPCIYGKNLTNVILTG-SGTLDGQG 116
Query: 161 SVWWDWF--SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISV 218
+ WW + + L Y RP+L+ F S + +S+L +P++ +HP+ C +V IQNIS+
Sbjct: 117 TNWWKLHRETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQNISI 176
Query: 219 HAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVL 278
P +SP T GI P+S N+ I +C I +G D I++KSG ++ + ++ I
Sbjct: 177 LNPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKS-ACENITISNCT 235
Query: 279 LQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYN 338
+ G +V GSEMSG I NV + + GI +T +GRGG + I +S + +
Sbjct: 236 MVHGHG-AVVLGSEMSGNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMED 294
Query: 339 INVAF--GACGNCGSHPDDDFDPDA--------LPAIDQITFKDIIGTNITIAGNFT-GI 387
+ F A CG + + D P I F +I+ + A F G+
Sbjct: 295 VLCPFVINAYYFCGPKGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAAAGFIYGL 354
Query: 388 QEAPFANICLSNISLSIN 405
E P ++ +NI + ++
Sbjct: 355 PEMPVQDVSFTNIQIEMD 372
>gi|413923569|gb|AFW63501.1| hypothetical protein ZEAMMB73_605801 [Zea mays]
Length = 313
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 164/324 (50%), Gaps = 42/324 (12%)
Query: 111 NPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ 170
+ +W ++ LPSYG G E G R+ SLI+G LRDVV+T
Sbjct: 7 DEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLRDVVITA------------------- 47
Query: 171 SLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGI 230
E+I ++ L P +IHP + + + I T+ +
Sbjct: 48 ---------FEYIIHVLNALALYQTLEVPV-DIHPFFYNILSI------------LTLAL 85
Query: 231 VPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFG 290
V DS +V IE+C I++G DAI++KSGWD+YGIAYGRP++D+ IR V +S + ++ G
Sbjct: 86 VTDSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARSLVSAGISIG 145
Query: 291 SEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCG 350
SEMSGG++NV VE + +++S G+ +T GRGGYIR I + N+ +
Sbjct: 146 SEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYN 205
Query: 351 SHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN 410
H DD +D A P I I+FK I G + + G P +I ++S+ I+ +
Sbjct: 206 EHADDGYDRTAFPDITSISFKGIHGQGVRVPVRAHGSDVIPIKDISFQDMSVGISYKKKH 265
Query: 411 SWECSNIHGSS-ESVFPEPCPELE 433
++CS + G VFP+PC L+
Sbjct: 266 IFQCSYLEGRVIRPVFPKPCENLD 289
>gi|126009432|gb|ABM30197.2| polygalacturonase [Brassica juncea]
Length = 278
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 137/199 (68%), Gaps = 1/199 (0%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RP S ++T+FGAVGDG T+NT AF+ A++ + + KGG QL VP G+WLT FNLTS +
Sbjct: 79 RPVSFNLTDFGAVGDGVTVNTEAFERAVYAISKLSKKGGGQLNVPPGRWLTAPFNLTSFM 138
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TLFL + A IL Q+ + W ++ PLPSYG G E G RY S I+G L+DVVVTG+NG++
Sbjct: 139 TLFLAEDAEILAVQDETLWPLLPPLPSYGYGREHYGPRYGSFIHGQNLKDVVVTGNNGSV 198
Query: 157 DGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
+GQG WW + S+ LN++R LV+ + S + V +N+T ++P + +HP C NV I N+
Sbjct: 199 NGQGVYWWKKYRSKLLNHTRGPLVQIMWSSDAVFANITLRDSPFWTLHPYDCKNVTITNM 258
Query: 217 SVHAPP-ESPYTVGIVPDS 234
++ AP E+P T GI PDS
Sbjct: 259 TILAPVFEAPNTDGIDPDS 277
>gi|333382495|ref|ZP_08474165.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828806|gb|EGK01498.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
Length = 545
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 203/432 (46%), Gaps = 77/432 (17%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ VSIT+FG + DG TLNT AF A + + ++KGG L+VPSG W TG S++ L
Sbjct: 49 NKVSITDFGGIPDGITLNTDAFAKA---MDALSNKGGGTLFVPSGVWYTGPIVFKSNINL 105
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LEKGA+IL S + + + +V+ + L RR +S I+G L ++ +TG+ G+I+G
Sbjct: 106 HLEKGALILFSADFNLYPLVNTVFE-----GLDTRRCQSPISGRNLENIAITGE-GSING 159
Query: 159 QGSVW------------WD--------------WFSSQS--------------------- 171
G W W WF S+
Sbjct: 160 SGEAWRPLKKSKVTEIHWKKVINSGGVVKDGNYWFPSKGSLKGLEISDMNVPRHDLTEAE 219
Query: 172 ----LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
++ RP +V FI +NV++ + F N+P++NIHP+ C NV + N+ V P +
Sbjct: 220 WMEIKDFLRPVMVSFIECKNVLLEGVLFENSPSWNIHPLMCENVILDNVMVRNPGYAQNG 279
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV 287
G+ +S N I + I +G DAI +KSG DE G RPT +V I + G V
Sbjct: 280 DGLDLESCKNSIIVNSIFDVGDDAICIKSGKDEDGRRRNRPTENVLIDNCKVFQGHGGFV 339
Query: 288 AFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-------N 340
GSEMSG + N+ V + G+ F++ +GRGG + I I D +++I +
Sbjct: 340 V-GSEMSGSVRNILVSNCQFLGTDVGLRFKSCRGRGGVVENIYIRDINMFDIATESFLFD 398
Query: 341 VAFGACGNCGSHPDDDFDP---------DALPAIDQITFKDIIGTNITIAGNFTGIQEAP 391
+ +G S D D P + PA I K+++ N A F G+ E
Sbjct: 399 LYYGGKSAVESLEDGDTIPVTSTILAVDETTPAFKNIYVKNLVSRNARRAMFFNGLPEMK 458
Query: 392 FANICLSNISLS 403
NI + +++++
Sbjct: 459 IENINVEDVTIT 470
>gi|196228361|ref|ZP_03127228.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
gi|196227764|gb|EDY22267.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
Length = 469
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 210/458 (45%), Gaps = 64/458 (13%)
Query: 6 ALLLLLALCSAILINGEVSDGQCDDQPTLDPRP-----HSVSITEFGAVGDGKTLNTLAF 60
A+ L AL SA L D ++PRP SVSI +FG GDGK LNT AF
Sbjct: 12 AVALATALLSAPL--------SAKDPVPIEPRPAVIPQRSVSILQFGGKGDGKALNTEAF 63
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ AI ++ A GG ++ VP G + TG L SH+ L +EKGA+I S S + + DP
Sbjct: 64 RAAI---QACAKAGGGRVVVPPGTFRTGPIELASHVALIVEKGAIIQASDRFSDFGLPDP 120
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW---------------- 164
LP+ + I+ + + LI+G L D+ + G+ G IDG GS WW
Sbjct: 121 LPATQQEIDGYKKLLRPLISGTKLDDIAIAGE-GIIDGAGSGWWAKSDKAAERAAAAAKA 179
Query: 165 ---------DWFSSQS---------LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
D S +S L RP L+ V + +T N+P ++ P
Sbjct: 180 GESASTKPADSTSPKSEKPAPPEKPLYVPRPFLITLRDCARVHLQGVTLRNSPMFHFVPH 239
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
+C +V ++++++ +P ++P T GI P +S +V I C I G D I++K G G+A
Sbjct: 240 HCHDVVVEDVTIFSPADAPNTDGIDPANSRDVLIRRCTIDTGDDNIAVKGG----GVA-N 294
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
PT +V + G V+ GSE G+ N V++ ++ + ++ + RGG +
Sbjct: 295 EPTENVTVTDCKFL--HGHGVSIGSETEAGVRNFLVQRCAFENTGTALRIKSDRTRGGVV 352
Query: 327 RQIVISDAELYNINVA-----FGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNIT-I 380
++ D + N+ A F +HP+ P + ITF+ I+ T
Sbjct: 353 ENVLYRDITMKNVETAITIFLFYDDKKAAAHPELAPVTKQTPMVRNITFQKIVCHGTTRK 412
Query: 381 AGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIH 418
AG G+ E+P +++ ++ + + + N+
Sbjct: 413 AGELVGLPESPISDVVFDDVHIDGAAAPFTQQDIHNLR 450
>gi|332685997|ref|YP_004455771.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
gi|332370006|dbj|BAK20962.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
Length = 442
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 192/378 (50%), Gaps = 24/378 (6%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+S+ +F + DG +L+T AF+ AI K +GG + P G +LTG L S+L +
Sbjct: 6 ISLQDFSPIADGISLDTKAFEAAI---KVAERQGGGHIVAPPGTYLTGPIRLISNLVFEI 62
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+ GA +L + + + +VD S G++ + Y I G L +V++TG +GT+DGQG
Sbjct: 63 QAGATLLFTDDVEQFPIVD---SRLEGVK--SKAYMPCIYGKNLTNVILTG-SGTLDGQG 116
Query: 161 SVWWDWF--SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISV 218
+ WW + + L Y RP+L+ F S + +S+L +P++ +HP+ C +V IQNIS+
Sbjct: 117 TNWWKLHRETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQNISI 176
Query: 219 HAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVL 278
P +SP T GI P+S N+ I +C I +G D I++KSG ++ + ++ I
Sbjct: 177 LNPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKS-ACENITISNCT 235
Query: 279 LQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYN 338
+ G +V GSEMS I NV + + GI +T +GRGG + I +S + +
Sbjct: 236 MVHGHG-AVVLGSEMSRNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMED 294
Query: 339 INVAF--GACGNCGSHPDDDFDPDA--------LPAIDQITFKDIIGTNITIAGNFT-GI 387
+ F A CG + + D P I F +I+ + A F G+
Sbjct: 295 VLCPFVINAYYFCGPKGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAAEGFIYGL 354
Query: 388 QEAPFANICLSNISLSIN 405
E P ++ +NI + ++
Sbjct: 355 PEMPVQDVSFTNIQIEMD 372
>gi|167762022|ref|ZP_02434149.1| hypothetical protein BACSTE_00368 [Bacteroides stercoris ATCC
43183]
gi|167700114|gb|EDS16693.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 516
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 148/488 (30%), Positives = 227/488 (46%), Gaps = 92/488 (18%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCD--------DQPTLD-PR--PHSVSITEFGAV 49
++M L ++ A+C I + + +D + + D P ++ PR +V++ EF AV
Sbjct: 9 LRMTKPLYVIAAVCLWIFSSCQSTDYKYEAVYRNLPFDMPRVEAPRFPDRTVNLKEFNAV 68
Query: 50 GDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGS 109
G+G+TL T AF +AI + +++GG L VP+G WLTG L S++ L LEKGAVIL S
Sbjct: 69 GNGETLCTSAFADAI---NALSEQGGGHLVVPAGVWLTGPIVLKSNIDLHLEKGAVILFS 125
Query: 110 QNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVW----- 163
+ VD P E L RR +S I+G L +V +TG+ G IDG G W
Sbjct: 126 PD------VDLYPLVETVFEGLDTRRCQSPISGRNLENVAITGE-GAIDGNGHYWRPLKR 178
Query: 164 -------WD--------------WFS---------------SQSL----------NYSRP 177
W WF Q+L ++ RP
Sbjct: 179 EKVTESVWKQTTARGGVYKRPTYWFPYPETLKGDTISNMNVPQNLKTEEEWQSVRHFLRP 238
Query: 178 HLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDN 237
+V I +NV + + F N+PA+N+HP+ C NV ++++ V P + G+ +S N
Sbjct: 239 VMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYAQNGDGLDLESCKN 298
Query: 238 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 297
I + +G D I LKSG DE G RP +V + + G V GSEMSGG+
Sbjct: 299 ALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGHGGFVV-GSEMSGGV 357
Query: 298 SNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-------NVAFGACGNCG 350
NV V + G+ F++ +GRGG + I I++ + +I N+ +G
Sbjct: 358 RNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSMMDIPTEPITFNLYYGGKSAVE 417
Query: 351 SHPDDDFDP---DALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSNI 400
+ P D LP +D+ T F++I N+ AG F GI E P N+ L ++
Sbjct: 418 VLESGEKVPAKVDPLP-VDETTPCFRNIHVKNLVCAGARRALFFNGIPEMPIENVVLEDV 476
Query: 401 SLSINPGS 408
++ G+
Sbjct: 477 DITSRLGA 484
>gi|373849855|ref|ZP_09592656.1| Polygalacturonase [Opitutaceae bacterium TAV5]
gi|372476020|gb|EHP36029.1| Polygalacturonase [Opitutaceae bacterium TAV5]
Length = 916
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 191/397 (48%), Gaps = 43/397 (10%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V I + GA G LNT A +AI ++ A +GG ++ VPSG WLTG+ + S + L
Sbjct: 18 RRVDIRDHGAHPGGALLNTRAIADAI---QACARQGGGRVVVPSGIWLTGAIHFRSRIDL 74
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LE GA + SQNP D + P+ S G+ + Y + + D+ +TG G ++G
Sbjct: 75 HLEAGAELRFSQNPD--DYLPPVLSQRGGVMI--YNYSPFLYAHRCEDISITG-AGLLNG 129
Query: 159 QGSVWWDWFSSQSLNYS--------------------------RPHLVEFISSENVVVSN 192
QG WW W SQ S RP + I + V++
Sbjct: 130 QGQSWWPWKHSQPGMSSIQGPDNFAALRTPLEERVFGTREAGVRPVFCQPIECKRVLIEG 189
Query: 193 LTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPY---TVGIVPDSSDNVCIEDCIIAMGH 249
+TF ++P++ + PV+C+++ +++ ++ PP SP+ T GI PD+ NV IE C++ G
Sbjct: 190 VTFRDSPSWTLQPVWCADLTLRHSTILNPP-SPFSHNTDGIDPDACRNVLIEHCVVDTGD 248
Query: 250 DAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYD 309
DAI +K+G DE G P ++ IR ++S G + GSEMS G+ N+
Sbjct: 249 DAICIKAGRDEDAWEAGIPCENILIRHCEIRSGHG-GITIGSEMSAGVRNLHAHDCTCDG 307
Query: 310 SLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC----GNCGSHPDDDFDPDALPAI 365
+ I +T GRGG+I+ I+I + I A G+ P D + +PA+
Sbjct: 308 TDTAIRIKTKPGRGGFIKDILIENITARRIRHAAVELTFHYGDTLEKPPDPKNLKHVPAV 367
Query: 366 DQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 402
+ I +++ + A + G+ P N+ L N+ +
Sbjct: 368 ENILIRNVRCDSAREALHLRGLPGHPLKNVTLQNLEI 404
>gi|448413184|ref|ZP_21577030.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
gi|445667365|gb|ELZ20009.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
Length = 515
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 130/392 (33%), Positives = 189/392 (48%), Gaps = 48/392 (12%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
+ +FGAVG G +T A Q+A L A GG + VPSGK+LTG + SH TL LE
Sbjct: 10 VRDFGAVGTGDERDTAALQSA---LDECAGTGGT-VVVPSGKYLTGPLTVGSHTTLELEA 65
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
GA + ++ + + S G E G + + +V +TG GT+DGQG
Sbjct: 66 GATLSFVRDHEAFPARE---SRWEGWEQTG--FHPCLLVAEAENVEITG-RGTVDGQGDY 119
Query: 163 WWDWF---------------------SSQSLNYS----RPHLVEFISSENVVVSNLTFLN 197
WW ++ + ++ + S RP L + S NV VS +T N
Sbjct: 120 WWQFYGVDDDELPASLADRLDSFHEANDKADDVSSFTLRPPLFQVDRSTNVSVSGITLRN 179
Query: 198 APAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSG 257
+P +N H VY NV + +++V P ++P GI DSS V I DC + G DA+ +KSG
Sbjct: 180 SPFWNTHVVYSDNVTLHDVNVENPADAPNGDGIDIDSSRYVRISDCYLNAGDDAVCIKSG 239
Query: 258 WDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFR 317
DE G GRP + + + +++ G V GSEMSG + +V V D+ GI +
Sbjct: 240 KDEEGRRIGRPASGITVTNCTVEAGHG-GVVIGSEMSGDVRDVTVSNCTFTDTDRGIRIK 298
Query: 318 TTKGRGGYIRQIVISDAELYNINVAFGACG---NCGSHPDDDFDP----DALPAIDQITF 370
T +GRGG V+ D N+ + AC N D D DP ++ P + I +
Sbjct: 299 TQRGRGG-----VVEDCRFDNLVMRRVACPFTINGYYFMDIDSDPIPVDESTPMVRNIAY 353
Query: 371 KDIIGTNITIAGNFTGIQEAPFANICLSNISL 402
DII ++ AG F G+ E F NI SN+ +
Sbjct: 354 SDIIARDVETAGFFAGLPEQRFENISFSNVEI 385
>gi|399889206|ref|ZP_10775083.1| glycoside hydrolase family protein [Clostridium arbusti SL206]
Length = 756
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 206/424 (48%), Gaps = 71/424 (16%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++ ++GAVGDG T ++ A Q+AI A G + +P+G + T L S +TL +E
Sbjct: 146 NVKDYGAVGDGVTKDSKAIQDAID-----ACTPGGVVVIPAGTYYTAPLKLKSDMTLNIE 200
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
KGA IL S++ S + ++D S G + Y S+I +++ + G+ GTIDG
Sbjct: 201 KGATILASRDVSDYKIID---SRWEGTSF--KSYMSIITAIDAKNLNIIGE-GTIDGNAG 254
Query: 162 -----------------------------------------------VWWD--WFSSQSL 172
+WWD + +
Sbjct: 255 PIKEAAAGETEDAYGYPVNKVNVSGEYDYNMGKYNGDKSTAVNFDMGLWWDNPKATDPTK 314
Query: 173 NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVH---APPESPYTVG 229
+RP ++ I+ + V++ + N+P++ IHP+Y N+ I +++V +P +SP T G
Sbjct: 315 QTARPRTIQLINCDGVLIQGVKVQNSPSWTIHPLYSKNITIADVNVKNPSSPVDSPNTDG 374
Query: 230 IVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAF 289
+ PDS DN+ + + +G D I++KSG D G G P++++ IR L+ G V
Sbjct: 375 LDPDSVDNLLVVNTTFDVGDDCIAIKSGKDAEGRKIGIPSSNITIRNSLMLHGHG-GVTL 433
Query: 290 GSEMSGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIRQIVISDAELYNINV-AFGACG 347
GSEMSGGI+N+ + K ++DS N G+ +T +GRGG I+ +V + + NI+ AF
Sbjct: 434 GSEMSGGINNINI-KDDIFDSTNIGVRLKTLRGRGGVIQDVVFDNIMMKNISSDAFNINS 492
Query: 348 NCGSH----PDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
N S+ P + P I + FK+I A F G+QE P + LSNI+++
Sbjct: 493 NYSSNGAPLPYTGVVDETTPTIKNLVFKNITAIGAKEASFFQGLQEMPVDGVTLSNINVT 552
Query: 404 INPG 407
+ G
Sbjct: 553 ADKG 556
>gi|311748289|ref|ZP_07722074.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
gi|126576785|gb|EAZ81033.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
Length = 557
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 138/433 (31%), Positives = 200/433 (46%), Gaps = 77/433 (17%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
SI E+GAVGDG T N+ AF+ AI + +++GG ++ VP G WLTG L ++ L LE
Sbjct: 52 SIMEYGAVGDGLTNNSQAFKAAI---EEVSNQGGGKVLVPRGIWLTGPITLLDNVNLHLE 108
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
G++I S+N + +V+ + G L R S IN Y + ++ +TG NGTIDG G
Sbjct: 109 DGSLITFSKNKDEYPLVE---TSFEG--LNTFRCLSPINAYRVENIAITG-NGTIDGSGE 162
Query: 162 VW------------WD-------------WFSSQSL------------------------ 172
W W+ WF SQS
Sbjct: 163 AWRAVKRSKMTDSQWNELVSSGGIVVGTNWFPSQSFLDGHNASSSFNVPDVTDRKELEKM 222
Query: 173 -NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIV 231
++ RP +V S+ V++ TF N+PA+NIHP+ +V I+N++V P S G+
Sbjct: 223 KDFLRPVMVSIRESKRVLLDGPTFQNSPAWNIHPLMSEDVIIRNLTVRNPWFSQNGDGLD 282
Query: 232 PDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGS 291
+S NV I + +G DAI KSG D G G PT +V ++ ++ G GS
Sbjct: 283 LESCKNVLIYNNTFDVGDDAICFKSGKDSDGRERGMPTENVIVKNNIVYHGHG-GFTVGS 341
Query: 292 EMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI---NVAFGA--C 346
EMSGGI NV V + G+ F++T+GRGG + I IS + NI + F
Sbjct: 342 EMSGGIKNVHVSNCTFMGTDVGLRFKSTRGRGGVVENIWISKINMINIPAEAIRFNMFYS 401
Query: 347 GNC-----GSHPDDDFDPDAL-------PAIDQITFKDIIGTNITIAGNFTGIQEAPFAN 394
GN + +D+ + L P+ I KDI T +A F G+ E N
Sbjct: 402 GNAPVLEEDQNAEDEARKEELAPVTEETPSFRNIFMKDIQVTGSGVAAFFMGLPEMKLQN 461
Query: 395 ICLSNISLSINPG 407
+ L N L+ G
Sbjct: 462 VKLENAVLNAEKG 474
>gi|225165583|ref|ZP_03727398.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
gi|224800169|gb|EEG18584.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
Length = 421
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 194/403 (48%), Gaps = 45/403 (11%)
Query: 32 PTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFN 91
P L P + ++ E GA G T AF NAI + A +GG L VP+G+WLTG
Sbjct: 10 PPLQIPPAATNLLEHGAQEGGIQSCTTAFANAI---DTLAAQGGGTLTVPAGRWLTGPIC 66
Query: 92 LTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG 151
L SH+ L LE GA ++ S+ H D P+ ++ G + + L+ + +TG
Sbjct: 67 LRSHIRLHLETGAHVVFSR--EHADYQPPVLAHRAGCWV--MNFHPLLYARDATHIAITG 122
Query: 152 DNGTIDGQGSVWWDWFSSQS-----------------------LNYSRPHLVEFISSENV 188
GT DGQG WW+W ++ + RP+++EFI+ +V
Sbjct: 123 -RGTFDGQGDAWWEWKKNEDGVRRLIDMVARRVPIAERIFGTVADCVRPNMLEFINCRDV 181
Query: 189 VVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMG 248
++ N+T ++PAY +HPV C NV ++ +S+ P GI P+ NV IEDC++ G
Sbjct: 182 LIENVTLRDSPAYLVHPVGCENVTLRGLSILG--NGPNNDGIDPEYCRNVLIEDCLVDTG 239
Query: 249 HDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY 308
D I LKSG D+ G A RPT +V +RR+ + G + GSE+S GI NV VE
Sbjct: 240 DDCICLKSGRDQDGWAENRPTENVIVRRIRTRRGHG-GIVLGSELSSGIRNVLVEDCDFS 298
Query: 309 DSLNGIEFRTTKGRGGYIRQI---------VISDAELYNINVAFGACGNCGSHPDDDFDP 359
+ GI ++ GRGG++ I +I +A + +++ A G GS +
Sbjct: 299 GTERGIRIKSAPGRGGFVENIHMRNIRMSDIIDEAIIIHMDYGSVAKGQVGSAFQSNTPS 358
Query: 360 DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 402
+ I +D+ + A + TG P +I L N+ L
Sbjct: 359 PT--RMRNILIEDVTCASAGKALDITGDAALPPESITLRNLRL 399
>gi|329956221|ref|ZP_08296901.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328524695|gb|EGF51756.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 506
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 139/450 (30%), Positives = 205/450 (45%), Gaps = 82/450 (18%)
Query: 30 DQPTLD-PR--PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWL 86
D P ++ PR +V++ EF AVG+G+TL T AF +AI + +++GG L VP+G WL
Sbjct: 36 DMPRVEAPRFPDRTVNLAEFNAVGNGETLCTSAFADAI---NTLSEQGGGHLVVPAGVWL 92
Query: 87 TGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLR 145
TG L S++ L LEKGAVIL S + VD P E L RR +S I+G L
Sbjct: 93 TGPIVLKSNIDLHLEKGAVILFSPD------VDLYPLVETVFEGLDTRRCQSPISGRNLE 146
Query: 146 DVVVTGDNGTIDGQGSVW------------WD--------------WFS----------- 168
+V +TG+ G IDG G W W WF
Sbjct: 147 NVAITGE-GAIDGNGHYWRPLKREKVTESVWKQTTARGGVYKRPTYWFPYPETLKGDTIS 205
Query: 169 ----SQSL----------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
Q+L ++ RP +V I +NV + + F N+PA+N+HP+ C NV ++
Sbjct: 206 NMNVPQNLQTEEEWQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVE 265
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
++ V P + G+ +S N I + +G D I LKSG DE G RP +V +
Sbjct: 266 DVQVRNPSYAQNGDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVV 325
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
+ G V GSEMSGG+ NV V + G+ F++ +GRGG + I I++
Sbjct: 326 DGCTVFKGHGGFVV-GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNV 384
Query: 335 ELYNI-------NVAFGACG-----NCGSHPDDDFDP----DALPAIDQITFKDIIGTNI 378
+ +I N+ +G G +P + P I K++I
Sbjct: 385 SMMDIPTEPITFNLYYGGKSAVEVLESGEKVPAKVEPLPVDETTPCFRNIHVKNLICAGA 444
Query: 379 TIAGNFTGIQEAPFANICLSNISLSINPGS 408
A F GI E P N+ L +I ++ G+
Sbjct: 445 RRALFFNGIPEMPIENVVLEDIDITSRLGA 474
>gi|325300479|ref|YP_004260396.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
gi|324320032|gb|ADY37923.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
Length = 493
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 136/447 (30%), Positives = 203/447 (45%), Gaps = 78/447 (17%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V++++FGAVGDG L T AF AI + + KGG +L VP+G W TG L S++ L
Sbjct: 48 NEVNLSDFGAVGDGTQLCTEAFARAI---DALSQKGGGRLTVPAGVWFTGPIVLKSNINL 104
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+EKGAVIL S + + +V+ + L RR +S I+G L +V +TG G IDG
Sbjct: 105 HVEKGAVILFSPDIDLYPLVETVFE-----GLDTRRCQSPISGRNLTNVAITG-QGAIDG 158
Query: 159 QGSVW------------WD--------------WFS---------------SQSLN---- 173
G W W WF Q+L
Sbjct: 159 NGHFWRPLKRQKVTESQWKAATSRGGVYKRADYWFPYPGTLKGDTISNMNVPQNLKTEEE 218
Query: 174 ------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
+ RP +V I +NV + + F N+PA+N+HP+ C NV I+N+ V P +
Sbjct: 219 WQSIRPFLRPVMVSLIECKNVWLEGVIFQNSPAWNLHPLMCENVLIENVEVRNPSYAQNG 278
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV 287
G+ +S N I + +G D I LKSG DE G RP +V + + G V
Sbjct: 279 DGLDLESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVIVDGCTVFKGHGGFV 338
Query: 288 AFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-------N 340
GSEMSGG+ NV V + G+ F++ +GRGG + I + + + +I N
Sbjct: 339 V-GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWVRNVSMIDIATEPVTFN 397
Query: 341 VAFGACGNCGSHPDDDFDPDALPA--IDQIT--FKDIIGTNITIAGN-----FTGIQEAP 391
+ +G + P +PA +D+ T F++I +T AG F GI E P
Sbjct: 398 LYYGGKSAVEVLESGEVVPAEVPAMPVDETTPCFRNIHIERLTCAGARRAMYFNGIPEMP 457
Query: 392 FANICLSNISLSINPGSYNSWECSNIH 418
I L ++ + + + C N+H
Sbjct: 458 IDGITLKHVRIRAREDAEFRY-CKNVH 483
>gi|338730196|ref|YP_004659588.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
gi|335364547|gb|AEH50492.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
Length = 515
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 196/389 (50%), Gaps = 26/389 (6%)
Query: 35 DPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTS 94
+P V + +FGA GDGKTL+T A Q AI +GG ++ P LT F L S
Sbjct: 76 EPESFVVDVRDFGAKGDGKTLDTFAVQAAIMS----CPEGGTVVFPPGTYLLTPVF-LKS 130
Query: 95 HLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRG-IEL------PGRRYKSLINGYMLRDV 147
+LT+ ++K AV+LG + + ++ L S G I L P + SL+ G + +V
Sbjct: 131 NLTIEIQKDAVLLGVSERTLYPILPGLLSSKLGEIYLSSWEGEPAESFASLVTGIGVENV 190
Query: 148 VVTGDNGTIDGQGSVWWDWFSSQSLNYS-RPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
+ G G ID + WF+ + + RP + +N+++ +T N+P++ +HP+
Sbjct: 191 RIIG-QGVIDANANFDDWWFNPKVKRIAWRPRSIFLNRCKNILIEGITIRNSPSWTVHPL 249
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
+C ++ + +++ P SP T GI P+S NV I C I++G D +++K+G E +
Sbjct: 250 FCKDLKLLTLNIVNPKNSPNTDGINPESCSNVLIAGCRISVGDDCVAVKAGKYEVKQKFD 309
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
P+ ++ IR L++ G +V GSEMS G+ NV+V ++ G+ +T + RGGY+
Sbjct: 310 VPSENIEIRNCLMEHGHG-AVVIGSEMSCGVRNVKVSNCLFVNTDRGLRIKTRRERGGYV 368
Query: 327 RQIVISDAELYNINV--AFGACGNCGSHPDDDFDPDAL--------PAIDQITFKDIIGT 376
+I + + ++ + V A NCG+ D + D + P I I K+++
Sbjct: 369 DEIELKNVQMNGVFVPLAINCFYNCGADYDPLYSSDKVVADVNERTPTIGSIVMKNVLCE 428
Query: 377 NITIAGNFT-GIQEAPFANICLSNISLSI 404
++ F G+ E I + N+ + I
Sbjct: 429 DVKSMAAFVYGLPEKKIEKIYMENVRIEI 457
>gi|395212459|ref|ZP_10399800.1| glycoside hydrolase [Pontibacter sp. BAB1700]
gi|394457168|gb|EJF11353.1| glycoside hydrolase [Pontibacter sp. BAB1700]
Length = 582
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 205/442 (46%), Gaps = 89/442 (20%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+SVSIT+FGAV DG T +T AF+ AI KGG ++ VP G WLTG L S++ L
Sbjct: 72 YSVSITDFGAVSDGLTKSTAAFEKAI---ADVVAKGGGKVIVPRGMWLTGPIVLKSNINL 128
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTID 157
+E GA++L S++ D P E L R +S I+G L +V +TG G ID
Sbjct: 129 HVEDGALVLFSKD------FDDYPLVKTSFEGLNTFRCQSPISGRDLENVAITG-KGVID 181
Query: 158 GQGSVW------------WD---------------WFSSQS------------------- 171
G G W W W+ ++S
Sbjct: 182 GNGDAWRPVKKGKMTESQWKTLLKSGGVLSDDGKIWYPTESSKRGAVTGNFNVPLDLTEK 241
Query: 172 ------LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
++ RP +V I+ + V++ TF N+PA+NIHP+ C +V I+N++V P S
Sbjct: 242 EQFEPIKDFMRPVMVSLINCKKVLLDGPTFQNSPAWNIHPLMCEDVTIRNLTVRNPWYSQ 301
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
G+ +S N I + +G DAI +KSG D++G G PT +V ++ ++ G
Sbjct: 302 NGDGLDLESCKNSVIYNNTFDVGDDAICIKSGKDQHGRDRGIPTENVIVKNNVVYHGHGG 361
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI------ 339
V GSEMS G+ NV V + G+ F++T+GRGG + I IS+ ++ NI
Sbjct: 362 FVV-GSEMSSGVKNVHVSNCTFIGTDIGLRFKSTRGRGGVVENIYISNIDMINIPTQAIS 420
Query: 340 -NVAFGACGNCGSHPDDDF-------DPDALPAIDQI-TFKDIIGTNITIAG-----NFT 385
N+ +G G+ P D + +P ++ +FKDI NI +AG
Sbjct: 421 FNLFYG-----GNSPTMDAEQGGAKKEEKLMPVTEETPSFKDIYMKNIRVAGADEALALQ 475
Query: 386 GIQEAPFANICLSNISLSINPG 407
G+ E N+ + N L G
Sbjct: 476 GLPEMNLQNVNIENAVLKAKKG 497
>gi|391227888|ref|ZP_10264095.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391223381|gb|EIQ01801.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 916
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 186/396 (46%), Gaps = 41/396 (10%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V I + GA G LNT A AI ++ A +GG + VP G WLTG+ + S + L
Sbjct: 18 RRVDIRDHGARPGGALLNTRAIAEAI---QACARQGGGHVVVPPGIWLTGAIHFRSRIDL 74
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LE GA + SQNP D + + S G+ + Y + + D+ +TG G ++G
Sbjct: 75 HLEAGAELRFSQNPD--DYLPAVLSQRGGVMI--YNYSPFLYAHRCEDISITG-AGLLNG 129
Query: 159 QGSVWWDWFSSQSLNYS--------------------------RPHLVEFISSENVVVSN 192
QG WW W SQ S RP + I + V++
Sbjct: 130 QGQSWWPWKHSQPGMSSIQGPDNFAALRTPLEERVFGTREAGVRPVFCQPIECKRVLIEG 189
Query: 193 LTFLNAPAYNIHPVYCSNVHIQNISVHAPPE--SPYTVGIVPDSSDNVCIEDCIIAMGHD 250
+TF ++P++ + PV+CS++ I++ ++ PP S T GI PD+ NV IE C++ G D
Sbjct: 190 VTFRDSPSWTLQPVWCSDLIIRHSTILNPPSLFSHNTDGIDPDACRNVLIEHCVVDTGDD 249
Query: 251 AISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
AI +K+G DE G P+ ++ IR ++S G + GSEMS G+ N+ +
Sbjct: 250 AICIKAGRDEDAWEAGIPSENILIRHCEIRSGHG-GITIGSEMSAGVRNLHAHDCTCDGT 308
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC----GNCGSHPDDDFDPDALPAID 366
I +T GRGG+I+ I+I + I A G+ P D + +PA++
Sbjct: 309 DTAIRIKTKPGRGGFIKDILIENITARRIRHAAVELTFHYGDTLEKPPDPKNLKHVPAVE 368
Query: 367 QITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 402
I +++ + A + G+ P N+ L N+ +
Sbjct: 369 NILIRNVRCDSAREALHLRGLPGHPLKNVTLQNLEI 404
>gi|224537997|ref|ZP_03678536.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520403|gb|EEF89508.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
Length = 452
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 197/443 (44%), Gaps = 67/443 (15%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
MK + L L LC+ ++ R V + + GA DGKTLNT
Sbjct: 3 MKYRILLCSLFCLCAVTVL-----------------RAERVDMLKAGAKVDGKTLNTKLI 45
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ I L + GG L+ P+G +LTGS + SH+TL LE GA +L S S D +
Sbjct: 46 NSTIDRLNA---NGGGTLFFPAGTYLTGSIRMKSHITLELEAGATLLFSD--SFDDYLPF 100
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW---------------- 164
+ G+ + + ++ LI ++ + G+ GT+DGQG WW
Sbjct: 101 VEVRHEGVMM--KSFQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLRDNGMR 157
Query: 165 ------------------------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
D+ + + RP ++ + ++V + + +N+P
Sbjct: 158 NVNKYQTMWDQANDTTAIYAETNKDYIGTLQRRFFRPPFIQPVRCKDVKIEGVKIVNSPF 217
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+ ++P +C NV ++ +++H P SP T GI P+S NV I DC I++G D I++KSG D
Sbjct: 218 WTVNPEFCENVKVKGVTIHNVP-SPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDA 276
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G G P ++ I ++ S G V GSEMSGG+ V + + GI ++T+
Sbjct: 277 QGRRLGVPCENITITNCIMLSGHG-GVVIGSEMSGGVRKVTISNCIFDGTDRGIRLKSTR 335
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI 380
GRGG + I +S+ + NI S + + P I + T++
Sbjct: 336 GRGGVVEDIRVSNIVMRNIKQEAVVLNLKYSGMPAEPKSERTPLFRNIHISGMTVTDVKT 395
Query: 381 AGNFTGIQEAPFANICLSNISLS 403
G++EAP + I L +I +
Sbjct: 396 PVKIVGLEEAPISEIVLRDIHVQ 418
>gi|431798423|ref|YP_007225327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789188|gb|AGA79317.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 565
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/444 (31%), Positives = 200/444 (45%), Gaps = 91/444 (20%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
H V+IT +GAVG+G NT AF AI A GG ++ VP G WLTG L S++ L
Sbjct: 53 HEVNITAYGAVGNGIEKNTAAFAKAI---DEVAQAGGGRVIVPRGIWLTGPVTLQSNINL 109
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTID 157
LE+GA++L S++ D P E L R S IN + ++ +TG G ID
Sbjct: 110 HLEEGALVLFSRD------FDDYPLVKTSFEGLNTVRCTSPINAFEAENIAITG-KGVID 162
Query: 158 GQGSVW------------WD---------------WF----------SSQSLN------- 173
G G W WD WF SS + N
Sbjct: 163 GNGDAWRPVKKGKMTPGQWDKLVKSGGVLSDDEKMWFPTANSKKGYTSSSNFNVPDLISD 222
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP +V + V++ TF N+PA+NIHP+ NV I+N++V P S
Sbjct: 223 DELASVKDFLRPVMVSLVKCNKVLLDGPTFQNSPAWNIHPLMSENVVIRNLNVRNPWYSQ 282
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
G+ +S N + + +G DAI KSG ++ G G PT +V ++ + + G
Sbjct: 283 NGDGLDLESCKNALVYNNTFDVGDDAICFKSGKNQDGRDRGMPTENVIVKNNTVYHAHGG 342
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI------ 339
V GSEMSGG+ NV V + G+ F++T+GRGG + I ISD ++ NI
Sbjct: 343 FVV-GSEMSGGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIHISDIDMINIPTDAIR 401
Query: 340 -NVAFGACGNCGSHPDDDFDPDA---------LPAIDQI-TFKDIIGTNITIAGN----- 383
N+ +G G+ P + D DA +P ++ FKDI NIT G+
Sbjct: 402 FNMFYG-----GNSPVLEEDQDAEDEARDETIVPVTEETPAFKDIYMKNITATGSGTAAF 456
Query: 384 FTGIQEAPFANICLSNISLSINPG 407
F G+ E N+ L N L G
Sbjct: 457 FMGLPEKSLENVRLENALLEAKNG 480
>gi|337746270|ref|YP_004640432.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
gi|336297459|gb|AEI40562.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
Length = 475
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 201/419 (47%), Gaps = 52/419 (12%)
Query: 16 AILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGG 75
A+ +GE+S + P+ ITEFGAV DG+T+NT A Q AI A G
Sbjct: 33 AVFQSGEISQPSAVIKAATRPQADRFEITEFGAVADGQTINTEAIQAAID-----ACTAG 87
Query: 76 AQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRR- 134
++ VP G ++TG+ L S +TL++E+G V+LGS NP + P+ Y GR
Sbjct: 88 GKVVVPKGTFVTGAIFLKSRMTLYIEQGGVLLGSDNPDDY----PVMQY----RWEGREQ 139
Query: 135 --YKSLINGY-----MLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSEN 187
Y SLIN L +++ G+ G ID G + ++ + R V + +
Sbjct: 140 LCYASLINTKDPAEGRLEQIIIEGE-GKIDANGMALFHKEMAEKKGF-RGRAVCLRNVDG 197
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTV--------GIVPDSSDNVC 239
V + ++T +PA+ +H +YC+ V + +I +H + G+ PDS+ +V
Sbjct: 198 VYLKDITVRQSPAWCVHLIYCNGVSVNHIEIHTKKDEQGRRYEHIFNGDGLNPDSTSDVY 257
Query: 240 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 299
I + +IA D I++KSG +E G G P+ ++ I + SG VA GSEMSGG+ N
Sbjct: 258 IFNSMIASQDDCIAIKSGRNEEGRRVGIPSQNIRISNCTFK--SGFGVATGSEMSGGVRN 315
Query: 300 VQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC---------GNCG 350
V++ D + + +GRG I + + D L N ++ C
Sbjct: 316 VRISDCRFEDVYSIATIKAPRGRGAVIENVTVEDCTLTNYSLEHEDCRWFRGAINIDQFY 375
Query: 351 SHPDDDFDPDALPAIDQIT--FKDIIGTNITI---AGN---FTGIQEAPFANICLSNIS 401
SH DFD D + +D+ T ++I NI + AGN G+ E+P NI L N++
Sbjct: 376 SHA--DFDADKVEEVDEGTSVIRNIHLKNIVLDTHAGNAVFMAGLPESPLQNIRLENVN 432
>gi|365122251|ref|ZP_09339156.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642965|gb|EHL82299.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
Length = 561
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 207/450 (46%), Gaps = 86/450 (19%)
Query: 34 LDP--RP----HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLT 87
+DP RP + V+IT+FG VGDG TLN+ AF AI ++ KGG L +P G W T
Sbjct: 42 MDPVQRPVFPDYKVTITQFGGVGDGTTLNSEAFAKAI---EALEKKGGGTLVIPQGIWYT 98
Query: 88 GSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRD 146
G L S++ ++L+ GA+IL S D D P E L RR +S I+ +
Sbjct: 99 GPIVLKSNIHIYLQGGAIILFS------DDFDLYPIVHTSFEGLDTRRCQSPISAKGAVN 152
Query: 147 VVVTGDNGTIDGQGSVW------------WD---------------WFSS---------- 169
+ +TG GTIDG G W W W+ S
Sbjct: 153 IAITG-KGTIDGNGDAWRPVKKSKLTASQWKALLQKGGVLNDKKDIWYPSAKSKLGNERS 211
Query: 170 ---------------QSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
+ ++ RP L+ FI NV++ +TF N+P++N+HP+ C NV I+
Sbjct: 212 DMNVPRGLKTDEEWEEVKDFLRPVLLSFIDCTNVLLQGVTFQNSPSWNLHPLMCENVTIE 271
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
N++V P S G+ +S N + +C +G D I +KSG D G G P +V +
Sbjct: 272 NLTVRNPWYSQNGDGLDIESCKNTIVTNCSFDVGDDGICIKSGKDADGRKRGIPCENVIV 331
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVI--- 331
++ G V GSEMSGG+ N+ V + G+ F++T+GRGG + I I
Sbjct: 332 DNCVVYHGHGGFVV-GSEMSGGVKNISVSNCQFLGTDVGLRFKSTRGRGGVVENIFIKNI 390
Query: 332 ------SDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITIAGN 383
+DA L+++ + + D+ + +PA+ + T F++I + + G
Sbjct: 391 DMINIPTDALLFDLYYGGKSASEVLADGDEVKEESNIPAVTEETPAFRNITISRVNCQGA 450
Query: 384 -----FTGIQEAPFANICLSNISLSINPGS 408
F G+ E N+ +S+ +++ G+
Sbjct: 451 RRAMYFNGLPEMNVQNVTVSDCNITAQLGA 480
>gi|189459631|ref|ZP_03008416.1| hypothetical protein BACCOP_00257 [Bacteroides coprocola DSM 17136]
gi|189433713|gb|EDV02698.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 535
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 205/432 (47%), Gaps = 77/432 (17%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+S SITEFGAV DG TLNT AF AI K+ A+KGG ++ VP+G WLTG L S++ L
Sbjct: 57 YSRSITEFGAVADGITLNTEAFDKAI---KAVAEKGGGKVIVPAGLWLTGPIVLQSNINL 113
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+LE+ A++L + + + + +V + G+E RR +S I+ ++ +TG G +DG
Sbjct: 114 YLEENALVLFTADHTQYPIV---KTSFEGLET--RRCQSPISALNAENLAITG-KGVMDG 167
Query: 159 QGSVW------------WD---------------WFSSQS-------------------- 171
G W W W+ S+
Sbjct: 168 NGDTWRPVKKGKMTANQWKKLVDSGGVLDESGRIWYPSEGSIKGAMACKNFNVPEGINTD 227
Query: 172 ------LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
++ RP L+ FI + V++ +TF N+P++ +HP+ C ++ I NISV P S
Sbjct: 228 EEWNSIRDWLRPVLLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDITINNISVSNPWYSQ 287
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
+ +S + I++ G D I +KSG DE G G P +V IR ++ G
Sbjct: 288 NGDALDLESCNRALIQNSSFDAGDDGICIKSGKDEDGRRRGEPCQNVIIRNNVVLHGHGG 347
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ V+ + G+ F++T+GRGG + ++ E
Sbjct: 348 FVV-GSEMSGGVKNIYVDNCTFLGTDVGLRFKSTRGRGGVVENIHINNINMINIPNEGLI 406
Query: 339 INVAFGAC----GNCGSHPDDDFDP---DALPAIDQITFKDIIGTNITIAGNFTGIQEAP 391
++ +G G+ ++P + P + PA I K++ N+ A F G+ E P
Sbjct: 407 FDLFYGGKAPGEGDGYNNPTEQKIPAVTEETPAFRDIFIKNVTAKNVGRAILFNGLPEMP 466
Query: 392 FANICLSNISLS 403
NI + N+++S
Sbjct: 467 IKNIHIENVTMS 478
>gi|289578915|ref|YP_003477542.1| glycoside hydrolase family protein [Thermoanaerobacter italicus
Ab9]
gi|289528628|gb|ADD02980.1| glycoside hydrolase family 28 [Thermoanaerobacter italicus Ab9]
Length = 519
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 188/382 (49%), Gaps = 30/382 (7%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V++ +FGA GDGKT++T Q AI+ G +++ P G +LTG L S++TL L
Sbjct: 85 VNVRDFGAKGDGKTIDTSFIQAAIYSCPE-----GGRVFFPGGIYLTGPIFLKSNITLEL 139
Query: 101 EKGAVILGSQNPSHWDVV-DPLPSYGRGIEL--------PGRRYKSLINGYMLRDVVVTG 151
K AV+LG+ + + + ++ + + S EL + SLI G + +V + G
Sbjct: 140 SKDAVLLGANDRNLYPILPNTIKSQNSDEELYLATWEGEAAECFASLITGINIENVNIIG 199
Query: 152 DNGTIDGQGS--VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
+ GTIDG + WW + + RP V +N+++ LT N+PA+ IHP
Sbjct: 200 E-GTIDGNANFETWWKEHKIKKGAW-RPRTVFLNQCKNILIEGLTIKNSPAWTIHPFQSE 257
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
N+ N+++ P SP T G+ P++S NV I C ++G D I++KSG + G+ T
Sbjct: 258 NLKFINLTIENPQNSPNTDGLNPEASKNVLILGCKFSVGDDCIAIKSGKFDMAQKLGKLT 317
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQI 329
V +R ++ G V GSEMSGG+ V VEK ++ GI +T +GRGG+I +I
Sbjct: 318 EKVFVRNCYMEYGHG-GVVIGSEMSGGVKEVYVEKCIFNNTDRGIRIKTRRGRGGFIDEI 376
Query: 330 VISDAELYNINVAF--GACGNCGSHPDDDF--DPDALPA------IDQITFKDIIGTNIT 379
+ + F + C S ++ + LP I I KDI TN
Sbjct: 377 HADKIRMNRVKTPFTINSFYFCDSDGKTEYVWSKEKLPIDKRTPYIGNIYLKDIGCTNTQ 436
Query: 380 IAGNFT-GIQEAPFANICLSNI 400
+A F G+ E + + NI
Sbjct: 437 VAAGFMYGLPERKIEKVIMENI 458
>gi|413920258|gb|AFW60190.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 163
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 114/158 (72%), Gaps = 2/158 (1%)
Query: 293 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSH 352
MSGGIS++ V + ++DS GI F+T+ GRGGYI +VIS+ ++ N++V GNC +H
Sbjct: 1 MSGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQMENVHVGIEFTGNCSTH 60
Query: 353 PDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGS-YNS 411
PDD FDP LPAID +T K++ GTNI++AG +GI+ APF ICLSN++ S+ GS +S
Sbjct: 61 PDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAICLSNLNFSMAAGSGPSS 120
Query: 412 WECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRY 449
W CS++ G SE+VFPEPC EL + SS SSS C+SL Y
Sbjct: 121 WSCSDVSGYSEAVFPEPCTELRDPSS-SSSVCYSLASY 157
>gi|427384333|ref|ZP_18880838.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
gi|425727594|gb|EKU90453.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
Length = 506
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 199/439 (45%), Gaps = 81/439 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V++ +FGAVG+G+ L T AF AI + A+KGG L VP+G W TG L S++ L
Sbjct: 48 RKVNLADFGAVGNGEELCTEAFAKAI---DALAEKGGGHLIVPAGVWFTGPIVLKSNIDL 104
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTID 157
LEKGA+IL S N VD P E L RR +S ++G L +V +TG+ G ID
Sbjct: 105 HLEKGAIILFSPN------VDLYPLVETVFEGLDTRRCQSPVSGRNLENVAITGE-GAID 157
Query: 158 GQGSVW------------WD--------------WFS-SQSL------------------ 172
G G W W WF Q+L
Sbjct: 158 GNGHYWRPLKREKVTESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKSEE 217
Query: 173 ------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPY 226
++ RP +V I +NV + + F N+PA+N+HP+ C NV I+ + V P +
Sbjct: 218 EWQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQN 277
Query: 227 TVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSS 286
G+ +S N I + +G D I LKSG DE G GR +V + + G
Sbjct: 278 GDGLDLESCKNTLIVNSTFDVGDDGICLKSGKDEDGRIRGRVCENVVVDGCTVFKGHGGF 337
Query: 287 VAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI------- 339
V GSEMSGG+ NV V + G+ F++ +GRGG + I I + + +I
Sbjct: 338 VV-GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISMIDIPTEPITF 396
Query: 340 NVAFGACGNCGSHPDDDFDP---DALPAIDQIT--FKDIIGTNITIAGN-----FTGIQE 389
N+ +G + P + +P +D+ T F++I N+ AG F GI E
Sbjct: 397 NLYYGGKSAVEVLESGEVVPAKVEPMP-VDETTPCFRNIHVENLVCAGARRALFFNGIPE 455
Query: 390 APFANICLSNISLSINPGS 408
P I L N+ +S G+
Sbjct: 456 MPIDGITLKNVDISSKLGA 474
>gi|325106070|ref|YP_004275724.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974918|gb|ADY53902.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 552
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 136/474 (28%), Positives = 220/474 (46%), Gaps = 76/474 (16%)
Query: 1 MKMPVALLLLLALCS--AILINGEVSDGQCDDQPTL-DP--RPHSVSITEFGAVGDGKTL 55
MK + + + LCS A+ ++ + S+ D+ P + +P + + +IT +GA DG +L
Sbjct: 1 MKKNIQGKIFIVLCSFFAVQVHAQQSNYSWDNLPVVAEPTFKKDTFNITNYGAKPDGISL 60
Query: 56 NTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHW 115
NT A AI + KGG + VP+G WLTG L +++ L L+K A++ S+N +
Sbjct: 61 NTDAINKAI---SDCSKKGGGVVLVPNGYWLTGPIKLQNNVNLHLKKNALLQFSKNFDDY 117
Query: 116 DVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVW------------ 163
+V+ + G+ P R +S I G + +V +TG G IDG G W
Sbjct: 118 KLVEGVYE-GK----PSARNESPIMGVNVSNVAITGQ-GIIDGNGDAWRMVRTSDLTEYE 171
Query: 164 WD----------------WFSSQS-------------------------LNYSRPHLVEF 182
W W+ S+ ++ RP+L+
Sbjct: 172 WKAKIAKGEGILSEDKKRWYPSEKNKRGHDQNISFWLGPGVKLSDFEPVKDFLRPNLIVL 231
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
+ +NV++ +TF N+PA+N+HP+ C N+ ++ + + P + G +S NV +E
Sbjct: 232 NNCKNVLLEGVTFQNSPAWNVHPIMCENLTLRGLFIKNPDYAHNGDGADIESCKNVLVEH 291
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQV 302
CI +G DAI +KSG DE G G T +V IR + G V GSEMSGG N+ V
Sbjct: 292 CIFDVGDDAICIKSGKDEEGRKRGIATENVIIRNNTVYKGHGGFVV-GSEMSGGAKNIFV 350
Query: 303 EKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN--VAFGACGNCGSHPDDDFDPD 360
+ GI F+T++GRGG + I I D +++I+ F P + +
Sbjct: 351 YDCTFMGTDKGIRFKTSRGRGGVVENIFIKDINMFDIDQEAIFFDMYYWVKSPKANEAVE 410
Query: 361 ALPAIDQI-TFKDIIGTNITIAGN-----FTGIQEAPFANICLSNISLSINPGS 408
P ++ F+++ NIT G GI E P NI + N+ L+ + G+
Sbjct: 411 IPPVTEETPIFRNVYIENITCNGAKKGIFVRGIPEMPVNNIHMKNLVLNTDIGA 464
>gi|390944044|ref|YP_006407805.1| endopolygalacturonase [Belliella baltica DSM 15883]
gi|390417472|gb|AFL85050.1| endopolygalacturonase [Belliella baltica DSM 15883]
Length = 570
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 202/440 (45%), Gaps = 85/440 (19%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++SI E GAV DG T NT AF AI + A KGG ++ VP G WLTG S++ L
Sbjct: 59 TLSILEHGAVSDGVTKNTEAFAKAI---DAVASKGGGKVLVPRGIWLTGPIQFKSNINLH 115
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LE GA+IL S++ D P E L R S I + ++ +TG GT+DG
Sbjct: 116 LEAGALILFSKD------FDDYPLIETSFEGLNTVRCISPIYADGVENIAITG-TGTLDG 168
Query: 159 QGSVW------------WD---------------WFSSQS-------------------- 171
G W W WF S+S
Sbjct: 169 NGDAWRPVKKSKMTSSQWKSLLASGGLLNEKGDMWFPSESSIKGYQASSNFNVPDLIDPS 228
Query: 172 -----LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPY 226
++ RP +V +S+ +++ TF N+PA+NIHP+ ++ I+N++V P S
Sbjct: 229 ELETVKDFLRPVMVSIKNSKRILLDGPTFQNSPAWNIHPLMSEDIIIRNLNVRNPWYSQN 288
Query: 227 TVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSS 286
G+ +S NV I D I +G DAI KSG D+ G G PT +V ++ ++ G
Sbjct: 289 GDGLDLESCKNVLIYDNIFDVGDDAICFKSGKDQDGRDRGMPTENVVVKNNIVYHGHGGF 348
Query: 287 VAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI------- 339
V GSEMSGG+ NV + + G+ F++T+GRGG + I IS+ ++ NI
Sbjct: 349 V-IGSEMSGGVRNVHISDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDMINIPTDVINF 407
Query: 340 NVAFGACGNC------GSHPDDDFDPDALPAIDQI-TFKDIIGTNIT-----IAGNFTGI 387
N+ +G GN S D+ D A+P + +FK+I NI +A NF G+
Sbjct: 408 NLFYG--GNSPVLEADQSAEDEARDEVAVPVSETTPSFKNIFMKNIKATGSGVAANFQGL 465
Query: 388 QEAPFANICLSNISLSINPG 407
E N+ L + L G
Sbjct: 466 PEMNLQNVSLEDSFLEAKKG 485
>gi|308069843|ref|YP_003871448.1| polygalacturonase [Paenibacillus polymyxa E681]
gi|305859122|gb|ADM70910.1| Polygalacturonase (Pectinase) (PGL) [Paenibacillus polymyxa E681]
Length = 453
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/376 (31%), Positives = 190/376 (50%), Gaps = 25/376 (6%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I ++GAV DG TLA +++ ++ GG ++VPSG +LTG+ L S++ L +
Sbjct: 5 NIVDYGAVQDG---TTLATGAIASAIEAASNAGGGTVFVPSGTYLTGAIFLKSNIELHVS 61
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GA + S + + VV+ S G++ + S I G L ++ VTG +GT+DG G
Sbjct: 62 PGATLSFSTELADYPVVE---SRWEGVQR--EVHASCIYGENLENISVTG-SGTLDGNGQ 115
Query: 162 VWWDWFSS--QSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVH 219
WW + + L Y RP L+ F + V + ++ N+P++ ++P+ C NV I N+S+
Sbjct: 116 PWWQKHRNHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSIL 175
Query: 220 APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLL 279
P +SP T GI P+S NV I +C I +G D I++K+G ++ P ++ I +
Sbjct: 176 NPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCTM 233
Query: 280 QSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI 339
G +V GSEMSG I NV + + GI ++ +GRGG I I +S+ + ++
Sbjct: 234 VHGHG-AVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGTIEDIRVSNIVMEDV 292
Query: 340 NVAF--GACGNCGSHPDD----DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQ 388
F CG D D +P D P +I F DI + A F G+
Sbjct: 293 ICPFILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLA 352
Query: 389 EAPFANICLSNISLSI 404
E A I SNI +S+
Sbjct: 353 EQYIAEITFSNIDISM 368
>gi|386819250|ref|ZP_10106466.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424356|gb|EIJ38186.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 569
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 196/437 (44%), Gaps = 79/437 (18%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+VSI ++GAV G NT A + AI + KGG + +P G WLTG L S++ L
Sbjct: 58 TVSIEKYGAVAGGLEKNTQAIEKAI---SEVSKKGGGTVKIPRGIWLTGPITLKSNINLH 114
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
LE GA++L S+N + + D + G L R S IN + ++ +TG G IDG
Sbjct: 115 LEDGALLLFSKNFEDYPLTD---TSFEG--LNTMRCISPINAMNVENIAITGK-GVIDGN 168
Query: 160 GSVW------------WD---------------WFSSQS--------------------- 171
G W WD WF ++S
Sbjct: 169 GDAWRPVKKGKMTSKQWDNLVASGGVLSEDGKIWFPTKSSKKGFDSREYFNVPNLTKKED 228
Query: 172 ----LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
++ RP +V ++ V++ TF N+PA+NIHP+ NV I+N+ V P S
Sbjct: 229 LESVKDFLRPVMVSIVNCNKVLLDGPTFQNSPAWNIHPLMSENVIIRNLKVRNPWYSQNG 288
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV 287
G+ +S NV I + +G DAI +KSG D+ G G PT +V ++ + + G V
Sbjct: 289 DGLDLESCKNVLIYNNTFDVGDDAICIKSGKDKDGRDRGIPTENVIVKNNTVYHAHGGFV 348
Query: 288 AFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI---NVAFG 344
GSEMSGG+ N+ V + + G+ F++T+GRGG + I ISD + NI + F
Sbjct: 349 -IGSEMSGGVKNINVSNCNFIGTDVGLRFKSTRGRGGVVENIYISDINMINIPTEAIRFN 407
Query: 345 A--CGNC------GSHPDDDFDPDAL------PAIDQITFKDIIGTNITIAGNFTGIQEA 390
GN + D+ D + P I K+II TN A F G+ E
Sbjct: 408 MFYSGNAPILEENQNAEDEQRDEQKVAVTEETPVFKNIYMKNIIATNSGKAAFFMGLPEK 467
Query: 391 PFANICLSNISLSINPG 407
N+ L N L + G
Sbjct: 468 SLENVTLENAMLEADEG 484
>gi|379724921|ref|YP_005317052.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
gi|378573593|gb|AFC33903.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
Length = 506
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 185/408 (45%), Gaps = 56/408 (13%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT +GA GDG NT A AI + GG +YVP+G ++TG L SH+TL LE
Sbjct: 6 ITSYGAQGDGLQDNTAAIAAAIEACSA---GGGGTVYVPAGDYVTGPIVLRSHITLQLEA 62
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
G+V+ + +D P+ + G E+ G Y LI G L+ V + G+ G I+GQG
Sbjct: 63 GSVL---RFTPRFDAYPPVQTRWSGYEMWG--YSPLIYGNGLKQVAIKGE-GVIEGQGQA 116
Query: 163 WWDWF----------SSQSL-----------------------NYSRPHLVEFISSENVV 189
WWD + +S+ L + RP L++ + E VV
Sbjct: 117 WWDAYRVIRAGGAAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEVV 176
Query: 190 VSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGH 249
+ +T N+P +N H VYC +V ++ + P +P G+ DS NV I DC +G
Sbjct: 177 LEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVGD 236
Query: 250 DAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYD 309
D + LKSG DE G GRPT +V + + G V GSE +GGI NV +
Sbjct: 237 DCLCLKSGIDEDGRRVGRPTENVAVTNCTMLHGHG-GVVLGSETAGGIRNVTISNCIFIG 295
Query: 310 SLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP---------- 359
+ GI +T + RGG + + IS+ + ++ A H D+ +P
Sbjct: 296 TDRGIRIKTNRARGGGVENVRISNIYMEDVLCPL-AINAFYKHGIDESNPLLTSPEAVPV 354
Query: 360 -DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSIN 405
+ P I I D+ N A F G+ E P ++ L +++ +
Sbjct: 355 TEGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRHVTFEMT 402
>gi|431050714|ref|ZP_19493383.1| polygalacturonase [Enterococcus faecium E1590]
gi|431764029|ref|ZP_19552575.1| polygalacturonase [Enterococcus faecium E3548]
gi|430560252|gb|ELA99556.1| polygalacturonase [Enterococcus faecium E1590]
gi|430621333|gb|ELB58100.1| polygalacturonase [Enterococcus faecium E3548]
Length = 445
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 188/376 (50%), Gaps = 29/376 (7%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
I FGA D LNT A Q AI + A GG + VP+G++LTG+ L S++ L L
Sbjct: 4 ILTFGASID--ELNTEAIQKAI---DAAASAGGGTVVVPAGEFLTGALFLKSNVELHLSA 58
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
GAV+ S +P + +V + R + + Y S I + ++ VTG GT+DG G
Sbjct: 59 GAVLKFSDDPKDYPIV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKK 112
Query: 163 WWDWFSSQ--SLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
WW F ++ +L Y RP L+ F + + V ++ + +P++ I+P+ CSN N+++
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILN 172
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLL 279
P +SP T GI P+S NV I +C I +G D I++K+G ++ Y R ++ I +
Sbjct: 173 PADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTM 229
Query: 280 QSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI 339
G V GSEMSG I N+ + ++ GI ++ +GRGG + I +S+ + N+
Sbjct: 230 VHGHG-GVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNV 288
Query: 340 NVAFGA-----CGNCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQ 388
F CG G P + P + PA +I F +I N+ + F G+
Sbjct: 289 MCPFILNLYYFCGPRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLA 348
Query: 389 EAPFANICLSNISLSI 404
E I NI +S+
Sbjct: 349 EQFIQEITFDNIDVSM 364
>gi|374324810|ref|YP_005077939.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
gi|357203819|gb|AET61716.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
Length = 476
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 192/376 (51%), Gaps = 25/376 (6%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I ++GA DG TL T A A +++ ++ GG ++VPSG +LTG+ L S++ L L
Sbjct: 28 NIVDYGAPQDGTTLATGAIAAA---IEAASNAGGGTVFVPSGTYLTGAIFLKSNIELHLS 84
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GA++ S + + VV+ S G++ + S I G L ++ VTG +GT+DG G
Sbjct: 85 PGAILSFSTDLVDYPVVE---SRWEGVQR--EVHASCIYGQNLENISVTG-SGTLDGNGQ 138
Query: 162 VWWDWFSS--QSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVH 219
WW+ + L Y RP L+ F + V + ++ N+P++ ++P+ C NV I N+S+
Sbjct: 139 PWWEKHRKHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNVSIL 198
Query: 220 APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLL 279
P +SP T GI P+S NV I +C I +G D I++K+G ++ P ++ I +
Sbjct: 199 NPTDSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCTM 256
Query: 280 QSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI 339
G +V GSEMSG I NV + + GI ++ +GRGG + I +S+ + ++
Sbjct: 257 VHGHG-AVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIVEDIRVSNIVMEDV 315
Query: 340 NVAF--GACGNCGSHPDD----DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQ 388
F CG D D +P D P +I F DI + A F G+
Sbjct: 316 ICPFILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLA 375
Query: 389 EAPFANICLSNISLSI 404
E A I SNI +S+
Sbjct: 376 EQYIAEITFSNIDISM 391
>gi|423223780|ref|ZP_17210249.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638155|gb|EIY32008.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 507
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 136/440 (30%), Positives = 200/440 (45%), Gaps = 83/440 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V++ +FGAVG+G+ L T AF AI + A+KGG L VP+G W TG L S++ L
Sbjct: 48 RKVNLADFGAVGNGEELCTAAFAKAI---DALAEKGGGHLIVPAGVWFTGPIVLKSNIDL 104
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LEKGAVIL S + + +V+ + L RR +S ++G L +V +TG+ G IDG
Sbjct: 105 HLEKGAVILFSPDVDLYPLVETVFE-----GLDTRRCQSPVSGRNLENVAITGE-GAIDG 158
Query: 159 QGSVW------------WD--------------WFS-SQSL------------------- 172
G W W WF Q+L
Sbjct: 159 NGHYWRPLKREKVTEGVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEEE 218
Query: 173 -----NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
++ RP +V I +NV + + F N+PA+N+HP+ C NV I+ + V P +
Sbjct: 219 WQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNG 278
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV 287
G+ +S N I + +G D I LKSG DE G GR +V + + G V
Sbjct: 279 DGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCTVFKGHGGFV 338
Query: 288 AFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-------N 340
GSEMSGG+ NV V + G+ F++ +GRGG + I I + + +I N
Sbjct: 339 V-GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAMMDIPTEPITFN 397
Query: 341 VAFGACG-----NCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQ 388
+ +G G +P LP +D+ T F++I N+ AG F GI
Sbjct: 398 LYYGGKSAVEVLESGEKVLAKVEP--LP-VDETTPCFRNIHVKNLVCAGARRALFFNGIP 454
Query: 389 EAPFANICLSNISLSINPGS 408
E P I L +I ++ G+
Sbjct: 455 EMPIDGIVLEDIDITSKLGA 474
>gi|310642874|ref|YP_003947632.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|309247824|gb|ADO57391.1| Galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|392303699|emb|CCI70062.1| Polygalacturonase PG [Paenibacillus polymyxa M1]
Length = 453
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 192/376 (51%), Gaps = 25/376 (6%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I ++GAV DG + T A A +++ ++ GG ++VP+G +LTG+ L S++ L +
Sbjct: 5 NIVDYGAVQDGTKMATEAIAAA---IEAASNAGGGTVFVPAGTYLTGAIFLKSNIELHVS 61
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GA++ S + + VV+ S G++ + S I G L ++ +TG +GT+DG G
Sbjct: 62 PGAILSFSTELADYPVVE---SRWEGVQR--EVHASCIYGENLENISITG-SGTLDGNGQ 115
Query: 162 VWWDWFSS--QSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVH 219
WW+ + + L Y RP L+ F + V + ++ N+P++ ++P+ C NV I N+S+
Sbjct: 116 PWWEKHRNHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSIL 175
Query: 220 APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLL 279
P +SP T GI P+S NV I +C I +G D I++K+G ++ P ++ I +
Sbjct: 176 NPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCTM 233
Query: 280 QSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI 339
G +V GSEMSG I NV + + GI ++ +GRGG I I IS+ + +
Sbjct: 234 VHGHG-AVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRISNIVMEEV 292
Query: 340 NVAF--GACGNCGSHPDD----DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQ 388
F CG D D +P D P +I F DI + A F G+
Sbjct: 293 ICPFILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLA 352
Query: 389 EAPFANICLSNISLSI 404
E A I SNI +S+
Sbjct: 353 EQYIAEITFSNIDISM 368
>gi|375309358|ref|ZP_09774639.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
gi|375078667|gb|EHS56894.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
Length = 504
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 121/379 (31%), Positives = 191/379 (50%), Gaps = 25/379 (6%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ +I ++GA DGKT T A NA +++ ++ GG + +PSG +LTG+ S++ L
Sbjct: 53 QAYNIVDYGAPQDGKTPATEAIANA---IEAASNAGGGTVVIPSGTYLTGAIFFKSNIEL 109
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
L GA++ S NP+ + VV+ S G++ + S I G L ++ VTG +G ++G
Sbjct: 110 HLSPGAILSFSTNPADYPVVE---SRWEGVQR--EVHASCIYGQNLENISVTG-SGILEG 163
Query: 159 QGSVWWDWFSS--QSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
G WW+ + + L Y RP L+ F + V + ++ N+P++ I+P+ C NV I N+
Sbjct: 164 NGQPWWEKHRNHPEELQYPRPKLISFDRCQRVTIKDIMLKNSPSWTINPIACYNVTIDNL 223
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
S+ P +SP T GI P+S NV I +C I +G D I++K+G ++ ++ I
Sbjct: 224 SILNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERIA--CENITITN 281
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ G V GSEMSG I NV + + GI ++ +GRGG I I +S+ +
Sbjct: 282 CTMVHGHG-GVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRVSNIVM 340
Query: 337 YNINVAF--GACGNCGSHPDD----DFDP----DALPAIDQITFKDIIGTNITIAGNFT- 385
+ F CG D D +P D P +I F DI + A F
Sbjct: 341 EEVICPFILNLYYFCGPRGKDKYVWDKNPYPVTDETPCFRRIHFADITARQVHAAAGFLY 400
Query: 386 GIQEAPFANICLSNISLSI 404
G+ E A I SNI +S+
Sbjct: 401 GLAEQYIAEITFSNIDISM 419
>gi|340751772|ref|ZP_08688582.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
gi|229420732|gb|EEO35779.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
Length = 512
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 192/392 (48%), Gaps = 31/392 (7%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++++ FGA GDG + +TLA Q AI S + G ++Y+P GK+L S L +LT+
Sbjct: 80 TLNVKRFGAKGDGVSNDTLALQTAIM---SCPENG--RVYIPKGKYLITSLFLKDNLTIE 134
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIEL--------PGRRYKSLINGYMLRDVVVTG 151
L +GA +LG ++ ++ L + E P + SLI G +++V + G
Sbjct: 135 LGEGAELLGDTKRENFGILPGLIDNDKNEEYYLGSWEGNPLDSFTSLITGINVKNVRIIG 194
Query: 152 DNGTIDGQGSV--WWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
G ++GQ S WW +++ + RP + S ENVV+ + +N+P++ IHP +
Sbjct: 195 -RGCLNGQASKENWWKNPKVKNIAW-RPRSIFLNSCENVVIEGIKIMNSPSWTIHPFLTN 252
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
N+ N+ + P +SP T GI P+S +NV ++G D I++KSG G +P+
Sbjct: 253 NLRFINLKIENPADSPNTDGIDPESCENVEYIGIDFSVGDDCIAIKSGKLYLGKVLNKPS 312
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIR 327
+ I+ ++ G V GSEMSGG+ N+ +EK Y + GI +T +GRG G I
Sbjct: 313 KNFIIKNCSMKYGHG-GVVIGSEMSGGVENINIEKCDFYKTDKGIRIKTRRGRGENGVID 371
Query: 328 QIVISDAELYNINVAFGACGNCGSHPDDDFD----------PDALPAIDQITFKDIIGTN 377
I + + + + V F PD + + P+I I+F++I +
Sbjct: 372 GIYVKNISMKEVKVPFVFNSFYFCDPDGKTEYVYTKEKLPVDERTPSIKNISFENIKAED 431
Query: 378 ITI-AGNFTGIQEAPFANICLSNISLSINPGS 408
+ AG G+ E P N+ N+ + G
Sbjct: 432 TLVCAGFLYGLPEKPIENVKFKNVEVDFKDGE 463
>gi|257869845|ref|ZP_05649498.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
gi|257804009|gb|EEV32831.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
Length = 437
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 175/352 (49%), Gaps = 22/352 (6%)
Query: 66 YLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYG 125
Y+ GG +L SG + TGS L S++ L L+ GAV+ S +P + VV
Sbjct: 23 YIDQLHQAGGGRLMFASGVYPTGSLMLKSNVELHLQPGAVLRFSDDPKEYPVV-----VS 77
Query: 126 RGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSS--QSLNYSRPHLVEFI 183
R + Y S I ++ +TG GTIDGQG WWD F + + L Y RP L+ F
Sbjct: 78 RWEGVKREVYASCIYADGAENIAITG-FGTIDGQGQKWWDVFRNHPEQLEYPRPKLISFD 136
Query: 184 SSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDC 243
S + + + +++ +N+P++ ++P+ C ++ + NI + P +SP T GI P+S NV I +C
Sbjct: 137 SCQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGIDPESCKNVRISNC 196
Query: 244 IIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVE 303
+I +G D I++KSG +E ++ I + G V GSEMSG I NV +
Sbjct: 197 LIDVGDDCIAIKSGTEETKERVS--CENITISNCQMLHGHG-GVVLGSEMSGDIRNVTIS 253
Query: 304 KIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DD 355
D+ GI ++ +GRGG I I +++ + N+ F CG G D
Sbjct: 254 NCIFQDTDRGIRLKSRRGRGGIIEDIRVNNLIMDNVICPFTLNLYYFCGPKGKEKYVWDK 313
Query: 356 DFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
+ P + P +I F +I N+ A F G+ E ++I +++S+
Sbjct: 314 NPYPISEETPQFRRIHFVNISARNVHAAAGFIYGLSEQFISDISFHEVAISM 365
>gi|357051036|ref|ZP_09112232.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
gi|355380661|gb|EHG27797.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
Length = 437
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 175/352 (49%), Gaps = 22/352 (6%)
Query: 66 YLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYG 125
Y+ GG +L SG + TGS L S++ L L+ GAV+ S +P + VV
Sbjct: 23 YIDQLHQAGGGRLMFASGVYPTGSLMLKSNVELHLQPGAVLRFSDDPKEYPVV-----VS 77
Query: 126 RGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSS--QSLNYSRPHLVEFI 183
R + Y S I ++ +TG GTIDGQG WWD F + + L Y RP L+ F
Sbjct: 78 RWEGVKREVYASCIYADGAENIAITG-FGTIDGQGQKWWDVFRNHPEQLEYPRPKLISFD 136
Query: 184 SSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDC 243
S + + + +++ +N+P++ ++P+ C ++ + NI + P +SP T GI P+S NV I +C
Sbjct: 137 SCQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGIDPESCKNVRISNC 196
Query: 244 IIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVE 303
+I +G D I++KSG +E ++ I + G V GSEMSG I NV +
Sbjct: 197 LIDVGDDCIAIKSGTEETKERVS--CENITISNCQMLHGHG-GVVLGSEMSGDIRNVTIS 253
Query: 304 KIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DD 355
D+ GI ++ +GRGG I I +++ + N+ F CG G D
Sbjct: 254 NCIFQDTDRGIRLKSRRGRGGVIEDIRVNNLIMDNVICPFTLNLYYFCGPKGKEKYVWDK 313
Query: 356 DFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
+ P + P +I F +I N+ A F G+ E ++I +++S+
Sbjct: 314 NPYPISEETPQFRRIHFVNISARNVHAAAGFIYGLSEQFISDISFHEVAISM 365
>gi|431796309|ref|YP_007223213.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787074|gb|AGA77203.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 524
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 186/410 (45%), Gaps = 56/410 (13%)
Query: 38 PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLT 97
P +I + G +G+ L T A Q+AI A+ GG L+ P+G +LTG+ ++ S+ T
Sbjct: 25 PGWTNILDVGGNNEGQ-LCTEAIQSAI---DKAAEAGGGTLFFPAGDYLTGAIHMKSNTT 80
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTI 156
L L+ GAV+ S N H+ LP E + LI Y ++ +TG G I
Sbjct: 81 LHLDAGAVLRFSTNFDHY-----LPFVQMRWEGTVMNNFSPLIYAYEAENITITG-RGKI 134
Query: 157 DGQGSVWW----------------------------------DWFSSQSLNYSRPHLVEF 182
DGQG WW ++ + L + RP L++
Sbjct: 135 DGQGKDWWMEMYRIHEAAPETLEESKYQKMWTAANEGLETSPNYQKTMRLKFFRPPLIQP 194
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
+NV + +T +N+P + ++P +C NV I +++ PP SP T GI P S NV I D
Sbjct: 195 FRCKNVRIEGVTIVNSPFWTVNPAFCDNVTITGVTIENPP-SPNTDGINPTSCRNVHISD 253
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQV 302
I++G D I++KSG D G + PT +V I + S G V GSE+SG I V +
Sbjct: 254 SHISVGDDCITIKSGRDMDGRKWDTPTENVTITNCTMLSGHG-GVVIGSEVSGSIRKVTI 312
Query: 303 EKIHLYDSLNGIEFRTTKGRGGYIRQI-----VISDAELYNINVAFGACGNCGSHPDDDF 357
+ GI + +GRGG + +I V+ D +L I + N P
Sbjct: 313 SNCVFDGTDRGIRLKAARGRGGVVEEIRVDNVVMKDIQLEAIVMNLFYDKNTKEGPVT-- 370
Query: 358 DPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPG 407
+ PA I ++ G+ I +AG GI E P I SNI++ G
Sbjct: 371 --EETPAFRNIHISNVTGSQINVAGKILGIPEMPIDQISFSNINMDAKEG 418
>gi|307718144|ref|YP_003873676.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
gi|306531869|gb|ADN01403.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
Length = 462
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 190/413 (46%), Gaps = 58/413 (14%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V +T GA G +T AF+ A+ +++ GG +L+VP G +L G L SHL +
Sbjct: 3 VDVTTLGADPTGLRESTDAFREALSRIEA---AGGGRLHVPPGDYLVGPLRLCSHLEFEV 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+GA I Q+P + VV + G+E Y ++ DV ++G G IDGQG
Sbjct: 60 ARGARIRFVQDPDRYPVVF---TRWEGVECHA--YAPMLFVEGAEDVRISG-GGVIDGQG 113
Query: 161 SVWWDW-------------FSS--------------------QSLNYSRPHLVEFISSEN 187
+ WW FSS + ++ RP L++ S
Sbjct: 114 ASWWRMYRDYREGRLTRFPFSSVEEIARRNAHLSTKASGGGGRESHFLRPPLLQVKDSRR 173
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAM 247
VV+ + N+ +N H +Y V I+ +S PP++P T G+ DSS NV IEDC +
Sbjct: 174 VVIEGIVLRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIEDCTFDV 233
Query: 248 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 307
G D + LKSG DE G GRPT V IR +++ G V GSE++GG+ NV V
Sbjct: 234 GDDCLGLKSGIDEDGRRVGRPTEHVVIRGCIMRRGHGGIVC-GSEIAGGVRNVVVTGCIF 292
Query: 308 YDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAF--GACGNCGSHPDDDFDPDAL--- 362
D+ GI ++ +GRGG++ ++I + + V CG P ++ L
Sbjct: 293 QDTDRGIRIKSRRGRGGFVENVMIHQIVMERVLVPLVVNLYYRCGIDPGEEEIVSRLASL 352
Query: 363 ---------PAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLSIN 405
PA+ I+ ++ T + + AG G+ E P + LS+ + ++
Sbjct: 353 LPLPVDETTPAVRNISISQVLATGVKSSAGFLLGLPERPIEGLVLSDYRVFMD 405
>gi|189461873|ref|ZP_03010658.1| hypothetical protein BACCOP_02539 [Bacteroides coprocola DSM 17136]
gi|189431467|gb|EDV00452.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 494
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 135/448 (30%), Positives = 194/448 (43%), Gaps = 80/448 (17%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V++ +FGAVGDG L T AF AI + KGG +L VP+G W TG L S++ L
Sbjct: 48 NEVNLKDFGAVGDGMHLCTEAFAKAI---DALDKKGGGKLTVPAGVWFTGPIVLKSNINL 104
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTID 157
+EKGA++L S + VD P E L RR +S I+G L +V +TG G ID
Sbjct: 105 HIEKGAIVLFSPD------VDLYPLVETVFEGLDTRRCQSPISGRNLVNVAITG-QGAID 157
Query: 158 GQGSVW------------WD--------------WFS---------------SQSL---- 172
G G W W WF Q+L
Sbjct: 158 GNGHYWRPLKKQKVTEGQWKAATSRGGVYKRPDYWFPYPETLKGDTISNMNVPQNLKTEE 217
Query: 173 ------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPY 226
++ RP +V FI +NV + + F N+PA+N+HP+ C NV I+N+ V P +
Sbjct: 218 EWQSVRHFLRPVMVSFIECKNVWLEGVVFQNSPAWNLHPLMCENVLIENVEVRNPSYAQN 277
Query: 227 TVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSS 286
G+ +S N I + +G D I LKSG DE G R +V + + G
Sbjct: 278 GDGLDLESCKNALIVNSSFDVGDDGICLKSGKDEDGRRRARACENVIVDGCTVYKGHGGF 337
Query: 287 VAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI------- 339
V GSEMSGG+ N+ V + G+ F++ +GRGG + I I + + +I
Sbjct: 338 VV-GSEMSGGVRNISVNNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISMIDIPTEPVTF 396
Query: 340 NVAFGACGNCGSHPDDDFDP---------DALPAIDQITFKDIIGTNITIAGNFTGIQEA 390
N+ +G + P + P I + + +N A F GI E
Sbjct: 397 NLYYGGKSAVEVLESGEVVPVKVAPMPVDETTPCFRNIHIEHLTCSNARRAMYFNGIPEM 456
Query: 391 PFANICLSNISLSINPGSYNSWECSNIH 418
P I L +I +S + C NIH
Sbjct: 457 PIDGITLKHIRISAK-NDAEFYYCKNIH 483
>gi|257070016|ref|YP_003156271.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
gi|256560834|gb|ACU86681.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
Length = 431
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/360 (33%), Positives = 176/360 (48%), Gaps = 25/360 (6%)
Query: 57 TLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWD 116
T +Q A L A GG ++ VP+G TG+ L S + L LE GA++ +P+ +
Sbjct: 17 TTQWQRA---LDEAAAAGGGRVSVPAGVHRTGALRLRSGVELHLEAGALLQFVPDPALYP 73
Query: 117 VVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFS--SQSLNY 174
V+ R GR + + + RDV +TG GTIDG G WWD F + L +
Sbjct: 74 AVE-----ARWEGAVGRVHSPCLYAHGERDVAITG-LGTIDGGGQTWWDTFRHRREELAH 127
Query: 175 SRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDS 234
RP L+ E V + ++ N+PA+ +HP C +V + N+ +H P ESP T GI P+S
Sbjct: 128 PRPTLIGLHECERVTIRDVALRNSPAWTVHPSLCEDVTLTNLHIHNPAESPNTDGIDPES 187
Query: 235 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 294
NV I DC I +G D I+LK+G + T +V I + G V GSEMS
Sbjct: 188 CRNVRISDCHIDVGDDCIALKAGTERTPDRVA--TENVTITGCTMVRGHG-GVVIGSEMS 244
Query: 295 GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVIS----DAELYNINV-AFGACGNC 349
GG+ NV + + GI +T + RGG + + +S D L + V F CG
Sbjct: 245 GGVRNVVISNCVFQGADRGIRLKTRRDRGGTVENVRVSTIVMDDVLCPLTVNPFYFCGPD 304
Query: 350 GSHP---DDDFDP-DA-LPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLS 403
G P D P DA P + + + TN+ AG+ G+ EAP ++ L ++S++
Sbjct: 305 GKEPHVGDRTARPVDAGTPHLRSLHLSHLTATNVHASAGHVFGLPEAPLSDFSLHDVSIT 364
>gi|261879637|ref|ZP_06006064.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333653|gb|EFA44439.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 496
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 194/431 (45%), Gaps = 78/431 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V++ +FGAVGDG TL T AF AI L +++GG +L VP G W TG L S++ L
Sbjct: 51 RQVNLKDFGAVGDGTTLCTEAFAKAIDKL---SEQGGGKLIVPGGVWFTGPIVLKSNINL 107
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LE GAVI S + S + V+ + G+E RR +S ++ +++ +TG G IDG
Sbjct: 108 HLEVGAVIQFSGDESLYPVIK---TSFEGLET--RRCQSPLSANGAKNIAITG-QGVIDG 161
Query: 159 QGSVW------------WD---------------WFSSQSL------------------- 172
G W W W +Q+
Sbjct: 162 NGQFWRPVKRGKVTDGQWKEILARPGGVEAKKGYWVPNQAYADAEKNADMNVPRAETDEE 221
Query: 173 -----NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
+ RP +V ++ +NV++ ++ F N+PA+NIHP+ C NV I + P +
Sbjct: 222 WNAIKRFLRPVMVSLVNCKNVLLKDVIFQNSPAWNIHPLMCENVIIDGVLARNPSYAQNG 281
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV 287
+ +S NV + + G D I +KSG DE G GRP +V + + + G V
Sbjct: 282 DALDLESCKNVLVVNSKFDAGDDGICIKSGKDESGRKRGRPCENVVVDGCTVFAGHGGFV 341
Query: 288 AFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-------N 340
GSEMSGG+ N+ V++ + G+ F++ +GRGG + I I D + +I N
Sbjct: 342 V-GSEMSGGVRNILVKRCQFLGTDVGLRFKSKRGRGGIVENIFIHDISMTDIKTDAITFN 400
Query: 341 VAFGACGNCGSHPDDDFDPDAL---------PAIDQITFKDIIGTNITIAGNFTGIQEAP 391
+ +G D D +PD + P I ++I+ A F G+ E P
Sbjct: 401 MYYGGKSVAEMLADGD-NPDNVSKMPVTGETPIFRHIDIRNIVCYGAGRAMEFNGLPEMP 459
Query: 392 FANICLSNISL 402
NI L N+ +
Sbjct: 460 IENINLENVHI 470
>gi|379720205|ref|YP_005312336.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
gi|378568877|gb|AFC29187.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
Length = 518
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 202/416 (48%), Gaps = 56/416 (13%)
Query: 21 GEVSDGQCDDQPTLDPRPHS--VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQL 78
GE+S Q D+ + R + ITEFGAV DG+T+NT A Q AI A G ++
Sbjct: 81 GEIS--QPSDKIKVSTRGQADRFDITEFGAVADGQTINTEAIQAAID-----ACTAGGKV 133
Query: 79 YVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRR---Y 135
VP G ++TG+ L S +TL++E+G V+LGS NP + P+ Y GR Y
Sbjct: 134 VVPKGTFVTGAIFLKSRMTLYVEQGGVLLGSDNPDDY----PVMQY----RWEGREQLCY 185
Query: 136 KSLINGY-----MLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVV 190
SLIN L +++ G+ G ID G + ++ + R V + + V +
Sbjct: 186 ASLINTKDPAEGRLEQIIIEGE-GKIDANGMALFHKEMAEKKGF-RGRAVCLRNVDGVYL 243
Query: 191 SNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTV--------GIVPDSSDNVCIED 242
++T +PA+ +H +YC+ V + ++ +H + G+ PDS+ +V I +
Sbjct: 244 KDITVRQSPAWCVHLIYCNGVSVNHVEIHTKKDERGRRYEHIFNGDGLNPDSTSDVYIFN 303
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQV 302
+IA D I++KSG +E G G P+ ++ I + + SG VA GSEMSGG+ NV++
Sbjct: 304 SMIASQDDCIAIKSGRNEEGRRVGIPSQNIRISNCIFK--SGFGVATGSEMSGGVRNVRI 361
Query: 303 EKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC---------GNCGSHP 353
D + + +GRG I + + D L N ++ C SH
Sbjct: 362 SDCRFEDVYSIATIKAPRGRGAVIENVTVEDCTLTNYSLEHEDCRWFRGAINIDQFYSHA 421
Query: 354 DDDFDPDALPAIDQIT--FKDIIGTNITI---AGN---FTGIQEAPFANICLSNIS 401
DFD D + +D+ T ++I NI + AGN G+ E+P NI L N++
Sbjct: 422 --DFDADKVEEVDEGTSVIRNIHLKNIVLDTHAGNAVFMAGLPESPLQNIRLENVN 475
>gi|281421112|ref|ZP_06252111.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281404647|gb|EFB35327.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 524
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 196/433 (45%), Gaps = 78/433 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V++ +FGA+GDG +L T AF AI + KGG +L VP G W TG L S++ L
Sbjct: 47 NEVNLKDFGAIGDGSSLCTTAFAKAI---DALTQKGGGKLIVPQGVWFTGPIVLKSNINL 103
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LEKGAVIL S + + + ++ + G++ RR +S I+G+ L +V +TG G IDG
Sbjct: 104 HLEKGAVILFSPDDALYPFIE---TSFEGLDT--RRCQSPISGHHLTNVAITG-QGCIDG 157
Query: 159 QGSVW------------WD--------------WFSSQSL-------------------- 172
G W W WF S+
Sbjct: 158 NGEYWRPLKKQKVTAAQWKQITSRGGAFKRADYWFPSEGALKADNSANMNVPKTPASEEE 217
Query: 173 -----NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
+ RP ++ ++ +NV ++ + F N+PA+NIHP+ C NV I+++ V P +
Sbjct: 218 WNEIKRFLRPVMISLVNCKNVWLNGVIFQNSPAWNIHPLMCENVLIEDVLVRNPSYAQNG 277
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV 287
G+ +S N I + +G D I +KSG D G G P +V + + G V
Sbjct: 278 DGLDLESCKNALIVNSTFDVGDDGICIKSGKDADGRKRGIPCENVIVNGCTVFKGHGGFV 337
Query: 288 AFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-------N 340
GSEMSGG+ N++V + G+ F++T+GRGG + I I + +++I +
Sbjct: 338 V-GSEMSGGVKNIKVSDCQFLGTDVGLRFKSTRGRGGIVENIYIDNMSMFDIQTDVITFD 396
Query: 341 VAFGACGNCGSHPDDD---------FDPD-ALPAIDQITFKDIIGTNITIAGNFTGIQEA 390
+ +G D D F D P I +I A F G+ E
Sbjct: 397 LYYGGKSAVEVLNDGDEAKSQKVQKFKVDETTPCFRNIDINHVICRTARRAAYFNGLPEM 456
Query: 391 PFANICLSNISLS 403
P +NI + ++ ++
Sbjct: 457 PVSNIHIKDMEVN 469
>gi|386727675|ref|YP_006194001.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
gi|384094800|gb|AFH66236.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
Length = 505
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 182/403 (45%), Gaps = 56/403 (13%)
Query: 48 AVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVIL 107
A G T NT A AI ++ + GG +YVP+G ++TG L SH+TL LE G+V+
Sbjct: 10 ATGCRTTRNTPAIAAAI---EACSAGGGGTVYVPAGDYVTGPIVLRSHITLQLEAGSVL- 65
Query: 108 GSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWF 167
+ +D P+ + G E+ G Y LI G L+ V + G+ G I+GQG WWD +
Sbjct: 66 --RFTPRFDAYPPVQTRWSGYEMWG--YSPLIYGNGLKQVAIKGE-GVIEGQGQAWWDAY 120
Query: 168 ----------SSQSL-----------------------NYSRPHLVEFISSENVVVSNLT 194
+S+ L + RP L++ + E VV+ +T
Sbjct: 121 RVIRAGGAAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEVVLEGIT 180
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
N+P +N H VYC +V ++ + P +P G+ DS NV I DC +G D + L
Sbjct: 181 LQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVGDDCLCL 240
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
KSG DE G GRPT +V + + G V GSE +GGI NV + + GI
Sbjct: 241 KSGIDEDGRRVGRPTENVAVTNCTMLHGHG-GVVLGSETAGGIRNVTISNCIFIGTDRGI 299
Query: 315 EFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP-----------DALP 363
+T + RGG + + IS+ + ++ A H D+ +P + P
Sbjct: 300 RIKTNRARGGGVENVRISNIYMEDVLCPL-AINAFYKHGIDESNPLLTSPEAVPVTEGTP 358
Query: 364 AIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSIN 405
I I D+ N A F G+ E P ++ L +++ +
Sbjct: 359 VIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRHVTFEMT 401
>gi|29121121|gb|AAO62947.1| putative polygalacturonase-like protein [Lactuca sativa]
gi|29121352|gb|AAO62948.1| putative polygalacturonase-like protein [Lactuca sativa]
Length = 193
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 117/193 (60%), Gaps = 3/193 (1%)
Query: 229 GIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 288
GI PDSS +VCIED I+ G D +++KSGWD+YGI Y RP+ D+ IRR L SS + +A
Sbjct: 2 GIDPDSSSHVCIEDSYISTGDDLVAVKSGWDQYGIKYARPSNDITIRR-LTGSSPFAGIA 60
Query: 289 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGN 348
GSE SGG+ NV E I L + GI +T GRGG IR I +SD + N+ +
Sbjct: 61 IGSETSGGVYNVLAEHITLKNMGIGIHLKTNIGRGGIIRNITVSDVYMVNVRKGIKISAD 120
Query: 349 CGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS--INP 406
G HPD +++P+ALP + + K++ G + AG G++ +PF +ICLSNI+L I
Sbjct: 121 VGDHPDKNYNPNALPVLKHVRIKNVWGKKVQQAGLIHGLKNSPFTDICLSNINLQGPIIS 180
Query: 407 GSYNSWECSNIHG 419
W+CS + G
Sbjct: 181 TRNVPWKCSYVSG 193
>gi|386722797|ref|YP_006189123.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
gi|384089922|gb|AFH61358.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
Length = 518
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 132/424 (31%), Positives = 206/424 (48%), Gaps = 57/424 (13%)
Query: 13 LCSAILINGEVSDGQCDDQPTLDPRPHS--VSITEFGAVGDGKTLNTLAFQNAIFYLKSF 70
+CS + +GE+S Q D+ + R + ITEFGAV DG+TLNT A Q AI
Sbjct: 74 VCS-VSQSGEIS--QPSDKIKVSTRGQADRFDITEFGAVADGQTLNTEAIQAAID----- 125
Query: 71 ADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIEL 130
A G ++ VP G ++TG+ L S +TL++E+G V+LGS NP + P+ Y
Sbjct: 126 ACTAGGKVVVPKGTFVTGAIFLKSRMTLYVEQGGVLLGSDNPDDY----PVMQY----RW 177
Query: 131 PGRR---YKSLINGY-----MLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEF 182
GR Y SLIN L +++ G+ G ID G + ++ + R V
Sbjct: 178 EGREQLCYASLINTKDPAEGRLEQIIIEGE-GKIDANGMALFHKEMAEKKGF-RGRAVCL 235
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTV--------GIVPDS 234
+ + V + ++T +PA+ +H +YC+ V + +I +H + G+ PDS
Sbjct: 236 RNVDGVYLKDITVRQSPAWCVHLIYCNGVSVNHIEIHTKKDEHGRRYEHIFNGDGLNPDS 295
Query: 235 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 294
+ +V I + +IA D I++KSG +E G G P+ ++ I + SG VA GSEMS
Sbjct: 296 TSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPSQNIRISNCTFK--SGFGVATGSEMS 353
Query: 295 GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC-------- 346
GG+ NV++ D + + +GRG I + + D L N ++ C
Sbjct: 354 GGVRNVRISDCRFEDVYSIATIKAPRGRGAVIENVTVEDCTLTNYSLEHEDCRWFRGAIN 413
Query: 347 -GNCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITI---AGN---FTGIQEAPFANICL 397
SH DFD D + +D+ T ++I NI + AGN G+ E+P NI L
Sbjct: 414 IDQFYSHA--DFDADKVEEVDEGTSVIRNIHLKNIVLDTHAGNAVFMAGLPESPLQNIRL 471
Query: 398 SNIS 401
N++
Sbjct: 472 ENVN 475
>gi|224536550|ref|ZP_03677089.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521806|gb|EEF90911.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
Length = 462
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 136/456 (29%), Positives = 216/456 (47%), Gaps = 47/456 (10%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQ--PTLDPRP---HSVSITEFGAVGDGKTL 55
MK ++ +AL A+ I + S D +LDP + IT+FGAVGDGKTL
Sbjct: 2 MKQISLMITSVALTFAMNICAQQSPWDKADAIVQSLDPVTFPDKTYVITDFGAVGDGKTL 61
Query: 56 NTLAFQNAIFYLKSFADKGGAQLYVPSGKW-LTGSFNLTSHLTLFLEKGAVILGSQNPSH 114
AF+ AI +D GG ++ VP+G + + G S++ + LEKGA++ S N S
Sbjct: 62 CKEAFEKAITIC---SDNGGGKITVPAGTYYMNGPLVFKSNVNVHLEKGAILDFSTNES- 117
Query: 115 WDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD-WFSSQSLN 173
D + + + G EL Y LI Y ++++ +TG+ GT++G GS + W + Q++
Sbjct: 118 -DYLPAVITRWEGTEL--FNYSPLIYAYHVQNIALTGE-GTVNGNGSKKFSPWNNIQTVE 173
Query: 174 YS-----------------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSN 210
RP +E NV + +T +++P + IHP++C+N
Sbjct: 174 QEMLRKMGRTNVPVYRRIFGEGYKLRPGFIEPFGCANVRIEGVTIMDSPFWVIHPIFCNN 233
Query: 211 VHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTT 270
V ++N++V + + G P+S NV IE C + G DAI++KSG D G+PT
Sbjct: 234 VIVRNVTVDS--HNYNNDGCDPESCRNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTE 291
Query: 271 DVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIV 330
+V IR +S + V GSE++GG+ N+ +E I + S N I F++ RG YI+ +
Sbjct: 292 NVVIRNCSFRSKI-NGVCIGSEIAGGVRNIFIENITIPKSSNAIYFKSNLDRGAYIQDVY 350
Query: 331 ISDAELYNINVAFGACGNCGSHPDDDFDPDALPA--IDQITFKDIIGTNITIAGNFTGIQ 388
+ + + + A F P + I+ +T K I +A G
Sbjct: 351 VRNVQADTVRTALIRFEPNYKGERSAFHPTLFDSFLIENVTCKQSNECGIYMA----GFA 406
Query: 389 EAPFANICLSNISLSINPGSYNSWECSNIHGSSESV 424
E P NI L N+++ P Y NI S V
Sbjct: 407 ERPLQNIVLKNVTIGKVPTPYCFQNGENIRFQSVKV 442
>gi|393786391|ref|ZP_10374527.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
gi|392660020|gb|EIY53637.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
Length = 509
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 193/436 (44%), Gaps = 77/436 (17%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
V + +FGAVG+G L T AF AI ++ + +GG L VP+G WLTG L S++ L
Sbjct: 48 KVFLPDFGAVGNGVELCTDAFAKAI---ETLSARGGGYLIVPAGIWLTGPIVLKSNINLH 104
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
+EKGAVIL S + + +V+ + L RR +S I+G L +V +TG G IDG
Sbjct: 105 IEKGAVILFSPDVELYPLVETVFE-----GLDTRRCQSPISGRNLTNVAITG-QGAIDGN 158
Query: 160 GSVW------------WD--------------WFS-SQSL-------------------- 172
G W W WF Q+L
Sbjct: 159 GHYWRPLKREKVTESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEEEW 218
Query: 173 ----NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTV 228
++ RP +V I +NV + F N+PA+N+HP+ C NV I++I V P +
Sbjct: 219 QSVRHFLRPVMVSLIECKNVWFQGVIFQNSPAWNLHPLMCENVLIEDIQVRNPSYAQNGD 278
Query: 229 GIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 288
G+ +S N I + +G D I LKSG DE G RP +V + + G V
Sbjct: 279 GLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGHGGFVV 338
Query: 289 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-------NV 341
GSEMSGG+ NV V + G+ F++ +GRGG + I I + + +I N+
Sbjct: 339 -GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNVSMMDIPTEPVTFNL 397
Query: 342 AFGACG-----NCGSHPDDDFDP----DALPAIDQITFKDIIGTNITIAGNFTGIQEAPF 392
+G G DP D P I +++ +N A F GI E P
Sbjct: 398 YYGGKSAVEVLESGEKIPAKVDPLPVDDTTPCFRNIHISNLVCSNARRALFFNGIPEMPI 457
Query: 393 ANICLSNISLSINPGS 408
I L N+ ++ G+
Sbjct: 458 DGITLDNLDITSQIGA 473
>gi|386346149|ref|YP_006044398.1| glycoside hydrolase family protein [Spirochaeta thermophila DSM
6578]
gi|339411116|gb|AEJ60681.1| glycoside hydrolase family 28 [Spirochaeta thermophila DSM 6578]
Length = 462
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 185/413 (44%), Gaps = 58/413 (14%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V +T GA G +T AF+ A L GG +L+VP G +L G L SHL +
Sbjct: 3 VDVTTLGADPTGLRESTDAFREA---LSRIEGAGGGRLHVPPGDYLVGPLRLCSHLEFEV 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+GA I Q+P + VV + G+E Y +I D+ ++G G IDGQG
Sbjct: 60 ARGARIRFVQDPDRYPVVF---TRWEGVECHA--YAPMIFVEGAEDIRISG-GGVIDGQG 113
Query: 161 SVWWDW-------------FSS--------------------QSLNYSRPHLVEFISSEN 187
WW FSS + ++ RP L++ S
Sbjct: 114 DAWWRMYRDYREGRVTRFPFSSVEEIARRNAHLSTKASGGGGRESHFLRPPLLQVKDSRR 173
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAM 247
VV+ + N+ +N H +Y V I+ +S PP++P T G+ DSS NV IEDC +
Sbjct: 174 VVIEGIILRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIEDCTFDV 233
Query: 248 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 307
G D + LKSG DE G GRPT V IR +++ G V GSE++GG+ NV V
Sbjct: 234 GDDCLGLKSGIDEDGRRVGRPTEHVVIRGCIMRRGHGGIVC-GSEIAGGVRNVVVTGCIF 292
Query: 308 YDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAF--GACGNCGSHPDDDFDPDAL--- 362
D+ GI ++ +GRGG++ +++ + + V CG P ++ L
Sbjct: 293 QDTDRGIRIKSRRGRGGFVENVMVHQIVMERVLVPLVVNLYYRCGIDPGEEETISRLASL 352
Query: 363 ---------PAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLSIN 405
PA+ I+ + T + + AG G+ E P + LS+ + ++
Sbjct: 353 LPLPVDETTPAVRNISISQVFATGVKSSAGFLLGLPERPIEGLMLSDYRVVMD 405
>gi|395803596|ref|ZP_10482840.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434150|gb|EJG00100.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 522
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 183/385 (47%), Gaps = 54/385 (14%)
Query: 57 TLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWD 116
T A QNAI + + GG ++ P+G++LTG+ L S++T+ L+ GA++ S+N +D
Sbjct: 39 TQAIQNAI---EKASKNGGGTIFFPAGEYLTGALTLKSNITIHLDSGALLKFSEN---FD 92
Query: 117 VVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD---------- 165
D LP E + + ++ L + ++ +TG G IDGQG WW+
Sbjct: 93 --DFLPYVEMRYEGIVMKSFQPLFYAKDVENIAITG-RGIIDGQGKAWWNEVYRIETAKE 149
Query: 166 ----------WFSSQSLNYS-------------RPHLVEFISSENVVVSNLTFLNAPAYN 202
W Y+ RP + + +N+++ +TF N+P +
Sbjct: 150 PLPPTKYQTMWEEQNKGLYTEPYYKRTVDKKFFRPSFFQAYNCKNILIEGVTFKNSPFWT 209
Query: 203 IHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYG 262
I+P +C NV + IS+ P SP T GI P S NV I DC I++G D I++KSG D G
Sbjct: 210 INPEFCDNVRVTGISIFN-PHSPNTDGINPSSCTNVHISDCHISVGDDCITIKSGRDGDG 268
Query: 263 IAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGR 322
YG+ T +V I + S G V GSEMSGGI + + + GI ++ +GR
Sbjct: 269 RKYGKATENVTITNCTMLSGHG-GVVIGSEMSGGIKKITISNCVFDGTDRGIRIKSARGR 327
Query: 323 GGYIRQIVISDAELYNIN---VAFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIGTN 377
GG + I + + + NI + + G+ +P + P I +I +N
Sbjct: 328 GGVVEDIRVDNIVMKNIKEEAIVLSLFYDKGTT----VEPVTEKTPIFRNIHMSNITASN 383
Query: 378 ITIAGNFTGIQEAPFANICLSNISL 402
+ AG GI E P NI SNI++
Sbjct: 384 VNKAGQILGITEMPIQNITFSNINM 408
>gi|326799707|ref|YP_004317526.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550471|gb|ADZ78856.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 517
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 190/422 (45%), Gaps = 41/422 (9%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++++ +FGA D L T A + AI + GG +Y P G +LTG +L S++TLF
Sbjct: 22 ALNVLDFGAKNDSSALATTAIKEAI---AKASQAGGGTIYFPPGTYLTGPIHLKSNITLF 78
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
+E GA + S N H+ + +PS G + + I Y ++ +TG GT++G
Sbjct: 79 IEAGAELCFSDNFDHY--LPMVPSRWEGTMV--TNFSPFIYAYEAENIRITG-RGTLNGN 133
Query: 160 GSVWWDWFSSQSLN-----------------------------YSRPHLVEFISSENVVV 190
G WW + N + RP ++ + +NV +
Sbjct: 134 GKKWWAYSEVHVKNSPESKWQKEFHKLNKNVLHPDLPGWVERGFLRPPFIQPMYCKNVRI 193
Query: 191 SNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHD 250
+T N+P + ++P +C NV I ++++ PP SP T GI P+S NV I +C I++G D
Sbjct: 194 DGITIKNSPFWTVNPEFCDNVTIDGVTINNPP-SPNTDGINPESCSNVHISNCHISVGDD 252
Query: 251 AISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++KSG D G RP + I + S G V GSEMSG + + + +
Sbjct: 253 CITIKSGKDRSGRKEARPAENYTITNCTMLSGHG-GVVIGSEMSGDVKKIVISNCIFDGT 311
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITF 370
GI +T +GRGG + I +S+ + NI + D + + P I
Sbjct: 312 DRGIRIKTARGRGGVVEDIQVSNIVMKNIKQQAIVLDMQYAKTDREPVSERTPRFSNIHL 371
Query: 371 KDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCP 430
+I AG G++E P N+ SN+ + G ++ I S+ SV P P
Sbjct: 372 SNITAQG-EQAGYLNGLEEMPIENVSFSNMVMETKTG-FDIRASKGIVFSNVSVNPSTGP 429
Query: 431 EL 432
+
Sbjct: 430 AI 431
>gi|29346428|ref|NP_809931.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338324|gb|AAO76125.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 445
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 195/443 (44%), Gaps = 67/443 (15%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
M + + LL L LC+ ++ R V + + GA +GK LNT
Sbjct: 1 MNLRITLLAFLCLCATAIL-----------------RAERVDMLKAGAKANGKALNTKLI 43
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ I L GG L+ P+G +LTGS +L S++TL LE GA +L S N D +
Sbjct: 44 NSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFD--DYLPF 98
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW---------------- 164
+ G+ + + ++ LI ++ + G+ GT+DGQG WW
Sbjct: 99 VEVRHEGVMM--KSFQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMR 155
Query: 165 ------------------------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
D+ S+ + RP ++ + + V + + +N+P
Sbjct: 156 DINKYQPMWDAQNDTTAIYAETNKDYVSTLQRRFFRPPFIQPVRCKKVKIEGVKIVNSPF 215
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+ ++P +C NV I+ I+++ P SP T GI P+S NV I DC I++G D I++KSG D
Sbjct: 216 WTVNPEFCDNVTIKGITINNVP-SPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDA 274
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G P ++ I + S G V GSEMSG + V + + GI ++T+
Sbjct: 275 QARRLGVPCENITITNCTMLSGHG-GVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTR 333
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI 380
GRGG + I +S+ + NI S + + P + + T++
Sbjct: 334 GRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQMPAEAKSERTPIFRNVHISGMTVTDVKT 393
Query: 381 AGNFTGIQEAPFANICLSNISLS 403
G++EAP ++I L +I +
Sbjct: 394 PIKIVGLEEAPISDIVLRDIHIQ 416
>gi|337752008|ref|YP_004646170.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
gi|336303197|gb|AEI46300.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
Length = 506
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 184/408 (45%), Gaps = 56/408 (13%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT +GA GDG NT A AI + GG +YVP+G ++TG L SH+TL LE
Sbjct: 6 ITSYGAQGDGLQDNTAAIAAAIEACSA---GGGGTVYVPAGDYVTGPIVLRSHITLQLEA 62
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
G+++ + +D P+ + G E+ G Y LI G L+ V + G+ G I+GQG
Sbjct: 63 GSML---RFTPRFDAYAPVQTRWSGYEMWG--YSPLIYGNGLKQVAIKGE-GVIEGQGQA 116
Query: 163 WWDWF----------SSQSL-----------------------NYSRPHLVEFISSENVV 189
WWD + +S+ L + RP L++ + E VV
Sbjct: 117 WWDAYRVIRAGGTAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEVV 176
Query: 190 VSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGH 249
+ +T N+P +N H VYC +V ++ + P +P G+ DS NV I DC +G
Sbjct: 177 LEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVGD 236
Query: 250 DAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYD 309
D + LKSG D G GRPT +V + + G V GSE +GGI NV +
Sbjct: 237 DCLCLKSGIDADGRRVGRPTENVAVTNCTMLHGHG-GVVLGSETAGGIRNVTISNCIFIG 295
Query: 310 SLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP---------- 359
+ GI +T + RGG + + IS+ + ++ A H D+ +P
Sbjct: 296 TDRGIRIKTNRARGGGVENVRISNIYMEDVLCPL-AINAFYKHGIDESNPLLTSPEAVPV 354
Query: 360 -DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSIN 405
+ P I I D+ N A F G+ E P ++ L +++ +
Sbjct: 355 TEGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRHVTFEMT 402
>gi|23099543|ref|NP_693009.1| hypothetical protein OB2088 [Oceanobacillus iheyensis HTE831]
gi|22777773|dbj|BAC14044.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 495
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 194/411 (47%), Gaps = 57/411 (13%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+ITEFGA GD T NT + +AI K AD GG LY+P+G +LTG +L S+LT+++E
Sbjct: 4 NITEFGAKGDSNTDNTESISSAI---KRCADSGGGTLYIPAGTYLTGPISLISNLTIYIE 60
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GA ++ + S + P+ + G E G + L+ G L +V + G +G IDGQG
Sbjct: 61 SGAKLVFIDDFSAY---PPVKTRWSGYECYG--FSPLLYGNGLTNVSIIG-SGCIDGQGE 114
Query: 162 VWW----------DWFSSQS-----LNYS-----------------RPHLVEFISSENVV 189
WW ++ Q+ LN S RP L++ ++V
Sbjct: 115 AWWEVNHLLRKGEEYDHPQTKEIAELNKSITEPKNTNLVEWPSQFLRPPLLQMYDCDSVT 174
Query: 190 VSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGH 249
+ +T N+P +N H VYC NV I N+ P ++P G+ DS NV + +C +G
Sbjct: 175 LDGITLENSPFWNTHFVYCDNVTIHNVKFKNPWDTPNGDGLDLDSCSNVRVSNCHFDVGD 234
Query: 250 DAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYD 309
D ++ KSG +E G RPT +V + +++ G + GSE SGGI N+ V
Sbjct: 235 DCLAFKSGINEDGRRVARPTENVAVTNCTMKNGHG-GIVMGSENSGGIRNIAVSNCVFIG 293
Query: 310 SLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD----------- 358
+ GI +T + RG YIR I+I + + + A + H D D
Sbjct: 294 TDRGIRLKTNRARGSYIRDILIDNIYMDGVLCPL-AINSFYRHGLDKSDSLINELSPIEI 352
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSN--ISLSINP 406
+ P I+ I ++ N A F G+ E +I L + I ++INP
Sbjct: 353 SEKTPEIEYIHISNVTARNCRSAAGFIYGLPEKYVKDIILRHVLIEMTINP 403
>gi|393781526|ref|ZP_10369720.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
gi|392676130|gb|EIY69568.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
Length = 447
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 181/407 (44%), Gaps = 50/407 (12%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
+ V + + GA DGKTLNT + + L + GG L+ P+G +LTG+ L S++
Sbjct: 21 KAERVDMLKSGAKADGKTLNTTLINHTVDRL---SQAGGGTLFFPAGTYLTGAIRLKSNI 77
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL LE GA +L S N D + + G+ + + + LI+ ++ + G+ GT+
Sbjct: 78 TLELEAGATLLFSDNFD--DYLPFMEVRHEGVMM--KSFSPLISAMDAENITIKGE-GTL 132
Query: 157 DGQGSVWW----------------------------------------DWFSSQSLNYSR 176
DGQG WW DW + + R
Sbjct: 133 DGQGKAWWTEFFRIYVDLEKNGMRELNKYQPLWERENDVEALYAETNEDWHGTLKRRFFR 192
Query: 177 PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSD 236
P ++ + V + + +N+P + ++P +C NV + +++H P SP T GI P+S
Sbjct: 193 PPFIQPVRCRRVRIEGVKIINSPFWTVNPEFCDNVVVTGVTIHNVP-SPNTDGINPESCR 251
Query: 237 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 296
NV I DC I++G D I+LKSG D G P ++ I + S G V GSEMSG
Sbjct: 252 NVHISDCHISVGDDCITLKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSEMSGS 310
Query: 297 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDD 356
+ V + + GI ++T+GRGG + I +S+ + NI S +
Sbjct: 311 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIIMSNIKREAVVLNLKYSEMPVE 370
Query: 357 FDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
+ P I+ + + G++EAP +I L +I++
Sbjct: 371 PMSERTPLFRDISISGLTAVGVKTPVKIVGLEEAPVTDIILRDINVK 417
>gi|29349531|ref|NP_813034.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341440|gb|AAO79228.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 528
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 206/423 (48%), Gaps = 68/423 (16%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA+ DG TLNT A NAI K+ + KGG ++ +P G WLTG L S++ L
Sbjct: 57 YEVNIRDFGALSDGVTLNTEAINNAI---KAVSSKGGGKVIIPEGLWLTGPVVLLSNVNL 113
Query: 99 FLEKGAVILGSQNPSHWDVVD-------------PLPSY--------GRGI-ELPGRRYK 136
+ EK A+I+ S + S + ++D P+ + G G+ + G R++
Sbjct: 114 YAEKNALIVFSSDTSLYPIIDTSFEGLDTKRCQSPISAMNAENIAITGNGVFDGAGDRWR 173
Query: 137 SLINGYML----RDVVVTGDNGTIDGQGSVWW-------------------------DWF 167
+ M +++V +G G +D G VW+ +W
Sbjct: 174 PVKKDKMTERQWKNLVSSG--GKVDENGKVWYPDAGALKASVLMTGQNNGQKEITDEEWT 231
Query: 168 SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
+S + RP ++ + S+ +++ +TF N+P + IHP+ C ++ + ++ V P S
Sbjct: 232 YMKS--WLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNG 289
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV 287
+ +S NV + +C G DAI LKSG DE G G P +V I+ + G V
Sbjct: 290 DALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLHGHGGFV 349
Query: 288 AFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACG 347
GSEMSGG+ NV V + G+ F++T+GRGG + I I + + I+++ A
Sbjct: 350 -IGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINM--IDISNDALT 406
Query: 348 NCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSNI 400
+ +DF +P +++ T F++I +N+ G F G+ E P NI + N+
Sbjct: 407 MDLYYAVNDFPETPIPDVNEETPVFRNIYISNVLCRGAERAVYFNGLPEMPLKNIFIKNM 466
Query: 401 SLS 403
+++
Sbjct: 467 TVT 469
>gi|146301824|ref|YP_001196415.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156242|gb|ABQ07096.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 522
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 184/385 (47%), Gaps = 54/385 (14%)
Query: 57 TLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWD 116
T A QNAI + + GG ++ P+G++LTG+ L S++T+ L+ GA++ S+N +D
Sbjct: 39 TQAIQNAI---EKASKNGGGTIFFPAGEYLTGALTLRSNITIHLDSGALLKFSEN---FD 92
Query: 117 VVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD---------- 165
D LP E + + ++ L ++++ +TG G IDGQG WW+
Sbjct: 93 --DFLPYVEMRYEGIVMKSFQPLFYAKDVQNITITG-RGVIDGQGKAWWNEVYRIETAKE 149
Query: 166 ----------WFSSQSLNYS-------------RPHLVEFISSENVVVSNLTFLNAPAYN 202
W Y+ RP + + +N+++ +TF N+P +
Sbjct: 150 PLPPTKYQTMWEEQNKGLYTEPYYKRTVDKKFFRPSFFQAYNCKNILIEGVTFQNSPFWT 209
Query: 203 IHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYG 262
I+P +C NV + IS+ P SP T GI P S NV I +C I++G D I++KSG D G
Sbjct: 210 INPEFCDNVTVTGISIFN-PHSPNTDGINPSSCTNVHISNCHISVGDDCITIKSGRDGDG 268
Query: 263 IAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGR 322
YG+ T +V I + S G V GSEMSGGI + + + GI ++ +GR
Sbjct: 269 RKYGKATENVTITNCTMLSGHG-GVVIGSEMSGGIKKITISNCVFDGTDRGIRIKSARGR 327
Query: 323 GGYIRQIVISDAELYNIN---VAFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIGTN 377
GG + I + + + NI + + G+ +P + P I +I +N
Sbjct: 328 GGVVEDIRVDNIVMKNIKEEAIVLSLFYDKGTQ----VEPVTEKTPIFRNIHMSNITASN 383
Query: 378 ITIAGNFTGIQEAPFANICLSNISL 402
+ AG GI E P NI SNI++
Sbjct: 384 VNKAGQILGITEMPIQNITFSNINM 408
>gi|392950256|ref|ZP_10315813.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434538|gb|EIW12505.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 427
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 176/354 (49%), Gaps = 30/354 (8%)
Query: 72 DKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELP 131
+ GG QL + +G + GS L S TLFLE GAV+ S DV P+ S G
Sbjct: 33 EAGGGQLNLTAGVYEVGSLELGSDFTLFLEAGAVLKFSHET---DVYPPVESRWEG--AT 87
Query: 132 GRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQS--LNYSRPHLVEFISSENVV 189
Y++ + G L+ V +TG+ G +DGQG WW F ++ L Y RP+L SE VV
Sbjct: 88 QTVYRACLYGSHLKRVKITGE-GVVDGQGKKWWRRFDEKAAELEYPRPYLCSIEHSEQVV 146
Query: 190 VSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGH 249
+ N+TF+N+PA+ +HP C NV I N++V P SP T G+ P+S N+ I +C +G
Sbjct: 147 IENVTFVNSPAWTLHPFDCENVAINNVTVVNPKNSPNTDGLDPESCRNIRIANCCFDVGD 206
Query: 250 DAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYD 309
D I++KSG ++ + ++ I + G V FGSEMSG I NV + D
Sbjct: 207 DCIAIKSGTEDASQSIA--CENIIISGCNMVHGHG-GVVFGSEMSGDIRNVTISNCVFQD 263
Query: 310 SLNGIEFRT-----TKGRGGYIRQIVISDAELYNINVAFGACGNCGSH---------PDD 355
+ GI F+T + G + IV+ + I ++ CG G+ P D
Sbjct: 264 TDRGIRFKTRRGRGGRISGISVNNIVMDNVLCPLIINSYYFCGKRGNEAYVWTKEALPVD 323
Query: 356 DFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLSINPGS 408
+ P + ++F +I TNI + AG G+ E +N+ LS+ ++ S
Sbjct: 324 ----ERTPKLSNLSFSHLIATNIRSCAGFIYGLPEMAISNVTLSDARFELSKDS 373
>gi|300725841|ref|ZP_07059307.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299776888|gb|EFI73432.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 447
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 195/408 (47%), Gaps = 49/408 (12%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGS 89
+QPT + VSI +FGA +NT+A AI K+ + GG ++ +P+G W+TG+
Sbjct: 17 EQPTF--ANYEVSIIDFGAQCGPDHVNTMAINQAI---KAVSQHGGGKVIIPAGYWMTGA 71
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
+ S++ L+L+ A + + N S + +VD P +R + I+G L+++ +
Sbjct: 72 IEMQSNVNLYLDYNAFVSFTTNISDYRLVDTDFEGS-----PSKRCIAPISGTHLQNIAI 126
Query: 150 TGDNGTIDGQGSVW------------WDWFSSQ--SLNYS-------------RPHLVEF 182
TG +G DG G W W F+S+ S+N RP L+ F
Sbjct: 127 TG-HGVFDGSGERWRPVKRSKLTSAQWKNFTSRPGSVNKKGDVWEPDSNAANIRPVLLNF 185
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
S +NV + +TF N+PA+ +HP+ C NV I NI V+ P + + +S NV I +
Sbjct: 186 TSCKNVKLEGVTFKNSPAWCVHPLLCENVTIDNIKVNNPWYAQNGDALDVESCKNVVIIN 245
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQV 302
+ G DAI +KSG +E G G P +V+I+ + G V GSEMSGG+ N+ +
Sbjct: 246 SLFDAGDDAICIKSGKNEAGRRRGVPCENVYIKNNTVLHGHGGFV-IGSEMSGGVKNIYI 304
Query: 303 EKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-------NVAFGACGNCGSHPDD 355
+ G+ F++ +GRGG + I I + NI N+ + + G D
Sbjct: 305 SDCTFIGTDVGLRFKSARGRGGVVENIYIDRINMKNIVNEAITMNLYYSSNGKPAERTDV 364
Query: 356 DFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
+ + P I K+++ + G+ E P NI + N+ +S
Sbjct: 365 N---EGTPVFRNIEMKNLLVEGAGKSFYLYGLPEMPLENISIQNMRVS 409
>gi|325298782|ref|YP_004258699.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
gi|324318335|gb|ADY36226.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
Length = 535
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 204/441 (46%), Gaps = 81/441 (18%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
QPT HS SITEFGAV DG TLNT AF I + + +GG + VP+G WLTG
Sbjct: 51 QPTFPD--HSRSITEFGAVADGITLNTEAFAQTI---DAVSQQGGGTVVVPAGLWLTGPI 105
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
L S++ L LE+ A++L + + + + ++ + G+E RR +S ++ ++ +T
Sbjct: 106 VLKSNINLHLEENALVLFTADHTQYPIIK---TSFEGLET--RRCQSPVSANGAENIAIT 160
Query: 151 GDNGTIDGQGSVW------------WD---------------WFSSQS------------ 171
G G +DG G W W+ W+ S+
Sbjct: 161 G-KGVMDGNGDTWRPVKKGKMTASQWNKLVASGGVLNEKGDIWYPSEGSIKGANACKDFN 219
Query: 172 --------------LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNIS 217
++ RP L+ FI + V++ +TF N+P++ +HP+ C ++ + NIS
Sbjct: 220 VPEGIETEEDWNSIRDWLRPVLLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDLTVYNIS 279
Query: 218 VHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR-R 276
V P S + +S + V + + G D I +KSG DE G G P ++ IR
Sbjct: 280 VSNPWYSQNGDALDIESCNRVLVLNSSFDAGDDGICIKSGKDESGRRRGEPCQNIIIRDN 339
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QI 329
V+L G V GSEMSGG+ N+ V+ + G+ F++T+GRGG + +
Sbjct: 340 VVLHGHGGFVV--GSEMSGGVKNIYVDNCTFLGTDVGLRFKSTRGRGGVVENIHINNINM 397
Query: 330 VISDAELYNINVAFGAC----GNCGSHPDDDFDP---DALPAIDQITFKDIIGTNITIAG 382
+ E ++ +G G+ P ++ P + PA I K++ N+ A
Sbjct: 398 INIPNEALIFDLFYGGNAPGEGDAPGAPKEEVVPPVTEETPAFRDIFIKNVTAKNVGRAV 457
Query: 383 NFTGIQEAPFANICLSNISLS 403
F G+ E P NI L N+++S
Sbjct: 458 LFNGLPEMPIKNIFLENVTIS 478
>gi|346223842|ref|ZP_08844984.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 532
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 134/409 (32%), Positives = 199/409 (48%), Gaps = 54/409 (13%)
Query: 39 HSVSITEFGAV---GDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
+ I +FGA D T A AI + ++ GG + VP+G+WLTG +L S+
Sbjct: 64 KTFDIRDFGAKEMDADKTNKCTDAIHKAI---DAASESGGGTVLVPAGQWLTGPVHLKSN 120
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
+ L LEK A + S++ + D + +P G+E+ Y LI + +V +TG GT
Sbjct: 121 INLHLEKNASLFFSEDKT--DYLPVVPQRYEGVEV--YNYSPLIYAANVTNVSITG-KGT 175
Query: 156 IDGQGSVWWDWFS------------SQSLNYS--------RPHLVEFISSENVVVSNLTF 195
++GQG W +W + S+ N+ RP+ V F S+N++V +T
Sbjct: 176 LEGQGQHWLEWGTVQPRANAAKVPLSRRKNFGKGAGKEGMRPNFVVFWKSKNILVEGITL 235
Query: 196 LNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLK 255
+P +NIH VY N +++I+V++ +S G+V DSS +V +E + G DAI LK
Sbjct: 236 NESPMWNIHLVYSQNAIVRDITVNSL-DSQNGDGVVVDSSHDVLLEYNQLHTGDDAIVLK 294
Query: 256 SGWDEYGIAYGRPTTDVHIRRVL---LQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN 312
SG++E G+A PT +V IR +++ SG V FGSE SGGI NV V
Sbjct: 295 SGFNEDGLAINIPTENVVIRNYYAYKVRTGSGG-VVFGSETSGGIRNVYVHDAVFEKCDR 353
Query: 313 GIEFRTTKGRGGYIRQIVISDA-------ELYNINVAFGACGNCGSHPDDDFD------- 358
GI F+T +GRG I I + D E NIN A+ G S + D
Sbjct: 354 GIRFKTARGRGNVIENIFVRDISMKDITYEAININTAYAGAGIGPSPMVRNIDIRNIRID 413
Query: 359 --PDA--LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
PDA L + + ++I NI + + GI+ A NI L NI L
Sbjct: 414 GVPDAIVLNGLPEKWIENIRMDNIIVTNSEKGIRLARVKNITLENIRLK 462
>gi|299145498|ref|ZP_07038566.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298515989|gb|EFI39870.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 450
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 195/443 (44%), Gaps = 67/443 (15%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
M + L++ L C+ ++ R V + + GA +GKTLNT
Sbjct: 1 MNLRTTLIVFLCFCATTVL-----------------RAERVDMLKAGAKANGKTLNTKLI 43
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ I L GG L+ P+G +LTGS +L S++TL LE GA +L S N D +
Sbjct: 44 NSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFD--DYLPF 98
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW---------------- 164
+ G+ + + ++ LI ++ + G+ GT+DGQG WW
Sbjct: 99 VEVRHEGVMM--KSFQPLIYAVDTENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMR 155
Query: 165 ------------------------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
D+ ++ + RP ++ + + V + + +N+P
Sbjct: 156 DVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPF 215
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+ ++P +C+NV I+ I++ P SP T G+ P+S NV I DC I++G D I++KSG D
Sbjct: 216 WTVNPEFCNNVTIKGITIDNAP-SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDA 274
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G P ++ I + S G V GSEMSG + V + + GI ++T+
Sbjct: 275 QARRLGVPCENITITNCTMLSGHG-GVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTR 333
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI 380
GRGG + I +S+ + NI S + + P + + TN+
Sbjct: 334 GRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKT 393
Query: 381 AGNFTGIQEAPFANICLSNISLS 403
G++EAP ++I L +I +
Sbjct: 394 PIKIVGLEEAPISDIVLRDIHIQ 416
>gi|423298602|ref|ZP_17276658.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
gi|392662345|gb|EIY55906.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
Length = 446
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 194/443 (43%), Gaps = 67/443 (15%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
M + L++ L C+ ++ R V + + GA +GKTLNT
Sbjct: 1 MNLRTTLIVFLCFCATTVL-----------------RAERVDMLKAGAKANGKTLNTKLI 43
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ I L GG L+ P+G +LTGS +L S++TL LE GA +L S N D +
Sbjct: 44 NSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFD--DYLPF 98
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW---------------- 164
+ G+ + + ++ LI ++ + G+ GT+DGQG WW
Sbjct: 99 VEVRHEGVMM--KSFQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMR 155
Query: 165 ------------------------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
D+ ++ + RP ++ + + V + + +N+P
Sbjct: 156 DVNKYQPLWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPF 215
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+ ++P +C NV I+ I++ P SP T G+ P+S NV I DC I++G D I++KSG D
Sbjct: 216 WTVNPEFCDNVTIKGITIDNAP-SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDA 274
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G P ++ I + S G V GSEMSG + V + + GI ++T+
Sbjct: 275 QARRLGVPCENITITNCTMLSGHG-GVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTR 333
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI 380
GRGG + I +S+ + NI S + + P + + TN+
Sbjct: 334 GRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKT 393
Query: 381 AGNFTGIQEAPFANICLSNISLS 403
G++EAP ++I L +I +
Sbjct: 394 PIKIVGLEEAPISDIVLRDIHIQ 416
>gi|393781893|ref|ZP_10370086.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
gi|392674779|gb|EIY68222.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
Length = 509
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 194/436 (44%), Gaps = 77/436 (17%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
VS+ +FGAVG+G L T AF+ AI ++ + +GG L VP+G WLTG L S++ L
Sbjct: 48 KVSLPDFGAVGNGVELCTEAFEKAI---ETLSSRGGGHLIVPAGIWLTGPIVLKSNIDLH 104
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
+EKGAV+L S + + +V+ + L RR +S ++G L +V +TG G IDG
Sbjct: 105 IEKGAVVLFSPDVELYPLVETVFE-----GLDTRRCQSPVSGRNLTNVAITGQ-GAIDGN 158
Query: 160 GSVW------------WD--------------WFS-SQSL-------------------- 172
G W W WF Q+L
Sbjct: 159 GHFWRPLKREKVTESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLTTEEEW 218
Query: 173 ----NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTV 228
++ RP +V I +NV + + F N+PA+N+HP+ C NV I+ + V P +
Sbjct: 219 QSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGD 278
Query: 229 GIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 288
G+ +S N I + +G D I LKSG DE G R +V + + G V
Sbjct: 279 GLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARSCENVVVDGCTVFKGHGGFVV 338
Query: 289 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-------NV 341
GSEMSGG+ NV V + G+ F++ +GRGG + I + + + +I N+
Sbjct: 339 -GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVRNVSMMDIPTEPVTFNL 397
Query: 342 AFGACG-----NCGSHPDDDFDP----DALPAIDQITFKDIIGTNITIAGNFTGIQEAPF 392
+G G DP + P I +++ +N A F GI E P
Sbjct: 398 YYGGKSAVEVLESGEKVPLKVDPLPVDETTPCFRNIHISNLVCSNARRALFFNGIPEMPI 457
Query: 393 ANICLSNISLSINPGS 408
I L N+ ++ G+
Sbjct: 458 DGITLENLDITSQIGA 473
>gi|427384860|ref|ZP_18881365.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
gi|425728121|gb|EKU90980.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
Length = 462
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 215/456 (47%), Gaps = 47/456 (10%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQ--PTLDPRP---HSVSITEFGAVGDGKTL 55
MK ++ +AL A+ I + S D +LDP + IT+FGAVGDGKTL
Sbjct: 2 MKQISLMITSVALTFAMNICAQQSPWDKADAIVQSLDPVTFPDKTYIITDFGAVGDGKTL 61
Query: 56 NTLAFQNAIFYLKSFADKGGAQLYVPSGKW-LTGSFNLTSHLTLFLEKGAVILGSQNPSH 114
F+ AI +D GG ++ VP+G + + G S++ + LEKGA++ S N S
Sbjct: 62 CKEPFEKAITIC---SDNGGGKITVPAGTYYMNGPLVFKSNVNVHLEKGAILDFSTNES- 117
Query: 115 WDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD-WFSSQSLN 173
D + + + G EL Y LI Y ++++ +TG+ GT++G GS + W + Q++
Sbjct: 118 -DYLPAVITRWEGTEL--FNYSPLIYAYHVQNIALTGE-GTVNGNGSKKFSPWNNIQTVE 173
Query: 174 YS-----------------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSN 210
RP +E NV + +T +++P + IHP++CSN
Sbjct: 174 QEMLRKMGRTNVPVYRRVFGEGYKLRPGFIEPFGCANVRIEGVTIIDSPFWVIHPIFCSN 233
Query: 211 VHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTT 270
V ++N++V + + G P+S NV IE C + G DAI++KSG D G+PT
Sbjct: 234 VIVRNVTVDS--HNYNNDGCDPESCRNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTE 291
Query: 271 DVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIV 330
+V IR +S + V GSE++GG+ N+ +E I + S N I F++ RG YI+ +
Sbjct: 292 NVVIRNCSFRSKI-NGVCIGSEIAGGVRNIFIENITIPKSSNAIYFKSNLDRGAYIQDVY 350
Query: 331 ISDAELYNINVAFGACGNCGSHPDDDFDPDALPA--IDQITFKDIIGTNITIAGNFTGIQ 388
+ + + + A F P + I+ +T K I +A G
Sbjct: 351 VRNVQADTVRTALIRFEPNYKGERSAFHPTLFNSFLIENVTCKQSNECGIYMA----GFA 406
Query: 389 EAPFANICLSNISLSINPGSYNSWECSNIHGSSESV 424
E P NI L N+++ P Y NI S +
Sbjct: 407 ERPLQNIVLKNVTIGKVPTPYCFQNGENIRFQSVKI 442
>gi|294645183|ref|ZP_06722905.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808093|ref|ZP_06766866.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|292639470|gb|EFF57766.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444734|gb|EFG13428.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 455
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 194/443 (43%), Gaps = 67/443 (15%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
M + L++ L C+ ++ R V + + GA +GKTLNT
Sbjct: 1 MNLRTTLIVFLCFCATTVL-----------------RAERVDMLKAGAKANGKTLNTKLI 43
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ I L GG L+ P+G +LTGS +L S++TL LE GA +L S N D +
Sbjct: 44 NSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFD--DYLPF 98
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW---------------- 164
+ G+ + + ++ LI ++ + G+ GT+DGQG WW
Sbjct: 99 VEVRHEGVMM--KSFQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMR 155
Query: 165 ------------------------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
D+ ++ + RP ++ + + V + + +N+P
Sbjct: 156 DVNKYQSMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPF 215
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+ ++P +C NV I+ I++ P SP T G+ P+S NV I DC I++G D I++KSG D
Sbjct: 216 WTVNPEFCDNVTIKGITIDNAP-SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDA 274
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G P ++ I + S G V GSEMSG + V + + GI ++T+
Sbjct: 275 QARRLGVPCENITITNCTMLSGHG-GVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTR 333
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI 380
GRGG + I +S+ + NI S + + P + + TN+
Sbjct: 334 GRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKT 393
Query: 381 AGNFTGIQEAPFANICLSNISLS 403
G++EAP ++I L +I +
Sbjct: 394 PIKIVGLEEAPISDIVLRDIHIQ 416
>gi|383122658|ref|ZP_09943350.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
gi|251842244|gb|EES70324.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
Length = 445
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 194/443 (43%), Gaps = 67/443 (15%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
M + + LL L LC+ ++ R V + + GA +GK LNT
Sbjct: 1 MNLRITLLAFLCLCATAIL-----------------RAERVDMLKAGAKANGKALNTKLI 43
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ I L GG L+ P+G +LTGS +L S++TL LE GA +L S N D +
Sbjct: 44 NSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFD--DYLPF 98
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW---------------- 164
+ G+ + + ++ LI ++ + G+ GT+DGQG WW
Sbjct: 99 VEVRHEGVMM--KSFQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMR 155
Query: 165 ------------------------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
D+ S+ + RP ++ + + V + + +N+P
Sbjct: 156 DINKYQPMWDAQNDTTAIYAETNKDYVSTLQRRFFRPPFIQPVRCKKVKIEGVKIVNSPF 215
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+ ++P +C NV I+ I+++ P SP T GI P+S NV I DC I++G D I++KSG D
Sbjct: 216 WTVNPEFCDNVTIKGITINNVP-SPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDA 274
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G P ++ I + S G V GSEMSG + V + + GI ++T+
Sbjct: 275 QARRLGVPCENITITNCTMLSGHG-GVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTR 333
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI 380
GRGG + I +S+ + NI S + + P + + T++
Sbjct: 334 GRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQMPAEAKSERTPIFRNVHISGMTVTDVKT 393
Query: 381 AGNFTGIQEAPFANICLSNISLS 403
G++EAP +I L +I +
Sbjct: 394 PIKIVGLEEAPIFDIVLRDIHIQ 416
>gi|237720811|ref|ZP_04551292.1| polygalacturonase [Bacteroides sp. 2_2_4]
gi|229449646|gb|EEO55437.1| polygalacturonase [Bacteroides sp. 2_2_4]
Length = 455
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 193/443 (43%), Gaps = 67/443 (15%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
M + L + L C+ ++ R V + + GA +GKTLNT
Sbjct: 1 MNLRTTLFVFLCFCATTVL-----------------RAERVDMLKAGAKANGKTLNTKLI 43
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ I L GG L+ P+G +LTGS +L S++TL LE GA +L S N D +
Sbjct: 44 NSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFD--DYLPF 98
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW---------------- 164
+ G+ + + ++ LI ++ + G+ GT+DGQG WW
Sbjct: 99 VEVRHEGVMM--KSFQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMR 155
Query: 165 ------------------------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
D+ ++ + RP ++ + + V + + +N+P
Sbjct: 156 DVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPF 215
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+ ++P +C NV I+ I++ P SP T G+ P+S NV I DC I++G D I++KSG D
Sbjct: 216 WTVNPEFCDNVTIKGITIDNAP-SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDA 274
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G P ++ I + S G V GSEMSG + V + + GI ++T+
Sbjct: 275 QARRLGVPCENITITNCTMLSGHG-GVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTR 333
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI 380
GRGG + I +S+ + NI S + + P + + TN+
Sbjct: 334 GRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKT 393
Query: 381 AGNFTGIQEAPFANICLSNISLS 403
G++EAP ++I L +I +
Sbjct: 394 PIKIVGLEEAPISDIVLRDIHIQ 416
>gi|253573347|ref|ZP_04850690.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251846875|gb|EES74880.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 442
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 175/347 (50%), Gaps = 22/347 (6%)
Query: 71 ADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIEL 130
++ GG + VP+G ++TG+ L SH+ L L GAV+ S NP + VV S G++
Sbjct: 31 SEAGGGTVVVPAGTFVTGAIFLKSHIELRLSPGAVLSFSTNPDDYPVVK---SRWEGVQR 87
Query: 131 PGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSS--QSLNYSRPHLVEFISSENV 188
+ S I G L +V VTG +G I+G G WW+ + + L+Y RP L+ F V
Sbjct: 88 --EVHASCIYGEDLENVTVTG-SGCINGNGQPWWEKQRNRPEELHYPRPKLISFDRCRRV 144
Query: 189 VVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMG 248
+ +++ +++P++ ++P+ C NV I N+S+ P +SP T GI P+S NV I +C I +G
Sbjct: 145 TIRDVSLVDSPSWTVNPIRCHNVTIDNVSILNPADSPNTDGINPESCSNVRISNCHIDVG 204
Query: 249 HDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY 308
D I++K+G +E A P ++ I + G V GSEMSG I NV +
Sbjct: 205 DDCIAIKAGTEE--TAERVPCENITITNCTMIHGHG-GVVIGSEMSGNIRNVTISNCVFQ 261
Query: 309 DSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DDDFDP- 359
+ GI ++ +GRGG + I +S+ + N+ F CG G D + P
Sbjct: 262 HTDRGIRLKSRRGRGGIVEDIRVSNLVMENVICPFIMNLYYFCGPRGKEKYVWDKNPYPV 321
Query: 360 -DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
+ P +I F DI + A F G+ E + + I +S+
Sbjct: 322 TEETPQFRRIHFSDITAREVHAAAGFLYGLAEQYISEVTFDQIEISM 368
>gi|255036065|ref|YP_003086686.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254948821|gb|ACT93521.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 455
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 194/403 (48%), Gaps = 54/403 (13%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R IT+FGAV K + A + AI + GG ++ VP+G+WLTG +L S++
Sbjct: 50 RVKRFLITDFGAVAGDKEKISGAIRQAI---DAANQAGGGKVVVPAGEWLTGKVHLKSNV 106
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
L L+KGAV+L S+ P D + + S GIE Y LI Y ++V +TG+ G +
Sbjct: 107 NLHLDKGAVLLFSEKPE--DYLPAVHSSWEGIEC--YNYSPLIYAYQCKNVAITGE-GEV 161
Query: 157 DGQGSVWWDWFS------------------------SQSLN---YSRPHLVEFISSENVV 189
+ VW +WF+ Q +N + RP ++F ENV+
Sbjct: 162 RAKMEVWKEWFARPKPHMESIKRLYNLAQDYTPVEQRQMVNDTAHLRPQFIQFNRCENVL 221
Query: 190 VSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGH 249
+ T N+P + IHP C NV I + V+A + G+ P+ S NV I DC+ G
Sbjct: 222 MEGFTVTNSPFWTIHPYLCKNVVISRLKVYAHGHN--NDGVDPEMSQNVFITDCVFDQGD 279
Query: 250 DAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYD 309
DAI++KSG + G P+ ++ IR + +++ VA GSE+SGGI NV + + + D
Sbjct: 280 DAIAIKSGRNPEGWRLKTPSKNIVIRNLTVKNGH-QLVAIGSELSGGIENVDISQCQVVD 338
Query: 310 --SLNGIEFRTTKGR-GGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDAL--PA 364
LN + F T R GGY++ I S+ I++ G G D + L
Sbjct: 339 GAKLNHLLFIKTNERMGGYVKNIYASNLTAGKIDL-----GVLGIETDVLYQWRTLVPTK 393
Query: 365 IDQIT-FKDIIGTNITIA-----GNFTGIQEAPFANICLSNIS 401
I ++T DI +NI++ G +E P N+ + NI+
Sbjct: 394 IRKLTPISDIYLSNISVKDVKFESRILGQKELPVKNVSMKNIT 436
>gi|260642326|ref|ZP_05415427.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622463|gb|EEX45334.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 456
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 194/443 (43%), Gaps = 67/443 (15%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
M + L++ L C+ ++ R V + + GA +GKTLNT
Sbjct: 11 MNLRTTLIVFLCFCATTVL-----------------RAERVDMLKAGAKANGKTLNTKLI 53
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ I L GG L+ P+G +LTGS +L S++TL LE GA +L S N D +
Sbjct: 54 NSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFD--DYLPF 108
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW---------------- 164
+ G+ + + ++ LI ++ + G+ GT+DGQG WW
Sbjct: 109 VEVRHEGVMM--KSFQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMR 165
Query: 165 ------------------------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
D+ ++ + RP ++ + + V + + +N+P
Sbjct: 166 DVNKYQPLWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPF 225
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+ ++P +C NV I+ I++ P SP T G+ P+S NV I DC I++G D I++KSG D
Sbjct: 226 WTVNPEFCDNVTIKGITIDNAP-SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDA 284
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G P ++ I + S G V GSEMSG + V + + GI ++T+
Sbjct: 285 QARRLGVPCENITITNCTMLSGHG-GVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTR 343
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI 380
GRGG + I +S+ + NI S + + P + + TN+
Sbjct: 344 GRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKT 403
Query: 381 AGNFTGIQEAPFANICLSNISLS 403
G++EAP ++I L +I +
Sbjct: 404 PIKIVGLEEAPISDIVLRDIHIQ 426
>gi|336402515|ref|ZP_08583249.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
gi|335948128|gb|EGN09853.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
Length = 455
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 193/443 (43%), Gaps = 67/443 (15%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
M + L + L C+ ++ R V + + GA +GKTLNT
Sbjct: 1 MNLRTTLFVFLCFCATTVL-----------------RAERVDMLKAGAKANGKTLNTKLI 43
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ I L GG L+ P+G +LTGS +L S++TL LE GA +L S N D +
Sbjct: 44 NSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFD--DYLPF 98
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW---------------- 164
+ G+ + + ++ LI ++ + G+ GT+DGQG WW
Sbjct: 99 VEVRHEGVMM--KSFQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMR 155
Query: 165 ------------------------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
D+ ++ + RP ++ + + V + + +N+P
Sbjct: 156 DVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPF 215
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+ ++P +C NV I+ I++ P SP T G+ P+S NV I DC I++G D I++KSG D
Sbjct: 216 WTVNPEFCDNVTIKGITIDNAP-SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDA 274
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G P ++ I + S G V GSEMSG + V + + GI ++T+
Sbjct: 275 QARRLGVPCENITITNCTMLSGHG-GVVIGSEMSGSVCKVTISNCVFDGTDRGIRIKSTR 333
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI 380
GRGG + I +S+ + NI S + + P + + TN+
Sbjct: 334 GRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKT 393
Query: 381 AGNFTGIQEAPFANICLSNISLS 403
G++EAP ++I L +I +
Sbjct: 394 PIKIVGLEEAPISDIVLRDIHIQ 416
>gi|390453172|ref|ZP_10238700.1| polygalacturonase [Paenibacillus peoriae KCTC 3763]
Length = 453
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 191/379 (50%), Gaps = 25/379 (6%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ +I ++GA DG T T A NA +++ ++ GG + +PSG + TG+ L S++ L
Sbjct: 2 QAYNIVDYGAPQDGTTPATEAIANA---IEAASNAGGGTVVIPSGTYFTGAIFLKSNIEL 58
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ GA++ S NP+ + VV+ S G++ + S I G L ++ VTG +G ++G
Sbjct: 59 HVSPGAILSFSTNPADYPVVE---SRWEGVQR--EVHASCIYGQNLENISVTG-SGILEG 112
Query: 159 QGSVWWDWFSS--QSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
G WW+ + + L Y RP L+ F + V + ++ N+P++ ++P+ C NV I N+
Sbjct: 113 NGQPWWEKHRNHPEDLQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNL 172
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
S+ P +SP T GI P+S NV I +C I +G D I++K+G ++ ++ I
Sbjct: 173 SILNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERIA--CENITITN 230
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ G V GSEMSG I NV + + GI ++ +GRGG I I +S+ +
Sbjct: 231 CTMVHGHG-GVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRVSNIVM 289
Query: 337 YNINVAF--GACGNCGSHPDD----DFDP----DALPAIDQITFKDIIGTNITIAGNFT- 385
+ F CG D D +P D P+ +I F DI + A F
Sbjct: 290 EEVICPFILNLYYFCGPRGKDKYVWDKNPYPVTDETPSFRRIHFSDITARQVHAAAGFLY 349
Query: 386 GIQEAPFANICLSNISLSI 404
G+ E A I SNI +S+
Sbjct: 350 GLAEQYIAEITFSNIDISM 368
>gi|392939365|ref|ZP_10305009.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
gi|392291115|gb|EIV99558.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
Length = 519
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 187/391 (47%), Gaps = 32/391 (8%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V++ +FGA GDGKT++T Q AI+ G +++ P G +LTG L S++TL L
Sbjct: 85 VNVRDFGAKGDGKTIDTSFIQAAIYSCPE-----GGRVFFPGGIYLTGPIFLKSNITLEL 139
Query: 101 EKGAVILGSQNPSHWDVV-DPLPSYGRGIEL--------PGRRYKSLINGYMLRDVVVTG 151
K AV+LG+ + + + ++ + + S EL + SLI G + +V + G
Sbjct: 140 SKDAVLLGANDRNLYPILPNTIKSQNSDEELYLATWEGEAAECFASLITGINIENVNIIG 199
Query: 152 DNGTIDGQGS--VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
+ GTIDG + WW + + RP V +N+++ +T N+PA+ IHP
Sbjct: 200 E-GTIDGNANFETWWKEHKIKKGAW-RPRTVFLNQCKNILIEGVTIKNSPAWTIHPFQSE 257
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
N+ N+++ P SP T G+ P++S NV I C ++G D I++K+G + G+ T
Sbjct: 258 NLKFINLTIENPKNSPNTDGLNPEASKNVLILGCKFSVGDDCIAIKAGKFDMAQKLGKLT 317
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQI 329
V +R ++ G V GSEMSGG+ V VEK ++ GI +T +GRGG+I +I
Sbjct: 318 EKVFVRNCYMEYGHG-GVVIGSEMSGGVKEVYVEKCIFNNTDRGIRIKTRRGRGGFIDEI 376
Query: 330 VISDAELYNINVAF-----------GACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNI 378
+ + F G S D + P I I K+I T+
Sbjct: 377 HADKIRMNRVKTPFTINSFYFCDVDGKTEYVWSKEKLPID-ERTPYIGNIYLKNINCTDT 435
Query: 379 TIAGNFT-GIQEAPFANICLSNISLSINPGS 408
+A F G+ E + + I + + +
Sbjct: 436 QVAAGFIYGLPERKIEKVIMEEIYVDFDQNA 466
>gi|397691340|ref|YP_006528594.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
gi|395812832|gb|AFN75581.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
Length = 495
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 200/426 (46%), Gaps = 87/426 (20%)
Query: 54 TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPS 113
T NT A AI + ++ GG ++ VP+G WLTG + S++ LFLEKGA+I ++N
Sbjct: 2 TKNTDAINKAI---AACSENGGGKVIVPAGIWLTGPIEMKSNVNLFLEKGAMIQFTKNFD 58
Query: 114 HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVW---------- 163
+ +V L +Y G E R +S I+G+ L ++ +TG G IDG G W
Sbjct: 59 DYPLV--LTTY-EGTEQ--YRCQSPISGWNLENIAITG-YGVIDGGGDAWRYVKKSKLTE 112
Query: 164 --WD---------------WFSSQSLN-------------------------YSRPHLVE 181
W W S Q++N Y RP +V
Sbjct: 113 SQWKKLVSSGGVVDKKNQWWPSEQAMNGQRILDSLLEANGELTKEDYRKVRDYLRPVMVN 172
Query: 182 FISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIE 241
+ +N+++ +TF N+PA+NIHP+ N+ ++N++V P S GI +S NV I
Sbjct: 173 LVKCKNILLEGVTFQNSPAWNIHPLMSENIILKNVTVRNPWYSQNGDGIDVESCKNVVIY 232
Query: 242 DCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQ 301
DC +G DAI +KSG +E+G G PT +V I ++ G GSEMSGG+ N++
Sbjct: 233 DCKFDVGDDAICMKSGKNEFGRKRGIPTENVIIADCIVYHGHG-GFTIGSEMSGGVRNIK 291
Query: 302 VEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-------NVAFGACGNCGSHPD 354
V + + G+ F++T+GRGG + I I + + +I N+ +G G P
Sbjct: 292 VTNCNFIGTDIGLRFKSTRGRGGVVENIYIDNIYMKDIPTEALSFNMYYG-----GQAPT 346
Query: 355 DD------FDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSNIS 401
+D + +D+ T F++I +I G G+ E NI L+N+
Sbjct: 347 EDIPLAEKLKNRKVLNVDETTPQFRNIFLNDIYCIGAEDAVIIQGLPEMKIKNIVLNNVV 406
Query: 402 LSINPG 407
++ G
Sbjct: 407 MTSKRG 412
>gi|332299163|ref|YP_004441085.1| Polygalacturonase [Treponema brennaborense DSM 12168]
gi|332182266|gb|AEE17954.1| Polygalacturonase [Treponema brennaborense DSM 12168]
Length = 449
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 183/403 (45%), Gaps = 54/403 (13%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+++ FGA DG N AF A+ L + GG L VP+G W TG L + +TL
Sbjct: 3 ELNLKNFGAKADGIYNNAAAFAEAVSVLH---EAGGGTLTVPAGIWKTGPIRLCAKMTLH 59
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
L +GAV+ +P + P Y R + ++ + V VTG G IDG
Sbjct: 60 LAEGAVLRFIPDPELYP-----PVYTRWEGVECYAMQACLYCADSDSVTVTG-KGVIDGS 113
Query: 160 GSVWWD--W----------------------FSSQ-------SLNYSRPHLVEFISSENV 188
G WWD W + SQ + + RP LV+F + NV
Sbjct: 114 GDTWWDLRWQKADQGGPKSPIECKLAALNPGYRSQPGGGGGREVQFLRPALVQFYNCTNV 173
Query: 189 VVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMG 248
+ +T N+P + +HPVYC N+ ++ I++ P ++P T GI DS NV I DC +++G
Sbjct: 174 RLEQVTLENSPFWTVHPVYCDNLLVRGITIQNPKDAPNTDGIDIDSCTNVQIVDCEVSVG 233
Query: 249 HDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY 308
D I+LKSG E GI RPT +V +R ++ + G V GSE + GI +V E
Sbjct: 234 DDGIALKSGSGEDGIRVNRPTRNVTVRGCTVRDAHGGMV-IGSETAAGIRHVLAENCRFP 292
Query: 309 DSLNGIEFRTTKGRGGYIRQIVISDAELYN--INVAFGACGNCGSHPDDD--FDPDALPA 364
+ G+ ++ +GRGG I + + + + + +A CG F DA P
Sbjct: 293 GTDRGVRIKSRRGRGGEIYDVKLRNLVMEDNLCPIAINMYYKCGETDPKSPLFSLDAQPV 352
Query: 365 ID--------QITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
D +IT G + AG G+ E+P N+ + +
Sbjct: 353 TDSTPHVHDVEITGVRASGCKAS-AGFIAGLPESPVGNLVIKD 394
>gi|329964701|ref|ZP_08301755.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328525101|gb|EGF52153.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 506
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 141/485 (29%), Positives = 218/485 (44%), Gaps = 90/485 (18%)
Query: 3 MPVALLLLLALCSAILINGEVSDGQCD----DQPTLDPR-------PHSVSITEFGAVGD 51
M L ++ +C IL + + ++ + + D P PR +V++ +FGAVG+
Sbjct: 1 MTKQLYVIATICLWILCSCQSAEYKYEAVYRDLPFDMPRVVAPEFPDRTVNLKDFGAVGN 60
Query: 52 GKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQN 111
GK L T AF +AI + + +GG L VP+G W TG L S++ L LEKGAVIL S +
Sbjct: 61 GKDLCTEAFASAI---NTLSGQGGGHLIVPAGVWFTGPIVLKSNIDLHLEKGAVILFSPD 117
Query: 112 PSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVW-------- 163
+ +V+ + L RR +S I+G L +V +TG+ G IDG G W
Sbjct: 118 VDLYPLVETVFE-----GLDTRRCQSPISGRNLENVAITGE-GAIDGNGHFWRPLKREKV 171
Query: 164 ----WD--------------WF------------------------SSQSL-NYSRPHLV 180
W WF QS+ ++ RP +V
Sbjct: 172 TESVWKQTVSRGGVYKRPTYWFPYPETLKGDTISNMNVPRHLITEEEWQSVRHFLRPVMV 231
Query: 181 EFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCI 240
I NV + + F N+PA+N+HP+ C NV ++ + V P + G+ +S N I
Sbjct: 232 SLIECRNVWLQGVIFQNSPAWNLHPLMCENVLVEEVQVRNPSYAQNGDGLDLESCRNALI 291
Query: 241 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 300
+ +G D I LKSG DE G R +V + + G V GSEMSGG+ NV
Sbjct: 292 VNSTFDVGDDGICLKSGKDEDGRRRARVCENVVVDGCTVFKGHGGFVV-GSEMSGGVRNV 350
Query: 301 QVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-------NVAFGACGNCGSHP 353
V + G+ F++ +GRGG + I +++ + +I N+ +G
Sbjct: 351 SVSNCQFLGTDVGLRFKSKRGRGGIVENIWVTNVSMMDIPTEPITFNLYYGGKSAVEVLE 410
Query: 354 DDDFDP---DALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSNISLS 403
+ P + LP +D+ T F++I N+ AG F GI E P I L +I ++
Sbjct: 411 SGETVPAKVEPLP-VDETTPCFRNIHVRNLVCAGARRALFFNGIPEMPIDGIVLEDIDIT 469
Query: 404 INPGS 408
G+
Sbjct: 470 SRLGA 474
>gi|423213419|ref|ZP_17199948.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693879|gb|EIY87109.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
Length = 450
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 194/443 (43%), Gaps = 67/443 (15%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
M + L++ L C+ ++ R V + + GA +GKTLNT
Sbjct: 1 MNLRTTLIVFLCFCATTVL-----------------RAERVDMLKAGAKANGKTLNTKLI 43
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ I L GG L+ P+G +LTGS +L S++TL LE GA +L S N D +
Sbjct: 44 NSTIDRLNR---GGGGTLFFPAGIYLTGSIHLKSNITLELEAGATLLFSDNFD--DYLPF 98
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW---------------- 164
+ G+ + + ++ LI ++ + G+ GT+DGQG WW
Sbjct: 99 VEVRHEGVMM--KSFQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMR 155
Query: 165 ------------------------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
D+ ++ + RP ++ + + V + + +N+P
Sbjct: 156 DVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPF 215
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+ ++P +C NV I+ I++ P SP T G+ P+S NV I DC I++G D I++KSG D
Sbjct: 216 WTVNPEFCDNVTIKGITIDNAP-SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDA 274
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G P ++ I + S G V GSEMSG + V + + GI ++T+
Sbjct: 275 QARRLGVPCENITITNCTMLSGHG-GVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTR 333
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI 380
GRGG + I +S+ + NI S + + P + + TN+
Sbjct: 334 GRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKT 393
Query: 381 AGNFTGIQEAPFANICLSNISLS 403
G++EAP ++I L +I +
Sbjct: 394 PIKIVGLEEAPISDIVLRDIHIQ 416
>gi|298481339|ref|ZP_06999532.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298272543|gb|EFI14111.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 464
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 193/443 (43%), Gaps = 67/443 (15%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
M + L + L C+ ++ R V + + GA +GKTLNT
Sbjct: 10 MNLRTTLFVFLCFCATTVL-----------------RAERVDMLKAGAKANGKTLNTKLI 52
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ I L GG L+ P+G +LTGS +L S++TL LE GA +L S N D +
Sbjct: 53 NSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFD--DYLPF 107
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW---------------- 164
+ G+ + + ++ LI ++ + G+ GT+DGQG WW
Sbjct: 108 VEVRHEGVMM--KSFQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMR 164
Query: 165 ------------------------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
D+ ++ + RP ++ + + V + + +N+P
Sbjct: 165 DVNKYQSMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPF 224
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+ ++P +C NV I+ I++ P SP T G+ P+S NV I DC I++G D I++KSG D
Sbjct: 225 WTVNPEFCDNVTIKGITIDNAP-SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDA 283
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G P ++ I + S G V GSEMSG + V + + GI ++T+
Sbjct: 284 QARRLGVPCENITITNCTMLSGHG-GVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTR 342
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI 380
GRGG + I +S+ + NI S + + P + + TN+
Sbjct: 343 GRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKT 402
Query: 381 AGNFTGIQEAPFANICLSNISLS 403
G++EAP ++I L +I +
Sbjct: 403 PIKIVGLEEAPISDIVLRDIHIQ 425
>gi|430837653|ref|ZP_19455615.1| polygalacturonase [Enterococcus faecium E0680]
gi|430840334|ref|ZP_19458261.1| polygalacturonase [Enterococcus faecium E0688]
gi|430859274|ref|ZP_19476887.1| polygalacturonase [Enterococcus faecium E1552]
gi|430487167|gb|ELA63937.1| polygalacturonase [Enterococcus faecium E0680]
gi|430489820|gb|ELA66395.1| polygalacturonase [Enterococcus faecium E0688]
gi|430544018|gb|ELA84068.1| polygalacturonase [Enterococcus faecium E1552]
Length = 445
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 174/345 (50%), Gaps = 24/345 (6%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP+G++LTG+ L S++ L L GAV+ S +P + VV + R + +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ--SLNYSRPHLVEFISSENVVVS 191
Y S I + ++ VTG GT+DG G WW F ++ +L Y RP L+ F + + V
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
N+ + +P++ I+P+ CSN N+++ P +SP T GI P+S NV I +C I +G D
Sbjct: 144 NIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 252 ISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++K+G ++ Y R ++ I + G V GSEMSG I N+ + ++
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DDDFDP--D 360
GI ++ +GRGG + I +S+ + N+ F CG G P + P +
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDE 319
Query: 361 ALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
PA +I F +I N+ + F G+ E I NI +S+
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSM 364
>gi|295103112|emb|CBL00656.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 518
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 197/396 (49%), Gaps = 40/396 (10%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V +G V DG+T NT+ Q A+ S KGG +YVP+G++ T S + S+ TL+L
Sbjct: 82 VDAARYGLVADGETDNTVRLQAAL----STCPKGGT-VYVPAGRYRTASLFMKSNTTLYL 136
Query: 101 EKGAVILGSQNPSHWDVV-DPLPSYGRGIEL--------PGRRYKSLINGYMLRDVVVTG 151
EKGAV+LG + +H+ ++ LPS E P + L+N + DVVVTG
Sbjct: 137 EKGAVLLGDNDRTHYPILPGVLPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTG 196
Query: 152 DNGTID--GQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
+ GT+D Q WW + + + RP V + SENV + +T N+ ++ IHP++
Sbjct: 197 E-GTLDCDAQNGDWWVNPKVKRIAW-RPRAVAAVDSENVCLHGITVQNSFSWTIHPIFVK 254
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
++ + N +++ P +P T GI P+S + + I I +G D I++K+ G+ R
Sbjct: 255 HLDLLNFNINNPYNAPNTDGIDPESCEYIRIIGMNIHVGDDCIAMKASKVFLGMKLKRSC 314
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIR 327
IR LL G + GSEMSGG+ ++ V + + + G+ +T +GRG I
Sbjct: 315 EHTVIRNCLLDKGHG-GIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVID 373
Query: 328 QIVISDAELYNINVAF-------------GACGNCG-SHPDDDFDPDALPAIDQITFKDI 373
+V + E+ + F G C + P D++ P + +T ++I
Sbjct: 374 GLVFRNVEMRGVKAPFVINMFYFCDPDGHGPYVQCREAMPVDEY----TPKLGSLTMENI 429
Query: 374 IGTNITIAG-NFTGIQEAPFANICLSNISLSINPGS 408
+ T+ AG F G+ E P + + ++S++ +P +
Sbjct: 430 VATDAQFAGCYFDGLPEQPIERVTMRDVSITFDPNA 465
>gi|262408002|ref|ZP_06084550.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|293369111|ref|ZP_06615706.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336416263|ref|ZP_08596599.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345511524|ref|ZP_08791064.1| polygalacturonase [Bacteroides sp. D1]
gi|423286902|ref|ZP_17265753.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
gi|262354810|gb|EEZ03902.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|292635823|gb|EFF54320.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335938994|gb|EGN00873.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345454069|gb|EEO49839.2| polygalacturonase [Bacteroides sp. D1]
gi|392674440|gb|EIY67888.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
Length = 450
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 193/443 (43%), Gaps = 67/443 (15%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
M + L + L C+ ++ R V + + GA +GKTLNT
Sbjct: 1 MNLRTTLFVFLCFCATTVL-----------------RAERVDMLKAGAKANGKTLNTKLI 43
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ I L GG L+ P+G +LTGS +L S++TL LE GA +L S N D +
Sbjct: 44 NSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFD--DYLPF 98
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW---------------- 164
+ G+ + + ++ LI ++ + G+ GT+DGQG WW
Sbjct: 99 VEVRHEGVMM--KSFQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMR 155
Query: 165 ------------------------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
D+ ++ + RP ++ + + V + + +N+P
Sbjct: 156 DVNKYQSMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPF 215
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+ ++P +C NV I+ I++ P SP T G+ P+S NV I DC I++G D I++KSG D
Sbjct: 216 WTVNPEFCDNVTIKGITIDNAP-SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDA 274
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G P ++ I + S G V GSEMSG + V + + GI ++T+
Sbjct: 275 QARRLGVPCENITITNCTMLSGHG-GVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTR 333
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI 380
GRGG + I +S+ + NI S + + P + + TN+
Sbjct: 334 GRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPVEPKSERTPIFRNVHISGMTVTNVKT 393
Query: 381 AGNFTGIQEAPFANICLSNISLS 403
G++EAP ++I L +I +
Sbjct: 394 PIKIVGLEEAPISDIVLRDIHIQ 416
>gi|160886115|ref|ZP_02067118.1| hypothetical protein BACOVA_04122 [Bacteroides ovatus ATCC 8483]
gi|156108928|gb|EDO10673.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 459
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 193/443 (43%), Gaps = 67/443 (15%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
M + L + L C+ ++ R V + + GA +GKTLNT
Sbjct: 10 MNLRTTLFVFLCFCATTVL-----------------RAERVDMLKAGAKANGKTLNTKLI 52
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ I L GG L+ P+G +LTGS +L S++TL LE GA +L S N D +
Sbjct: 53 NSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFD--DYLPF 107
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW---------------- 164
+ G+ + + ++ LI ++ + G+ GT+DGQG WW
Sbjct: 108 VEVRHEGVMM--KSFQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMR 164
Query: 165 ------------------------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
D+ ++ + RP ++ + + V + + +N+P
Sbjct: 165 DVNKYQSMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPF 224
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+ ++P +C NV I+ I++ P SP T G+ P+S NV I DC I++G D I++KSG D
Sbjct: 225 WTVNPEFCDNVTIKGITIDNAP-SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDA 283
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G P ++ I + S G V GSEMSG + V + + GI ++T+
Sbjct: 284 QARRLGVPCENITITNCTMLSGHG-GVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTR 342
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI 380
GRGG + I +S+ + NI S + + P + + TN+
Sbjct: 343 GRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPVEPKSERTPIFRNVHISGMTVTNVKT 402
Query: 381 AGNFTGIQEAPFANICLSNISLS 403
G++EAP ++I L +I +
Sbjct: 403 PIKIVGLEEAPISDIVLRDIHIQ 425
>gi|325679916|ref|ZP_08159485.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
gi|324108354|gb|EGC02601.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
Length = 513
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 194/395 (49%), Gaps = 46/395 (11%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+VS+ +FGAVGDG +TL+ Q A+ L + G +L P G +LTG NL SH+T+
Sbjct: 76 AVSVKDFGAVGDGVADDTLSIQTAVNCLPA-----GGRLRFPEGTYLTGPINLKSHITIE 130
Query: 100 LEKGAVILGSQNPSHW----DVVDPLPS-----YG--RGIELPGRRYKSLINGYMLRDVV 148
+ A +LG+ + + + V+ L + +G G +P +++L+ D+
Sbjct: 131 FTEKATLLGTTDMARYPKIPGVITDLVTGEEVHFGTWEGNAVP--MHQALLFAEYAEDIK 188
Query: 149 VTGDNGTIDG--QGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
+ G GT+DG Q S WW +Q + RP L+ F + V V +T NA ++ +HP
Sbjct: 189 IVG-RGTVDGNAQNSQWWVDVKNQEV--PRPRLIFFNRCKLVTVHGITAQNAASWQLHPY 245
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
+ + + ++SV+AP +SP T + P++ D V I C ++G D I++KSG E G +
Sbjct: 246 FSTELQFLDLSVNAPKDSPNTDALDPEACDTVNIVGCRFSVGDDCIAIKSGKIEIGRKFK 305
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
+P IR ++Q G ++ GSEM+GG+ N+ V + ++ G+ +T +GRG
Sbjct: 306 QPANRHTIRNCIMQFGHG-AITLGSEMAGGVKNLSVSRCIFKETDRGLRIKTRRGRG--- 361
Query: 327 RQIVISDAELYNIN-------VAFGACGNCGSHPDDDFD----------PDALPAIDQIT 369
+ VI E NI + NC PD + D P + + T
Sbjct: 362 KDAVIDGIEFKNIKMDGVLTPIVMNMWYNC-CDPDRYSEYNTTREKLPVDDRTPYLGKFT 420
Query: 370 FKDIIGTNITIAGNFT-GIQEAPFANICLSNISLS 403
F+D+ N +A + G+ E P I + NI +
Sbjct: 421 FRDMECLNCHVAACYCDGLPEMPIDEITVDNIKFT 455
>gi|313114438|ref|ZP_07799963.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623236|gb|EFQ06666.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 510
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 197/396 (49%), Gaps = 40/396 (10%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V + +G V DG T NTL Q A+ S KGG +YVP+G++ T S L S+ TL+L
Sbjct: 74 VDASRYGLVADGTTDNTLKLQAAL----STCPKGGT-VYVPAGRYRTCSLFLKSNTTLYL 128
Query: 101 EKGAVILGSQNPSHWDVV-DPLPSYGRGIEL--------PGRRYKSLINGYMLRDVVVTG 151
EKGAV+LG + +H+ ++ +PS E P + L+N + DVVVTG
Sbjct: 129 EKGAVLLGDNDRTHYPILPGVIPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTG 188
Query: 152 DNGTID--GQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
+ GT+D + WW + + + RP V + SEN+ + +T N+ ++ IHP++
Sbjct: 189 E-GTLDCDAENGDWWVTPKIKRIAW-RPRAVAAVDSENICLHGITVQNSYSWTIHPIFVK 246
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
++ + N +++ P +P T GI P+S + + I I +G D I++K+ G+ +
Sbjct: 247 HLDLLNFNINNPYNAPNTDGIDPESCEYIRIIGVNIHVGDDCIAMKASKVFLGMKLKKSC 306
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIR 327
IR LL G + GSEMSGG+ ++ V + + + G+ +T +GRG I
Sbjct: 307 EHTVIRNCLLDKGHG-GIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVID 365
Query: 328 QIVISDAELYNINVAF-------------GACGNC-GSHPDDDFDPDALPAIDQITFKDI 373
+V + E+ + F G C + P D++ P + +T +DI
Sbjct: 366 GLVFRNVEMRGVKAPFVINMFYFCDPDGHGPYVQCRDAMPVDEY----TPKLGSLTMEDI 421
Query: 374 IGTNITIAG-NFTGIQEAPFANICLSNISLSINPGS 408
+ T+ AG F G+ E P + + N++++ +P +
Sbjct: 422 VATDAQFAGCYFDGLPEQPIERVSMKNVTITFDPNA 457
>gi|298385760|ref|ZP_06995318.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298261901|gb|EFI04767.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 445
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 194/443 (43%), Gaps = 67/443 (15%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
M + + LL L LC+ ++ R V + + GA +GK LNT
Sbjct: 1 MNLRITLLAFLCLCATAIL-----------------RAERVDMLKAGAKANGKALNTKLI 43
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ I L GG L+ P+G +LTGS +L S++TL LE GA +L S N D +
Sbjct: 44 NSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFD--DYLPF 98
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW---------------- 164
+ G+ + + ++ LI ++ + G+ GT+DGQG WW
Sbjct: 99 VEVRHEGVMM--KSFQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMR 155
Query: 165 ------------------------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
D+ S+ + RP ++ + + V + + +N+P
Sbjct: 156 DVNKYQPMWDAQNDTTAIYAETNKDYVSTLQRRFFRPPFIQPVRCKKVKIEGVKIVNSPF 215
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+ ++P +C NV I+ I+++ P SP T GI P+S NV I DC I++G D I++KSG D
Sbjct: 216 WTVNPEFCDNVTIKGITINNVP-SPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDA 274
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G P ++ I + + G V GSEMSG + V + + GI ++T+
Sbjct: 275 QARRLGVPCENITITNCTMLAGHG-GVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTR 333
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI 380
GRGG + I +S+ + NI S + + P + + T+
Sbjct: 334 GRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQMPAEAKSERTPIFRNVHISGMTVTDAKT 393
Query: 381 AGNFTGIQEAPFANICLSNISLS 403
G++EAP ++I L +I +
Sbjct: 394 PIKIVGLEEAPISDIVLRDIHIQ 416
>gi|325106419|ref|YP_004276073.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975267|gb|ADY54251.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 554
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 197/437 (45%), Gaps = 77/437 (17%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V IT+FG +GDG LNT AF AI + + KGG L VP+G WLTG S++ L
Sbjct: 45 NKVKITDFGGIGDGIYLNTQAFSKAI---DALSAKGGGMLTVPAGIWLTGPIQFKSNINL 101
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LE A+IL S + + + +V+ + G++ RR +S I G L ++ +TG +G IDG
Sbjct: 102 HLEDRAIILFSPDKNLYPIVE---TSFEGLDT--RRCQSPIWGKNLTNIAITG-SGAIDG 155
Query: 159 QGSVW------------WD--------------WF-SSQSL------------------- 172
G W W W S+Q L
Sbjct: 156 NGQFWRPLKKQKVTESFWKKTVSGGGVFKRSDYWMPSAQYLHGDTISDMNVPRHFKTDEE 215
Query: 173 -----NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
++ RP +V F +NV + + F N+PA+NIHP+ C NV I I V P +
Sbjct: 216 WQSVRDFLRPVMVSFRECKNVYLQGVIFQNSPAWNIHPLMCENVIIDGIQVRNPSYAQNG 275
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV 287
G+ +S NV + + +G D I LKSG +E G G P +V + + G V
Sbjct: 276 DGLDLESCKNVIVVNSSFDVGDDGICLKSGKNEDGRKRGMPCENVIVDNCTVFKGHGGFV 335
Query: 288 AFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-------N 340
GSEMSGG+ N+ V + G+ F++ +GRGG + I IS+ + +I N
Sbjct: 336 V-GSEMSGGVRNISVTNCQFLGTDVGLRFKSNRGRGGVVENIFISNISMIDIATEPLHFN 394
Query: 341 VAFGACGNCGSHPDDD--FDPDALPAIDQI--TFKDIIGTNI-----TIAGNFTGIQEAP 391
+ +G D + LP +D+ TFK+I N+ A F G+ E
Sbjct: 395 LYYGGKSAVEELEDGTKIVRQEKLPPVDETTPTFKNITIKNVYCSEANKAMYFYGLPEHN 454
Query: 392 FANICLSNISLSINPGS 408
N+ + N + N G+
Sbjct: 455 IKNLQIENFVVHSNQGA 471
>gi|412993465|emb|CCO13976.1| predicted protein [Bathycoccus prasinos]
Length = 635
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 188/398 (47%), Gaps = 37/398 (9%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V++ GAVGDG T+NT QNA+ L A L P G+WLTG L S++ + L
Sbjct: 194 VNVALAGAVGDGMTVNTETIQNALDSLTMKAQGRTQTLAFPPGRWLTGPLELKSNVKIVL 253
Query: 101 EKGAVILGS-QNPSHWDVVD-----PLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
+ L + ++ W + D LPS + P +++ I+ Y ++ ++G G
Sbjct: 254 DGPRSFLEAVKSTDLWPIDDWKEHPSLPS-----DDPTPIFRAFIHAYNQTNIEISG-GG 307
Query: 155 TIDGQGSVWWDWFSSQSLNYSR------PHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
TI+G G WWD + Q + S P+LV + +V + N+ N+P + + P YC
Sbjct: 308 TINGHGDFWWDRKTDQKYSPSMRKKAHVPNLVHLVGCSDVKIENIVLTNSPHFTVRPQYC 367
Query: 209 SNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMG--HDAISLKSGWDEYGIAYG 266
+ V + I + P SP T G+V DS+ N + D I G DA+++KSG D +G
Sbjct: 368 NKVSVSRIHISNPANSPGTNGVVFDSTSNSFLRDSFITTGDKEDAVAIKSGKDYHGRKAN 427
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG------IEFRTTK 320
P+ ++ + V + G +++ GSEMSGG+SN+ I +D N +T +
Sbjct: 428 VPSKNIRVEHVTIL--GGHALSVGSEMSGGVSNIIFSDI-TFDGRNNKFGVGSARVKTMR 484
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP---DALPAIDQITFKDIIGTN 377
GRGG + QI + +N A S D + P + P + I FK++
Sbjct: 485 GRGGVVDQITFQNIRGWNALYAL-ELYEYYSKQDTNVGPVSREETPIVKNINFKNVHIEG 543
Query: 378 IT-IAGNFTGIQEAPFANICLSNISLSINPGSYNSWEC 414
I AG G+ E +N+ + N+ L+ + W C
Sbjct: 544 IKRYAGVIAGLPEMAVSNLVIENVHLT---NVHKGWNC 578
>gi|409099480|ref|ZP_11219504.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 530
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 201/427 (47%), Gaps = 41/427 (9%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++T++GA D L T+A + AI + + GG +Y P+GK+LTG+ +L S++T+F++
Sbjct: 32 NVTKYGAKNDSSKLATVAIKKAI---DAASKAGGGTVYFPAGKYLTGAIHLKSNITIFID 88
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GA + S N D + + S G+++ + + L Y ++ + G G IDG G
Sbjct: 89 AGAELHFSDNFD--DYLPMVESRYEGVDV--KSFSPLFYAYKAENISIIG-RGLIDGHGK 143
Query: 162 VWWDW--------------FSSQSLN---------------YSRPHLVEFISSENVVVSN 192
WWD+ + LN + RP ++ + +NV++
Sbjct: 144 KWWDFVEGYKEGQARSKWQYEFDKLNKDIVLPDDPKQMKRGFLRPPFIQTMFCKNVLIDG 203
Query: 193 LTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAI 252
+T N+P + ++P + NV I ++++ P SP T GI P+S NV I DC I++G D I
Sbjct: 204 ITIRNSPFWTVNPEFSENVKIHAVTINNP-HSPNTDGINPESCKNVHISDCHISVGDDCI 262
Query: 253 SLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN 312
++KSG DE G P + I + S G V GSEMSG + + + +
Sbjct: 263 TIKSGKDEPGRRMAIPAENYVITNCTMLSGHG-GVVIGSEMSGDVRKITISNCVFDGTDR 321
Query: 313 GIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKD 372
GI +T +GRGG + +I +S+ + +I + + D P I F +
Sbjct: 322 GIRIKTARGRGGIVEEIRVSNIIMKDIKQQAIVLDMQYAKTNVQPVSDRTPKFRNIHFSN 381
Query: 373 IIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPEL 432
I G + A G++E P NI ++I++ G S+ + I + V E P L
Sbjct: 382 ITG-QVNQAAYLNGLEEMPIENITFNDINMEAKTGFDISF-SNRIEFHNVQVNTELGPSL 439
Query: 433 ENSSSNS 439
+ S N+
Sbjct: 440 KASRVNN 446
>gi|347530390|ref|YP_004837153.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345500538|gb|AEN95221.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
Length = 382
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 173/376 (46%), Gaps = 34/376 (9%)
Query: 53 KTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNP 112
+ + T QN I G + VP G+W +G+ +L S++ L+LE+G VI S
Sbjct: 4 RCVYTEGNQNVIQEAVDRLPASGGTVIVPRGEWKSGAIHLKSNVKLYLEEGCVIHFSSCM 63
Query: 113 SHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQS- 171
D + P+ + G+E Y LI +V + G G +DG GS WW W Q
Sbjct: 64 E--DYLPPVFTRWEGVEC--YNYSPLIYAADCENVTICG-TGVLDGAGSAWWHWKKLQQN 118
Query: 172 -----------------------LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
+ RP ++FI+ ++V + + T + P + IHPVYC
Sbjct: 119 AADHLIRAESQEIPVEERIFATRKDALRPSFIQFINCKHVTLEDFTIEDGPQWTIHPVYC 178
Query: 209 SNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRP 268
+V ++ ++V+ + P T G PDS V IEDC G D I++ SG +E G GRP
Sbjct: 179 EDVVVRGVTVNT--KGPNTDGCNPDSCRKVLIEDCTFETGDDCIAINSGMNEDGWRVGRP 236
Query: 269 TTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQ 328
+ ++ ++VA GS MSGGI ++ + + GI ++ +GRGGY+++
Sbjct: 237 CEQIEVKNCRFIGGH-AAVAIGSGMSGGICDIWIHDCVARGTERGIRIKSMRGRGGYVKR 295
Query: 329 IVISDAELYNINV-AFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGI 387
+ + ++ I A N GS A P ++ F I G + I + G+
Sbjct: 296 VNVERMQMDEIEKEAIEVSMNYGSSTAVPVSQKA-PEFSELRFAHIRGNHAAIGVSLCGL 354
Query: 388 QEAPFANICLSNISLS 403
E+P I L ++S++
Sbjct: 355 PESPLREITLEDVSIA 370
>gi|284005877|ref|YP_003391696.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
gi|283821061|gb|ADB42897.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 390
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 180/386 (46%), Gaps = 40/386 (10%)
Query: 28 CDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLT 87
C Q +P P SV++ + DG T + Q I S GG L VP+G++L
Sbjct: 5 CSPQAQSNPTPTSVTLH---LLADGTTDQAKSLQQTI---DSCGATGGGTLIVPAGRYLI 58
Query: 88 GSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDV 147
+L S + L L GA +L S N + D LP+ LING L DV
Sbjct: 59 SPISLCSRVNLQLASGATLLASTNAA--DYTPKLPN--------------LINGDSLTDV 102
Query: 148 VVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
+TG GTIDG G+VWW F +RP L+ S NV + LT +N+P++++ P
Sbjct: 103 SLTG-TGTIDGNGAVWWQRFIDSGKTLNRPRLIYLTRSRNVTIDGLTLINSPSFHLVPSQ 161
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
C NV IQN+++ AP +SP T GI P + +V I++C I G D I++K G I +
Sbjct: 162 CQNVTIQNLTITAPSDSPNTDGIDPANCTHVLIQNCTIDNGDDNIAIKGGRSNGQIV--Q 219
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
P D+ IR G SV + +S+V V + NGI ++ G GG I+
Sbjct: 220 PCQDIQIRNCRFLHGHGLSVGSETSSG--VSSVSVTNCTFTGTTNGIRIKSQPGLGGAIQ 277
Query: 328 QIVISDAELYN------INVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIA 381
+ S + N I++A+ N G D +P++ +T + T A
Sbjct: 278 NLSYSQITMTNVTNPLIIDLAYSLNNNNGYASD-------IPSVSGLTIDQLSVTGAKNA 330
Query: 382 GNFTGIQEAPFANICLSNISLSINPG 407
G+ G+ + N+ LSN+ +S G
Sbjct: 331 GSLVGLTNSLLQNLTLSNLQISAQTG 356
>gi|430854295|ref|ZP_19472011.1| polygalacturonase [Enterococcus faecium E1258]
gi|430539024|gb|ELA79287.1| polygalacturonase [Enterococcus faecium E1258]
Length = 445
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 174/345 (50%), Gaps = 24/345 (6%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP+G++LTG+ L S++ L L GAV+ S +P + VV + R + +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQS--LNYSRPHLVEFISSENVVVS 191
Y S I + ++ VTG GT+DG G WW F ++S L Y RP L+ F + + V
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNESDNLAYPRPKLMSFHNCHRITVK 143
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ + +P++ I+P+ CSN N+++ P +SP T GI P+S NV I +C I +G D
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 252 ISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++K+G ++ Y R ++ I + G V GSEMSG I N+ + ++
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DDDFDP--D 360
GI ++ +GRGG + I +S+ + N+ F CG G P + P +
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDE 319
Query: 361 ALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
PA +I F +I N+ + F G+ E I NI +S+
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSM 364
>gi|257889036|ref|ZP_05668689.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
gi|257825099|gb|EEV52022.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
Length = 445
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 176/345 (51%), Gaps = 24/345 (6%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP+G++LTG+ L S++ L L GAV+ S +P + +V + R + +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ--SLNYSRPHLVEFISSENVVVS 191
Y S I + ++ VTG GT+DG G WW+ F ++ +L Y RP L+ F + + V
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWNTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ + +P++ I+P+ CSN N+++ P +SP T GI P+S NV I +C I +G D
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 252 ISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++K+G ++ Y R ++ I + G V GSEMSG I N+ + ++
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DDDFDP--D 360
GI ++ +GRGG + I +S+ + N+ +F CG G P + P +
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCSFILNLYYFCGPRGKEPYVWEKTAYPIDE 319
Query: 361 ALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
PA +I F +I N+ + F G+ E I NI +S+
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSM 364
>gi|225874241|ref|YP_002755700.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
gi|225791499|gb|ACO31589.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
Length = 428
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 187/382 (48%), Gaps = 34/382 (8%)
Query: 38 PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLT 97
PHS +GA GDG + +T A Q+AI + A +GG + + G +L+ L S++T
Sbjct: 35 PHS-----YGAKGDGVSKDTAAIQHAI---DACAKRGGGTVLLTPGTYLSAPIVLKSNIT 86
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
L LEKGA +LGS + + + + + GR +SLI+ ++ + G GTI+
Sbjct: 87 LKLEKGATLLGSPDFNDYPAITEFRAPGR---------QSLISAQNASNITIEGA-GTIN 136
Query: 158 GQGSVWWDWFSSQS------LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNV 211
G G+ WW Y+RP L+ F ++VV+ +T N+P + I P Y +V
Sbjct: 137 GNGASWWKMAREHKDTGVMGSQYTRPRLIVFNHCKHVVLEGVTVENSPMWQIVPYYSDDV 196
Query: 212 HIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTD 271
I+NI V AP +P T I P SS +V IE + +G D I++KSG + P+T
Sbjct: 197 IIRNIHVLAPQHAPNTDAIDPFSSSHVLIEHVVANVGDDDIAIKSG-EANSPGPDAPSTY 255
Query: 272 VHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVI 331
+ IR + G SV GSE++GG ++ E I + + NGI + + RG + +V
Sbjct: 256 ITIRDCIFLHGHGLSV--GSEIAGGAQHILAENITMTGTDNGIRVKANRDRGNDVSDLVF 313
Query: 332 SDAELYNINVAFGACGNCGSH-----PDDDFDPDAL-PAIDQITFKDIIGTNITIAGNFT 385
+ ++ N+ A H PD+ L P IT +++ TN AG
Sbjct: 314 KNIQMTNVKNAL-IISEFYPHIYPPMPDNPAPITRLTPHFHNITVENVTATNSKNAGAIA 372
Query: 386 GIQEAPFANICLSNISLSINPG 407
G+ EAP ++ L N+S+ G
Sbjct: 373 GLPEAPIRDVVLKNVSIDAQKG 394
>gi|423299813|ref|ZP_17277838.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
gi|408473622|gb|EKJ92144.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
Length = 450
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 193/443 (43%), Gaps = 67/443 (15%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
M + LL+ L C+ ++ R V + + GA +GK LNT
Sbjct: 1 MNLRTTLLVFLCFCATTVL-----------------RAERVDMLKAGAKANGKALNTKLI 43
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ I L GG L+ P+G +LTGS +L S++TL LE GA +L S N D +
Sbjct: 44 NSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFD--DYLPF 98
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW---------------- 164
+ G+ + + ++ LI ++ + G+ GT+DGQG WW
Sbjct: 99 VEVRHEGVMM--KSFQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMR 155
Query: 165 ------------------------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
D+ S+ + RP ++ I + + + + +N+P
Sbjct: 156 DINKYQPMWDAANDTTAIYAETNKDYVSTLQRRFFRPPFIQPIRCKEIKIEGVKIVNSPF 215
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+ ++P +C NV I+ I++ P SP T GI P+S NV I DC I++G D I++KSG D
Sbjct: 216 WTVNPEFCDNVTIKGITIDNVP-SPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDA 274
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G P ++ I + S G V GSEMSG + V + + GI ++T+
Sbjct: 275 QARRLGVPCENITITNCTMLSGHG-GVVIGSEMSGSVRKVTISNCIFDGTDRGIRIKSTR 333
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI 380
GRGG + I +S+ + NI S + + P + + T++
Sbjct: 334 GRGGVVEDIRVSNIVMSNIKREAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTDVKT 393
Query: 381 AGNFTGIQEAPFANICLSNISLS 403
G++EAP ++I L +I +
Sbjct: 394 PIKIVGLEEAPISDIVLRDIHIQ 416
>gi|336431286|ref|ZP_08611139.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019012|gb|EGN48745.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 519
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 191/393 (48%), Gaps = 32/393 (8%)
Query: 35 DPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTS 94
D + +++++ +FGA GDG +T Q AI +++ +P G + S L
Sbjct: 75 DTQDYTLNVRDFGAKGDGVQDDTTYIQAAIMSCPR-----NSRVLIPEGTYRVTSLFLKD 129
Query: 95 HLTLFLEKGAVILGSQNPSHWDVV-------DPLPSYGRGI--ELPGRRYKSLINGYMLR 145
HLT+ L KGAV+ + ++ D Y G + ++NG ++
Sbjct: 130 HLTMELAKGAVLSAYTERERFSILRGTYQSEDQENEYILGTWEGEAQNMFAGIMNGIGIK 189
Query: 146 DVVVTGDNGTIDGQGSVWWDWF--SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNI 203
DV + G+ GTIDG S W +W+ + + +RP ++ E+V ++ +T N+P++NI
Sbjct: 190 DVTICGE-GTIDGNAS-WENWWLDAKEVRGAARPRMIFLNRCEDVTITGITVQNSPSWNI 247
Query: 204 HPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGI 263
HP +CS++ ++V P SP T G+ P+S D+V I C+ ++G D I++K+G G
Sbjct: 248 HPYFCSHLKFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIAVKAGKISVGA 307
Query: 264 AYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG 323
Y P++++ IR+ ++ G S+ GSEM+ GI N+Q + ++ G+ +T +GRG
Sbjct: 308 KYKVPSSNIRIRQCCMRDGHG-SITLGSEMAAGIKNLQARQCVFLNTDRGLRIKTRRGRG 366
Query: 324 --GYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD----------PDALPAIDQITFK 371
I I+ D + ++ F PD + + P I ++ F+
Sbjct: 367 KDAVIDGILFEDIRMDSVLTPFVINSFYFCDPDGHSEYVQCKEPLAVDERTPQIKELCFR 426
Query: 372 DIIGTNITIAGN-FTGIQEAPFANICLSNISLS 403
+I N +A F G+ E + + +I +S
Sbjct: 427 NIQAKNCHVAAAFFYGLPEQKIERVEMKHIQVS 459
>gi|237710945|ref|ZP_04541426.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229454789|gb|EEO60510.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 446
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 180/405 (44%), Gaps = 50/405 (12%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V + + GA G+ LNT + I L + GG L+ P+G +LTGS ++ S++TL
Sbjct: 25 ERVDMQQAGADIQGRKLNTALINSTIDRLNA---NGGGTLFFPAGTYLTGSIHMKSNITL 81
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LE GA + S+N D + + GI + + ++ LI ++ + G+ GT+DG
Sbjct: 82 ELEAGATLKFSENFD--DFLPYVEVRHEGIMM--KSFQPLIYAVDAENITIKGE-GTLDG 136
Query: 159 QGSVWW----------------------------------------DWFSSQSLNYSRPH 178
QG WW DW + + RP
Sbjct: 137 QGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPP 196
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
+ I +NV V +T +N+P + ++P +C NV I+ I++H P SP T GI P+S NV
Sbjct: 197 FIHPIRCKNVRVEGVTIINSPFWTVNPEFCDNVTIKGITIHNVP-SPNTDGINPESCKNV 255
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
I DC I++G D I++KSG D G P ++ I + S G V GSEMSGG+
Sbjct: 256 HISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHG-GVVIGSEMSGGVK 314
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD 358
V + + GI ++T+GRGG + I +S+ + NI S +
Sbjct: 315 KVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMPAEPK 374
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
D P I + ++ G+ EAP I + ++ +
Sbjct: 375 SDRTPEFRNIYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|86143268|ref|ZP_01061670.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830173|gb|EAQ48633.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 547
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 197/422 (46%), Gaps = 78/422 (18%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT+FGA GDG+ NT AF A + K+F+ +GG + VP G W TG L S++ L L++
Sbjct: 50 ITDFGAKGDGQFKNTEAFHKA--FAKAFS-QGGGTVVVPEGIWYTGPITLKSNINLHLKQ 106
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GA+IL S D D P E L R S IN +++ +TG G IDG G
Sbjct: 107 GALILFS------DQFDDYPLVETSYEGLKSARSTSPINALGAKNIAITG-KGIIDGNGG 159
Query: 162 VW------------WD---------------WFSSQSL--------------------NY 174
W W+ W+ ++ ++
Sbjct: 160 AWRPVKKSKMTQHQWNALVASGGVLSDNKSVWYPDEAALKGSKSDLSDWTIEQLQTVRSF 219
Query: 175 SRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDS 234
RP +V + EN+++ TF N+PA+NIHP+ N+ ++N++V P + G+ +S
Sbjct: 220 LRPVMVSLVDCENILLDGPTFQNSPAWNIHPLMSKNIIVRNLTVRNPWYAQNGDGLDLES 279
Query: 235 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 294
+NV + + +G DAI +KSG +E G PT +V I+ + G V GSEMS
Sbjct: 280 CENVLVYNNTFDVGDDAICIKSGKNEDGRKRNMPTQNVIIKNNTVYHGHGGFVV-GSEMS 338
Query: 295 GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-------NVAFGA-- 345
GG+S + + + + G+ F++T+GRGG + QI IS + I N+ +G
Sbjct: 339 GGVSKIHISHCNFIGTDTGLRFKSTRGRGGVVEQIYISHIYMNEIKTDAIRFNLYYGGQA 398
Query: 346 ---CGNCGSHPDDDFDPDALPAIDQITFKDIIGTNIT-----IAGNFTGIQEAPFANICL 397
+ + +D P+ I+ +FKDI ++IT +G F G+ E N+ +
Sbjct: 399 PDLSNDLAENTEDRDVPEV--TIETPSFKDIYISDITSVKAHKSGFFMGLPEMNIQNVSI 456
Query: 398 SN 399
N
Sbjct: 457 KN 458
>gi|182415146|ref|YP_001820212.1| galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
gi|177842360|gb|ACB76612.1| Galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
Length = 478
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 179/374 (47%), Gaps = 26/374 (6%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ +T+FGAVGDG TLNT + + + A GG +L VP+G + TG F L S L L
Sbjct: 87 RTFRLTDFGAVGDGTTLNT---EAFARAIAAVAKAGGGKLVVPAGTFRTGPFALCSSLEL 143
Query: 99 FLEKGAVILGSQNPSHWDVVDPLP-SYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
LE GA+I + W + +P S + + LI+G L DV +TG +G ID
Sbjct: 144 HLEAGALIQAPATFADWGLPEPTTFSSQAEVNAAVKPVPPLIHGRKLHDVAITG-SGQID 202
Query: 158 GQGSVWWDWFSSQS------LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNV 211
G G++WW W + L Y R H++ E + V+++T N+ +++ P +++
Sbjct: 203 GNGALWWAWSERAARAQRGRLVYKRTHMIIIDGCERLRVADVTLSNSAMFHLVPRRITDL 262
Query: 212 HIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTD 271
I+ + V AP E+P T I P S N I C I G D I +KSG T+
Sbjct: 263 TIERVKVRAPEEAPNTDAIDPGSVTNAWIHHCDIDTGDDNIVIKSG-----------GTN 311
Query: 272 VHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVI 331
+ I +++ G ++ GSE + G+ N+ V + + NGI ++ +G GG + I
Sbjct: 312 ILIEDCVIK--HGHGISIGSETTEGVRNMLVRRCSFDGTDNGIRIKSMRGAGGVVENIRY 369
Query: 332 SDAELYNIN--VAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQE 389
+ + ++ + + P+ DP +P I I + T AG G+ +
Sbjct: 370 TGITMKDVENAIVLDLTYTDNNRPNFRGDPTKIPVIRDILIDHVTVTGSLKAGKIVGLPD 429
Query: 390 APFANICLSNISLS 403
+P + + L ++++
Sbjct: 430 SPISGVTLRDVTIQ 443
>gi|424907689|ref|ZP_18331159.1| polygalacturonase [Enterococcus faecium R497]
gi|425060672|ref|ZP_18463956.1| polygalacturonase [Enterococcus faecium 503]
gi|402930043|gb|EJX49746.1| polygalacturonase [Enterococcus faecium R497]
gi|403042383|gb|EJY53341.1| polygalacturonase [Enterococcus faecium 503]
Length = 445
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 174/345 (50%), Gaps = 24/345 (6%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP+G++LTG+ L S++ L L GAV+ S +P + VV + R + +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ--SLNYSRPHLVEFISSENVVVS 191
Y S I + ++ VTG GT+DG G WW F ++ +L Y RP L+ F + + V
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ + +P++ I+P+ CSN N+++ P +SP T GI P+S NV I +C I +G D
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 252 ISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++K+G ++ Y R ++ I + G V GSEMSG I N+ + ++
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DDDFDP--D 360
GI ++ +GRGG + I +S+ + N+ F CG G P + P +
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDE 319
Query: 361 ALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
PA +I F +I N+ + F G+ E I NI +S+
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSM 364
>gi|431753622|ref|ZP_19542291.1| polygalacturonase [Enterococcus faecium E2620]
gi|430611655|gb|ELB48732.1| polygalacturonase [Enterococcus faecium E2620]
Length = 445
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 175/345 (50%), Gaps = 24/345 (6%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP+G++LTG+ L S++ L L GAV+ S +P + +V + R + +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ--SLNYSRPHLVEFISSENVVVS 191
Y S I + ++ VTG GT+DG G WW+ F ++ +L Y RP L+ F + + V
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWNTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ + +P++ I+P+ CSN N+++ P +SP T GI P+S NV I +C I +G D
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 252 ISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++K+G ++ Y R ++ I + G V GSEMSG I N+ + ++
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DDDFDP--D 360
GI ++ +GRGG + I +S+ + N+ F CG G P + P +
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKTAYPIDE 319
Query: 361 ALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
PA +I F +I N+ + F G+ E I NI +S+
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSM 364
>gi|69244135|ref|ZP_00602671.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257880495|ref|ZP_05660148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257886384|ref|ZP_05666037.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257891474|ref|ZP_05671127.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257894583|ref|ZP_05674236.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260562495|ref|ZP_05833005.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|293559894|ref|ZP_06676406.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|293568212|ref|ZP_06679546.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|314938527|ref|ZP_07845812.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942455|ref|ZP_07849295.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314949488|ref|ZP_07852823.1| polygalacturonase [Enterococcus faecium TX0082]
gi|314952932|ref|ZP_07855899.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992201|ref|ZP_07857644.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995242|ref|ZP_07860354.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329854|ref|YP_005355738.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|389869663|ref|YP_006377086.1| pectin lyase [Enterococcus faecium DO]
gi|406581497|ref|ZP_11056639.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583788|ref|ZP_11058833.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586132|ref|ZP_11061069.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591696|ref|ZP_11065942.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936309|ref|ZP_11368176.1| pectin lyase [Enterococcus sp. GMD5E]
gi|415891706|ref|ZP_11549795.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|416141642|ref|ZP_11599435.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|424845976|ref|ZP_18270576.1| polygalacturonase [Enterococcus faecium R501]
gi|424854976|ref|ZP_18279307.1| polygalacturonase [Enterococcus faecium R499]
gi|424960548|ref|ZP_18375053.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964739|ref|ZP_18378806.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971119|ref|ZP_18384580.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974622|ref|ZP_18387847.1| polygalacturonase [Enterococcus faecium P1137]
gi|424978117|ref|ZP_18391065.1| polygalacturonase [Enterococcus faecium P1123]
gi|424981120|ref|ZP_18393872.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983707|ref|ZP_18396282.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987493|ref|ZP_18399867.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424990935|ref|ZP_18403122.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007173|ref|ZP_18418318.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014684|ref|ZP_18425349.1| polygalacturonase [Enterococcus faecium E417]
gi|425021605|ref|ZP_18431844.1| polygalacturonase [Enterococcus faecium C497]
gi|425023089|ref|ZP_18433228.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034680|ref|ZP_18439557.1| polygalacturonase [Enterococcus faecium 514]
gi|425042053|ref|ZP_18446419.1| polygalacturonase [Enterococcus faecium 511]
gi|425046647|ref|ZP_18450644.1| polygalacturonase [Enterococcus faecium 510]
gi|425047911|ref|ZP_18451842.1| polygalacturonase [Enterococcus faecium 509]
gi|425051834|ref|ZP_18455475.1| polygalacturonase [Enterococcus faecium 506]
gi|427397520|ref|ZP_18890002.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430824500|ref|ZP_19443057.1| polygalacturonase [Enterococcus faecium E0120]
gi|430832640|ref|ZP_19450680.1| polygalacturonase [Enterococcus faecium E0333]
gi|430845579|ref|ZP_19463463.1| polygalacturonase [Enterococcus faecium E1050]
gi|430848400|ref|ZP_19466219.1| polygalacturonase [Enterococcus faecium E1133]
gi|430856194|ref|ZP_19473897.1| polygalacturonase [Enterococcus faecium E1392]
gi|430868562|ref|ZP_19482856.1| polygalacturonase [Enterococcus faecium E1574]
gi|430968703|ref|ZP_19487864.1| polygalacturonase [Enterococcus faecium E1576]
gi|431017544|ref|ZP_19490421.1| polygalacturonase [Enterococcus faecium E1578]
gi|431243672|ref|ZP_19503845.1| polygalacturonase [Enterococcus faecium E1622]
gi|431261230|ref|ZP_19505727.1| polygalacturonase [Enterococcus faecium E1623]
gi|431323325|ref|ZP_19509129.1| polygalacturonase [Enterococcus faecium E1626]
gi|431388088|ref|ZP_19511694.1| polygalacturonase [Enterococcus faecium E1627]
gi|431520927|ref|ZP_19516641.1| polygalacturonase [Enterococcus faecium E1634]
gi|431565473|ref|ZP_19519835.1| polygalacturonase [Enterococcus faecium E1731]
gi|431744393|ref|ZP_19533261.1| polygalacturonase [Enterococcus faecium E2071]
gi|431747806|ref|ZP_19536575.1| polygalacturonase [Enterococcus faecium E2134]
gi|431750363|ref|ZP_19539082.1| polygalacturonase [Enterococcus faecium E2297]
gi|431755429|ref|ZP_19544078.1| polygalacturonase [Enterococcus faecium E2883]
gi|431769096|ref|ZP_19557524.1| polygalacturonase [Enterococcus faecium E1321]
gi|431771659|ref|ZP_19560039.1| polygalacturonase [Enterococcus faecium E1644]
gi|431774529|ref|ZP_19562836.1| polygalacturonase [Enterococcus faecium E2369]
gi|431780636|ref|ZP_19568809.1| polygalacturonase [Enterococcus faecium E4389]
gi|447913741|ref|YP_007395153.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|68196592|gb|EAN11018.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257814723|gb|EEV43481.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257822240|gb|EEV49370.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257827834|gb|EEV54460.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257830962|gb|EEV57569.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260073180|gb|EEW61525.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|291589112|gb|EFF20926.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|291606166|gb|EFF35588.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|313590498|gb|EFR69343.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593259|gb|EFR72104.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595004|gb|EFR73849.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598763|gb|EFR77608.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642155|gb|EFS06735.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|313644102|gb|EFS08682.1| polygalacturonase [Enterococcus faecium TX0082]
gi|364090036|gb|EHM32668.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|364093766|gb|EHM36003.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|378939548|gb|AFC64620.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|388534912|gb|AFK60104.1| pectin lyase [Enterococcus faecium DO]
gi|402919804|gb|EJX40370.1| polygalacturonase [Enterococcus faecium R501]
gi|402931909|gb|EJX51460.1| polygalacturonase [Enterococcus faecium R499]
gi|402945957|gb|EJX64277.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947330|gb|EJX65549.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955965|gb|EJX73454.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959987|gb|EJX77180.1| polygalacturonase [Enterococcus faecium P1139]
gi|402963038|gb|EJX79936.1| polygalacturonase [Enterococcus faecium P1123]
gi|402964595|gb|EJX81367.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970840|gb|EJX87153.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402974315|gb|EJX90374.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402978299|gb|EJX94052.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402995607|gb|EJY10050.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402997994|gb|EJY12279.1| polygalacturonase [Enterococcus faecium E417]
gi|403006146|gb|EJY19813.1| polygalacturonase [Enterococcus faecium C497]
gi|403010843|gb|EJY24188.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019826|gb|EJY32405.1| polygalacturonase [Enterococcus faecium 514]
gi|403023540|gb|EJY35785.1| polygalacturonase [Enterococcus faecium 510]
gi|403024463|gb|EJY36619.1| polygalacturonase [Enterococcus faecium 511]
gi|403032239|gb|EJY43807.1| polygalacturonase [Enterococcus faecium 509]
gi|403036560|gb|EJY47906.1| polygalacturonase [Enterococcus faecium 506]
gi|404452556|gb|EJZ99740.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456111|gb|EKA02868.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461640|gb|EKA07534.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467219|gb|EKA12401.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735255|gb|EKQ77169.1| pectin lyase [Enterococcus sp. GMD5E]
gi|425722196|gb|EKU85093.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430441028|gb|ELA51171.1| polygalacturonase [Enterococcus faecium E0120]
gi|430479695|gb|ELA56911.1| polygalacturonase [Enterococcus faecium E0333]
gi|430495386|gb|ELA71561.1| polygalacturonase [Enterococcus faecium E1050]
gi|430534971|gb|ELA75396.1| polygalacturonase [Enterococcus faecium E1133]
gi|430545280|gb|ELA85263.1| polygalacturonase [Enterococcus faecium E1392]
gi|430548826|gb|ELA88674.1| polygalacturonase [Enterococcus faecium E1574]
gi|430554873|gb|ELA94441.1| polygalacturonase [Enterococcus faecium E1576]
gi|430559243|gb|ELA98603.1| polygalacturonase [Enterococcus faecium E1578]
gi|430571641|gb|ELB10527.1| polygalacturonase [Enterococcus faecium E1622]
gi|430576635|gb|ELB15272.1| polygalacturonase [Enterococcus faecium E1623]
gi|430577973|gb|ELB16549.1| polygalacturonase [Enterococcus faecium E1626]
gi|430580353|gb|ELB18826.1| polygalacturonase [Enterococcus faecium E1627]
gi|430585070|gb|ELB23371.1| polygalacturonase [Enterococcus faecium E1634]
gi|430589382|gb|ELB27511.1| polygalacturonase [Enterococcus faecium E1731]
gi|430604693|gb|ELB42128.1| polygalacturonase [Enterococcus faecium E2134]
gi|430605136|gb|ELB42541.1| polygalacturonase [Enterococcus faecium E2071]
gi|430609790|gb|ELB46967.1| polygalacturonase [Enterococcus faecium E2297]
gi|430616651|gb|ELB53546.1| polygalacturonase [Enterococcus faecium E2883]
gi|430628012|gb|ELB64470.1| polygalacturonase [Enterococcus faecium E1321]
gi|430632933|gb|ELB69123.1| polygalacturonase [Enterococcus faecium E1644]
gi|430633934|gb|ELB70079.1| polygalacturonase [Enterococcus faecium E2369]
gi|430639091|gb|ELB74973.1| polygalacturonase [Enterococcus faecium E4389]
gi|445189450|gb|AGE31092.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 445
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 174/345 (50%), Gaps = 24/345 (6%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP+G++LTG+ L S++ L L GAV+ S +P + VV + R + +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ--SLNYSRPHLVEFISSENVVVS 191
Y S I + ++ VTG GT+DG G WW F ++ +L Y RP L+ F + + V
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ + +P++ I+P+ CSN N+++ P +SP T GI P+S NV I +C I +G D
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 252 ISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++K+G ++ Y R ++ I + G V GSEMSG I N+ + ++
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DDDFDP--D 360
GI ++ +GRGG + I +S+ + N+ F CG G P + P +
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDE 319
Query: 361 ALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
PA +I F +I N+ + F G+ E I NI +S+
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSM 364
>gi|431472772|ref|ZP_19514500.1| polygalacturonase [Enterococcus faecium E1630]
gi|431761402|ref|ZP_19549976.1| polygalacturonase [Enterococcus faecium E3346]
gi|430583557|gb|ELB21919.1| polygalacturonase [Enterococcus faecium E1630]
gi|430621543|gb|ELB58304.1| polygalacturonase [Enterococcus faecium E3346]
Length = 445
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 174/345 (50%), Gaps = 24/345 (6%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP+G++LTG+ L S++ L L GAV+ S +P + VV + R + +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ--SLNYSRPHLVEFISSENVVVS 191
Y S I + ++ VTG GT+DG G WW F ++ +L Y RP L+ F + + V
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ + +P++ I+P+ CSN N+++ P +SP T GI P+S NV I +C I +G D
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 252 ISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++K+G ++ Y R ++ I + G V GSEMSG I N+ + ++
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DDDFDP--D 360
GI ++ +GRGG + I +S+ + N+ F CG G P + P +
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDE 319
Query: 361 ALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
PA +I F +I N+ + F G+ E I NI +S+
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSM 364
>gi|430834097|ref|ZP_19452106.1| polygalacturonase [Enterococcus faecium E0679]
gi|430485620|gb|ELA62520.1| polygalacturonase [Enterococcus faecium E0679]
Length = 452
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 174/345 (50%), Gaps = 24/345 (6%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP+G++LTG+ L S++ L L GAV+ S +P + VV + R + +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ--SLNYSRPHLVEFISSENVVVS 191
Y S I + ++ VTG GT+DG G WW F ++ +L Y RP L+ F + + V
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ + +P++ I+P+ CSN N+++ P +SP T GI P+S NV I +C I +G D
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 252 ISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++K+G ++ Y R ++ I + G V GSEMSG I N+ + ++
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DDDFDP--D 360
GI ++ +GRGG + I +S+ + N+ F CG G P + P +
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDE 319
Query: 361 ALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
PA +I F +I N+ + F G+ E I NI +S+
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSM 364
>gi|380693857|ref|ZP_09858716.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 525
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 204/423 (48%), Gaps = 68/423 (16%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA+ DG TLNT A NAI K+ + KGG ++ +P G WLTG L S++ L
Sbjct: 57 YEVNIRDFGALSDGVTLNTEAINNAI---KTVSSKGGGKVIIPEGLWLTGPVVLLSNVNL 113
Query: 99 FLEKGAVILGSQNPSHWDVVD-------------PLPSY--------GRGI-ELPGRRYK 136
+ EK A+I+ S + S + +++ P+ + G G+ + G R++
Sbjct: 114 YTEKNALIVFSSDTSLYPIIEASFEGLDTKRCQSPISAMNAENIAITGSGVFDGAGDRWR 173
Query: 137 SLINGYML----RDVVVTGDNGTIDGQGSVWW-------------------------DWF 167
+ M +++V +G G +D G VW+ +W
Sbjct: 174 PVKKDKMTERQWKNLVSSG--GKVDENGKVWYPDAGALKASVLMTGQNSGQKEITDEEWI 231
Query: 168 SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
+S + RP ++ + S+ +++ +TF N+P + IHP+ C ++ + ++ V P S
Sbjct: 232 YMKS--WLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNG 289
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV 287
+ +S NV + +C G DAI LKSG DE G G P +V I+ + G V
Sbjct: 290 DALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLHGHGGFV 349
Query: 288 AFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACG 347
GSEMSGG+ NV V + G+ F++T+GRGG + I I + + I++ A
Sbjct: 350 -IGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINM--IDIPNDALT 406
Query: 348 NCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSNI 400
+ +D +P +++ T F++I +N+ G F G+ E P NI + N+
Sbjct: 407 MDLYYAVNDSPETPIPDVNEETPVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNILIKNM 466
Query: 401 SLS 403
+++
Sbjct: 467 TVT 469
>gi|298385027|ref|ZP_06994586.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298262171|gb|EFI05036.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 528
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 204/423 (48%), Gaps = 68/423 (16%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA+ DG TLNT A NAI K+ + KGG ++ +P G WLTG L S++ L
Sbjct: 57 YEVNIRDFGALSDGVTLNTEAINNAI---KAVSSKGGGKVIIPEGLWLTGPVVLLSNVNL 113
Query: 99 FLEKGAVILGSQNPSHWDVVD-------------PLPSY--------GRGI-ELPGRRYK 136
+ EK A+I+ S + S + ++D P+ + G G+ + G R++
Sbjct: 114 YAEKNALIVFSSDTSLYPIIDTSFEGLDTKRCQSPISAMNAENIAITGNGVFDGAGDRWR 173
Query: 137 SLINGYML----RDVVVTGDNGTIDGQGSVWW-------------------------DWF 167
+ M +++V +G G +D G VW+ +W
Sbjct: 174 PVKKDKMTERQWKNLVSSG--GKVDENGKVWYPDAGALKASVLMTGQNNGQKEITDEEWT 231
Query: 168 SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
+S + RP ++ + S+ +++ +TF N+P + IHP+ C ++ + ++ V P S
Sbjct: 232 YMKS--WLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNG 289
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV 287
+ +S NV + +C G DAI LKSG DE G G +V I+ + G V
Sbjct: 290 DALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGESCENVIIKNNTVLHGHGGFV 349
Query: 288 AFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACG 347
GSEMSGG+ NV V + G+ F++T+GRGG + I I + + I++ A
Sbjct: 350 -IGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINM--IDIPNDALT 406
Query: 348 NCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSNI 400
+ +DF +P +++ T F++I +N+ G F G+ E P NI + N+
Sbjct: 407 MDLYYAVNDFPETPIPDVNEETPVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNIFIKNM 466
Query: 401 SLS 403
+++
Sbjct: 467 TVT 469
>gi|430821816|ref|ZP_19440403.1| polygalacturonase [Enterococcus faecium E0045]
gi|430830077|ref|ZP_19448143.1| polygalacturonase [Enterococcus faecium E0269]
gi|430921162|ref|ZP_19485329.1| polygalacturonase [Enterococcus faecium E1575]
gi|431703882|ref|ZP_19525108.1| polygalacturonase [Enterococcus faecium E1904]
gi|431766532|ref|ZP_19555009.1| polygalacturonase [Enterococcus faecium E4215]
gi|430438088|gb|ELA48576.1| polygalacturonase [Enterococcus faecium E0045]
gi|430479132|gb|ELA56406.1| polygalacturonase [Enterococcus faecium E0269]
gi|430554055|gb|ELA93727.1| polygalacturonase [Enterococcus faecium E1575]
gi|430596728|gb|ELB34544.1| polygalacturonase [Enterococcus faecium E1904]
gi|430626092|gb|ELB62680.1| polygalacturonase [Enterococcus faecium E4215]
Length = 445
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 174/345 (50%), Gaps = 24/345 (6%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP+G++LTG+ L S++ L L GAV+ S +P + VV + R + +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ--SLNYSRPHLVEFISSENVVVS 191
Y S I + ++ VTG GT+DG G WW F ++ +L Y RP L+ F + + V
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ + +P++ I+P+ CSN N+++ P +SP T GI P+S NV I +C I +G D
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 252 ISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++K+G ++ Y R ++ I + G V GSEMSG I N+ + ++
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DDDFDP--D 360
GI ++ +GRGG + I +S+ + N+ F CG G P + P +
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKTAYPIDE 319
Query: 361 ALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
PA +I F +I N+ + F G+ E I NI +S+
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSM 364
>gi|160945608|ref|ZP_02092834.1| hypothetical protein FAEPRAM212_03137 [Faecalibacterium prausnitzii
M21/2]
gi|158443339|gb|EDP20344.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 518
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 196/396 (49%), Gaps = 40/396 (10%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V +G V DG+T NT+ Q A+ S KGG +YVP+G++ T S + S+ TL+L
Sbjct: 82 VDAARYGLVADGETDNTVRLQAAL----STCPKGGT-VYVPAGRYRTASLFMKSNTTLYL 136
Query: 101 EKGAVILGSQNPSHWDVV-DPLPSYGRGIEL--------PGRRYKSLINGYMLRDVVVTG 151
EKGAV+LG + +H+ ++ LPS E P + L+N + DVVVTG
Sbjct: 137 EKGAVLLGDNDRTHYPILPGVLPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTG 196
Query: 152 DNGTID--GQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
+ GT+D + WW + + + RP V + SENV + +T N+ ++ IHP++
Sbjct: 197 E-GTLDCDAENGDWWVNPKVKRIAW-RPRAVAAVDSENVCLHGITVQNSYSWTIHPIFVK 254
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
++ + N +++ P +P T GI P+S + + I I +G D I++K+ G+ R
Sbjct: 255 HLDLLNFNINNPYNAPNTDGIDPESCEYIRIIGMNIHVGDDCIAMKASKVFLGMKLKRSC 314
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIR 327
IR LL G + GSEMSGG+ ++ V + + + G+ +T +GRG I
Sbjct: 315 EHTVIRNCLLDKGHG-GIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVID 373
Query: 328 QIVISDAELYNINVAF-------------GACGNCGSH-PDDDFDPDALPAIDQITFKDI 373
+V + E+ + F G C P D++ P + +T ++I
Sbjct: 374 GLVFRNVEMRGVKAPFVINMFYFCDPDGHGPYVQCREPLPVDEY----TPKLGSLTMENI 429
Query: 374 IGTNITIAG-NFTGIQEAPFANICLSNISLSINPGS 408
+ T+ AG F G+ E P + + ++S++ +P +
Sbjct: 430 VATDAQFAGCYFDGLPEQPIERVTMRDVSITFDPNA 465
>gi|224536305|ref|ZP_03676844.1| hypothetical protein BACCELL_01177, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522067|gb|EEF91172.1| hypothetical protein BACCELL_01177 [Bacteroides cellulosilyticus
DSM 14838]
Length = 434
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 165/353 (46%), Gaps = 63/353 (17%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V++ +FGAVG+G+ L T AF AI + A+KGG L VP+G W TG L S++ L
Sbjct: 48 RKVNLADFGAVGNGEELCTAAFAKAI---DTLAEKGGGHLIVPAGVWFTGPIVLKSNIDL 104
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTID 157
LEKGAVIL S + VD P E L RR +S ++G L +V +TG+ G ID
Sbjct: 105 HLEKGAVILFSPD------VDLYPLVETVFEGLDTRRCQSPVSGRNLENVAITGE-GAID 157
Query: 158 GQGSVW------------WD--------------WFS-SQSL------------------ 172
G G W W WF Q+L
Sbjct: 158 GNGHYWRPLKREKVTEGVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEE 217
Query: 173 ------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPY 226
++ RP +V I +NV + + F N+PA+N+HP+ C NV I+ + V P +
Sbjct: 218 EWQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQN 277
Query: 227 TVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSS 286
G+ +S N I + +G D I LKSG DE G GR +V + + G
Sbjct: 278 GDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCTVFKGHGGF 337
Query: 287 VAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI 339
V GSEMSGG+ NV V + G+ F++ +GRGG + I I + + +I
Sbjct: 338 VV-GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAMMDI 389
>gi|257440293|ref|ZP_05616048.1| polygalacturonase [Faecalibacterium prausnitzii A2-165]
gi|257197327|gb|EEU95611.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii A2-165]
Length = 518
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 193/392 (49%), Gaps = 32/392 (8%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V + +G V DG T NT Q A+ S KGG +YVP+G++ T S + S TL+L
Sbjct: 82 VDASRYGLVADGTTDNTGKLQAAL----STCPKGGT-VYVPAGRYRTSSLFMKSCTTLYL 136
Query: 101 EKGAVILGSQNPSHWDVV-DPLPSYGRGIEL--------PGRRYKSLINGYMLRDVVVTG 151
EKGAV+LG + +H+ ++ +PS E P + L+N + DVVVTG
Sbjct: 137 EKGAVLLGDNDRTHYPILPGVIPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTG 196
Query: 152 DNGTID--GQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
+ GT+D Q WW + + + RP V + SENV + +T N+ ++ IHP++
Sbjct: 197 E-GTLDCDAQNGDWWINQKVKRIAW-RPRAVAAVDSENVCLHGITVQNSYSWTIHPIFVK 254
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
++ + N +++ P +P T GI P+S + + I I +G D I++K+ G+ +
Sbjct: 255 HLDLLNFNINNPYNAPNTDGIDPESCEYIRIIGANIHVGDDCIAMKASKVFLGMKLKKSC 314
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIR 327
IR LL G + GSEMSGG+ ++ V + + + G+ +T +GRG I
Sbjct: 315 EHTVIRNCLLDKGHG-GIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVID 373
Query: 328 QIVISDAELYNINVAFGA-----CGNCGSHP----DDDFDPDAL-PAIDQITFKDIIGTN 377
+V + E+ + F C G P D D P + +T +DI+ T+
Sbjct: 374 GLVFRNVEMRGVKTPFVINMFYFCDPDGHSPYVQCRDAMPVDEYTPKLGSLTMEDIVATD 433
Query: 378 ITIAG-NFTGIQEAPFANICLSNISLSINPGS 408
AG F G+ E P I + N++++ +P +
Sbjct: 434 AQFAGCYFDGLPEQPIERISMKNVTITFDPNA 465
>gi|291538883|emb|CBL11994.1| Endopolygalacturonase [Roseburia intestinalis XB6B4]
Length = 518
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 192/399 (48%), Gaps = 42/399 (10%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++++ +FGA GDGK +T Q AI A +++ +P G + S L S+L L
Sbjct: 82 TLNVRDFGATGDGKQDDTKFIQAAIL-----ACPKESRVLIPKGSYRITSLFLKSNLRLE 136
Query: 100 LEKGAVILGSQN-------PSHWDVVDPLPSYGRGI----ELPGRRYKSLINGYMLRDVV 148
L KGA ++ + P + D Y G LP + +I G + +V+
Sbjct: 137 LAKGAELIADTDRAVYPKFPGMIESYDEQGEYNLGTWEGNPLP--MFAGIITGLDVENVL 194
Query: 149 VTGDNGTIDGQGSV--WWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
+ G GTI+G S WW + RP L +NV + +TF N+P++ +HP
Sbjct: 195 IYG-RGTINGNASKENWWKN-PKVMVGAFRPRLFFLSHCQNVTLCGVTFKNSPSWTLHPY 252
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
+ N+ ++++ P +SP T G+ P+S NV I ++G D I++KSG G Y
Sbjct: 253 FSDNLKFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCIAVKSGKIYMGKKYR 312
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--G 324
P+ ++HIR+ L+++ G +V GSEM+GG+ N+ VE+ YD+ G+ +T +GRG
Sbjct: 313 TPSENIHIRQCLMENGHG-AVTVGSEMAGGVKNLVVEECRFYDTDRGLRIKTRRGRGKDA 371
Query: 325 YIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP------------DALPAIDQITFKD 372
+ QI+ ++ + F NC D D D PAI ++ F+D
Sbjct: 372 VLDQIIFRKIDMDQVMTPF--VINCFYFCDPDGKTEFVQSREKMPVDDGTPAILRLDFED 429
Query: 373 IIGTNITIAGN-FTGIQEAPFANICLSNISLSI--NPGS 408
I N +A F G+ E I + NI+++ NP S
Sbjct: 430 IKAQNCHVAAAYFDGLPEQKIEQIIMKNITVTYAKNPKS 468
>gi|284172853|ref|YP_003406235.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
gi|284017613|gb|ADB63562.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
Length = 541
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 177/394 (44%), Gaps = 38/394 (9%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
P I E+GA GD L+T A Q A L A+ GG +YVPSG ++TG +
Sbjct: 29 PETDGFDIREYGATGDSDALDTEAIQTA---LDECAESGGT-VYVPSGTYVTGPLRVGDQ 84
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
TL L+ GA + Q ++ + S G G L++ +V +TG GT
Sbjct: 85 TTLHLDAGATL---QFVGDYEAFPTVQSRWEGWNQYGFHPCLLVDD--AENVSITG-RGT 138
Query: 156 IDGQGSVWWDWFSS----------------QSLNYS---------RPHLVEFISSENVVV 190
IDG G WW ++ + + N RP L + SENV V
Sbjct: 139 IDGGGEYWWQFYDAPESEIPDGLQERLAEFEEKNEKQDDVSSFTHRPPLFQISESENVSV 198
Query: 191 SNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHD 250
S +T N+P +N H VY NV I ++++ P ++P GI DSS V I D I G D
Sbjct: 199 SGVTLENSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSRYVRISDTYINAGDD 258
Query: 251 AISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
AI +KSG + G G P + + + +++ G V GSEMSG + +V V D+
Sbjct: 259 AICIKSGKNAEGREVGEPASQITVTNCTVEAGHG-GVVIGSEMSGDVRDVTVSNCTFTDT 317
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP--DALPAIDQI 368
G+ +T + RGG + + + + I F G D D +P + P + +
Sbjct: 318 DRGVRIKTARDRGGVVEDLRFDNIVMRRIACPFTINGYYFMPLDSDSEPVDEGTPMVRNV 377
Query: 369 TFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 402
+F +I + AG F G+ E F I +++ +
Sbjct: 378 SFTNITARQVETAGFFAGLPEQYFEGISFNDVQI 411
>gi|379723469|ref|YP_005315600.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
3016]
gi|386726203|ref|YP_006192529.1| glycoside hydrolase [Paenibacillus mucilaginosus K02]
gi|378572141|gb|AFC32451.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus 3016]
gi|384093328|gb|AFH64764.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
K02]
Length = 530
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 198/449 (44%), Gaps = 82/449 (18%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
QP++ R S S+T++GAVGDG T NT AF AI + + GG ++ +P+G WLTG
Sbjct: 20 QPSIPDR--SFSVTDYGAVGDGVTDNTEAFHKAI---AACSQAGGGRVVIPAGVWLTGPL 74
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
+L S L L + GA++L S+ + ++ + + P R +S ++G L V +T
Sbjct: 75 SLASRLDLHAQAGALVLFSRRFEDYPMI-----FSQYEGQPSIRCQSPLDGEGLEHVAIT 129
Query: 151 GDNGTIDGQGSVW-----WD-----------------------WFSSQSLN--------- 173
G G DG G W W W S ++N
Sbjct: 130 G-AGVFDGGGDAWRPVKDWKMTEKHWAKLIASGGVVDEDAGMWWPSEAAMNGPAKVAQLK 188
Query: 174 ---------------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISV 218
Y RP+L+ + V++ TF N+PA+N+HP C +V ++ ++V
Sbjct: 189 REGSTDPKDYEAARDYLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTV 248
Query: 219 HAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVL 278
P G+ DS +EDC +G DAI +KSG DE G A G P D+ IR
Sbjct: 249 RNPWYGQNGDGLDLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRALGIPCEDILIRNCR 308
Query: 279 LQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYN 338
+ G V GSEMSGG+ ++VE + G+ F++T+GRGG + I I E
Sbjct: 309 VYHGHGGFV-IGSEMSGGVRRLRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEI---ERIR 364
Query: 339 INVAFGAC--------GNCGSH-PDDDFDPDAL--PAIDQITFKDIIGTNITIAGNFTGI 387
+N G G GS ++ P ++ P IT +D+ A G+
Sbjct: 365 MNSIVGEAISFHLFYEGKEGSGVAGENIVPVSVETPIFRGITIRDVQCAGAETALLINGL 424
Query: 388 QEAPFANICLSNISLSINPGSYNSWECSN 416
E P + + N + S G C+N
Sbjct: 425 PEMPLDGLVVENFTASAKRGGV----CTN 449
>gi|240144096|ref|ZP_04742697.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|257203884|gb|EEV02169.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|291536249|emb|CBL09361.1| Endopolygalacturonase [Roseburia intestinalis M50/1]
Length = 518
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 192/399 (48%), Gaps = 42/399 (10%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++++ +FGA GDGK +T Q AI A +++ +P G + S L S+L L
Sbjct: 82 TLNVRDFGATGDGKQDDTKFIQAAIL-----ACPKESRVLIPKGSYRITSLFLKSNLRLE 136
Query: 100 LEKGAVILGSQN-------PSHWDVVDPLPSYGRGI----ELPGRRYKSLINGYMLRDVV 148
L KGA ++ + P + D Y G LP + +I G + +V+
Sbjct: 137 LAKGAELIADTDRAAYPKFPGMIESYDEQGEYNLGTWEGNPLP--MFAGIITGLDVENVL 194
Query: 149 VTGDNGTIDGQGSV--WWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
+ G GTI+G S WW + RP L +NV + +TF N+P++ +HP
Sbjct: 195 IYG-RGTINGNASKENWWKN-PKVMVGAFRPRLFFLSHCQNVTLCGVTFKNSPSWTLHPY 252
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
+ N+ ++++ P +SP T G+ P+S NV I ++G D I++KSG G Y
Sbjct: 253 FSDNLKFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCIAVKSGKIYMGKKYR 312
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--G 324
P+ ++HIR+ L+++ G +V GSEM+GG+ N+ VE+ YD+ G+ +T +GRG
Sbjct: 313 TPSENIHIRQCLMENGHG-AVTVGSEMAGGVKNLVVEECRFYDTDRGLRIKTRRGRGKDA 371
Query: 325 YIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP------------DALPAIDQITFKD 372
+ QI+ ++ + F NC D D D PAI ++ F+D
Sbjct: 372 VLDQIIFRKIDMDQVMTPF--VINCFYFCDPDGKTEFVQSREKMPVDDGTPAILRLDFED 429
Query: 373 IIGTNITIAGN-FTGIQEAPFANICLSNISLSI--NPGS 408
I N +A F G+ E I + NI+++ NP S
Sbjct: 430 IKAQNCHVAAAYFDGLPEQKIEQIIMKNITVTYAKNPKS 468
>gi|425055000|ref|ZP_18458495.1| polygalacturonase [Enterococcus faecium 505]
gi|403034850|gb|EJY46272.1| polygalacturonase [Enterococcus faecium 505]
Length = 445
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 174/345 (50%), Gaps = 24/345 (6%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP+G++LTG+ L S++ L L GAV+ S +P + +V + R + +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ--SLNYSRPHLVEFISSENVVVS 191
Y S I + ++ VTG GT+DG G WW F ++ +L Y RP L+ F + + V
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ + +P++ I+P+ CSN N+++ P +SP T GI P+S NV I +C I +G D
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 252 ISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++K+G ++ Y R ++ I + G V GSEMSG I N+ + ++
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DDDFDP--D 360
GI ++ +GRGG + I +S+ + N+ F CG G P + P +
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKTAYPIDE 319
Query: 361 ALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
PA +I F +I N+ + F G+ E I NI +S+
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSM 364
>gi|227550311|ref|ZP_03980360.1| pectin lyase [Enterococcus faecium TX1330]
gi|257897632|ref|ZP_05677285.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|293379031|ref|ZP_06625184.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|424764556|ref|ZP_18191976.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431758788|ref|ZP_19547411.1| polygalacturonase [Enterococcus faecium E3083]
gi|227180571|gb|EEI61543.1| pectin lyase [Enterococcus faecium TX1330]
gi|257834197|gb|EEV60618.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|292642310|gb|EFF60467.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|402419039|gb|EJV51323.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430616603|gb|ELB53499.1| polygalacturonase [Enterococcus faecium E3083]
Length = 445
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 174/345 (50%), Gaps = 24/345 (6%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP+G++LTG+ L S++ L L GAV+ S +P + +V + R + +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ--SLNYSRPHLVEFISSENVVVS 191
Y S I + ++ VTG GT+DG G WW F ++ +L Y RP L+ F + + V
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ + +P++ I+P+ CSN N+++ P +SP T GI P+S NV I +C I +G D
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 252 ISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++K+G ++ Y R ++ I + G V GSEMSG I N+ + ++
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DDDFDP--D 360
GI ++ +GRGG + I +S+ + N+ F CG G P + P +
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKTAYPIDE 319
Query: 361 ALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
PA +I F +I N+ + F G+ E I NI +S+
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSM 364
>gi|293571108|ref|ZP_06682148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|431739345|ref|ZP_19528280.1| polygalacturonase [Enterococcus faecium E1972]
gi|291608838|gb|EFF38120.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|430596073|gb|ELB33930.1| polygalacturonase [Enterococcus faecium E1972]
Length = 445
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 174/345 (50%), Gaps = 24/345 (6%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP+G++LTG+ L S++ L L GAV+ S +P + +V + R + +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ--SLNYSRPHLVEFISSENVVVS 191
Y S I + ++ VTG GT+DG G WW F ++ +L Y RP L+ F + + V
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ + +P++ I+P+ CSN N+++ P +SP T GI P+S NV I +C I +G D
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 252 ISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++K+G ++ Y R ++ I + G V GSEMSG I N+ + ++
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DDDFDP--D 360
GI ++ +GRGG + I +S+ + N+ F CG G P + P +
Sbjct: 260 DRGIRLKSRRGRGGNVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKTAYPIDE 319
Query: 361 ALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
PA +I F +I N+ + F G+ E I NI +S+
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSM 364
>gi|409199011|ref|ZP_11227674.1| endopolygalacturonase [Marinilabilia salmonicolor JCM 21150]
Length = 568
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 196/435 (45%), Gaps = 84/435 (19%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
++VSI EFGAVGD T N AF AI + ++KGG ++ VP G WLTG + S++ L
Sbjct: 57 YAVSIVEFGAVGDAVTPNGEAFTRAI---EQVSEKGGGRVIVPRGIWLTGPIQMKSNINL 113
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTID 157
LE GAVI S N D P E L R S I+ + L ++ +TG NG ID
Sbjct: 114 HLEDGAVIRFSSN------FDEYPLIKTSFEGLDTYRCISPIHAHNLENIAITG-NGVID 166
Query: 158 GQGSVW------------WD---------------WFSSQS------------------- 171
G G W W W+ S+
Sbjct: 167 GNGDAWRPVKKSKMTPSQWKKLVQSGGVLSDDGKIWYPSEKSKAGDGRDNFNVPDFDNRD 226
Query: 172 -----LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPY 226
++ RP +V + +++ TF N+PA+NIHP+ +V I+N+++ P S
Sbjct: 227 AFEEVKDFLRPVMVSIKECKRILLDGPTFQNSPAWNIHPLMSEDVTIRNLTIRNPWYSQN 286
Query: 227 TVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSS 286
G+ +S NV I + +G DAI KSG +E G G PT +V ++ ++ G
Sbjct: 287 GDGLDLESCKNVVIYNNTFDVGDDAICFKSGKNEDGRRRGIPTENVIVKNNIVYHGHGGF 346
Query: 287 VAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI------- 339
V GSEMSG + NV V + G+ F++T+GRGG + I IS+ ++ +I
Sbjct: 347 VV-GSEMSGDVRNVHVSDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDMIDIPTEPIRF 405
Query: 340 NVAFGACGNCGSHPD-DDFDPDALPA------IDQITFKDIIGTNITI-----AGNFTGI 387
N+ +G GN D D+ P PA + +F++I NI A F G+
Sbjct: 406 NLFYG--GNAPVMDDGDNSAPSEEPAEAVSVTEETPSFRNIFMKNIRANGFGNAAFFMGL 463
Query: 388 QEAPFANICLSNISL 402
E N+ L N L
Sbjct: 464 PEMNLQNVHLENAVL 478
>gi|294617477|ref|ZP_06697109.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
gi|291596284|gb|EFF27545.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
Length = 363
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 182/366 (49%), Gaps = 24/366 (6%)
Query: 52 GKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQN 111
G +++ L + + + A GG + VP+G++LTG+ L S++ L L GAV+ S +
Sbjct: 8 GASIDELNTEAIQQAIDAAASDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDD 67
Query: 112 PSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ- 170
P + VV + R + + Y S I + ++ VTG GT+DG G WW F ++
Sbjct: 68 PKDYPVV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEP 121
Query: 171 -SLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVG 229
+L Y RP L+ F + + V ++ + +P++ I+P+ CSN N+++ P +SP T G
Sbjct: 122 DNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDG 181
Query: 230 IVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVA 288
I P+S NV I +C I +G D I++K+G ++ Y R ++ I + G V
Sbjct: 182 IDPESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHG-GVV 237
Query: 289 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA--- 345
GSEMSG I N+ + ++ GI ++ +GRGG + I +S+ + N+ F
Sbjct: 238 LGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLY 297
Query: 346 --CGNCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICL 397
CG G P + P + PA +I F +I N+ + F G+ E I
Sbjct: 298 YFCGPRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITF 357
Query: 398 SNISLS 403
NI +S
Sbjct: 358 DNIDVS 363
>gi|380695284|ref|ZP_09860143.1| polygalacturonase (Pectinase) [Bacteroides faecis MAJ27]
Length = 438
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 190/436 (43%), Gaps = 67/436 (15%)
Query: 8 LLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYL 67
+ L LC+A +++ E V + + GA +GK LNT I L
Sbjct: 1 MAFLCLCAATVLHAE-----------------RVDMLKIGAKANGKVLNTKLINTTIDRL 43
Query: 68 KSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRG 127
GG L+ P+G +LTGS L S++TL LE GA +L S N D + + G
Sbjct: 44 NR---NGGGTLFFPAGTYLTGSIRLKSNITLELEAGATLLFSDNFD--DYLPFVEVRHEG 98
Query: 128 IELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW----------------------- 164
+ + + ++ LI ++ + G+ GT+DGQG WW
Sbjct: 99 VMM--KSFQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMHDLNKYQP 155
Query: 165 -----------------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
D+ S+ + RP ++ + + V + + +N+P + ++P +
Sbjct: 156 MWDAENDTTAIYTETNKDYVSTLQRRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEF 215
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
C NV I+ I++ P SP T GI P+S NV I DC I++G D I++KSG D G
Sbjct: 216 CDNVTIKGITIDNVP-SPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGV 274
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
P ++ I + S G V GSEMSG + V + + GI ++T+GRGG +
Sbjct: 275 PCENITITNCTMLSGHG-GVVIGSEMSGSVRKVTISNCVFDGTERGIRIKSTRGRGGVVE 333
Query: 328 QIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGI 387
I +S+ + NI S + + P + + T++ G+
Sbjct: 334 DIRVSNIVMSNIKQEAVVLNLKYSPMPAEPKSERTPIFRNVHISGMTVTDVKTPIKIVGL 393
Query: 388 QEAPFANICLSNISLS 403
+EAP ++I L +I +
Sbjct: 394 EEAPISDIVLRDIHIQ 409
>gi|430842911|ref|ZP_19460818.1| polygalacturonase [Enterococcus faecium E1007]
gi|431064168|ref|ZP_19493515.1| polygalacturonase [Enterococcus faecium E1604]
gi|431131393|ref|ZP_19498944.1| polygalacturonase [Enterococcus faecium E1613]
gi|431602171|ref|ZP_19522547.1| polygalacturonase [Enterococcus faecium E1861]
gi|431742395|ref|ZP_19531288.1| polygalacturonase [Enterococcus faecium E2039]
gi|430492622|gb|ELA68986.1| polygalacturonase [Enterococcus faecium E1007]
gi|430565953|gb|ELB05076.1| polygalacturonase [Enterococcus faecium E1613]
gi|430568809|gb|ELB07839.1| polygalacturonase [Enterococcus faecium E1604]
gi|430589939|gb|ELB28031.1| polygalacturonase [Enterococcus faecium E1861]
gi|430600153|gb|ELB37811.1| polygalacturonase [Enterococcus faecium E2039]
Length = 445
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 174/345 (50%), Gaps = 24/345 (6%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP+G++LTG+ L S++ L L GAV+ S +P + +V + R + +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ--SLNYSRPHLVEFISSENVVVS 191
Y S I + ++ VTG GT+DG G WW F ++ +L Y RP L+ F + + V
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ + +P++ I+P+ CSN N+++ P +SP T GI P+S NV I +C I +G D
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 252 ISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++K+G ++ Y R ++ I + G V GSEMSG I N+ + ++
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DDDFDP--D 360
GI ++ +GRGG + I +S+ + N+ F CG G P + P +
Sbjct: 260 DRGIRLKSRRGRGGNVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKTAYPIDE 319
Query: 361 ALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
PA +I F +I N+ + F G+ E I NI +S+
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSM 364
>gi|294777094|ref|ZP_06742551.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|319643453|ref|ZP_07998076.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345517811|ref|ZP_08797274.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836521|gb|EET16830.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|294448963|gb|EFG17506.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|317384858|gb|EFV65814.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 446
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 179/405 (44%), Gaps = 50/405 (12%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V + + GA G+ LNT + I L + GG L+ P+G +LTGS ++ S++TL
Sbjct: 25 ERVDMQQAGADVQGRKLNTALINSTIDRLNAH---GGGTLFFPAGTYLTGSIHMKSNITL 81
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LE GA + S+N D + + GI + + ++ LI ++ + G+ GT+DG
Sbjct: 82 ELEAGATLKFSENFD--DFLPYVEVRHEGIMM--KSFQPLIYAVDAENITIKGE-GTLDG 136
Query: 159 QGSVWW----------------------------------------DWFSSQSLNYSRPH 178
QG WW DW + + RP
Sbjct: 137 QGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPP 196
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
+ I +NV V + +N+P + ++P +C NV I+ I++H P SP T GI P+S NV
Sbjct: 197 FIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITIHNVP-SPNTDGINPESCKNV 255
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
I DC I++G D I++KSG D G P ++ I + S G V GSEMSGG+
Sbjct: 256 HISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHG-GVVIGSEMSGGVK 314
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD 358
V + + GI ++T+GRGG + I +S+ + NI S +
Sbjct: 315 KVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMPAEPK 374
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
D P I + ++ G+ EAP I + ++ +
Sbjct: 375 SDRTPEFRNIYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|345516133|ref|ZP_08795626.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423227918|ref|ZP_17214324.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|423239050|ref|ZP_17220166.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
gi|423243178|ref|ZP_17224254.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|229434099|gb|EEO44176.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392637665|gb|EIY31531.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|392646053|gb|EIY39772.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|392647461|gb|EIY41162.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
Length = 446
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 179/405 (44%), Gaps = 50/405 (12%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V + + GA G+ LNT + I L + GG L+ P+G +LTGS ++ S++TL
Sbjct: 25 ERVDMQQAGADIQGRKLNTTLINSTIDRLNA---NGGGTLFFPAGTYLTGSIHMKSNITL 81
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LE GA + S+N D + + GI + + ++ LI ++ + G+ GT+DG
Sbjct: 82 ELEAGATLKFSENFD--DFLPYVEVRHEGIMM--KSFQPLIYAVDAENITIKGE-GTLDG 136
Query: 159 QGSVWW----------------------------------------DWFSSQSLNYSRPH 178
QG WW DW + + RP
Sbjct: 137 QGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPP 196
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
+ I +NV V + +N+P + ++P +C NV I+ I++H P SP T GI P+S NV
Sbjct: 197 FIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITIHNVP-SPNTDGINPESCKNV 255
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
I DC I++G D I++KSG D G P ++ I + S G V GSEMSGG+
Sbjct: 256 HISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHG-GVVIGSEMSGGVK 314
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD 358
V + + GI ++T+GRGG + I +S+ + NI S +
Sbjct: 315 KVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMPAEPK 374
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
D P I + ++ G+ EAP I + ++ +
Sbjct: 375 SDRTPEFRNIYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|150005260|ref|YP_001300004.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149933684|gb|ABR40382.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 446
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 179/405 (44%), Gaps = 50/405 (12%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V + + GA G+ LNT + I L + GG L+ P+G +LTGS ++ S++TL
Sbjct: 25 ERVDMQQAGADVQGRKLNTALINSTIDRLNAH---GGGTLFFPAGTYLTGSIHMKSNITL 81
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LE GA + S+N D + + GI + + ++ LI ++ + G+ GT+DG
Sbjct: 82 ELEAGATLKFSENFD--DFLPYVEVRHEGIMM--KSFQPLIYAVDAENITIKGE-GTLDG 136
Query: 159 QGSVWW----------------------------------------DWFSSQSLNYSRPH 178
QG WW DW + + RP
Sbjct: 137 QGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPP 196
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
+ I +NV V + +N+P + ++P +C NV I+ I++H P SP T GI P+S NV
Sbjct: 197 FIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITIHNVP-SPNTDGINPESCKNV 255
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
I DC I++G D I++KSG D G P ++ I + S G V GSEMSGG+
Sbjct: 256 HISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHG-GVVIGSEMSGGVK 314
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD 358
V + + GI ++T+GRGG + I +S+ + NI S +
Sbjct: 315 KVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMPAEPK 374
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
D P I + ++ G+ EAP I + ++ +
Sbjct: 375 SDRTPEFRNIYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|146301851|ref|YP_001196442.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156269|gb|ABQ07123.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 560
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 199/437 (45%), Gaps = 79/437 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+SV+I +FGAV G LNT AF +AI + + KGG ++ +P G WLTG L S++ L
Sbjct: 51 NSVNIKDFGAVNGGYVLNTKAFADAI---DAVSKKGGGKVIIPPGIWLTGPIILKSNIEL 107
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTID 157
E+GA+I S + S + P G E L R S I G L ++ TG NG D
Sbjct: 108 HAERGALIKFSTDKSLY------PIIGTNFEGLNTWRCISPIYGKNLENIAFTG-NGVWD 160
Query: 158 GQGSVW------------WD---------------WFSSQSL------------------ 172
G G VW W W+ S++
Sbjct: 161 GSGEVWRQVKKSKLTESQWKKFVSSGGVLNKDKTSWYPSETFMNASKGADQNVRPDLKTK 220
Query: 173 -------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
++ RP +V +S+ V+ F N+PA+NIHP ++ ++N++V P S
Sbjct: 221 EEFETIHDFLRPVMVSIQNSKRVLFDGPVFQNSPAWNIHPFMVEDLIVRNVTVRNPWYSQ 280
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
G+ + NV +E+ +G DAI +KSG D+ G+ G P ++ +R ++ G
Sbjct: 281 NGDGLDVECCKNVLVENSSFDVGDDAICIKSGKDKDGLERGIPCENIIVRNNIVYHGHG- 339
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI------ 339
V GSEMSGG+ N+ V + G+ F++ +GRGG + I ISD + +I
Sbjct: 340 GVTVGSEMSGGVKNLHVSNCTFMGTDVGLRFKSARGRGGVVENIFISDVFMTDIPSQAIS 399
Query: 340 -NVAFG--ACGNCGSHPDDDFDPDALP-AIDQITFKDIIGTNITIAGN-----FTGIQEA 390
N+ +G + D A+P I+ FK+I NITI G G+ E
Sbjct: 400 FNLYYGGKSIAETLEEGGDKIVNKAMPVTIETPQFKNISIKNITIKGAQQAVFLQGLPEM 459
Query: 391 PFANICLSNISLSINPG 407
NI +SN++++ G
Sbjct: 460 NLENIEISNLTVTAEKG 476
>gi|326797927|ref|YP_004315746.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548691|gb|ADZ77076.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 455
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 188/392 (47%), Gaps = 44/392 (11%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT++GA+ +T + A AI + GG + +P+G+WLTG +L S++ L L+K
Sbjct: 55 ITDYGALQGNQTATSKAITTAI---EKAHKLGGGIVVIPAGEWLTGKIHLKSNVNLHLDK 111
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
GA++L S+NP+ D + + S G+E Y LI Y +++ +TG G I + V
Sbjct: 112 GALLLFSENPA--DYLPAVHSSWEGMEC--YNYSPLIYAYECKNIAITGQ-GEIKAKMDV 166
Query: 163 WWDWFS------------------------SQSLN---YSRPHLVEFISSENVVVSNLTF 195
W WF+ Q +N + RP ++F SENV++ ++
Sbjct: 167 WETWFTRPKPHMESIKRLYNLASAYTPLEQRQMVNDTAHLRPQFIQFNRSENVLLEGISI 226
Query: 196 LNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLK 255
N+P + IH N+ I+N++V+A + G+ P+ S NV IE+C+ G DAI++K
Sbjct: 227 TNSPFWTIHTYLSKNIIIRNLNVYAHGHN--NDGVDPEMSQNVLIENCVFDQGDDAIAIK 284
Query: 256 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYD--SLNG 313
SG + G P+ ++ IR +++ +A GSE+SGGI NV V+ + D LN
Sbjct: 285 SGRNPEGWRLKAPSKNIIIRNCTVKNGH-QLIAIGSELSGGIENVFVDSCVVMDGAKLNH 343
Query: 314 IEFRTTKGR-GGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDA---LPAIDQIT 369
+ F T R GGY+R I S+ + I + + + P L I +
Sbjct: 344 LLFIKTNERMGGYVRNIYASNLQAGRIELGILGIETDVLYQWRNLVPTVERRLTPIKDVY 403
Query: 370 FKDIIGTNITIAGNFTGIQEAPFANICLSNIS 401
++ N+ G +E P NI L N+
Sbjct: 404 LNNVTAKNVQFVSRILGQKELPIENIVLKNVE 435
>gi|383113004|ref|ZP_09933785.1| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
gi|382948911|gb|EFS29452.2| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
Length = 444
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 192/443 (43%), Gaps = 67/443 (15%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
M + L+ L C+ ++ R V + + GA +GK LNT
Sbjct: 1 MNLRTTFLVFLCFCATTIL-----------------RAERVDMLKTGAKANGKALNTKLI 43
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ I L GG L+ P+G +LTGS +L S++TL LE GA +L S N D +
Sbjct: 44 NSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFD--DYLPF 98
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW---------------- 164
+ G+ + + ++ LI ++ + G+ GT+DGQG WW
Sbjct: 99 VEVRHEGVMM--KSFQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMR 155
Query: 165 ------------------------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
D+ ++ + RP ++ + + V + + +N+P
Sbjct: 156 DINKYQPMWDAANDTTAIYAETNKDYVTTLQRRFFRPLFIQPVRCKKVKIEGVKIINSPF 215
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+ ++P +C NV I+ I++ P SP T G+ P+S NV I DC I++G D I++KSG D
Sbjct: 216 WTVNPEFCDNVIIKGITIDNAP-SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDA 274
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G P ++ I + S G V GSEMSG + V + + GI ++T+
Sbjct: 275 QARRLGVPCENITITNCTMLSGHG-GVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTR 333
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI 380
GRGG + I +S+ + NI S + + P + + T++
Sbjct: 334 GRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTDVKT 393
Query: 381 AGNFTGIQEAPFANICLSNISLS 403
G++EAP ++I L +I +
Sbjct: 394 PIKIVGLEEAPISDIVLRDIHIQ 416
>gi|212694786|ref|ZP_03302914.1| hypothetical protein BACDOR_04320 [Bacteroides dorei DSM 17855]
gi|265750531|ref|ZP_06086594.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|212662640|gb|EEB23214.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|263237427|gb|EEZ22877.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 446
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 179/405 (44%), Gaps = 50/405 (12%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V + + GA G+ LNT + I L + GG L+ P+G +LTGS ++ S++TL
Sbjct: 25 ERVDMQQAGADIQGRKLNTALINSTIDRLNA---NGGGTLFFPAGTYLTGSIHMKSNITL 81
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LE GA + S+N D + + GI + + ++ LI ++ + G+ GT+DG
Sbjct: 82 ELEAGATLKFSENFD--DFLPYVEVRHEGIMM--KSFQPLIYAVDAENITIKGE-GTLDG 136
Query: 159 QGSVWW----------------------------------------DWFSSQSLNYSRPH 178
QG WW DW + + RP
Sbjct: 137 QGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPP 196
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
+ I +NV V + +N+P + ++P +C NV I+ I++H P SP T GI P+S NV
Sbjct: 197 FIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITIHNVP-SPNTDGINPESCKNV 255
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
I DC I++G D I++KSG D G P ++ I + S G V GSEMSGG+
Sbjct: 256 HISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHG-GVVIGSEMSGGVK 314
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD 358
V + + GI ++T+GRGG + I +S+ + NI S +
Sbjct: 315 KVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMPAEPK 374
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
D P I + ++ G+ EAP I + ++ +
Sbjct: 375 SDRTPEFRNIYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|423311776|ref|ZP_17289713.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
gi|392689891|gb|EIY83166.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
Length = 446
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 179/405 (44%), Gaps = 50/405 (12%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V + + GA G+ LNT + I L + GG L+ P+G +LTGS ++ S++TL
Sbjct: 25 ERVDMQQAGADIQGRKLNTALINSTIDRLNAH---GGGTLFFPAGTYLTGSIHMKSNITL 81
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LE GA + S+N D + + GI + + ++ LI ++ + G+ GT+DG
Sbjct: 82 ELEAGATLKFSENFD--DFLPYVEVRHEGIMM--KSFQPLIYAVDAENITIKGE-GTLDG 136
Query: 159 QGSVWW----------------------------------------DWFSSQSLNYSRPH 178
QG WW DW + + RP
Sbjct: 137 QGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPP 196
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
+ I +NV V + +N+P + ++P +C NV I+ I++H P SP T GI P+S NV
Sbjct: 197 FIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITIHNVP-SPNTDGINPESCKNV 255
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
I DC I++G D I++KSG D G P ++ I + S G V GSEMSGG+
Sbjct: 256 HISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHG-GVVIGSEMSGGVK 314
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD 358
V + + GI ++T+GRGG + I +S+ + NI S +
Sbjct: 315 KVTISNCIFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMRNIKKEAIVLNLKYSKMPAEPK 374
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
D P I + ++ G+ EAP I + ++ +
Sbjct: 375 SDRTPEFRNIYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|383120469|ref|ZP_09941197.1| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
gi|382985005|gb|EES68560.2| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
Length = 528
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 203/423 (47%), Gaps = 68/423 (16%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA+ DG TLNT A NAI K+ KGG ++ +P G WLTG L S++ L
Sbjct: 57 YEVNIRDFGALSDGVTLNTEAINNAI---KAVNSKGGGKVIIPEGLWLTGPVVLLSNVNL 113
Query: 99 FLEKGAVILGSQNPSHWDVVD-------------PLPSY--------GRGI-ELPGRRYK 136
+ EK A+I+ S + S + ++D P+ + G G+ + G R++
Sbjct: 114 YAEKNALIVFSSDTSLYPIIDTSFEGLDTKRCQSPISAMNAENIAITGSGVFDGAGDRWR 173
Query: 137 SLINGYML----RDVVVTGDNGTIDGQGSVWW-------------------------DWF 167
+ M +++V +G G +D G VW+ +W
Sbjct: 174 PVKKDKMTERQWKNLVSSG--GKVDENGKVWYPDAGALKASVLMTGQNNGQKEITDEEWT 231
Query: 168 SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
+S + RP ++ + S+ +++ +TF N+P + IHP+ C ++ + ++ V P S
Sbjct: 232 YMKS--WLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNG 289
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV 287
+ +S NV + +C G DAI LKSG DE G G P +V I+ + G V
Sbjct: 290 DALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLHGHGGFV 349
Query: 288 AFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACG 347
GSEMSGG+ NV V + G+ F++T+GRGG + I I + + I++ A
Sbjct: 350 -IGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINM--IDIPNDALT 406
Query: 348 NCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSNI 400
+ +D +P +++ T F++I +N+ G F G+ E P NI + N+
Sbjct: 407 MDLYYAVNDSPETPIPDVNEETPVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNIFIKNM 466
Query: 401 SLS 403
+++
Sbjct: 467 TVT 469
>gi|448394041|ref|ZP_21567906.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
gi|445662631|gb|ELZ15395.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
Length = 518
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 177/394 (44%), Gaps = 38/394 (9%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
P I E+GA GD +T A Q A L A+ GG +YVPSG ++TG +
Sbjct: 4 PDTDGFDIREYGATGDSDEPDTEAIQAA---LDECAESGGT-VYVPSGTYVTGPLRVGDR 59
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
TL+L+ GA + Q ++ + S G G L++ +V +TG GT
Sbjct: 60 TTLYLDAGATL---QFVGDYEAFPTVQSRWEGWNQYGFHPCLLVDD--AENVSITG-RGT 113
Query: 156 IDGQGSVWWDWFSS----------------QSLNYS---------RPHLVEFISSENVVV 190
IDG G WW ++ + + N RP L + SENV V
Sbjct: 114 IDGGGEYWWQFYDAPESEIPDGLQERLAEFEEKNEKQDDVSSFTHRPPLFQIYGSENVSV 173
Query: 191 SNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHD 250
S +T N+P +N H VY NV I ++++ P ++P GI DSS V I D I G D
Sbjct: 174 SGVTLENSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSRYVRISDTYINAGDD 233
Query: 251 AISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
AI +KSG + G G P + + + +++ G V GSEMSG + +V V D+
Sbjct: 234 AICIKSGKNAEGREVGEPASQITVTNCTVEAGHG-GVVIGSEMSGDVRDVTVTNCTFTDT 292
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP--DALPAIDQI 368
G+ +T + RGG + + + + I F G D D +P + P + +
Sbjct: 293 DRGVRIKTARNRGGVVEDLRFDNIVMRRIACPFTINGYYFMPLDSDSEPVDEGTPMVRNV 352
Query: 369 TFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 402
+F +I + AG F G+ E F I S++ +
Sbjct: 353 SFTNITARQVETAGFFAGLPEQYFEGISFSDVQI 386
>gi|154502614|ref|ZP_02039674.1| hypothetical protein RUMGNA_00427 [Ruminococcus gnavus ATCC 29149]
gi|153796806|gb|EDN79226.1| polygalacturonase (pectinase) [Ruminococcus gnavus ATCC 29149]
Length = 532
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 194/396 (48%), Gaps = 35/396 (8%)
Query: 35 DPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTS 94
D + +++++ +FGA GDG +T Q AI +++ +P G + S L
Sbjct: 85 DTQDYTLNVRDFGAKGDGVQDDTTYIQAAIMSCPR-----NSRVLIPEGTYRVTSLFLKD 139
Query: 95 HLTLFLEKGAVILGSQNPSHWDVV-------DPLPSYGRGI--ELPGRRYKSLINGYMLR 145
HLT+ L KGAV+ + ++ D Y G + ++NG ++
Sbjct: 140 HLTMELAKGAVLSAYTERERFSILRGTYQSEDQENEYILGTWEGEAQNMFAGIMNGIGIK 199
Query: 146 DVVVTGDNGTIDGQGSVWWDWF--SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNI 203
DV + G+ GTIDG S W +W+ + + +RP ++ E+V ++ +T N+P++NI
Sbjct: 200 DVTICGE-GTIDGNAS-WENWWLDAKEVRGAARPRMIFLNRCEDVTITGITVQNSPSWNI 257
Query: 204 HPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGI 263
HP +CS++ ++V P SP T G+ P+S D+V I C+ ++G D I++K+G G
Sbjct: 258 HPYFCSHLKFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIAVKAGKISVGA 317
Query: 264 AYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG 323
Y P++++ IR+ ++ G S+ GSEM+ GI N+Q + ++ G+ +T +GRG
Sbjct: 318 KYKVPSSNIRIRQCCMRDGHG-SITLGSEMAAGIKNLQARQCVFLNTDRGLRIKTRRGRG 376
Query: 324 --GYIRQIVISDAEL---------YNINVAFGACGNCGSHPDDDFDPDAL----PAIDQI 368
I I+ D + + IN + + S +P A+ P I ++
Sbjct: 377 KDAVIDGILFEDIRMDSVLTLLTPFVINSFYFCDPDGHSEYVQCKEPLAVDERTPQIKEL 436
Query: 369 TFKDIIGTNITIAGN-FTGIQEAPFANICLSNISLS 403
F++I N +A F G+ E + + +I +S
Sbjct: 437 CFRNIQAKNCHVAAAFFYGLPEQKIERVEMKHIQVS 472
>gi|295084333|emb|CBK65856.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 430
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 180/397 (45%), Gaps = 50/397 (12%)
Query: 47 GAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVI 106
GA +GKTLNT + I L GG L+ P+G +LTGS +L S++TL LE GA +
Sbjct: 5 GAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATL 61
Query: 107 LGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW-- 164
L S N D + + G+ + + ++ LI ++ + G+ GT+DGQG WW
Sbjct: 62 LFSDNFD--DYLPFVEVRHEGVMM--KSFQPLIYAVDAENITIKGE-GTLDGQGKKWWME 116
Query: 165 --------------------------------------DWFSSQSLNYSRPHLVEFISSE 186
D+ ++ + RP ++ + +
Sbjct: 117 FFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCK 176
Query: 187 NVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIA 246
V + + +N+P + ++P +C NV I+ I++ P SP T G+ P+S NV I DC I+
Sbjct: 177 KVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP-SPNTDGVNPESCRNVHISDCHIS 235
Query: 247 MGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIH 306
+G D I++KSG D G P ++ I + S G V GSEMSG + V +
Sbjct: 236 VGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSEMSGSVRKVTISNCV 294
Query: 307 LYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAID 366
+ GI ++T+GRGG + I +S+ + NI S + + P
Sbjct: 295 FDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIFR 354
Query: 367 QITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
+ + TN+ G++EAP ++I L +I +
Sbjct: 355 NVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ 391
>gi|427387085|ref|ZP_18883141.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
gi|425725690|gb|EKU88559.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
Length = 534
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/444 (28%), Positives = 201/444 (45%), Gaps = 83/444 (18%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGS 89
+QPT P ++VSI EFGA GDG LNT A +AI K+ KGG ++ +P G WLTG
Sbjct: 49 EQPTF-PN-YTVSIVEFGAKGDGIMLNTKAINDAI---KAVNAKGGGKVVIPEGLWLTGP 103
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVV 148
L S++ L+ E A+IL + D + P E L RR +S I+ + ++
Sbjct: 104 IELLSNVNLYTEMNALILFT------DDFEAYPIIKTSFEGLDTRRCQSPISAWNAENIA 157
Query: 149 VTG-----------------------------DNGTIDGQGSVWW-------DWFSSQSL 172
+TG G +D GS+W+ +++
Sbjct: 158 ITGHGVFDGSGDSWRPVKKGKLTSGQWSSLVKSGGVVDESGSIWYPTAGALKGAMATKDF 217
Query: 173 N----------------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
N + RP L+ + S+ V++ +TF N+P++ +HP+ C ++ I N+
Sbjct: 218 NNPEGIETDEEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNV 277
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
V P S + +S N I + I G DAI +KSG DE G G P +V ++
Sbjct: 278 KVFNPWYSQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN 337
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ G V GSEMSGG+ NV V + G+ F++T+GRGG + I I + +
Sbjct: 338 NTVLHGHGGFVV-GSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM 396
Query: 337 YNI-------NVAFGACGNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN- 383
+I ++ +G G G +DD + +T F+DI TNIT G
Sbjct: 397 IDIPHEALLFDLFYGGKG-AGEETEDDLAGRMKATVPPVTEETPAFRDIHITNITCKGAG 455
Query: 384 ----FTGIQEAPFANICLSNISLS 403
F G+ E P N+ + ++ ++
Sbjct: 456 RAMFFNGLPEMPIRNVHVKDVVVT 479
>gi|261207232|ref|ZP_05921921.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289567172|ref|ZP_06447562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|294614352|ref|ZP_06694269.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430850281|ref|ZP_19468044.1| polygalacturonase [Enterococcus faecium E1185]
gi|260078860|gb|EEW66562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289161031|gb|EFD08941.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|291592824|gb|EFF24416.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430535906|gb|ELA76297.1| polygalacturonase [Enterococcus faecium E1185]
Length = 445
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 173/345 (50%), Gaps = 24/345 (6%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP+G++LTG+ L S++ L L GAV+ S +P + VV + R + +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ--SLNYSRPHLVEFISSENVVVS 191
Y I + ++ VTG GT+DG G WW F ++ +L Y RP L+ F + + V
Sbjct: 85 VYAFCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ + +P++ I+P+ CSN N+++ P +SP T GI P+S NV I +C I +G D
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 252 ISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++K+G ++ Y R ++ I + G V GSEMSG I N+ + ++
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DDDFDP--D 360
GI ++ +GRGG + I +S+ + N+ F CG G P + P +
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDE 319
Query: 361 ALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
PA +I F +I N+ + F G+ E I NI +S+
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSM 364
>gi|333897861|ref|YP_004471735.1| polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113126|gb|AEF18063.1| Polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 518
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 190/401 (47%), Gaps = 47/401 (11%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
P +++ +FGAVGDGK L+T + Q AI A G ++Y P G +LT L S+
Sbjct: 79 PETAYINVKDFGAVGDGKRLDTFSIQAAIM-----ACPDGGRVYFPEGVYLTYPIFLKSN 133
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPG-----------RRYKSLINGYML 144
+T+ L KGAV+LG++ + + LP E + SLI G +
Sbjct: 134 ITIELGKGAVLLGAKGREMYPI---LPGEIDSQEFKNGYLGSWEGETNNMFASLITGISV 190
Query: 145 RDVVVTGDNGTIDGQGS--VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYN 202
+V + GD G IDG S WW + + + RP V +NV++ +T N+P++
Sbjct: 191 ENVNIIGD-GIIDGNSSFDTWWQDAKVKRIAW-RPRTVYLNKCKNVLIEGITIKNSPSWT 248
Query: 203 IHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYG 262
IHP+ N+ N+++ P ++P T G+ P+S +V I ++G D I++KSG
Sbjct: 249 IHPLMSQNLKFVNLNIENPKDAPNTDGLDPESCKDVLIVGTRFSVGDDCIAIKSGKLSVS 308
Query: 263 IAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGR 322
P+ ++ IR L++ G +V GSEMSGG+ NV VE + GI +T +GR
Sbjct: 309 QKLPMPSENLIIRNCLMEYGHG-AVVIGSEMSGGVKNVHVENCIFRKTDRGIRIKTRRGR 367
Query: 323 G--GYIRQIVISDAEL------YNINVAFGACGNCGSH---------PDDDFDPDALPAI 365
G G I +I S+ + + IN +F C G P D D P +
Sbjct: 368 GKTGVIDEIHASNIRMEGVLTPFTIN-SFYFCDADGKTEYVWSKEKLPVD----DRTPYV 422
Query: 366 DQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSIN 405
I KDI + +A + G+ E + + NI +S +
Sbjct: 423 GNIYLKDITCIDTQVAAGYMYGLPERKIERVDMENIYVSFD 463
>gi|257883307|ref|ZP_05662960.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|294622157|ref|ZP_06701229.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|424791201|ref|ZP_18217679.1| polygalacturonase [Enterococcus faecium V689]
gi|424796708|ref|ZP_18222399.1| polygalacturonase [Enterococcus faecium S447]
gi|424949492|ref|ZP_18365160.1| polygalacturonase [Enterococcus faecium R496]
gi|424953665|ref|ZP_18368614.1| polygalacturonase [Enterococcus faecium R494]
gi|424956671|ref|ZP_18371436.1| polygalacturonase [Enterococcus faecium R446]
gi|424968083|ref|ZP_18381741.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994459|ref|ZP_18406396.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998609|ref|ZP_18410283.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001105|ref|ZP_18412635.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005198|ref|ZP_18416463.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011663|ref|ZP_18422546.1| polygalacturonase [Enterococcus faecium E422]
gi|425017819|ref|ZP_18428304.1| polygalacturonase [Enterococcus faecium C621]
gi|425032259|ref|ZP_18437327.1| polygalacturonase [Enterococcus faecium 515]
gi|425039369|ref|ZP_18443912.1| polygalacturonase [Enterococcus faecium 513]
gi|431777897|ref|ZP_19566138.1| polygalacturonase [Enterococcus faecium E2560]
gi|431783614|ref|ZP_19571712.1| polygalacturonase [Enterococcus faecium E6012]
gi|431786798|ref|ZP_19574796.1| polygalacturonase [Enterococcus faecium E6045]
gi|257818965|gb|EEV46293.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|291598326|gb|EFF29415.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|402919867|gb|EJX40428.1| polygalacturonase [Enterococcus faecium V689]
gi|402922635|gb|EJX42996.1| polygalacturonase [Enterococcus faecium S447]
gi|402934197|gb|EJX53567.1| polygalacturonase [Enterococcus faecium R496]
gi|402938569|gb|EJX57565.1| polygalacturonase [Enterococcus faecium R494]
gi|402945367|gb|EJX63722.1| polygalacturonase [Enterococcus faecium R446]
gi|402952945|gb|EJX70709.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980034|gb|EJX95667.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982456|gb|EJX97919.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987170|gb|EJY02259.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987432|gb|EJY02495.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995999|gb|EJY10409.1| polygalacturonase [Enterococcus faecium E422]
gi|403003645|gb|EJY17529.1| polygalacturonase [Enterococcus faecium C621]
gi|403013568|gb|EJY26654.1| polygalacturonase [Enterococcus faecium 515]
gi|403016115|gb|EJY28950.1| polygalacturonase [Enterococcus faecium 513]
gi|430638501|gb|ELB74432.1| polygalacturonase [Enterococcus faecium E2560]
gi|430644798|gb|ELB80379.1| polygalacturonase [Enterococcus faecium E6012]
gi|430644949|gb|ELB80513.1| polygalacturonase [Enterococcus faecium E6045]
Length = 445
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 174/346 (50%), Gaps = 26/346 (7%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP+G++LTG+ L S++ L L GAV+ S +P + VV + R + +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ--SLNYSRPHLVEFISSENVVVS 191
Y S I + ++ VTG GT+DG G WW F ++ +L Y RP L+ F + + V
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ + +P++ I+P+ CSN N+++ P +SP T GI P+S NV I +C I +G D
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 252 ISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++K+G ++ Y R ++ I + G V GSEMSG I N+ + ++
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHPDDDFDPDALP-- 363
GI ++ +GRGG + I +S+ + N+ F CG G P ++ A P
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEP-YVWEKKAYPID 318
Query: 364 ----AIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
A +I F +I N+ + F G+ E I NI +S+
Sbjct: 319 ERTSAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSM 364
>gi|325103049|ref|YP_004272703.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971897|gb|ADY50881.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 526
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 187/396 (47%), Gaps = 41/396 (10%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++T++GA D L T A + AI GG +Y P+GK+LTG +L S++T+F++
Sbjct: 28 NVTKYGAKNDSSRLATDAIKKAIDAAAKV---GGGTVYFPAGKYLTGPIHLKSNITIFID 84
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GA + S N H+ + +PS G E+ + L + ++ + G G IDG G
Sbjct: 85 AGAELHFSDNFDHY--LPMVPSRWEGTEVIN--FSPLFYAKDVENIAIVG-RGLIDGHGK 139
Query: 162 VWW--------------DWFSS-QSLN---------------YSRPHLVEFISSENVVVS 191
WW W + LN + RP ++F++ +NV +
Sbjct: 140 NWWRFSEVEVKKLTEDSKWQKEFKRLNPNVLAPDLPGWIERGFLRPPFIQFMNCKNVQIK 199
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ N+P + I+P YC NV + I++ PP SP T GI P+S NV I +C I++G D
Sbjct: 200 DIKIQNSPFWTINPQYCDNVTVDGITIDNPP-SPNTDGINPESCRNVRIANCHISVGDDC 258
Query: 252 ISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL 311
I++KSG D G P + I + G V GSEMSGG+ N+ + +
Sbjct: 259 ITIKSGKDRSGRKVNIPAENYTITNCTMLRGHG-GVVIGSEMSGGVKNIAITNCIFDGTD 317
Query: 312 NGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFK 371
GI ++ +GRGG + I +S+ + NI + + + + P I
Sbjct: 318 RGIRIKSARGRGGVVEDIRVSNIIMRNIRDQAIVLDLQYAKTNPEPISERTPIFRNIHIS 377
Query: 372 DIIGTNITIAGNFTGIQEAPFANICLSNISLSINPG 407
DI + AG G++E P +NI +N++++ N G
Sbjct: 378 DITAST-NRAGYLNGLEELPISNISFNNVNMTANTG 412
>gi|337750378|ref|YP_004644540.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
KNP414]
gi|336301567|gb|AEI44670.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus KNP414]
Length = 530
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 194/440 (44%), Gaps = 78/440 (17%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
QP++ R S S+T++GAVGDG T NT AF AI + + GG ++ +P+G WLTG
Sbjct: 20 QPSIPDR--SFSVTDYGAVGDGVTDNTEAFHKAI---AACSQAGGGRVVIPAGVWLTGPL 74
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
+L S L L + GA++L S+ + ++ + + P R +S ++G L V +T
Sbjct: 75 SLASRLDLHAQAGALVLFSRRFEDYPMI-----FSQYEGQPSIRCQSPLDGEGLEHVAIT 129
Query: 151 GDNGTIDGQGSVW-----WD-----------------------WFSSQSLN--------- 173
G G DG G W W W S ++N
Sbjct: 130 G-AGVFDGGGDAWRPVKDWKMTEKHWAKLIASGGVVDEAAGMWWPSEAAMNGPAKVAQLK 188
Query: 174 ---------------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISV 218
Y RP+L+ + V++ TF N+PA+N+HP C +V ++ ++V
Sbjct: 189 REGSTDPKDYEAARDYLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTV 248
Query: 219 HAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVL 278
P G+ DS +EDC +G DAI +KSG DE G G P D+ IR
Sbjct: 249 RNPWYGQNGDGLDLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRELGIPCEDILIRNCR 308
Query: 279 LQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYN 338
+ G V GSEMSGG+ ++VE + G+ F++T+GRGG + I I E
Sbjct: 309 VYHGHGGFV-IGSEMSGGVRRLRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEI---ERIR 364
Query: 339 INVAFGAC--------GNCGSH-PDDDFDPDAL--PAIDQITFKDIIGTNITIAGNFTGI 387
+N G G GS ++ P ++ P IT +D+ A G+
Sbjct: 365 MNSIVGEAISFHLFYEGKEGSGVAGENIVPVSVETPIFRGITIRDVQCAGAETALLINGL 424
Query: 388 QEAPFANICLSNISLSINPG 407
E P + + N + S G
Sbjct: 425 PEMPLDGLVVENFTASAKRG 444
>gi|430860956|ref|ZP_19478551.1| polygalacturonase [Enterococcus faecium E1573]
gi|430551274|gb|ELA91043.1| polygalacturonase [Enterococcus faecium E1573]
Length = 445
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 173/345 (50%), Gaps = 24/345 (6%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP+G++LTG+ L S++ L L GAV+ S +P + VV + R + +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ--SLNYSRPHLVEFISSENVVVS 191
Y S I + ++ VTG GT+DG WW F ++ +L Y RP L+ F + + V
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNEKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ + +P++ I+P+ CSN N+++ P +SP T GI P+S NV I +C I +G D
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 252 ISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++K+G ++ Y R ++ I + G V GSEMSG I N+ + ++
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DDDFDP--D 360
GI ++ +GRGG + I +S+ + N+ F CG G P + P +
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDE 319
Query: 361 ALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
PA +I F +I N+ + F G+ E I NI +S+
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSM 364
>gi|89098529|ref|ZP_01171412.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
gi|89086774|gb|EAR65892.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
Length = 443
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 179/365 (49%), Gaps = 29/365 (7%)
Query: 55 LNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSH 114
L T Q AI GG ++ +P+G++LTG L ++ L LE GA + S
Sbjct: 16 LATEGIQKAI---DEAYQNGGGKVVIPAGEFLTGPLFLKDNIELHLENGAHLKFSDKQED 72
Query: 115 WDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSS--QSL 172
+ VV S G++ + Y S + R++ VTG GTIDG G WWD F + + L
Sbjct: 73 YPVV---TSRWEGVKR--KVYASCLFAEGARNIAVTG-FGTIDGNGMEWWDVFRNRREEL 126
Query: 173 NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVP 232
Y RP L+ F E++ + ++ +N+P++ ++P+ C ++ + N+S+ P +SP T GI P
Sbjct: 127 KYPRPKLISFDHCEHITLRDVRLINSPSWTVNPICCRDITVDNVSILNPADSPNTDGIDP 186
Query: 233 DSSDNVCIEDCIIAMGHDAISLKSGWD--EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFG 290
+S NV I +C I +G D I++KSG + E +A ++ I + G +V FG
Sbjct: 187 ESCRNVRISNCHIDVGDDCIAIKSGTEDTEERVA----CENITITNCTMVHGHG-AVVFG 241
Query: 291 SEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAF--GACGN 348
SEMSG I NV + D+ GI F++ +GRGG + + + + + + F
Sbjct: 242 SEMSGDIRNVTISNCVFQDTDRGIRFKSRRGRGGVVEDVRVDNIVMEGVICPFIINLYYF 301
Query: 349 CGSHPDDDFDPDA--------LPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSN 399
CG D + D P ++ F +I N+ AG G+ E +I S
Sbjct: 302 CGPRGKDQYVWDKNPYPVTAETPMFRRLHFANITARNVHASAGYIYGLAEQYATDITFSQ 361
Query: 400 ISLSI 404
I +S+
Sbjct: 362 IDISL 366
>gi|423223572|ref|ZP_17210041.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638197|gb|EIY32044.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 551
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 241/526 (45%), Gaps = 88/526 (16%)
Query: 2 KMPVALLLLLALCSAILINGEVSDGQCD---DQPTLDPRP----HSVSITEFGAVGDGKT 54
++ + L ++++ S L+ ++ D D + P ++ RP ++ +T+FG GDG T
Sbjct: 4 QLLIFLFIIMSFSSMKLLAKDMKDIYRDLPFEMPVIE-RPVIPDLNICLTDFGGSGDGVT 62
Query: 55 LNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSH 114
LN+ AF+ AI YL A KGG +L VP G WLTG L +++ L L ++++ SQ+ S
Sbjct: 63 LNSEAFEKAIQYL---ASKGGGRLIVPQGVWLTGPIELENNVELHLSDNSIVVFSQDKSL 119
Query: 115 WDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVW----------- 163
+ +V+ + + R K ++ +V VTG G IDG G +W
Sbjct: 120 YPIVETVFEGCKTF-----RCKPQLSAVRKSNVAVTG-KGIIDGAGDIWRLGKKNEMPPM 173
Query: 164 -WD---------------WFSSQSL-------------------------NYSRPHLVEF 182
W+ W+ ++S ++ RP +V F
Sbjct: 174 VWNECIQSGGILSEDGELWYPTESYYRGAKDAIQNIVPWAKTMEDFESVRDFLRPVMVNF 233
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
+ V++ + F N+P +N+H ++ + NI+V P + GI +S N+ + D
Sbjct: 234 RECDGVLLEGIVFQNSPCWNVHLSLSRDIIVHNIAVRCPWYAKNGDGIDIESCTNLLLTD 293
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQV 302
+G DAI +KSG DE G G P +++ + + G V GSEMSGG+ N+ V
Sbjct: 294 SWFDVGDDAICIKSGKDEEGRRRGIPASNIIVDNCVCYHGHGGFVV-GSEMSGGVKNIAV 352
Query: 303 EKIHLYDSLNGIEFRTTKGRGG-----YIRQIVISD--AELYNINVAFGACGNCGSHPDD 355
+ G+ F++ +GRGG YI+ I+++D +E ++ +G + P+
Sbjct: 353 SNCRFSGTDVGLRFKSKRGRGGVVENIYIKNIMMNDIVSEALLFDLFYGKRVSV-KLPEQ 411
Query: 356 DFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSNISLSINPGS 408
D D A A D+ T FKDI + +T G F G+ E N+ + + + + G+
Sbjct: 412 DEDMIAFDA-DETTPQFKDIYISQVTCHGAKRAMLFNGLPEMNVRNVFIEDCHIYADEGA 470
Query: 409 YNSWECSNIHGSSESVFPEPCPELE-NSSSNSSSTCFSLIRYYGRA 453
E +N++ + V P+ P L N+ + + F R G A
Sbjct: 471 -KIHEATNVNLRNVMVTPKSGPALMLNNVKDLTVIGFQCRRIDGNA 515
>gi|399032800|ref|ZP_10732032.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398068822|gb|EJL60216.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 456
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 192/406 (47%), Gaps = 46/406 (11%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADK-GGAQLYVPSGKWLTGSFNLTSHLTLFL 100
SI +FGAV K + A AI S A+K GG + +P G+WLT + S++ L L
Sbjct: 54 SIVDFGAVQGNKNKTSEAINKAI----SKANKAGGGVVVIPEGEWLTKKIHFKSNVNLHL 109
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
KGAV+L S+ P D + + S G E Y LI Y +++ +TG+ G + +
Sbjct: 110 NKGAVLLFSETPD--DYLPAVNSTWEGYEC--YNYSPLIYAYKCKNIAITGE-GELKAKM 164
Query: 161 SVWWDWFS------------------------SQSLNYS---RPHLVEFISSENVVVSNL 193
+W +WF+ Q +N S RP ++F EN+++ +
Sbjct: 165 DIWKEWFARPKAHMESLKRLYFLASYNKPMKERQMVNDSAHFRPQFIQFNRCENILMDGV 224
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
T N+P + IHP +V ++N+ V+A + G+ P+ S NV IE+CI G DAI+
Sbjct: 225 TITNSPFWTIHPFLSKDVVLRNLKVYAHGHN--NDGVDPEMSQNVLIENCIFDQGDDAIA 282
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYD--SL 311
+KSG ++ + ++ +R +++ VA GSE+SGGI NV ++ + D L
Sbjct: 283 IKSGSNQDAWRLNTSSKNIVMRNCTVKNGH-QLVAIGSELSGGIENVFIDNCTVVDGAKL 341
Query: 312 NGIEF-RTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP---DALPAIDQ 367
N + F +T + RGGY+ I +S+ I+ + D P L I
Sbjct: 342 NHLLFIKTNERRGGYVSNIYMSNIVSGKIDAGILGIDTDVLYQWRDLVPTIERRLTPIKN 401
Query: 368 ITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWE 413
I +I TN+ +G +E P NI L N+++ + G N E
Sbjct: 402 IYLDNIKATNVKFISKISGQKELPVENIFLKNVTVDVVQGDQNIHE 447
>gi|409100257|ref|ZP_11220281.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 557
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 198/438 (45%), Gaps = 77/438 (17%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
+ + SI FGA GDG ++NT + AI + + KGG + +P G WLTG L S++
Sbjct: 43 KADTTSIVSFGAKGDGVSMNTESINKAI---AAVSQKGGGVVLIPGGLWLTGPIELKSNV 99
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
L L++ A++ + + + + +V+ G P R +S I+G L+++ +TG +G I
Sbjct: 100 NLHLKRDALLQFTDDFNQYKLVE-----GNWEGQPAWRNQSPISGTDLQNIAITG-SGII 153
Query: 157 DGQGSVW------------WD---------------WFSSQSL----------------- 172
DG G W W W+ S+
Sbjct: 154 DGNGGAWRMVKRDKLTESQWKKLTTSGGLVSEDGKMWYPSEKTFKGSKTKNAGVVAAGQS 213
Query: 173 --------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES 224
++ RP+L+ + + +++ +TF N+PA+N+HP+ C ++ ++N+ V P +
Sbjct: 214 AADLQSIKDFLRPNLLVLTNCKQILLEGVTFQNSPAWNLHPLLCEDLTLRNLQVKNPWFA 273
Query: 225 PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSG 284
G+ +S NV IE +G D I +KSG DE G G+PT +V IR ++ + G
Sbjct: 274 QNGDGVDVESCKNVLIEGSTFDVGDDGICIKSGRDEAGRKRGKPTENVIIRNNVVYHAHG 333
Query: 285 SSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI----- 339
V GSEMSGG N+ V + GI F+TT+GRGG + I I++ + +I
Sbjct: 334 GFVV-GSEMSGGAKNIWVYDCSFIGTDIGIRFKTTRGRGGVVEDIYINNINMIDIPGEAI 392
Query: 340 --NVAFGA------CGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQE 389
++ + A G P +A P I KD++ A G+ E
Sbjct: 393 LFDMYYAAVDPIVLAGEKREAIKTVVVPVTEATPQFKNIYIKDVVANGAEKAIFVRGLPE 452
Query: 390 APFANICLSNISLSINPG 407
+I L N+++ G
Sbjct: 453 MNIKDIYLENVTIQAKKG 470
>gi|224538252|ref|ZP_03678791.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221595|ref|ZP_17208065.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520112|gb|EEF89217.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645922|gb|EIY39642.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 534
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 202/435 (46%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
++V+I +FGA GDG LNT A +AI K+ KGG ++ +P G WLTG L S++ L
Sbjct: 56 YTVNIVDFGAKGDGIVLNTKAINDAI---KAVNAKGGGKVIIPEGLWLTGPIELLSNVNL 112
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTG------ 151
+ E A++L + D + P E L RR +S I+ + ++ +TG
Sbjct: 113 YTEMNALVLFT------DDFEAYPIIKTSFEGLDTRRCQSPISAWNAENIAITGHGVFDG 166
Query: 152 -----------------------DNGTIDGQGSVWW-------------DWFSSQSLN-- 173
G +D GS+W+ D+ + + +N
Sbjct: 167 SGDSWRPVKKGKLTAGQWSSLVSSGGVVDASGSIWYPTAGALKGAMATKDFNNPEGINTD 226
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ + S+ V++ +TF N+P++ +HP+ C ++ I N+ V P S
Sbjct: 227 EEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQ 286
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
+ +S N I + I G DAI +KSG DE G G P +V ++ + G
Sbjct: 287 NGDALDLESCKNALIVNNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGG 346
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI------ 339
V GSEMSGG+ NV V + G+ F++T+GRGG + I I + + +I
Sbjct: 347 FVV-GSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINMIDIPHEALL 405
Query: 340 -NVAFGACGNCGSHPDDDFD---PDALPAIDQIT--FKDIIGTNITI-----AGNFTGIQ 388
++ +G G G +DD + ++P + + T F+DI TN+T A F G+
Sbjct: 406 FDLFYGGKG-AGEETEDDLEGRMKSSVPPVTEKTPAFRDIHITNVTCRSVGRAMFFNGLP 464
Query: 389 EAPFANICLSNISLS 403
E P N+ + ++ ++
Sbjct: 465 EMPIRNVHVKDVVIT 479
>gi|284039631|ref|YP_003389561.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283818924|gb|ADB40762.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 551
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 192/440 (43%), Gaps = 78/440 (17%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
QPT R + +I FGA DG +LNT A AI + + KGG + VP+G WLTG
Sbjct: 38 QPTF--RRDTTNIIAFGAKPDGVSLNTQAINKAI---STCSQKGGGVVLVPAGIWLTGPI 92
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
L S++ L L+K A +L + + + + +V+ + R R +S ++G L +V +T
Sbjct: 93 VLKSNVNLHLKKAATLLFTTDKNQYALVEGVYEGKRAA-----RNQSPVSGTNLANVAIT 147
Query: 151 GDNGTIDGQGSVW------------WD---------------WFSSQSL----------- 172
G G +DG G VW W W+ S+
Sbjct: 148 GQ-GILDGNGDVWRAVHKSQLTESQWKEKVESGGVLKDDGKTWYPSEQFKKASTENRSML 206
Query: 173 --------------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISV 218
++ RP+LV + + V++ +TF N+PA+ +HP+ C ++ ++N++
Sbjct: 207 LAPGKTPQDFADMKDFLRPNLVVLTNCKKVLLEGVTFQNSPAWCLHPLMCQDLTLRNVTT 266
Query: 219 HAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVL 278
P + G+ +S N IE C + +G DAI +KSG DE G G PT + IR
Sbjct: 267 KNPEYAHNGDGMDIESCKNFLIEGCTLDVGDDAICIKSGKDEEGRKRGMPTENGIIRNNT 326
Query: 279 LQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYN 338
+ + G V GSEMSGG + V + G+ F++ +GRGG + I D + N
Sbjct: 327 VYNGHGGFVV-GSEMSGGARYLFVSNCTFMGTDKGLRFKSVRGRGGVVEHIYAKDIFMKN 385
Query: 339 IN-----------VAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGI 387
I V F G P + + P + F++I+ T G+
Sbjct: 386 IAQEAIFFDMYYFVKFATDGERDERPVVN---EGTPVFRNMRFENIVCTGAKKGIFVRGL 442
Query: 388 QEAPFANICLSNISLSINPG 407
E I ++N+ L G
Sbjct: 443 PEMAIQTIAMANMVLETEKG 462
>gi|408369543|ref|ZP_11167324.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407745289|gb|EKF56855.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 466
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 194/408 (47%), Gaps = 63/408 (15%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
SI ++GAVGDG T NT A ++AI ++ + GG ++ +P+GK+LTG +L S++ L LE
Sbjct: 50 SIMDYGAVGDGTTDNTQAIKDAI---QACVEAGGGKVVIPAGKFLTGPIHLKSNVNLHLE 106
Query: 102 KGA-VILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
K + VI ++ VV SY G+EL Y LI Y +++ VTG +GT +GQ
Sbjct: 107 KNSEVIFTKDKQAYLPVV--RTSY-EGVEL--MNYSPLIYAYQQKNIAVTG-SGTFNGQA 160
Query: 161 SV--WWDWFSSQSLNYS------------------------------------RPHLVEF 182
WW W ++ + RP E
Sbjct: 161 GKENWWPWSGAERYGHKKGDPHQRDSINLPRLRKMNEDATPVSERIFGEGHHLRPTFFEP 220
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
SENV++ +TF+NAP + +HP+ C+NV + + V + P G P+ S NV I +
Sbjct: 221 FESENVLIKGVTFINAPFWVMHPIKCTNVTVDGVKVIS--HGPNNDGCNPEYSKNVHITN 278
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQV 302
C+ G D I++KSG ++ G G + ++ + +++ G V GSE+S G+ NV V
Sbjct: 279 CVFDTGDDCIAIKSGRNDEGRRVGIVSENIVVENCIMKDGHG-GVVMGSEISAGVRNVYV 337
Query: 303 EKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP 359
+ DS N I +T RGG++ + + D ++ + AF N D+ +
Sbjct: 338 RNCKM-DSPNLDRAIRIKTNTLRGGFVENVFVKDIQVGQVKEAFLKI-NTYYAIYDNQEG 395
Query: 360 DALPAIDQITFKDIIGTNITIAGNF----TGIQEAPFANICLSNISLS 403
+ +P I I +++ + G + G +E P N+ N+++
Sbjct: 396 EHIPTIKNIHIENV---TVEDGGKYGILIQGREENPVKNVTFKNVTIK 440
>gi|399031128|ref|ZP_10731267.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070597|gb|EJL61889.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 524
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 179/382 (46%), Gaps = 48/382 (12%)
Query: 57 TLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWD 116
T A Q AI + + GG ++ P+G++LTG+ L S++T+ L+ GA++ S+N +D
Sbjct: 41 TEAIQGAI---EKASKNGGGTIFFPAGEYLTGALKLKSNITIHLDSGALLKFSEN---FD 94
Query: 117 VVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD---------- 165
D LP E + + + L + ++ + G G IDGQG WW+
Sbjct: 95 --DYLPYVEMRYEGIVMQSFSPLFYAKDVENITIKG-RGVIDGQGKAWWNEVYRIETAKG 151
Query: 166 ----------WFSSQS-------------LNYSRPHLVEFISSENVVVSNLTFLNAPAYN 202
W ++ RP + + +N+++ +TF N+P +
Sbjct: 152 PIPETKYQKMWTEQNKGIVYEPYYKRTIDKHFFRPSFFQAYNCKNILIEGVTFKNSPFWT 211
Query: 203 IHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYG 262
I+P +C NV + I+++ P SP T GI P S NV I +C I++G D I++KSG D G
Sbjct: 212 INPEFCDNVTVTGITINNP-HSPNTDGINPSSCTNVHISNCHISVGDDCITIKSGRDADG 270
Query: 263 IAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGR 322
YG+ T +V I + S G V GSEMSGGI + + + GI + +GR
Sbjct: 271 RKYGKATENVTITNCTMLSGHG-GVVIGSEMSGGIKKITISNCVFDGTDRGIRIKAARGR 329
Query: 323 GGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITI 380
GG + I + + + NI + D+ +P + P I ++ G N+
Sbjct: 330 GGVVEDIRVDNIVMKNIKEE-AIILDLFYDKDNPVEPVTERTPIFRNIHISNVTGGNVNK 388
Query: 381 AGNFTGIQEAPFANICLSNISL 402
AG GI E P NI SNI++
Sbjct: 389 AGFVRGIVEMPIQNITFSNINM 410
>gi|390933294|ref|YP_006390799.1| glycoside hydrolase family protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568795|gb|AFK85200.1| glycoside hydrolase family 28 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 518
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 196/395 (49%), Gaps = 35/395 (8%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
P +++ +FGAVGDGK ++T + Q+AI A G ++Y P G +LT L S+
Sbjct: 79 PETAYINVKDFGAVGDGKRIDTFSIQSAIM-----ACPDGGRVYFPEGVYLTYPIFLKSN 133
Query: 96 LTLFLEKGAVILGSQN-------PSHWDVVDPLPSYGRGIELPGR-RYKSLINGYMLRDV 147
+T+ L KGAV+LG++ P D + SY E + SLI G + +V
Sbjct: 134 ITIELGKGAVLLGAKEREMYPILPGEIDSQEFSNSYLGSWEGEANDMFASLITGISVENV 193
Query: 148 VVTGDNGTIDGQGS--VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHP 205
+ GD G IDG S WW + + + RP V +NV++ +T N+P++ IHP
Sbjct: 194 NIIGD-GVIDGNSSFDTWWYDAKVKRIAW-RPRTVYLNKCKNVLIEGITIRNSPSWTIHP 251
Query: 206 VYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAY 265
+ N+ N+++ P ++P T G+ P+S +V I ++G D I++KSG
Sbjct: 252 LMSQNLKFINLNIENPKDAPNTDGLDPESCKDVLIAGTRFSVGDDCIAIKSGKLSVSQKL 311
Query: 266 GRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG-- 323
P+ +++IR L++ G +V GSEMSGG+ NV VE + GI +T +GRG
Sbjct: 312 PMPSENLYIRNCLMEYGHG-AVVIGSEMSGGVKNVHVENCVFKKTDRGIRIKTRRGRGKT 370
Query: 324 GYIRQIVISDAEL------YNINVAFGACGNCGSHPDDDFDPDALPAIDQITF-KDIIGT 376
G I +I ++ ++ + IN +F C G + + + LP D+ + +I
Sbjct: 371 GIIDEIHAANIKMEGVLTPFTIN-SFYFCDADG-KTEYVWSKEKLPVDDRTPYVGNIYLK 428
Query: 377 NIT------IAGNFTGIQEAPFANICLSNISLSIN 405
NIT AG G+ E + + NI +S +
Sbjct: 429 NITCIDAHVAAGYMYGLPERKIERVDMENIYVSFD 463
>gi|261406667|ref|YP_003242908.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283130|gb|ACX65101.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 523
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 197/441 (44%), Gaps = 74/441 (16%)
Query: 28 CDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLT 87
C D P + H+V+IT++GAVGDG NT AF AI ++ A GG L +P G WLT
Sbjct: 10 CPDLPVIPE--HTVTITDYGAVGDGVYDNTQAFHQAI---EACAKAGGGTLVIPPGIWLT 64
Query: 88 GSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSY-GRGIELPGRRYKSLINGYMLRD 146
G L S + L GA ++ S+ + ++ + +Y GR + R +S ++G L D
Sbjct: 65 GPIKLQSRIELHASAGAFVMFSKFFEDYPIL--MSTYEGRQM----FRCQSPLDGEGLED 118
Query: 147 VVVTGDNGTIDGQGSVW------------WD--------------WFSSQSL-------- 172
V +TG G DG G W W+ W+ + +
Sbjct: 119 VAITG-GGIFDGSGEAWRPVKRGKLTESQWERLIQSGGVVDDQGLWWPTPAARDGQETLD 177
Query: 173 -----------------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
+Y RP+L+ + + +++S TF N+ A+ +HP + IQN
Sbjct: 178 RIEQTGSEEPQDYEPVRDYLRPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQN 237
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
I+V P + G+ DS V +E+ +G DAI LKSG +E G G+P+ + IR
Sbjct: 238 ITVRNPWYAQNGDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIR 297
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
+ G + GSEMSGGI +V V + GI F++ +GRGG + I+I
Sbjct: 298 NCTVYHGHG-GIVVGSEMSGGIKDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIR 356
Query: 336 LYNI-------NVAFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTG 386
+ +I N+ + G + ++ P + P I +DI+ + A G
Sbjct: 357 MRDIDGDAISFNLYYEGKAGSGEYQEEVMLPVTEETPVFRNIVIQDIVCSGAHTALLING 416
Query: 387 IQEAPFANICLSNISLSINPG 407
+ E P N+ + +++ G
Sbjct: 417 LPEMPVENLTVKRSAITSREG 437
>gi|448373202|ref|ZP_21557548.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
gi|445644701|gb|ELY97713.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
Length = 544
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 172/394 (43%), Gaps = 38/394 (9%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
P I EFGA NT A Q A L A GG + VP G ++TG +
Sbjct: 26 PDTGRYDIREFGAQSGSDDSNTEAIQTA---LDECAGTGGT-VSVPPGTYVTGPLRVGDR 81
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
TL LE GA + + ++ + S G + G L++G D V GT
Sbjct: 82 TTLQLEAGATL---RFVGDYEAFPTVKSRWEGWDQVGFHPCLLVDGA---DTVSITGRGT 135
Query: 156 IDGQGSVWWDW------------------FSSQSLNYS-------RPHLVEFISSENVVV 190
IDG G WW + F +Q+ RP L++ +ENV V
Sbjct: 136 IDGNGEYWWQFYGEPESTLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQVFDAENVTV 195
Query: 191 SNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHD 250
S +T N+P +N H VY NV I ++++ P ++P GI DSS V I D I G D
Sbjct: 196 SGVTLRNSPFWNTHVVYSENVTITDVNIENPADAPNGDGIDIDSSRYVRISDAYINAGDD 255
Query: 251 AISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
AI +KSG D G G P + + + +++ G V GSEMSG + +V V D+
Sbjct: 256 AICIKSGKDAEGREVGEPASQITVTNCTVEAGHG-GVVIGSEMSGDVRDVTVTNCTFTDT 314
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP--DALPAIDQI 368
GI +T +GRGG + + + I F G + D D +P + P + +
Sbjct: 315 DRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPEPIDEGTPLVRNV 374
Query: 369 TFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 402
+F +I N+ AG F G+ E F I ++ +
Sbjct: 375 SFSNITARNVETAGFFAGLPERYFEGISFRDVRI 408
>gi|418938241|ref|ZP_13491792.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
gi|375055025|gb|EHS51309.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
Length = 503
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 201/426 (47%), Gaps = 39/426 (9%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+ I +FGA + N A Q+AI + + G L +P+G W +G L S++TL +
Sbjct: 86 LDIRDFGASTESAD-NARAIQSAIAAIPA-----GGTLRLPAGSWSSGPVFLKSNMTLLI 139
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGR------GIELPGRRYKSLINGYMLRDVVVTGDNG 154
E+GAV+ + + V+ + GR G+ P + SLIN +++ +TG G
Sbjct: 140 EEGAVLADTGSRQGRKVLPARHADGRVLGTWEGVAEPC--FASLINAIDCQNLAITG-QG 196
Query: 155 TIDGQGSV--WWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVH 212
TIDG G WW W RP + +V +S +T N+P++ IHPV C +V
Sbjct: 197 TIDGGGDRGDWWTWPKETRDGARRPRTIFLSDCRHVTLSGITVRNSPSWTIHPVLCEHVL 256
Query: 213 IQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDV 272
+++ P SP T G+ P++S ++ + I++G D I++K+G + RPT V
Sbjct: 257 AVGLTIRNDPLSPNTDGLNPEASSDIRLIGLDISVGDDCIAIKAGKRDPRGGPDRPTRRV 316
Query: 273 HIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVIS 332
IR L+Q G +V GSEMS GI +V + + H + G+ +T +GRGG + I +S
Sbjct: 317 EIRNCLMQLGHG-AVVMGSEMSRGIHDVSISRCHFVGTDRGLRIKTRRGRGGAVSDIHLS 375
Query: 333 DAELYNIN--VAFGACGNCGSHPDDDF----DPDAL----PAIDQITFKDIIGTNI-TIA 381
+ + +A A C + ++ +P L P I IT +D++ + T A
Sbjct: 376 QCRMDGVATPIAVNAFYFCDADGRSEYVQSRNPLPLSIETPRISNITIRDVVVSGAETAA 435
Query: 382 GNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSS 441
F G+ E + + +S+ G+ H P+L ++ + +
Sbjct: 436 AVFYGLPECEIDAVSVDGLSIVYGEGAKPGLPEMACH----------LPQLLHAGIVAEN 485
Query: 442 TCFSLI 447
T FSL+
Sbjct: 486 TRFSLL 491
>gi|255692376|ref|ZP_05416051.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260621842|gb|EEX44713.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 513
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 185/389 (47%), Gaps = 60/389 (15%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
++ + +GG +Y P+G +LT + ++ S++TL++E GAV+ S D LP
Sbjct: 45 IEKASSEGGGTIYFPAGVYLTATIHMKSNITLYVESGAVLRFSDR-----FEDYLPFVK- 98
Query: 127 GIELPGRRYKSL---INGYMLRDVVVTGDNGTIDGQGSVWWDWF---------------- 167
I G +L I + ++ +TG GT+DG G WW W
Sbjct: 99 -IRWEGTVMNTLSPLIYAHDAENLTITG-RGTLDGNGFKWWSWEKETRELIKKNGGKLPA 156
Query: 168 ----------SSQSLNYS------------RPHLVEFISSENVVVSNLTFLNAPAYNIHP 205
+++ L S RP ++F NV++ N+ +N+P + I+P
Sbjct: 157 LNKLQRMWEEANEELEISDYYKPSLERRMFRPPFIQFYECNNVLIENVRIVNSPFWTINP 216
Query: 206 VYCSNVHIQNISVHAP---PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYG 262
+C NV + ++++ P P+ P T GI P S NV I DC I++G D I++KSG D G
Sbjct: 217 AFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDADG 276
Query: 263 IAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN-GIEFRTTKG 321
YG+ ++ I ++ S G V GSEMSGG+ V + ++D ++ GI ++++G
Sbjct: 277 RKYGKACENITITNCVMLSGHG-GVVIGSEMSGGVRRVTISNC-VFDGIDSGIRLKSSRG 334
Query: 322 RGGYIRQIVISDAELYNINV-AFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNI 378
RGG + ++ + + + NI AF + + +P + P I +I G++I
Sbjct: 335 RGGVVEELRVDNIVMKNIQRNAF--IFDLFYDKESKMEPVSERTPVFRNIHLSNITGSDI 392
Query: 379 TIAGNFTGIQEAPFANICLSNISLSINPG 407
G GI+E P + SNI++ G
Sbjct: 393 KQIGYIKGIEEMPVQGLSFSNINMKAEVG 421
>gi|346223719|ref|ZP_08844861.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 567
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 196/437 (44%), Gaps = 78/437 (17%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I++FGA+GDG T N+ AF +I A GG ++ V G WLTG + S++ L
Sbjct: 56 YVVNISDFGAIGDGITDNSEAFAASI---DDVAANGGGKVVVSRGIWLTGPIKMKSNINL 112
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+LE GAV+L S S +D + + G+E R S I+ + L ++ TG NG DG
Sbjct: 113 YLEDGAVVLFS---SDFDKYPLIETSFEGLET--YRCMSPIHAHNLENIAFTG-NGVFDG 166
Query: 159 QGSVW------------WD---------------WFSSQS-------------------- 171
G W W W+ ++
Sbjct: 167 SGDAWRPVKKSKMTASQWKNLVESGGVLSDDGKIWYPTEKSKAGDGKDNFNVPDLSSKEE 226
Query: 172 ----LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
++ RP +V + V++ TF N+PA+NIHP+ NV I+N+++ P S
Sbjct: 227 YEKVKDFLRPVMVSIKECKGVLLDGPTFQNSPAWNIHPLMSENVIIRNLTIRNPWYSQNG 286
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV 287
G+ +S NV I + +G DAI KSG +E G G PT +V ++ ++ G V
Sbjct: 287 DGLDLESCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGMPTENVIVKNNIVYHGHGGFV 346
Query: 288 AFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI---NVAFG 344
GSEMSGG+ NV V K + G+ F++T+GRGG + I ISD ++ +I + F
Sbjct: 347 V-GSEMSGGVRNVHVSKCTFMGTDTGLRFKSTRGRGGVVENIYISDIDMIDIPTEPIRFN 405
Query: 345 AC--GNC-------GSHPDDDFDP-----DALPAIDQITFKDIIGTNITIAGNFTGIQEA 390
GN S P ++ + P+ I K+I AG F G+ E
Sbjct: 406 LFYEGNAPVLDDGGNSVPSGEWSEPQPVTEETPSFRNIFMKNIRAHGFGNAGFFMGLPEM 465
Query: 391 PFANICLSNISLSINPG 407
N+ L N L G
Sbjct: 466 NLQNVHLENALLRGKEG 482
>gi|376338084|gb|AFB33587.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 95/137 (69%)
Query: 256 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 315
SGWDEYGI YGRP++++ IRRV+ Q+ + S +A GSEMSGGI V + + +++S G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 316 FRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 375
+T GRGGY+R + IS+ + N++V G G HPDD +DP+ALP I +ITFKDIIG
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPXIQRITFKDIIG 120
Query: 376 TNITIAGNFTGIQEAPF 392
I AG+ GIQ APF
Sbjct: 121 XEIKTAGSVEGIQNAPF 137
>gi|380693930|ref|ZP_09858789.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 528
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 200/434 (46%), Gaps = 79/434 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I++FGA GDG TLNT A +AI K +GG ++ +P G WLTG L S++ L
Sbjct: 47 YEVNISKFGAKGDGMTLNTKAINDAI---KEVNQRGGGKVIIPEGTWLTGPIELLSNVNL 103
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG------- 151
+ E+ A++L + + + ++ P+ G++ RR +S I+ ++ +TG
Sbjct: 104 YTERNALVLFTGDFEAYPII---PTSFEGLDT--RRCQSPISARDAENIAITGYGIFDGN 158
Query: 152 ----------------------DNGTIDGQGSVWW-------------DWFSSQSLN--- 173
G +D Q +W+ D+ + +N
Sbjct: 159 GDCWRPVKKEKLTASQWNKLVKSGGVLDAQERIWYPTAGSLKGAMACKDFNVPEGINTDE 218
Query: 174 -------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPY 226
+ RP L+ F+ S+ V++ +TF N+P++ +HP+ C ++ + NI V P S
Sbjct: 219 EWNEIRAWLRPVLLSFVKSKKVLLEGVTFKNSPSWCLHPLSCEDITVNNIQVINPWYSQN 278
Query: 227 TVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSS 286
+ +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 279 GDALDLESCKNALIINSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHGGF 338
Query: 287 VAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYNI 339
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 339 VV-GSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLF 397
Query: 340 NVAFGACGNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQE 389
++ +G G G ++D AI +T F+DI +NI G+ F G+ E
Sbjct: 398 DLFYGGKG-AGEESEEDLLSRMKTAIPPVTEETPAFRDIHISNIICRGSGRAMFFNGLPE 456
Query: 390 APFANICLSNISLS 403
P N+ + N+ ++
Sbjct: 457 MPIRNVTVKNVVMT 470
>gi|298383858|ref|ZP_06993419.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263462|gb|EFI06325.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 538
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 200/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I++FGA GDG TLNT A +AI K +GG ++ +P G WLTG L S++ L
Sbjct: 57 YEVNISKFGAKGDGMTLNTKAINDAI---KEVNQRGGGKVIIPEGTWLTGPIELLSNVNL 113
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ A+IL + + + ++ P+ G+E RR +S I+ ++ +TG G DG
Sbjct: 114 YTERNALILFTGDFEAYPII---PTSFEGLET--RRCQSPISARNAENIAITG-YGIFDG 167
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W+ W+ + + +N
Sbjct: 168 NGDCWRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGINTD 227
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ F+ S+ +++ +TF N+P++ +HP+ C + + NI V P S
Sbjct: 228 EEWNEIRAWLRPVLLSFVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYSQ 287
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
+ +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 288 NGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHGG 347
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 348 FVV-GSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLL 406
Query: 339 INVAFGACGNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G ++D AI +T F+DI +N+ G+ F G+
Sbjct: 407 FDLFYGGKG-AGEESEEDLLSRMKTAIPPVTEETPAFRDIHISNVICRGSGRAMFFNGLP 465
Query: 389 EAPFANICLSNISLS 403
E P N+ + N+ ++
Sbjct: 466 EMPIRNVTVKNVVMT 480
>gi|29349595|ref|NP_813098.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341505|gb|AAO79292.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 538
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 200/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I++FGA GDG TLNT A +AI K +GG ++ +P G WLTG L S++ L
Sbjct: 57 YEVNISKFGAKGDGMTLNTKAINDAI---KEVNQRGGGKVIIPEGTWLTGPIELLSNVNL 113
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ A+IL + + + ++ P+ G+E RR +S I+ ++ +TG G DG
Sbjct: 114 YTERNALILFTGDFEAYPII---PTSFEGLET--RRCQSPISARNAENIAITG-YGIFDG 167
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W+ W+ + + +N
Sbjct: 168 NGDCWRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGINTD 227
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ F+ S+ +++ +TF N+P++ +HP+ C + + NI V P S
Sbjct: 228 EEWNEIRAWLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYSQ 287
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
+ +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 288 NGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHGG 347
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 348 FVV-GSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLL 406
Query: 339 INVAFGACGNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G ++D AI +T F+DI +N+ G+ F G+
Sbjct: 407 FDLFYGGKG-AGEESEEDLLSRMKTAIPPVTEETPAFRDIHISNVICRGSGRAMFFNGLP 465
Query: 389 EAPFANICLSNISLS 403
E P N+ + N+ ++
Sbjct: 466 EMPIRNVTVKNVVMT 480
>gi|383120529|ref|ZP_09941257.1| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
gi|382985024|gb|EES68500.2| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
Length = 535
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 200/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I++FGA GDG TLNT A +AI K +GG ++ +P G WLTG L S++ L
Sbjct: 54 YEVNISKFGAKGDGMTLNTKAINDAI---KEVNQRGGGKVIIPEGTWLTGPIELLSNVNL 110
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ A+IL + + + ++ P+ G+E RR +S I+ ++ +TG G DG
Sbjct: 111 YTERNALILFTGDFEAYPII---PTSFEGLET--RRCQSPISARNAENIAITG-YGIFDG 164
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W+ W+ + + +N
Sbjct: 165 NGDCWRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGINTD 224
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ F+ S+ +++ +TF N+P++ +HP+ C + + NI V P S
Sbjct: 225 EEWNEIRAWLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYSQ 284
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
+ +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 285 NGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHGG 344
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 345 FVV-GSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLL 403
Query: 339 INVAFGACGNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G ++D AI +T F+DI +N+ G+ F G+
Sbjct: 404 FDLFYGGKG-AGEESEEDLLSRMKTAIPPVTEETPAFRDIHISNVICRGSGRAMFFNGLP 462
Query: 389 EAPFANICLSNISLS 403
E P N+ + N+ ++
Sbjct: 463 EMPIRNVTVKNVVMT 477
>gi|448360766|ref|ZP_21549393.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
gi|445652552|gb|ELZ05438.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
Length = 522
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 171/394 (43%), Gaps = 38/394 (9%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
P I EFGA NT A Q A L A GG + VP G ++TG +
Sbjct: 4 PDTGRYDIREFGAQSGSDDSNTEAIQTA---LDECAGTGGT-VSVPPGTYVTGPLRVGDR 59
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
TL LE GA + + ++ + S G + G L++G D V GT
Sbjct: 60 TTLHLEAGATL---RFVGDYEAFPTVKSRWEGWDQVGFHPCLLVDGA---DTVSITGRGT 113
Query: 156 IDGQGSVWWDW------------------FSSQSLNYS-------RPHLVEFISSENVVV 190
IDG G WW + F +Q+ RP L++ +ENV V
Sbjct: 114 IDGNGEYWWQFYGEPESTLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQVFDAENVTV 173
Query: 191 SNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHD 250
S +T N+P +N H VY NV I ++++ P +P GI DSS V I D I G D
Sbjct: 174 SGVTLRNSPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSSRYVRISDAYINAGDD 233
Query: 251 AISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
AI +KSG D G G P + + + +++ G V GSEMSG + +V V D+
Sbjct: 234 AICIKSGKDAEGREVGEPASQITVTNCTVEAGHG-GVVIGSEMSGDVRDVTVTNCTFTDT 292
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP--DALPAIDQI 368
GI +T +GRGG + + + I F G + D D +P + P + +
Sbjct: 293 DRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPEPIDEGTPLVRNV 352
Query: 369 TFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 402
+F +I N+ AG F G+ E F I ++ +
Sbjct: 353 SFSNITARNVETAGFFAGLPERYFEGISFRDVRI 386
>gi|430827435|ref|ZP_19445578.1| polygalacturonase [Enterococcus faecium E0164]
gi|430444043|gb|ELA53955.1| polygalacturonase [Enterococcus faecium E0164]
Length = 445
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 173/345 (50%), Gaps = 24/345 (6%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP+G++LTG+ L S++ L L GAV+ S +P + VV + R + +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ--SLNYSRPHLVEFISSENVVVS 191
Y S I + ++ VTG GT+DG G WW F ++ +L Y RP L+ F + + V
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ + +P++ I+P+ CSN N+++ P +SP T GI P+S NV I + I +G D
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNYHIDVGDDC 203
Query: 252 ISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++K+G ++ Y R ++ I + G V GSEMSG I N+ + ++
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CGNCGSHP---DDDFDP--D 360
GI ++ +GRGG + I +S+ + N+ F CG G P + P +
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKTAYPIDE 319
Query: 361 ALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSI 404
PA +I F +I N+ + F G+ E I NI +S+
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSM 364
>gi|408376656|ref|ZP_11174260.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
gi|407749346|gb|EKF60858.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
Length = 503
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 184/382 (48%), Gaps = 29/382 (7%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V I + GA D NT A Q+AI + + G L +P+G W +G L S +TL +
Sbjct: 86 VDIRDHGARPDSND-NTTAIQSAIAAVPA-----GGTLRLPAGSWTSGPLFLKSDMTLLI 139
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIE----LPGRRYKSLINGYMLRDVVVTGDNGTI 156
E+GAV+ S ++ GR + + + SL+N ++ + G G +
Sbjct: 140 EEGAVLQDSGTREGRRILSSRHPEGRVLGTWEGVAEACFASLLNAIDCDNLTICG-QGIV 198
Query: 157 DGQGSV--WWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
DG G WW W RP + ++ ++ +T N+P++ +HPV C +V
Sbjct: 199 DGGGDRGDWWTWPKETRDGARRPRTMFLSGCRHLTIAGITVRNSPSWTVHPVLCEDVLAV 258
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
+++ P+SP T G+ P+SS N+ + I++G D +++K+G + RPT +V I
Sbjct: 259 GLTIRNHPDSPNTDGLNPESSQNIRLVGLDISVGDDCVAIKAGKRDPRGGPDRPTRNVEI 318
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
R L+Q G +V GSEMS GIS+V + + H + + G+ +T +GRGG + +I + D
Sbjct: 319 RNCLMQRGHG-AVVMGSEMSQGISDVSISRCHFFGTDRGLRIKTRRGRGGTVSKISVHDC 377
Query: 335 ELYNIN--VAFGACGNCGSHPDDDF--DPDALPAIDQITFKDIIGTNI---------TIA 381
+ ++ +A A C + D+ ALP +T I G +I T A
Sbjct: 378 RMEDVATPIAVNAFYFCDADGRSDYVQSRTALPV--SLTTPKIEGIDIRNLEVSGAETAA 435
Query: 382 GNFTGIQEAPFANICLSNISLS 403
F G+ E+ + + +S++
Sbjct: 436 AVFYGLPESTIDAVSIDGMSIA 457
>gi|349858579|gb|AEQ20324.1| endopygalactorunase [uncultured bacterium CSLG10]
Length = 452
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 187/405 (46%), Gaps = 51/405 (12%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R ++GA GDG T NT+A Q+AI A K G + SG +LTGS L S
Sbjct: 21 RAAEFRANDYGAKGDGVTANTVAIQSAI----DAAAKTGGTIVFASGVYLTGSIFLKSGT 76
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
L ++KG I G Q+ + + V +P+ GIE+ + +LIN Y +V ++G G I
Sbjct: 77 RLRVDKGVEIRGMQDQAAYPV---MPTRIAGIEM--KWPAALINVYEQSNVKISG-QGVI 130
Query: 157 DGQGSVWWDWFSSQSLNYS-------------RPHLVEFISSENVVVSNLTFLNAPAYNI 203
DG G +WWD + +Y RP L++ S+NV + LT + + +
Sbjct: 131 DGDGKMWWDKYWQVRKDYEPKGLRWAADYDTPRPRLIQIYKSDNVELQGLTLRRSGFWTV 190
Query: 204 HPVYCSNVHIQNISVH--APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEY 261
H Y V + +++ P T GI DSS +V +++ I DAI +K+G D
Sbjct: 191 HICYSRKVTVDGVTIRNNIGGRGPSTDGIDVDSSSDVLVQNADIECNDDAIVMKAGRDAD 250
Query: 262 GIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIH-LYDSLNGIEFRTTK 320
G+ RPT +V I V ++ + + + FGSE SGGI +V+ +IH L S GI F++
Sbjct: 251 GLRVNRPTENVVIHDVTVRDGA-AGITFGSETSGGIRHVEAYRIHVLAPSPIGILFKSAA 309
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD---------PD----------- 360
RGG + I I D ++ N+ AF N +P+ + PD
Sbjct: 310 TRGGTVEDISIHDIDMRNVPTAFSV--NFNWNPNYSYAKIPQGLQNVPDYYKVMTQEVPR 367
Query: 361 --ALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
LP + I +I + T A + +AP + NI +
Sbjct: 368 AQGLPHLKNIRISNIKASGSTQAFSVGAYADAPLQGVTFRNIDIQ 412
>gi|237708712|ref|ZP_04539193.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265756017|ref|ZP_06090484.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513499|ref|ZP_08793020.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423242356|ref|ZP_17223465.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
gi|229437348|gb|EEO47425.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229457138|gb|EEO62859.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234095|gb|EEZ19696.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392639642|gb|EIY33458.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
Length = 539
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 202/444 (45%), Gaps = 83/444 (18%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGS 89
+QPT +SV+I +FGA DG TLNT A +AI + + KGG ++ +P G WLTG
Sbjct: 52 EQPTFPD--YSVNIIDFGAKPDGITLNTKAINDAIQQVNA---KGGGKVIIPEGLWLTGP 106
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
L S++ L+ EK A++L S + S + +++ + G+E RR +S I+ ++ +
Sbjct: 107 IELLSNVNLYTEKNALVLFSADHSLYPIIN---TSFEGLET--RRCQSPISARNAENIAI 161
Query: 150 TGDNGTIDGQGSVW------------WD---------------WFSSQSL---------- 172
TG +G DG G W W W+ S+
Sbjct: 162 TG-HGVFDGNGDTWRPTKKDKLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDN 220
Query: 173 -----------------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
++ RP L+ FI V++ TF N+P++ +HP+ C N+ I
Sbjct: 221 FNVPRGELTDSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINK 280
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
++V P S + +S + I + G D I +KSG DE G G P +V +
Sbjct: 281 VTVSNPWYSQNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVM 340
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
+ G V GSEMSGG++N+ V+ + G+ F++ +GRGG + I IS+
Sbjct: 341 NNTVLHGHGGFVV-GSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNIN 399
Query: 336 LYNI-------NVAFGACGNCGSHPDDDFDP--DALPAIDQIT--FKDIIGTNITIAGN- 383
+ NI N+ +G G G P+ D +P + + T F++I ++T G
Sbjct: 400 MINIPNEALIFNLYYGGKGR-GEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAG 458
Query: 384 ----FTGIQEAPFANICLSNISLS 403
F G+ E NI + NI +S
Sbjct: 459 RAVFFNGLPEMRIKNINMENIIVS 482
>gi|150004535|ref|YP_001299279.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|319643966|ref|ZP_07998541.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345518227|ref|ZP_08797681.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|423312455|ref|ZP_17290392.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
gi|149932959|gb|ABR39657.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|254835520|gb|EET15829.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317384490|gb|EFV65457.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392688143|gb|EIY81432.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
Length = 539
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 202/444 (45%), Gaps = 83/444 (18%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGS 89
+QPT +SV+I +FGA DG TLNT A +AI + + KGG ++ +P G WLTG
Sbjct: 52 EQPTFPD--YSVNIIDFGAKPDGITLNTKAINDAIQQVNA---KGGGKVIIPEGLWLTGP 106
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
L S++ L+ EK A++L S + S + +++ + G+E RR +S I+ ++ +
Sbjct: 107 IELLSNVNLYTEKNALVLFSADHSLYPIIN---TSFEGLET--RRCQSPISARNAENIAI 161
Query: 150 TGDNGTIDGQGSVW------------WD---------------WFSSQSL---------- 172
TG +G DG G W W W+ S+
Sbjct: 162 TG-HGVFDGNGDTWRPTKKDKLTEGQWKKLVASGGVVDADGRIWYPSEGALKGAILSKDN 220
Query: 173 -----------------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
++ RP L+ FI V++ TF N+P++ +HP+ C N+ I
Sbjct: 221 FNVPRGELTDSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINK 280
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
++V P S + +S + I + G D I +KSG DE G G P +V +
Sbjct: 281 VTVSNPWYSQNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVM 340
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
+ G V GSEMSGG++N+ V+ + G+ F++ +GRGG + I IS+
Sbjct: 341 NNTVLHGHGGFVV-GSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNIN 399
Query: 336 LYNI-------NVAFGACGNCGSHPDDDFDP--DALPAIDQIT--FKDIIGTNITIAGN- 383
+ NI N+ +G G G P+ D +P + + T F++I ++T G
Sbjct: 400 MINIPNEALIFNLYYGGKGR-GEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAG 458
Query: 384 ----FTGIQEAPFANICLSNISLS 403
F G+ E NI + NI +S
Sbjct: 459 RAVFFNGLPEMRIKNINMENIIVS 482
>gi|300772072|ref|ZP_07081942.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760375|gb|EFK57201.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 570
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 214/481 (44%), Gaps = 81/481 (16%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
+ ++SI FGA GDG +LNT A AI + KGG + +P+G W+TG L S++
Sbjct: 56 KADTISIVRFGAQGDGISLNTQAINRAI---AETSQKGGGVVLIPAGVWVTGPIELKSNI 112
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
L +++ A++L + + + +V+ + G P R +S I+G L ++ +TG G I
Sbjct: 113 NLHIQRDAILLFTDDFDQYKLVE---ANWEG--QPAWRNQSPISGSNLENIAITG-TGII 166
Query: 157 DGQGSVW------------WD---------------WF-SSQSLN--------------- 173
DG G W W W+ S+ SLN
Sbjct: 167 DGNGGAWRMVKKSKMTASQWKKLVESGGVLNEEKNIWYPSASSLNGSKTKNPSAVVPGKT 226
Query: 174 ---------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES 224
+ RP+L+ + + +++ +TF N+PA+N+HP+ C ++ ++N+ V P +
Sbjct: 227 AADYADVKDFFRPNLLVLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVMVRNPWYA 286
Query: 225 PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSG 284
GI +S NV +E+ +G D I +KSG DE G PT +V IR ++ + G
Sbjct: 287 QNGDGIDIESCKNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRNNVVYHAHG 346
Query: 285 SSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI----- 339
V GSEMSGG N+ V + G+ F+TT+GRGG + I I +++I
Sbjct: 347 GFV-IGSEMSGGARNIWVYDCSFIGTDIGLRFKTTRGRGGIVENIFIDRISMFDIPGEAI 405
Query: 340 --NVAFGA------CGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQE 389
++ + A G+ P +A P KD++ A F G+ E
Sbjct: 406 LADMYYEAKDPIPLIGDKQEAVKAVTLPVTEATPQFRNFKIKDVVVNGADKAIFFRGLPE 465
Query: 390 APFANICLSNISLSINPGSYNSWECSNIHGSSESVF-PEPCPELENSSSNSSSTCFSLIR 448
+ L NIS+ G E ++I + V PE P + NS + FS
Sbjct: 466 MNIKGMSLENISIKSKKG-IEIIESTDIELKNVKVITPETKPVVH--IDNSQNIKFSAFS 522
Query: 449 Y 449
Y
Sbjct: 523 Y 523
>gi|294778294|ref|ZP_06743720.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294447922|gb|EFG16496.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 539
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 202/444 (45%), Gaps = 83/444 (18%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGS 89
+QPT +SV+I +FGA DG TLNT A +AI + + KGG ++ +P G WLTG
Sbjct: 52 EQPTFPD--YSVNIIDFGAKPDGITLNTKAINDAIQQVNA---KGGGKVIIPEGLWLTGP 106
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
L S++ L+ EK A++L S + S + +++ + G+E RR +S I+ ++ +
Sbjct: 107 IELLSNVNLYTEKNALVLFSADHSLYPIIN---TSFEGLET--RRCQSPISARNAENIAI 161
Query: 150 TGDNGTIDGQGSVW------------WD---------------WFSSQSL---------- 172
TG +G DG G W W W+ S+
Sbjct: 162 TG-HGVFDGNGDTWRPTKKDKLTEGQWKKLVASGGVVDTDGRIWYPSEGALKGAILSKDN 220
Query: 173 -----------------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
++ RP L+ FI V++ TF N+P++ +HP+ C N+ I
Sbjct: 221 FNVPRGELTDSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINK 280
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
++V P S + +S + I + G D I +KSG DE G G P +V +
Sbjct: 281 VTVSNPWYSQNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVM 340
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
+ G V GSEMSGG++N+ V+ + G+ F++ +GRGG + I IS+
Sbjct: 341 NNTVLHGHGGFVV-GSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNIN 399
Query: 336 LYNI-------NVAFGACGNCGSHPDDDFDP--DALPAIDQIT--FKDIIGTNITIAGN- 383
+ NI N+ +G G G P+ D +P + + T F++I ++T G
Sbjct: 400 MINIPNEALIFNLYYGGKGR-GEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAG 458
Query: 384 ----FTGIQEAPFANICLSNISLS 403
F G+ E NI + NI +S
Sbjct: 459 RAVFFNGLPEMRIKNINMENIIVS 482
>gi|329957634|ref|ZP_08298109.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328522511|gb|EGF49620.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 533
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 199/430 (46%), Gaps = 79/430 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
++VSI +FGA GDG TLNT A +AI K+ KGG ++ +P G WLTG L S++ L
Sbjct: 56 YTVSILQFGAKGDGTTLNTKAINDAI---KAVNAKGGGKVVIPEGLWLTGPIELLSNVNL 112
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ EK A+++ + + + + + L + G L RR +S I+ ++ +TG +G DG
Sbjct: 113 YTEKNALVVFTDDFNAYPI---LETSFEG--LNTRRCQSPISARNTENIAITG-HGVFDG 166
Query: 159 QGSVW------------WD-------------WF-SSQSLN------------------- 173
G W WD W+ ++ SL
Sbjct: 167 SGDSWRPVKKSKLTASQWDALVKSGGVVDKSIWYPTAGSLKGALACKNFNNPEGIETDEE 226
Query: 174 ------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
+ RP L+ + S+ V++ +TF N+P++ +HP+ C ++ I + V P S
Sbjct: 227 WNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNG 286
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV 287
+ +S N I + I G DAI +KSG DE G G P +V ++ + G V
Sbjct: 287 DALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGHGGFV 346
Query: 288 AFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-------N 340
GSEMSGG+ N+ V + G+ F++T+GRGG + I I + + +I +
Sbjct: 347 V-GSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHMIDIPHEPLLFD 405
Query: 341 VAFGACGNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQEA 390
+ +G G ++D + Q+T F+DI +NI G+ F G+ E
Sbjct: 406 LFYGGKA-AGEETEEDLKGRMKTTVPQVTVETPSFRDIHISNIICKGSGRAMFFNGLPEM 464
Query: 391 PFANICLSNI 400
P N+ + ++
Sbjct: 465 PIKNVTVKDV 474
>gi|255532707|ref|YP_003093079.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345691|gb|ACU05017.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 542
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 187/398 (46%), Gaps = 44/398 (11%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++ ++GA D L T A + AI + + GG +Y P+GK+LTG+ +L S++T+F++
Sbjct: 42 NVLKYGARNDSSKLATQAIKKAI---DAASKAGGGTVYFPAGKYLTGAIHLKSNITIFID 98
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GA + S N D + + S G+++ + L Y ++ +TG G IDG G
Sbjct: 99 AGAELHFSDNFD--DYLPMVKSRYEGVDVTS--FSPLFYAYKAENIAITG-RGIIDGHGK 153
Query: 162 VWWDW--------------FSSQSLN---------------YSRPHLVEFISSENVVVSN 192
WWD+ + LN + RP ++ + +NV +
Sbjct: 154 KWWDFVEGYKADQPRSKWQYMFDDLNREILLPDDPKQMKRGFLRPPFIQTMYCKNVFIEG 213
Query: 193 LTFLNAPAYNIHPVYCSNVHIQNISVHAPPE-SPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
+T N+P + ++P +C NV I ++++ P +P T GI P+S +NV I +C I++G D
Sbjct: 214 ITIRNSPFWTVNPEFCENVTIHAVTINNPGSFAPNTDGINPESCNNVHISNCHISVGDDC 273
Query: 252 ISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL 311
I++KSG D G P + I + S G V GSEMSG + + + +
Sbjct: 274 ITIKSGKDAPGRKMAAPAQNYTITNCTMLSGHG-GVVIGSEMSGDVRKISISNCVFDGTD 332
Query: 312 NGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP--DALPAIDQIT 369
GI ++ +GRGG + +I + + + NI A + +P + P I
Sbjct: 333 RGIRIKSARGRGGIVEEIRVDNIIMKNIKQQ--AIVLDLQYAKTTLEPVSERTPRFRNIH 390
Query: 370 FKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPG 407
F +I G + A G++E P NI ++I++ G
Sbjct: 391 FSNITG-QVNEAAYLNGLEEMPIENISFNDINMEAKTG 427
>gi|357386032|ref|YP_004900756.1| Polygalacturonase [Pelagibacterium halotolerans B2]
gi|351594669|gb|AEQ53006.1| Polygalacturonase [Pelagibacterium halotolerans B2]
Length = 508
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 170/351 (48%), Gaps = 23/351 (6%)
Query: 75 GAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIE----L 130
GA LYVP G W TG L S L + + +GA I G + + +++ + GR +
Sbjct: 115 GATLYVPPGIWRTGPVFLKSGLFVHVPEGATIKGVADRGAYRMLEAFGADGRQQASWEGV 174
Query: 131 PGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WWDWFSSQSLNYSRPHLVEFISSENV 188
P R Y SL+ V + G G IDG G+ WW+W RP V +
Sbjct: 175 PARCYGSLLTAIDADGVTIAG-KGVIDGAGAEGDWWEWPKETREGARRPRTVFANRCTQL 233
Query: 189 VVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMG 248
+S LT N+P++ IHP+ C+ ++++ PP+SP T G+ P+SS ++ I ++G
Sbjct: 234 KMSGLTVRNSPSWTIHPLDCAGAVFADLAIENPPDSPNTDGLNPESSTDIEIVGVRFSVG 293
Query: 249 HDAISLKSG--WDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIH 306
D I++K+G W + + PT +V +R L++ G V GSEMSG +++V V
Sbjct: 294 DDCIAIKAGKIWPDGTVPA--PTRNVSVRHCLMERGHG-GVVIGSEMSGSVTDVTVAFCT 350
Query: 307 LYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP------- 359
+ D+ G+ +T +GRGG + +IV+SD + + + PD D
Sbjct: 351 MRDTDRGLRIKTRRGRGGAVARIVLSDCLMDGVKTPLSINSHYFCDPDGRSDAVQNRAPA 410
Query: 360 ---DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSINP 406
A P I I F+ N A + G+ EAP + + ++++S++ P
Sbjct: 411 PVSAATPKIGDIRFERTEVKNAHHALAYVLGLAEAPVSGLTIADVSVTYAP 461
>gi|325972835|ref|YP_004249026.1| polygalacturonase [Sphaerochaeta globus str. Buddy]
gi|324028073|gb|ADY14832.1| Polygalacturonase [Sphaerochaeta globus str. Buddy]
Length = 453
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 188/405 (46%), Gaps = 54/405 (13%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH-LTLFL 100
++ FGAVG+G+ + AF A+ L G L++ G +LTG ++ + L L L
Sbjct: 5 TLKSFGAVGNGQQNESEAFAKALAALSD-----GGVLHIEEGTYLTGPLHIQAKGLVLEL 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
++GAVI Q + ++ P+ S G+ LI D ++ G IDG G
Sbjct: 60 DRGAVI---QFIADENLYTPVYSRWEGVNCYCMHPCLLIEN---SDGLIVRGEGIIDGNG 113
Query: 161 SVWWDWFSSQS----------------LN----------------YSRPHLVEFISSENV 188
WWD + LN + RP LV+ ++S NV
Sbjct: 114 QWWWDTAHKKRTTQKGPVSAMENELSRLNPGYERQSGGGGGRQSQFLRPPLVQILNSNNV 173
Query: 189 VVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMG 248
+ LT N+P + +HP+Y +N+ ++ V P ++P T GI DS V I+ C++ +G
Sbjct: 174 KLEGLTLQNSPFWTLHPLYSTNLIFMDLKVLNPKDAPNTDGIDVDSCRFVTIKKCLVDVG 233
Query: 249 HDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY 308
D I+LKSG G+A +PTTD+ I ++S+ G +V GSE + GI +V+V
Sbjct: 234 DDGIALKSGSGPDGVATNKPTTDILIEECTVKSAHGGAV-IGSETAAGIRDVRVHDCLFD 292
Query: 309 DSLNGIEFRTTKGRGGYIRQIVISDAELYN--INVAFGACGNCGSHPDDDFD------PD 360
+ GI +T +GRGG I + S + N + CGS DF D
Sbjct: 293 GTDRGIRIKTRRGRGGAISNLHFSSVRMKNNLCPLTLNMYYRCGSLDPQDFSLEKLSITD 352
Query: 361 ALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLSI 404
P+I+ +T +D + T + F G+ E+P ++ + N + ++
Sbjct: 353 TTPSIEGVTIEDCYSEDFTSSAAFIVGLPESPIRDLVIRNCTFTV 397
>gi|317056840|ref|YP_004105307.1| glycoside hydrolase family protein [Ruminococcus albus 7]
gi|315449109|gb|ADU22673.1| glycoside hydrolase family 28 [Ruminococcus albus 7]
Length = 513
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 194/392 (49%), Gaps = 40/392 (10%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+VS+ +FGA GDG + +T++ Q AI L + +LY P G +LT L SH+TL
Sbjct: 76 AVSVRDFGAKGDGFSDDTVSIQTAINCLPN-----NGRLYFPEGVYLTAPIVLKSHITLD 130
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR-------------RYKSLINGYMLRD 146
+ + A +LG + S ++V+ P + I + G +++LI D
Sbjct: 131 ISEKAKLLGLPDQSAYNVI---PGTAKDI-ITGEDIHFGTWEGNAVPMHQALIFAEYAED 186
Query: 147 VVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
+ + G G IDG W + + N RP L+ F + + V +T NA ++ IHP
Sbjct: 187 IRIVG-RGVIDGNAEAGGWWENVKERNIPRPRLLFFNRCKLITVHGITVCNAASWQIHPY 245
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
+ S +H ++ + AP +SP T + P++ DNV I C ++G D I++KSG + G +
Sbjct: 246 FSSYLHFLDLDITAPKDSPNTDALDPEACDNVWISGCRFSVGDDCIAIKSGKIDIGRKFK 305
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--G 324
+P + +IR L+Q G +V GSEM+GG+ N+ VE+ + G+ +T +GRG
Sbjct: 306 QPAENHNIRNCLMQFGHG-AVTLGSEMAGGVRNLTVERCIFDHTDRGLRIKTRRGRGKDA 364
Query: 325 YIRQIVISDAELYN------INVAFGACGNCGSHPDDDFDPDALPAID------QITFKD 372
I ++ ++ IN+ + C + + + + + LP D + TF+D
Sbjct: 365 VIDGVLFEKMKMNGVLTPIVINMWYNCC-DPDRYSEYNTTREKLPVDDRTPYLGKFTFRD 423
Query: 373 IIGTNITIAGNFT-GIQEAPFANICLSNISLS 403
+ + ++A + G+ E P + I + +I +
Sbjct: 424 MECLDCSVAACYCDGLPEMPISEINVEDIHFT 455
>gi|304317802|ref|YP_003852947.1| glycoside hydrolase family protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779304|gb|ADL69863.1| glycoside hydrolase family 28 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 519
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 198/406 (48%), Gaps = 43/406 (10%)
Query: 30 DQPTLDPRPHS--VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLT 87
D+ L +P + +++ +FGA GDGK ++T + Q AI S D G +++ P G +LT
Sbjct: 71 DEIVLRTKPETAYINVRDFGANGDGKRIDTFSIQAAII---SCPD--GGRVFFPEGIYLT 125
Query: 88 GSFNLTSHLTLFLEKGAVILGSQN-------PSHWDVVDPLPSYGRGIELPGRR-YKSLI 139
L S++TL L KGAV+LG++ P D SY E + + SLI
Sbjct: 126 YPLFLKSNITLELGKGAVLLGAKEREMYPILPGEIDCKKIEDSYLGSWEGEAKEIFASLI 185
Query: 140 NGYMLRDVVVTGDNGTIDGQGS--VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLN 197
G + +V + G+ GTIDG S WW + + + RP + +NV++ +T N
Sbjct: 186 TGIGVENVNIIGE-GTIDGNSSFDTWWHDAKVKRIAW-RPRTIFLNKCKNVLIEGITIKN 243
Query: 198 APAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSG 257
+P++ IHP+ N+ N+++ P ++P T G+ P+S +V I ++G D I++KSG
Sbjct: 244 SPSWTIHPLLSQNLKFINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKSG 303
Query: 258 WDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFR 317
+ +++IR L++ G +V GSEMSGG+ NV V++ + GI +
Sbjct: 304 KLATSRKLPVSSENLYIRNCLMEYGHG-AVVIGSEMSGGVKNVHVDRCVFRKTDRGIRIK 362
Query: 318 TTKGRG--GYIRQIVISDAEL------YNINVAFGACGNCGSH---------PDDDFDPD 360
T +GRG G I +I S+ ++ + IN +F C G P D D
Sbjct: 363 TRRGRGSTGIIDEIHASNIKMDKVLTPFTIN-SFYFCDEDGKTEYVWSKEKLPVD----D 417
Query: 361 ALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSIN 405
P I I KDI + +A + G+ E + + NI + +
Sbjct: 418 RTPYIGNIYLKDITCNDTQVAAGYMYGLPERKIEKVTMENIYIKFD 463
>gi|361068131|gb|AEW08377.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|376338080|gb|AFB33585.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 95/137 (69%)
Query: 256 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 315
SGWDEYGI YGRP++++ IRRV+ Q+ + S +A GSEMSGGI V + + +++S G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 316 FRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 375
+T GRGGY+R + IS+ + N++V G G HPDD +DP+ALP I +ITFKDIIG
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 376 TNITIAGNFTGIQEAPF 392
I AG+ GIQ APF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|393781486|ref|ZP_10369681.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
gi|392676549|gb|EIY69981.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
Length = 501
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 178/395 (45%), Gaps = 59/395 (14%)
Query: 71 ADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIEL 130
A +GG +Y P+G +LT + + S++TL +E GA + S D LP I
Sbjct: 52 AAEGGGTIYFPAGTYLTATIRMKSNITLDIESGATLRFSDR-----FEDYLPFVK--IRW 104
Query: 131 PGRRYKSL---INGYMLRDVVVTGDNGTIDGQGSVWWDWF-------------------- 167
G +L I ++ +TG GT+DG G WW W
Sbjct: 105 EGTVMNTLSPLIYADNADNLTITG-RGTLDGNGFKWWAWEVDTRRLIKENGGKLPSLNKL 163
Query: 168 ------SSQSLNYS------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
+++ L S RP ++F N+V+ N+ +N+P + I+P +C
Sbjct: 164 QQMWVDANKDLEISDYYKPSLERRMFRPPFIQFFECNNIVIENVKIINSPFWTINPAFCD 223
Query: 210 NVHIQNISVHAP---PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
N+ + ++++ P P+ P T GI P S NV I DC I++G D I++KSG D G YG
Sbjct: 224 NITVHGVTINNPSKNPKGPNTDGINPTSCSNVRISDCFISVGDDCITIKSGRDADGRKYG 283
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
+P ++ I ++ S G V GSEMSGG+ V + + GI + ++GRGG +
Sbjct: 284 KPCQNLTITNCIMLSGHG-GVVIGSEMSGGVKRVAISNCVFDGTDAGIRLKASRGRGGVV 342
Query: 327 RQIVISDAELYNIN---VAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGN 383
I + + + NI F + S P+ + P I +I G+++ G
Sbjct: 343 EDIRVDNIVMKNIGRNAFIFDLFYDKLSKPEP--VSERTPVFRNIHLSNITGSDVKQIGY 400
Query: 384 FTGIQEAPFANICLSNISLSINPGSYNSWECSNIH 418
GI+E P + SNI++ G +N +NI
Sbjct: 401 IKGIEEMPINELSFSNINMEAEKG-FNVETATNIR 434
>gi|423228811|ref|ZP_17215217.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
gi|423247623|ref|ZP_17228671.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392631516|gb|EIY25487.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392635550|gb|EIY29449.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
Length = 539
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 202/444 (45%), Gaps = 83/444 (18%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGS 89
+QPT +SV+I +FGA DG TLNT A +AI + + KGG ++ +P G WLTG
Sbjct: 52 EQPTFPD--YSVNIIDFGAKPDGITLNTKAINDAIQQVNA---KGGGKVIIPEGLWLTGP 106
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
L S++ L+ EK A++L S + S + +++ + G+E RR +S I+ ++ +
Sbjct: 107 IELLSNVNLYTEKNALVLFSADHSLYPIIN---TSFEGLET--RRCQSPISARDAENIAI 161
Query: 150 TGDNGTIDGQGSVW------------WD---------------WFSSQSL---------- 172
TG +G DG G W W W+ S+
Sbjct: 162 TG-HGVFDGNGDTWRPTKKDKLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDN 220
Query: 173 -----------------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
++ RP L+ FI V++ TF N+P++ +HP+ C N+ I
Sbjct: 221 FNVPRGELTDSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINK 280
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
++V P S + +S + I + G D I +KSG DE G G P +V +
Sbjct: 281 VTVSNPWYSQNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVM 340
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
+ G V GSEMSGG++N+ V+ + G+ F++ +GRGG + I IS+
Sbjct: 341 NNTVLHGHGGFVV-GSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNIN 399
Query: 336 LYNI-------NVAFGACGNCGSHPDDDFDP--DALPAIDQIT--FKDIIGTNITIAGN- 383
+ NI N+ +G G G P+ D +P + + T F++I ++T G
Sbjct: 400 MINIPNEALIFNLYYGGKGR-GEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAG 458
Query: 384 ----FTGIQEAPFANICLSNISLS 403
F G+ E NI + NI +S
Sbjct: 459 RAVFFNGLPEMRIKNINMENIIVS 482
>gi|317475267|ref|ZP_07934533.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
gi|316908521|gb|EFV30209.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
Length = 533
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 205/442 (46%), Gaps = 81/442 (18%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGS 89
+QP+ ++V+I +FGA GDG TLNT A +AI K+ KGG ++ +P G WLTG
Sbjct: 49 EQPSFPD--YTVNILQFGAKGDGITLNTKAINDAI---KAVNAKGGGKVVIPEGLWLTGP 103
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
L S++ L+ EK A+I+ S + + + + L + G L RR +S I+ ++ +
Sbjct: 104 IELLSNVNLYTEKNALIVFSDDFNAYPI---LETSFEG--LNTRRCQSPISARNAENIAI 158
Query: 150 TGDNGTIDGQGSVW------------WD-------------WF-SSQSLN---------- 173
TG G DG G W WD W+ ++ SL
Sbjct: 159 TG-YGVFDGSGDSWRPVKKGKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKEFNN 217
Query: 174 ---------------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISV 218
+ RP L+ + S+ V++ +TF N+P++ +HP+ C ++ I + V
Sbjct: 218 PEGIETEEEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKV 277
Query: 219 HAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVL 278
P S + +S N I + I G DAI +KSG D+ G G P +V ++
Sbjct: 278 FNPWYSQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKNNT 337
Query: 279 LQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYN 338
+ G V GSEMSGG+ N+ V + G+ F++T+GRGG + I I + + +
Sbjct: 338 VLHGHGGFVV-GSEMSGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHMID 396
Query: 339 I-------NVAFGACGNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN--- 383
I ++ +G G ++D +I ++T F+DI +NI G+
Sbjct: 397 IPHEPLLFDLFYGGKA-AGEETEEDLKSRMKASIPEVTVETPSFRDIHISNIICKGSGRA 455
Query: 384 --FTGIQEAPFANICLSNISLS 403
F G+ E P N+ + N+ +S
Sbjct: 456 MFFNGLPEMPIRNVTVKNVIIS 477
>gi|356565569|ref|XP_003551012.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 346
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 122/220 (55%), Gaps = 44/220 (20%)
Query: 22 EVSDG-QCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYV 80
V++G C + P + R HS +T+FG VGDGKT NT AFQ AI L +A GGA L V
Sbjct: 151 RVANGLDCFEYPAISCRKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYASDGGALLVV 210
Query: 81 PSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLIN 140
P GKWLTGSFNLTSH TLFL+K A ILGSQ+ S W + LPSYGRG + P
Sbjct: 211 PPGKWLTGSFNLTSHFTLFLQKEATILGSQDESEWPTLPVLPSYGRGRDAP--------- 261
Query: 141 GYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
DG P+++E + +++ +SNLT +N+ +
Sbjct: 262 ----------------DG------------------PYMIEIMFFDHIQISNLTLINSLS 287
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCI 240
+HP+Y S++ IQ +++ AP +SP T GI + S +V I
Sbjct: 288 LFVHPIYSSDIIIQGLTILAPIDSPNTDGIDLEDSVSVLI 327
>gi|336415217|ref|ZP_08595558.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
gi|335941250|gb|EGN03108.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
Length = 513
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 182/388 (46%), Gaps = 58/388 (14%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
++ + +GG +Y P+G +LT + ++ S++TL++E GAV+ S D LP
Sbjct: 45 IEKASSEGGGTIYFPAGVYLTATIHMKSNITLYVESGAVLRFSDR-----FEDYLPFVK- 98
Query: 127 GIELPGRRYKSL---INGYMLRDVVVTGDNGTIDGQGSVWWDWF---------------- 167
I G +L I + ++ +TG GT++G G WW W
Sbjct: 99 -IRWEGTVMNTLSPLIYAHDAENLTITG-RGTLNGNGFKWWSWEKETRELIKKNGGKLPA 156
Query: 168 ----------SSQSLNYS------------RPHLVEFISSENVVVSNLTFLNAPAYNIHP 205
+++ L S RP ++F NV++ N+ +N+P + I+P
Sbjct: 157 LNKLQRMWEEANEDLEISDYYKPSLERRMFRPPFIQFYECNNVLIENVKIVNSPFWTINP 216
Query: 206 VYCSNVHIQNISVHAP---PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYG 262
+C NV + ++++ P P+ P T GI P S NV I DC I++G D I++KSG D G
Sbjct: 217 AFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDADG 276
Query: 263 IAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGR 322
YG+ ++ I ++ S G V GSEMSGG+ V + + +GI ++++GR
Sbjct: 277 RKYGKACENITITNCVMLSGHG-GVVIGSEMSGGVRRVTISNCVFDGTDSGIRLKSSRGR 335
Query: 323 GGYIRQIVISDAELYNINV-AFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNIT 379
GG + ++ + + + NI AF + + +P + P I +I G++I
Sbjct: 336 GGVVEELRVDNIVMKNIQRNAF--IFDLFYDKESKVEPVSERTPVFRNIHLSNITGSDIK 393
Query: 380 IAGNFTGIQEAPFANICLSNISLSINPG 407
G GI+E P + SNI++ G
Sbjct: 394 QIGYIKGIEEMPVQGLSFSNINMKAEVG 421
>gi|160885582|ref|ZP_02066585.1| hypothetical protein BACOVA_03584 [Bacteroides ovatus ATCC 8483]
gi|299147452|ref|ZP_07040517.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|423290253|ref|ZP_17269102.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|423294451|ref|ZP_17272578.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
gi|156109204|gb|EDO10949.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|298514730|gb|EFI38614.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|392665640|gb|EIY59163.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|392675642|gb|EIY69083.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
Length = 513
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 182/388 (46%), Gaps = 58/388 (14%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
++ + +GG +Y P+G +LT + ++ S++TL++E GAV+ S D LP
Sbjct: 45 IEKASSEGGGTIYFPAGVYLTATIHMKSNITLYVESGAVLRFSDR-----FEDYLPFVK- 98
Query: 127 GIELPGRRYKSL---INGYMLRDVVVTGDNGTIDGQGSVWWDWF---------------- 167
I G +L I + ++ +TG GT++G G WW W
Sbjct: 99 -IRWEGTVMNTLSPLIYAHDAENLTITG-RGTLNGNGFKWWSWEKETRELIKKNGGKLPA 156
Query: 168 ----------SSQSLNYS------------RPHLVEFISSENVVVSNLTFLNAPAYNIHP 205
+++ L S RP ++F NV++ N+ +N+P + I+P
Sbjct: 157 LNKLQRMWEEANEDLEISDYYKPSLERRMFRPPFIQFYECNNVLIENVKIVNSPFWTINP 216
Query: 206 VYCSNVHIQNISVHAP---PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYG 262
+C NV + ++++ P P+ P T GI P S NV I DC I++G D I++KSG D G
Sbjct: 217 AFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDADG 276
Query: 263 IAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGR 322
YG+ ++ I ++ S G V GSEMSGG+ V + + +GI ++++GR
Sbjct: 277 RKYGKACENITITNCVMLSGHG-GVVIGSEMSGGVRRVTISNCVFDGTDSGIRLKSSRGR 335
Query: 323 GGYIRQIVISDAELYNINV-AFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNIT 379
GG + ++ + + + NI AF + + +P + P I +I G++I
Sbjct: 336 GGVVEELRVDNIVMKNIQRNAF--IFDLFYDKESKVEPVSERTPVFRNIHLSNITGSDIK 393
Query: 380 IAGNFTGIQEAPFANICLSNISLSINPG 407
G GI+E P + SNI++ G
Sbjct: 394 QIGYIKGIEEMPVQGLSFSNINMKAEVG 421
>gi|423215151|ref|ZP_17201679.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692414|gb|EIY85652.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 513
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 181/388 (46%), Gaps = 58/388 (14%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
++ + +GG +Y P+G +LT + + +++TL++E GAV+ S D LP
Sbjct: 45 IEKASSEGGGTIYFPAGVYLTATIYMKNNITLYVESGAVLRFSDR-----FEDYLPFVK- 98
Query: 127 GIELPGRRYKSL---INGYMLRDVVVTGDNGTIDGQGSVWWDWF---------------- 167
I G +L I + ++ +TG GT+DG G WW W
Sbjct: 99 -IRWEGTVMNTLSPLIYAHDAENLTITG-RGTLDGNGFKWWSWEKETRELIKKNGGKLPA 156
Query: 168 ----------SSQSLNYS------------RPHLVEFISSENVVVSNLTFLNAPAYNIHP 205
+++ L S RP ++F NV++ N+ +N+P + I+P
Sbjct: 157 LNKLQRMWEEANEELEISDYYKPSLERRMFRPPFIQFYECNNVLIENVKIVNSPFWTINP 216
Query: 206 VYCSNVHIQNISVHAP---PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYG 262
+C NV + ++++ P P+ P T GI P S NV I DC I++G D I++KSG D G
Sbjct: 217 AFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDADG 276
Query: 263 IAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGR 322
YG+ ++ I ++ S G V GSEMSGG+ V + + +GI ++++GR
Sbjct: 277 RKYGKACENITITNCVMLSGHG-GVVIGSEMSGGVRRVTISNCVFDGTDSGIRLKSSRGR 335
Query: 323 GGYIRQIVISDAELYNINV-AFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNIT 379
GG + ++ + + + NI AF + + +P + P I +I G++I
Sbjct: 336 GGVVEELRVDNIVMKNIQRNAF--IFDLFYDKESKVEPVSERTPVFRNIHLSNITGSDIK 393
Query: 380 IAGNFTGIQEAPFANICLSNISLSINPG 407
G GI+E P + SNI++ G
Sbjct: 394 QIGYIKGIEEMPVQGLSFSNINMKAEVG 421
>gi|317474867|ref|ZP_07934137.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909005|gb|EFV30689.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 445
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 178/407 (43%), Gaps = 60/407 (14%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V + E G NT N I L GG L+ PSG +LT S ++ S++TL
Sbjct: 21 ERVDMREAGVDNQEALKNTEIINNTINRLNK---AGGGTLFFPSGDYLTASIHMKSNITL 77
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LE GA + S N D + + G+ + + ++ LI ++ + G+ G +DG
Sbjct: 78 ELEAGATLRFSDNFD--DYMPFVEMRHEGVMM--KSFQPLIYATDAENITIKGE-GKLDG 132
Query: 159 QGSVWW----------------------------------------DWFSSQSLNYSRPH 178
QG WW DW S+ + RP
Sbjct: 133 QGKAWWKEFFRVLIDLRDNGKRDINKYQPLFEQANDMKTLYAETNVDWHSTLDRRFLRPP 192
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
++ + NV + +T +N+P + ++P +C NV ++ ++++ P SP T GI P+S NV
Sbjct: 193 FIQLLRCRNVRIEGITIVNSPFWTVNPNFCDNVTVKGVTINNVP-SPNTDGINPESCSNV 251
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
I DC I++G D I++KSG D GRP ++ I + S G V GSEMSGG+
Sbjct: 252 HISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLSGHG-GVVIGSEMSGGVK 310
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD 358
V + + GI ++T+GRGG + I +S+ + +I S +
Sbjct: 311 KVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSDIKREAVVLNLKYSQMKMEKK 370
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFT-----GIQEAPFANICLSNI 400
+ P F++I T +T+ G T G+ EAP I +I
Sbjct: 371 SERTPV-----FRNIFVTGLTVRGTQTPLKVDGLPEAPIEGIVFRDI 412
>gi|423214932|ref|ZP_17201460.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692195|gb|EIY85433.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
Length = 472
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 196/419 (46%), Gaps = 40/419 (9%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW-LTGSFNLTSHLT 97
+ +I +FGAV DG+ AF AI +D+GG ++ VP+G + + G S++
Sbjct: 55 KTYNIADFGAVADGRMPCKGAFDKAI---TQCSDQGGGRIIVPAGTYYMNGPLVFKSNVN 111
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
+ LE GA++ S N D + + + G EL Y LI Y ++++ +TG GTI+
Sbjct: 112 IHLEDGAILNFSSNQE--DYLPAVITRWEGTEL--FNYSPLIYAYHVQNIALTGK-GTIN 166
Query: 158 GQGSVWWD-WFSSQSLNYS-----------------------RPHLVEFISSENVVVSNL 193
G GS + W +Q+++ RP +E NV + +
Sbjct: 167 GNGSKKFSAWADNQNIDKEILRRMGRENLPIYRRIFGEGFRLRPGFIEPYGCVNVRIEGI 226
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
T ++P + IHP++C+NV +++++V + + G P+S NV IE C + G DAI+
Sbjct: 227 TIKDSPFWVIHPIFCNNVIVRDVTVDS--HNRNNDGCDPESCSNVLIEGCTFSTGDDAIA 284
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG 313
+KSG D G+PT +V IR S + V GSE+SGG+ NV +E I + S N
Sbjct: 285 IKSGRDNDAWRIGQPTENVVIRNCTFWSKI-NGVCIGSEISGGVRNVFIENISILKSSNA 343
Query: 314 IEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDI 373
I F++ RGGYI I + + + ++ A F P ++IT +++
Sbjct: 344 IYFKSNLDRGGYIENIYVRNIQADSVRTALVRVEPNYKGERSGFHPTLF---NKITVENV 400
Query: 374 I-GTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPE 431
G A + G E P NI L NI++ Y NI + V E PE
Sbjct: 401 TCGQTNECAISMAGFPELPIRNITLKNITVDKAVSDYRLEHGENIIFENVRVNGEKLPE 459
>gi|295102197|emb|CBK99742.1| Endopolygalacturonase [Faecalibacterium prausnitzii L2-6]
Length = 518
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 192/390 (49%), Gaps = 32/390 (8%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V + +G V DG+T NT Q A+ S +GG +YVP+G++ T S + S TL+L
Sbjct: 82 VDASRYGLVADGETDNTGRLQAAL----STCPRGGT-VYVPAGRYRTASLFMKSCTTLYL 136
Query: 101 EKGAVILGSQNPSHWDVV-DPLPSYGRGIEL--------PGRRYKSLINGYMLRDVVVTG 151
EKGAV+LG + +H+ ++ +PS E P + L+N + DVVVTG
Sbjct: 137 EKGAVLLGDNDRTHYPILPGVIPSENEVDEYYLTGWEGNPLNSFAGLLNITQVHDVVVTG 196
Query: 152 DNGTID--GQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
+ GT+D Q WW + + + RP V + SEN+ + +T N+ ++ IHP++
Sbjct: 197 E-GTLDCDAQNGDWWIDPKVKRIAW-RPRAVAMVDSENICLHGITVQNSYSWTIHPIFVK 254
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
++ + + +++ P +P T GI P+S + I I +G D I++K+ G+ +
Sbjct: 255 HLDLLSFNINNPYNAPNTDGIDPESCEYTRIIGVNIHVGDDCIAMKASKVFLGMKLKKSC 314
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIR 327
IR LL G + GSEMSGG+ ++ V + + + G+ +T +GRG I
Sbjct: 315 EHTVIRNCLLDKGHG-GIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVID 373
Query: 328 QIVISDAELYNINVAFGA-----CGNCGSHP----DDDFDPDAL-PAIDQITFKDIIGTN 377
+V + E+ + F C G P + D P + +T +DI+ T+
Sbjct: 374 GLVFRNVEMRGVKAPFVINMFYFCDPDGHSPYVQCREALPVDEYTPKLGTLTMEDIVATD 433
Query: 378 ITIAG-NFTGIQEAPFANICLSNISLSINP 406
AG F G+ E P + + N++++ +P
Sbjct: 434 AQFAGCYFDGLPEQPIEGVSMKNVTITFDP 463
>gi|212693553|ref|ZP_03301681.1| hypothetical protein BACDOR_03070 [Bacteroides dorei DSM 17855]
gi|212663806|gb|EEB24380.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 539
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 202/444 (45%), Gaps = 83/444 (18%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGS 89
+QPT +SV+I +FGA DG TLNT A +AI + + KGG ++ +P G WLTG
Sbjct: 52 EQPTFPD--YSVNIIDFGAKPDGITLNTKAINDAIQQVNA---KGGGKVIIPEGLWLTGP 106
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
L S++ L+ EK +++L S + S + +++ + G+E RR +S I+ ++ +
Sbjct: 107 IELLSNVNLYTEKNSLVLFSADHSLYPIIN---TSFEGLET--RRCQSPISARNAENIAI 161
Query: 150 TGDNGTIDGQGSVW------------WD---------------WFSSQSL---------- 172
TG +G DG G W W W+ S+
Sbjct: 162 TG-HGVFDGNGDTWRPTKKDKLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDN 220
Query: 173 -----------------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
++ RP L+ FI V++ TF N+P++ +HP+ C N+ I
Sbjct: 221 FNVPRGELTDSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINK 280
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
++V P S + +S + I + G D I +KSG DE G G P +V +
Sbjct: 281 VTVSNPWYSQNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVM 340
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
+ G V GSEMSGG++N+ V+ + G+ F++ +GRGG + I IS+
Sbjct: 341 NNTVLHGHGGFVV-GSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNIN 399
Query: 336 LYNI-------NVAFGACGNCGSHPDDDFDP--DALPAIDQIT--FKDIIGTNITIAGN- 383
+ NI N+ +G G G P+ D +P + + T F++I ++T G
Sbjct: 400 MINIPNEALIFNLYYGGKGR-GEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAG 458
Query: 384 ----FTGIQEAPFANICLSNISLS 403
F G+ E NI + NI +S
Sbjct: 459 RAVFFNGLPEMRIKNINMENIIVS 482
>gi|146301992|ref|YP_001196583.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156410|gb|ABQ07264.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 475
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 197/420 (46%), Gaps = 68/420 (16%)
Query: 32 PTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFN 91
P + + + +I +FGAV DGKTLNT AF+ AI ++ + GG ++ VP+GK+LTG+ +
Sbjct: 49 PKTNFQDKTYNINDFGAVADGKTLNTAAFEKAI---QTCTENGGGKVLVPNGKYLTGAIH 105
Query: 92 LTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG 151
L +++ L LE A IL S NP + +V + G EL Y LI +V +TG
Sbjct: 106 LENNVNLHLEDKAEILFSLNPKDYPIVH---TSWEGTEL--MNYSPLIYAKNKTNVAITG 160
Query: 152 DNGTIDGQG--SVWWDWFSSQSL------------------------------------N 173
G ++GQ + WW W ++
Sbjct: 161 K-GILNGQADSTNWWIWSGAKMYGWKKGIPSQNDPTNREVLVDMAEKDIPVEQRIFGEGR 219
Query: 174 YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPD 233
Y RP+ +EF V+V ++T +N+P + +HP+ +N+ I ++V++ P G P+
Sbjct: 220 YLRPNFIEFFECNTVLVKDITVINSPFWILHPIKTNNMIIDGVTVNS--HGPNNDGCDPE 277
Query: 234 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 293
S N+ I++C G D I++K+G D G P+ ++ ++ + G V GSE+
Sbjct: 278 YSQNIVIKNCTFNTGDDCIAIKAGRDADGRRVAIPSKNIIVQNCKMIDGHG-GVVIGSEI 336
Query: 294 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAELYNIN---VAFGACG 347
S G++NV VE + DS N I +T RGG I + + + E+ + +
Sbjct: 337 SAGVNNVFVENC-VMDSPNLDRAIRIKTNSRRGGIIENVFVRNLEVGTVKECVLKLNMFY 395
Query: 348 NCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFT----GIQEAPFANICLSNISLS 403
N +F +P I I +++ N+ G ++ G +E+P NI L N+ +
Sbjct: 396 NVYGSQTGNF----IPVIRNINLENV---NVKNGGKYSIWAEGYKESPVENITLKNVKIQ 448
>gi|227536102|ref|ZP_03966151.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
gi|227243999|gb|EEI94014.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
Length = 577
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 214/481 (44%), Gaps = 81/481 (16%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
+ ++SI FGA GDG +LNT + AI + KGG + +P+G W+TG L S++
Sbjct: 63 KADTISIVRFGAQGDGISLNTQSINRAI---AETSQKGGGVVLIPAGVWVTGPIELKSNI 119
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
L +++ A++L + + + +V+ + G P R +S I+G L ++ +TG G I
Sbjct: 120 NLHIQRDAILLFTDDFDQYKLVE---ANWEG--QPAWRNQSPISGSNLENIAITG-TGII 173
Query: 157 DGQGSVW------------WD---------------WF-SSQSLN--------------- 173
DG G W W W+ S+ SLN
Sbjct: 174 DGNGGAWRMVKKSKMTASQWKKLIESGGVLNDEKNIWYPSASSLNGSKTKNPSAVVPGKT 233
Query: 174 ---------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES 224
+ RP+L+ + + +++ +TF N+PA+N+HP+ C ++ ++N+ V P +
Sbjct: 234 AADYADVKDFFRPNLLVLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVMVRNPWYA 293
Query: 225 PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSG 284
GI +S NV +E+ +G D I +KSG DE G PT +V IR ++ + G
Sbjct: 294 QNGDGIDIESCKNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRNNVVYHAHG 353
Query: 285 SSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI----- 339
V GSEMSGG N+ V + G+ F+TT+GRGG + I I +++I
Sbjct: 354 GFV-IGSEMSGGARNIWVYDCSFIGTDIGLRFKTTRGRGGVVENIFIDRISMFDIPGEAI 412
Query: 340 --NVAFGA------CGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQE 389
++ + A G+ P +A P KD++ A F G+ E
Sbjct: 413 LVDMYYEAKDPIPLIGDKQEAVKAVTLPVTEATPQFRNFKIKDVVVNGADKAIFFRGLPE 472
Query: 390 APFANICLSNISLSINPGSYNSWECSNIHGSSESVF-PEPCPELENSSSNSSSTCFSLIR 448
+ L NIS+ G E ++I + V PE P + NS + FS
Sbjct: 473 MNIKGMSLENISIKSKKG-IEIIESTDIELKNVKVITPETKPVVH--IDNSQNIKFSTFS 529
Query: 449 Y 449
Y
Sbjct: 530 Y 530
>gi|399032129|ref|ZP_10731768.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069540|gb|EJL60890.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 210/462 (45%), Gaps = 89/462 (19%)
Query: 3 MPVALLLLLALCSAILINGEVS--------DGQCDDQPTLDPRPHSVSITEFGAVGDGKT 54
+PV +LL + S N ++S D P S +I ++GAV DG T
Sbjct: 15 IPVYILLFFSCSSK---NADISGDSPWKKMDLIVKSIPQTKFSDKSYNIKDYGAVADGTT 71
Query: 55 LNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSH 114
LNT AF+ AI K A+ GG ++ VP+GK+LTG+ +L S++ L L+ A IL S NP
Sbjct: 72 LNTGAFEKAI---KECAENGGGKVIVPNGKYLTGAIHLESNVNLHLDDNAEILFSTNPKD 128
Query: 115 WDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG--SVWWDWFSSQSL 172
+ +V + G E+ Y L+ +V +TG GT++GQ S WW W +S
Sbjct: 129 YPIVH---TSFEGTEV--MNYSPLVYAKNKTNVAITGK-GTLNGQANSSNWWVWSGGKSY 182
Query: 173 ------------------------------------NYSRPHLVEFISSENVVVSNLTFL 196
Y RP+ +EF V++ ++ +
Sbjct: 183 GWQKGNPSQNDPANREVLVDMAEKGVPVTERVFGEGRYLRPNFIEFFECNTVLIKDIKII 242
Query: 197 NAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKS 256
NAP + +HP+ +N+ I ++V++ P G P+ S N+ I++C+ G D I++KS
Sbjct: 243 NAPFWILHPMKSNNIIIDGVTVNS--HGPNNDGCDPEYSQNIIIKNCVFNTGDDCIAIKS 300
Query: 257 GWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN---G 313
G D G P+ ++ ++ + G V GSE+S G++NV VE + DS N
Sbjct: 301 GRDADGRRVAIPSKNIIVQNCKMIDGHG-GVVIGSEISAGVNNVFVENC-IMDSPNLDRA 358
Query: 314 IEFRTTKGRGGYIRQIVISDAE-------LYNINVAFGACG-NCGSHPDDDFDPDALPAI 365
I +T RGG I + + + E + +N+ + G GS +P I
Sbjct: 359 IRIKTNSKRGGVIEDVYVRNLEVGTVKECVLKLNMFYNVYGSQTGSF---------IPVI 409
Query: 366 DQITFKDIIGTNITIAGNF----TGIQEAPFANICLSNISLS 403
I+ +++ + AG + G +E+P N+ L N+ +
Sbjct: 410 RNISLENV---TVKKAGKYGVWAEGYKESPVENVTLKNVVIE 448
>gi|448349773|ref|ZP_21538602.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
gi|445639084|gb|ELY92202.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
Length = 522
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 170/394 (43%), Gaps = 38/394 (9%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
P I EFGA NT A Q A L A GG + VP G ++TG +
Sbjct: 4 PDTGRYDIREFGAQSGSDDSNTEAIQTA---LDECAGTGGT-VSVPPGTYVTGPLRVGDR 59
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
TL LE GA + + ++ + S G + G L++G D V G
Sbjct: 60 TTLHLEAGATL---RFVGDYEAFPTVQSRWEGWDQIGFHPCLLVDGT---DTVSITGQGA 113
Query: 156 IDGQGSVWWDW------------------FSSQSLNYS-------RPHLVEFISSENVVV 190
IDG G WW + F +Q+ RP L++ +ENV V
Sbjct: 114 IDGNGEYWWQFYGEPEPMLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQIFDAENVTV 173
Query: 191 SNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHD 250
S +T N+P +N H VY NV I ++++ P +P GI DSS V I D I G D
Sbjct: 174 SGVTLRNSPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSSRYVRISDAYINAGDD 233
Query: 251 AISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
AI +KSG D G G P + + + +++ G V GSEMSG + +V V D+
Sbjct: 234 AICIKSGKDAEGREVGEPASQITVANCTVEAGHG-GVVIGSEMSGDVRDVTVSNCTFTDT 292
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP--DALPAIDQI 368
GI +T +GRGG + + + I F G + D D +P + P + +
Sbjct: 293 DRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPEPTGEGTPLVRNV 352
Query: 369 TFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 402
+F +I N+ AG F G+ E F I ++ +
Sbjct: 353 SFSNITARNVETAGFFAGLPERYFEGISFRDVRI 386
>gi|374376182|ref|ZP_09633840.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
gi|373233022|gb|EHP52817.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
Length = 547
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 192/424 (45%), Gaps = 77/424 (18%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT+FGAV DG TLNT + Q AI + KGG + VP G WLTG L S++ L L
Sbjct: 40 ITKFGAVPDGYTLNTKSIQAAI---DACTAKGGGVVAVPPGLWLTGPLTLKSNVNLNLAA 96
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
GA +L +++ + + +V + G E R +S I+ ++ +TG NG IDG G
Sbjct: 97 GATLLFTKDKTQYPLVK---ANWEGFEQ--MRNQSPISAKNAVNIAITG-NGIIDGNGDA 150
Query: 163 W------------WD---------------WFSSQSL----------------------- 172
W W W S+S
Sbjct: 151 WRMVKKDKLTESQWKNLVASGGVLAEGGKTWMPSESYAKGNAMKDPGRLSPDKDAAFYQS 210
Query: 173 --NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGI 230
++ RP+LV S + V++ +TF N+PA+ +HP+ N+ ++N+ V P + GI
Sbjct: 211 VKDFFRPNLVVLTSCDKVLLEGVTFQNSPAWCLHPLMSKNITVRNVFVKNPWYAQNGDGI 270
Query: 231 VPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFG 290
+S NV IE+ +G D + +KSG D G PT DV IR + ++ G V G
Sbjct: 271 DLESCSNVLIENSKFDVGDDGLCMKSGRDADGRKRAMPTKDVIIRGCTVYAAHGGFVV-G 329
Query: 291 SEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI---NVAFGACG 347
SEMSGG++NV V S G+ F+TT+GRGG + I I D + +I V F
Sbjct: 330 SEMSGGVNNVYVSNCTFIGSDIGLRFKTTRGRGGIVENIFIKDIFMKDIPGDAVLFDMYY 389
Query: 348 NCGSHPDDDFDPDALP-----AIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANI 395
+ LP A+D+ T F++I +NI + G G+ E NI
Sbjct: 390 MAKDPIALAGEKRELPKVEKLAVDETTPQFRNIQISNIYVNGAQRAVFLRGLPEMAVKNI 449
Query: 396 CLSN 399
+SN
Sbjct: 450 SISN 453
>gi|307135908|gb|ADN33771.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Cucumis melo subsp. melo]
Length = 188
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 103/166 (62%), Gaps = 7/166 (4%)
Query: 5 VALLLLLALCSAILINGEVSDGQCDDQ----PTLDPRPHSVSITEFGAVGDGKTLNTLAF 60
++ ++LLAL S + G+ QC P ++ R H+ +T+FG VGDG T NT AF
Sbjct: 17 ISAVILLALVSLATVEGK---RQCPTNYLQVPAINCRQHTAVLTDFGGVGDGVTSNTQAF 73
Query: 61 QNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDP 120
+ AI +L A GGAQL VP GKWLTGSFNLTSH TLF+ K A IL SQ+ S W V
Sbjct: 74 RRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATILASQDESEWPQVAI 133
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDW 166
LPSYG G + PG RY SLI G L DVV+TG+NG Q V D+
Sbjct: 134 LPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGCKSSQLQVQLDY 179
>gi|376338086|gb|AFB33588.1| hypothetical protein 2_7803_01, partial [Pinus mugo]
Length = 138
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 95/137 (69%)
Query: 256 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 315
SGWDEYGI YGRP++++ IRRV+ ++ + S +A GSEMSGGI V + I +++S G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 316 FRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 375
+T GRGGY++ + IS+ + N++V G G HPDD +DP+ALP I +ITFKDIIG
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 376 TNITIAGNFTGIQEAPF 392
I AG+ GIQ APF
Sbjct: 121 DEIKTAGSVXGIQNAPF 137
>gi|361068129|gb|AEW08376.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 95/138 (68%)
Query: 256 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 315
SGWDEYGI YGRP++++ IRRV+ Q+ + S ++ GSEMSGGI V + I +++S G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLSLGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 316 FRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 375
+T GRGGY++ + IS+ + N++V G G HPDD +DP+ALP I +ITFKDIIG
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 376 TNITIAGNFTGIQEAPFA 393
I AG+ GIQ APF
Sbjct: 121 DEIKTAGSVEGIQNAPFK 138
>gi|269119326|ref|YP_003307503.1| glycoside hydrolase family protein [Sebaldella termitidis ATCC
33386]
gi|268613204|gb|ACZ07572.1| glycoside hydrolase family 28 [Sebaldella termitidis ATCC 33386]
Length = 509
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 186/383 (48%), Gaps = 30/383 (7%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+ I EFGAVGDGKT+NT A Q AI + + + + G +LTG L S++T+ +
Sbjct: 82 LDIREFGAVGDGKTVNTFAIQTAIL-----SAPENSIIEIRDGNYLTGPVLLKSNITINI 136
Query: 101 EKGAVILGSQN-------PSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDN 153
A + + P+ + D G P + SL G + +V +TG+
Sbjct: 137 AGNARLTALKEREMYPILPASINKADRTFYLGSWEGEPAACFASLFTGVSVNNVNITGE- 195
Query: 154 GTIDGQG--SVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNV 211
GTIDG WW + +++ RP + N+ + + N+P++ +HPV+ SN+
Sbjct: 196 GTIDGNSDRETWWKDAKIKRISW-RPRTIFLTDCSNINIVGINIENSPSWTLHPVFSSNL 254
Query: 212 HIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTD 271
++ + P +SP T GI P+S NV I ++G D I++KSG + G G P+ +
Sbjct: 255 GFFDMKIRNPKDSPNTDGIDPESCKNVSIIGVKFSVGDDCIAIKSGKGKIGREIGIPSEN 314
Query: 272 VHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQI-- 329
++I ++ G V GSEMSGGI NV ++ ++ G+ +T +GRGG I I
Sbjct: 315 INIENCHMEFGHG-GVVIGSEMSGGIKNVNIKNCLFENTDRGLRIKTRRGRGGIIDGIHA 373
Query: 330 --VISDAEL--YNINVAFGACGNCGS-----HPDDDFDPDALPAIDQITFKDIIGTNITI 380
++ D L + IN F C + G + D + P I ITFK+++ N +
Sbjct: 374 ENIVMDKVLTPFVIN-EFYYCDSDGKTEYVWNKDKLEITEETPVIKNITFKNMVCKNSEV 432
Query: 381 -AGNFTGIQEAPFANICLSNISL 402
AG G+ E + L N+++
Sbjct: 433 CAGFMYGLPERKIERVVLENLTI 455
>gi|189464497|ref|ZP_03013282.1| hypothetical protein BACINT_00839 [Bacteroides intestinalis DSM
17393]
gi|189438287|gb|EDV07272.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 492
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 178/396 (44%), Gaps = 74/396 (18%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
++ A +GG +Y P G +LT + ++ S++TL+LE GAV+ S D LP
Sbjct: 45 IEKAASEGGGTIYFPVGTYLTATIHMKSNITLYLESGAVLRFSDKFE-----DYLPFVT- 98
Query: 127 GIELPGRRYKSL---INGYMLRDVVVTGDNGTIDGQGSVWWDW-FSSQSL---------- 172
+ G KSL I + +V ++G GT+DG G WW W F ++ +
Sbjct: 99 -LRWEGTVMKSLSPLIYAHSADNVTISG-RGTLDGNGLKWWLWEFDTRKVIKENGGKLPT 156
Query: 173 ---------------------------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHP 205
RP ++F N+++ N+ +N+P + I+P
Sbjct: 157 LDKLQQMWVDANKDLEISDYYKPSLERRMFRPPFIQFYECTNILIENVKIINSPFWTINP 216
Query: 206 VYCSNVHIQNISVHAP---PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYG 262
+C NV I ++++ P P+ P T GI P S NV I DC I++G D I++KSG D G
Sbjct: 217 AFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDADG 276
Query: 263 IAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN-GIEFRTTKG 321
YG+ ++ I ++ S G V GSEMSGG+ V + ++D N GI + ++G
Sbjct: 277 RKYGKACENITITNCIMLSGHG-GVVIGSEMSGGVKRVAISNC-VFDGTNAGIRLKASRG 334
Query: 322 RGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDAL----------PAIDQITFK 371
RGG + I + + + NI G D D L P I
Sbjct: 335 RGGVVEDIRVDNIVMKNIQ---------GDAFIFDLFYDRLSKVEPVSERTPIFRNIHLS 385
Query: 372 DIIGTNITIAGNFTGIQEAPFANICLSNISLSINPG 407
++ G +I G GI+E P + + SN+++ G
Sbjct: 386 NVTGNDIKRIGYIKGIEEMPVSELSFSNMNIVAEQG 421
>gi|383150861|gb|AFG57437.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150863|gb|AFG57438.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150865|gb|AFG57439.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150867|gb|AFG57440.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150869|gb|AFG57441.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150871|gb|AFG57442.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150873|gb|AFG57443.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150875|gb|AFG57444.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150877|gb|AFG57445.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150879|gb|AFG57446.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150881|gb|AFG57447.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150883|gb|AFG57448.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150885|gb|AFG57449.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150887|gb|AFG57450.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150889|gb|AFG57451.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150891|gb|AFG57452.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150893|gb|AFG57453.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 95/137 (69%)
Query: 256 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 315
SGWDEYGI YGRP++++ IRRV+ ++ + S +A GSEMSGGI V + I +++S G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 316 FRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 375
+T GRGGY++ + IS+ + N++V G G HPDD +DP+ALP I +ITFKDIIG
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 376 TNITIAGNFTGIQEAPF 392
I AG+ GIQ APF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|255594301|ref|XP_002536062.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223521016|gb|EEF26321.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 412
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 185/390 (47%), Gaps = 34/390 (8%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
S + +GA GDG T +T A Q AI A GG + + +++G L SH+TL
Sbjct: 22 SCDVKAYGATGDGVTKDTAAIQKAID--DCAAAGGGTVVLAGAPMYVSGPLVLKSHITLS 79
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
+ G + GS+ + +++ L GR + L++ D+ + G GTIDG+
Sbjct: 80 IATGTTLAGSEEHDDYPLIEELRESGR---------QPLLSSDKATDITING-GGTIDGR 129
Query: 160 GSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVH 219
G WW +S RP L+ F S ++++ N+T N+P++ I P Y +++ +N++V+
Sbjct: 130 GQSWW---PDRSAANKRPRLIVFRHSSHILMENITVQNSPSWQIVPYYSTDLVFRNMTVY 186
Query: 220 APPE-SPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGW------DEYGIAYGRPTTDV 272
AP S T GI P SS +V IE I G D I++KSG DE P+ D+
Sbjct: 187 APDRVSHNTDGIDPFSSSHVLIEHVTIDTGDDNIAIKSGQPNSPGGDE-------PSHDI 239
Query: 273 HIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVIS 332
IR G S+ GSE++GG+ NV E+IH + G+ ++ + RG ++ V
Sbjct: 240 VIRDSTFLHGHGLSI--GSEVAGGVYNVLAERIHFKGTGTGVRIKSNRDRGNELKHFVYR 297
Query: 333 DAELYNINVAFGACGNCGSHPDD-DFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQE 389
D ++ ++N PD D P P IT +++ T A G+ E
Sbjct: 298 DLKMEDVNTPILISEFYPKIPDVIDSQPVGRLTPRFSDITIENLTATGARQAAIIVGLPE 357
Query: 390 APFANICLSNISLSINPGSYNSWECSNIHG 419
+P + L+N+ + + G+ + + G
Sbjct: 358 SPVTGLKLTNVRIKADKGAVIKYAHMDTKG 387
>gi|218129299|ref|ZP_03458103.1| hypothetical protein BACEGG_00876 [Bacteroides eggerthii DSM 20697]
gi|217988476|gb|EEC54797.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 533
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 205/442 (46%), Gaps = 81/442 (18%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGS 89
+QP+ ++V+I +FGA GDG TLNT A +AI K+ KGG ++ +P G WLTG
Sbjct: 49 EQPSFPD--YTVNILQFGAKGDGITLNTKAINDAI---KAVNAKGGGKVVIPEGLWLTGP 103
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
L S++ L+ EK A+I+ S + + + + L + G L RR +S I+ ++ +
Sbjct: 104 IELLSNVNLYTEKNALIVFSDDFNAYPI---LETSFEG--LNTRRCQSPISARNAENIAI 158
Query: 150 TGDNGTIDGQGSVW------------WD-------------WF-SSQSLN---------- 173
TG G DG G W WD W+ ++ SL
Sbjct: 159 TG-YGVFDGSGDSWRPVKKGKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKEFNN 217
Query: 174 ---------------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISV 218
+ RP L+ + S+ V++ +TF N+P++ +HP+ C ++ I + V
Sbjct: 218 PEGIETEEEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKV 277
Query: 219 HAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVL 278
P S + +S N I + I G DAI +KSG D+ G G P +V ++
Sbjct: 278 FNPWYSQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKNNT 337
Query: 279 LQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYN 338
+ G V GSEMSGG+ N+ V + G+ F++T+GRGG + I I + + +
Sbjct: 338 VLHGHGGFVV-GSEMSGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHMID 396
Query: 339 I-------NVAFGACGNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN--- 383
I ++ +G G ++D +I ++T F++I +NI G+
Sbjct: 397 IPHEPLLFDLFYGGKA-AGEETEEDLKSRMKASIPEVTVETPSFRNIHISNIICKGSGRA 455
Query: 384 --FTGIQEAPFANICLSNISLS 403
F G+ E P N+ + N+ +S
Sbjct: 456 MFFNGLPEMPIRNVTVKNVIIS 477
>gi|374311245|ref|YP_005057675.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753255|gb|AEU36645.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 467
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 157/305 (51%), Gaps = 14/305 (4%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+++ +FGA GDG TL T + Q A+ GG ++ +P+G++LTG +L S +TL
Sbjct: 49 QLNVRDFGATGDGSTLETASLQQALDRCNVL---GGGEVLIPAGRYLTGGLSLRSRVTLR 105
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
L+K A +LGS + +H+ V G +PG Y +L++ R++ + G+ G I+G
Sbjct: 106 LDKDATLLGSPDLAHYPVAQ---VRWEGKWIPG--YTALLHALDARNIAIVGE-GKIEGN 159
Query: 160 GSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVH 219
+V L RP L+EFI+ + V + ++ A ++IHP C N+ +N+++
Sbjct: 160 EAVAGRPTKDNPLR--RPALLEFINCDGVHLEGISTSYAHMWSIHPTCCDNLVFRNLTIR 217
Query: 220 APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLL 279
+ + GI DS +V I+ C IA G D ISLKSG E RPT DV I L
Sbjct: 218 STKTNGD--GIDIDSCRHVLIDSCDIASGDDCISLKSGRGEEAYTMNRPTEDVRITNCTL 275
Query: 280 QSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIRQIVISDAELYN 338
+ + + G+E S GI NV +E H+ I ++ GRG +I + + D +
Sbjct: 276 EGRGFACLGIGTESSAGIRNVIIEHCHITSVYKYAIYIKSRIGRGAFIENLTVRDMDAAR 335
Query: 339 INVAF 343
+ + F
Sbjct: 336 MRMGF 340
>gi|218129085|ref|ZP_03457889.1| hypothetical protein BACEGG_00659 [Bacteroides eggerthii DSM 20697]
gi|217988720|gb|EEC55039.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 445
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 178/407 (43%), Gaps = 60/407 (14%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V + E G NT N I L GG L+ PSG +LT S ++ S++TL
Sbjct: 21 ERVDMREAGVDNQEALKNTEIINNTINRLNK---AGGGTLFFPSGDYLTASIHMKSNITL 77
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LE GA + S N D + + G+ + + ++ LI ++ + G+ G +DG
Sbjct: 78 ELEAGATLRFSDNFD--DYMPFVEMRHEGVMM--KSFQPLIYATDAENITIKGE-GKLDG 132
Query: 159 QGSVWW----------------------------------------DWFSSQSLNYSRPH 178
QG WW DW S+ + RP
Sbjct: 133 QGKAWWKEFFRVLIDLRDNGKRDINKYQPLFEQANDMKTLYAETNVDWHSTLDRRFLRPP 192
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
++ + NV + +T +N+P + ++P +C NV ++ ++++ P SP T GI P+S NV
Sbjct: 193 FIQPLRCRNVRIEGITIVNSPFWTVNPNFCDNVTVKGVTINNVP-SPNTDGINPESCSNV 251
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
I DC I++G D I++KSG D GRP ++ I + S G V GSEMSGG+
Sbjct: 252 HISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLSGHG-GVVIGSEMSGGVK 310
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD 358
V + + GI ++T+GRGG + I +S+ + +I S +
Sbjct: 311 KVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSDIKREAVVLNLKYSQMKMEKK 370
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFT-----GIQEAPFANICLSNI 400
+ P F++I T +T+ G T G+ EAP I +I
Sbjct: 371 SERTPV-----FRNIFVTGLTVRGTQTPLKVDGLPEAPIEGIVFRDI 412
>gi|224536535|ref|ZP_03677074.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521791|gb|EEF90896.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
Length = 491
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 189/418 (45%), Gaps = 69/418 (16%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
++ A +GG +Y P+G +LT + ++ S++TL LE GA++ S D + + +
Sbjct: 45 IEKAASEGGGTIYFPAGTYLTATIHMKSNITLHLESGAIVRFSDR--FEDYLPFVTARWE 102
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDW-FSSQSL------------- 172
G + + LI + ++ +TG GT+DG G WW W F ++ +
Sbjct: 103 GTVM--QTLSPLIYAHSADNLTITG-RGTLDGNGLKWWLWEFETRKVIKENGGKLPSLDK 159
Query: 173 ------------------------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
RP ++F N+++ N+ +N+P + ++P +C
Sbjct: 160 LQQMWVDANNDLEISDYYKPSLERKMFRPPFIQFYECTNILIENVKIINSPFWTVNPAFC 219
Query: 209 SNVHIQNISVHAP---PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAY 265
NV I ++++ P P+ P T GI P S NV I DC I++G D I++KSG D G Y
Sbjct: 220 DNVTIHGVTINNPSSNPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDADGRKY 279
Query: 266 GRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN-GIEFRTTKGRGG 324
G+ ++ I ++ S G V GSEMSGG+ + + ++D N GI + ++GRGG
Sbjct: 280 GKACENITITNCIMLSGHG-GVVIGSEMSGGVKRIAISNC-VFDGTNAGIRLKASRGRGG 337
Query: 325 YIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDAL----------PAIDQITFKDII 374
+ I + + + NI G D D L P I ++
Sbjct: 338 VVEDIRVDNIVMKNIQ---------GDAFIFDLFYDRLSKVEPVSERTPIFRNIHLSNVT 388
Query: 375 GTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPEL 432
G +I G GI+E P + + SN+++ G + + ++I ++ S E P L
Sbjct: 389 GNDIKRIGYIKGIEEMPISELSFSNMNIVAGKG-FQAETATDIRFNNVSFTVEEGPSL 445
>gi|423223595|ref|ZP_17210064.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638220|gb|EIY32067.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 491
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 189/418 (45%), Gaps = 69/418 (16%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
++ A +GG +Y P+G +LT + ++ S++TL LE GA++ S D + + +
Sbjct: 45 IEKAASEGGGTIYFPAGTYLTATIHMKSNITLHLESGAIVRFSDR--FEDYLPFVTARWE 102
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDW-FSSQSL------------- 172
G + + LI + ++ +TG GT+DG G WW W F ++ +
Sbjct: 103 GTVM--QTLSPLIYAHSADNLTITG-RGTLDGNGLKWWLWEFETRKVIKENGGKLPSLDK 159
Query: 173 ------------------------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
RP ++F N+++ N+ +N+P + ++P +C
Sbjct: 160 LQQMWVDANKDLEISDYYKPSLERKMFRPPFIQFYECTNILIENVKIINSPFWTVNPAFC 219
Query: 209 SNVHIQNISVHAP---PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAY 265
NV I ++++ P P+ P T GI P S NV I DC I++G D I++KSG D G Y
Sbjct: 220 DNVTIHGVTINNPSSNPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDADGRKY 279
Query: 266 GRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN-GIEFRTTKGRGG 324
G+ ++ I ++ S G V GSEMSGG+ + + ++D N GI + ++GRGG
Sbjct: 280 GKACENITITNCIMLSGHG-GVVIGSEMSGGVKRIAISNC-VFDGTNAGIRLKASRGRGG 337
Query: 325 YIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDAL----------PAIDQITFKDII 374
+ I + + + NI G D D L P I ++
Sbjct: 338 VVEDIRVDNIVMKNIQ---------GDAFIFDLFYDRLSKVEPVSERTPIFRNIHLSNVT 388
Query: 375 GTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPEL 432
G +I G GI+E P + + SN+++ G + + ++I ++ S E P L
Sbjct: 389 GNDIKRIGYIKGIEEMPISELSFSNMNIVAGKG-FQAETATDIRFNNVSFTVEEGPSL 445
>gi|224537921|ref|ZP_03678460.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520465|gb|EEF89570.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
Length = 964
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 196/460 (42%), Gaps = 83/460 (18%)
Query: 30 DQPTL---DPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWL 86
D P L D + +S+TE+G VGDG TLNT F+ AI +L + KGG L VP+G WL
Sbjct: 22 DMPQLQLPDIPGNRISLTEYGGVGDGITLNTECFREAIEHLSA---KGGGTLVVPTGIWL 78
Query: 87 TGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGI-ELPGRRYKSLINGYMLR 145
TG L SH+ L LEK A+++ + + W PS E+ R+ +S I+ Y
Sbjct: 79 TGPIRLKSHIELHLEKNALLIFTSD--FWS----YPSRSTFFTEVFYRQLQSPISAYNES 132
Query: 146 DVVVTGDNGTIDGQGSVW------------WDWFSSQS---------------------- 171
D+ +TG+ G IDG G W W+ +S
Sbjct: 133 DIAITGE-GVIDGSGQDWRPVRKNKVTVDEWEHLQRKSGVLNDAGTIWYPMADDVQRYAR 191
Query: 172 ------------------LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHI 213
+Y RP L+ E V++ +TF N+P +N+HP C ++ +
Sbjct: 192 REENIIHKYNTPDEWVRLKDYVRPELMHLYHCERVLLQGVTFQNSPFWNLHPELCKHLIV 251
Query: 214 QNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVH 273
+ V P S G+ +S NV + +G DA+ +KSG +E G G P +V
Sbjct: 252 DGVCVRNPWNSQNGDGLDIESCQNVLVVQSTFDVGDDAVCIKSGRNEAGRLRGMPAKNVV 311
Query: 274 IRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD 333
+ + G V GSEMSGG+ ++ V ++ G+ F++ + RGG++ I I +
Sbjct: 312 VEDCTVFHGHGGFVV-GSEMSGGVHSILVRNCKFLNTDTGLRFKSNRQRGGHVSDIYIQN 370
Query: 334 AEL-------------YNINVAFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNI 378
+ Y A A + + P + P D I D+
Sbjct: 371 VYMCGIAAEPILFDMYYQGKSAVEAMEDALKGSMETIPPVTEKTPKFDHIHISDVHCYQA 430
Query: 379 TIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIH 418
A F G+ E ++I L N+++ G S EC+ +
Sbjct: 431 GRALLFDGLPEQNISDITLRNVTIHAVEGGVFS-ECTAVR 469
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 121/264 (45%), Gaps = 42/264 (15%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG ++ +P G++ T + +L S++ L LEKGAV+ +P D + + S G++ R
Sbjct: 580 GGGRVVIPKGEYYTAAIHLLSNVNLHLEKGAVLRFLTSPE--DYLPVVVSRWEGVDC--R 635
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGSV--WWDWFSSQSLNYS---------------- 175
LI +V +TG GT+DGQ S WW W +S +
Sbjct: 636 TLSPLIYANGQTNVAITG-AGTLDGQASRDNWWSWKGRKSSSEQNTEAKVGKDKLLWMEQ 694
Query: 176 ----------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVH 219
RP ++F V+V +T + +P + +HP+ NV ++ +
Sbjct: 695 NRISLDERIFSVNDKLRPPFIQFYRCNRVLVEGVTIIRSPFWMLHPLLSKNVIVRGVKFD 754
Query: 220 APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLL 279
+ P G P+S +NV IE C G D +++KSG + G + P+ ++ +R ++
Sbjct: 755 S--HGPNNDGCDPESCENVLIESCDFNNGDDCVAIKSGKNNDGRTWNLPSRNIIVRNCIM 812
Query: 280 QSSSGSSVAFGSEMSGGISNVQVE 303
+ + VA GSE+SG +V V
Sbjct: 813 RDGH-AGVAVGSEISGSCYDVWVR 835
>gi|371778396|ref|ZP_09484718.1| glycoside hydrolase [Anaerophaga sp. HS1]
Length = 572
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 198/437 (45%), Gaps = 82/437 (18%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
VSI +FGAVGDG T N+ AF AI Y+ ++KGG ++ VP G WLTG + S++ L +
Sbjct: 63 VSIVDFGAVGDGVTDNSEAFAKAIDYV---SEKGGGRVIVPRGIWLTGPIIMKSNIDLHV 119
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
++GAV+ S + + +++ + L R S I+ + L ++ TG G DG G
Sbjct: 120 QQGAVVRFSPDFEDYPLIETIFE-----GLNTFRCMSPIHAHNLENIAFTG-KGIFDGNG 173
Query: 161 SVW------------WD---------------WFSSQS---------------------- 171
W W W+ S+
Sbjct: 174 DAWRPVKKSKLTESQWKKLVNSGGVLSDDGQIWYPSEKSKAGDSRDNFNVPDLERKEDFE 233
Query: 172 --LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVG 229
++ RP +V + V++ TF N+PA+NIHP+ C +V I+N++V P S G
Sbjct: 234 KIKDFLRPVMVSIKECKRVLLDGPTFQNSPAWNIHPLLCEDVTIRNLTVRNPWYSQNGDG 293
Query: 230 IVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAF 289
+ +S NV I + +G DAI KSG DE G PT +V ++ ++ G V
Sbjct: 294 LDLESCKNVVIYNNSFDVGDDAICFKSGKDEDGRKRAVPTENVVVKNNVVYHGHGGFV-I 352
Query: 290 GSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-------NVA 342
GSEMSGG+ NV V + G+ F++T+GRGG + I IS+ ++ +I N+
Sbjct: 353 GSEMSGGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIYISNIDMIDIPTEPIRFNLF 412
Query: 343 FGAC-------GNCGSHPD-DDFDP----DALPAIDQITFKDIIGTNITIAGNFTGIQEA 390
+G GN S PD + +P + PA I K+I A F G+ E
Sbjct: 413 YGGKSPVLDDGGN--SVPDIQENEPAPVTEETPAFRNIFMKNIRANGFGNAAFFMGLPEM 470
Query: 391 PFANICLSNISLSINPG 407
N+ L N L G
Sbjct: 471 NLQNVHLENALLRAAKG 487
>gi|376338082|gb|AFB33586.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 94/137 (68%)
Query: 256 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 315
SGWDEYGI YGRP++++ IRRV+ Q+ + S +A GSEMSGGI V + + +++S G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 316 FRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 375
+T GRGGY+R + IS+ + N++V G G HPDD +DP+AL I +ITFKDIIG
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALXDIQRITFKDIIG 120
Query: 376 TNITIAGNFTGIQEAPF 392
I AG+ GIQ APF
Sbjct: 121 DEIKTAGSVXGIQNAPF 137
>gi|420264265|ref|ZP_14766898.1| polygalacturonase [Enterococcus sp. C1]
gi|394768641|gb|EJF48547.1| polygalacturonase [Enterococcus sp. C1]
Length = 438
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 178/363 (49%), Gaps = 25/363 (6%)
Query: 55 LNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSH 114
L T A Q I L +GG ++ +G++ TG+ L S++ L L GA ++ S +P
Sbjct: 16 LLTEAIQEKIDELHQ---QGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKD 72
Query: 115 WDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWF--SSQSL 172
+ VV R + Y S + ++ VTG G +DGQG WW F + + L
Sbjct: 73 YPVV-----VSRWEGVKREVYASCLYAENAENIAVTG-LGMLDGQGQRWWKTFRENREQL 126
Query: 173 NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVP 232
Y RP L+ F S + + + ++ +++P++ ++P+ C N+ I N+ + P +SP T GI P
Sbjct: 127 AYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTDGIDP 186
Query: 233 DSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSE 292
+S NV I +C I +G D I++KSG ++ ++ I + G +V GSE
Sbjct: 187 ESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCHMLHGHG-AVVLGSE 243
Query: 293 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CG 347
MSG I NV + D+ GI ++ +GRGG I I +++ + N+ F CG
Sbjct: 244 MSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCG 303
Query: 348 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 401
G D + P + P +I F +I N+ A F G+ E ++I +I+
Sbjct: 304 PKGKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIA 363
Query: 402 LSI 404
+S+
Sbjct: 364 VSM 366
>gi|167764884|ref|ZP_02437005.1| hypothetical protein BACSTE_03276 [Bacteroides stercoris ATCC
43183]
gi|167697553|gb|EDS14132.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 550
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 197/430 (45%), Gaps = 79/430 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
++VSI +FGA DG TLNT A +AI K+ KGG ++ +P G WLTG L S++ L
Sbjct: 74 YTVSILQFGAKSDGTTLNTKAINDAI---KAVNAKGGGKVVIPEGLWLTGPIELLSNVNL 130
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
EK A+++ + + + + + L + G L RR +S I+ ++ +TG G DG
Sbjct: 131 HTEKNALVVFTDDFNAYPI---LETSFEG--LNTRRCQSPISARNAENIAITG-YGVFDG 184
Query: 159 QGSVW------------WD-------------WF-SSQSLN------------------- 173
G W WD W+ ++ SL
Sbjct: 185 SGDSWRPVKKSKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKNFNNPEGIETDEE 244
Query: 174 ------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
+ RP L+ + S+ V++ +TF N+P++ +HP+ C ++ I + V P S
Sbjct: 245 WNEIRPWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNG 304
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV 287
+ +S N I + I G DAI +KSG DE G G P +V ++ + G V
Sbjct: 305 DALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGHGGFV 364
Query: 288 AFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-------N 340
GSEMSGG+ N+ V + G+ F++T+GRGG + I I + + +I +
Sbjct: 365 V-GSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHMIDIPHEALLFD 423
Query: 341 VAFGACGNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQEA 390
+ +G G ++D A+ Q+T F+DI +NI G+ F G+ E
Sbjct: 424 LFYGGKA-AGEETEEDLKGRMKTAVPQVTVETPSFRDIHISNIICKGSGRAMFFNGLPEM 482
Query: 391 PFANICLSNI 400
P N+ + ++
Sbjct: 483 PIRNVTVKDV 492
>gi|395803621|ref|ZP_10482865.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434175|gb|EJG00125.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 553
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 215/477 (45%), Gaps = 87/477 (18%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPR----------PHSVSITEFGAVG 50
MK +LL +AL S L VS + D ++ + ++V++ +FGAV
Sbjct: 1 MKTNRKILLCIALTSFSLSFNTVSAQKYDTYKNIEFKMTEVQEPVIPNYNVNLKDFGAVN 60
Query: 51 DGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQ 110
G LNT AF +AI + + KGG +L +P G WLTG L S++ L E+GA+I S
Sbjct: 61 GGYVLNTKAFADAI---DALSKKGGGKLIIPPGIWLTGPIILKSNIELHAERGALIKFST 117
Query: 111 NPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVW------- 163
+ S + +++ + G L R S I G L ++ TG NG DG G W
Sbjct: 118 DKSLYPIIE---TSFEG--LNTWRCISPIYGKNLENIAFTG-NGVWDGSGEAWRQVKKSK 171
Query: 164 -----WD---------------WFSSQSL-------------------------NYSRPH 178
W W+ S+ ++ RP
Sbjct: 172 LTDEQWKKFVASGGVLNEKKDSWYPSEQYLKGAKGADQNIRHDLKTKEDFEAIHDFLRPV 231
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
LV +S+ V+ F N+PA+N+HP+ ++ ++N++V P S G+ +S NV
Sbjct: 232 LVSIQNSKRVMFDGPVFQNSPAWNLHPLLIEDLIVRNVTVRNPWFSQNGDGLDVESCKNV 291
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
IE+ +G DAI +KSG D+ G G P ++ ++ ++ G V GSEMSGG+
Sbjct: 292 IIENSSFDVGDDAICIKSGKDKDGRDRGVPCENIIVKNNIVYHGHG-GVTVGSEMSGGVK 350
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-------NVAFG--ACGNC 349
N+ V + G+ F++T+GRGG + I ISD + +I ++ +G +
Sbjct: 351 NLHVSNCTFMGTDVGLRFKSTRGRGGVVENIYISDVFMTDIPSQAISFDLYYGGKSIAET 410
Query: 350 GSHPDDDFDPDALPAIDQI-TFKDIIGTNITIAGN-----FTGIQEAPFANICLSNI 400
+ + A+P ++ FK+I NITI G G+ E NI ++N+
Sbjct: 411 LAEGGNTVSTKAIPVNEETPQFKNISIKNITIKGAQQAVFLQGLPEMNLENIEITNL 467
>gi|354581296|ref|ZP_09000200.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
gi|353201624|gb|EHB67077.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
Length = 522
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 198/447 (44%), Gaps = 74/447 (16%)
Query: 22 EVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVP 81
+ + C D P + ++V IT++GAVGDG NTLAF AI ++ A GG ++ +P
Sbjct: 3 QTEEAICPDLPVIPE--YTVMITDYGAVGDGVYDNTLAFHQAI---EACAKAGGGKVVIP 57
Query: 82 SGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSY-GRGIELPGRRYKSLIN 140
G W TG L S + L GA+++ S+ + + + +Y GR + R +S ++
Sbjct: 58 PGIWHTGPLTLQSRIELHASAGALVMFSKQFEAYPI--RMSAYEGRQM----FRCQSPLD 111
Query: 141 GYMLRDVVVTGDNGTIDGQGSVW------------WD--------------WFSSQSL-- 172
G L D+ TG +G DG G W WD W+ + +
Sbjct: 112 GEGLEDIAFTG-SGIFDGGGEAWRPVKQGKLTESQWDRLIHTGGVVDDGGLWWPTPAARD 170
Query: 173 -----------------------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
+Y RP+L+ + + ++++ TF N+ A+ +HP
Sbjct: 171 GMENLARIEQTGSRNPQDYEPVRDYLRPNLLSLRNCKRILLNGPTFQNSAAWCLHPWASE 230
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
+ IQNI+V P + G+ DS V +E+ +G DAI LKSG +E G G+P+
Sbjct: 231 QITIQNITVRNPWYAQNGDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPS 290
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQI 329
+ IR + G + GSEMSGGI +V V + + GI F++ +GRGG + I
Sbjct: 291 ERISIRNCTVYHGHG-GIVVGSEMSGGIKDVHVSDCNFIGTDIGIRFKSCRGRGGVVENI 349
Query: 330 VIS-------DAELYNINVAFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITI 380
I D + + N+ + G + + P + P I +DI+ +
Sbjct: 350 FIERIRMREIDGDAISFNLYYEGKAGSGEYQAEAMLPVTEETPVFRNIVIQDIVCSGAHT 409
Query: 381 AGNFTGIQEAPFANICLSNISLSINPG 407
A G+ E P N+ + +++ G
Sbjct: 410 ALLINGLPEMPVENVTVMRSAITSREG 436
>gi|198277233|ref|ZP_03209764.1| hypothetical protein BACPLE_03445 [Bacteroides plebeius DSM 17135]
gi|198269731|gb|EDY94001.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 478
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 200/432 (46%), Gaps = 77/432 (17%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGAV DGKTLNT A AI + + +GG ++ +P G WLTG L S++ L
Sbjct: 12 YEVNIKDFGAVADGKTLNTEAINKAI---QKVSARGGGKVIIPQGLWLTGPIELQSNVNL 68
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ ++IL S N + + +++ + G+E RR +S I+ ++ +TG +G DG
Sbjct: 69 YTEENSLILFSDNFNDYPIIE---TSFEGLET--RRCQSPISAVNAENIAITG-HGVFDG 122
Query: 159 QGSVW------------WD-------------WFSSQ-SLN------------------- 173
G W W W+ ++ SL
Sbjct: 123 AGDSWRPVKKGKMTESQWKSLLASGGVVENNIWYPTEGSLKGAKACKEFNNPEGIETEEQ 182
Query: 174 ------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
+ RP L+ +NV++ +TF N+P++ +HP+ C ++ I + V P S
Sbjct: 183 WNEIRPWLRPVLLSLAKCKNVLLKGVTFKNSPSWCLHPLSCEHITIDGVKVFNPWYSQNG 242
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV 287
+ +S N + + + G DAI +KSG DE G G P +V ++ ++ G V
Sbjct: 243 DALDLESCTNALVINNVFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNVVLHGHGGFV 302
Query: 288 AFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVI---------SDAELYN 338
GSEMSGG+ N+ V + G+ F++T+GRGG + I I +A L++
Sbjct: 303 V-GSEMSGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVENIHIHNINMIDIPHEALLFD 361
Query: 339 INVAFGACGNCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAP 391
+ A G + +P + + T F+DI +N+T G F G+ E P
Sbjct: 362 LFYGGKAAGEETAEELAGRMKAEVPPVTEETPAFRDIYISNVTARGVGRAMFFNGLPEMP 421
Query: 392 FANICLSNISLS 403
N+ + ++++S
Sbjct: 422 IRNVHIKDVTVS 433
>gi|325570664|ref|ZP_08146390.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
gi|325156510|gb|EGC68690.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
Length = 438
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 178/363 (49%), Gaps = 25/363 (6%)
Query: 55 LNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSH 114
L T A Q I L +GG ++ +G++ TG+ L S++ L L GA ++ S +P
Sbjct: 16 LLTEAIQEKIDELHQ---QGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKD 72
Query: 115 WDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWF--SSQSL 172
+ VV R + Y S + ++ VTG G +DGQG WW F + + L
Sbjct: 73 YPVV-----VSRWEGVKREVYASCLYAENAENIAVTG-LGMLDGQGQRWWKTFRENREQL 126
Query: 173 NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVP 232
Y RP L+ F S + + + ++ +++P++ ++P+ C N+ I N+ + P +SP T GI P
Sbjct: 127 AYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTDGIDP 186
Query: 233 DSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSE 292
+S NV I +C I +G D I++KSG ++ ++ I + G +V GSE
Sbjct: 187 ESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCHMLHGHG-AVVLGSE 243
Query: 293 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CG 347
MSG I NV + D+ G+ ++ +GRGG I I +++ + N+ F CG
Sbjct: 244 MSGDIRNVTISNCIFQDTDRGVRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCG 303
Query: 348 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 401
G D + P + P +I F +I N+ A F G+ E ++I +I+
Sbjct: 304 PKGKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIA 363
Query: 402 LSI 404
+S+
Sbjct: 364 VSM 366
>gi|409198539|ref|ZP_11227202.1| glycoside hydrolase [Marinilabilia salmonicolor JCM 21150]
Length = 531
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 173/359 (48%), Gaps = 50/359 (13%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIE-LPG 132
GG ++ +P G WLTG +L S++ L LE+GA + S+ D D LP E +
Sbjct: 98 GGGKVLIPRGNWLTGPIHLKSNINLHLEEGASLYFSE-----DKEDYLPVVKHRYEGVET 152
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFS------------SQSLNYS----- 175
Y SLI + +V +TG G ++GQG W W + S+ N+
Sbjct: 153 YNYSSLIYAKNIENVAITG-KGILEGQGEHWLKWGTVQPRATATKVPLSRRKNFGKGAGK 211
Query: 176 ---RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVP 232
RP V F S+N+ + +T +P +NIH +Y S++ +++I++++ ES GIV
Sbjct: 212 EGMRPSFVVFWKSKNIFIEGITLRESPMWNIHLIYSSHIVVRDITINSV-ESHNGDGIVL 270
Query: 233 DSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVL---LQSSSGSSVAF 289
DSS + +E ++ G DAI LKSG++E G+ PT +V IR +++ SG V F
Sbjct: 271 DSSSDALLEYNHLSTGDDAIVLKSGFNEEGLEINIPTENVVIRNYYAYDVRTGSGG-VVF 329
Query: 290 GSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-------NVA 342
GSE SGGI N+ V GI F+T +GRG I+ISD ++ NI N A
Sbjct: 330 GSETSGGIRNIYVHDALFEKCDRGIRFKTARGRGNITENIIISDVQMKNIRYEAINFNTA 389
Query: 343 FGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS 401
+ G S P + I +++ + A G+ E NI + NIS
Sbjct: 390 YTGAGVGPS-----------PLVRNIEIRNVKIDGVPNAIVLNGLPEKWIENIYMENIS 437
>gi|413925949|gb|AFW65881.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 213
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 88/116 (75%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RP +SI +FG VGDG+TLNT AF+ A++ ++ +GG L+VP+G WL GSFNLTSH+
Sbjct: 46 RPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHM 105
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGD 152
TLFL +GAV+ +Q+ W +V+PLPSYGRG ELPG RY S I+G LRDVV+TG+
Sbjct: 106 TLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGE 161
>gi|189468045|ref|ZP_03016830.1| hypothetical protein BACINT_04439 [Bacteroides intestinalis DSM
17393]
gi|189436309|gb|EDV05294.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 534
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 200/434 (46%), Gaps = 79/434 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
++V+I +FGA GDG LNT A +AI K+ KGG ++ +P G WLTG L S++ L
Sbjct: 56 YTVNIIDFGAKGDGIVLNTKAINDAI---KAVNAKGGGKVVIPGGLWLTGPIELLSNVNL 112
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E A+IL + + + +++ + G L RR +S I+ + ++ +TG NG DG
Sbjct: 113 YTEMNALILFTDDFEAYPIIE---TSFEG--LNTRRCQSPISAWNAENIAITG-NGVFDG 166
Query: 159 QGSVW------------WD---------------WF----------SSQSLN-------- 173
G W W+ W+ +++ N
Sbjct: 167 SGDSWRPVKKGKLTSSQWNSLVNSGGVVDEAGSIWYPTAGALKGAMATKDFNNPEGIETD 226
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ + S+ V++ +TF N+P++ +HP+ C ++ I N+ V P S
Sbjct: 227 EEWNEIRPWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQ 286
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
+ +S N I + I G DAI +KSG DE G G P +V ++ + G
Sbjct: 287 NGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGHGG 346
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVI---------SDAEL 336
V GSEMSGG+ NV V + G+ F++T+GRGG + I I +A L
Sbjct: 347 FVV-GSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINMIDIPHEALL 405
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQE 389
+++ G + ++PA+ + T F+DI TN+T G F G+ E
Sbjct: 406 FDLFYGGKGAGEESEEELEGRMKSSIPAVTEETPAFRDIHITNVTCKGTGRAMFFNGLPE 465
Query: 390 APFANICLSNISLS 403
P N+ + +I ++
Sbjct: 466 MPIRNVYVKDIVVT 479
>gi|326797905|ref|YP_004315724.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548669|gb|ADZ77054.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 485
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 186/404 (46%), Gaps = 64/404 (15%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT+FGAVGDG T NT AF+ AI ++ + GG ++ VP GK+LTG L S++ L L
Sbjct: 70 ITDFGAVGDGLTKNTEAFKKAI---EACHNNGGGRVVVPYGKFLTGGIYLKSNVNLHLAD 126
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS- 161
A I+ S++ S + +V + R + Y S I Y ++ VTG NG +DG +
Sbjct: 127 SATIVFSRDSSDYPIV-----FTRWEGMECMNYASFIYAYGEENIAVTG-NGILDGNANN 180
Query: 162 -VWWDWFSSQSL----------------------------------NYSRPHLVEFISSE 186
WW W ++ +Y RP+ ++ +
Sbjct: 181 DYWWWWCGAKKYGWREELGKQTPARNALHEMMHEEVDPKKRIFGDGHYLRPNFIQPYQCK 240
Query: 187 NVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIA 246
NV ++++ +N+P +N++PV C NV I+ + V + P G P++ NV I DC
Sbjct: 241 NVWIADVKLINSPMWNLNPVLCENVLIEKVKVIS--HGPNNDGCDPEACKNVWIRDCYFD 298
Query: 247 MGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIH 306
G D I++KSG DE G GRP + I +++ G V GSE++GG N+
Sbjct: 299 TGDDCIAIKSGRDEDGRNIGRPAENHIIENCVMKDGHG-GVVIGSEIAGGAKNIYAINCE 357
Query: 307 LYDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALP 363
+ DS N + +T+ RGG I + + + ++ A C P + +P
Sbjct: 358 M-DSPNLDRVLRIKTSSSRGGIIENVFMKNVQVGTFKEAAVKCNMFYEKPGNH-----IP 411
Query: 364 AIDQITFKDIIGTNITIAGNF----TGIQEAPFANICLSNISLS 403
I I +++ N+ G + Q++P N+ + N +L
Sbjct: 412 TIRNIWVENL---NVEKGGQYALMVAAYQQSPVTNLRMINCNLK 452
>gi|433656005|ref|YP_007299713.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433294194|gb|AGB20016.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 519
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 197/406 (48%), Gaps = 43/406 (10%)
Query: 30 DQPTLDPRPHS--VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLT 87
D+ L +P + +++ +FGA GDGK ++T + Q AI S D G +++ G +LT
Sbjct: 71 DEIVLRTKPETAYINVRDFGANGDGKRIDTFSIQAAII---SCPD--GGRVFFHEGIYLT 125
Query: 88 GSFNLTSHLTLFLEKGAVILGSQN-------PSHWDVVDPLPSYGRGIELPGRR-YKSLI 139
L S++TL L KGAV+LG++ P D SY E + + SLI
Sbjct: 126 YPLFLKSNITLELGKGAVLLGAKEREMYPILPGEIDCKKIEDSYLGSWEGEAKEIFASLI 185
Query: 140 NGYMLRDVVVTGDNGTIDGQGS--VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLN 197
G + +V + G+ GTIDG S WW + + + RP + +NV++ +T N
Sbjct: 186 TGIGVENVNIIGE-GTIDGNSSFDTWWHDAKVKRIAW-RPRTIFLNKCKNVLIEGITIKN 243
Query: 198 APAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSG 257
+P++ IHP+ N+ N+++ P ++P T G+ P+S +V I ++G D I++KSG
Sbjct: 244 SPSWTIHPLLSQNLKFINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKSG 303
Query: 258 WDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFR 317
+ +++IR L++ G +V GSEMSGG+ NV V++ + GI +
Sbjct: 304 KLATSRKLPVSSENLYIRNCLMEYGHG-AVVIGSEMSGGVKNVHVDRCVFRKTDRGIRIK 362
Query: 318 TTKGRG--GYIRQIVISDAEL------YNINVAFGACGNCGSH---------PDDDFDPD 360
T +GRG G I +I S+ ++ + IN +F C G P D D
Sbjct: 363 TRRGRGSTGIIDEIHASNIKMDKVLTPFTIN-SFYFCDADGKTEYVWSKEKLPVD----D 417
Query: 361 ALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSIN 405
P I I KDI + +A + G+ E + + NI + +
Sbjct: 418 RTPYIGNIYLKDITCNDTQVAAGYMYGLPERKIEKVTMENIYIKFD 463
>gi|395803712|ref|ZP_10482956.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434266|gb|EJG00216.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 492
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 190/410 (46%), Gaps = 68/410 (16%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I +FGAV DGKTLNTLAFQ AI + A GG ++ VP+GK+LTG+ +L S++ L LE
Sbjct: 72 NINDFGAVADGKTLNTLAFQKAI---QECAANGGGRVLVPNGKYLTGAIHLESNVNLHLE 128
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG- 160
A IL S NP + +V + G E+ Y LI ++ +TG GT++GQ
Sbjct: 129 DHAEILFSLNPKDYPIVH---TSWEGTEV--MNYSPLIYAKNKTNIAITGK-GTLNGQAD 182
Query: 161 -SVWWDWFSSQSL------------------------------------NYSRPHLVEFI 183
+ WW W ++ Y RP+ +EF
Sbjct: 183 STNWWIWSGGKNYGWKKGIPSQNDPTNREVLVDMAEKGIPVSERVFGDGRYLRPNFIEFF 242
Query: 184 SSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDC 243
+V ++ +N+P + +HP+ +N+ I ++V++ P G P+ S N+ I +C
Sbjct: 243 ECNTALVKDIKIINSPFWILHPIKTNNMIIDGVTVNS--HGPNNDGCDPEYSQNILIRNC 300
Query: 244 IIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVE 303
G D I++K+G D G P+ ++ ++ + G V GSE+S G++NV VE
Sbjct: 301 TFNTGDDCIAIKAGRDGDGRRVAIPSKNIIVQNCKMIDGHG-GVVIGSEISAGVNNVFVE 359
Query: 304 KIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAELYNIN---VAFGACGNCGSHPDDDF 357
+ DS N I +T RGG I I + + E+ + + N +F
Sbjct: 360 NC-VMDSPNLDRAIRIKTNSRRGGIIENIYVRNLEVGTVKECVLKLNMFYNVYGSQTGNF 418
Query: 358 DPDALPAIDQITFKDIIGTNITIAGNFT----GIQEAPFANICLSNISLS 403
+P I ++ +++ N G ++ G E+P NI L N+ +
Sbjct: 419 ----IPTIRNVSLENVTVKN---GGKYSVWAEGYAESPVENITLKNVKIQ 461
>gi|375100956|ref|ZP_09747219.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661688|gb|EHR61566.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 557
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 194/399 (48%), Gaps = 63/399 (15%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
VSIT+FGA G+ L+T AF++AI + + GG ++ +P+G++LTG+ +L S++ L
Sbjct: 72 EVSITDFGADPTGEHLSTAAFRDAI---EEVSAAGGGRVVIPAGEFLTGAIHLRSNVELH 128
Query: 100 LEKGAVILGSQNPSHWDVVDPLPS-YGR--GIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
+ GAV+ SQNP H+ LP+ Y R G+EL Y I + +V +TG +G +
Sbjct: 129 VGSGAVVRFSQNPDHY-----LPAVYTRWEGVEL--YNYSPFIYARGVENVAITG-SGVL 180
Query: 157 DGQGSV--WWDWFSSQSL------------------------NYSRPHLVEFISSENVVV 190
DGQ WW+W S ++ RP+ V+F S N++V
Sbjct: 181 DGQADEKHWWNWSGSTQAEDRETLFRMGEQGVPVEQRRFGAGHHLRPNFVQFYDSRNILV 240
Query: 191 SNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHD 250
+T N+P + IHPV N+ + + + + PE P G+ P+SS +V I++ G D
Sbjct: 241 QGVTLKNSPMWMIHPVLSHNITVDGVVLDS-PEGPNNDGVNPESSRDVVIKNSRFDNGDD 299
Query: 251 AISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++KSG + G G P+ ++ I +Q G V GSEMSG + NV + ++ DS
Sbjct: 300 CIAIKSGRNADGRRIGVPSENILIENNHMQDGHG-GVVMGSEMSGSVRNVFAQH-NVMDS 357
Query: 311 LN---GIEFRTTKGRGG-----YIRQ--IVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
N + +T RGG Y R +V E+ +N F + G H
Sbjct: 358 PNLHRALRIKTNSVRGGIVENVYFRHNTVVEIGDEVIRVNF-FYEEADSGPH-------- 408
Query: 361 ALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
P + I +D+ N A G + +P +N+ +++
Sbjct: 409 -TPIVRNIHIEDLRSDNGEYALYLRGYERSPVSNVTVTD 446
>gi|423223575|ref|ZP_17210044.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638200|gb|EIY32047.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 532
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 194/430 (45%), Gaps = 64/430 (14%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
VS+ E+G +G+G TLNT AF AI +++GG L VP G WLTG L S++ L
Sbjct: 49 EVSLAEYGGIGNGMTLNTQAFAAAI---ADLSERGGGHLIVPEGIWLTGPIVLKSNIDLH 105
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDN------ 153
+ K A++L + + + + PL S G G R +S I+ Y + +TG+
Sbjct: 106 VLKNAIVLFTPDKTQY----PLLSPDEGTS--GSRCQSPISAYHESNFSITGEGVFDGNG 159
Query: 154 -----------------------GTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVV 190
GT+ G++W+ SS+ L RP +V F+ E V++
Sbjct: 160 ELWRPVKRFKVSNAEWNSFIKTGGTVKQDGAIWYPETSSEKLAKKRPRMVRFVRCERVLL 219
Query: 191 SNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHD 250
+ F N+P+++++ + N+ + I V P + GI S N I +C + G D
Sbjct: 220 QGVVFQNSPSFHVNFILSDNIVVDGIMVRCPWNAQNGDGIDLSSCTNALIVNCAVDAGDD 279
Query: 251 AISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
AI LKSG + G G P ++ I + G V GS+ GGI V V D+
Sbjct: 280 AICLKSGIGDVGRRRG-PCANIIIDNCTVFHGHGGFV-IGSDTGGGIDRVSVRNCRFIDT 337
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQIT- 369
G+ F++ +GRGG + + + + + +I A A + + +PD +P ++T
Sbjct: 338 DTGLRFKSKRGRGGVVSNVYVDNIMMNDI--ANYAIWFDSYYQEKTPEPDGIPEGGEMTD 395
Query: 370 ------------FKDIIGTNITI--AGN---FTGIQEAPFANICLSNISLSINPGSYNSW 412
F+DI +NIT AG F G+ E +N+ L++ + G+
Sbjct: 396 VPFMPVTDDTPCFQDIHISNITCRDAGRAMFFNGLPEMNVSNVSLTDCMIHSVAGAQVDE 455
Query: 413 EC----SNIH 418
C NIH
Sbjct: 456 TCGLRMENIH 465
>gi|257876852|ref|ZP_05656505.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
gi|257811018|gb|EEV39838.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
Length = 438
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 178/363 (49%), Gaps = 25/363 (6%)
Query: 55 LNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSH 114
L T A Q I L +GG ++ +G++ TG+ L S++ L L GA ++ S +P
Sbjct: 16 LLTEAIQEKIDELHQ---QGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKD 72
Query: 115 WDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWF--SSQSL 172
+ VV R + Y S + ++ VTG G +DGQG WW F + + L
Sbjct: 73 YPVV-----VSRWEGVKREVYASCLYAENAENIAVTG-LGMLDGQGQRWWKTFRENREQL 126
Query: 173 NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVP 232
Y RP L+ F S + + + ++ +++P++ ++P+ C ++ I N+ + P +SP T GI P
Sbjct: 127 AYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGIDP 186
Query: 233 DSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSE 292
+S NV I +C I +G D I++KSG ++ ++ I + G +V GSE
Sbjct: 187 ESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCHMLHGHG-AVVLGSE 243
Query: 293 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CG 347
MSG I NV + D+ GI ++ +GRGG I I +++ + N+ F CG
Sbjct: 244 MSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCG 303
Query: 348 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 401
G D + P + P +I F +I N+ A F G+ E ++I +I+
Sbjct: 304 PKGKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIA 363
Query: 402 LSI 404
+S+
Sbjct: 364 VSM 366
>gi|374309036|ref|YP_005055466.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358751046|gb|AEU34436.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 471
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 175/379 (46%), Gaps = 24/379 (6%)
Query: 36 PRPH-SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTS 94
P+P +++ +FGAVGDGKT +TLA Q L + GG +++VP+G++LTG+ L S
Sbjct: 51 PKPVVKLNVRDFGAVGDGKTKDTLALQQT---LDRCSLLGGGEVFVPAGEYLTGALVLRS 107
Query: 95 HLTLFLEKGAVILGSQNPSHWDVVD-PLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDN 153
+ L L+ A +LGS DV D PL + GR K I D G
Sbjct: 108 NTLLRLDGDASLLGSP-----DVADYPLTQ----VRWEGRWIKGYIGFISAMDAENIGIV 158
Query: 154 GTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHI 213
G G+ ++ + P L+EF+S NV V + ++IHP YC N+
Sbjct: 159 GKGKIVGNTAIKGRVERATQFRNPALLEFVSCRNVRVEDCFTSQNDMWSIHPTYCENITF 218
Query: 214 QNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVH 273
+N++VH+ + GI DS +V I+ C D ISLKSG E G RPT DV
Sbjct: 219 KNVTVHSGAD-----GIDVDSCKHVVIDGCDFDTHDDCISLKSGRGEEGYTILRPTEDVQ 273
Query: 274 IRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIRQIVIS 332
I + + GSE SGGI NV+V + I ++ GRG +I I ++
Sbjct: 274 ISNCTFMDHFWACIGIGSETSGGIRNVRVNHCKCLGARTFAIYIKSRPGRGAFIEDISMN 333
Query: 333 DAELYNINVAFGACGNCGSHPDDDF---DPDALPAIDQITFKDIIGTNITIAGNFTGIQE 389
D E+ F S D+F + +P I F +I T++ + + GI
Sbjct: 334 DLEVSGAKQGFLRFNILDSGKQDEFPVPGEEGIPTIRNFHFSNIRVTDMPVLVDGVGIHP 393
Query: 390 A-PFANICLSNISLSINPG 407
+ P L+N++ + G
Sbjct: 394 SKPLEGFSLTNVTGTCGKG 412
>gi|257867957|ref|ZP_05647610.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257874287|ref|ZP_05653940.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
gi|257802040|gb|EEV30943.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257808451|gb|EEV37273.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
Length = 438
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 178/363 (49%), Gaps = 25/363 (6%)
Query: 55 LNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSH 114
L T A Q I L +GG ++ +G++ TG+ L S++ L L GA ++ S +P
Sbjct: 16 LLTEAIQEKIDELHQ---QGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKD 72
Query: 115 WDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWF--SSQSL 172
+ VV R + Y S + ++ VTG G +DGQG WW F + + L
Sbjct: 73 YPVV-----VSRWEGVKREVYASCLYAENAENIAVTG-LGMLDGQGQRWWKTFRENREQL 126
Query: 173 NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVP 232
Y RP L+ F S + + + ++ +++P++ ++P+ C ++ I N+ + P +SP T GI P
Sbjct: 127 AYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGIDP 186
Query: 233 DSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSE 292
+S NV I +C I +G D I++KSG ++ ++ I + G +V GSE
Sbjct: 187 ESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCHMLHGHG-AVVLGSE 243
Query: 293 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA-----CG 347
MSG I NV + D+ GI ++ +GRGG I I +++ + N+ F CG
Sbjct: 244 MSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCG 303
Query: 348 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 401
G D + P + P +I F +I N+ A F G+ E ++I +I+
Sbjct: 304 PKGKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIA 363
Query: 402 LSI 404
+S+
Sbjct: 364 VSM 366
>gi|381180485|ref|ZP_09889325.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
gi|380767666|gb|EIC01665.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
Length = 453
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 158/333 (47%), Gaps = 43/333 (12%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V I +FG GDGK N+ AF A + GG +L VP G W +G + S TL
Sbjct: 2 KEVKIDDFGGKGDGKFNNSNAFALA---FAEISRNGGGKLTVPKGVWASGPIEIPSDTTL 58
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LE+G+ I +P+ + P+ + G+E L+ ++V +TG GT++G
Sbjct: 59 ELEEGSEISFIPDPNLYT---PVFTRWEGVEC--FAMHPLVLSSHTKNVRITG-KGTLNG 112
Query: 159 QGSVWWDWFSSQS---------------------------------LNYSRPHLVEFISS 185
G WW+ ++ + + RP L+E +
Sbjct: 113 NGETWWNLKKAKKERGQSAPEDMYEKILAELNPGYENQPGGGGGREIQFLRPSLLEISFA 172
Query: 186 ENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCII 245
ENV V + ++P + +HP+Y N+ ++ I + P +P T GI DS +NV IEDC +
Sbjct: 173 ENVSVEGIEIKDSPFWTVHPLYVKNLTLRGIKIDNPYTAPNTDGIDVDSCENVVIEDCFV 232
Query: 246 AMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKI 305
++G D I +KSG GI +PT +V IR ++++ G + GSE + G+S++
Sbjct: 233 SVGDDGICIKSGSGPDGIRCAKPTVNVEIRNCTVRNAHG-GIVIGSETAAGMSHIHAVGC 291
Query: 306 HLYDSLNGIEFRTTKGRGGYIRQIVISDAELYN 338
L + GI ++ +GRGG I I + D + N
Sbjct: 292 DLSGTDRGIRIKSRRGRGGDIFDIELRDMVMNN 324
>gi|383114440|ref|ZP_09935204.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
gi|382948584|gb|EIC71811.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
Length = 529
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 198/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA GDG LNT A +AI K +GG ++ +P G WLTG L S++ L
Sbjct: 48 YEVNIEKFGAKGDGLFLNTKAINDAI---KDVNQRGGGKVIIPEGVWLTGPIELLSNVNL 104
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ A++L + N + ++ + G+E RR +S I+ ++ +TG +GT DG
Sbjct: 105 YTEQNALVLFTGNFEAYPII---ATSFEGLET--RRCQSPISARNAENIAITG-HGTFDG 158
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W W+ + + +N
Sbjct: 159 NGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTD 218
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ + S+ V++ +TF N+P++ +HP+ C + + NI V P S
Sbjct: 219 EEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQ 278
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
I +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 279 NGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGG 338
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 339 FVV-GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLL 397
Query: 339 INVAFGACGNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G ++D AI +T F++I +NI G+ F G+
Sbjct: 398 FDLFYGGKG-AGEESEEDLLSRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 456
Query: 389 EAPFANICLSNISLS 403
E P +NI + N+ ++
Sbjct: 457 EMPISNITVKNVVMT 471
>gi|217073342|gb|ACJ85030.1| unknown [Medicago truncatula]
Length = 137
Score = 147 bits (371), Expect = 1e-32, Method: Composition-based stats.
Identities = 76/119 (63%), Positives = 89/119 (74%), Gaps = 3/119 (2%)
Query: 5 VALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAI 64
V L+L L CS+ + S C + RPHSVSITEFGAVGDG TLNT AFQNAI
Sbjct: 10 VFLVLALFCCSSWKV---WSSTLCKETNLDKVRPHSVSITEFGAVGDGITLNTKAFQNAI 66
Query: 65 FYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPS 123
FYL SF+DKGGA+L+VP+G+WLTGSF+L SHLTL+L+K A+ILGS N W VVDPLPS
Sbjct: 67 FYLNSFSDKGGAKLFVPAGRWLTGSFDLISHLTLWLDKDAIILGSTNSEDWPVVDPLPS 125
>gi|153807509|ref|ZP_01960177.1| hypothetical protein BACCAC_01789 [Bacteroides caccae ATCC 43185]
gi|149129871|gb|EDM21083.1| polygalacturonase (pectinase) [Bacteroides caccae ATCC 43185]
Length = 539
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 200/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA GDG LNT A +AI K +GG ++ +P G WLTG L S++ L
Sbjct: 58 YEVNIEKFGAKGDGLFLNTKAINDAI---KDVNQRGGGKVIIPEGIWLTGPIELLSNVNL 114
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ A++L + + + ++D + G+E RR +S I+ ++ VTG GT DG
Sbjct: 115 YTEQNALVLFTGDFEAYPIID---TSFEGLET--RRCQSPISARNAENIAVTG-YGTFDG 168
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W W+ + + +N
Sbjct: 169 NGDCWRPVKKEKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTD 228
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ + S+ V++ +TF N+P++ +HP+ C + + NI V P S
Sbjct: 229 EEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQ 288
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
I +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 289 NGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGG 348
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 349 FVV-GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLL 407
Query: 339 INVAFGACGNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G ++D A+P + + T F++I +NI G+ F G+
Sbjct: 408 FDLFYGGKG-AGEESEEDLLNRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 466
Query: 389 EAPFANICLSNISLS 403
E P +N+ + N+ ++
Sbjct: 467 EMPISNVTVKNVVMT 481
>gi|336251837|ref|YP_004585805.1| Polygalacturonase [Halopiger xanaduensis SH-6]
gi|335339761|gb|AEH38999.1| Polygalacturonase [Halopiger xanaduensis SH-6]
Length = 516
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 173/395 (43%), Gaps = 39/395 (9%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
P I E+GA+ D T A Q A L A+ GG +YVP+G++ TG +
Sbjct: 4 PDTDRFDIREYGAISDSDDPATDAIQTA---LDECAETGGT-VYVPAGRFRTGPLRIGDR 59
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
TL L+ GA + + +D + S G G + + +V ++G GT
Sbjct: 60 TTLHLDPGATLTFVGD---YDAFPTVESRWEGWNQYG--FHPCLWVTDAENVEISG-RGT 113
Query: 156 IDGQGSVWWDWFSSQSLNYS-------------------------RPHLVEFISSENVVV 190
IDG G WW ++ + RP L + SENV V
Sbjct: 114 IDGNGQYWWQFYGADDDELPEGLRERLAEFNGKNDKADDVSSFTLRPPLFQISESENVTV 173
Query: 191 SNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPE-SPYTVGIVPDSSDNVCIEDCIIAMGH 249
S +T N+P +N H VY NV I +++V P E +P GI DSS V I D I G
Sbjct: 174 SGVTLQNSPFWNTHVVYSENVTISDVNVLNPAEGAPNGDGIDIDSSRYVRISDAYINAGD 233
Query: 250 DAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYD 309
DAI +KSG + G G P + + + +++ G V GSEMSG + +V V D
Sbjct: 234 DAICIKSGKNAEGREVGEPASQITVTNCTVEAGHG-GVVIGSEMSGDVRDVAVTNCTFTD 292
Query: 310 SLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP--DALPAIDQ 367
+ G+ +T + RGG + + + + I F G + D + +P + P +
Sbjct: 293 TDRGVRIKTQRDRGGVVEDLRFDNIVMRRIASPFTINGYYFTPLDSEPEPVDEGTPMVRN 352
Query: 368 ITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 402
+TF +I N+ AG F G+ E F I N+ +
Sbjct: 353 VTFSNITARNVETAGFFAGLPEQYFEGIEFDNVRI 387
>gi|284036172|ref|YP_003386102.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283815465|gb|ADB37303.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 544
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 167/351 (47%), Gaps = 58/351 (16%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R +++I++ GAV DG TLNT A AI GG + VP G WLTG L S++
Sbjct: 35 RKDTIAISKLGAVADGLTLNTAAINKAI---DQCTKAGGGVVLVPRGLWLTGPVTLKSNV 91
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
L L KGA++ Q + +V + + G E R ++ I+G L ++ +TG+ G +
Sbjct: 92 NLHLAKGALL---QFTNRREVYPLINTTWEGEE--AIRNQAPISGVGLENIAITGE-GIL 145
Query: 157 DGQGSVW------------WD---------------WF-SSQSL---------------- 172
DG G W W W+ ++QSL
Sbjct: 146 DGAGEAWRMVKKGKLTSDQWKKLVASGGVLNDKQDTWYPTAQSLKGASEPVKAGQPMTYY 205
Query: 173 ----NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTV 228
++ RP+++ + +++ +TF N+PA+ +HP+ C ++ ++ ++ P +
Sbjct: 206 EGIKDFLRPNMLSLTRCKRILLEGVTFQNSPAWCLHPLLCEDITLRRVTAKNPWYAQNGD 265
Query: 229 GIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 288
G+ +S N ++DC +G D I +KSG DE G G PT ++ +R + + G V
Sbjct: 266 GLDLESCRNGLVDDCTFDVGDDGICIKSGRDEQGRKRGVPTENITVRNSRVYHAHGGFV- 324
Query: 289 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI 339
GSEMSGG+ N+ V + G+ F+T +GRGG + I + ++ +I
Sbjct: 325 IGSEMSGGVKNLYVSNCTFMGTDVGLRFKTARGRGGVVENIFVDGIDMTDI 375
>gi|423216971|ref|ZP_17203467.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
gi|392629501|gb|EIY23508.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
Length = 539
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 200/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA GDG LNT A +AI K +GG ++ +P G WLTG L S++ L
Sbjct: 58 YEVNIEKFGAKGDGLFLNTKAINDAI---KDVNQRGGGKVIIPEGIWLTGPIELLSNVNL 114
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ A++L + + + ++D + G+E RR +S I+ ++ +TG GT DG
Sbjct: 115 YTEQNALVLFTGDFEAYPIID---TSFEGLET--RRCQSPISARNAENIAITG-YGTFDG 168
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W W+ + + +N
Sbjct: 169 NGDCWRPVKKEKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTD 228
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ + S+ V++ +TF N+P++ +HP+ C + + NI V P S
Sbjct: 229 EEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQ 288
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
I +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 289 NGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGG 348
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 349 FVV-GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLL 407
Query: 339 INVAFGACGNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G ++D A+P + + T F++I +NI G+ F G+
Sbjct: 408 FDLFYGGKG-AGEESEEDLLNRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 466
Query: 389 EAPFANICLSNISLS 403
E P +N+ + N+ ++
Sbjct: 467 EMPISNVTVKNVVMT 481
>gi|322434842|ref|YP_004217054.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321162569|gb|ADW68274.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 478
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 32/328 (9%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+V + +FGA GDG T++T A Q AI + A G ++ P G +L+GS + S +TL
Sbjct: 26 TVKVNDFGAKGDGSTMDTAAIQKAI---DAAAKSHGTVVFAP-GTYLSGSIFVKSGVTLQ 81
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIEL--PGRRYKSLINGYMLRDVVVTGDNGTID 157
L+KG ILGSQ + V +P+ GIE+ P +L+N Y +D V+TG+ GTID
Sbjct: 82 LDKGVTILGSQRIEDYPV---MPTRVAGIEMSWPA----ALVNVYEQKDAVITGE-GTID 133
Query: 158 GQGSVWWDWFSSQSLNYS-------------RPHLVEFISSENVVVSNLTFLNAPAY-NI 203
G G ++WD + + Y RP LV+ +S ++ + L + +
Sbjct: 134 GDGKIYWDSYWTLRKGYEPRGLRWASDYDARRPRLVQVFNSSHIKIGGGLLLRRSGFWTL 193
Query: 204 HPVYCSNVHIQNISVH--APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEY 261
H Y ++V +++ P T GI DSS ++ + IA+ DA+ LK+G D
Sbjct: 194 HICYSTDVTADGLTIRNNEGGRGPSTDGIDIDSSKHIVVAHADIAVNDDALCLKAGRDSD 253
Query: 262 GIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN-GIEFRTTK 320
G+ RPT DV +R ++ + + V FGSE SGG N++ + ++ + GI F++
Sbjct: 254 GLRVNRPTEDVVLRDSTIRDGA-AGVTFGSETSGGFRNIEAYNLKVFGHVPVGILFKSAH 312
Query: 321 GRGGYIRQIVISDAELYNINVAFGACGN 348
RGG+ + I D L +I V N
Sbjct: 313 TRGGFAENVRIHDLTLTDIPVVLKVTMN 340
>gi|386819253|ref|ZP_10106469.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424359|gb|EIJ38189.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 468
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 193/409 (47%), Gaps = 65/409 (15%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I ++GAV DG+T N+ A ++AI K+ D GG ++ VP GK++TG +L S++ LE
Sbjct: 52 NIKDYGAVNDGETNNSKAIKDAI---KACNDAGGGKVIVPKGKYVTGPIHLLSNVNFHLE 108
Query: 102 KGAVILGSQNPSHWDVVDPLP----SYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
+GA IL +++ + LP SY G+EL Y LI Y +++ VTG GT +
Sbjct: 109 EGAEILFTKDKKAY-----LPVVHTSY-EGVEL--MNYSPLIYAYKQKNIAVTG-KGTFN 159
Query: 158 GQGSV--WWDWFSSQSLNY------------------------------------SRPHL 179
GQ WW W ++ + RP
Sbjct: 160 GQAGKDNWWPWCGAERYGHIEGEPQQKDSVNLPRLRKMNEAGTPVAERVFGEGYQLRPTF 219
Query: 180 VEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVC 239
E EN++V ++TF NAP + +HP+ N+ + ++V + P G P+ S NV
Sbjct: 220 FEPFECENILVKDVTFTNAPFWVMHPIKSVNITVDGVTVRS--HGPNNDGCDPEYSKNVH 277
Query: 240 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 299
I++C+ G D I++KSG ++ G P+ ++ + ++ G V GSE+S G+ N
Sbjct: 278 IKNCLFDTGDDCIAIKSGRNDDGRRVNIPSENIVVENCEMKDGHG-GVVMGSEISAGVRN 336
Query: 300 VQVEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGACG-NCGSHPDD 355
V V + DS N I +T RGG++ + + + E+ + AF + G + +
Sbjct: 337 VYVRNCKM-DSPNLDRAIRIKTNTLRGGFVENVFVKNIEVGQVKEAFLKVNTHYGIYANQ 395
Query: 356 DFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEA-PFANICLSNISLS 403
+ D +P+I I +D+ N G +EA P NI N+ ++
Sbjct: 396 --EGDYMPSIKNIHIEDVKVDNGGKYGILVRGREALPVKNITFKNVVIN 442
>gi|299148436|ref|ZP_07041498.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513197|gb|EFI37084.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 518
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 199/436 (45%), Gaps = 77/436 (17%)
Query: 32 PTLDPRP----HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLT 87
PT++ RP + V+I +FGA DG TLNT A NAI K DKGG ++ +P G WLT
Sbjct: 40 PTIE-RPVFPDYQVNICDFGAKSDGVTLNTEAINNAI---KVVHDKGGGKVVIPEGLWLT 95
Query: 88 GSFNLTSHLTLFLEKGAVILGSQNPSHWDVV-------------DPLPSY--------GR 126
G L S++ L EK A+I+ S + S + ++ P+ + G
Sbjct: 96 GPIVLQSNVNLHAEKNALIVFSSDTSLYPIITTSFEGLDAKRCQSPISAMNAENIAITGY 155
Query: 127 GI-ELPGRRYKSLINGYML----RDVVVTGDNGTIDGQGSVWW----------------- 164
G+ + G R++ + M +++V +G G +D G VW+
Sbjct: 156 GVFDGAGDRWRPVKKDKMTDRQWKNLVNSG--GKVDENGKVWYPNEGALKASVLMAGSGD 213
Query: 165 --------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
+W +S + RP L+ + S+ +++ +TF N+P++ +HP+ C ++ + ++
Sbjct: 214 KRTEITSEEWEDMKS--WLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDV 271
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
V P S + +S NV I +C G DAI LKSG DE G G P ++ +R
Sbjct: 272 KVFNPWYSQNGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRN 331
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR--------- 327
+ G V GSEMSGG+ NV V + + G+ F++ +GRGG +
Sbjct: 332 NTVLHGHGGFV-IGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINM 390
Query: 328 QIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGI 387
+ +DA + ++ + A + S P + PA I D+ A G+
Sbjct: 391 IDIPNDALIADL---YYAAKSAPSEPVPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGL 446
Query: 388 QEAPFANICLSNISLS 403
E P NI + N+ ++
Sbjct: 447 PEMPIENISIKNMVVT 462
>gi|413925950|gb|AFW65882.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 163
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 86/114 (75%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RP +SI +FG VGDG+TLNT AF+ A++ ++ +GG L+VP+G WL GSFNLTSH+
Sbjct: 46 RPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHM 105
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
TLFL +GAV+ +Q+ W +V+PLPSYGRG ELPG RY S I+G LRDVV+T
Sbjct: 106 TLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVIT 159
>gi|346224313|ref|ZP_08845455.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 572
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 198/441 (44%), Gaps = 86/441 (19%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
++VSI +FGAVGDG N+ AF AI + ++KGG ++ VP G WLTG + S++ L
Sbjct: 61 YAVSIVDFGAVGDGVFDNSDAFAQAI---DNVSEKGGGRVVVPRGLWLTGPIIMKSNIDL 117
Query: 99 FLEKGAVILGSQNPSHWDVVDP----LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
LE GAV+ S + + ++D L +Y R S ++ + L ++ TG NG
Sbjct: 118 HLEDGAVVHFSSDFDDYPLIDTSFEGLNTY---------RCMSPVHAHGLENIAFTG-NG 167
Query: 155 TIDGQGSVW------------WD---------------WFSSQS---------------- 171
DG G W W W+ S+
Sbjct: 168 IFDGNGDAWRPVKKSKMTESQWKKLVNSGGVLSDDGEIWYPSEKSKAGDSRDNFNVPDLK 227
Query: 172 --------LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPE 223
++ RP +V + V++ TF N+PA+NIHP+ ++ I+N++V P
Sbjct: 228 TKEDFEKIKDFLRPVMVSIKGCKQVLLDGPTFQNSPAWNIHPLMSRDIIIRNLTVRNPWY 287
Query: 224 SPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSS 283
S G+ +S NV I + +G DAI KSG +E G G PT +V ++ ++
Sbjct: 288 SQNGDGLDLESCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGVPTENVIVKNNVVYHGH 347
Query: 284 GSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI---- 339
G V GSEMSGG+ NV V + G+ F++T+GRGG + I I + ++ +I
Sbjct: 348 GGFV-IGSEMSGGVRNVHVANCTFIGTDVGLRFKSTRGRGGVVENIYIFNIDMIDIPTEP 406
Query: 340 ---NVAFGA----CGNCGSHPDDDFDPDALPAIDQI-TFKDIIGTNITI-----AGNFTG 386
N+ +G + G+ + +P ++ +F++I NI A F G
Sbjct: 407 IRFNLFYGGNAPLLDDGGNSVPSGKEAKPVPVTEETPSFRNIFMKNIRANGFGNAAFFMG 466
Query: 387 IQEAPFANICLSNISLSINPG 407
+ E NI L N L G
Sbjct: 467 LPEMNLQNIHLENAVLRATRG 487
>gi|372281193|ref|ZP_09517229.1| polygalacturonase-like protein [Oceanicola sp. S124]
Length = 861
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 162/356 (45%), Gaps = 24/356 (6%)
Query: 75 GAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIE----L 130
G L VP G++ L + +TL+LE+GA + + + W ++ P GR I L
Sbjct: 111 GGTLRVPPGRFAISPVFLKARMTLWLEEGAELCALHDRAGWPILPPRDDAGRVIGTWEGL 170
Query: 131 PGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WWDWFSSQSLNYSRPHLVEFISSENV 188
P + + + + +TG G +D G WW W RP + + V
Sbjct: 171 PEAAFAAPLTAIDCDGLTITG-LGILDAGGDRGDWWSWPKETRAGARRPRALFLAHGQGV 229
Query: 189 VVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMG 248
+S +T N+P++ +HP + + + PP+SP T G+ P+S +V + ++G
Sbjct: 230 QLSGITVRNSPSWTVHPYRIDGLTCAGLKIQNPPDSPNTDGLNPESCTDVTLAGIHFSVG 289
Query: 249 HDAISLKSGWDEYGIAYG-----RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVE 303
D I++KSG G G PT +H+ L++ G V GSEMSG I++V V
Sbjct: 290 DDCIAVKSGKRGTGALKGLAGHLAPTRRLHVHHCLMERGHGGMV-LGSEMSGDITDVTVT 348
Query: 304 KIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINV-----AFGACGNCGSHPD-DDF 357
+ G+ +T +GRGG + ++ SD + + AF C G P+
Sbjct: 349 ACEFIGTDRGLRIKTRRGRGGEVARVHFSDVLMQGVGTPLAINAFYYCDPDGRSPEVQSR 408
Query: 358 DP----DALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSNISLSINPGS 408
P + P I ITF D+I T++ + A G+ EAP + L N S++P +
Sbjct: 409 SPAPVDETTPKIHDITFSDVIATDVPVCAVAVLGLPEAPVTGVRLKNFRASLDPSA 464
>gi|423294962|ref|ZP_17273089.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
gi|392674542|gb|EIY67988.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
Length = 529
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 198/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA GDG LNT A +AI K +GG ++ +P G WLTG L S++ L
Sbjct: 48 YEVNIEKFGAKGDGLFLNTKAINDAI---KDVNQRGGGKVIIPEGVWLTGPIELLSNVNL 104
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ A++L + + + ++ + G+E RR +S I+ ++ +TG +GT DG
Sbjct: 105 YTEQNALVLFTGDFEAYPII---ATSFEGLET--RRCQSPISARNAENIAITG-HGTFDG 158
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W W+ + + +N
Sbjct: 159 NGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTD 218
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ + S+ V++ +TF N+P++ +HP+ C + + NI V P S
Sbjct: 219 EEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQ 278
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
I +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 279 NGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGG 338
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 339 FVV-GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLL 397
Query: 339 INVAFGACGNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G ++D AI +T F++I +NI G+ F G+
Sbjct: 398 FDLFYGGKG-AGEESEEDLLSRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 456
Query: 389 EAPFANICLSNISLS 403
E P +NI + N+ ++
Sbjct: 457 EMPISNITVKNVVMT 471
>gi|431798726|ref|YP_007225630.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789491|gb|AGA79620.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 475
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 161/334 (48%), Gaps = 51/334 (15%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
SI E+GA G+ L+T A AI K+ + GG ++ VP G +LTG+ +L S++ L
Sbjct: 57 QEFSIEEYGAEAGGEVLSTDAIAAAI---KACNEAGGGRVVVPKGVYLTGAVHLLSNVNL 113
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LE+GA + S+NP D + + S G+EL Y I Y ++ +TG NGT+DG
Sbjct: 114 HLEEGATLRFSRNPK--DYLPLVRSRWEGMEL--MNYSPFIYAYQQENIAITG-NGTLDG 168
Query: 159 QGSV--WWDWFSSQSL----------------------------------NYSRPHLVEF 182
+ WW W ++ ++ RP V+
Sbjct: 169 HADMEHWWPWCGAKHFGWKEGMGRQNPSRKLLHEMVHDRVPLEERIFGEGHFMRPQFVQP 228
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
+NV++ ++ +NAP +N+HPV C NV ++ + + P G P++ NV I+D
Sbjct: 229 FECKNVLIQDVKLINAPMWNLHPVLCENVTVERVKIETL--GPNNDGCDPEACKNVLIKD 286
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQV 302
C G D I++KSG +E G G P+ ++ I ++ G V GSE+SGG NV
Sbjct: 287 CYFDTGDDCIAIKSGRNEDGRIPGIPSENIIIEGCEMKEGHG-GVVIGSEISGGARNVFA 345
Query: 303 EKIHLYDSLN---GIEFRTTKGRGGYIRQIVISD 333
+ + + DS N + +T+ RGG + I + D
Sbjct: 346 QNL-VMDSPNLDRVLRIKTSSKRGGTVENIYMRD 378
>gi|336415491|ref|ZP_08595830.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
gi|335940370|gb|EGN02237.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
Length = 524
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 199/436 (45%), Gaps = 77/436 (17%)
Query: 32 PTLDPRP----HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLT 87
PT++ RP + V+I +FGA DG TLNT A NAI K DKGG ++ +P G WLT
Sbjct: 46 PTIE-RPVFPDYQVNICDFGAKSDGVTLNTEAINNAI---KVVHDKGGGKVVIPEGLWLT 101
Query: 88 GSFNLTSHLTLFLEKGAVILGSQNPSHWDVV-------------DPLPSY--------GR 126
G L S++ L EK A+I+ S + S + ++ P+ + G
Sbjct: 102 GPIVLQSNVNLHAEKNALIVFSSDTSLYPIITTSFEGLDAKRCQSPISAMNAENIAITGY 161
Query: 127 GI-ELPGRRYKSLINGYML----RDVVVTGDNGTIDGQGSVWW----------------- 164
G+ + G R++ + M +++V +G G +D G VW+
Sbjct: 162 GVFDGAGDRWRPVKKDKMTDRQWKNLVNSG--GKVDENGKVWYPNEGALKASVLMAGSGD 219
Query: 165 --------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
+W +S + RP L+ + S+ +++ +TF N+P++ +HP+ C ++ + ++
Sbjct: 220 KRTEITSEEWEDMKS--WLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDV 277
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
V P S + +S NV I +C G DAI LKSG DE G G P ++ +R
Sbjct: 278 KVFNPWYSQNGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRN 337
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR--------- 327
+ G V GSEMSGG+ NV V + + G+ F++ +GRGG +
Sbjct: 338 NTVLHGHGGFV-IGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINM 396
Query: 328 QIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGI 387
+ +DA + ++ + A + S P + PA I D+ A G+
Sbjct: 397 IDIPNDALIADL---YYAAKSAPSEPVPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGL 452
Query: 388 QEAPFANICLSNISLS 403
E P NI + N+ ++
Sbjct: 453 PEMPIENISIKNMVVT 468
>gi|299148526|ref|ZP_07041588.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513287|gb|EFI37174.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 539
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 198/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA GDG LNT A +AI K +GG ++ +P G WLTG L S++ L
Sbjct: 58 YEVNIEKFGAKGDGLFLNTKAINDAI---KDVNQRGGGKVIIPEGVWLTGPIELLSNVNL 114
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ A++L + + + ++ + G+E RR +S I+ ++ +TG +GT DG
Sbjct: 115 YTEQNALVLFTGDFEAYPII---ATSFEGLET--RRCQSPISARNAENIAITG-HGTFDG 168
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W W+ + + +N
Sbjct: 169 NGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACKDFNVPEGINTD 228
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ + S+ V++ +TF N+P++ +HP+ C + + NI V P S
Sbjct: 229 EEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQ 288
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
I +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 289 NGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGG 348
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 349 FVV-GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLL 407
Query: 339 INVAFGACGNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G ++D AI +T F++I +NI G+ F G+
Sbjct: 408 FDLFYGGKG-AGEESEEDLLSRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 466
Query: 389 EAPFANICLSNISLS 403
E P +NI + N+ ++
Sbjct: 467 EMPISNITVKNVVMT 481
>gi|433424436|ref|ZP_20406465.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
gi|432198085|gb|ELK54408.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
Length = 519
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 176/387 (45%), Gaps = 38/387 (9%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++ ++G + D +L+T A Q A L A +GG ++Y+P G + + + T L
Sbjct: 7 NVRDYG-IDDDDSLDTAAIQAA---LDDCAGEGG-EVYLPPGTYRSAPLRVGDDTTFRLA 61
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GA + Q+ + + V+ S G + G + ++ +V +TG+ G IDG GS
Sbjct: 62 NGAELRFVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADAENVTITGE-GVIDGGGS 115
Query: 162 VWWDWFSSQSLNYS------------------------RPHLVEFISSENVVVSNLTFLN 197
WW++ S Y RP L++ ENV VS +T N
Sbjct: 116 YWWEFVSLPPEQYPSELTERLEEIRRGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRN 175
Query: 198 APAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSG 257
+P +N H VY +V I ++S+ PP++P GI DSS V + D I G DAI LKSG
Sbjct: 176 SPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSG 235
Query: 258 WDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFR 317
DE G GRPT +V + ++ G V GSE +G + +V V D+ GI +
Sbjct: 236 KDEQGREVGRPTENVVVTNCTVEHGHG-GVVIGSETAGDVRHVTVTNCTFTDTDRGIRIK 294
Query: 318 TTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIG 375
+ +GRGG + + + + F G + D D +P +A P + + F I
Sbjct: 295 SKRGRGGTVEDLRFDTIAMRRVACPFVINGYYQTDIDSDPEPVTEATPNVRNVDFHHITA 354
Query: 376 TNITIAGNFTGIQEAPFANICLSNISL 402
+ A G+ E F I +++ +
Sbjct: 355 EEVESAAFLAGLPEQRFEGISFTDVDI 381
>gi|393786780|ref|ZP_10374912.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
gi|392658015|gb|EIY51645.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
Length = 536
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 199/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+++SI FGA DGK LNT A AI K+ KGG ++ +P G WLTG L S++ L
Sbjct: 55 YTISIVAFGAQNDGKFLNTKAINEAI---KAVHAKGGGKVVIPEGLWLTGPIELLSNVNL 111
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ A+IL + + + +++ + G+E RR +S I+ ++ +TG GT DG
Sbjct: 112 YTERNAMILFTDDFEAYPIIE---TSFEGLET--RRCQSPISARNAENIAITG-YGTFDG 165
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W W+ + + +N
Sbjct: 166 SGDSWRPVKRDKLTVSQWSKLVKSGGVTDAAGKIWYPTAGALKGALACKDFNVPEGINTD 225
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ + S+ V++ +TF N+P++ +HP+ C ++ I N+ V P S
Sbjct: 226 EEWDEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPWYSQ 285
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
+ +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 286 NGDALDLESCKNALIINSLFDAGDDAICIKSGKDEDGRRRGEPCQNVLVKNNTVLHGHGG 345
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ V + G+ F++T+GRGG + ++ E
Sbjct: 346 FVV-GSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYINNINMINIPNEPLL 404
Query: 339 INVAFGACGNCGSHPDDDFDPDA---LPAIDQIT--FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G +++ + LP + + T FKDI TN+ G+ F G+
Sbjct: 405 FDLFYGGKGP-GEETEEERAANTKTDLPPVTEETPAFKDIHITNVNCKGSGRAMFFNGLP 463
Query: 389 EAPFANICLSNISLS 403
E P NI + N+ ++
Sbjct: 464 EMPIRNITVKNVVIT 478
>gi|374374281|ref|ZP_09631940.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233723|gb|EHP53517.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 465
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 188/409 (45%), Gaps = 44/409 (10%)
Query: 26 GQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW 85
G C + + IT FGAV + NT A AI GG + +P G+W
Sbjct: 48 GNCKINTPDFSKSKKLVITGFGAVPGDQQKNTAAIARAIATANKL---GGGIVVIPKGEW 104
Query: 86 LTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLR 145
LTG +L S++ L LEKGA +L S NP D + + S G+E Y LI Y +
Sbjct: 105 LTGKIHLKSNVNLHLEKGATLLFSGNPQ--DYLPAVVSSWEGMEC--YNYSPLIYVYECK 160
Query: 146 DVVVTGDNGTIDGQGSVWWDWFSS------------------------QSLN---YSRPH 178
+V +TG+ GT+ Q + W WF+ Q +N + RP
Sbjct: 161 NVAITGE-GTLKAQMATWEKWFARPRAHMESIKRLYNLAWNRAPLEQRQMVNDTAHLRPQ 219
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
++F SEN+++ ++ +N+P + IH N+ ++N++V+A + G+ P+ S NV
Sbjct: 220 FIQFNRSENILLEGVSVVNSPFWTIHLYLSKNIRLRNLNVYAHGHN--NDGVDPEMSQNV 277
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
IE+C+ G DAI++KSG + G P+ ++ IR +++ VA GSE+SGGI
Sbjct: 278 LIENCVFDQGDDAIAIKSGRNPEGWRLKTPSKNIVIRNCTVKNGH-QLVAIGSELSGGIE 336
Query: 299 NVQVEKIHLYD--SLNGIEFRTTKGR-GGYIRQIVISDAELYNINVAFGACGNCGSHPDD 355
NV ++ + D LN + F T R GGY++ I S+ I++ +
Sbjct: 337 NVFIDHCTVLDGAKLNHLLFIKTNERMGGYVKNIYASNIRSGKIDLGILGIETDVLYQWR 396
Query: 356 DFDP---DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS 401
D P L I I +I + + G + P + L N++
Sbjct: 397 DLVPTYEKRLTPIKDIFLTNIHASEVKFIARVLGQKALPVETVSLKNVT 445
>gi|373955264|ref|ZP_09615224.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373891864|gb|EHQ27761.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 549
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 180/361 (49%), Gaps = 64/361 (17%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
QP + + +I +F A GDG TLNT + +AI S ++KGG + VP G WLTG
Sbjct: 32 QPAF--KTDTFNIKQFDAKGDGLTLNTNSINDAI---TSCSEKGGGVVLVPGGVWLTGPI 86
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
+L S++ L +++ ++L +++ + + +V+ G LP R KS I+G L+++ +T
Sbjct: 87 DLKSNVNLHIDRDGILLFTKDFNQYPIVE-----GSYEGLPAGRCKSPISGKDLQNIAIT 141
Query: 151 GDNGTIDGQGSVW------------WD---------------WFSSQS------------ 171
G G IDG G W W W+ ++
Sbjct: 142 G-TGIIDGNGDAWRMVKKDKLTATQWQDKIASGGLLSADKKTWYPTEKSLKGSQAKDPGI 200
Query: 172 -------------LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISV 218
++ RP++V + + +++ +TF N+PA+N+HP CS++ ++ ++V
Sbjct: 201 LKEGRSIQDFEVYKDFLRPNMVVLNNCKRILLEGVTFQNSPAWNLHPFLCSDLTLRGVNV 260
Query: 219 HAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVL 278
P + GI +SS N IE+ +G D I +KSG DE G G+PT +V +R +
Sbjct: 261 KNPWYAQNGDGIDLESSTNTLIENSTFDVGDDGICIKSGRDEAGRKLGKPTENVIVRNCV 320
Query: 279 LQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYN 338
+ + G V GSEMSGG N+ V + G+ F+TT+GRGG ++ I +++ + +
Sbjct: 321 VYHAHGGFV-IGSEMSGGAKNIFVYNCSFLGTDVGLRFKTTRGRGGVVQNIYVTNINMKD 379
Query: 339 I 339
I
Sbjct: 380 I 380
>gi|332715898|ref|YP_004443364.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
gi|325062583|gb|ADY66273.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
Length = 531
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 169/375 (45%), Gaps = 36/375 (9%)
Query: 52 GKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQN 111
G N A + A+ + + G L +G W L S +T L +GAV+
Sbjct: 109 GARANARALEEAVAAVPA-----GGTLQFAAGLWTAFPVRLKSDMTFHLAEGAVLRAPST 163
Query: 112 PSHWDVVDPLPSYGRGIE----LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WWD 165
+ W ++ GR + LP + + ++ ++V+ G G +DG G WW
Sbjct: 164 RNGWPILPARDETGRMLGSWEGLPDACFAAPVHAIGADNLVIEG-TGVLDGSGDRGDWWS 222
Query: 166 WFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
W RP + +S NV + T NAP++ +HP C + +++ AP SP
Sbjct: 223 WPKETRDGARRPRGLHLVSCRNVGLFGFTIRNAPSWTVHPQGCETLKAAGLTISAPHNSP 282
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGW-----DEYGIAYGRPTTDVHIRRVLLQ 280
T G P+S NV I ++G D I++K+G ++ +A T V +R L++
Sbjct: 283 NTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAE---TRGVSVRHCLME 339
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN 340
G V GSEMSGG+ +V VE + + G+ +T +GRGG + I + L ++
Sbjct: 340 RGHGGLV-IGSEMSGGVHDVTVEDCDMVGTDRGLRLKTRRGRGGSVSNITMRRVLLDGVH 398
Query: 341 VAFGACGNCGSHPDDD--------FDP----DALPAIDQITFKDIIGTNIT-IAGNFTGI 387
A A N H D D DP D P ID IT +D+ ++ AG F G+
Sbjct: 399 TALSA--NAHYHCDADGHDGWVQSRDPAPVDDGTPFIDGITVEDVEIRHLAHAAGVFLGL 456
Query: 388 QEAPFANICLSNISL 402
EAP NI + N+++
Sbjct: 457 PEAPIRNIAIRNLTI 471
>gi|359414685|ref|ZP_09207150.1| Polygalacturonase [Clostridium sp. DL-VIII]
gi|357173569|gb|EHJ01744.1| Polygalacturonase [Clostridium sp. DL-VIII]
Length = 487
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 189/391 (48%), Gaps = 33/391 (8%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ +++ +FGA GDG L+T A Q +I A ++ VP G++L L S++T+
Sbjct: 54 YVLNVKDFGAKGDGLELDTAAVQASIA-----ACPLHGRIIVPKGRYLLTPIFLKSNITI 108
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIEL--------PGRRYKSLINGYMLRDVVVT 150
LE+GAV+LG+Q+ + + ++ L E P + SLI G + +V +
Sbjct: 109 ELEEGAVLLGAQDRNKYPILPGLLKGSSKEEYFLGSWEGDPDDCFASLITGINVENVNII 168
Query: 151 GDNGTIDGQGSVWWDWFSSQSLNYS-RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
G NG IDG S+ WF ++ + RP ++ + +N++V ++T N+P++ IHP+
Sbjct: 169 G-NGIIDGNASIDNWWFEAKKKRIAWRPRMIFLVGCKNILVESVTVKNSPSWTIHPLMSE 227
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
++ N+ + P +SP T G+ P+S NV I ++G D I++KSG P+
Sbjct: 228 DLKFINLYIENPKDSPNTDGLDPESCKNVHILGVNFSVGDDCIAIKSGKIFISKIKTMPS 287
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIR 327
++IR + G +V GSEMS GI+N+ VE ++ GI +T +GRG I
Sbjct: 288 QHIYIRNCNMNFGHG-AVVLGSEMSSGINNIYVENCLFNETDRGIRIKTRRGRGDTAIID 346
Query: 328 QIVISDAELYNINVAFGACGNCGSHPDDDFDP------------DALPAIDQITFKDIIG 375
+I + ++ + F NC D D D P I I ++I
Sbjct: 347 EIYARNIKMNKVLTPFTI--NCFYFCDIDGKTEYVWSKEKLPIDDKTPYIGNIYLQNITC 404
Query: 376 TNITIAGNFT-GIQEAPFANICLSNISLSIN 405
N +A F G+ E + + NI ++ +
Sbjct: 405 LNAQVAAGFMYGLPERKIKKVKMENIYVNFD 435
>gi|266623900|ref|ZP_06116835.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864287|gb|EFC96585.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 537
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 187/372 (50%), Gaps = 38/372 (10%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++++ FGA GDG +TLA Q AI + K G ++Y+P GK+L S L S TL
Sbjct: 81 TLNVRRFGAKGDGIHDDTLAIQTAI----ASCPKDG-RVYIPEGKYLVTSLFLKSDFTLD 135
Query: 100 LEKGAVILGSQNPSHWDVVDPL-PSYGRGIEL--------PGRRYKSLINGYMLRDVVVT 150
+ K AV+LG + V+ + SY E P + S+I G + +VV+T
Sbjct: 136 IGKNAVLLGHAEREKFGVLPGMIQSYDETGEYNLGSWEGNPLDIFTSMITGIHVSNVVIT 195
Query: 151 GDNGTIDGQGSV--WWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
G+ GT+DG + WW+ ++ + + RP +V ++VV+ +T N+P++N+HP +
Sbjct: 196 GE-GTLDGCATFDDWWEDDRAKIIAF-RPRMVFLNHCDHVVLHGVTIQNSPSWNLHPYFS 253
Query: 209 SNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRP 268
++ ++++ P +SP T G+ P+S + + I ++G D I+LKSG G Y P
Sbjct: 254 DDLRFLDLTILNPWDSPNTDGMDPESVNGLEIAGIYFSLGDDCIALKSGKYYMGHKYKVP 313
Query: 269 TTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQ 328
+ ++ +R+ + + G +V GSEM+ G+ +V V+ + G+ +T +GRG +
Sbjct: 314 SQNIEVRQCCMNNGHG-AVTIGSEMAAGVKHVHVKDCLFLHTDRGLRIKTRRGRG---KD 369
Query: 329 IVISDAELYNINV----------AFGACGNCGSHPDDDFDPDAL------PAIDQITFKD 372
V+ D NI + +F C + H D L P++ Q+ F++
Sbjct: 370 AVVEDICFENIRMDHVLTPFVLNSFYNCCDPDCHSDYVKCKSPLPVDERTPSVKQMVFRN 429
Query: 373 IIGTNITIAGNF 384
I N +AG F
Sbjct: 430 IEAHNCHVAGAF 441
>gi|335034438|ref|ZP_08527786.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
gi|333794034|gb|EGL65383.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
Length = 517
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 172/374 (45%), Gaps = 32/374 (8%)
Query: 51 DGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQ 110
+G N A +NA+ + + G L + G W L S +TL L +GAV+
Sbjct: 101 EGARANATALENAVAAVPA-----GGTLRLGPGVWTAFPVRLKSEMTLHLAEGAVLRAPS 155
Query: 111 NPSHWDVVDPLPSYGRGIE----LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WW 164
+ W ++ GR + LP + + ++ ++V+ G G +DG G WW
Sbjct: 156 VRNSWPILPARDEAGRMLGSWEGLPDACFAAPVDAIGADNLVIEG-RGILDGSGDKGDWW 214
Query: 165 DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES 224
W RP + +S + T NA ++ IHP C ++ +++ AP +S
Sbjct: 215 SWPKETRDGARRPRGLHLVSCRKTQLLGFTIRNAASWTIHPQGCEDLTAAGLTIIAPHDS 274
Query: 225 PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGW-----DEYGIAYGRPTTDVHIRRVLL 279
P T G P+S NV I ++G D I++K+G ++ +A T + +R L+
Sbjct: 275 PNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAE---TRGISVRHCLM 331
Query: 280 QSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI 339
Q G V GSEMSGG+ +V VE + + G+ +T +GRGG + I + L +
Sbjct: 332 QRGHGGLV-IGSEMSGGVHDVTVEDCDMIGTDRGLRLKTRRGRGGIVSNITMRRVLLDGV 390
Query: 340 NVAFGACG--NCGSHPDDDF----DP----DALPAIDQITFKDIIGTNIT-IAGNFTGIQ 388
A A +C + DD+ +P D P +D IT +D+ N+ AG F G+
Sbjct: 391 QTALSANAHYHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLGLP 450
Query: 389 EAPFANICLSNISL 402
EAP NI + N+++
Sbjct: 451 EAPIRNIVVRNLTI 464
>gi|347531917|ref|YP_004838680.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345502065|gb|AEN96748.1| glycoside hydrolase family 28 [Roseburia hominis A2-183]
Length = 518
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 192/391 (49%), Gaps = 36/391 (9%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++++ +FGA GDG + +T Q AI A +++ +P+G + S L S +++
Sbjct: 82 TLNVRKFGAKGDGVSDDTTFIQAAIM-----ACPPESRVLIPAGTYKITSLFLKSGISVE 136
Query: 100 LEKGAVILGSQNPSHWDVV-------DPLPSYGRGI----ELPGRRYKSLINGYMLRDVV 148
L KGA +L + SH+ ++ D Y G LP + +I+G + DV
Sbjct: 137 LAKGAELLADTDRSHYAILPGLIESYDETGDYNLGTWEGNPLP--MFAGIISGIDVSDVN 194
Query: 149 VTGDNGTIDGQGSVWWDWFSSQSLNYS--RPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
+ G+ G+I+G S +W+ ++ + RP ++ N+ V L F ++PA+ IHP
Sbjct: 195 LYGE-GSINGAAS-HENWWKNEKVMVGAFRPRMLSLNRCRNIRVQGLYFHDSPAWVIHPY 252
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
+ + N+ V P +SP T G+ P+S +V I ++G D I++KSG G Y
Sbjct: 253 FSDELLFCNLIVENPAKSPNTDGLDPESCRDVTICGVRFSLGDDCIAVKSGKIYMGRRYK 312
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--G 324
P++++H+ + L++ G +V GSEM+GG++N+ VEK Y + G+ +T +GRG
Sbjct: 313 TPSSNIHVYQCLMEHGHG-AVTVGSEMAGGVNNLIVEKCRFYHTDRGLRIKTRRGRGKDA 371
Query: 325 YIRQIVISDAELYNINVAFGACGNCGSHPDDDFD----------PDALPAIDQITFKDII 374
+ I+ D + + F A PD + D P++ + F++I
Sbjct: 372 ILDNIIFRDLMMEQVMTPFTANAFYFCDPDGRTEFVQSREPYPVDDGTPSMKRFCFENIT 431
Query: 375 GTNITIAGN-FTGIQEAPFANICLSNISLSI 404
+ +A + F G+ E I + N+S+S
Sbjct: 432 AKDCHVAASYFDGLPEQKIEQITMRNVSVSF 462
>gi|293369380|ref|ZP_06615965.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336406828|ref|ZP_08587475.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
gi|292635547|gb|EFF54054.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335933190|gb|EGM95200.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
Length = 529
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 198/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA GDG LNT A +AI K +GG ++ +P G WLTG L S++ L
Sbjct: 48 YEVNIEKFGAKGDGLFLNTKAINDAI---KDVNQRGGGKVIIPEGVWLTGPIELLSNVNL 104
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ A++L + + + ++ + G+E RR +S I+ ++ +TG +GT DG
Sbjct: 105 YTEQNALVLFTGDFEAYPII---ATSFEGLET--RRCQSPISVRNAENIAITG-HGTFDG 158
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W W+ + + +N
Sbjct: 159 NGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACKDFNVPEGINTD 218
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ + S+ V++ +TF N+P++ +HP+ C + + NI V P S
Sbjct: 219 EEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQ 278
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
I +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 279 NGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGG 338
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 339 FVV-GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLL 397
Query: 339 INVAFGACGNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G ++D AI +T F++I +NI G+ F G+
Sbjct: 398 FDLFYGGKG-AGEESEEDLLSRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 456
Query: 389 EAPFANICLSNISLS 403
E P +NI + N+ ++
Sbjct: 457 EMPISNITVKNVVMT 471
>gi|160887026|ref|ZP_02068029.1| hypothetical protein BACOVA_05040 [Bacteroides ovatus ATCC 8483]
gi|423288884|ref|ZP_17267735.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
gi|156107437|gb|EDO09182.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|295086775|emb|CBK68298.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|392668974|gb|EIY62466.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
Length = 539
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 198/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA GDG LNT A +AI K +GG ++ +P G WLTG L S++ L
Sbjct: 58 YEVNIEKFGAKGDGLFLNTKAINDAI---KDVNQRGGGKVIIPEGVWLTGPIELLSNVNL 114
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ A++L + + + ++ + G+E RR +S I+ ++ +TG +GT DG
Sbjct: 115 YTEQNALVLFTGDFEAYPII---ATSFEGLET--RRCQSPISVRNAENIAITG-HGTFDG 168
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W W+ + + +N
Sbjct: 169 NGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACKDFNVPEGINTD 228
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ + S+ V++ +TF N+P++ +HP+ C + + NI V P S
Sbjct: 229 EEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQ 288
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
I +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 289 NGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGG 348
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 349 FVV-GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLL 407
Query: 339 INVAFGACGNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G ++D AI +T F++I +NI G+ F G+
Sbjct: 408 FDLFYGGKG-AGEESEEDLLSRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 466
Query: 389 EAPFANICLSNISLS 403
E P +NI + N+ ++
Sbjct: 467 EMPISNITVKNVVMT 481
>gi|329925656|ref|ZP_08280474.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
gi|328939683|gb|EGG36026.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
Length = 523
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 193/430 (44%), Gaps = 72/430 (16%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
H+V+I+++GAVG+G NT F AI ++ A GG + +P G W TG L S + L
Sbjct: 19 HTVTISDYGAVGNGVYDNTRVFHQAI---EACAKAGGGTVVIPPGIWRTGPIKLQSRIEL 75
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSY-GRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
GA+++ S+ + ++ + +Y GR + R +S ++G L DV +TG +G D
Sbjct: 76 HASAGALVVFSKFFEDYPLL--MSTYEGRQM----FRCQSPLDGEGLEDVAITG-SGIFD 128
Query: 158 GQGSVW------------WD--------------WFSSQSL------------------- 172
G G W W+ W+ + +
Sbjct: 129 GSGEAWRPVKQGKLTESQWERLIQSGGVVDDQGLWWPTPAARDGQETLDRIEQTGSEEPQ 188
Query: 173 ------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPY 226
+Y RP+L+ + + +++S TF N+ A+ +HP + IQNI+V P +
Sbjct: 189 DYVPVRDYLRPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQN 248
Query: 227 TVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSS 286
G+ DS V +E+ +G DAI LKSG +E G G+P+ + IR + G
Sbjct: 249 GDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERIRIRNCTVYHGHG-G 307
Query: 287 VAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI------- 339
+ GSEMSGGI +V V + GI F++ +GRGG + I+I + +I
Sbjct: 308 IVVGSEMSGGIKDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRDIDGDAISF 367
Query: 340 NVAFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICL 397
N+ + G + ++ P + P I +DI+ + A G+ E P N+ +
Sbjct: 368 NLYYEGKAGSGEYQEEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVENLTV 427
Query: 398 SNISLSINPG 407
+++ G
Sbjct: 428 KRSAITSREG 437
>gi|15891800|ref|NP_357472.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
gi|15160276|gb|AAK90257.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
Length = 517
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 172/374 (45%), Gaps = 32/374 (8%)
Query: 51 DGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQ 110
+G N A +NA+ + + G L + G W L S +TL L +GAV+
Sbjct: 101 EGARANATALENAVAAVPA-----GGTLRLGPGVWTAFPVRLKSDMTLHLAEGAVLRAPS 155
Query: 111 NPSHWDVVDPLPSYGRGIE----LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WW 164
+ W ++ GR + LP + + ++ ++V+ G G +DG G WW
Sbjct: 156 VRNRWPILPARDEAGRMLGSWEGLPDACFAAPVHAIGADNLVIEG-RGILDGSGDKGDWW 214
Query: 165 DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES 224
W RP + +S + T NA ++ IHP C ++ +++ AP +S
Sbjct: 215 SWPKETREGARRPRGLHLVSCHKTQLLGFTIRNAASWTIHPQGCEDLTAAGLTIIAPHDS 274
Query: 225 PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGW-----DEYGIAYGRPTTDVHIRRVLL 279
P T G P+S NV I ++G D I++K+G ++ +A T + +R L+
Sbjct: 275 PNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAE---TRGISVRHCLM 331
Query: 280 QSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI 339
Q G V GSEMSGG+ +V VE + + G+ +T +GRGG + I + L +
Sbjct: 332 QRGHGGLV-IGSEMSGGVHDVTVEDCDMIGTDRGLRLKTRRGRGGMVGNITMRRVLLDGV 390
Query: 340 NVAFGACG--NCGSHPDDDF----DP----DALPAIDQITFKDIIGTNIT-IAGNFTGIQ 388
A A +C + DD+ +P D P +D IT +D+ N+ AG F G+
Sbjct: 391 QTALSANAHYHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLGLP 450
Query: 389 EAPFANICLSNISL 402
EAP NI + N+++
Sbjct: 451 EAPIRNIVVRNLTI 464
>gi|430005219|emb|CCF21020.1| Polygalacturonase-like protein [Rhizobium sp.]
Length = 521
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 170/371 (45%), Gaps = 27/371 (7%)
Query: 59 AFQNAIFYLKSFAD-KGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDV 117
A +NA + AD G L + G+W L S +TL L +GA + + W V
Sbjct: 105 ALRNADALQAAIADLPVGGTLRIGPGRWTALPVTLRSDMTLHLAEGAELCSPSSRDSWSV 164
Query: 118 VDPLPSYGRGIE----LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WWDWFSSQS 171
+ G + P + + ++ R +V+ G G +DG G+ WW W
Sbjct: 165 FPARDNAGHLLGSWEGEPAACFAAPLHAIGARRLVLEG-KGILDGAGNAGDWWGWAKETR 223
Query: 172 LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIV 231
R + I +V + T NAP++ IHP C + +S+ AP +SP T G
Sbjct: 224 DGARRARGLHLIDCSDVTLFGFTIRNAPSWIIHPQGCHRLVAACLSIEAPHDSPNTDGFN 283
Query: 232 PDSSDNVCIEDCIIAMGHDAISLKSGWDEYG----IAYGRPTTDVHIRRVLLQSSSGSSV 287
P+ S + +E +G D I++K+G + G A+ R T DV IR L++ G V
Sbjct: 284 PEGSSEIRVEGVRFTVGDDCIAIKAG--KRGPCGEAAHLRETRDVQIRHCLMERGHG-GV 340
Query: 288 AFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACG 347
GSEMSGG+ +V VE + + G+ +T +GRGG + I + + + AF A
Sbjct: 341 VIGSEMSGGVHDVLVEDCEMIGTDRGLRLKTRRGRGGSVSGITMRRVRMEGVLTAFSANA 400
Query: 348 NCGSHPD--DDF----DPDAL----PAIDQITFKDIIGTNITIA-GNFTGIQEAPFANIC 396
+ PD D++ P AL P ID I +DI + A G F G+ EAP N+
Sbjct: 401 HYHCDPDGHDEWVQSRQPAALDEGTPEIDGIAVEDIDLHEVGHAVGAFLGLPEAPIRNVS 460
Query: 397 LSNISL-SINP 406
+ N+ + S +P
Sbjct: 461 IRNLRVHSFDP 471
>gi|448419310|ref|ZP_21580352.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
gi|445675300|gb|ELZ27833.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
Length = 541
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 174/391 (44%), Gaps = 38/391 (9%)
Query: 38 PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLT 97
P ++ E+G + D +L+T A Q A L A +GG ++Y+PSG +L+ + T
Sbjct: 26 PDQRNVREYG-IEDDDSLDTEAIQAA---LDDCAGEGG-EVYLPSGTYLSAPLRVGDDTT 80
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
L + GA + + + V+ S G G + + +V +TG+ G +D
Sbjct: 81 LRVANGAELRFVGDFREFPTVE---SRWEGWNQDG--FHPCLYVADAENVTITGE-GVVD 134
Query: 158 GQGSVWWDWFSSQSLNYS------------------------RPHLVEFISSENVVVSNL 193
G GS WWD + + RP L++ ENV VS +
Sbjct: 135 GGGSHWWDLVETPEAEFPDDLKERLAEIRSGHRQDDVSTFTVRPPLLQIHECENVTVSGV 194
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
T N+P +N H VY +V I ++S+ PP++P GI DSS V + D I G DAI
Sbjct: 195 TLRNSPFWNTHVVYSEDVTIHDVSIRNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAIC 254
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG 313
LKSG DE G GRPT +V + ++ G V GSE +G + +V V D+ G
Sbjct: 255 LKSGKDEEGREVGRPTENVVVTNCTVEHGHG-GVVVGSETAGDVRHVTVTNCTFTDTDRG 313
Query: 314 IEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP--DALPAIDQITFK 371
I ++ +GRGG + + + + F G + D D P +A P + + F
Sbjct: 314 IRIKSKRGRGGTVEDLRFDTIVMRRVACPFVLNGYYQTDIDSDPKPVDEATPNVRNVNFH 373
Query: 372 DIIGTNITIAGNFTGIQEAPFANICLSNISL 402
I + A G+ E F I +++ +
Sbjct: 374 HITAEEVESAAFLAGLPERRFEGISFTDVDI 404
>gi|326800288|ref|YP_004318107.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326551052|gb|ADZ79437.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 543
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 199/448 (44%), Gaps = 78/448 (17%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
+ +VSIT FGA+ G+ LNT + AI KGG + +P+G WL+G L S++
Sbjct: 33 KKDTVSITAFGAISGGRHLNTESINQAI---DQTHKKGGGVVLIPAGVWLSGPITLKSNI 89
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
L L A++ +++ S + +V + GI P R +S I +++ +TG G I
Sbjct: 90 NLHLAANALLQFTKDFSQYSLVQ---TSWEGI--PQMRNQSPIWALNQQNIAITG-KGVI 143
Query: 157 DGQGSVW------------WD---------------WFSSQS------------------ 171
DG G W W W+ SQS
Sbjct: 144 DGNGDAWRMVKKAKMTETQWKKLISSGGVLNEKGDIWYPSQSSLKGASYKDPGLVEKGKN 203
Query: 172 -------LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES 224
+Y RP+++ E +++ +TF N+ A+NIHP+ +++ I+NI+V P S
Sbjct: 204 AQFYEEIKDYLRPNMILLEKCERILLEGVTFQNSAAWNIHPLMSADLTIRNINVRNPWYS 263
Query: 225 PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSG 284
G+ +S NV +E +G DAI +KSG +E G G PT ++ +R + + G
Sbjct: 264 QNGDGLDIESCKNVLVEQSTFDVGDDAICIKSGRNEAGRERGMPTENLWVRNCTVYHAHG 323
Query: 285 SSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI----- 339
V GSEMSGG N+ V+ + G+ F+TT+GRGG + + I++ + +I
Sbjct: 324 GFVV-GSEMSGGAKNLYVDNCTFIGTDIGLRFKTTRGRGGVVENVYINNIFMKDIPGEAI 382
Query: 340 --NVAFGA------CGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQE 389
++ + A G P +F P +A P +++ A G+ E
Sbjct: 383 LFDMYYEAKDPIVLSGEHREPPKVEFLPVTEATPQFKDFYINNVVCDGAAKALFIRGLPE 442
Query: 390 APFANICLSNISLSINPGSYNSWECSNI 417
NI L+ + + G + E SNI
Sbjct: 443 MHIKNIQLTRLDMVAKEG-IDIQEASNI 469
>gi|448621831|ref|ZP_21668580.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
gi|445754861|gb|EMA06255.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
Length = 512
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 170/378 (44%), Gaps = 37/378 (9%)
Query: 51 DGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQ 110
D +L+T A Q A L A +GG ++Y+P G + + + TL L GA + Q
Sbjct: 8 DDDSLDTAAIQAA---LDDCAGEGG-EVYLPPGTYRSAPLRVGDDTTLRLANGAELRFVQ 63
Query: 111 NPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQ 170
+ + + V+ S G G + ++ +V +TG+ G IDG GS WW++ S
Sbjct: 64 DFTEFPTVE---SRWEGWNQDG--FHPCLHVADAANVTITGE-GVIDGGGSYWWEFVSVP 117
Query: 171 SLNYS------------------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
Y RP L++ ENV VS +T N+P +N H V
Sbjct: 118 PEEYPPALAERLAEIRSGNKQDAVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNTHVV 177
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y +V + ++S+ PP++P GI DSS V + D I G DAI LKSG DE G G
Sbjct: 178 YSEDVTVHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEEGREVG 237
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
RPT +V + ++ G V GSE +G + +V V D+ GI ++ +GRGG +
Sbjct: 238 RPTENVVVTNCTVEHGHG-GVVIGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTV 296
Query: 327 RQIVISDAELYNINVAFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNF 384
+ + + F G + D D +P +A P + + F I + A
Sbjct: 297 EDLRFDTIVMRRVACPFVINGYYQTDIDSDPEPVTEATPNVRNVDFHHITAEEVESAAFL 356
Query: 385 TGIQEAPFANICLSNISL 402
G+ E F I +++ +
Sbjct: 357 AGLPERRFEGISFTDVDI 374
>gi|399031152|ref|ZP_10731291.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070621|gb|EJL61913.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 562
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 199/430 (46%), Gaps = 79/430 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
++V+I +FGAV G LNT AF +AI + + KGG ++ +P G WLTG L S+L L
Sbjct: 53 NTVNIKDFGAVNGGYVLNTKAFADAI---DAVSKKGGGKVVIPPGIWLTGPIILKSNLEL 109
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
E GA+I S + S + +V+ + G L R S I G L ++ TG G DG
Sbjct: 110 HAETGALIKFSTDKSLYPLVE---TSFEG--LNTWRCISPIYGKNLENIAFTG-KGVWDG 163
Query: 159 QGSVW------------WD---------------WFSSQSL------------------- 172
G VW W W+ S++
Sbjct: 164 SGEVWRQVKKSKLTESQWKKFVASGGVLNEKKESWYPSETFMKASVGADQNVRLDLKTKE 223
Query: 173 ------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPY 226
++ RP LV +S+ V+ F N+PA+NIHP+ ++ ++N++V P S
Sbjct: 224 EFEAIHDFLRPVLVSIQNSKRVMFDGPVFQNSPAWNIHPLMIEDLIVRNVTVRNPWFSQN 283
Query: 227 TVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSS 286
G+ +S NV +E+ +G DAI +KSG D+ G G P ++ ++ ++ G
Sbjct: 284 GDGLDVESCKNVIVENSSFDVGDDAICIKSGKDKDGRDRGIPCENIIVKNNIVYHGHG-G 342
Query: 287 VAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI------- 339
V GSEMSGG+ N+ V + G+ F++ +GRGG + I ISD + +I
Sbjct: 343 VTVGSEMSGGVKNLHVSNCSFMGTDVGLRFKSNRGRGGVVENIFISDIYMTDIPSQAISF 402
Query: 340 NVAFG--ACGNCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEA 390
++ +G + + + +P +D+ T FK+I N+TIAG G+ E
Sbjct: 403 DLYYGGKSIAETLAEGGNTVSSKKVP-VDEKTPQFKNISIKNVTIAGAQQAVFLQGLPEM 461
Query: 391 PFANICLSNI 400
NI ++N+
Sbjct: 462 NLENIEITNL 471
>gi|294816001|ref|ZP_06774644.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444344|ref|ZP_08219078.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328600|gb|EFG10243.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 477
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 183/402 (45%), Gaps = 61/402 (15%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT +GAVGDG T NT AF++AI ++ GG ++ VP G++LTG+ L S + L + +
Sbjct: 67 ITRYGAVGDGVTKNTRAFRDAI---RACHRAGGGRVVVPRGRFLTGAIQLRSQVELHVRE 123
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
G +L S +P D + + + G E Y S I +D+ +TG GT+DGQG
Sbjct: 124 GGTVLFSTDPR--DYLPMVFTRWEGTECWN--YSSFIYARGQQDLAITG-RGTLDGQGMA 178
Query: 163 --WWDWFS----------------------SQSL----NYSRPHLVEFISSENVVVSNLT 194
W W Q L ++ RP++++F N+++ ++T
Sbjct: 179 GPWKSWRDPGGNALVDQAELRRMGTEGVPVDQRLFGDGHHLRPNMIQFYDCRNILMQDIT 238
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
L P + IHPV C NV ++N+ V + + G+ P+ + ++ I C D+I++
Sbjct: 239 VLEPPMWTIHPVLCRNVTLRNVDVIGRINN--SDGVDPECTSDMLITGCRFHTEDDSIAV 296
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL------- 307
KSG DE G G P+ ++ IR + G VA GSEMSGG+ +V E +
Sbjct: 297 KSGRDEDGHRIGVPSRNIVIRDCVFSGRWG-GVAVGSEMSGGVRDVFAEDCRINPVDFPG 355
Query: 308 -YDSLNGIEFRTTKGRGG-----YIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDA 361
Y+ + + +T K RGG YIR+ + + + G G P
Sbjct: 356 RYNPRHPVFIKTNKKRGGSITGVYIRRFTGRAIDRDCVYLTTRYAGQQGERP-------- 407
Query: 362 LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
I I +D++ A + G+ PF + ++ +
Sbjct: 408 -AVIRDIRIEDMVHDGARRAIHLEGLDSDPFTGVHIARCRFT 448
>gi|355673331|ref|ZP_09058928.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
gi|354814797|gb|EHE99396.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
Length = 532
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 187/411 (45%), Gaps = 56/411 (13%)
Query: 33 TLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNL 92
T D ++++ +FGA GDG +TL Q+A+ A +++ VP+G + S L
Sbjct: 85 TTDREFVTLNVRDFGAKGDGIQDDTLFIQSAVM-----ACPKDSRVLVPAGTYRIVSLFL 139
Query: 93 TSHLTLFLEKGAVILGSQNPSHWDVV--------------------DPLPSYGRGIELPG 132
++ + LEKGAV+ + S + V+ DPLP +
Sbjct: 140 KDNVKIELEKGAVLSADTDRSRFPVLKGMIKSFDGKDEYNLGTWEGDPLPMFS------- 192
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQ---GSVWWDWFSSQSLNYS-RPHLVEFISSENV 188
+++ G + + V+ G G I+G G W W + + + RP +V ++V
Sbjct: 193 ----AVVTGINIENAVIYG-RGVIEGNAGFGEENW-WHDPKRMKTAFRPRMVFLERCKHV 246
Query: 189 VVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMG 248
V+ LT N+P++NIHP + ++ ++ V +P +SP T G+ P+S +V I ++G
Sbjct: 247 VIQGLTLRNSPSWNIHPYFSEHLKFLDLRVLSPKDSPNTDGLDPESCRDVEITGICFSVG 306
Query: 249 HDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY 308
D I++KSG G Y RP+ D+ + R ++ G SV GSEM+GG+ N+ V
Sbjct: 307 DDCIAVKSGKIYMGTTYKRPSEDIVVSRCCMRDGHG-SVTIGSEMAGGVKNLTVRDCVFR 365
Query: 309 DSLNGIEFRTTKGRG--GYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD-------- 358
+ G+ +T +GRG + I+ + + F PD + +
Sbjct: 366 HTDRGLRIKTRRGRGKNAVVDGILFERIHMDQVKTPFVINSFYYCDPDGNSEYVRTKERL 425
Query: 359 --PDALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSINP 406
D P I +TF+DI N +A + G+ E + + +S+S P
Sbjct: 426 PVDDRTPWIKHLTFRDIEAVNCHVAAAYLYGLPERKIGKVEMERVSISFTP 476
>gi|418409920|ref|ZP_12983231.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
gi|358003969|gb|EHJ96299.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
Length = 523
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 168/375 (44%), Gaps = 36/375 (9%)
Query: 52 GKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQN 111
G N A + A+ + + G L +G W L S +T L +GAV+
Sbjct: 101 GARANARALEEAVAAVPA-----GGTLRFAAGLWTAFPVRLKSDMTFHLAEGAVLRAPST 155
Query: 112 PSHWDVVDPLPSYGRGIE----LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WWD 165
+ W ++ GR + LP + + ++ ++V+ G G +DG G WW
Sbjct: 156 RNGWPILPARDETGRMLGSWEGLPDACFAAPVHAIGADNLVIEG-TGVLDGSGDRGDWWS 214
Query: 166 WFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
W RP + +S NV + T NAP++ +HP C + +++ AP SP
Sbjct: 215 WPKETRDGARRPRGLHLVSCRNVGLFGFTIRNAPSWTVHPQGCETLKAAGLTISAPHNSP 274
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGW-----DEYGIAYGRPTTDVHIRRVLLQ 280
T G P+S NV I ++G D I++K+G ++ +A T V +R L++
Sbjct: 275 NTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAE---TRGVSVRHCLME 331
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN 340
G V GSEMSGG+ NV VE + + G+ +T +GRGG + + + L +
Sbjct: 332 RGHGGLV-IGSEMSGGVHNVTVEDCDMVGTDRGLRLKTRRGRGGSVSNVTMRRVLLDGVQ 390
Query: 341 VAFGACGNCGSHPDDD--------FDPDAL----PAIDQITFKDIIGTNIT-IAGNFTGI 387
A A N H D D DP + P ID IT +D+ ++ AG F G+
Sbjct: 391 TALSA--NAHYHCDADGHDGWVQSRDPAPVDYGTPFIDGITVEDVEIRHLAHAAGVFLGL 448
Query: 388 QEAPFANICLSNISL 402
EAP NI + N+++
Sbjct: 449 PEAPIRNIAIRNLTI 463
>gi|298482165|ref|ZP_07000353.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271722|gb|EFI13295.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 539
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 199/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA GDG LNT A +AI K +GG ++ +P G WLTG L S++ L
Sbjct: 58 YEVNIEKFGAKGDGLYLNTKAINDAI---KEVNQRGGGKVIIPEGIWLTGPIELLSNVNL 114
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ A++L + + + ++ + G+E RR +S I+ ++ +TG GT DG
Sbjct: 115 YTEQNALVLFTGDFEAYPII---ATSFEGLET--RRCQSPISARNAENIAITG-YGTFDG 168
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W W+ + + +N
Sbjct: 169 NGDCWRPVKKGKLTASQWKKLVSSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTD 228
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ + S+ V++ +TF N+P++ +HP+ C + + NI V P S
Sbjct: 229 EEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQ 288
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
I +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 289 NGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGG 348
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 349 FVV-GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLL 407
Query: 339 INVAFGACGNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G ++D ++P + + T F++I +NI G+ F G+
Sbjct: 408 FDLFYGGKG-AGEESEEDLLNRMKTSIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 466
Query: 389 EAPFANICLSNISLS 403
E P +NI + N+ ++
Sbjct: 467 EMPISNITVKNVVMT 481
>gi|408369670|ref|ZP_11167450.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407744724|gb|EKF56291.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 454
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 183/398 (45%), Gaps = 56/398 (14%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT++GA+ + + + A +AI K +GG ++ +P G+WLTG +L S++ L LE+
Sbjct: 54 ITDYGALPNDQKATSRAIMDAI---KEAHAQGGGRVVIPKGEWLTGKIHLKSNINLHLEQ 110
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GAV+L S NP D LP+ E L Y LI Y +++ +TG G + +
Sbjct: 111 GAVLLFSDNPQ-----DYLPAVHSSWEGLECFNYSPLIYAYKCKNIAITGQ-GELKAKMD 164
Query: 162 VWWDWF------------------------SSQSLNYS---RPHLVEFISSENVVVSNLT 194
W WF Q +N S RP ++F SEN+++ +T
Sbjct: 165 TWRSWFDRPPGHMNSLKELYHMAANNVPVEQRQMVNDSANLRPQFIQFNRSENILLQGVT 224
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
N+P + IHP NV I+ ++V A + G+ P+ S N+ IE+C G DAI++
Sbjct: 225 ITNSPFWVIHPYLSKNVSIKEVTVFAHGHN--NDGVDPEMSQNIIIENCTFDQGDDAIAV 282
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYD--SLN 312
KSG ++ P ++ I+ + + +A GSE+SGGI N+ + + LN
Sbjct: 283 KSGRNQDAWRLATPAKNIVIKNCKI-INGHQLMAIGSELSGGIENIYMSNCQVEQGAKLN 341
Query: 313 GIEF-RTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD--------PDALP 363
+ F +T + RGG ++S+ + +I A G G D + L
Sbjct: 342 HLLFIKTNERRGG-----IVSNIYMDSIQAGEIAEGILGIDTDVLYQWRNLVPTYQRELT 396
Query: 364 AIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS 401
I + DI N+ +G ++ P N+ L+ ++
Sbjct: 397 VIKDVYLSDIHAENVAFISKISGQEQVPVKNVVLNRVT 434
>gi|254392545|ref|ZP_05007723.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706210|gb|EDY52022.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 462
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 183/402 (45%), Gaps = 61/402 (15%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT +GAVGDG T NT AF++AI ++ GG ++ VP G++LTG+ L S + L + +
Sbjct: 52 ITRYGAVGDGVTKNTRAFRDAI---RACHRAGGGRVVVPRGRFLTGAIQLRSQVELHVRE 108
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
G +L S +P D + + + G E Y S I +D+ +TG GT+DGQG
Sbjct: 109 GGTVLFSTDPR--DYLPMVFTRWEGTECWN--YSSFIYARGQQDLAITG-RGTLDGQGMA 163
Query: 163 --WWDWFS----------------------SQSL----NYSRPHLVEFISSENVVVSNLT 194
W W Q L ++ RP++++F N+++ ++T
Sbjct: 164 GPWKSWRDPGGNALVDQAELRRMGTEGVPVDQRLFGDGHHLRPNMIQFYDCRNILMQDIT 223
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
L P + IHPV C NV ++N+ V + + G+ P+ + ++ I C D+I++
Sbjct: 224 VLEPPMWTIHPVLCRNVTLRNVDVIGRINN--SDGVDPECTSDMLITGCRFHTEDDSIAV 281
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL------- 307
KSG DE G G P+ ++ IR + G VA GSEMSGG+ +V E +
Sbjct: 282 KSGRDEDGHRIGVPSRNIVIRDCVFSGRWG-GVAVGSEMSGGVRDVFAEDCRINPVDFPG 340
Query: 308 -YDSLNGIEFRTTKGRGG-----YIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDA 361
Y+ + + +T K RGG YIR+ + + + G G P
Sbjct: 341 RYNPRHPVFIKTNKKRGGSITGVYIRRFTGRAIDRDCVYLTTRYAGQQGERP-------- 392
Query: 362 LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
I I +D++ A + G+ PF + ++ +
Sbjct: 393 -AVIRDIRIEDMVHDGARRAIHLEGLDSDPFTGVHIARCRFT 433
>gi|339499261|ref|YP_004697296.1| polygalacturonase [Spirochaeta caldaria DSM 7334]
gi|338833610|gb|AEJ18788.1| Polygalacturonase [Spirochaeta caldaria DSM 7334]
Length = 467
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 171/376 (45%), Gaps = 51/376 (13%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
+K GG L + SG + +G L S++ L++E+ A + + + + + P+ +
Sbjct: 28 IKKLTSVGGGILKLTSGVFFSGPLQLYSNIHLYIEENATLTFN---ADFSLYKPVWTRWE 84
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD--WFSS--------------- 169
G+E LI ++ + G +G IDG G WW+ W +
Sbjct: 85 GVECWA--MHPLIFASKAENITIAG-SGHIDGNGEPWWNSLWQAKAEKRTHPKYPYELQL 141
Query: 170 ----------------QSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHI 213
+ L + RP L++F++ +N+ + N+T N+P +N H +CS+ I
Sbjct: 142 ADLNKDYRNQPSGGGGRELQFLRPPLIQFLNCKNITLQNVTLQNSPFWNTHFAFCSDCTI 201
Query: 214 QNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVH 273
+ P E+P T G+ DS ++ I++C +G D + LKSG E GI RPT ++
Sbjct: 202 TGVHFINPKEAPNTDGLNIDSCSSITIQNCTFDVGDDCLGLKSGSGEDGIRINRPTENIL 261
Query: 274 IRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD 333
I +++ G V GSE +GGI+N+++ + ++ G+ +T +GRGG I I +
Sbjct: 262 IDSCTMKNGHG-GVVIGSETAGGINNIKITNCSMEETDRGLRIKTRRGRGGVIENIRLEH 320
Query: 334 AELYNI------NVAFGACGNCGSHPDDDFDPDAL----PAIDQITFKDIIGTNITIAGN 383
+ NI N +G G S P DP L P I I +I + A
Sbjct: 321 CYMKNILCPLVVNCYYGPGGPKSSSPIFSLDPQPLSATTPKIQNIYISHLIAEHCRAAAA 380
Query: 384 F-TGIQEAPFANICLS 398
F G+ E P N+ +S
Sbjct: 381 FIVGLPEQPIKNLYIS 396
>gi|15893646|ref|NP_346995.1| polygalacturonase [Clostridium acetobutylicum ATCC 824]
gi|337735568|ref|YP_004635015.1| polygalacturonase [Clostridium acetobutylicum DSM 1731]
gi|384457079|ref|YP_005669499.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|15023202|gb|AAK78335.1|AE007550_2 Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
ATCC 824]
gi|325507768|gb|ADZ19404.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|336292627|gb|AEI33761.1| putative polygalacturonase (pectinase) [Clostridium acetobutylicum
DSM 1731]
Length = 513
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 191/397 (48%), Gaps = 36/397 (9%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V+I +FGAVGDG +NT Q AI +F ++ +P G +LTG L S++TL L
Sbjct: 84 VNILDFGAVGDGNHVNTAFIQAAIQVCPAFG-----RVIIPKGTYLTGPLFLKSNITLEL 138
Query: 101 EKGAVILGSQNPSHWDVVDP-LPSYGRGIEL------PGRRYKSLINGYMLRDVVVTGDN 153
E+G+V+LG + H+ ++ + R L + SLI + +V + G
Sbjct: 139 EEGSVLLGLKEREHYPILKANISMTNRDFYLGSWEGNEADCFASLITAINVENVNIIG-K 197
Query: 154 GTIDGQGSVWWDWFSSQSLNYS-RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVH 212
GTIDG WF ++ + RP + + +N++V +T N+P++ IHP+ ++
Sbjct: 198 GTIDGNSDFDTWWFKAKEKRIAWRPRTLFLNACKNILVEGVTIKNSPSWTIHPLMSDHLK 257
Query: 213 IQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTT-- 270
N+S+ P +P T + P+S NV I ++G D I++KSG + I+ P +
Sbjct: 258 FINLSIENPFNAPNTDALDPESCKNVLILGDTFSVGDDCIAIKSG--KIDISKKNPVSSE 315
Query: 271 DVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIRQ 328
+++IR ++S G +V GSEMS G+ ++ +EK + G+ +T +GRG G I
Sbjct: 316 NINIRNCNMRSGHG-AVVLGSEMSSGLKSIFIEKCIFNATDRGLRIKTRRGRGSKGIIDN 374
Query: 329 IVISDAELYNINVAFGACGNCGSHPDDDFDP------------DALPAIDQITFKDIIGT 376
I + + ++ + F N DDD D P I I +D+ T
Sbjct: 375 IHMKNIKMDKVLTPFSI--NSFYFCDDDGKTEYVWSKEKLPVDDKTPYIGSIYVEDVTCT 432
Query: 377 NITIAGNFT-GIQEAPFANICLSNISLSINPGSYNSW 412
N + F G+ E + + N+S+S + + +
Sbjct: 433 NAHVCAAFMYGLPEQKIEKVSMKNVSVSFDENAKEDY 469
>gi|293370401|ref|ZP_06616955.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634549|gb|EFF53084.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 525
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 206/469 (43%), Gaps = 88/469 (18%)
Query: 8 LLLLALCSAILINGEVSDGQCD---DQPTLDP---RP----HSVSITEFGAVGDGKTLNT 57
LLLLA C A + + + D D P P RP + V+I +FGA +G TLNT
Sbjct: 16 LLLLASCQAYSDSEDKTIEMEDLYKDLPFSMPAIERPVFPDYQVNICDFGAKSNGVTLNT 75
Query: 58 LAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDV 117
A NAI K+ DKGG ++ +P G WLTG L S++ L EK A+I+ S + S + +
Sbjct: 76 EAINNAI---KAVHDKGGGKVVIPEGLWLTGPIVLQSNVNLHAEKNALIVFSSDTSLYPI 132
Query: 118 VDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG-------------------------- 151
+ + G+++ +R +S I+ ++ +TG
Sbjct: 133 I---TTSFEGLDV--KRCQSPISAMNAENIAITGYGVFDGAGDRWRPVKKDKMTDRQWKN 187
Query: 152 ---DNGTIDGQGSVWW-------------------------DWFSSQSLNYSRPHLVEFI 183
G +D G VW+ +W +S + RP L+ +
Sbjct: 188 LVNSGGKVDENGKVWYPNEGALKASVLMAGSEDKRTEITSEEWEDMKS--WLRPVLLSIV 245
Query: 184 SSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDC 243
S+ +++ +TF N+P++ +HP+ C ++ + ++ V P S + +S NV I +C
Sbjct: 246 KSKKILLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDVESCKNVLIANC 305
Query: 244 IIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVE 303
G DAI LKSG DE G G P +V +R + G V GSEMSGG+ NV V
Sbjct: 306 FFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGFV-IGSEMSGGVKNVYVS 364
Query: 304 KIHLYDSLNGIEFRTTKGRGGYIR---------QIVISDAELYNINVAFGACGNCGSHPD 354
+ + G+ F++ +GRGG + + +DA + ++ + A + P
Sbjct: 365 ECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADL---YYAVKSAPGEPV 421
Query: 355 DDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
+ PA I D+ A G+ E P NI + N+ ++
Sbjct: 422 PSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVVT 469
>gi|86141409|ref|ZP_01059955.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
gi|85831968|gb|EAQ50423.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
Length = 453
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 187/403 (46%), Gaps = 45/403 (11%)
Query: 32 PTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFN 91
P + P + IT+FGA + K NT A AI + A G + +P G+WLTG +
Sbjct: 42 PNFENAPRLL-ITDFGADPNNKKKNTEAIAAAIDSAHAIA---GGTVVIPKGEWLTGKIH 97
Query: 92 LTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG 151
S++ L LE+GA +L S++P D + + S G+E Y LI Y ++ +TG
Sbjct: 98 FKSNVNLHLEEGATLLFSEDPQ--DYLPAVLSTWEGMEC--YNYSPLIYAYECENIAITG 153
Query: 152 DNGTIDGQGSVWWDWFS------------------------SQSLNYS---RPHLVEFIS 184
G + + W WF+ Q +N S RP ++F
Sbjct: 154 -KGKLKAKMDTWEVWFARPSGHMQNLKRLYEMASKDIPVEERQMVNDSANFRPQFIQFNR 212
Query: 185 SENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCI 244
S+++++ + N+P + IHP S+V I+ ++V A + G+ P+ S NV IE+C+
Sbjct: 213 SKHILLEGIAIENSPFWVIHPYLSSDVIIREVNVFAHGHN--NDGVDPEMSQNVLIENCV 270
Query: 245 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 304
G DAI++K+G ++ P ++ IR +++ +A GSE+SGG+ NV +
Sbjct: 271 FDQGDDAIAVKAGRNQDAWRLNTPVKNIVIRDCSVKNGH-QLLAIGSELSGGVENVYMGN 329
Query: 305 IHLY--DSLNGIEF-RTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP-- 359
+ LN + F +T + RGGY++ I + D + I+ + D P
Sbjct: 330 CEVAPNAKLNHLLFIKTNERRGGYVKNIYMEDIKAGRIDKGILGIETDVLYQWRDLVPTY 389
Query: 360 -DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS 401
L I+Q+ +I N+ G +EAP NI L ++
Sbjct: 390 ERRLTQIEQVNMTNIKAANVDFVSRILGEEEAPVQNISLRKVT 432
>gi|371776320|ref|ZP_09482642.1| glycoside hydrolase family protein [Anaerophaga sp. HS1]
Length = 463
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 184/410 (44%), Gaps = 54/410 (13%)
Query: 27 QCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWL 86
+CDD SIT+FGAV K T + + + +D GG ++ +P+G+W
Sbjct: 56 ECDD----------FSITDFGAVEKEKISTT---KAISQAIAAASDAGGGRVIIPAGEWF 102
Query: 87 TGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRD 146
+G +L S++ L L +GA++ S +P D + + + GIE Y LI Y +
Sbjct: 103 SGKIHLKSNVNLHLSEGAILTFSGDPQ--DYLPAVHTTWEGIECYN--YSPLIYAYKCEN 158
Query: 147 VVVTGDNGTIDGQGSVWWDWFSS---------------------------QSLNYSRPHL 179
V +TG G + + VW WF+ ++ RP
Sbjct: 159 VAITGA-GQLKAEMGVWKRWFARPPAHMNSLKKLYHMAAKGVAVQERVMVNDTSHLRPQF 217
Query: 180 VEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVC 239
++F +NV + +T +N+P + IHP C NV I+N+ V+A + G+ P+ +NV
Sbjct: 218 IQFNRCKNVRMEGVTIINSPFWVIHPYMCHNVVIRNVKVYAHGHN--NDGVDPEMCENVL 275
Query: 240 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 299
IEDC+ G DAI++KSG ++ P+ ++ +R L+++ +A GSE+SGG+ N
Sbjct: 276 IEDCVFDQGDDAIAIKSGRNQDAWRLNTPSRNIVVRNCLVKNGH-QLLAIGSELSGGVEN 334
Query: 300 VQVEKIHLYDS---LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDD 356
V +E + ++ + + +T + RGGY++ + + + ++ + D
Sbjct: 335 VFLENCTVEENARMFHLVFIKTNERRGGYVKNVYVRNVTADKMSQGILGIDTDVLYQWRD 394
Query: 357 FDP---DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
P L I + DI + P NI L NI +
Sbjct: 395 LVPTYEKRLTPISDVYLTDIKANKVNFLSRILAQDALPVKNIRLKNIRVE 444
>gi|383114359|ref|ZP_09935123.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
gi|313693935|gb|EFS30770.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
Length = 524
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 188/428 (43%), Gaps = 78/428 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA DG TLNT A AI K DKGG ++ +P G WLTG L S++ L
Sbjct: 56 YQVNICDFGAKSDGVTLNTEAINKAI---KVVHDKGGGKVIIPEGLWLTGPIVLQSNVNL 112
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG------- 151
EK A+I+ S + S + ++ + G++ RR +S I+ + ++ +TG
Sbjct: 113 HAEKNALIVFSGDTSLYPII---TTSFEGLDT--RRCQSPISAMNVENIAITGYGVFDGA 167
Query: 152 ----------------------DNGTIDGQGSVWW------------------------- 164
G +D G VW+
Sbjct: 168 GDRWRPVKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITSE 227
Query: 165 DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES 224
+W +S + RP L+ + S+ V++ +TF N+P++ +HP+ C ++ + ++ V P S
Sbjct: 228 EWEEMKS--WLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYS 285
Query: 225 PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSG 284
+ +S NV I +C G DAI LKSG DE G G P +V +R + G
Sbjct: 286 QNGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHG 345
Query: 285 SSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR---------QIVISDAE 335
V GSEMSGG+ NV V + + G+ F++ +GRGG + + +DA
Sbjct: 346 GFV-IGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDAL 404
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
+ ++ + A + P + PA I D+ A G+ E P NI
Sbjct: 405 IADL---YYAAKSAPGEPIPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENI 460
Query: 396 CLSNISLS 403
+ N+ ++
Sbjct: 461 SIKNMVVT 468
>gi|448581096|ref|ZP_21645086.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
gi|445733858|gb|ELZ85418.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
Length = 512
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 176/387 (45%), Gaps = 38/387 (9%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++ ++G + D +L+T A Q A L A +GG ++Y+P G + + + T L
Sbjct: 7 NVRDYG-IDDDDSLDTAAIQAA---LDDCAGEGG-EVYLPPGTYRSAPLRVGDDTTFRLA 61
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GA + Q+ + + V+ S G + G + ++ +V +TG+ G IDG GS
Sbjct: 62 NGAELRFVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADASNVTITGE-GVIDGGGS 115
Query: 162 VWWDWFSSQSLNYS------------------------RPHLVEFISSENVVVSNLTFLN 197
WW++ S Y RP L++ ENV VS +T N
Sbjct: 116 YWWEFVSLPPEEYPAELAERLEEIRRGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRN 175
Query: 198 APAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSG 257
+P +N H VY +V I ++S+ PP++P GI DSS V + D I G DAI LKSG
Sbjct: 176 SPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSG 235
Query: 258 WDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFR 317
DE G GRPT +V + ++ G V GSE +G + +V V D+ GI +
Sbjct: 236 KDEQGREVGRPTENVVVTNCTVEHGHG-GVVIGSETAGDVRHVTVTNCTFTDTDRGIRIK 294
Query: 318 TTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIG 375
+ +GRGG + + + + F G + D + +P +A P + + F I
Sbjct: 295 SKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDIDSEPEPVTEATPNVRNVDFHHITA 354
Query: 376 TNITIAGNFTGIQEAPFANICLSNISL 402
+ A G+ E F I +++ +
Sbjct: 355 EEVESAAFLAGLPEQRFEGISFTDVDI 381
>gi|423212244|ref|ZP_17198773.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
gi|392695132|gb|EIY88357.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
Length = 539
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 199/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA GDG LNT A +AI K +GG ++ +P G WLTG L S++ L
Sbjct: 58 YEVNIEKFGAKGDGLFLNTKAINDAI---KEVNQRGGGKVIIPEGIWLTGPIELLSNVNL 114
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ A++L + + + ++ + G+E RR +S I+ ++ +TG GT DG
Sbjct: 115 YTEQNALVLFTGDFEAYPII---ATSFEGLET--RRCQSPISARNAENIAITG-YGTFDG 168
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W W+ + + +N
Sbjct: 169 NGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTD 228
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ + S+ V++ +TF N+P++ +HP+ C + + N+ V P S
Sbjct: 229 EEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNVMVINPWYSQ 288
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
I +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 289 NGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGG 348
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 349 FVV-GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLL 407
Query: 339 INVAFGACGNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G ++D ++P + + T F++I +NI G+ F G+
Sbjct: 408 FDLFYGGKG-AGEESEEDLLNRMKTSIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 466
Query: 389 EAPFANICLSNISLS 403
E P +NI + N+ ++
Sbjct: 467 EMPISNITVKNVVMT 481
>gi|288541509|gb|ADC45581.1| glycoside hydrolase [Streptomyces nanchangensis]
Length = 433
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 172/363 (47%), Gaps = 57/363 (15%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
+P PR + +IT +GAVGDG+ +NT AF+ AI + GG + VP G++LTG+
Sbjct: 9 RPPAFPR-RTFTITHYGAVGDGQKMNTEAFRAAI---AACHRAGGGHVLVPEGRFLTGAI 64
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
+L S + L + +GA I S +P D + + + G E Y I Y R+V VT
Sbjct: 65 HLRSGVDLHVTEGATIAFSPDPR--DFLPVVFTRWEGTEC--YNYSPFIYAYGERNVAVT 120
Query: 151 GDNGTIDGQGSV--WWDWFSS-------QSL-------------------NYSRPHLVEF 182
G GT+DGQ + W W+ S QSL +Y RP +V+F
Sbjct: 121 GP-GTLDGQARLGPWESWYRSSGPQGPDQSLLRRMGSAGVPVAERVFGDGHYLRPKMVQF 179
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
NV+VS LT ++ P + +HPV +NV +++I+V + + T G P+ +V I
Sbjct: 180 YRCRNVLVSGLTIVDPPMWTVHPVLSTNVTVRDITVDSTLYN--TDGCDPECCSDVLITG 237
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQV 302
C D +++KSG DE G G P+ ++ +R G + GSEMSGG+ +V
Sbjct: 238 CRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCWFSGRWG-GMTVGSEMSGGVRDVFA 296
Query: 303 EKIHL--------YDSLNGIEFRTTKGRGGYIR---------QIVISDAELYNINVAFGA 345
E + Y + + + +K RGGYI Q V DA N+N G
Sbjct: 297 ENCEINSPDFPGRYPVKHALYVKASKKRGGYIDGVHIRNFTGQSVERDAVFVNMNYNGGE 356
Query: 346 CGN 348
G
Sbjct: 357 GGT 359
>gi|336414787|ref|ZP_08595131.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
gi|335942157|gb|EGN04005.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
Length = 529
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 199/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA GDG LNT A +AI K GG ++ +P G WLTG L S++ L
Sbjct: 48 YEVNIEKFGAKGDGLFLNTKAINDAI---KDVNQHGGGKVIIPEGIWLTGPIELLSNVNL 104
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ A++L + + + ++ + G+E RR +S I+ ++ +TG +GT DG
Sbjct: 105 YTEQNALVLFTGDFEAYPII---ATSFEGLET--RRCQSPISARNAENIAITG-HGTFDG 158
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W W+ + + +N
Sbjct: 159 NGDCWRPVKKGKLTASQWKKLVKSGGVLDEKQEVWYPTAGSLKGAMACKDFNVPEGINTD 218
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ + S+ V++ +TF N+P++ +HP+ C + + NI V P S
Sbjct: 219 EEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQ 278
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
I +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 279 NGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGG 338
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 339 FVV-GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLL 397
Query: 339 INVAFGACGNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G ++D ++P + + T F++I +NI G+ F G+
Sbjct: 398 FDLFYGGKG-AGEESEEDLLNRMKTSIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 456
Query: 389 EAPFANICLSNISLS 403
E P +NI + N+ ++
Sbjct: 457 EMPISNITVKNVVMT 471
>gi|448567657|ref|ZP_21637582.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
gi|445711655|gb|ELZ63445.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
Length = 549
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 175/387 (45%), Gaps = 38/387 (9%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++ ++G + D +L+T A Q A L A +GG ++Y+P G + + + T L
Sbjct: 44 NVRDYG-IEDDDSLDTAAIQAA---LDDCAGEGG-EVYLPPGTYRSAPLRVGDDTTFRLA 98
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GA + Q+ + + V+ S G + G + ++ +V +TG+ G IDG GS
Sbjct: 99 NGAELRFVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADASNVTITGE-GIIDGGGS 152
Query: 162 VWWDWFSSQSLNYS------------------------RPHLVEFISSENVVVSNLTFLN 197
WW++ S Y RP L++ ENV VS +T N
Sbjct: 153 YWWEFVSLPPEQYPSELAARLEEIRSGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRN 212
Query: 198 APAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSG 257
+P +N H VY +V I ++S+ PP++P GI DSS V + D I G DAI LKSG
Sbjct: 213 SPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSG 272
Query: 258 WDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFR 317
DE G GRPT +V + ++ G V GSE +G + +V V D+ GI +
Sbjct: 273 KDEQGREVGRPTENVVVTNCTVEHGHG-GVVIGSETAGDVRHVTVTNCTFTDTDRGIRIK 331
Query: 318 TTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIG 375
+ +GRGG + + + + F G + D D P +A P + + F I
Sbjct: 332 SKRGRGGTVEDLRFDTIIMRRVACPFVINGYYQTDIDSDPKPVTEATPNVRNVDFHHITA 391
Query: 376 TNITIAGNFTGIQEAPFANICLSNISL 402
+ A G+ E F I +++ +
Sbjct: 392 EEVESAAFLAGLPEQRFEGISFTDVDI 418
>gi|448540079|ref|ZP_21623316.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|448552184|ref|ZP_21629848.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|448553851|ref|ZP_21630729.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
gi|445709350|gb|ELZ61181.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|445709953|gb|ELZ61776.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|445719854|gb|ELZ71532.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
Length = 516
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 174/387 (44%), Gaps = 38/387 (9%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++ ++G DG +L+T A Q A L A GG ++Y+P G + + + T L
Sbjct: 7 NVRDYGIDDDG-SLDTAAIQAA---LDDCAGTGG-EVYLPPGTYRSAPLRVGDDTTFRLA 61
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GA + Q+ + + V+ S G G + ++ +V +TG+ G IDG GS
Sbjct: 62 NGAELRFVQDFTEFPTVE---SRWEGWNQDG--FHPCLHVADAANVTITGE-GVIDGGGS 115
Query: 162 VWWDWFSSQSLNYS------------------------RPHLVEFISSENVVVSNLTFLN 197
WW++ S Y RP L++ ENV VS +T N
Sbjct: 116 YWWEFVSVPPEQYPSELTERLEAIRSGNKQDAVSTFTVRPPLLQIDGCENVTVSGVTLRN 175
Query: 198 APAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSG 257
+P +N H VY +V I ++S+ PP++P GI DSS V + D I G DAI LKSG
Sbjct: 176 SPFWNTHVVYSDDVTIHDVSIRNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSG 235
Query: 258 WDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFR 317
DE G GRPT +V + ++ G V GSE +G + +V V D+ GI +
Sbjct: 236 KDEEGREVGRPTENVVVTNCTVEHGHG-GVVIGSETAGDVRHVTVTNCTFTDTDRGIRIK 294
Query: 318 TTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIG 375
+ +GRGG + + + + F G + D D +P +A P + + F I
Sbjct: 295 SKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDIDSDPEPVTEATPNVRNVDFHHITA 354
Query: 376 TNITIAGNFTGIQEAPFANICLSNISL 402
+ A G+ E F I +++ +
Sbjct: 355 EEVESAAFLAGLPEQRFEGISFTDVDI 381
>gi|237717974|ref|ZP_04548455.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229452776|gb|EEO58567.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 524
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 187/428 (43%), Gaps = 78/428 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA DG TLNT A AI K DKGG ++ +P G WLTG L S++ L
Sbjct: 56 YQVNICDFGAKSDGVTLNTEAINKAI---KVVHDKGGGKVIIPEGLWLTGPIVLQSNVNL 112
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG------- 151
EK A+I+ S + S + ++ + G++ RR +S I+ ++ +TG
Sbjct: 113 HAEKNALIVFSGDTSLYPII---TTSFEGLDT--RRCQSPISAMNAENIAITGYGVFDGA 167
Query: 152 ----------------------DNGTIDGQGSVWW------------------------- 164
G +D G VW+
Sbjct: 168 GDRWRPVKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITSE 227
Query: 165 DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES 224
+W +S + RP L+ + S+ V++ +TF N+P++ +HP+ C ++ + ++ V P S
Sbjct: 228 EWEEMKS--WLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYS 285
Query: 225 PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSG 284
+ +S NV I +C G DAI LKSG DE G G P +V +R + G
Sbjct: 286 QNGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHG 345
Query: 285 SSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR---------QIVISDAE 335
V GSEMSGG+ NV V + + G+ F++ +GRGG + + +DA
Sbjct: 346 GFV-IGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDAL 404
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
+ ++ + A + P + PA I D+ A G+ E P NI
Sbjct: 405 IADL---YYAAKSAPGEPIPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENI 460
Query: 396 CLSNISLS 403
+ N+ ++
Sbjct: 461 SIKNMVVT 468
>gi|423288978|ref|ZP_17267829.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|423294865|ref|ZP_17272992.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
gi|392668742|gb|EIY62236.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|392676056|gb|EIY69497.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
Length = 524
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 187/428 (43%), Gaps = 78/428 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA DG TLNT A AI K DKGG ++ +P G WLTG L S++ L
Sbjct: 56 YQVNICDFGAKSDGVTLNTEAINKAI---KVVHDKGGGKVIIPEGLWLTGPIVLQSNVNL 112
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG------- 151
EK A+I+ S + S + ++ + G++ RR +S I+ ++ +TG
Sbjct: 113 HAEKNALIVFSGDTSLYPII---TTSFEGLDT--RRCQSPISAMNAENIAITGYGVFDGA 167
Query: 152 ----------------------DNGTIDGQGSVWW------------------------- 164
G +D G VW+
Sbjct: 168 GDRWRPVKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITSE 227
Query: 165 DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES 224
+W +S + RP L+ + S+ V++ +TF N+P++ +HP+ C ++ + ++ V P S
Sbjct: 228 EWEEMKS--WLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYS 285
Query: 225 PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSG 284
+ +S NV I +C G DAI LKSG DE G G P +V +R + G
Sbjct: 286 QNGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHG 345
Query: 285 SSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR---------QIVISDAE 335
V GSEMSGG+ NV V + + G+ F++ +GRGG + + +DA
Sbjct: 346 GFV-IGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDAL 404
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
+ ++ + A + P + PA I D+ A G+ E P NI
Sbjct: 405 IADL---YYAAKSAPGEPIPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENI 460
Query: 396 CLSNISLS 403
+ N+ ++
Sbjct: 461 SIKNMVVT 468
>gi|160886912|ref|ZP_02067915.1| hypothetical protein BACOVA_04926 [Bacteroides ovatus ATCC 8483]
gi|156107323|gb|EDO09068.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 518
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 187/428 (43%), Gaps = 78/428 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA DG TLNT A AI K DKGG ++ +P G WLTG L S++ L
Sbjct: 50 YQVNICDFGAKSDGVTLNTEAINKAI---KVVHDKGGGKVIIPEGLWLTGPIVLQSNVNL 106
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG------- 151
EK A+I+ S + S + ++ + G++ RR +S I+ ++ +TG
Sbjct: 107 HAEKNALIVFSGDTSLYPII---TTSFEGLDT--RRCQSPISAMNAENIAITGYGVFDGA 161
Query: 152 ----------------------DNGTIDGQGSVWW------------------------- 164
G +D G VW+
Sbjct: 162 GDRWRPVKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITSE 221
Query: 165 DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES 224
+W +S + RP L+ + S+ V++ +TF N+P++ +HP+ C ++ + ++ V P S
Sbjct: 222 EWEEMKS--WLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYS 279
Query: 225 PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSG 284
+ +S NV I +C G DAI LKSG DE G G P +V +R + G
Sbjct: 280 QNGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHG 339
Query: 285 SSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR---------QIVISDAE 335
V GSEMSGG+ NV V + + G+ F++ +GRGG + + +DA
Sbjct: 340 GFV-IGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDAL 398
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
+ ++ + A + P + PA I D+ A G+ E P NI
Sbjct: 399 IADL---YYAAKSAPGEPIPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENI 454
Query: 396 CLSNISLS 403
+ N+ ++
Sbjct: 455 SIKNMVVT 462
>gi|404484304|ref|ZP_11019517.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
gi|404342621|gb|EJZ68992.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
Length = 526
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 191/389 (49%), Gaps = 32/389 (8%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+++ +FGA GDG +++ Q AI + K G +Y+P GK+L L S++ L++
Sbjct: 83 LNVKDFGAAGDGVKTDSVCIQAAI----NACPKDGT-VYIPKGKYLCTPVFLKSNIDLWI 137
Query: 101 EKGAVILGSQNPSHWDVV-------DPLPSYGRGIEL--PGRRYKSLINGYMLRDVVVTG 151
+K A+++G ++ + ++ D Y G P + +LI G + +V++ G
Sbjct: 138 DKDAILIGEKDRKKYPILPGMTQSSDENDEYNIGSWEGNPLDCFAALITGISVENVLIFG 197
Query: 152 DNGTIDGQGSV--WWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
+ G +DG + WW +++ + RP+ V + +N+ + L +N+P++ +HP Y
Sbjct: 198 E-GILDGNAGMLDWWKDAKKKNIAW-RPNTVFLHNCKNIAMQGLCIMNSPSWTVHPYYSD 255
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
N+ N ++ P SP T G+ P+S +NV I I++G D +++KSG + + +P
Sbjct: 256 NLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPA 315
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIR 327
++ IR + + G SV GSE++ G+ +V VEK + G+ +T +GRG +
Sbjct: 316 KNIVIRNSIFRKGHG-SVTIGSEVAAGVYDVSVEKCIFEGTDRGLRIKTRRGRGEKSVLD 374
Query: 328 QIVISDAELYNINVAFGACGNCGSHPDDDFD----------PDALPAIDQITFKDIIGTN 377
I + + ++ + F A PD D + P I +I +DI N
Sbjct: 375 NICFENIIMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRCEN 434
Query: 378 IT-IAGNFTGIQEAPFANICLSNISLSIN 405
+ I G+ E P I L NI+L+ +
Sbjct: 435 VKNIFACLYGLPEMPVEEIVLENITLNFD 463
>gi|375150362|ref|YP_005012803.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
gi|361064408|gb|AEW03400.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
Length = 532
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 180/379 (47%), Gaps = 57/379 (15%)
Query: 8 LLLLALCSAILINGEVSDGQCDDQPTLDP---RPHSVSITEFGAVGDGKTLNTLAFQNAI 64
+ LLA+ ++I + + ++ P + + ++SIT+FGA DG TLNT A I
Sbjct: 4 IALLAIATSITLYTQAQTYSWNNLPKVTLPTFKKDTLSITQFGAKSDGLTLNTEAINKTI 63
Query: 65 FYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSY 124
++ + +GG + +P G WLTG L S++ L++ + A+I + + + + +++
Sbjct: 64 ---EACSKQGGGVVLIPQGIWLTGPIVLKSNVNLYVSRAALIQFTADKTQYPLIETYFEG 120
Query: 125 GRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVW------------WD------- 165
+ + R ++ I+G L +V +TGD G IDG G +W W
Sbjct: 121 KKAV-----RNQAPISGTDLENVAITGD-GVIDGNGDIWRMVKKDKVTEGEWKKLTASGG 174
Query: 166 --------WFSSQSL-----------------NYSRPHLVEFISSENVVVSNLTFLNAPA 200
W+ S++ +Y RP++V + V++ N TF N+P
Sbjct: 175 VVTADGRSWYPSEAYMKAETEKGPKTDYAAIKDYLRPNMVVLRNCRKVLLQNTTFQNSPC 234
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+N+H +YC + + + V P + G+ +S V +++ + G D I +KSG DE
Sbjct: 235 WNLHMLYCEQLTLDGVRVRNLPSAQNGDGMDIESCSYVEVKNSTLDCGDDGICIKSGKDE 294
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G G+ + ++I ++ + G V GSEMSGG ++ V + G+ F+T +
Sbjct: 295 EGRKAGKASQYIYIHDNVVYKAHGGFV-IGSEMSGGAHDIFVTNCSFIGTDVGLRFKTQR 353
Query: 321 GRGGYIRQIVISDAELYNI 339
GRGG + I I + + +I
Sbjct: 354 GRGGVVENIYIKNISMRDI 372
>gi|419720997|ref|ZP_14248200.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
gi|383302819|gb|EIC94301.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
Length = 526
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 192/389 (49%), Gaps = 32/389 (8%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+++ +FGA+GDG L++ Q AI + K G +Y+P GK+L L S++ +++
Sbjct: 83 LNVKDFGALGDGSGLDSGYIQAAI----NACPKDGT-VYIPKGKYLCTPVFLKSNIDIWI 137
Query: 101 EKGAVILGSQNPSHWDVV-------DPLPSYGRGIEL--PGRRYKSLINGYMLRDVVVTG 151
+K A+++G ++ + ++ D Y G P + +LI G + +V + G
Sbjct: 138 DKDAILIGEKDRKKYPILPGMIESSDEKKEYNIGSWEGNPLDCFAALITGISVENVHIYG 197
Query: 152 DNGTIDGQGSV--WWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
+ G +DG S+ WW +++ + RP+ V + +N+ + L +N+P++ +HP Y
Sbjct: 198 E-GILDGNASMLDWWKDAKKKNIAW-RPNTVFLHNCKNIAMQGLCIMNSPSWTVHPYYSD 255
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
N+ N ++ P SP T G+ P+S +NV I I++G D +++KSG + + +P
Sbjct: 256 NLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPA 315
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIR 327
++ IR + + G SV GSE++ G+ +V VEK + G+ +T +GRG +
Sbjct: 316 KNIVIRNSIFRKGHG-SVTIGSEVAAGVYDVSVEKCIFEGTDRGLRIKTRRGRGEKSVLD 374
Query: 328 QIVISDAELYNINVAFGACGNCGSHPDDDFD----------PDALPAIDQITFKDIIGTN 377
I + + ++ + F A PD D + P I +I +DI N
Sbjct: 375 NICFENILMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRCEN 434
Query: 378 IT-IAGNFTGIQEAPFANICLSNISLSIN 405
+ I G+ E P I L NI+L+ +
Sbjct: 435 VKNIFACLYGLPEMPVEEIVLENITLNFD 463
>gi|167521696|ref|XP_001745186.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776144|gb|EDQ89764.1| predicted protein [Monosiga brevicollis MX1]
Length = 945
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 198/441 (44%), Gaps = 75/441 (17%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVP--SGKWLTGSFNLTSHLTLFL 100
++++GA D K+++T A Q AI S +GG L P G +LTGS L S++ +
Sbjct: 523 VSDYGARDDNKSISTHAIQTAIEAC-SRCPEGGHVLLRPLDKGIYLTGSLFLKSNIIFEV 581
Query: 101 EKGAVILGSQNPS--HWDVVDPLPSYGRGIELPGRRYKSLING---YMLRDVVVTGDN-- 153
G +LG+ N S HW + Y R + +L+N TGD
Sbjct: 582 TAGVRLLGTANKSTVHWPQI-----YRRNAGVLELSRAALLNAGTCLTFHSTNQTGDQCA 636
Query: 154 -------------GTIDGQGSVWWDWFSSQSLNYS---RPHLVEFISSENVVVSNLTFLN 197
GTIDG G + W+ LN S RP L+ + + + +S+LT +
Sbjct: 637 EWSRYSNITITGAGTIDGNG--FSGWYLPPYLNGSFTNRPMLIAPMWVDGLYLSDLTLTD 694
Query: 198 APAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSG 257
+ + P +C NVHI ++ + P T G+ PDS NV +E C I+ G D I++KSG
Sbjct: 695 PAFWTVAPAFCKNVHIHDLRIIT--SGPNTDGVDPDSCQNVLVERCYISTGDDCIAIKSG 752
Query: 258 WDEYGIAYGRPTTDVHIR-----------------------RVLLQSSSGSSVAFGSEMS 294
+A PT +V IR ++ ++G ++ GSEMS
Sbjct: 753 RGPQALAINMPTANVTIRHVPQRVGRDYDATAIGSYALCRGQIRTDCTTGHGISIGSEMS 812
Query: 295 GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPD 354
GGI +V + + L + NG+ +T GRGG +R + + + +++ A +
Sbjct: 813 GGIYDVLFDNLTLSGTTNGVRVKTCMGRGGSVRNVTYRNMVIDSVDTAVLI--------N 864
Query: 355 DDFDP-----DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSY 409
D++ DALP I +++I N+ +A +Q+ A + N++++
Sbjct: 865 QDYNSVTCVGDALPNFSDILVQNVIANNVKMAFELECLQDNSCAGLRFENVTVT---AFQ 921
Query: 410 NSWECSNIHGS-SESVFPEPC 429
N+ +C+++ +V P PC
Sbjct: 922 NASKCAHVQPEIGPNVSPVPC 942
>gi|374376429|ref|ZP_09634087.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233269|gb|EHP53064.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 517
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 184/406 (45%), Gaps = 62/406 (15%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
+T++GA + T A + I + +Y P+GK+LTG +L S++T+ ++
Sbjct: 25 VTKYGAKKNSSIKATKAIEKTITAAAAAGG---GTVYFPAGKYLTGPIHLKSNITILIDA 81
Query: 103 GAVILGSQNPSHWDVVDPLP---SYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
GA + S D D LP S G+++ + L + ++ +TG G IDG
Sbjct: 82 GAELHFSD-----DFDDYLPMVESRYEGVDVTS--FSPLFYANGVENIAITG-RGVIDGH 133
Query: 160 GSVWWDW----------------FSSQSLN-------------YSRPHLVEFISSENVVV 190
G WWD+ F ++ N + RP ++F+ S+N+++
Sbjct: 134 GKKWWDFVEGYKEGQPRTKWQLEFDRRNKNILLPDDPRQMKRGFLRPPFIQFLHSKNILI 193
Query: 191 SNLTFLNAPAYNIHPVYCSNVHIQNISVHAP-PESPYTVGIVPDSSDNVCIEDCIIAMGH 249
+ N+P + I+P +C NV + ++++ P +P T GI P+S NV I DC I++G
Sbjct: 194 EGIMIRNSPFWTINPGFCENVTVHAVTINNPGSNAPNTDGINPESCSNVHISDCHISVGD 253
Query: 250 DAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYD 309
D I++KSG D G + RP + I + G V GSEMSGG+ + +
Sbjct: 254 DCITIKSGKDIPGRSKNRPAENYTITNCTMLRGHG-GVVIGSEMSGGVKKIAISNCIFDG 312
Query: 310 SLNGIEFRTTKGRGGYIRQIVISDAELYNIN----VAFGACGNCGSHPDDDFDPDALPAI 365
+ GI +T +GRGG + I +S+ + NI V P + P
Sbjct: 313 TDRGIRIKTARGRGGVVEDIRVSNIVMKNIAEQAIVLDMEYAKGAEEPVSERTP------ 366
Query: 366 DQITFKDIIGTNITIAGN----FTGIQEAPFANICLSNISLSINPG 407
TF++I +NIT N GI+E P + I L+++ G
Sbjct: 367 ---TFRNIRLSNITAYTNQALLINGIREMPVSGISLNDVVFEARQG 409
>gi|302671860|ref|YP_003831820.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
gi|302396333|gb|ADL35238.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
Length = 524
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 188/393 (47%), Gaps = 38/393 (9%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+ +T FGA GDG T++T A Q A K G +Y+P G++L L S +TL+L
Sbjct: 81 LDVTAFGAKGDGVTMDTAAIQAA----ICACPKDGT-VYLPKGEYLVTPLFLKSDMTLWL 135
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIEL------------PGRRYKSLINGYMLRDVV 148
+KGAVILG + +H+ V LP R + P Y SLI +++
Sbjct: 136 DKGAVILGDTDRNHYPV---LPGMTRATDEKSEYNLGTWEGNPLNCYASLITAIDAQNLD 192
Query: 149 VTGDNGTIDGQG--SVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
+ G GTIDG S WW + + RP + + + V V N+ N+P + +HP
Sbjct: 193 IIGP-GTIDGNAGNSDWWVNAKVKRGAW-RPFAMYLVRCQKVRVQNVRVQNSPCWTVHPY 250
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y ++ N+ +H P +SP T G+ P+S NV + I++G D +++KSG + +
Sbjct: 251 YSDDLAFLNLYIHNPSDSPNTDGLDPESCKNVLVAGTTISVGDDCMAIKSGKFYMSMEHH 310
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--G 324
+ T ++ IR + G SV GSE++GG+ NV+V + + G+ +T +GRG
Sbjct: 311 KVTENIIIRNCRFERGHG-SVTVGSEVAGGVKNVRVTQCIFDGTDRGLRIKTRRGRGERS 369
Query: 325 YIRQIVISDAELYNINVAFGACGNCGSHPD--DDFDPDALPA-IDQIT--FKDIIGTNIT 379
+ I+ + ++ +++ F PD D+ + PA +D++T I G NI
Sbjct: 370 VLDDILFENIDMNGVHMPFTVNMFYFCDPDGHTDYVQNQEPAPVDEMTPAIGSITGRNIE 429
Query: 380 IAGN------FTGIQEAPFANICLSNISLSINP 406
G G+ E P + NI+ S P
Sbjct: 430 CKGASASIVCAVGLPERPIEKLVFENINASFLP 462
>gi|345013580|ref|YP_004815934.1| glycoside hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344039929|gb|AEM85654.1| glycoside hydrolase family 28 [Streptomyces violaceusniger Tu 4113]
Length = 484
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 163/339 (48%), Gaps = 48/339 (14%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
+P PR S IT++GAVGDG+T+NT AF+ I + GG Q+ VP G++LTG+
Sbjct: 59 RPPAFPR-RSFRITDYGAVGDGRTMNTAAFRATI---AACHRAGGGQVVVPEGRFLTGAI 114
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
+L S + L + GA I S +P D + + + G E Y I Y RDV VT
Sbjct: 115 HLRSRVNLHVTAGATIAFSPDPR--DFLPVVLTRWEGTEC--YNYSPFIYAYGARDVAVT 170
Query: 151 GDNGTIDGQGSV--WWDWF-------SSQSL-------------------NYSRPHLVEF 182
G GT+DGQ + W W+ + Q L + RP +V+F
Sbjct: 171 GP-GTLDGQARLGPWESWYRDSGPQGADQKLLREMGSTGAPVARRVFGDGHCLRPKMVQF 229
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
NV+VS+LT ++ P + +HPV SNV ++ ++V + + T G P+ +V I
Sbjct: 230 YRCRNVLVSDLTIVDPPMWTVHPVLSSNVTVRGVTVDSTLYN--TDGCDPECCSDVLITG 287
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQV 302
C D +++KSG DE G G P+ ++ +R G + GSEMSGG+ ++
Sbjct: 288 CRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCQFSGRWG-GMTVGSEMSGGVRDIFA 346
Query: 303 EKIHL--------YDSLNGIEFRTTKGRGGYIRQIVISD 333
E + Y + + + K RGG+I + I +
Sbjct: 347 ENCEINPPDFPGRYPVKHALYVKANKKRGGFIDGVHIRN 385
>gi|159040816|ref|YP_001540068.1| glycoside hydrolase [Caldivirga maquilingensis IC-167]
gi|157919651|gb|ABW01078.1| glycoside hydrolase family 28 [Caldivirga maquilingensis IC-167]
Length = 462
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 202/448 (45%), Gaps = 72/448 (16%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
P + ++ E+GA G +T A AI + A + +Y+P G +L+ + L S+
Sbjct: 6 PSGRTYNVVEYGADPKGLDDSTGAINEAI----TQASETRGIVYIPPGNYLSRNIILRSN 61
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
+ L ++KGAV+ S + + +++ + G+ G LI G +R+V + G+ G
Sbjct: 62 VMLLIDKGAVVKFSTDYKSYPIIE---TRREGVHHCG--VMPLIFGKDVRNVRIIGE-GV 115
Query: 156 IDGQGSVWW---------------------------DWFSSQSL---------------- 172
DGQG WW W+ +++
Sbjct: 116 FDGQGYAWWPIRRFRVTEDYWRRLVESGGVVGDDGKTWWPTRNAMEGAEAFRKITSEGGK 175
Query: 173 ----------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
+ RP L++ ++ENV + +TF ++P + IH +Y +V + N S AP
Sbjct: 176 PSTEDCERYREFFRPQLLQLYNAENVTIEGVTFKDSPMWTIHILYSRHVTLINTSSIAPD 235
Query: 223 ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS 282
SP T G+V DSS +V + C+I +G D + +KSG DE G G P+ ++H L++
Sbjct: 236 YSPNTDGVVVDSSSDVEVRGCMIDVGDDCLVIKSGRDEEGRRIGIPSENIHASGCLMKRG 295
Query: 283 SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA 342
G V GSEMSGG+ NV ++ + G+ +TT+GRGG I + +++ +Y N+
Sbjct: 296 HGGFV-IGSEMSGGVRNVSIQDSVFDGTERGVRIKTTRGRGGLIENVYVNN--IYMRNII 352
Query: 343 FGACGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 400
A + +P + P I + ++ A G+ E P +I + N
Sbjct: 353 HEAVVVDMFYEKRPVEPVSERTPKIRGVVIRNTSCDGADQAVLINGLPEMPIEDIIIENT 412
Query: 401 SLSINPGSY----NSWECSNIHGSSESV 424
++ N G + +S SN+ +S ++
Sbjct: 413 RITSNKGIHIENASSIRLSNVKVNSRAI 440
>gi|420156232|ref|ZP_14663077.1| pectate lyase family protein [Clostridium sp. MSTE9]
gi|394757879|gb|EJF40876.1| pectate lyase family protein [Clostridium sp. MSTE9]
Length = 511
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 185/389 (47%), Gaps = 42/389 (10%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++ I ++ A GDG +T A AI+ + + + P G++L L S + L+
Sbjct: 79 AIHIKDYNAAGDGIRNDTAAIHAAIY-----SAPPRSVVIFPRGEYLVEHLFLKSGVDLY 133
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIEL------------PGRRYKSLINGYMLRDV 147
LE+GAV+ QNP+ D + + Y + + P + SLI G ++ V
Sbjct: 134 LEEGAVL--RQNPNR-DALAIVKGYQKSYDYTDAVINASWEGNPLDCFCSLIYGKDVQQV 190
Query: 148 VVTGDNGTIDGQGSV--WWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHP 205
+ GD GT++G G WW+ ++ Y RP V ++ ++ V LT N+ A+NIHP
Sbjct: 191 RIYGD-GTLNGSGMEGGWWNEPKKKNRAY-RPRNVSLVNCSDITVCGLTSQNSAAWNIHP 248
Query: 206 VYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAY 265
+Y SN+ +++ + P+SP T G+ P+S +NV I C +G D I++KSG +
Sbjct: 249 LYSSNLAFYGLTIQSDPDSPNTDGLNPESCENVEIVGCRFQVGDDCIAIKSGKLFLSRRH 308
Query: 266 GRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG-- 323
RP+ + +RR L++ G V GSE+S G+ +V V+ + G +T +GRG
Sbjct: 309 LRPSRKITVRRCLMEEGHG-GVVIGSEISCGVQDVLVQNCLFRRTDRGFRIKTRRGRGST 367
Query: 324 GYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDAL------------PAIDQITFK 371
+ + S ++ ++ F N H D D D + PA+ IT
Sbjct: 368 SVVDGVRFSHVKMEQVSHCFVI--NMFYHCDPDGHSDLVQCKEALPVGAETPAVQNITLS 425
Query: 372 DIIGTNITIAGNFT-GIQEAPFANICLSN 399
DI I + F G+ E+P N+ + N
Sbjct: 426 DICADEIAGSAVFLYGLPESPIRNVTVKN 454
>gi|237721299|ref|ZP_04551780.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229449095|gb|EEO54886.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 539
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 199/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA GDG LNT A +AI K GG ++ +P G WLTG L S++ L
Sbjct: 58 YEVNIEKFGAKGDGLFLNTKAINDAI---KDVNQHGGGKVIIPEGIWLTGPIELLSNVNL 114
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ ++ A++L + + + ++ + G+E RR +S I+ ++ +TG +GT DG
Sbjct: 115 YTKQNALVLFTGDFEAYPII---ATSFEGLET--RRCQSPISARNAENIAITG-HGTFDG 168
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W W+ + + +N
Sbjct: 169 NGDCWRPVKKGKLTASQWKKLVKSGGVLDEKQEVWYPTAGSLKGAMACKDFNVPEGINTD 228
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ + S+ V++ +TF N+P++ +HP+ C + + NI V P S
Sbjct: 229 EEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQ 288
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
I +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 289 NGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGG 348
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 349 FVV-GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLL 407
Query: 339 INVAFGACGNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G ++D ++P + + T F++I +NI G+ F G+
Sbjct: 408 FDLFYGGKG-AGEESEEDLLNRMKTSIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 466
Query: 389 EAPFANICLSNISLS 403
E P +NI + N+ ++
Sbjct: 467 EMPISNITVKNVVMT 481
>gi|408672530|ref|YP_006872278.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
gi|387854154|gb|AFK02251.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
Length = 789
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 195/440 (44%), Gaps = 79/440 (17%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R + +I+ +GA DG T+NT A AI + GG + VP G W+TG L S++
Sbjct: 275 RKDTFNISRYGAKADGITVNTKAINQAIEICNA---AGGGTVLVPKGLWVTGPIVLKSNV 331
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
L LEKGA++ S+N + +V L ++ G E R ++ I G L ++ +TG+ G +
Sbjct: 332 NLHLEKGALLQFSKNYDDYPIV--LTTW-EGQE--SYRCQAPIWGVDLENIAITGE-GVL 385
Query: 157 DGQGSVW------------W---------------DWFSSQS------------------ 171
DG G W W +W+ S+
Sbjct: 386 DGGGDAWRAIKREKQTAGQWANLIKSGGVVDEKQNNWYPSEKSLKGNMIPNAGRILNGVK 445
Query: 172 ---------LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
++ RP+++ +N+++ +TF N+PA+ +HP+ C ++ ++N++V P
Sbjct: 446 PTPEELASYKDFLRPNMLSLTRCKNIIIEGVTFQNSPAWTMHPLLCEHITVKNVNVSNPW 505
Query: 223 ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS 282
+ + I +S N +E C + G D I++KSG DE G G PT + I+ ++ +
Sbjct: 506 YAQNSDAIDLESCRNGVLEGCTFSTGDDGITIKSGRDEQGRKRGVPTENFVIKDCIVYHA 565
Query: 283 SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI--- 339
G V GSEMSGG+ N+ + S G+ F+T +GRGG + I +++ + +I
Sbjct: 566 HGGFV-IGSEMSGGVRNMFISDCTFMGSDVGLRFKTARGRGGVVNNIYVNNINMTDIPGE 624
Query: 340 NVAFGACGNCGSHPDDDFDPDALPAIDQI-------TFKDIIGTNITIAGNFT-----GI 387
V F D + LP I FKD NI G T G+
Sbjct: 625 AVLFDMYYAAKDPVRADGKENELPVIKAEPLGEGTPQFKDFYIQNIVCKGAETAILIRGL 684
Query: 388 QEAPFANICLSNISLSINPG 407
E NI + N + N G
Sbjct: 685 PEMTIKNINIENAMIEANKG 704
>gi|329956871|ref|ZP_08297439.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523628|gb|EGF50720.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 522
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 200/436 (45%), Gaps = 75/436 (17%)
Query: 30 DQPTLDPRP----HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW 85
D P + RP + V I +FGA DG+TLNT A NAI K+ ++KGG ++ +P G W
Sbjct: 44 DMPVVQ-RPSFPDYQVDIRDFGAKADGETLNTEAINNAI---KAVSEKGGGKVVIPEGLW 99
Query: 86 LTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLR 145
LTG L +++ L +EK A++L S + + +V + G+++ R +S I+
Sbjct: 100 LTGPVVLQNNVNLHVEKNALVLFSGDADLYPLVR---TSFEGLDM--LRCQSPISAMNAE 154
Query: 146 DVVVTGDNGTIDGQGSVW------------WD---------------WFSSQSL------ 172
++ +TG +G +DG G W W W+ ++
Sbjct: 155 NIAITG-HGVLDGSGDSWRPVKRNKMTDGQWKSLLKSGGVVDESGKVWYPNEGALKASIL 213
Query: 173 ------------------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
+ RP L+ + S+ V++ +TF N+P++ +HP+ C ++ +
Sbjct: 214 TGSKEKREISDSEWEGMKRWLRPVLLSIVKSKRVLLEGVTFRNSPSWCLHPLSCEDLTLN 273
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
+ V P S + +S NV + + + G DAI +KSG + G G P +V +
Sbjct: 274 GVKVFNPWYSQNGDALDVESCKNVVVTNSLFDAGDDAICIKSGKNADGRRRGEPCENVLV 333
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
+ + G V GSEMSGG+ NV V + G+ F++T+GRGG + + + +
Sbjct: 334 KNNTVLHGHGGFVV-GSEMSGGVRNVYVADCTFIGTDVGLRFKSTRGRGGVVENVYVDNI 392
Query: 335 ELYNINVAFGACGNCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGI 387
+ IN+ A + D +PA+ + T FK+I +NI+ G G+
Sbjct: 393 NM--INIPGDALIADLYYAVKDAPGAPVPAVTEETPSFKNIHISNISCKGAGRAMFLNGL 450
Query: 388 QEAPFANICLSNISLS 403
E P N + N+ ++
Sbjct: 451 PEMPIENFSVRNMRIT 466
>gi|291514459|emb|CBK63669.1| Endopolygalacturonase [Alistipes shahii WAL 8301]
Length = 555
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 210/477 (44%), Gaps = 82/477 (17%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
++VS+ +FG GDG TLNT AF +A + + A +GG ++ VP G W TG L + L
Sbjct: 45 NTVSVADFGGSGDGHTLNTAAFADA---IAALAARGGGRVVVPEGVWYTGPIELKDNTEL 101
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LE+ AVI+ S + + + +V+ L R +S I+ +++V +TG G IDG
Sbjct: 102 HLEQNAVIVFSDDKTLYPLVETTFE-----GLNTLRCQSPISARGVKNVAITG-RGVIDG 155
Query: 159 QGSVW------------WD---------------WFSSQSLNYS---------------- 175
G W W W+ S+S +
Sbjct: 156 NGDAWRAVKQDKLNPRQWKTLVRSGGVLSDDGKTWYPSESYKFGATSGADQNVSTWAKTR 215
Query: 176 ----------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
RP ++ ENV++ + F N+P +NIHP C+N+ + +I+V P +
Sbjct: 216 ADFERMHDFLRPVMIAVHHCENVLLEGVIFQNSPCWNIHPAMCTNLIVNDITVRCPDYAQ 275
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
GI +S NV + + +G D I +KSG D+ G G P ++ + ++ G
Sbjct: 276 NGDGIDIESCRNVVLTNSRFDVGDDGICIKSGKDKAGRDRGIPCENILVDNCIVFHGHGG 335
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI------ 339
V GSEMSGG+ NV+V + G+ F++ +GRGG + I I D + NI
Sbjct: 336 FVV-GSEMSGGVRNVRVSNCTFSGTDVGLRFKSARGRGGVVENIWIEDIAMNNILQEPLL 394
Query: 340 -NVAFGACGNCGSHP---DDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQ 388
++ +G +H D + A +D+ T F+DI N+ G F G+
Sbjct: 395 FDLFYGGKSASEAHAEGGDAEVTDIAPKPVDETTPAFRDIHIRNVWCRGARRAMYFNGLP 454
Query: 389 EAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELE-NSSSNSSSTCF 444
E + + N + G+ + E S++ + PE P L N+ N S+ F
Sbjct: 455 EMNVERVTVENTQIYAVTGAQIN-ESSDVVLRGVKIIPEQGPALMLNNVKNLSAEGF 510
>gi|262408522|ref|ZP_06085068.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646518|ref|ZP_06724155.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|262353387|gb|EEZ02481.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638137|gb|EFF56518.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
Length = 539
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 198/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA GDG LNT A +AI K +GG ++ +P G WLTG L S++ L
Sbjct: 58 YEVNIEKFGAKGDGLFLNTKAINDAI---KEVNQRGGGKVIIPEGIWLTGPIELLSNVNL 114
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ A++L + + + ++ + G+E RR +S I+ ++ +TG GT DG
Sbjct: 115 YTEQNALVLFTGDFEAYPII---ATSFEGLET--RRCQSPISARNAENIAITG-YGTFDG 168
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W W+ + + +N
Sbjct: 169 NGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTD 228
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ + S+ V++ +TF N+P++ +HP+ C + + NI V P S
Sbjct: 229 EEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQ 288
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
I +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 289 NGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGG 348
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 349 FVV-GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLL 407
Query: 339 INVAFGACGNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G ++D ++P + + T F +I +NI G+ F G+
Sbjct: 408 FDLFYGGKG-AGEESEEDLLNRMKTSIPPVTEETPAFCNIHISNIVCRGSGRAMFFNGLP 466
Query: 389 EAPFANICLSNISLS 403
E P +NI + N+ ++
Sbjct: 467 EMPISNITVKNVVMT 481
>gi|282601137|ref|ZP_05980861.2| glycoside hydrolase, family 77 [Subdoligranulum variabile DSM
15176]
gi|282569962|gb|EFB75497.1| polygalacturonase (pectinase) [Subdoligranulum variabile DSM 15176]
Length = 531
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 176/367 (47%), Gaps = 55/367 (14%)
Query: 39 HSVSITE--FGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
H +++TE + A GDG T NT A Q AI A G +Y+P+G +LTG+ L S +
Sbjct: 113 HRINVTEAPYWAKGDGITKNTAALQRAID-----ACGPGDAVYLPAGTYLTGALQLHSDM 167
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLIN--------GYMLRDVV 148
L+LE+GAV+ G+ D +PS GIE R Y SL+N GY +VV
Sbjct: 168 ELYLEEGAVLQGTAQLV--DYQPRIPSRFEGIER--RCYSSLLNLGKMDHDDGYNCVNVV 223
Query: 149 VTGDNGTIDGQGSVWWDWFSSQSLNY------------------------SRPHLVEFIS 184
+ G GTI G G D + + RP LV +
Sbjct: 224 IRG-KGTIAGGGKALADAIIADEREHLKDYLAEHLDLVESCDEEDTIPGRVRPRLVNLSN 282
Query: 185 SENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT-VGIVPDSSDNVCIEDC 243
+NV +S LT ++P++ + +Y N+ + + H+ E + G PDSS N +
Sbjct: 283 CQNVWISGLTLKDSPSWILQMIYSDNIVTDHCAFHS--EGIWNGDGWDPDSSTNCTLFAS 340
Query: 244 IIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVE 303
+ G D++++KSG + G A GRP+ ++I + SG + GSEMSGG+ +VQ+
Sbjct: 341 ELYTGDDSVAIKSGKNPEGNAIGRPSAHIYI--FDCRVGSGQGLCIGSEMSGGVEDVQIW 398
Query: 304 KIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALP 363
L +S +G+E + T RGGY+R + + D + + + + + DD D +P
Sbjct: 399 DCDLENSFSGLEIKATAKRGGYVRGVTVRDCKAPRVMI------HAVPYNDDGEAADTVP 452
Query: 364 AIDQITF 370
++ TF
Sbjct: 453 VLEHFTF 459
>gi|294807547|ref|ZP_06766344.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345512393|ref|ZP_08791923.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
gi|294445248|gb|EFG13918.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345453872|gb|EEO50012.2| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
Length = 529
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 198/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA GDG LNT A +AI K +GG ++ +P G WLTG L S++ L
Sbjct: 48 YEVNIEKFGAKGDGLFLNTKAINDAI---KEVNQRGGGKVIIPEGIWLTGPIELLSNVNL 104
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ A++L + + + ++ + G+E RR +S I+ ++ +TG GT DG
Sbjct: 105 YTEQNALVLFTGDFEAYPII---ATSFEGLET--RRCQSPISARNAENIAITG-YGTFDG 158
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W W+ + + +N
Sbjct: 159 NGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTD 218
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ + S+ V++ +TF N+P++ +HP+ C + + NI V P S
Sbjct: 219 EEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQ 278
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
I +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 279 NGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGG 338
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 339 FVV-GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLL 397
Query: 339 INVAFGACGNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G ++D ++P + + T F +I +NI G+ F G+
Sbjct: 398 FDLFYGGKG-AGEESEEDLLNRMKTSIPPVTEETPAFCNIHISNIVCRGSGRAMFFNGLP 456
Query: 389 EAPFANICLSNISLS 403
E P +NI + N+ ++
Sbjct: 457 EMPISNITVKNVVMT 471
>gi|345301605|ref|YP_004821553.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
gi|345095542|gb|AEN67177.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 447
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 188/410 (45%), Gaps = 51/410 (12%)
Query: 48 AVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVIL 107
++ G T Q AI S GG + +P+G W++G L SH+TL L G+ +
Sbjct: 37 SIKSGDVTVTSVVQKAIDQCSS---NGGGIVTLPAGTWVSGPLTLKSHVTLHLAAGSTLK 93
Query: 108 GSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV-WWD- 165
+ NP D +P++ I P ++LI ++D+ +TG GTIDGQG WW
Sbjct: 94 STGNPD-----DFVPAF---ISQPTHPREALIIASHVQDIAITGP-GTIDGQGQKSWWSK 144
Query: 166 --------------WFSSQ------SLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHP 205
WF + RP L+EF + +S L +N+P +N+
Sbjct: 145 ASDAREHLKHGDVSWFEKNWKGIPPANGMPRPWLIEFDHVQGGNISQLHIINSPMWNLVL 204
Query: 206 VYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAY 265
N+ + S+ PP+SP T GI SS N+ + ++ G D I++KSG G A
Sbjct: 205 RNSENIDVSRSSIFNPPDSPNTDGIDVVSSKNISLRHLKLSTGDDDIAIKSGLASTGKA- 263
Query: 266 GRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGY 325
P+++++I + + G SV GSE + GI V ++ + + NG+ ++ + RG
Sbjct: 264 -PPSSNINIDDIDIYRGHGLSV--GSETANGIGRVTMQNVRFNGTDNGLRIKSGRDRGNQ 320
Query: 326 IRQIVISDAELYNINV------AFGACGNCGSHPDDDFDPDAL----PAIDQITFKDIIG 375
I I + + ++NV ++G G S A+ P I +T + +
Sbjct: 321 IGPISADNITMNHVNVPLVITDSYGGNGGYSSKSLTSIPTSAISSLTPFIHDVTIQHLTA 380
Query: 376 TNITIAGNFTGIQEAPFANICLSNISLSINPG---SYNSWECSNIHGSSE 422
TN +AG +G+ EAP NI L +I + G Y S E N+H +S+
Sbjct: 381 TNSGMAGIISGLPEAPLQNITLKDIHIDATHGLQSRYVSGEIKNVHVTSK 430
>gi|268317938|ref|YP_003291657.1| glycoside hydrolase [Rhodothermus marinus DSM 4252]
gi|345304218|ref|YP_004826120.1| polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
gi|262335472|gb|ACY49269.1| glycoside hydrolase family 28 [Rhodothermus marinus DSM 4252]
gi|345113451|gb|AEN74283.1| Polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
Length = 470
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 157/333 (47%), Gaps = 51/333 (15%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
+T +GAVGDG+T T AF+ AI ++ GG ++ VP G +LTG +L S++ L L+
Sbjct: 59 LTRYGAVGDGRTDCTDAFRQAI---EACHRAGGGRVVVPRGTFLTGPIHLASNVNLHLDD 115
Query: 103 GAVILGSQNPSHWDVVDPLP-SYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GA + Q+P+ + LP + R + G Y I + +V +TG +G +DGQ
Sbjct: 116 GATVRFKQDPAAY-----LPVVFTRWEGVEGMNYSPFIYAFGQENVAITG-SGVLDGQAD 169
Query: 162 V--WWDWFSSQSL----------------------------------NYSRPHLVEFISS 185
WW W + +Y RP+ ++F
Sbjct: 170 ENHWWPWKGRKEYGWREGMPTQDEARRRLFEMAEAGVPPEQRILGEGSYLRPNFIQFYRC 229
Query: 186 ENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCII 245
NV++ +T +N+P + IHPV C NV ++ ++V + P G P+S V IEDC+
Sbjct: 230 RNVLIEGVTIVNSPMWEIHPVLCENVTVRGVTVRS--HGPNNDGCNPESCRYVLIEDCLF 287
Query: 246 AMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKI 305
G D I++KSG + G P+ + IR ++ G V GSE+SGG ++ E+
Sbjct: 288 DTGDDCIAIKSGRNADGRRVNVPSAYIVIRNCKMRDGHG-GVVIGSEISGGAHHIYAERC 346
Query: 306 HLY--DSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ + + +T RGG I I + + E+
Sbjct: 347 EMSSPNLDRALRIKTNSVRGGLIEHIYMREVEV 379
>gi|292494258|ref|YP_003533401.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|448289466|ref|ZP_21480637.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|291369174|gb|ADE01404.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|445582547|gb|ELY36888.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
Length = 549
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 174/387 (44%), Gaps = 38/387 (9%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++ ++G + D +L+T A Q A L A +GG ++Y+P G + + + T L
Sbjct: 44 NVRDYG-IEDDDSLDTAAIQAA---LDDCAGEGG-EVYLPPGTYRSAPLRVGDDTTFRLA 98
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GA + Q+ + + V+ S G + G + ++ +V +TG+ G IDG GS
Sbjct: 99 NGAELRFVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADASNVTITGE-GVIDGGGS 152
Query: 162 VWWDWFSSQSLNYS------------------------RPHLVEFISSENVVVSNLTFLN 197
WW + S Y RP L++ ENV VS +T N
Sbjct: 153 YWWVFVSLPPEQYPSELAARLEEIRSGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRN 212
Query: 198 APAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSG 257
+P +N H VY +V I ++S+ PP++P GI DSS V + D I G DAI LKSG
Sbjct: 213 SPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSG 272
Query: 258 WDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFR 317
DE G GRPT +V + ++ G V GSE +G + +V V D+ GI +
Sbjct: 273 KDEQGREVGRPTENVVVTNCTVEHGHG-GVVIGSETAGDVRHVTVTNCTFTDTDRGIRIK 331
Query: 318 TTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIG 375
+ +GRGG + + + + F G + D D P +A P + + F I
Sbjct: 332 SKRGRGGTVEDLRFDTIIMRRVACPFVINGYYQTDIDSDPKPVTEATPNVRNVDFHHITA 391
Query: 376 TNITIAGNFTGIQEAPFANICLSNISL 402
+ A G+ E F I +++ +
Sbjct: 392 EEVESAAFLAGLPEQRFEGISFTDVDI 418
>gi|320106925|ref|YP_004182515.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319925446|gb|ADV82521.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 460
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 197/416 (47%), Gaps = 47/416 (11%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
+ + ++T FGA GDG TL++ A Q I A K G + +G +L+GS + S +
Sbjct: 28 KSKTFNVTNFGAKGDGITLDSPAIQRTI----DAAAKSGGTVVFRAGTYLSGSIFVKSGV 83
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIEL--PGRRYKSLINGYMLRDVVVTGDNG 154
TL ++KG ILGSQ S + + +P+ GIE+ P +L+N Y ++ +TG+ G
Sbjct: 84 TLRVDKGVTILGSQKISDYPL---MPTRVAGIEMTWPA----ALVNIYEQKNAEITGE-G 135
Query: 155 TIDGQGSVWWDWFSSQSLNY-------------SRPHLVEFISSENVVVSNLTFLNAPAY 201
TIDG G V+WD + S +Y RP L++ +S V +S L + +
Sbjct: 136 TIDGDGKVFWDGYWSLRKDYDTRGIRWAADYDSKRPRLIQVFNSSQVKLSGLMLRRSGFW 195
Query: 202 NIHPVYCSNVHIQNISVHAPP--ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWD 259
+H Y +V + +++ P T GI DSS V ++ IA+ DA+ LK+G D
Sbjct: 196 TVHICYSHDVTLDGLTIRNNEGGRGPSTDGIDIDSSKKVLVQHADIAVNDDALCLKAGRD 255
Query: 260 EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN-GIEFRT 318
G+ RPT D+ +R +++ + + V GSE SGG N++ + + + GI F++
Sbjct: 256 SDGLRVNRPTEDIVLRDSVIRDGA-AGVTIGSETSGGFRNIEAYGLTVLKQVPVGILFKS 314
Query: 319 TKGRGGYIRQIVISDAELYNINVAFGACGNCG-----SH-PD--DDFDP------DALPA 364
+ RGG+ + D + ++ V N +H P+ D+ P +PA
Sbjct: 315 ARTRGGWGENLRFHDITMTDVPVVLRVNMNWNPSYSYAHIPETIKDYPPYWTVLSTEVPA 374
Query: 365 IDQIT-FKDIIGTNITIAGNFTGIQEAPFANICLSNISLS-INPGSYNSWECSNIH 418
I F+D+ NI G T + + + + L L + + + SN H
Sbjct: 375 EKGIARFRDVHIWNIKATGAKTAFEVSAYPQVPLDRFVLDHLQIAAQTAGHISNAH 430
>gi|452973315|gb|EME73137.1| glycoside hydrolase [Bacillus sonorensis L12]
Length = 436
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 155/321 (48%), Gaps = 46/321 (14%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
+T FGA GKT +T AFQ AI KGG ++ VP G +LTG+ L S++ L + K
Sbjct: 26 VTRFGADSGGKTDSTAAFQQAI---DEAHQKGGGRVTVPKGVFLTGALRLKSNVELHVTK 82
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG-- 160
AVI SQNP+ D + + + G+EL Y LI Y ++ +TG G +DGQ
Sbjct: 83 DAVIRFSQNPA--DYLPAVLTRFEGVEL--YNYSPLIYAYEAENIAITG-GGMLDGQADD 137
Query: 161 SVWWDW-----------------FSSQSLN------------YSRPHLVEFISSENVVVS 191
WW W F N Y RP+ ++ +NV +
Sbjct: 138 RHWWPWKRGTNGQPSQEKDRDALFEMAERNVPVEERRFGTGHYLRPNFIQPYRCKNVFIQ 197
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
+T +N+P + IHPV C NV + + V P T G+ P+S ++ I++C+ G D
Sbjct: 198 GVTVMNSPMWQIHPVLCENVTVDGVKVIG--HGPNTDGVDPESCKSMIIKNCLFDNGDDC 255
Query: 252 ISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL 311
I++KSG + G P+ ++ I ++ G V GSE+SGG+ NV E +L DS
Sbjct: 256 IAIKSGRNADGRRINVPSENIVIENNEMKDGHG-GVTIGSEISGGVKNVFAEG-NLMDSP 313
Query: 312 N---GIEFRTTKGRGGYIRQI 329
N + +T RGG ++ I
Sbjct: 314 NLDRALRIKTNSVRGGVLKNI 334
>gi|354723575|ref|ZP_09037790.1| glycoside hydrolase family protein [Enterobacter mori LMG 25706]
Length = 430
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 186/405 (45%), Gaps = 57/405 (14%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+SI FGA + ++T A Q AI K G + +P+G++LTG+ L S +TL L
Sbjct: 4 ISILTFGADPSAERISTTAIQQAIAKAKP-----GDSVVIPAGRYLTGAIFLKSDITLHL 58
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+G+V+LGSQ+ + ++D + GI++ R +IN ++V +TG GT+DGQG
Sbjct: 59 VQGSVLLGSQHLEDYPLIDTRVA---GIDM--RWPAGIINVINAQNVSLTG-TGTLDGQG 112
Query: 161 SVWWDWF-------------SSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAY 201
+WW F S+ L + RP V S+N+++ + T + +
Sbjct: 113 RIWWQRFWGDDEHGGMVGDYSANGLRWVVDYDCQRPRNVLVYESKNILLKDFTSCESGFW 172
Query: 202 NIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEY 261
N+H Y +V ++N+S+ P T GI DS + V IE C ++ D I +K+G
Sbjct: 173 NVHLCYSRDVAVENLSI-INSAGPSTDGIDIDSCEQVRIERCTVSCNDDNICIKAGRGRE 231
Query: 262 GIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKG 321
R + IR +L + GS + GSE SGGI +V +E + G ++ +
Sbjct: 232 AAPKARTARAIVIRECVL--NKGSGITLGSETSGGIEHVLIENNRFNGTGVGFRIKSARN 289
Query: 322 RGGYIRQIVISDAELYNINV------------AFGACGNCGSHPD------DDFDPDA-- 361
RGG+IR I + + L N+ ++G GN P+ D + +A
Sbjct: 290 RGGFIRHITVRNLLLQNVRFPVLIQLNWFPQYSYGDSGNLQDKPEHWRKLADGVEGEAGL 349
Query: 362 ----LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 402
P + IT + + A G + P + L NIS+
Sbjct: 350 TEVSHPTLSNITARRSDSNLFSRAFFIEGYPDRPVCGLTLDNISV 394
>gi|300770984|ref|ZP_07080861.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762257|gb|EFK59076.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 473
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 165/346 (47%), Gaps = 55/346 (15%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
+PT + ++ I +FGA GDG T NT AF+ AI + +GG ++ VP+G +LTG+
Sbjct: 48 RPTFKNKDYN--IADFGAKGDGVTKNTEAFRLAI---EKCHAEGGGRVVVPNGVFLTGAI 102
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
L S++ L L G IL S++ S + +V + R + Y S I Y ++ +T
Sbjct: 103 YLKSNVNLHLTDGTTILFSRDSSDYPIV-----FTRWEGMECMNYSSFIYAYGEENIAIT 157
Query: 151 GDNGTIDGQ--GSVWWDWFSSQSL-----------------------------------N 173
G GT+DG WW W ++
Sbjct: 158 G-KGTLDGNSDNDNWWWWCGARKYGWNESRSGEQKPARARLHTMMHQEVDAKQRVFGDGQ 216
Query: 174 YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPD 233
Y RP+ V+ + +N+++ ++ +N+P +N++PV C NV I+ + V + P G P+
Sbjct: 217 YLRPNFVQPYNCKNILIEDIRMINSPMWNLNPVLCENVTIERVKVIS--HGPNNDGCDPE 274
Query: 234 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 293
+ NV I+DC G D I++KSG DE G GRP + I +++ G V GSE+
Sbjct: 275 ACKNVLIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCIMKDGHG-GVVIGSEI 333
Query: 294 SGGISNVQVEKIHLYDSLNG---IEFRTTKGRGGYIRQIVISDAEL 336
+GG N+ + DS N + +T+ RGG I + + D E+
Sbjct: 334 AGGARNIYALNNKM-DSPNLDRILRLKTSSSRGGIIENVFMKDVEV 378
>gi|326790331|ref|YP_004308152.1| polygalacturonase [Clostridium lentocellum DSM 5427]
gi|326541095|gb|ADZ82954.1| Polygalacturonase [Clostridium lentocellum DSM 5427]
Length = 515
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 188/390 (48%), Gaps = 45/390 (11%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+++ +FGAVGDG T++T A Q AI G+++ +P+G + L SH+TL L
Sbjct: 80 LNVKDFGAVGDGVTMDTAAIQAAIMAAPK-----GSRVVIPAGTYKILPLFLKSHMTLEL 134
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRR-------------YKSLINGYMLRDV 147
+GA +L + + + LP G+ I G Y S+I G +RDV
Sbjct: 135 LEGATLLAHTDRKDYPI---LP--GKMILEDGSIAYLASWEGDMADCYASIITGIGVRDV 189
Query: 148 VVTGDNGTIDGQGSVWWDWFSSQSLNYS--RPHLVEFISSENVVVSNLTFLNAPAYNIHP 205
+ G GTIDG G DW+ + RP + + E+VVV +T N+P++ +HP
Sbjct: 190 RIIG-QGTIDGNGQNA-DWWVDCKVKRGAWRPRSLYLVDCEDVVVEGITIKNSPSWTVHP 247
Query: 206 VYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAY 265
V + + N++++ P +SP T GI P+S + V I ++G D I++KSG +
Sbjct: 248 VRSTKLRFINLTLNNPKDSPNTDGIDPESCNGVEIIGVKFSLGDDCIAIKSGKISVPVDM 307
Query: 266 GRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG-- 323
RP+ ++ IR L++ G V GSEMSGGI +V VE+ ++ G+ +T +GRG
Sbjct: 308 RRPSENIIIRNCLMEYGHG-GVVLGSEMSGGIKHVYVERCFFRNTDRGLRIKTRRGRGNT 366
Query: 324 GYIRQIVISDAELYNINVAFGACGNCGSHPDDD------FDPDALPA------IDQITFK 371
I +I I + ++ + F NC D D + D LP I + F+
Sbjct: 367 AVIDEIYIKNIKMDGVLTPFTL--NCFYFCDPDGKTEYVWSKDKLPVDERTPYIGTLNFE 424
Query: 372 DIIGTNITIAGNFT-GIQEAPFANICLSNI 400
+I N + F G+ E + N+
Sbjct: 425 NIYCENSEVCAGFIYGLPEQTIKELNFKNV 454
>gi|373469919|ref|ZP_09561077.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371763536|gb|EHO52007.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 526
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 191/389 (49%), Gaps = 32/389 (8%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+++ +FGA GDG +++ Q AI + K G +Y+P GK+L L S++ L++
Sbjct: 83 LNVKDFGAAGDGVKTDSVCIQAAI----NACPKDGT-VYIPKGKYLCTPVFLKSNIDLWI 137
Query: 101 EKGAVILGSQNPSHWDVV-------DPLPSYGRGIEL--PGRRYKSLINGYMLRDVVVTG 151
+K A+++G ++ + ++ D Y G P + +LI G + +V++ G
Sbjct: 138 DKDAILIGEKDRKKYPILPGMTQSSDENDEYNIGSWEGNPLDCFAALITGISVENVLIFG 197
Query: 152 DNGTIDGQGSV--WWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
+ G +DG + WW +++ + RP+ V + +N+ + L +N+P++ +HP Y
Sbjct: 198 E-GILDGNAGMLDWWKDAKKKNIAW-RPNTVFLYNCKNIAMQGLCIMNSPSWTLHPYYSD 255
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
N+ N ++ P SP T G+ P+S +NV I I++G D +++KSG + + +P
Sbjct: 256 NLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPA 315
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIR 327
++ IR + + G SV GSE++ G+ +V+V K + G+ +T +GRG +
Sbjct: 316 KNIVIRNSIFRKGHG-SVTIGSEVAAGVYDVRVGKCIFEGTDRGLRIKTRRGRGEKSVLD 374
Query: 328 QIVISDAELYNINVAFGACGNCGSHPDDDFD----------PDALPAIDQITFKDIIGTN 377
I + + ++ + F A PD D + P I +I +DI N
Sbjct: 375 NICFENILMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRCEN 434
Query: 378 IT-IAGNFTGIQEAPFANICLSNISLSIN 405
+ I G+ E P I L NI+L+ +
Sbjct: 435 VKNIFACLYGLPEMPVEEIVLENITLNFD 463
>gi|59044767|gb|AAW84066.1| pectate lyase [uncultured bacterium]
Length = 471
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 182/404 (45%), Gaps = 62/404 (15%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ +TEFGA GDG+T TLAF+ AI + GG ++ VP G +LTG+ +L S++ L
Sbjct: 53 RTFDLTEFGAKGDGRTDCTLAFRRAI---DRCTNAGGGRVVVPPGSYLTGAIHLKSNVDL 109
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ +G + SQNP D + + S G+E+ Y I + ++ +TG GT++G
Sbjct: 110 HISEGTTVKFSQNPK--DYLPVVFSRWEGVEV--FNYSPFIYAFEQTNIAITG-KGTLNG 164
Query: 159 Q--GSVWWDW-----------FSSQSLN-----------------------YSRPHLVEF 182
Q WW W S+Q + Y RP ++
Sbjct: 165 QSDNEHWWPWNGRAAYGWKEGMSNQRPDRNALFAMAEKGVPVQERIFGEGHYLRPQFIQP 224
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
ENV++ +T N+P + IHPV C NV +QN+ +++ P G P+S +V I+D
Sbjct: 225 YRCENVLIEGVTIRNSPMWEIHPVLCRNVIVQNVIINS--HGPNNDGCNPESCTDVLIKD 282
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQV 302
C G D I++KSG + G PT ++ + ++ G + GSE+SGG+ N+
Sbjct: 283 CDFDTGDDCIAIKSGRNADGRRLKAPTENIIVTGCRMKDGHG-GITVGSEISGGVRNLFA 341
Query: 303 EKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP 359
L DS N + + RGG + L+ N+ G + D +++
Sbjct: 342 SNCRL-DSPNLDHALRVKNNAMRGGLLEN-------LHFRNIDVGQVAHAVITIDFNYEE 393
Query: 360 DA----LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
A P + T + T A + G+ AP N+ L+N
Sbjct: 394 GAKGSFTPVVRDYTVDGLRSTKSKYALDVQGLATAPIVNLRLTN 437
>gi|227537592|ref|ZP_03967641.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242594|gb|EEI92609.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 473
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 164/346 (47%), Gaps = 55/346 (15%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
+PT + ++ I +FGA GDG T NT AF+ AI + +GG ++ VP G +LTG+
Sbjct: 48 RPTFKNKDYN--IADFGAKGDGVTKNTEAFRLAI---EKCHAEGGGRVVVPHGVFLTGAI 102
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
L S++ L L G IL S++ S + +V + R + Y S I Y ++ +T
Sbjct: 103 YLKSNVNLHLTDGTTILFSRDSSDYPIV-----FTRWEGMECMNYSSFIYAYGEENIAIT 157
Query: 151 GDNGTIDGQ--GSVWWDWFSSQSL-----------------------------------N 173
G GT+DG WW W ++
Sbjct: 158 G-KGTLDGNSDNDNWWWWCGARKYGWNESRSGEQKPARARLHTMMHQEVDAKQRVFGDGQ 216
Query: 174 YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPD 233
Y RP+ V+ + +N+++ ++ +N+P +N++PV C NV I+ + V + P G P+
Sbjct: 217 YLRPNFVQPYNCKNILIEDIKMINSPMWNLNPVLCENVTIERVKVIS--HGPNNDGCDPE 274
Query: 234 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 293
+ NV I+DC G D I++KSG DE G GRP + I +++ G V GSE+
Sbjct: 275 ACKNVLIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCIMKDGHG-GVVIGSEI 333
Query: 294 SGGISNVQVEKIHLYDSLNG---IEFRTTKGRGGYIRQIVISDAEL 336
+GG N+ + DS N + +T+ RGG I + + D E+
Sbjct: 334 AGGARNIYALNNKM-DSPNLDRILRLKTSSSRGGIIENVFMKDVEV 378
>gi|315607918|ref|ZP_07882911.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
gi|315250387|gb|EFU30383.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
Length = 470
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 160/349 (45%), Gaps = 56/349 (16%)
Query: 32 PTLDPRP-HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
PTL P + VS+ +FG GDG T+NT AF A + + KGG L VP+G +LTG
Sbjct: 39 PTLPTIPDNRVSLPDFGGKGDGVTMNTEAFGKA---MSELSKKGGGHLDVPAGVYLTGMI 95
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
+ ++ L L+K A+I+ S P D + PG IN +++ +T
Sbjct: 96 SFKDNIDLHLDKNAIIVLS--PDKNDFIKIENGMKDDKATPG------INASKRKNISIT 147
Query: 151 GDNGTIDGQGSVWW-----------DW------------------------FSSQSLNYS 175
G+ G IDG G WW +W FS+ + Y
Sbjct: 148 GE-GIIDGNGE-WWRPVKRGKVSDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYE 205
Query: 176 -----RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGI 230
RPHLV F ENV+V +T LN+P ++I P C+NV I I+V P + I
Sbjct: 206 TQERYRPHLVRFTDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAI 265
Query: 231 VPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFG 290
S V I + +I G D I +K+G G+ YG P +V I + ++ G V G
Sbjct: 266 DISSCRQVLIINNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNAHGGFV-IG 323
Query: 291 SEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI 339
SE SGG+ N+ V + + G+ F++ RGG I ISD + +I
Sbjct: 324 SEFSGGMKNIVVRRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDI 372
>gi|402308351|ref|ZP_10827360.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400375795|gb|EJP28690.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 470
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 160/349 (45%), Gaps = 56/349 (16%)
Query: 32 PTLDPRP-HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
PTL P + VS+ +FG GDG T+NT AF A + + KGG L VP+G +LTG
Sbjct: 39 PTLPTIPDNRVSLPDFGGKGDGVTMNTEAFGKA---MSELSKKGGGHLDVPAGVYLTGMI 95
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
+ ++ L L+K A+I+ S P D + PG IN +++ +T
Sbjct: 96 SFKDNIDLHLDKNAIIVLS--PDKNDFIKIENGMKDDKATPG------INASKRKNISIT 147
Query: 151 GDNGTIDGQGSVWW-----------DW------------------------FSSQSLNYS 175
G+ G IDG G WW +W FS+ + Y
Sbjct: 148 GE-GIIDGNGE-WWRPVKRGKVSDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYE 205
Query: 176 -----RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGI 230
RPHLV F ENV+V +T LN+P ++I P C+NV I I+V P + I
Sbjct: 206 TQERYRPHLVRFTDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAI 265
Query: 231 VPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFG 290
S V I + +I G D I +K+G G+ YG P +V I + ++ G V G
Sbjct: 266 DISSCRQVLIVNNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNAHGGFV-IG 323
Query: 291 SEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI 339
SE SGG+ N+ V + + G+ F++ RGG I ISD + +I
Sbjct: 324 SEFSGGMKNIVVRRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDI 372
>gi|371940174|dbj|BAL45524.1| glycoside hydrolase [Bacillus licheniformis]
Length = 436
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 155/325 (47%), Gaps = 46/325 (14%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
S +T FGA G GK T A Q AI GG ++ VP G +L+G+ L S++ L
Sbjct: 22 RSFDVTAFGADGSGKKDATGAIQKAI---DQAHKAGGGRVAVPEGVFLSGALRLKSNVEL 78
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
L +GAVI SQNP D + + + G+EL Y LI Y ++ +TG GT+DG
Sbjct: 79 HLAQGAVIKFSQNPE--DYLPVVLTRFEGVEL--YNYSPLIYAYEAENIAITG-KGTLDG 133
Query: 159 QG--SVWWDWF------SSQSLN-----------------------YSRPHLVEFISSEN 187
QG WW W SSQ + Y RP+ ++ ++
Sbjct: 134 QGDDEHWWPWKRGTNGQSSQEKDRNALFEMAERGVPVTERQFGKGHYLRPNFIQPYRCKD 193
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAM 247
+++ +T LN+P + +HPV C NV + I V P T G+ P+S NV I+ C
Sbjct: 194 ILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKGCHFDN 251
Query: 248 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 307
G D I++KSG + G P+ ++ I ++ G V GSE+SGG+ NV E +L
Sbjct: 252 GDDCIAVKSGRNADGRRINMPSENIVIEHNEMKDGHG-GVTIGSEISGGVKNVIAEG-NL 309
Query: 308 YDSLN---GIEFRTTKGRGGYIRQI 329
DS N + +T RGG + I
Sbjct: 310 MDSPNLDRALRIKTNSVRGGVLENI 334
>gi|418299606|ref|ZP_12911438.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
gi|355534759|gb|EHH04058.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
Length = 517
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 168/374 (44%), Gaps = 32/374 (8%)
Query: 51 DGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQ 110
+G N A + A+ + G L + +G W L S++ L +GAV+
Sbjct: 101 EGARANAQALERAVAAVPQ-----GGTLRLAAGVWTASPVRLKSNMAFHLAQGAVLRAPS 155
Query: 111 NPSHWDVVDPLPSYGRGIE----LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WW 164
W ++ GR + LP + + ++ + ++V+ G G +DG G WW
Sbjct: 156 TRRGWPILPARDEAGRMLGSWEGLPDACFTAPVHAIGVDNLVIEG-RGILDGSGDKGDWW 214
Query: 165 DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES 224
W RP + +S + T NA ++ IHP C ++ +S+ AP +S
Sbjct: 215 RWPKETRDGARRPRGLHLVSCRKTNLLGFTIRNAASWTIHPQGCEDLIAAGLSIAAPHDS 274
Query: 225 PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGW-----DEYGIAYGRPTTDVHIRRVLL 279
P T G P+S NV I ++G D I++K+G ++ +A T V + L+
Sbjct: 275 PNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAE---TRGVRVGHCLM 331
Query: 280 QSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI 339
+ G V GSEMSGG+ +V VE + + G+ +T +GRGG + I + L +
Sbjct: 332 ERGHGGLV-IGSEMSGGVHDVAVEDCDMIGTDRGLRLKTRRGRGGAVSNIAMRRVLLDGV 390
Query: 340 NVAFGACG--NCGSHPDDDFDPDALPA--------IDQITFKDIIGTNIT-IAGNFTGIQ 388
A A +C + DD+ PA ID IT +D+ N++ AG F G+
Sbjct: 391 KTALSANAHYHCDADGHDDWVQSRNPAPVDSGTPFIDGITVEDVEIRNLSHAAGAFLGLA 450
Query: 389 EAPFANICLSNISL 402
EAP N+ + N+++
Sbjct: 451 EAPIRNVTIRNVTI 464
>gi|288924892|ref|ZP_06418828.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288338082|gb|EFC76432.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 470
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 160/349 (45%), Gaps = 56/349 (16%)
Query: 32 PTLDPRP-HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
PTL P + VS+ +FG GDG T+NT AF A + + KGG L VP+G +LTG
Sbjct: 39 PTLPTIPDNRVSLPDFGGKGDGVTMNTEAFGKA---MSELSKKGGGHLDVPAGVYLTGMI 95
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
+ ++ L L+K A+I+ S P D + PG IN +++ +T
Sbjct: 96 SFKDNIDLHLDKNAIIVLS--PDKNDFIKIENGMKDDKATPG------INASKRKNISIT 147
Query: 151 GDNGTIDGQGSVWW-----------DW------------------------FSSQSLNYS 175
G+ G IDG G WW +W FS+ + Y
Sbjct: 148 GE-GIIDGNGE-WWRPVKRGKVSDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYE 205
Query: 176 -----RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGI 230
RPHLV F ENV+V +T LN+P ++I P C+NV I I+V P + I
Sbjct: 206 TQERYRPHLVRFTDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAI 265
Query: 231 VPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFG 290
S V I + +I G D I +K+G G+ YG P +V I + ++ G V G
Sbjct: 266 DISSCRQVLIVNNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNAHGGFV-IG 323
Query: 291 SEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI 339
SE SGG+ N+ V + + G+ F++ RGG I ISD + +I
Sbjct: 324 SEFSGGMKNIVVRRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDI 372
>gi|322437527|ref|YP_004219617.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165420|gb|ADW71123.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 467
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 162/339 (47%), Gaps = 19/339 (5%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+++ +FGA+GDG TL T + Q I GG ++ +P+G++LTGS +L + +TL
Sbjct: 49 QLNVRDFGAIGDGITLETESLQRTIDRCGVL---GGGEVIIPAGRYLTGSVSLRTKVTLR 105
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
L VILGS + +H+ V G +PG Y LI+ R + V G G+I+G
Sbjct: 106 LAAECVILGSPDLAHYAVSQ---VRWEGKWIPG--YLGLIHALDARKIAVLGP-GSIEGN 159
Query: 160 GSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVH 219
+V L RP L+EF+ ++V + + A ++IHP C N+ +N++V
Sbjct: 160 VAVAGRPTKENPLR--RPALIEFLYCDDVHLEGFSTSYAHMWSIHPTCCDNLVFRNLTVR 217
Query: 220 APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLL 279
+ + GI DS +V I+ C IA G D ISLKSG E RPT DV I L
Sbjct: 218 STLTNGD--GIDIDSCRHVLIDTCDIASGDDCISLKSGRGEEAYQLARPTEDVRIVNCTL 275
Query: 280 QSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIRQIVISDAELYN 338
+ + + GSE S GI V +E + + ++ GRG +I + + D
Sbjct: 276 EGRGFACIGIGSETSAGIRRVLIEGCRVTSVYKFAVYIKSRVGRGAFIEDLTVRDMSAAK 335
Query: 339 INVAFGACGNCGSHPDDDFDP----DALPAIDQITFKDI 373
+ + F + D+ +P D LP I+F I
Sbjct: 336 MRMGFLKISQTSAGVQDE-NPVPGLDGLPLFRNISFLRI 373
>gi|399024363|ref|ZP_10726403.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398080600|gb|EJL71406.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 467
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 178/386 (46%), Gaps = 65/386 (16%)
Query: 3 MPVALLLLLALCSAILINGEVSDGQCDDQP-----TLDP-------RPHSVSITEFGAVG 50
M L+L AL +I ++G+ +QP TL R +T+FGA+G
Sbjct: 1 MKKYALILFALIISISVSGQYKPWTSSEQPLQEINTLKKQIVKPNFRKKDYLVTDFGAIG 60
Query: 51 DGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQ 110
DGKT NT AF+ AI + +GG ++ VP G +LTG+ L S++ L + +GA IL SQ
Sbjct: 61 DGKTKNTGAFKKAI---EKCNVEGGGRVVVPKGIFLTGAIYLKSNVDLHISEGATILFSQ 117
Query: 111 NPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ--GSVWWDWFS 168
+ + + +V + R + Y SLI + ++ +TG GT+DG WW W
Sbjct: 118 DSNDYPIV-----FTRWEGMECMNYSSLIYAHEEENIAITG-KGTLDGNSDNDHWWFWCG 171
Query: 169 SQSLN-----------------------------------YSRPHLVEFISSENVVVSNL 193
++ Y RP+ V+ S+N ++++
Sbjct: 172 AKKYGWNESRPGRQNPARAKLHEYMAQKKDPRERIFGDGYYLRPNFVQPYKSKNFYMADV 231
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
N+P +N++PV C NV I+ + V + P G P++ NV I+D G D I+
Sbjct: 232 LVKNSPMWNLNPVLCENVLIERVKVIS--HGPNNDGFDPEACKNVWIKDSYFDTGDDCIA 289
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN- 312
+KSG DE G G+P + I ++ G V GSE++GG N+ ++ DS N
Sbjct: 290 IKSGRDEDGRGIGKPAENHIIENCEMKDGHG-GVVIGSEIAGGAKNIYAIG-NVMDSKNL 347
Query: 313 --GIEFRTTKGRGGYIRQIVISDAEL 336
+ +T+ RGG I + + ++
Sbjct: 348 ERALRIKTSSNRGGIIENVFFYNTKV 373
>gi|280977865|gb|ACZ98650.1| polygalacturonase [Cellulosilyticum ruminicola]
Length = 518
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 189/389 (48%), Gaps = 35/389 (8%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
++I +FGA GDG++++ A Q AI GA++ P+G + T L SH+T+ L
Sbjct: 81 LNIRDFGAKGDGESMDAAAIQAAIAAAPK-----GARIVFPAGTYRTTPIFLKSHITIEL 135
Query: 101 EKGAVILGSQNPSHWDVV--------DPLPSYGRGI---ELPGRRYKSLINGYMLRDVVV 149
+GA +LG + ++ D Y G E+ Y SL+ G + DV +
Sbjct: 136 MEGATLLGHHERDAYPILPGKLTKEDDNENFYFLGTWEGEI-AECYASLLTGIGVEDVRI 194
Query: 150 TGDNGTIDGQGSVWWDWFSSQSLNYS--RPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
G+ GT+DG G DW+ + + RP + + +++V +T N+P++ +HP+
Sbjct: 195 IGE-GTLDGNGQNG-DWWINCKVKREAWRPRSLYLLECHDILVEGITIKNSPSWTVHPIR 252
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
S + N++++ P +SP T GI P+S + V I ++G D I++KSG + R
Sbjct: 253 SSKLRFINLTLNNPKDSPNTDGIDPESCNGVEILGVKFSLGDDCIAIKSGKISIPLKERR 312
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GY 325
P+ ++ IR L+Q G +V GSEMSGG+ NV VE+ D+ G+ +T +GRG
Sbjct: 313 PSENIIIRNCLMQYGHG-AVVLGSEMSGGVKNVFVERCFFEDTDRGLRIKTRRGRGNTAI 371
Query: 326 IRQIVISDAELYNINVAFGACGNCGSHPDDDFD----------PDALPAIDQITFKDIIG 375
I QI + + ++ + F PD + + P I + F+++
Sbjct: 372 IDQIYVKNIQMKGVLTPFTLNAFYFCDPDGKTEYVRTKEKLAVDERTPLIGSLEFENMEC 431
Query: 376 TNITIAGNFT-GIQEAPFANICLSNISLS 403
+ I F G+ E ++ NIS++
Sbjct: 432 KDAEICAGFIYGLPEQKVKSLTFKNISIN 460
>gi|320107891|ref|YP_004183481.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319926412|gb|ADV83487.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 408
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 170/370 (45%), Gaps = 30/370 (8%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+ ++ +GA GDG T +T+A Q AI + A KGG + S K++T L S +
Sbjct: 25 TCNVRAYGARGDGATKDTVAIQKAI---DACAGKGGTVVIGGSSKFITAPLTLKSKMIFR 81
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
+E G + S + + + + +GR ++++ D+ +TG G IDG+
Sbjct: 82 VEAGTTLEASTDHNDFPEKEEFKDHGR---------QAMLTAKAAEDITITG-GGVIDGR 131
Query: 160 GSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVH 219
G WW N RP L+ F +++ + N+T N+ + I P Y ++ +N+ V
Sbjct: 132 GESWW-----PQPNLPRPRLIVFDHCKHIRMENITAQNSAMWQIVPYYSDDLVFRNMKVL 186
Query: 220 APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLL 279
AP S T GI P +S + I+ I G D +++KSG G P D+ R + +
Sbjct: 187 APQTSHNTDGIDPFASTKIVIDHVYIDTGDDNVAIKSGQP------GSPGPDLPSRDITI 240
Query: 280 QSSS---GSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
G ++ GSE++GG+ NV+ E+IH + GI ++ + RG I V D +
Sbjct: 241 TDCEFLHGHGLSIGSEIAGGVQNVRAERIHFKGTDQGIRVKSNRDRGNDIGNFVFRDITM 300
Query: 337 YNINVAFGACGNCGSHPD---DDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
N+ A PD ++ P IT +++ A G+ E+P
Sbjct: 301 ENVKTAILLSEFYPKIPDTITEEPVTRLTPHFHDITIENVQAVGSRDAAVIVGLPESPIR 360
Query: 394 NICLSNISLS 403
N+ L+N+ +S
Sbjct: 361 NLKLTNVHIS 370
>gi|373954236|ref|ZP_09614196.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373890836|gb|EHQ26733.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 545
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 204/465 (43%), Gaps = 77/465 (16%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
+ + +I ++GAV DG TLNT + NAI + + GG + +P G W+TG L S++
Sbjct: 40 KKDTFNIIKYGAVADGITLNTKSINNAI---DACSKNGGGVVLIPQGLWMTGPIVLKSNV 96
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
L +++ A++ + + S + +V+ G R +S ++G L ++ +TG G I
Sbjct: 97 NLHIDRAAMVQMTDDKSQYPLVE-----GNYEGHAAVRNQSPVSGTNLVNIAITG-GGII 150
Query: 157 DGQGSVWW----------------------------DWFSSQSL---------------- 172
DG G+ W W+ SQS
Sbjct: 151 DGNGTGVWRAIGKDRLTESEWKELVASGGVVSENGKSWYPSQSYAKGNAIKDVSLLKPGK 210
Query: 173 ---------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPE 223
+Y RP++V + +++S TF N+P + +H + C ++ +Q++ V P
Sbjct: 211 SLSDYEEYKDYFRPNMVVLTGCKKILLSGTTFQNSPNWCLHTLLCEDLTLQDVHVRNPWN 270
Query: 224 SPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSS 283
+ I +S NV +E+ G D + +KSG DE G G PT +V +R ++ +
Sbjct: 271 AQNGDAIDVESCRNVLVENSTFDAGDDGLCIKSGRDEEGRKRGVPTENVVMRNNIVYRAH 330
Query: 284 GSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-NVA 342
G V GSEMSGG N+ V + G+ F+T +GRGG + I I + + +I + A
Sbjct: 331 GGFV-IGSEMSGGARNIFVSDCTFIGTDIGLRFKTARGRGGIVENIYIKNISMRDILHEA 389
Query: 343 FGACGNCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITIAGNFTGI-----QEAPFANI 395
S P + + T F++ +N+ G TGI E NI
Sbjct: 390 ILFDMYYMSKAGSTLGLKTFPPVTEATPQFRNFYVSNVACNGAETGIFVRGLPEMSIKNI 449
Query: 396 CLSNISLSINPGS----YNSWECSNIHGSSESVFPEPCPELENSS 436
L N+ L + G+ N+ NI + ES +P +ENS+
Sbjct: 450 YLENMVLKADKGAELIEANNISLKNI--TLESKNTKPLINIENST 492
>gi|90020600|ref|YP_526427.1| glycoside hydrolase family protein [Saccharophagus degradans 2-40]
gi|89950200|gb|ABD80215.1| polygalacturonase-like protein [Saccharophagus degradans 2-40]
Length = 463
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 188/418 (44%), Gaps = 57/418 (13%)
Query: 30 DQPTLDPRPHS-VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTG 88
D T+ P+ ++ EFG G + NTLAF+ AI + + GG ++ VP+G++ TG
Sbjct: 41 DNTTIPTFPNKEFNLLEFG--GKEGSDNTLAFKKAI---AACSKAGGGKVVVPAGRFETG 95
Query: 89 SFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVV 148
+ +L S++ L + +GA I +P ++ + + + G+E G Y LI Y ++
Sbjct: 96 AIHLESNVNLHISEGATIAFFTDPKYY--LPAVFTRWEGMECMG--YSPLIYAYGKTNIA 151
Query: 149 VTGDNGTIDGQG--SVWWDW----------FSSQSL-----------------------N 173
+TG GT+DGQ + WW W + SQ +
Sbjct: 152 ITG-KGTLDGQADPTHWWAWKGNKEWGVEGYPSQKESRNQLFAQAEAGDPVRERVYADGH 210
Query: 174 YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPD 233
Y RP V+ ENV++ ++T +NAP + +HP NV ++ VH P + G P+
Sbjct: 211 YLRPSFVQPYKCENVLIEDITIINAPFWLLHPTLSQNVTVR--GVHLESLGPNSDGCDPE 268
Query: 234 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 293
S NV IE+C G D I++KSG + G PT +V IR +++ G V GSE+
Sbjct: 269 SCKNVVIENCFFNTGDDCIAIKSGRNNDGRRLATPTENVIIRNCKMEAGHG-GVVIGSEI 327
Query: 294 SGGISNVQVEK--IHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGS 351
SGG+ NV E + D GI +T RGG + I + + + + A
Sbjct: 328 SGGVRNVFAENNVMSSPDLEKGIRIKTNSVRGGLLENIYVRNCTIGEVQQAIVINFQYEE 387
Query: 352 HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFAN--ICLSNISLSINPG 407
FD P + + ++++ + N G + AP N I S NPG
Sbjct: 388 GDAGKFD----PTVRNVEIRNLVCQHALQVFNIRGFERAPIQNFRIIDSTFVRGDNPG 441
>gi|374983540|ref|YP_004959035.1| glycoside hydrolase family protein [Streptomyces bingchenggensis
BCW-1]
gi|297154192|gb|ADI03904.1| glycoside hydrolase family 28 [Streptomyces bingchenggensis BCW-1]
Length = 475
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 168/346 (48%), Gaps = 48/346 (13%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
+P PR + +IT++GAVGDG+T+NT AF+ AI GG + VP G++LTG+
Sbjct: 53 RPPAFPR-RTFTITDYGAVGDGQTMNTEAFRAAI---ADCHRAGGGHVLVPEGRFLTGAI 108
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
+L S + L + +GA I S +P D + + + G E Y I Y R+V VT
Sbjct: 109 HLRSGVDLHVTEGATIAFSPDPR--DFLPVVFTRWEGTEC--YNYSPFIYAYGERNVAVT 164
Query: 151 GDNGTIDGQGSV--WWDWFSS-------QSL-------------------NYSRPHLVEF 182
G GT+DGQ + W W+ + QSL +Y RP +V+F
Sbjct: 165 GP-GTLDGQARLGPWESWYRTSGPQGPDQSLLRRMGSAGVPVAERVFGDGHYLRPKMVQF 223
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
NV+VS LT ++ P + +HPV +NV +++I+V + + T G P+ +V I
Sbjct: 224 YRCRNVLVSGLTIVDPPMWTVHPVLSTNVTVRDITVDSTLYN--TDGCDPECCSDVLITG 281
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQV 302
C D +++KSG DE G G P+ ++ +R G + GSEMSGG+ ++
Sbjct: 282 CRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCRFSGRWG-GMTVGSEMSGGVRDIFA 340
Query: 303 EKIHL--------YDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN 340
E + Y + + + +K RGG I + I + N+
Sbjct: 341 ENCEINSPDFPGRYPVKHALYVKASKKRGGCIDGVHIRNFTGQNVE 386
>gi|366053529|ref|ZP_09451251.1| polygalacturonase [Lactobacillus suebicus KCTC 3549]
Length = 439
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 176/383 (45%), Gaps = 53/383 (13%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
+ D GG +L + G+ LTG NL S+LT+ E AVI NP ++ P+ +
Sbjct: 23 INKIGDSGG-ELIIAQGEHLTGPINLVSNLTVTFETDAVIKFKNNP---ELYTPVWTRWE 78
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSS----------------- 169
GIE NG ++V+ G G +DG GS WWD F +
Sbjct: 79 GIECYAMHPLMYANGK--ENIVIRG-KGVVDGSGSSWWDKFRNIEQEDRTLPREKYELDL 135
Query: 170 ----------------QSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHI 213
S + RP L++F ++ +S+ T N+P + +H VY + + I
Sbjct: 136 AKLNPDYKTRTGGGGRPSTQFLRPPLIQFWKCHDIKLSDFTLENSPFWTLHMVYSNKISI 195
Query: 214 QNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVH 273
N++ P E+ T + DSS++V +++C++ +G D ++LKSG E GI +PT +V
Sbjct: 196 DNMTFSNPAEAINTDAMDIDSSEDVTVKNCLLDVGDDGVTLKSGSGEDGIRVNKPTKNVK 255
Query: 274 IRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVIS- 332
+ + +S G +A GSE + GIS+V+V + GI ++ + RGG I I +S
Sbjct: 256 VSDCRILASHG-GIAIGSETAAGISDVEVSNCTFDGTRRGIRLKSRRTRGGTIENINLSG 314
Query: 333 -DAELYNINVAFGACGNCGSHPDD-----DFDP----DALPAIDQITFKDIIGTNITIAG 382
+L ++ G P++ D P + P I I+ K+I TN+
Sbjct: 315 LKMDLCWCPISLEQYFAPGVLPEEEATVLDEGPQPVDETTPHIRNISIKNIKATNVRATA 374
Query: 383 NF-TGIQEAPFANICLSNISLSI 404
F G+ EA N+ + N S+
Sbjct: 375 AFIVGLPEANIENVEIENFDWSL 397
>gi|431797010|ref|YP_007223914.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787775|gb|AGA77904.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 455
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 204/444 (45%), Gaps = 53/444 (11%)
Query: 2 KMPVALL--LLLALCSAILIN---GEVSDGQCDDQPTLDPRPHS----VSITEFGAVGDG 52
++PV LL +LLA C +N EVS + P + S IT+FGA D
Sbjct: 4 EIPVFLLAIILLASCDQKKVNVPINEVSVEAPFEMPMIKVPDFSDIQRFVITDFGAEEDD 63
Query: 53 KTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNP 112
+ + A AI + + GG ++ +P+G+W TG +L S++ + LE+GA +L S++P
Sbjct: 64 QQATSQAIVTAI---SAAVEAGGGRIVIPAGEWPTGKIHLKSNINIHLEEGATLLFSEDP 120
Query: 113 SHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSS--- 169
D + + + G+E Y LI + ++ +TG G + + + W WFS
Sbjct: 121 K--DYLPAVKTTWEGMECFN--YSPLIYAFDCENIAITG-KGELKAKMNTWKVWFSRPKA 175
Query: 170 ------------------QSLNYS------RPHLVEFISSENVVVSNLTFLNAPAYNIHP 205
+ N+ RP ++F E V++ + N+P + IHP
Sbjct: 176 HMESLKRLYNLAATDVPVEERNFVNDSSNFRPQFIQFNRCEKVLLEGVKITNSPFWVIHP 235
Query: 206 VYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAY 265
+V I+++ V A + G+ P+ S N+ IE+CI G DAI++KSG ++
Sbjct: 236 FMSKDVVIRDVQVFAHGHN--NDGVDPEMSQNMLIENCIFDQGDDAIAVKSGRNQDAWRL 293
Query: 266 GRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYD--SLNGIEF-RTTKGR 322
PT ++ IR L+++ +A GSE+SGG+ NV +E + + LN + + +T + R
Sbjct: 294 NMPTKNIVIRNSLVKNGH-QLLAIGSELSGGVENVYMENCEVQEGAKLNHLLYVKTNERR 352
Query: 323 GGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP---DALPAIDQITFKDIIGTNIT 379
GGY+R + + + + I+ + D P L I+ I +++ ++
Sbjct: 353 GGYVRNVHMKNIQCGKIDKGVLGIETDVLYQWRDLVPTYERRLTPIENIYMENVRAADVA 412
Query: 380 IAGNFTGIQEAPFANICLSNISLS 403
E+P + L NI +
Sbjct: 413 FVSRIKADPESPVEVVQLKNIQVE 436
>gi|293375683|ref|ZP_06621956.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
gi|292645734|gb|EFF63771.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
Length = 526
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 189/399 (47%), Gaps = 46/399 (11%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+++ F A GDG T +TLA Q AI S D G ++++P G + T + L S+LTL L
Sbjct: 84 LNVKHFNAKGDGITDDTLAIQAAIM---SCPDDG--RVFIPKGTYATKTIFLKSNLTLEL 138
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIEL-----------PGRRYKSLINGYMLRDVVV 149
EKGA +L S + + LP Y + P + +LI G + +V +
Sbjct: 139 EKGATLLYSASFESGAI---LPGYTKNSNHEEYYLGSWEGNPLDTFTALIQGVNVSNVNL 195
Query: 150 TGDNGTIDGQGSV-WWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
G+ G +DG GS+ WWD+ +++ + RP L + I S +V V +T N+P++ +HP++
Sbjct: 196 IGE-GVLDGNGSIGWWDFPKVRNVAW-RPRLFQIIHSHHVNVQGITLQNSPSWTVHPLFS 253
Query: 209 SNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRP 268
++ ++ + P +SP T G+ P+S V I ++G D I++KSG G R
Sbjct: 254 DDLKFIDLKIINPKDSPNTDGLDPESCHRVLILGVHFSVGDDCIAIKSGKIYLGSRLKRA 313
Query: 269 TTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQ 328
+ + IR + G +V GSEM+GG+ ++ VE+ ++ G+ +T +GRG
Sbjct: 314 SEYITIRNCSMNFGHG-AVVIGSEMAGGVKHILVEQCLFNETDRGLRIKTRRGRG---EA 369
Query: 329 IVISDAELYNI---NVAFGACGNCGSHPDDDFDPDAL------------PAIDQITFKDI 373
++ D +I V NC D D + + P I F+DI
Sbjct: 370 AIVEDVTFRHIEMEKVLTPLVVNCFYFCDPDGHSEYVKTKETLPVDYRTPDIRDFCFEDI 429
Query: 374 IGTNITIAGN-FTGIQEAPFANI----CLSNISLSINPG 407
+ IA F G+ E P + C+ + + PG
Sbjct: 430 KCRHSEIAAAYFYGLPEKPIERLSLKDCVFHFTTEAEPG 468
>gi|308185704|ref|YP_003929835.1| polygalacturonase [Pantoea vagans C9-1]
gi|308056214|gb|ADO08386.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 352
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 159/324 (49%), Gaps = 37/324 (11%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
++I +F AV D +L+T A Q AI + G + +P+G++LTG+ L S +TL L
Sbjct: 4 INIIDFAAVPDATSLSTQAIQRAID-----SASAGDTVLIPAGRFLTGALFLKSEMTLEL 58
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIEL--PGRRYKSLINGYMLRDVVVTGDNGTIDG 158
K AV+LGSQ + +P+ GI++ P +++N R+V V G +GT+DG
Sbjct: 59 AKDAVLLGSQRLEDYP---DIPTRVAGIDMVWPA----AMLNINHCRNVTVCG-SGTLDG 110
Query: 159 QGSVWWDWF-------------SSQSLNY------SRPHLVEFISSENVVVSNLTFLNAP 199
QG+VWW F + + L + RP V SE V + + T ++
Sbjct: 111 QGAVWWHKFWGDDETSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSG 170
Query: 200 AYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWD 259
+N+H Y V++Q + V P T GI DSS V +E C ++ D I +KSG
Sbjct: 171 FWNLHVCYSKQVNLQRLRVMNAT-GPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRG 229
Query: 260 EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTT 319
GR D+ IR L SG + GSE SGGI NV +E + G ++
Sbjct: 230 AEAQQLGRTARDIIIRDCTLLKGSG--ITLGSETSGGIENVIIEHNRFSGTGVGFRIKSA 287
Query: 320 KGRGGYIRQIVISDAELYNINVAF 343
+ RGG+I+ IV+ ++ ++ F
Sbjct: 288 RNRGGWIKNIVVRHLKMEDVCYPF 311
>gi|404405418|ref|ZP_10997002.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 1278
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 202/444 (45%), Gaps = 63/444 (14%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRP-HSVSITEFGAVGDGKTLNTLA 59
M + L+L L L +A G+ + Q L P IT+FGA G+ A
Sbjct: 1 MTLKRILILSLLLTAAWNAGARNRAGEIERQIRLVTFPERDFRITDFGAEAGGEADCRPA 60
Query: 60 FQNAIFYLKSFADKGGAQLYVPSGKWLT-GSFNLTSHLTLFLEKGAVILGSQNPSHWDVV 118
AI + +GG ++ +P+G+W + G L SH+ L LE GAV+ S + + D +
Sbjct: 61 VAAAI---DRCSREGGGRVVIPAGRWFSKGPVVLKSHVNLHLEAGAVLFFSSDEA--DYL 115
Query: 119 DPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV-WWDWFSSQSLN---- 173
+ + G E+ Y LI + ++ VTG G IDG+GS + W Q +
Sbjct: 116 PAVLTRWEGTEVYN--YSPLIYAWQATNIAVTG-QGVIDGRGSHNFAHWKPRQKADQKAL 172
Query: 174 -------------------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
Y RP ++E ++ +V++ +TF+++P + IHP+ C NV ++
Sbjct: 173 RRMGTDLVPVSDRLFGEGHYLRPAMLEPVNCTDVLIEGVTFVDSPFWVIHPLACENVTVR 232
Query: 215 NISVHAPPESPYTV---GIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTD 271
++V + Y + G P+S NV IEDC G D I++KSG D GRPT +
Sbjct: 233 GVTVDS-----YNLNNDGCDPESCTNVLIEDCTFRTGDDGIAIKSGRDNDAWRIGRPTEN 287
Query: 272 VHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVI 331
V IR +S + + V GSE+SGG+ NV VE + + D NGI F++ RGGYI + +
Sbjct: 288 VLIRNCSFRSKA-NGVCIGSEISGGVRNVVVENVRMSDVGNGIYFKSNLDRGGYIEDVFV 346
Query: 332 SDAELYNINVAFGACGNCGSHPDDDFDPDAL--------PAIDQITFKDIIGTNITIAG- 382
E ++ F+PD A +D+ AG
Sbjct: 347 CGVEADSVRKTLVL-----------FEPDYKSESRENHPTAFRGFVIEDVRAQWAGKAGI 395
Query: 383 NFTGIQEAPFANICLSNISLSINP 406
+ G + P ++ +S ++L+ P
Sbjct: 396 DIRGFADMPVRDVTISRLTLASTP 419
>gi|436837106|ref|YP_007322322.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384068519|emb|CCH01729.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 777
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 187/438 (42%), Gaps = 77/438 (17%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R + +I +G+ DG TLNT A AI + GG + +P G WLTG L S++
Sbjct: 266 RKDTFNIARYGSKADGITLNTQAINQAI---TRCSQAGGGTVLIPEGLWLTGPLVLRSNV 322
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
L L GA++ S+N + +V + G + R ++ I G L +V +TG +G I
Sbjct: 323 NLHLASGALLQFSRNRDDYPIV---ATTWEGQD--AYRCQAPIWGVDLVNVAITG-SGVI 376
Query: 157 DGQGSVW------------W---------------DWFSS-------------------- 169
DG G VW W W+ S
Sbjct: 377 DGGGEVWRAVKKSKQTASQWAKLVASGGVLDDKKETWYPSAGSMKGAQSPDLARIANGKT 436
Query: 170 -----QSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES 224
+ ++ RP++V + V++ +TF N+PA+ +HP+ C +V ++ ++V +
Sbjct: 437 PAELTEIRDFLRPNMVSLTRCQYVLLDGVTFQNSPAWTLHPLLCEHVTMRGVTVKNQWYA 496
Query: 225 PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSG 284
G+ +S N +E+C G D I++KSG DE G G PT + IR + + G
Sbjct: 497 QNGDGVDLESCRNGLLENCTFDTGDDGITIKSGRDEEGRKRGVPTENFIIRDCRVYQAHG 556
Query: 285 SSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI---NV 341
V GSEMSGG+ N+ V + G+ F+T +GRGG + I +++ + I +
Sbjct: 557 GFV-IGSEMSGGVRNMYVSNCQFMGTDVGLRFKTARGRGGVVENIYVNNISMTQIAGEAI 615
Query: 342 AFGACGNCGSHPDDDFDPDALPAID-------QITFKDIIGTNITIAGNFTGI-----QE 389
F D + LP I+ F+ N++ G TGI E
Sbjct: 616 LFDMYYAAKDPVPQAGDKNELPTIEGKPLNEGTPRFRSFFVHNVSCLGAETGILIRGLPE 675
Query: 390 APFANICLSNISLSINPG 407
P +NI + N L G
Sbjct: 676 MPVSNILIENAVLQTRKG 693
>gi|388495020|gb|AFK35576.1| unknown [Lotus japonicus]
Length = 172
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 293 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSH 352
MSGG+S V E I+++DS + I +T+ GRGGY+R + IS+ L NI++A G G H
Sbjct: 1 MSGGVSEVHAEDIYIFDSRSAIRIKTSPGRGGYVRNVYISNMTLANIDIAIRFTGLYGEH 60
Query: 353 PDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSW 412
PD+ +DPDALP I++IT KD+IG N+ AG GI+ F NICLSNISL+++ S W
Sbjct: 61 PDEAYDPDALPLIERITIKDVIGENVKRAGLIQGIKGYDFVNICLSNISLNVS--SKVPW 118
Query: 413 ECSNIHGSSESVFPEPC-PELENSSSNSSSTCFSL 446
CS++ G S+ V PE C P E S C+ L
Sbjct: 119 NCSDVKGYSDLVSPEVCEPLKERIFPEHWSDCYKL 153
>gi|420246079|ref|ZP_14749578.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
gi|398043755|gb|EJL36633.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
Length = 441
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 166/356 (46%), Gaps = 17/356 (4%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+ I +FGA + N A Q I L G L +P+G+WL+G L SH+ L +
Sbjct: 86 LDIRDFGASPEASN-NAPAIQRTIAALPP-----GGTLRIPAGRWLSGPIFLKSHMALLV 139
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIE----LPGRRYKSLINGYMLRDV-VVTGDNGT 155
E G + + ++ ++ + GR + + Y SLIN R V +
Sbjct: 140 EDGGELAAIASRENFPILPARHADGRILGTWEGVAEACYASLINAIDCRGVHLAGAGIID 199
Query: 156 IDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
G WW W R V + E+V +S LT N+P++ +HPV C + +
Sbjct: 200 GGGDRGDWWSWPKETRQGARRARTVFLSACEDVTLSGLTIRNSPSWTVHPVLCKGLIAAD 259
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
+++ P+SP T G P+SS ++ + I++G D I+LK+G RPT V I
Sbjct: 260 LTIENDPDSPNTDGFNPESSSDIRLVGLHISVGDDCIALKAGKRSPLGGPDRPTEHVRIE 319
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAE 335
L++ G +V GSEMS GIS++ + H + G+ +T +GRGG + I +SD+
Sbjct: 320 NCLMERGHG-AVVIGSEMSAGISDIAIRNCHFKGTDRGLRIKTRRGRGGLVADIRLSDSL 378
Query: 336 LYNIN--VAFGACGNCGSHPDDDFDPDALP---AIDQITFKDIIGTNITIAGNFTG 386
+ ++ VA + C + ++ P +++ + + I N+T++G T
Sbjct: 379 MEDVATPVAVNSFYFCDADGQSNYVQSRSPLPVSVETPSIRSITVENVTVSGARTA 434
>gi|329962420|ref|ZP_08300420.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529976|gb|EGF56864.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 532
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 199/442 (45%), Gaps = 81/442 (18%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGS 89
+QPT +SV+I +FG DG LNT A +AI K+ GG ++ +P G WLTG
Sbjct: 49 EQPTFPE--YSVNIVDFGGKNDGVALNTQAINDAI---KAVNAHGGGKVIIPEGIWLTGP 103
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
L S++ L+ EK A+++ + + S + ++ + G++ RR +S I+ ++ +
Sbjct: 104 IELLSNVNLYTEKNALVVFTDDFSAYPIIK---TSFEGLDT--RRCQSPISARNAENIAI 158
Query: 150 TGDNGTIDGQGSVW------------WD-------------WFSS----------QSLN- 173
TG G DG G W W+ W+ + ++ N
Sbjct: 159 TG-YGVFDGSGDSWRPVKKGKLTASQWEALVKSGGVVDKSIWYPTAGALKGALACKNFNN 217
Query: 174 ---------------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISV 218
+ RP L+ + S+ V++ +TF N+P++ +HP+ C ++ I N+ V
Sbjct: 218 PEGIDTDEEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKV 277
Query: 219 HAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVL 278
P S + +S N I + I G DAI +KSG DE G G P +V ++
Sbjct: 278 FNPWYSQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVVVKDNT 337
Query: 279 LQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYN 338
+ G V GSEMSGG+ N+ V + G+ F++T+GRGG + I I + + +
Sbjct: 338 VLHGHGGFVV-GSEMSGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHMID 396
Query: 339 I-------NVAFGACGNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN--- 383
I ++ +G G + + I +T F+DI +++ G
Sbjct: 397 IPHEPLLFDLFYGGKA-AGEETETELAGRMKANIPPVTVETPAFRDIHISHVICKGAGRA 455
Query: 384 --FTGIQEAPFANICLSNISLS 403
F G+ E P N+ + N+ +S
Sbjct: 456 MFFNGLPEMPINNVSVKNVVIS 477
>gi|423301929|ref|ZP_17279952.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
gi|408471020|gb|EKJ89552.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
Length = 546
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 196/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA GDG LNT A +AI K GG ++ +P G WLTG L S++ L
Sbjct: 57 YEVNIEKFGAKGDGLFLNTKAINDAI---KDVNQHGGGKVIIPEGIWLTGPIELLSNVNL 113
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ A++L + + + ++ + G+E RR +S I+ ++ +TG GT DG
Sbjct: 114 YTERNALVLFTGDFEAYPII---ATSFEGLET--RRCQSPISARNAENIAITG-YGTFDG 167
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W W+ + + +N
Sbjct: 168 NGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTPGSLKGAMACKDFNVPEGINTD 227
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ S+ +++ +TF N+P++ +HP+ C + + NI V P S
Sbjct: 228 EEWNEIRPWLRPVLLSIAKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQ 287
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
I +S N I + + G DAI +KSG DE G G P +V ++ + G
Sbjct: 288 NGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGG 347
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 348 FVV-GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLL 406
Query: 339 INVAFGACGNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G ++D A+P + + T F++I +NI G+ F G+
Sbjct: 407 FDLFYGGKG-AGEESEEDLLNRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 465
Query: 389 EAPFANICLSNISLS 403
E P N+ + ++ ++
Sbjct: 466 EMPITNVTVKDVVMT 480
>gi|390956451|ref|YP_006420208.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390411369|gb|AFL86873.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 423
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 186/388 (47%), Gaps = 42/388 (10%)
Query: 38 PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLT 97
PH+ +GA DGKT +T A Q AI + A K G + + G +L+G L S LT
Sbjct: 26 PHA-----YGAKADGKTKDTAAIQKAI---EICAPKHGT-VILKGGTFLSGPLTLRSDLT 76
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG---DNG 154
L ++KGA +LGS++ +D P E R +L++ + ++ VTG + G
Sbjct: 77 LEIDKGATLLGSRD------IDDYPLR----EDAKWRRVALLHADHVSNLRVTGGKTEGG 126
Query: 155 TIDGQGSVWWDWF--------SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
IDG G ++W+ +S S Y RP LV+ S+++ ++T N+P YN+
Sbjct: 127 IIDGSGDIFWEMARTHRVPNDTSGSGGYPRPMLVDITESQHLTFDHITLQNSPMYNLTFF 186
Query: 207 YCSNVHIQNISVHAPPES-PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAY 265
+C + I + + P ++ P T GI P SS N+ I I G D I+LKSG E
Sbjct: 187 FCDGIKIDHTIIRNPAKTGPNTDGIDPFSSKNIEISYVDIDTGDDDIALKSGLVERDPKI 246
Query: 266 GRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGY 325
G P V+I + + G SV GSE++GGIS+V+VE I + ++ G+ ++ + RG
Sbjct: 247 G-PVEHVYIHDSIFRHGHGLSV--GSELAGGISDVRVENIVMENTDAGVRIKSNRTRGND 303
Query: 326 IRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITIAGN 383
I + + ++ + P D A+D T F DI NIT G
Sbjct: 304 IHDLHYKNIQMTGVGQPIQITEYYPKWP--AAGTDTAKAVDAHTPRFHDISLENITATGA 361
Query: 384 ----FTGIQEAPFANICLSNISLSINPG 407
GI E P N+ L+ IS+S G
Sbjct: 362 KDAIIIGIPEYPIQNLTLTKISISGEKG 389
>gi|160880699|ref|YP_001559667.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429365|gb|ABX42928.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 474
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 178/427 (41%), Gaps = 72/427 (16%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
VSIT++ AV G NT A AI L GG + VP G WLTG L S++ L
Sbjct: 14 RQVSITDYKAVSGGIESNTAAINQAITELSKL---GGGTVNVPEGIWLTGPITLKSNINL 70
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LEKGA+I +NP + ++ L +Y P R S I+ + ++ +TG+ G IDG
Sbjct: 71 HLEKGALITFDKNPEEYPII--LTNYEGQ---PRLRAVSPIHAFDEENIAITGE-GVIDG 124
Query: 159 QGSVW------------WD-----------------WFSSQSL----------------- 172
G W W W+ S++
Sbjct: 125 NGHEWRPLKEFKVTKKQWQARLKKSPYVIDTKEGGIWYPSKTSYEGCLEGEVSVEDPDAL 184
Query: 173 -----NYS--RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
NY RP + + +++ +T N+PA+N+HP+ C+N+ ++N + +
Sbjct: 185 KKAAPNYDLYRPVMTNLVRCNKILIEGVTLQNSPAWNLHPLLCTNLTLRNAFIRNANFAQ 244
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
G+ +S V I +G DAI +KSG + G PT V IR ++ G
Sbjct: 245 NGDGLDLESCRFVDIYGVKFDVGDDAICIKSGKNAIGRKITVPTEHVRIRDCVVYHGHGG 304
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVI---------SDAEL 336
V GSEMS G+ +V +E + GI F++ GRGG + I I DA +
Sbjct: 305 FV-IGSEMSRGVRDVVIENCLFLGTDTGIRFKSAIGRGGVVEDITIRNIQMTDIEEDAII 363
Query: 337 YNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 396
+ + + S D + +P IT +D+ A G+++ P +I
Sbjct: 364 FTMGYTLFRLDHQASDEPDTISKEDIPEFKNITIRDVNCLRAGQAIKIDGLEQMPIHDII 423
Query: 397 LSNISLS 403
L N+ +
Sbjct: 424 LENVMIQ 430
>gi|374313032|ref|YP_005059462.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
gi|358755042|gb|AEU38432.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
Length = 420
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 176/383 (45%), Gaps = 41/383 (10%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
+ FGA GDG T +T+A Q AI + K G + + G +L+G +L S++TL + +
Sbjct: 27 VRAFGAKGDGTTKDTVAIQKAIDTCAGY--KKGGVVKLSGGIFLSGPISLKSNITLDIAE 84
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
GA +LGS + + P ++ R + + L+ ++ +TG GTIDG G +
Sbjct: 85 GATLLGSPDREDY----PKVTFARQPTV-----QPLVGSVNAENITITG-GGTIDGNGHI 134
Query: 163 WWDWFSSQSL------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
WW++ + ++ RP + F S+++ V +T NA + I P Y ++ +N+
Sbjct: 135 WWEYVHAVKEAGVLGNDHPRPMGLVFDHSKHIRVEGITVQNAGFWQIVPYYADDLVFRNL 194
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+ AP SP T I P SS N+ I+ ++G D +++KSG A P D +
Sbjct: 195 KILAP-HSPNTDAIDPFSSSNIVIDHVFSSVGDDNVAIKSG------AINSPGPDAPSKN 247
Query: 277 VLLQS---SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD 333
+ + +G ++ GSE++GG+ NV E+IH + GI + + RG + I D
Sbjct: 248 ITITDCTFENGHGLSIGSEIAGGVQNVHAERIHFKGTDQGIRIKANRDRGNDVSNISFKD 307
Query: 334 AELYNINVAF---------GACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNF 384
++ ++ A G S P P I +++ T AG
Sbjct: 308 IDMVDVKTAILITEYYPKAAPDGEVPSMPMGRL----TPRFHDIAIENVHATGSGSAGTI 363
Query: 385 TGIQEAPFANICLSNISLSINPG 407
G+ E+P + L N+ L G
Sbjct: 364 VGLPESPVEGLSLKNVDLQAKTG 386
>gi|393781473|ref|ZP_10369668.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
gi|392676536|gb|EIY69968.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
Length = 537
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 200/443 (45%), Gaps = 81/443 (18%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGS 89
+QPT + V+I +GA DGK LNT A NAI K+ KGG ++ +P G WLTG
Sbjct: 48 EQPTFPD--YEVNIVAYGAKNDGKFLNTEAINNAI---KAVNAKGGGKVIIPEGLWLTGP 102
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
L S++ L+ E+ A+IL + + + +++ + G+E RR +S I+ ++ +
Sbjct: 103 IVLLSNVNLYTERNALILFTDDFEAYPIIN---TSFEGLET--RRCQSPISARNAENIAI 157
Query: 150 TGDNGTIDGQGSVW------------WD---------------WFSS------------- 169
TG GT DG G W W W+ +
Sbjct: 158 TG-YGTFDGAGDSWRPVKKDKLTASQWGKLVKSGGVTDSAGKIWYPTAGALKGALACKDF 216
Query: 170 ---QSLN----------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
+ +N + RP L+ + S+ V++ +TF N+P++ +HP+ C ++ + N+
Sbjct: 217 NVPEGINTDEEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITVNNV 276
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
V P S + +S N I + + G DAI +KSG D G G P +V ++
Sbjct: 277 KVFNPWYSQNGDALDLESCKNALIINSLFDAGDDAICIKSGKDADGRRRGEPCQNVLVKN 336
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QI 329
++ G V GSEMSGG+ N+ V + G+ F++T+GRGG + +
Sbjct: 337 NIVLHGHGGFVV-GSEMSGGVKNIYVTDCTFMGTDVGLRFKSTRGRGGVVEGIYINNINM 395
Query: 330 VISDAELYNINVAFGACGNCGSHPDD---DFDPDALPAIDQI-TFKDIIGTNITIAGN-- 383
+ E ++ +G G ++ + D P ++ F+DI +N+ G+
Sbjct: 396 INIPNEPLLFDLFYGGKGPGEETEEERAANTKTDVPPVTEETPAFRDIHISNVYCKGSGR 455
Query: 384 ---FTGIQEAPFANICLSNISLS 403
F G+ E P N+ + N+ ++
Sbjct: 456 AMFFNGLPEMPIRNVTVKNVVIT 478
>gi|312130362|ref|YP_003997702.1| glycoside hydrolase [Leadbetterella byssophila DSM 17132]
gi|311906908|gb|ADQ17349.1| glycoside hydrolase family 28 [Leadbetterella byssophila DSM 17132]
Length = 775
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 163/353 (46%), Gaps = 56/353 (15%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R + +I +GA DG T+NT A AI + GG + +P+G W+TG L S++
Sbjct: 264 RKDTFNIVRYGAKADGFTVNTTAIAQAIDLAH---EAGGGTVLIPAGVWVTGPLKLKSNV 320
Query: 97 TLFLEKGAVILGSQNPSHWDVVDP---------------------LPSYGRGI-----EL 130
L L+KGA++ S N + +V+ + G+GI E+
Sbjct: 321 NLHLQKGALLQFSNNRDDYPIVETTWEGQKALRCHAPIWAVGQVNIAITGQGIMDGSGEV 380
Query: 131 PGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD-----------------WFSSQSL- 172
+ K+ + R +V +G G + +G W+ W ++L
Sbjct: 381 WKQVKKNKLTSTQWRKLVESG--GVVGKKGDAWYPSEQSRYGNEDVRDWANLWVEGKTLE 438
Query: 173 ------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPY 226
++ RP+++ ENV++ +TF N+PA+ +HP+ ++ ++N++V P
Sbjct: 439 DYMTVKDFLRPNMISITECENVLIEGVTFQNSPAWTLHPLLSKHITLRNVNVRNPWFGQN 498
Query: 227 TVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSS 286
+ +S ++ C G DAI+LKSG DE G G PT +V I+ + G
Sbjct: 499 NDALDLESCSYAIVDGCTFDTGDDAITLKSGRDEQGRKRGVPTENVIIKNTTVFHGHGGF 558
Query: 287 VAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI 339
V GSEMSGG+ NV V+ + G+ F+T + RGG + I IS+ + NI
Sbjct: 559 V-IGSEMSGGVKNVFVDNCSFLGTDIGLRFKTKRDRGGVVENIYISNIAMNNI 610
>gi|254785604|ref|YP_003073033.1| glycoside hydrolase family 28 domain-containing protein
[Teredinibacter turnerae T7901]
gi|237685733|gb|ACR12997.1| glycoside hydrolase family 28 domain protein [Teredinibacter
turnerae T7901]
Length = 467
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 180/406 (44%), Gaps = 53/406 (13%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
QP + P I +GAV DG++L+T A +AI GG ++ VP+G +LTG+
Sbjct: 44 QPPVFP-DRQFDIQHYGAVADGQSLSTGAINSAIIACHK---AGGGRVLVPAGHYLTGAV 99
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
+L S++ L L + A + S++P+ D + + + G+E G Y LI Y ++ +T
Sbjct: 100 HLLSNVELHLAENARLSFSRDPN--DYLPAVFTRWEGVEYMG--YSPLIYAYQAENIGIT 155
Query: 151 GDNGTIDGQGSV--WWDW----------FSSQSL-----------------------NYS 175
G G +DG S WW W F+SQ +Y
Sbjct: 156 G-TGVLDGSASEMHWWPWKGTSEWARPGFASQDNSRAQLFAQAEAGVPPRQRHYSDGHYL 214
Query: 176 RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSS 235
RP ++ NV++ ++T +NAP + +HPV C NV + + H P + G P+S
Sbjct: 215 RPPFIQPYQCRNVLLEDVTIINAPFWLVHPVLCDNVTARRL--HLQSLGPNSDGCNPESC 272
Query: 236 DNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSG 295
NV IE C G D I++KSG + G P+ ++ IR +++ G V GSE+SG
Sbjct: 273 RNVLIEHCFFDTGDDCIAIKSGRNADGRRLNIPSENIVIRHCEMRAGHG-GVVIGSEISG 331
Query: 296 GISNVQVE--KIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHP 353
G+ NV ++ D G +T RGG I I + D ++ + A +
Sbjct: 332 GVRNVYAHDNRMSSPDLERGFRIKTNSVRGGLIENIYLRDIQIGQVKDAIVINFHYEEGD 391
Query: 354 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
FD P + I +I + G AP + ++N
Sbjct: 392 AGKFD----PTVRNINLDNISCEHAQQVFQIRGFDRAPIKQLSITN 433
>gi|345299336|ref|YP_004828694.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093273|gb|AEN64909.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 430
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 177/371 (47%), Gaps = 54/371 (14%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKG-GAQLYVPSGKWLTGSFNLTSHLTLFL 100
++ +FGA G+ ++T A Q AI A G L +P+G++LTGS L S +TL L
Sbjct: 5 NVCDFGADPSGRQVSTAAIQRAI------AKTGHNDTLVIPAGRFLTGSLFLKSGMTLHL 58
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
E GA +LGSQ+ + ++D + GI++ R ++IN DV +TG GTIDGQG
Sbjct: 59 EAGAQLLGSQSLDDYPLIDTRVA---GIDM--RWPAAIINIINCHDVSITG-GGTIDGQG 112
Query: 161 SVWWDWF-------------SSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAY 201
VWW F S++ L + RP + SE + + + T + +
Sbjct: 113 LVWWQRFWGDDEQGGMLGDYSARGLRWVVDYDCQRPRNILVYESERITLRDFTSRESGFW 172
Query: 202 NIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEY 261
N+H Y ++ + ++ + + P T GI DS + V +E C+++ D I +K+G +
Sbjct: 173 NVHLCYSRHITLDSVQI-SNSAGPSTDGIDIDSCEQVRVERCVVSCNDDNICIKAGRGQE 231
Query: 262 GIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKG 321
+ R D+ IR +SGS + GSE SGGI V +E + G ++ +
Sbjct: 232 AASKARSARDIVIRDCT--PNSGSGITLGSETSGGIERVLIEHNRFNGTGVGFRIKSARN 289
Query: 322 RGGYIRQIVISDAELYNINV------------AFGACGNCGSHPD------DDFDPDA-L 362
RGG+IR I + +L ++ ++G G+ PD DD +A L
Sbjct: 290 RGGFIRDIKVRHLQLVDVRFPVMIQLNWFAQYSYGERGDLTDKPDHWRKLADDVQGEAGL 349
Query: 363 PAIDQITFKDI 373
+ +T ++I
Sbjct: 350 THVSNLTLENI 360
>gi|218133835|ref|ZP_03462639.1| hypothetical protein BACPEC_01724 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991210|gb|EEC57216.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 521
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 188/394 (47%), Gaps = 44/394 (11%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++++ +FGA G+G+ +T A Q AI ++ VP+G++ S L S +TL
Sbjct: 85 TLNVKDFGAYGNGEHDDTNAIQCAIMSCPK-----AGRILVPAGEYKISSIFLKSDITLD 139
Query: 100 LEKGAVILGSQNPSHWDVV-DPLPSYGRGIEL--------PGRRYKSLINGYMLRDVVVT 150
L KGAV+ + ++ + SY E P + +++ G + +VV+T
Sbjct: 140 LAKGAVLSAFTEREKFPILPGVIESYDETDEYNLGSWEGNPLDCFSAIVCGINVENVVIT 199
Query: 151 GDNGTIDGQGSVWWDWFSSQSLNYS-RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
G+ GTIDG W++ + N + RP L NV + +T N+P++ +HP +
Sbjct: 200 GE-GTIDGNAGFDNWWYNVKVRNIAWRPRLFFINHCRNVTMHGITVQNSPSWTLHPYFSD 258
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
++ ++ + P S T G+ P+S +V + I++G D I++KSG G + PT
Sbjct: 259 HLKFIDVKIKNPANSHNTDGLDPESCTDVRVLGTYISVGDDCIAIKSGKIYMGRKHKIPT 318
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQI 329
+D+ +R+ ++ G +V GSE++ G+ +V + ++ G+ +T +GRG R
Sbjct: 319 SDMEVRQCCMRDGHG-AVTVGSEIAAGVKDVHIRDCIFMNTDRGLRVKTRRGRG---RDS 374
Query: 330 VISDAELYNINV----------AFGACGNCGSH---------PDDDFDPDALPAIDQITF 370
V+ D NI + +F C G P D D PAI ++TF
Sbjct: 375 VLDDISFENITMDNVMTPFVVNSFYFCDPDGKTEYVATSKALPVD----DRTPAIKRLTF 430
Query: 371 KDIIGTNITIAGNF-TGIQEAPFANICLSNISLS 403
KDI TN +AG + G+ E+ + N+ +S
Sbjct: 431 KDIKATNCHVAGAYICGLPESKIERLTFENVDIS 464
>gi|160880868|ref|YP_001559836.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429534|gb|ABX43097.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 518
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 189/391 (48%), Gaps = 38/391 (9%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++++ EFGA GDG +T Q AI + K G ++ +P G + + L S L L
Sbjct: 81 TLNVKEFGAKGDGVHDDTTMIQCAI----NSCPKNG-RVLIPEGCYKISTLFLKSDLRLE 135
Query: 100 LEKGAVILGSQNPSHWDVV-------DPLPSYGRGIEL--PGRRYKSLINGYMLRDVVVT 150
L +GAV+ + S + ++ D Y G P + +I G + +V +T
Sbjct: 136 LGRGAVLSAFTDRSKFPILPGRIESFDETEEYNLGSWEGNPLDSFAGIITGINVSNVEIT 195
Query: 151 GDNGTIDG--QGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
G+ GTIDG + WW+ +++ + RP L+ N+ V +T N+P +NIHP +
Sbjct: 196 GE-GTIDGCADETNWWNNPKVRNIAW-RPRLIFLNHCNNITVQGITVKNSPCWNIHPYFS 253
Query: 209 SNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRP 268
++ ++++ P +SP T G+ P+S NV I ++G D I++KSG G + RP
Sbjct: 254 DDLKFVDLTILNPKDSPNTDGLDPESCKNVLIVGVYFSLGDDCIAIKSGKIYMGAKHKRP 313
Query: 269 TTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQ 328
+ ++ IR+ ++ G S+ GSEM+GG+ N+ V + + G+ +T +GRG +
Sbjct: 314 SENLEIRQCCMRDGHG-SITIGSEMAGGVKNLTVRECLFIHTDRGLRIKTRRGRG---KD 369
Query: 329 IVISDAELYNI---NVAFGACGNCGSHPDDD--------FDP----DALPAIDQITFKDI 373
+I NI +V NC D D +P D P I ++TF+++
Sbjct: 370 AIIDGVLFENIRMDHVMTPVVINCFYFCDPDGHSEYVQSKNPYEVDDRTPHIGELTFRNL 429
Query: 374 IGTNITIAGNFT-GIQEAPFANICLSNISLS 403
TN A ++ G+ E I N+++S
Sbjct: 430 DCTNCHAAASYMYGLPEQKIEKITFENVNIS 460
>gi|255536015|ref|YP_003096386.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
gi|255342211|gb|ACU08324.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
Length = 491
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 205/476 (43%), Gaps = 80/476 (16%)
Query: 3 MPVALLLLLALCSAILINGEVSDGQCDDQPT----------LDP--RPHSVSITEFGAVG 50
M + L+ L CSA N ++ G D P +P R + +I +GAV
Sbjct: 20 MAFSALVFLYACSAAS-NNAIAIGSTDSFPMERMLELEKSIKEPKFRDANYNIVSYGAVA 78
Query: 51 DGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQ 110
DGKT+ T + + AI + + GG ++ VPSGK+L+G +L +++ L L +GA IL S
Sbjct: 79 DGKTMATESIRKAIL---ACSKDGGGKVIVPSGKFLSGPIHLENNVNLHLMEGAEILFST 135
Query: 111 NPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS--VWWDWFS 168
NP D + + G+EL Y LI +++ VTG G ++GQ S WW W
Sbjct: 136 NPD--DFYPLVHTSFEGMEL--MNYSPLIYAKNKKNIAVTGK-GILNGQASNDNWWTWKG 190
Query: 169 SQSL------------------------------------NYSRPHLVEFISSENVVVSN 192
S + Y RP+ +E ENV++
Sbjct: 191 SSAYGFKPGMPSQLDPNNLPKLMEMADTNVPVSNRTFGNGRYLRPNFIEPFECENVLIQG 250
Query: 193 LTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAI 252
+T +NAP + +HP+ N+ + +++ + P G+ P+ S NV I++ I G D I
Sbjct: 251 ITIINAPFWILHPIKSKNIIVDGVNIRS--HGPNNDGLDPEYSQNVLIKNSIFNTGDDCI 308
Query: 253 SLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL- 311
++K+G DE G G T ++ +R + G V GSEMS G+ NV V H+ DS
Sbjct: 309 AIKAGRDEEGRRVGIMTENIIVRDCKMIDGHG-GVVIGSEMSAGVRNVFVYNNHM-DSPE 366
Query: 312 --NGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP------DALP 363
I +T RGG + + + N+ G H ++ + P
Sbjct: 367 LDRAIRLKTNNVRGGVVDGVYVK-------NLTVGEVKEAVLHITMNYKDYKNRTGNFTP 419
Query: 364 AIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSINPGSYNSWECSNIH 418
I I +D+ N F G++ + NI N+++ ++N N+
Sbjct: 420 QIRNILLEDVKVKNGGKYAIFADGLENSKIQNITFKNVTIDKVKANFNVKFVENLK 475
>gi|304396605|ref|ZP_07378486.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304356114|gb|EFM20480.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 430
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 158/324 (48%), Gaps = 37/324 (11%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
++I +F AV D +L+T A Q AI + G + +P+G++LTG+ L S +TL L
Sbjct: 4 INIIDFAAVPDATSLSTQAIQRAID-----SASAGDTVLIPAGRFLTGALFLKSEMTLEL 58
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIEL--PGRRYKSLINGYMLRDVVVTGDNGTIDG 158
K A++LGSQ + +P+ GI++ P +++N R+V V G +GT DG
Sbjct: 59 AKDAMLLGSQRLEDYP---DIPTRVAGIDMVWPA----AMLNINHCRNVTVCG-SGTFDG 110
Query: 159 QGSVWWDWF-------------SSQSLNY------SRPHLVEFISSENVVVSNLTFLNAP 199
QG+VWW F + + L + RP V SE V + + T ++
Sbjct: 111 QGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSG 170
Query: 200 AYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWD 259
+N+H Y V++Q + V P T GI DSS V +E C ++ D I +KSG
Sbjct: 171 FWNLHVCYSKQVNLQRLRVMNAT-GPSTDGIDIDSSQLVRVESCTVSCNDDNICVKSGRG 229
Query: 260 EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTT 319
GR D+ IR L SG + GSE SGGI NV +E + G ++
Sbjct: 230 AEAQQLGRTARDIIIRDCTLLKGSG--ITLGSETSGGIENVIIEHNRFSGTGVGFRIKSA 287
Query: 320 KGRGGYIRQIVISDAELYNINVAF 343
+ RGG+I+ IV+ ++ ++ F
Sbjct: 288 RNRGGWIKNIVVRHLKMEDVCYPF 311
>gi|260642009|ref|ZP_05414289.2| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623835|gb|EEX46706.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 546
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 197/435 (45%), Gaps = 81/435 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ V+I +FGA GDG LNT A +AI K GG ++ +P G WLTG L S++ L
Sbjct: 57 YEVNIEKFGAKGDGLFLNTKAINDAI---KDVNQHGGGKVIIPEGIWLTGPIELLSNVNL 113
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ E+ A++L + + + ++ + G+E RR +S I+ ++ +TG GT DG
Sbjct: 114 YTERNALVLFTGDFEAYPII---ATSFEGLET--RRCQSPISARNAENIAITG-YGTFDG 167
Query: 159 QGSVW------------WD---------------WFSS----------------QSLN-- 173
G W W W+ + + +N
Sbjct: 168 NGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTPGSLKGAMACKDFNVPEGINTD 227
Query: 174 --------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
+ RP L+ + S+ +++ +TF N+P++ +HP+ C + + NI V P S
Sbjct: 228 EEWNEIRPWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQ 287
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
I +S N I + + G DAI +KS DE G G P +V ++ + G
Sbjct: 288 NGDAIDLESCKNALIINSVFDAGDDAICIKSDKDEDGRRRGEPCQNVIVKNNTVLHGHGG 347
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR-------QIVISDAELYN 338
V GSEMSGG+ N+ VE + G+ F++T+GRGG + ++ E
Sbjct: 348 FVV-GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLL 406
Query: 339 INVAFGACGNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQ 388
++ +G G G ++D A+P + + T F++I +NI G+ F G+
Sbjct: 407 FDLFYGGKG-AGEESEEDLLNRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 465
Query: 389 EAPFANICLSNISLS 403
E P +N+ + ++ ++
Sbjct: 466 EMPISNVTVKDVVMT 480
>gi|338211743|ref|YP_004655796.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
gi|336305562|gb|AEI48664.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
Length = 781
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 189/444 (42%), Gaps = 87/444 (19%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R + +I +GA DG T+NT A AI ++ GG + VP+G WLTG L +++
Sbjct: 267 RKDTFNICRYGAKADGLTVNTKAISQAI---EACHAAGGGTVLVPAGLWLTGPIVLKNNV 323
Query: 97 TLFLEKGAVILGSQNPSHWDVV----DPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGD 152
L + K A++ S+N + +V + SY R ++ I G L ++ +TG+
Sbjct: 324 NLHIAKNALLQFSRNHDDYPIVITTWEGQESY---------RCQAPIWGVDLTNIGITGE 374
Query: 153 NGTIDGQGSVW------------WD---------------WFSSQS-------------- 171
G +DG G VW W W+ S+
Sbjct: 375 -GVLDGGGEVWRAIKRDKQTNTQWANLLRSGGVVSEKGDLWYPSEKSKKGNNLPNAGRIL 433
Query: 172 -------------LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISV 218
++ RP+++ +NV++ +TF N+PA+ +HP+ C +V I+N++V
Sbjct: 434 NGIHPTPTELESYKDFLRPNMISLTRCKNVLLEGVTFQNSPAWTMHPLLCEHVSIRNVTV 493
Query: 219 HAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVL 278
+ + + +S N +E C G D I++KSG DE G G PT + I+
Sbjct: 494 KNHWYAQNSDALDLESCRNGIVEGCTFDTGDDGITIKSGRDEQGRKRGVPTENFIIKDCK 553
Query: 279 LQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYN 338
+ + G V GSEMSGG+ N+ V S G+ F+T +GRGG + I ++D +
Sbjct: 554 VYHAHGGFV-IGSEMSGGVRNMFVSNCTFMGSDVGLRFKTARGRGGVVEDIYVTDVNMTE 612
Query: 339 I-------NVAFGAC------GNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGN 383
I ++ + A G P +P + P K+II A
Sbjct: 613 IPGEAILFDMYYAAKDPVPQEGESNELPAIKAEPLNEGTPQFKNFYLKNIICRGAETAIL 672
Query: 384 FTGIQEAPFANICLSNISLSINPG 407
G+ E NI + N + N G
Sbjct: 673 VRGLPEMSIKNINVENAVIEANKG 696
>gi|440760701|ref|ZP_20939804.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425454|gb|ELP23188.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 430
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 158/324 (48%), Gaps = 37/324 (11%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
++I +F AV D +L+T A Q AI + G + +P+G++LTG+ L S +TL L
Sbjct: 4 INIIDFAAVPDATSLSTQAIQRAID-----SASAGDTVLIPAGRFLTGALFLKSEMTLEL 58
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIEL--PGRRYKSLINGYMLRDVVVTGDNGTIDG 158
K A++LGSQ + +P+ GI++ P +++N R+V V G +GT DG
Sbjct: 59 AKDAMLLGSQRLEDYP---DIPTRVAGIDMVWPA----AMLNINHCRNVTVCG-SGTFDG 110
Query: 159 QGSVWWDWF-------------SSQSLNY------SRPHLVEFISSENVVVSNLTFLNAP 199
QG+VWW F + + L + RP V SE V + + T ++
Sbjct: 111 QGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSG 170
Query: 200 AYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWD 259
+N+H Y V++Q + V P T GI D+S V +E C ++ D I +KSG
Sbjct: 171 FWNLHVCYSKQVNLQRLRVMNAT-GPSTDGIDIDTSQLVRVESCTVSCNDDNICVKSGRG 229
Query: 260 EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTT 319
GR D+ IR L SG + GSE SGGI NV +E + G ++
Sbjct: 230 AEAQQLGRTARDIIIRDCTLLKGSG--ITLGSETSGGIENVIIEHNRFSGTGVGFRIKSA 287
Query: 320 KGRGGYIRQIVISDAELYNINVAF 343
+ RGG+I+ IV+ ++ ++ F
Sbjct: 288 RNRGGWIKNIVVRHLKMEDVCYPF 311
>gi|408501393|ref|YP_006865312.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
gi|408466217|gb|AFU71746.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
Length = 437
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 171/393 (43%), Gaps = 54/393 (13%)
Query: 59 AFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVV 118
+ Q AI +L G L +P G TG L S LT+ LEKGAV+ +P +
Sbjct: 15 SIQEAIDHLAKC--DGARVLTIPKGTTETGPLELISDLTIILEKGAVLKFKDDPH---LY 69
Query: 119 DPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSS--------- 169
P+ + GIE L+ ++ + G+ G IDG G+ WW F+
Sbjct: 70 KPIWTRWEGIEC--HAMHPLLYAADCHNITIDGE-GIIDGNGAWWWRTFAQIERTDRTQP 126
Query: 170 ------------------------QSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHP 205
S + RP L++F V + +T N+P + IH
Sbjct: 127 QEDYELELARLNPDYKERAGGGARPSTQFLRPPLIQFWKCTAVKLKGITVQNSPFWTIHF 186
Query: 206 VYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAY 265
VYC+ V I ++V P + T + DSS NV + + + +G DAI+LKSG G+
Sbjct: 187 VYCTQVTIDGVTVRNPANAINTDALDIDSSTNVAVSNSLFDVGDDAITLKSGSGPDGLRV 246
Query: 266 GRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGY 325
+PT V+++ + +S G +A GSE +GGI++V VEK + GI ++ +GRGG
Sbjct: 247 NKPTAHVNVKDCTILASHG-GIAIGSETAGGINDVNVEKCTFSGTQRGIRLKSRRGRGGT 305
Query: 326 IRQIVISDAELYN--INVAFGACGNCGSHPDDD---FDPDALPA------IDQITFKDII 374
I+ I + E+ + + G G P ++ A P I I +D+
Sbjct: 306 IKGITLRHLEMDHCWCPIVLGMYFAPGVLPQEEDYVLSKSAQPVEATTPHIRNIRIEDVR 365
Query: 375 GTNITIAGNF-TGIQEAPFANICLSNISLSINP 406
N+ F G+ E+P N+ + + P
Sbjct: 366 ADNVRSTAAFIVGLPESPIENVSIDQFEWHLAP 398
>gi|325106423|ref|YP_004276077.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975271|gb|ADY54255.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 482
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 184/406 (45%), Gaps = 65/406 (16%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
IT++GA D +T A + AI ++ GG ++ VP G +L+G +L S++ L LE
Sbjct: 56 KITDYGASLDSTVKSTEAIRKAI---EACHTNGGGRVIVPKGTFLSGPIHLKSNVNLHLE 112
Query: 102 KGAVILGSQNPSHWDVVDPLP-SYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
GA IL S+ DV D P + R + Y LI Y ++ +TG NG +DG
Sbjct: 113 DGAKILFSR-----DVNDYKPLVFSRWEGMECMNYSPLIYAYEQENIAITG-NGILDGNA 166
Query: 161 S--VWWDWFSSQSL----------------------------------NYSRPHLVEFIS 184
+ WW W + + +Y RP ++
Sbjct: 167 NNEYWWPWKAKKEYGWKEGIPNQLAAVKILTQQVKDLVPARERIHGDGSYLRPPFIQPYL 226
Query: 185 SENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCI 244
S+NV+++++ +NAP +NI+PV C NV ++N+ V P G P+S NV I C
Sbjct: 227 SKNVLIADVKIINAPFWNINPVLCENVTVRNVKVVT--HGPNNDGCDPESCKNVLITGCY 284
Query: 245 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 304
G D I++KSG +E G RP + I ++ G V GSE+SGG N+ +
Sbjct: 285 FDTGDDCIAIKSGRNEDGRNIARPAENHIIENCEMKDGHG-GVVIGSEISGGARNIFAQN 343
Query: 305 IHLYDSLNG---IEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDA 361
+ + DS N + +T+ RGG I + + + E+ A C P D
Sbjct: 344 L-IMDSPNLDRILRLKTSSLRGGIIENVYMRNVEVGTYKEAAILCDMFYEKPG-----DF 397
Query: 362 LPAIDQITFKDIIGTNITIAGNF----TGIQEAPFANICLSNISLS 403
LP I I+ +++ NI G F +E+P N+ +SN +++
Sbjct: 398 LPTIRNISVENL---NIKQGGKFGVLINAYKESPVENLRISNSTIN 440
>gi|414864495|tpg|DAA43052.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 216
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 80/115 (69%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R H +TE+GAVGDG+TLNT AF A+ L A GGA L VP GKWLTG FNLTS
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG 151
TL+L++GA IL SQ+ HW ++ PLPSYGRG + PG RY + I G L DV++TG
Sbjct: 101 TLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITG 155
>gi|212695103|ref|ZP_03303231.1| hypothetical protein BACDOR_04641 [Bacteroides dorei DSM 17855]
gi|212662419|gb|EEB22993.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 532
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 199/415 (47%), Gaps = 41/415 (9%)
Query: 38 PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLT 97
P +I +FGAVGDGK+L+T A Q AI +K G + VP G +LTG+ S++T
Sbjct: 115 PKYFNIKDFGAVGDGKSLDTKAIQQAI----DACNKQGI-VVVPKGVYLTGALFFKSYMT 169
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYML-----RDVVVTGD 152
L++E+GA++ GS + +H+ +V S GIE G +Y SLING L ++ + G
Sbjct: 170 LYIEEGAILKGSSDLAHYPIV---RSRFEGIE--GSQYASLINGGTLLSGGIQEFSIRG- 223
Query: 153 NGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVH 212
G ID G + + L Y R ++ ++ EN+ + +TFL +PA+ +H +YC V
Sbjct: 224 KGIIDANGENLINQQKKEGLGY-RGRILSLMNGENICLEGVTFLQSPAWGVHFIYCMGVT 282
Query: 213 IQNISVHAP--PES--PYTV----GIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIA 264
I+++ ++ PE+ Y + G+ DSS ++ + + I+ D +S+KSG D G
Sbjct: 283 IKDVYINTRFDPETGRKYKIHNGDGLTIDSSKDIVVYNTTISSQDDNVSIKSGRDNDGRR 342
Query: 265 YGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGG 324
+ T +V + + G V GSEM+G + NV V ++ + + GRGG
Sbjct: 343 VAKSTDNVKLFDC--KFLGGFGVVVGSEMAGNVRNVLVNNCFYENTACVSQLKAPWGRGG 400
Query: 325 YIRQI----VISDAELYNINVAF-GACGNCGSHPDDDFDPDALPAIDQI--TFKDIIGTN 377
I I ++ +++ N+ F GA + ++ D +D+ T +D N
Sbjct: 401 VIENITFKNIVHTDSIHHDNMWFRGAICIDQYYGIENPDYTVRKEVDENMPTIRDAWYEN 460
Query: 378 ITIAGNF------TGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFP 426
ITI+ + G E NI N+ + G Y IH + P
Sbjct: 461 ITISKKYGFGMYLCGRPENYVKNIYFRNVEIHSENGIYGR-HLDGIHLKQTKIIP 514
>gi|150388731|ref|YP_001318780.1| glycoside hydrolase [Alkaliphilus metalliredigens QYMF]
gi|149948593|gb|ABR47121.1| glycoside hydrolase, family 28 [Alkaliphilus metalliredigens QYMF]
Length = 519
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 179/388 (46%), Gaps = 32/388 (8%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++++ +FGA G G+ +T + Q AI ++ +P G +LT L S++TL
Sbjct: 83 TLNVKDFGATGTGEKHDTASLQAAIMSCPP-----SGRVLIPEGTYLTAPLYLKSNITLE 137
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIEL---------PGRRYKSLINGYMLRDVVVT 150
++KGA +LGS + ++ G + P + SL+ G + +V +
Sbjct: 138 IQKGAKLLGSNVREDYPILPGTTKTTDGKDEFYLGSWEGDPMDCFASLLTGIGVNNVKII 197
Query: 151 GDNGTIDGQGSV--WWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
G G IDG S WW + + + RP L+ + ++++ +T N+P++ IHP++
Sbjct: 198 G-KGIIDGNASFDNWWKDAKKKRVAW-RPRLIFIKNCRDILIEEVTVQNSPSWTIHPMFS 255
Query: 209 SNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRP 268
N+ + N+ V P +SP T GI P+S NV I ++G D I++KSG G
Sbjct: 256 QNLQLINLKVINPKDSPNTDGINPESCQNVKIIGVDFSVGDDCIAIKSGKLYLGQRLKIA 315
Query: 269 TTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYI 326
+ D+ IR ++ G + GSEM+GG+ NV + ++ GI +T +GRG G I
Sbjct: 316 SQDIMIRNCHMKFGHG-GIVIGSEMAGGVKNVSAIRCIFEETDRGIRIKTRRGRGKDGVI 374
Query: 327 RQIVISDAELYNINVAFGACGNCGSHPDDDFD----------PDALPAIDQITFKDIIGT 376
I + + + F PD + + P + + K++I
Sbjct: 375 NGINAENIVMKKVLTPFVINTFYFCDPDGKTEYVWSKEKLPVDERTPVVKNVYLKNMICE 434
Query: 377 NITIAGNFT-GIQEAPFANICLSNISLS 403
+ +A F G+ E NI L +I +S
Sbjct: 435 DCEVAAGFIYGLPECKIENIILEDIKVS 462
>gi|424911961|ref|ZP_18335338.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392847992|gb|EJB00515.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 517
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 168/376 (44%), Gaps = 36/376 (9%)
Query: 51 DGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQ 110
+G N A + A+ + G L + +G W + L S++T L +GAV+
Sbjct: 101 EGARANAEALETAVAAVPH-----GGTLRLAAGLWTSFPVRLKSNMTFHLAEGAVLRAPS 155
Query: 111 NPSHWDVVDPLPSYGRGIE----LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WW 164
+ W ++ G + LP + + + ++++ G G +DG G WW
Sbjct: 156 SRKAWPILPARDDAGHMLGSWEGLPDACFAAPVQAIGTDNLIIEG-RGVLDGSGDRGDWW 214
Query: 165 DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES 224
W RP + +S + + T NA ++ IHP C ++ ++++AP +S
Sbjct: 215 SWPKETRDGARRPRGLHLVSCRKIQLLGFTIKNAASWTIHPQGCEDLIAAGLTINAPHDS 274
Query: 225 PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGW-----DEYGIAYGRPTTDVHIRRVLL 279
P T G P+S NV I ++G D I++K+G ++ +A T + +R L+
Sbjct: 275 PNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAE---TRGIRVRHCLM 331
Query: 280 QSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI 339
+ G V GSEMSGG+ +V VE + + G+ +T +GRGG + I + L +
Sbjct: 332 ERGHGGLV-IGSEMSGGVHDVSVEDCDMVGTDRGLRLKTRRGRGGIVSNIAMRRVLLDGV 390
Query: 340 NVAFGACGNCGSHPDDDFDPDAL------------PAIDQITFKDIIGTNIT-IAGNFTG 386
A A N H D D + + P ID I +D+ N+ AG F G
Sbjct: 391 QTALSA--NAHYHCDADGHDERVQSRQPAPIDKGTPFIDGIIVEDVEIRNLAHAAGVFLG 448
Query: 387 IQEAPFANICLSNISL 402
+ EAP N+ + N+++
Sbjct: 449 LPEAPIRNVAIRNLTI 464
>gi|431798433|ref|YP_007225337.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789198|gb|AGA79327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 477
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 192/421 (45%), Gaps = 66/421 (15%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
I++FGAVGDG T + A ++AI ++ A+ GG ++ VP G + TG L S++ L LEK
Sbjct: 60 ISDFGAVGDGSTDASQAIKSAI---QACAEAGGGKVVVPPGDYPTGPIYLESNVNLHLEK 116
Query: 103 GAVILGSQNPSHWDVVDPLP-SYGR--GIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
A ++ S +P D LP Y R G+EL Y L+ + ++ +TG+ G +DGQ
Sbjct: 117 DARLMFSTDPK-----DYLPLVYTRWEGVEL--MNYSPLVYAFEEENIAITGE-GILDGQ 168
Query: 160 GSV--WWDWFSSQSLNYS------------------------------------RPHLVE 181
+ WW W Y+ RP V+
Sbjct: 169 ANETNWWPWKGKTQYGYTEGDPQQEDADKRHALFQMAEDGVPVEERKFGEGFYLRPQFVQ 228
Query: 182 FISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIE 241
+NV+V + +N+P + ++PV C NV I+ ++V + P + G P+SS NV I+
Sbjct: 229 PYRCKNVLVEGVKIVNSPMWILNPVLCENVTIEGVTVES--HGPNSDGCDPESSKNVLIK 286
Query: 242 DCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQ 301
DC G D I++KSG + G P+ ++ I+ + G V GSE+SGG+ NV
Sbjct: 287 DCYFNTGDDCIAIKSGRNADGRRINVPSENIIIQNCKMADGHG-GVVIGSEISGGVRNVF 345
Query: 302 VEKIHLYDSL--NGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP 359
E + + +T+ RGG +I D L NI+V A + +
Sbjct: 346 AENCEMNSPHLDRALRIKTSSMRGG-----IIEDIYLRNIDVGQIAQQVVRVNMFYEDSG 400
Query: 360 DALPAIDQITFKDIIGTNITIAGN-FTGIQEAPFANICLSNISLSINPGSYNSWECSNIH 418
+P + I +++ N G G + +P NI L N+++ + ++ SN+
Sbjct: 401 AYVPTVRNIHVENMTVENGGKVGVLLEGYENSPVENITLENVNIK---NAEEAYTFSNVK 457
Query: 419 G 419
G
Sbjct: 458 G 458
>gi|269957316|ref|YP_003327105.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
gi|269305997|gb|ACZ31547.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
Length = 459
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 167/360 (46%), Gaps = 20/360 (5%)
Query: 58 LAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDV 117
L ++ + A +GG ++ V G TGS L SH+ L +E GAV+ +P+ +
Sbjct: 24 LVTESLQARIDEAAARGGGRVTVGPGVHRTGSLRLRSHVELHVEAGAVLQFVPDPALYP- 82
Query: 118 VDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRP 177
P R P ++ + + V +TGD G WW+ F + +L + RP
Sbjct: 83 ----PVEARWEGAPATIHQPCLYAHDAEHVAITGDGVIDG-GGGPWWEAFRAGTLAHPRP 137
Query: 178 HLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDN 237
LV +V + ++T ++PA+ +HP+ C +V ++++++ PP+SP T GI P+S N
Sbjct: 138 TLVGLHRCTHVRLRDVTLRSSPAWTVHPLLCDDVAVRDVTIVNPPDSPNTDGIDPESCRN 197
Query: 238 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 297
V I C I +G D I+LK+G + +V + L G V GSEMSGGI
Sbjct: 198 VRISGCHIDVGDDCIALKAGTEASPERVA--CENVVVTGCTLVHGHG-GVVLGSEMSGGI 254
Query: 298 SNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDF 357
NV V + GI + +GRGG + + +S+ + ++ + P D
Sbjct: 255 RNVVVADCVFQGTDRGIRLKARRGRGGVVEDVRVSNVVMDDVGCPLVLNQHYDRGPGGDS 314
Query: 358 ----DPDALPA------IDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSINP 406
D ALP +IT + N+ A F G+ E P A + L ++++S P
Sbjct: 315 PHVGDRGALPVDATTPLFRRITVAHVSARNVRAAAVFALGLAEQPVAELVLDDVAVSFAP 374
>gi|52081815|ref|YP_080606.1| glycoside hydrolase family protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319647732|ref|ZP_08001950.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|404490699|ref|YP_006714805.1| glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683814|ref|ZP_17658653.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
gi|52005026|gb|AAU24968.1| Glycoside Hydrolase Family 28 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52349704|gb|AAU42338.1| putative glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317390073|gb|EFV70882.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|383440588|gb|EID48363.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
Length = 436
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 155/325 (47%), Gaps = 46/325 (14%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
S +T FGA +GK +T A Q AI GG ++ VP G +L+G+ L S++ L
Sbjct: 22 RSFDVTSFGADENGKNDSTEAIQKAI---DQAHQAGGGRVTVPEGVFLSGALRLKSNVDL 78
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ KGAVI SQNP D + + + G+EL Y LI Y ++ +TG GT+DG
Sbjct: 79 HIAKGAVIKFSQNPE--DYLPVVLTRFEGVEL--YNYSPLIYAYEADNIAITG-KGTLDG 133
Query: 159 QG--SVWWDWFS------SQSLN-----------------------YSRPHLVEFISSEN 187
QG WW W SQ + Y RP+ ++ ++
Sbjct: 134 QGDDEHWWPWKRGTNGQPSQEKDRNALFEMAERGIPVTERQFGKGHYLRPNFIQPYRCKH 193
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAM 247
+++ +T LN+P + +HPV C NV + I V P T G+ P+S NV I+ C
Sbjct: 194 ILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKGCHFDN 251
Query: 248 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 307
G D I++KSG + G P+ ++ I ++ G V GSE+SGG+ NV E +L
Sbjct: 252 GDDCIAVKSGRNADGRRINIPSENIVIEHNEMKDGHG-GVTIGSEISGGVKNVIAEG-NL 309
Query: 308 YDSLN---GIEFRTTKGRGGYIRQI 329
DS N + +T RGG + I
Sbjct: 310 MDSPNLDRALRIKTNSVRGGVLENI 334
>gi|160936546|ref|ZP_02083913.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
gi|158440337|gb|EDP18082.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
Length = 522
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 182/398 (45%), Gaps = 36/398 (9%)
Query: 33 TLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNL 92
T D ++ + +FGA GDG +TL Q AI A +++ +P+G + S L
Sbjct: 74 TTDSEFVTLDVRDFGAKGDGIQDDTLFIQAAIM-----ACPEKSRVLIPAGTYRIVSLFL 128
Query: 93 TSHLTLFLEKGAVILGSQNPSHWDVVDPL-PSYGRGIEL--------PGRRYKSLINGYM 143
+ + L +GAV+ + + + V + SY E P + +ING
Sbjct: 129 KDDVNIELAEGAVLSAYTDRTRFPVFQGMIQSYDEQGEYNLGTWEGNPLPMFTGIINGVN 188
Query: 144 LRDVVVTGDNGTIDGQ-GSVWWDWFSSQSLNYS--RPHLVEFISSENVVVSNLTFLNAPA 200
++ V+ G GTIDG G +W+ + ++ RP ++ V V +T N+P+
Sbjct: 189 VKGAVIYG-QGTIDGNAGDSEGNWWHEPKVIHTACRPRMIFLERCRQVTVQGITVRNSPS 247
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+NIHP + ++ ++ V P +SP T G+ P+S +V I ++G D I++KSG
Sbjct: 248 WNIHPYFSDHLRFFDLKVLNPKDSPNTDGLDPESCQDVEIAGVYFSLGDDCIAVKSGKIY 307
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G Y RP+ D+ IRR ++ G SV GSEM+GG+ N+ V+ + G+ +T +
Sbjct: 308 MGSTYKRPSKDISIRRCCMRDGHG-SVTIGSEMAGGVKNLTVKDCMFLHTDRGLRIKTRR 366
Query: 321 GRG--GYIRQIVISDAELYNINVAFGACGNCGSHPDDD------------FDPDALPAID 366
GRG + IV + ++ F NC D D + P I
Sbjct: 367 GRGKDAVVDGIVFEHIRMDHVMTPFVI--NCFYFCDPDGHSEYVRTKEALLVDERTPLIK 424
Query: 367 QITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLS 403
+ FKDI N +A + G+ E + + ++ ++
Sbjct: 425 SLCFKDIEAENCHVAAAYMYGLPEQRIERVEMDHVRVT 462
>gi|375148498|ref|YP_005010939.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062544|gb|AEW01536.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 547
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 170/363 (46%), Gaps = 65/363 (17%)
Query: 32 PTLDP---RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTG 88
P + P + S IT++GAV DG+ LNT A AI + KGG + VP+G W TG
Sbjct: 26 PVIQPTSFKKDSTWITKYGAVADGQMLNTQAINAAI---DACNKKGGGVVVVPAGLWATG 82
Query: 89 SFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVV 148
L S++ L L+KGAV+ +++ + + +V+ G +P R +S ++ ++
Sbjct: 83 PITLKSNVNLHLKKGAVLQFTKDFNQYQLVE-----GNWEGIPQMRNQSPVSATNATNIA 137
Query: 149 VTGDNGTIDGQGSVW------------WD---------------WFSSQSL--------- 172
+TG G IDG G W W W+ S+
Sbjct: 138 ITG-FGVIDGGGEAWRQVRKEKLTESQWKEWVAGGGVVSEDGKSWYPSEQWLKAAKMKNP 196
Query: 173 ----------------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
++ RP+L+ + V++ +TF N+ A+ +HP+ ++ ++N+
Sbjct: 197 GEFTPDKTPEFYKSIKDFLRPNLIVLTKCKKVLLEGVTFQNSAAWCLHPLMSEDLTVRNV 256
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+V P + GI +S + V IE+ +G D + +KSG DE G G PT +V IR
Sbjct: 257 TVKNPWFAQNGDGIDVESCNRVLIENSSFDVGDDGLCMKSGRDEAGRKRGMPTENVIIRD 316
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ + G V GSEMSGG N+ V + G+ F+TT+GRGG + I +D ++
Sbjct: 317 CKVYHAHGGFV-IGSEMSGGARNIWVNNCTFIGTDIGLRFKTTRGRGGIVENIYCNDIQM 375
Query: 337 YNI 339
+I
Sbjct: 376 IDI 378
>gi|182416092|ref|YP_001821158.1| glycoside hydrolase [Opitutus terrae PB90-1]
gi|177843306|gb|ACB77558.1| glycoside hydrolase family 28 [Opitutus terrae PB90-1]
Length = 543
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 174/402 (43%), Gaps = 50/402 (12%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
+PT R I + GAV GKT NT AF AI GG ++ VP+G+WLTG
Sbjct: 46 RPTFPARVED--IRDHGAVPGGKTKNTAAFAQAIAACAE---AGGGRVLVPAGRWLTGPI 100
Query: 91 NLTSHLTLFLEKGA-VILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
+L S++ L L + A VI + + VV L G GIEL Y I +V +
Sbjct: 101 HLRSNIELHLAQDAEVIFSDRFEDYLPVV--LVRVG-GIEL--YNYSPFIYARDCTNVAI 155
Query: 150 TGDNGTIDGQGSVWWDWFSSQSLNY---------------------SRPHLVEFISSENV 188
TG G ++G WW W + ++ RP+ V F + NV
Sbjct: 156 TGP-GRLNGNSQRWWAWKTKETKRIFRLAPDGVPVEQRIFGTPEAAIRPNFVVFFNCRNV 214
Query: 189 VVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMG 248
++ T P + IHPVY N+ I+ VH E P GI PDS NV IE C+ G
Sbjct: 215 LMEGFTIGGGPNWTIHPVYSENIIIRR--VHVLTEGPNNDGIDPDSCRNVLIEHCVFDTG 272
Query: 249 HDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY 308
D + LKSG++E G RPT +V +R G V GSEMSG + NV +
Sbjct: 273 DDCVVLKSGYNEDGWRVARPTENVVMRWCSSARGHGGLVV-GSEMSGDVRNVYMHDCDFA 331
Query: 309 DSLNGIEFRTTKGRGGYIRQIVISD-------AELYNINVAFGACGNCGSHPDDDFDPDA 361
+ + ++ +GRGG + I + E+ +N+ +GA N +
Sbjct: 332 GTDRAVRIKSRRGRGGVVENIWAENLRVRDMQQEVVILNMDYGADRNQAFT-------EK 384
Query: 362 LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
P I + + A G+ ++P ++ ++++
Sbjct: 385 PPLFRNIHVRRVTADGAPAAIRIAGLADSPIEHVTFEDLTIQ 426
>gi|339022449|ref|ZP_08646391.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
gi|338750533|dbj|GAA09695.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
Length = 438
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 199/428 (46%), Gaps = 60/428 (14%)
Query: 46 FGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
+GA DG+T + A Q AI + ++ GG + + SG WL+G +L +H+TL L +G+
Sbjct: 17 YGARHDGRTNDGPAIQRAI---TACSEAGGGMVSLTSGTWLSGPLSLKNHVTLNLGQGST 73
Query: 106 ILGSQNPS--HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS-V 162
+LGS + HW + G+ + PG ++L++ ++DV +TG G IDG G+ V
Sbjct: 74 LLGSSDTRLFHWAFL------GKAAQ-PG---EALVSAIDVQDVAITG-QGHIDGNGAAV 122
Query: 163 WWDWF-------SSQSLNYS-------------RPHLVEFISSENVVVSNLTFLNAPAYN 202
WW +S L Y RP L+EF ++ +S +T N+P +
Sbjct: 123 WWPQAVRAHKTQTSGPLPYGPDYPGVPAANGLPRPWLIEFSHVQHGRISGVTATNSPMWT 182
Query: 203 IHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYG 262
+ S + I ++++ P S T GI SSD+V + IA G D I++KSG +
Sbjct: 183 VVVRESSQIKIDHLTIRNPASSRNTDGIDLVSSDHVTMSTLDIATGDDNIAIKSGLRQ-- 240
Query: 263 IAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGR 322
GR +D+ I + G ++ GSE++ G ++++ + ++L+G+ ++ + R
Sbjct: 241 --PGRAVSDISITQSRF--GEGHGLSIGSELANGAHHIRISDVSFQNTLSGLRIKSGRDR 296
Query: 323 GGYIRQIVISDAELYNINVAFGACGNCGSHPDDD------FDPDA-----LPAIDQITFK 371
GG I I + ++ P DP A P I +T
Sbjct: 297 GGDIGWISAEHVMMNHVRAPLSISDYYAGQPGGTQKTVSMTDPAAPVTSTTPHIHDVTIT 356
Query: 372 DIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHG-SSESVFP-EPC 429
D+ N AG G+ EAP + L NI LS G + S++ G +SES F +
Sbjct: 357 DLTAKNAETAGVVLGLPEAPIEGLTLRNIRLSARKG----LQFSHVSGRASESTFAVQTA 412
Query: 430 PELENSSS 437
P L+ S+
Sbjct: 413 PVLQCGSA 420
>gi|219814394|gb|ACL36472.1| pectinase [uncultured bacterium]
Length = 436
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 153/325 (47%), Gaps = 46/325 (14%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
S +T FGA G GK T A Q AI GG ++ VP G +L+G+ L S++ L
Sbjct: 22 RSFDVTAFGADGSGKKDATGAIQKAI---DQAHKAGGGRVAVPEGVFLSGALRLKSNVEL 78
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
L +GAVI SQNP D + + + G+EL Y LI Y ++ +TG GT+DG
Sbjct: 79 HLAQGAVIKFSQNPE--DYLPVVLTRFEGVEL--YNYSPLIYAYEAENIAITG-KGTLDG 133
Query: 159 QG--SVWWDWF------SSQSLN-----------------------YSRPHLVEFISSEN 187
QG WW W SSQ + Y RP+ ++ ++
Sbjct: 134 QGDDEHWWPWKRGTNGQSSQEKDRNALFEMAERGVPVTERQFGKGHYLRPNFIQPYRCKD 193
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAM 247
+++ + LN+P + +HPV C NV + I V P T G+ P+S NV I+ C
Sbjct: 194 ILIQGVPVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKGCHFDS 251
Query: 248 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 307
G D I++KSG + P+ ++ I ++ G V GSE+SGG+ NV E +L
Sbjct: 252 GDDCIAVKSGRNADARRINMPSENIVIEHNEMKDGHG-GVTIGSEISGGVKNVIAEG-NL 309
Query: 308 YDSLN---GIEFRTTKGRGGYIRQI 329
DS N + +T RGG + I
Sbjct: 310 MDSPNLDRALRIKTNSVRGGVLENI 334
>gi|254295110|ref|YP_003061133.1| glycoside hydrolase family protein [Hirschia baltica ATCC 49814]
gi|254043641|gb|ACT60436.1| glycoside hydrolase family 28 [Hirschia baltica ATCC 49814]
Length = 469
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 178/395 (45%), Gaps = 53/395 (13%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
+T+F A GDG NT AF+ AI + GG Q+ VP G +LTG+ L S++ L +
Sbjct: 57 LTDFDARGDGIFDNTAAFKAAIDACRK---AGGGQIRVPDGHYLTGAIQLHSNIELNVSA 113
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS- 161
GA ++ S +P + VV L Y G+E+ Y LI ++V +TG+ G +DGQ S
Sbjct: 114 GARLIFSTDPMDYPVV--LTRY-EGVEV--MNYSPLIYARDAKNVAITGE-GVLDGQASN 167
Query: 162 -VWWDWFSSQSL----------------------------------NYSRPHLVEFISSE 186
WW W ++ +Y RP VEF + E
Sbjct: 168 EHWWPWCGAERFGWREGVGHQTPDRQALFEMAESGIPVEQRRFGPGHYLRPSFVEFYNCE 227
Query: 187 NVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIA 246
NV+V ++ ++P +NIHPV NV ++ + V P G P+S D++ IE+C
Sbjct: 228 NVLVEDIHLKDSPFWNIHPVLSRNVIVRGVEVVG--HGPNNDGCNPESVDHMLIENCYFD 285
Query: 247 MGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIH 306
G D I++KSG + G P+ ++ IR +++ G V GSE+SG + NV E
Sbjct: 286 TGDDCIAIKSGRNADGRRVAVPSENILIRNCQMKAGHG-GVVIGSEISGDVFNVYAEGCA 344
Query: 307 LY--DSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPA 364
+ D + + RGG + I + + E+ + A C + ++ + P
Sbjct: 345 MDSPDLWYMLRIKNNAMRGGVVENIHLRNIEVGQVARAVMI---CDFNYEEGINGPFTPV 401
Query: 365 IDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
+ ++ + I + G +A NI L +
Sbjct: 402 LRNVSMQSIAVKKAVRVLDSQGFAKAEIENISLKD 436
>gi|315499125|ref|YP_004087929.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315417137|gb|ADU13778.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 512
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 180/397 (45%), Gaps = 39/397 (9%)
Query: 34 LDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLT 93
+DPR FGA GDG + +T A Q A+ A G + + +G++L+ L
Sbjct: 78 VDPR-------AFGAKGDGVSDDTAALQAALM-----ACPPGGLVRLEAGRYLSAPLFLK 125
Query: 94 SHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIE------LPGRR---YKSLINGYML 144
S + + L +GA ILG ++ + W V+ + G++ G + L N
Sbjct: 126 SDMAVELCEGAHILGHRDITKWPVLPGVLPDAEGVKHTCLGSWEGEADACHAGLFNLLFA 185
Query: 145 RDVVVTGDNGTIDGQG--SVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYN 202
++V + G G +D Q WW+ ++ + + RP L+ + E V++ +T N+P++
Sbjct: 186 QNVQIYG-RGVMDAQAGFDTWWERPKARFIGW-RPRLIFMVECEQVILQGMTLKNSPSWT 243
Query: 203 IHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYG 262
+HP++ + ++ + AP +SP T G+ P+SS ++ I A+G D I+LKSG
Sbjct: 244 VHPLFSRGLTFVDLRIEAPADSPNTDGLNPESSTDIVISGVDFAVGDDCIALKSGKISMA 303
Query: 263 IAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGR 322
RPT V I ++ G +V GSEM+ G+ ++ V+ ++ GI +T +GR
Sbjct: 304 RRSVRPTRRVRISNCRMKDGHG-AVVIGSEMACGVYDISVQTCLFINTDRGIRLKTRRGR 362
Query: 323 G--GYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP----------DALPAIDQITF 370
G IR + + + AF PD D + P+I I
Sbjct: 363 GREAVIRGLNCRHIRMEGVGSAFVINSFYWCDPDGKTDEVADRNPRPVDEGTPSIGDIRL 422
Query: 371 KDIIGTNITIAGNFT-GIQEAPFANICLSNISLSINP 406
I + AG + G+ E P + L +I L +P
Sbjct: 423 SHIDAIGVRHAGLYVLGLPEQPVDGLTLDHIRLRFDP 459
>gi|399029277|ref|ZP_10730250.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398072887|gb|EJL64081.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 563
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 189/427 (44%), Gaps = 73/427 (17%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
+ +++I +FGAV + L T A +AI ++ GG + +PSG W TG L S++
Sbjct: 55 KKDTLNIVDFGAVPNTGELCTKAINDAIM---KCSESGGGVVAIPSGLWTTGPIYLKSNV 111
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
L + GA IL + + + + +++ SY G ++ R +S I G L ++ +TG G
Sbjct: 112 NLHTQNGAYILFTSDLNQYKLIN---SYFEGNKVI--RCESPIMGVGLENIAITG-KGIF 165
Query: 157 DGQGSVW------------WD---------------WFSSQSL----------------- 172
DG GS W W W+ S+
Sbjct: 166 DGNGSKWRPVKIGKMSDEQWKNMVNSGGILSKDRKTWYPSEEALIGNEQKDKLPKVPSIE 225
Query: 173 ------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPY 226
RP +V ++ + +++ +TF N+PA+N++P+ C NV + N+++ P S
Sbjct: 226 NMKPYKQALRPVMVSLVNCKKLLLDGVTFQNSPAWNVNPLMCENVTLSNLNIRNPWYSQN 285
Query: 227 TVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSS 286
G+ +S + +C +G DAI +KSG D+ G G+PT I+ ++ G
Sbjct: 286 GDGLDLESCRIGTVTNCRFDVGDDAICIKSGKDQEGRERGKPTELFVIKDCVVYHGHGGF 345
Query: 287 VAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI---NVAF 343
V GSEMSGG+ N+ ++ + + G+ F++T+GRGG + I + D + +I + F
Sbjct: 346 V-IGSEMSGGVRNLFIKNLTFIGTDCGLRFKSTRGRGGLVENIWMEDIRMSDIPTEAIRF 404
Query: 344 GACGNCGSHPDDDFDPDAL----------PAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
S +D + + P + FK+I A GI E P
Sbjct: 405 EMYYFNKSGVEDPLTGEMIVEKVPVSETTPVFKNMYFKNIYVDGAKQALKIMGIPEMPVE 464
Query: 394 NICLSNI 400
NI N+
Sbjct: 465 NIQFKNM 471
>gi|325106411|ref|YP_004276065.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975259|gb|ADY54243.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 476
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 202/447 (45%), Gaps = 56/447 (12%)
Query: 3 MPVALLLLLALCSAILIN---GEVSDGQCD--DQPTLDPRPHS---VSITEFGAVGDGKT 54
M L+ L LC +++IN + ++ + D D+ P ++ ++GA GDGKT
Sbjct: 1 MKKTLIFKLFLCLSLVINYAFAQSNEIKFDWIDKVGAKKAPEGKGMFNVAKYGAKGDGKT 60
Query: 55 LNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSH 114
LNT Q AI A KGG + G++LTGS + + L ++KG ILGSQ+
Sbjct: 61 LNTNTIQKAI---DDCAKKGGGIVVFNPGEYLTGSVFVKKGVNLRIDKGVTILGSQDIKD 117
Query: 115 WDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNY 174
+ V+D + G +E P +LIN D +++G G I+ QG V+WD++ + Y
Sbjct: 118 YKVIDTRVA-GIEMEWPA----ALINVLDQEDAMISG-KGLINAQGKVFWDYYWNLRKEY 171
Query: 175 S-------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISV--H 219
RP + +S+NV + +L A + + VY S V + +++ +
Sbjct: 172 EPKGLRWIIDYDARRPRTILVSNSKNVTIKDLNIQQAGFWTVQVVYSSYVTVDGLTINNN 231
Query: 220 APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLL 279
P T G+ DSS + +++ I D +K+G D G+ RP V IR +
Sbjct: 232 VGGHGPSTDGVDIDSSSWILVQNTDIDCNDDNFCIKAGRDADGLRVNRPCEYVVIRDCVA 291
Query: 280 QSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI 339
+ G + GSE SGGI N+ I + N + ++ RGG++ +++ + + ++
Sbjct: 292 R-KGGGLLTLGSETSGGIRNIYASNIKGMATSNCLNIKSAVTRGGFVENVLLENVTMDSV 350
Query: 340 NVAFGACGNCG-----SHPDDDFDPDALP----AIDQIT---------FKDIIGTNITIA 381
N S +D +++P A+ Q FK+I NI I
Sbjct: 351 GTVLQVNMNWNPAYSYSELPKGYDYNSIPKHWKALLQKVEPKEKGIPIFKNIYMNNIHIK 410
Query: 382 G-----NFTGIQEAPFANICLSNISLS 403
G N G+ ++ N+ L N+S+
Sbjct: 411 GAKRAINVVGLPQSKVENVNLKNVSIE 437
>gi|392950252|ref|ZP_10315809.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434534|gb|EIW12501.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 438
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 185/409 (45%), Gaps = 57/409 (13%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+++++F GDGK L+T Q A+ + A+K L + G +LTG+ + S+ L
Sbjct: 9 LTLSQFTPHGDGKNLDTKIIQQAL----NEANKQQTGLTIGPGDYLTGALFVPSNSHLQF 64
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
E GA ++GS + + + +D + G+E+ R +++N DVV+ G G IDG G
Sbjct: 65 EAGARLIGSTDLADYPEIDTRVA---GVEM--RWPAAILNVIDGEDVVIEGP-GVIDGNG 118
Query: 161 SVWWD--W-----------FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAY 201
VWW+ W + +++L + RP V F +N +S+LT + + +
Sbjct: 119 PVWWERYWGTDQKGGQRKIYDAKNLRWIVDYEVKRPREVLFYRCKNCAISDLTLMRSGFW 178
Query: 202 NIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEY 261
N YC + + +++V P T GI DSS V + +C ++ G D I +KSG D
Sbjct: 179 NCQLTYCQQMEVSHLTV-KENNGPSTDGIDIDSSSYVRVHNCELSCGDDCIVVKSGRDGD 237
Query: 262 GIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKG 321
G+ +P + I ++ S G V GSE+S GIS+V + + ++ G +++
Sbjct: 238 GLRVNQPAAHIEIDHCIIHSGYG--VTLGSEVSAGISDVHIHDMIFENTDCGFRMKSSAD 295
Query: 322 RGGYIRQIVISDAELYNINVAFGACGNCGS---HPDDDFDPDALP-----------AIDQ 367
RGG I+ +V E++N+ F N + H PD P + +
Sbjct: 296 RGGVIKNVVAEHLEMHNVQFPFSWLMNWHTQYNHKTMAITPDMKPMWASVASQIPEKLQK 355
Query: 368 ITFKDIIGTNITI-----------AGNFTGIQEAPFANICLSNISLSIN 405
KDI+ ++T A + E P NI + + N
Sbjct: 356 TIVKDIVVRDVTATVSNDYAKETRAFDLKAFPEKPMQNITFEDCHIKAN 404
>gi|315500573|ref|YP_004089375.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315418585|gb|ADU15224.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 476
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 182/413 (44%), Gaps = 63/413 (15%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+V +FGA GDG T NT A Q AI + A L + G +LTGS L S + L
Sbjct: 42 TVRAEDFGARGDGVTRNTAALQRAIEAAAAQN----ATLVLAPGTYLTGSLFLKSGMALR 97
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
L+KG ++G Q + V+ + GIELP +L+N Y DV + G+ G IDG
Sbjct: 98 LDKGVTLVGEQTIESYPVMQTRIA---GIELPW--PSALLNVYDQTDVRIYGE-GKIDGN 151
Query: 160 GSVWWDWFSSQSLNY-------------SRPHLVEFISSENVVVSN------LTFLNAPA 200
G V+WD F S +Y RP L++ +S + + N L +
Sbjct: 152 GKVFWDRFQSIRADYEARGLRWAADYDAQRPRLIQIYNSSRIELGNGPMAEPLQLARSGF 211
Query: 201 YNIHPVYCSNVHIQNISVH--APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGW 258
+ + VY +V + I+V + P T G+ DSS + +E I DA+ LK+G
Sbjct: 212 WTVQIVYSHDVKVSGITVRNNIDGKGPSTDGVDIDSSHTILVEHADIDANDDALCLKAGR 271
Query: 259 DEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN-GIEFR 317
D G+ RPT +V IR ++++ + V FGSE SGGI NV+V + + + GI F+
Sbjct: 272 DADGLRVNRPTENVVIRNSTIRAAY-AGVTFGSETSGGIRNVRVHDLRVIGPVRYGILFK 330
Query: 318 TTKGRGGYIRQIVISDAELYNINVAFGACG---NCGSHPDDDF----------------- 357
+ RGG I ISD I+VA G N P +
Sbjct: 331 SAATRGGGASDIDISD-----IDVAQAETGIRINLNWFPAYSYAKIPEGLTAYPAYWATL 385
Query: 358 -----DPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSIN 405
LP + I + + + A + + P +NI + +++L +
Sbjct: 386 TAPVPRSKGLPQVHNIRIRRVTAKGLKTAVDLEAYADVPLSNIQIEDVTLEAD 438
>gi|325106104|ref|YP_004275758.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974952|gb|ADY53936.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 1277
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 203/437 (46%), Gaps = 51/437 (11%)
Query: 7 LLLLLALCSAILINGEVSDG--------QCDDQPTLDPRPHSVSITEFGAVGDGKTLNTL 58
L LL + AI I G G + PT R ++ I FGA +
Sbjct: 9 LFLLFIMLLAIPIAGFTQTGWDYVKEIEKNIKAPTFANRNYN--ILHFGAQKGAVKDSRP 66
Query: 59 AFQNAIFYLKSFADKGGAQLYVPSGKW-LTGSFNLTSHLTLFLEKGAVILGSQNPSHWDV 117
A AI +D+GG Q+ VP GK+ + G S++ L+L +GA ++ S + D
Sbjct: 67 AINTAI---TKCSDEGGGQVTVPPGKYFIKGPIIFKSNVNLYLSEGAELIFSHDEK--DY 121
Query: 118 VDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV-WWDWFSSQSLNYS- 175
+ + + G E+ Y LI Y + ++ +TG G ++GQGS +W Q + +
Sbjct: 122 LPAVLTRWEGTEVFN--YSPLIYAYQVENIAITG-KGILNGQGSKNIANWKPEQKKDQAL 178
Query: 176 ----------------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHI 213
RP +E ++ N+++ + ++A + IHP+ C+NV +
Sbjct: 179 IRKMGREGAPVYNRLFGEKHKLRPAFIEPLNCRNILIEGVRIIDATFWVIHPIGCNNVTV 238
Query: 214 QNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVH 273
+N+S+ + + + G P+S+ N +E+C G D I++KSG D+ G G+PT ++
Sbjct: 239 RNVSIDSF--NANSDGFDPESTTNALVENCHFRTGDDGIAIKSGRDQDGWRIGQPTENII 296
Query: 274 IRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD 333
+R +S + S V GSE+SGG+ NV +E I + + N I F++ RGGY+ I +
Sbjct: 297 VRNSTFESLA-SGVCIGSEISGGVRNVFIENIKIPKASNAIYFKSNLDRGGYMENTWIRN 355
Query: 334 AELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAG-NFTGIQEAPF 392
+ ++ A + S +++ + T ++I + +G G ++ P
Sbjct: 356 VNMDSVGTAIRFDPDYKSESKENY----ATRFNNFTIENINCAYASRSGIEVNGFKDMPI 411
Query: 393 ANICLSNISLSINPGSY 409
N+ L N+ ++ P S+
Sbjct: 412 TNVALKNVRITKTPVSH 428
>gi|408789181|ref|ZP_11200887.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
gi|408485004|gb|EKJ93352.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
Length = 519
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 160/352 (45%), Gaps = 31/352 (8%)
Query: 75 GAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIE----L 130
G L + +G W + L S +T L +GAV+ + W ++ G + L
Sbjct: 122 GGTLQLAAGFWTSFPIRLKSSMTFHLAEGAVLRAPASRKGWPILPACDDAGHMLGSWEGL 181
Query: 131 PGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WWDWFSSQSLNYSRPHLVEFISSENV 188
P + + ++ ++++ G G +DG G WW W RP + +S +
Sbjct: 182 PDACFAAPVHAIGTDNLIIEG-RGVLDGSGDRGDWWSWPKETRDGARRPRGLHLVSCRKI 240
Query: 189 VVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMG 248
+ T NA ++ IHP C ++ ++++AP +SP T G P+S NV I ++G
Sbjct: 241 QLLGFTIKNAASWTIHPQGCEDLIAAGLTINAPHDSPNTDGFNPESCRNVTISGVRFSVG 300
Query: 249 HDAISLKSGW-----DEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVE 303
D I++K+G ++ +A T + +R L++ G V GSEMSGG+ +V VE
Sbjct: 301 DDCIAVKAGKRSPDGEDDHLAE---TRGIRVRHCLMERGHGGLV-IGSEMSGGVHDVSVE 356
Query: 304 KIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDAL- 362
+ + G+ +T +GRGG + I + L + A A N H D D + +
Sbjct: 357 DCDMVGTDRGLRLKTRRGRGGIVSNIAMRRVLLDGVQTALSA--NAHYHCDADGHDERVQ 414
Query: 363 -----------PAIDQITFKDIIGTNIT-IAGNFTGIQEAPFANICLSNISL 402
P ID I +D+ N+ AG F G+ EAP N+ + N+++
Sbjct: 415 SRQPAPIDKGTPFIDGIIVEDVEIRNLAHAAGVFLGLPEAPIRNVAIRNLTI 466
>gi|237709360|ref|ZP_04539841.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
gi|229456745|gb|EEO62466.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
Length = 938
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 167/369 (45%), Gaps = 51/369 (13%)
Query: 74 GGAQLYVPSG-KWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPG 132
GG + + G +L G+ L S + L LEK A +L S D + + + G EL G
Sbjct: 552 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKAD--DFLPEVWTRWEGTELYG 609
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQGS---VWWDWFSSQSLNYSR------------- 176
+ +I ++ +TG GTID QG W N R
Sbjct: 610 --HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTERI 666
Query: 177 --------PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTV 228
P ++F+ ++V +T N+P + IHPVYC NV +++I++ + P
Sbjct: 667 FGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS--HYPNND 724
Query: 229 GIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 288
G P+S+ NV IE+CI G DAI++K+G D G GRP+ ++ IR L QS + +
Sbjct: 725 GCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSEC-NGLC 783
Query: 289 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA------ 342
GSEMSGG+ N+ ++ I + N + F++ + RGGYIR I +S+ + A
Sbjct: 784 IGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGAVLRFET 843
Query: 343 --FGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 400
FG G + ++F + + A G + A G +E P NI + +
Sbjct: 844 NYFGFRGGRHTSQYENFRINNVKA----------GCSDHYAIFIDGYEEKPIKNIEIEHF 893
Query: 401 SLSINPGSY 409
+ P Y
Sbjct: 894 HVQKAPHPY 902
>gi|261406869|ref|YP_003243110.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283332|gb|ACX65303.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 475
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 186/443 (41%), Gaps = 67/443 (15%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+ +I +FGA+GDG + NT + +++ A +GG + +P+G WLTG L S + L
Sbjct: 28 TFNIADFGAIGDGLSDNT---EAFAAAIEACASQGGGTVLIPAGLWLTGPIRLQSGIRLH 84
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
+ GA++ S N + ++ R + R I G L +V +TG G DG
Sbjct: 85 ADAGALVHFSANRDDYPLIRTSYEGLRTV-----RCMPAIYGEDLENVAITG-TGIFDGS 138
Query: 160 GSVW------------WD--------------WFSSQSL--------------------- 172
G W W W + QSL
Sbjct: 139 GEAWRPVKRMKLTEGQWKQLIQSGGYEEGGVWWPTEQSLKSAALVKSLIAQNVQDPSAFE 198
Query: 173 ---NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVG 229
++ RP LV+ V+ TF N+PA+N+HP C +V I+N+S+ S G
Sbjct: 199 PARDHLRPTLVQLDRCRKVLFDGPTFRNSPAWNVHPWLCEHVTIRNVSIRNQWHSQNGDG 258
Query: 230 IVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAF 289
+ DS I D + +G DAI +KSG D G A PT V IR + G V
Sbjct: 259 LDLDSCRYANIYDSVFDVGDDAICIKSGKDADGRALAVPTEYVTIRNCQVFHGHGGFV-I 317
Query: 290 GSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNC 349
GSEMSG + N+ + + G+ F++T+GRGG + +I I + I +
Sbjct: 318 GSEMSGDVRNIAITDCVFIGTDAGLRFKSTRGRGGTVERIYIRGVLMKEIAKEAIIFSSY 377
Query: 350 GSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFT-----GIQEAPFANICLSNISLSI 404
S ++ DP A+ + F+D ++ T G T G+ E P NI + L+
Sbjct: 378 YSGKNNTDDPVAVTE-ETPVFRDFHISDTTCIGAHTALHIKGLPEMPIENIVFDRVQLTA 436
Query: 405 NPGSYNSWECSNIHGSSESVFPE 427
G+ + NI V PE
Sbjct: 437 RNGATCT-NARNITFRQTKVLPE 458
>gi|347537471|ref|YP_004844896.1| glycoside hydrolase family protein [Flavobacterium branchiophilum
FL-15]
gi|345530629|emb|CCB70659.1| Glycoside hydrolase precursor, family 28 [Flavobacterium
branchiophilum FL-15]
Length = 475
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 181/395 (45%), Gaps = 64/395 (16%)
Query: 5 VALLLLLALCSAILINGEVSDGQCDDQPTL--DPRP-----HSVSITEFGAVGDGKTLNT 57
+ ++LLL C++ L + + S+ D T+ D +P + ++ ++GA+ DG NT
Sbjct: 14 ILIMLLLISCASKLSSEKKSNSNWDQLNTIFKDVQPPVFPNKTFNVMDYGAISDGVFDNT 73
Query: 58 LAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDV 117
+ F I K+ ++KGG + +P G + TG +L +++ L L +GA I+ S NP + +
Sbjct: 74 VVFNKTI---KTCSEKGGGMVLIPKGTYFTGPIHLDNNVNLHLSEGAEIVFSTNPKDYPL 130
Query: 118 VDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS--VWWDWFSSQSL--- 172
V + G EL Y LI Y +V +TG G ++G+ S WW W
Sbjct: 131 VH---TSFEGTEL--MNYSPLIYAYNKTNVAITGK-GILNGKASNDNWWPWCGKSVYGWK 184
Query: 173 -----------------------------NYSRPHLVEFISSENVVVSNLTFLNAPAYNI 203
NY RP+ +EF +NV + + +NAP + I
Sbjct: 185 KGDPIQNVKQLMESAEKGMAVKDRVFGDGNYLRPNFIEFFECKNVHLKDFKIVNAPFWII 244
Query: 204 HPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGI 263
HP+ ++V + I H P G P+ S NV I +C G D I++K+G D G
Sbjct: 245 HPIKSNHVIVDGI--HIESHGPNNDGCDPEYSKNVIIRNCTFDTGDDCIAIKAGRDSDGR 302
Query: 264 AYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL---NGIEFRTTK 320
+ ++ I+ + G V GSE+S G+SNV VE + DS I ++
Sbjct: 303 RVAIKSENILIQNCKMFDGHG-GVTIGSEISAGVSNVFVENC-IMDSPELDRAIRIKSNT 360
Query: 321 GRGG-----YIRQIVISDAE--LYNINVAFGACGN 348
RGG Y+R I + + + + I++ +G GN
Sbjct: 361 RRGGIIENIYVRNITVGEVKESVLGIDLHYGVHGN 395
>gi|345513230|ref|ZP_08792752.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|345456240|gb|EEO47229.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 955
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 167/369 (45%), Gaps = 51/369 (13%)
Query: 74 GGAQLYVPSG-KWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPG 132
GG + + G +L G+ L S + L LEK A +L S D + + + G EL G
Sbjct: 569 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKAD--DFLPEVWTRWEGTELYG 626
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQGS---VWWDWFSSQSLNYSR------------- 176
+ +I ++ +TG GTID QG W N R
Sbjct: 627 --HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTERI 683
Query: 177 --------PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTV 228
P ++F+ ++V +T N+P + IHPVYC NV +++I++ + P
Sbjct: 684 FGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS--HYPNND 741
Query: 229 GIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 288
G P+S+ NV IE+CI G DAI++K+G D G GRP+ ++ IR L QS + +
Sbjct: 742 GCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSEC-NGLC 800
Query: 289 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA------ 342
GSEMSGG+ N+ ++ I + N + F++ + RGGYIR I +S+ + A
Sbjct: 801 IGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGAVLRFET 860
Query: 343 --FGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 400
FG G + ++F + + A G + A G +E P NI + +
Sbjct: 861 NYFGFQGGRHTSQYENFRINNVKA----------GCSDHYAIFIDGYEEKPIKNIEIEHF 910
Query: 401 SLSINPGSY 409
+ P Y
Sbjct: 911 HVQKAPHPY 919
>gi|212693830|ref|ZP_03301958.1| hypothetical protein BACDOR_03351 [Bacteroides dorei DSM 17855]
gi|212663719|gb|EEB24293.1| glycosyl hydrolase, family 43 [Bacteroides dorei DSM 17855]
Length = 957
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 167/369 (45%), Gaps = 51/369 (13%)
Query: 74 GGAQLYVPSG-KWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPG 132
GG + + G +L G+ L S + L LEK A +L S D + + + G EL G
Sbjct: 571 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKAD--DFLPEVWTRWEGTELYG 628
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQGS---VWWDWFSSQSLNYSR------------- 176
+ +I ++ +TG GTID QG W N R
Sbjct: 629 --HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTERI 685
Query: 177 --------PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTV 228
P ++F+ ++V +T N+P + IHPVYC NV +++I++ + P
Sbjct: 686 FGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS--HYPNND 743
Query: 229 GIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 288
G P+S+ NV IE+CI G DAI++K+G D G GRP+ ++ IR L QS + +
Sbjct: 744 GCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSEC-NGLC 802
Query: 289 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA------ 342
GSEMSGG+ N+ ++ I + N + F++ + RGGYIR I +S+ + A
Sbjct: 803 IGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGAVLRFET 862
Query: 343 --FGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 400
FG G + ++F + + A G + A G +E P NI + +
Sbjct: 863 NYFGFQGGRHTSQYENFRINNVKA----------GCSDHYAIFIDGYEEKPIKNIEIEHF 912
Query: 401 SLSINPGSY 409
+ P Y
Sbjct: 913 HVQKAPHPY 921
>gi|218134189|ref|ZP_03462993.1| hypothetical protein BACPEC_02079 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991564|gb|EEC57570.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 480
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 182/416 (43%), Gaps = 70/416 (16%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R I ++GAV G+ NT A AI ++ +++GG + VPSG WLTG + + +
Sbjct: 19 REAQYDIRDYGAVAGGRVSNTEAINAAI---RTCSEEGGGHVIVPSGLWLTGPVRILTGV 75
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSY-GRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
L +E GAV++ +N + ++ + Y G+ P R S I ++V +TG+ GT
Sbjct: 76 DLHVENGAVLMFDKNREEYPLI--ISDYEGQ----PRIRTVSPIMAADAQNVAITGE-GT 128
Query: 156 IDGQGSVW------------WD------------------WF------------------ 167
IDG G +W WD WF
Sbjct: 129 IDGNGELWRPLKKFKVTQRQWDKFVATSPDTVIPTNEGGMWFPTVTSYDGCMEGEPSLDD 188
Query: 168 ------SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
+ + ++ RP +V F+ + V++ +T N+PA+N+HP+ C+N+ + N + P
Sbjct: 189 PDALKKAERHYDFYRPVMVNFVRCDRVLIDGVTLQNSPAWNVHPLLCTNLTVSNAFIKNP 248
Query: 222 PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQS 281
+ GI +S V I + +G D I LKSG +E G PT V+I +
Sbjct: 249 YYAQNGDGIDVESCQYVEIYNTKFEVGDDGICLKSGKNEIGRRIKTPTKYVYIHDCTVMH 308
Query: 282 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-- 339
+ G V GSEMS G+S V V+ + GI F++ GRGG + I + + + I
Sbjct: 309 AHGGFVV-GSEMSRGMSEVYVQNCAFMGTDVGIRFKSQLGRGGIVENINLENINMTGIVG 367
Query: 340 -NVAFGACGNCGSHPDDDFDPDALPAIDQI-TFKDIIGTNITIAGNFTGIQEAPFA 393
+ F + + D D + + I F+++ NIT G T + A
Sbjct: 368 EAIIFTMGYSLYKLEHEKKDEDVFVSTEDIPVFRNVNMKNITCVGAKTAFKAEGIA 423
>gi|374316328|ref|YP_005062756.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
gi|359351972|gb|AEV29746.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
Length = 454
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 174/386 (45%), Gaps = 75/386 (19%)
Query: 75 GAQLYVPSGKWLTGSFNLTSH-LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
G L + G W TG ++ H + + + K A I+ +P G+ I + R
Sbjct: 33 GGCLSIGPGTWRTGPITISGHDIEVHIHKDAKIVF------------IPEEGKYIPVYSR 80
Query: 134 RYKSLINGYMLR---------DVVVTGDNGTIDGQGSVWWDW------------------ 166
IN Y + V + G+ GT+ G G WWD
Sbjct: 81 WEG--INCYCMHPCLYILNSHRVTIQGE-GTLYGSGHYWWDLSLGKRNLKMEPATETEKR 137
Query: 167 -------FSSQSL-------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVH 212
+ SQ + RP LV+ S ++++ +T ++P + +HP+Y N+
Sbjct: 138 FALLNPGYKSQGGGGGGRQSQFLRPPLVQVKDSSDILLEGITLEDSPFWTLHPLYSRNLV 197
Query: 213 IQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDV 272
+N+S+ P +P T GI DS +NV IE C+I +G D I+LKSG GI GRPT DV
Sbjct: 198 FKNLSIKNPKNAPNTDGIDLDSCENVTIEGCVIDVGDDGIALKSGSGPDGILTGRPTKDV 257
Query: 273 HIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQI--- 329
I + ++++ G +V GSE + GI NV+V + GI +T +GRGG I +
Sbjct: 258 RIFQCTVRNAHGGAV-IGSETAAGIHNVEVSNCLFDGTDRGIRIKTRRGRGGKISHLSFL 316
Query: 330 ---VISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQI-TFKDIIGTNITIAGNFT 385
++ + IN+ + CGS ++DF + LP + + DI T+ G +
Sbjct: 317 GLKMVKNLCPLTINLYY----RCGSFSNEDFSLEKLPVCPETPSVSDIRITDCEAVGCLS 372
Query: 386 ------GIQEAPFANICLSNISLSIN 405
G+ E+P +C+ + + S++
Sbjct: 373 SIAFIVGLPESPITGLCIEDCTFSLD 398
>gi|423242205|ref|ZP_17223315.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
gi|392639949|gb|EIY33757.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
Length = 955
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 167/369 (45%), Gaps = 51/369 (13%)
Query: 74 GGAQLYVPSG-KWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPG 132
GG + + G +L G+ L S + L LEK A +L S D + + + G EL G
Sbjct: 569 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKAD--DFLPEVWTRWEGTELYG 626
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQGS---VWWDWFSSQSLNYSR------------- 176
+ +I ++ +TG GTID QG W N R
Sbjct: 627 --HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTERI 683
Query: 177 --------PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTV 228
P ++F+ ++V +T N+P + IHPVYC NV +++I++ + P
Sbjct: 684 FGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS--HYPNND 741
Query: 229 GIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 288
G P+S+ NV IE+CI G DAI++K+G D G GRP+ ++ IR L QS + +
Sbjct: 742 GCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSEC-NGLC 800
Query: 289 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA------ 342
GSEMSGG+ N+ ++ I + N + F++ + RGGYIR I +S+ + A
Sbjct: 801 IGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGAVLRFET 860
Query: 343 --FGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 400
FG G + ++F + + A G + A G +E P NI + +
Sbjct: 861 NYFGFRGGRHTSQYENFRINNVKA----------GCSDHYAIFIDGYEEKPIKNIEIEHF 910
Query: 401 SLSINPGSY 409
+ P Y
Sbjct: 911 HVQKAPHPY 919
>gi|423232721|ref|ZP_17219121.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|423247413|ref|ZP_17228463.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
gi|392623160|gb|EIY17265.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|392632553|gb|EIY26512.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
Length = 955
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 167/369 (45%), Gaps = 51/369 (13%)
Query: 74 GGAQLYVPSG-KWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPG 132
GG + + G +L G+ L S + L LEK A +L S D + + + G EL G
Sbjct: 569 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKAD--DFLPEVWTRWEGTELYG 626
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQGS---VWWDWFSSQSLNYSR------------- 176
+ +I ++ +TG GTID QG W N R
Sbjct: 627 --HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTERI 683
Query: 177 --------PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTV 228
P ++F+ ++V +T N+P + IHPVYC NV +++I++ + P
Sbjct: 684 FGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS--HYPNND 741
Query: 229 GIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 288
G P+S+ NV IE+CI G DAI++K+G D G GRP+ ++ IR L QS + +
Sbjct: 742 GCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSEC-NGLC 800
Query: 289 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA------ 342
GSEMSGG+ N+ ++ I + N + F++ + RGGYIR I +S+ + A
Sbjct: 801 IGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGAVLRFET 860
Query: 343 --FGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 400
FG G + ++F + + A G + A G +E P NI + +
Sbjct: 861 NYFGFRGGRHTSQYENFRINNVKA----------GCSDHYAIFIDGYEEKPIKNIEIEHF 910
Query: 401 SLSINPGSY 409
+ P Y
Sbjct: 911 HVQKAPHPY 919
>gi|265755035|ref|ZP_06089949.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
gi|263234646|gb|EEZ20225.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
Length = 955
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 167/369 (45%), Gaps = 51/369 (13%)
Query: 74 GGAQLYVPSG-KWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPG 132
GG + + G +L G+ L S + L LEK A +L S D + + + G EL G
Sbjct: 569 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKAD--DFLPEVWTRWEGTELYG 626
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQGS---VWWDWFSSQSLNYSR------------- 176
+ +I ++ +TG GTID QG W N R
Sbjct: 627 --HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTERI 683
Query: 177 --------PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTV 228
P ++F+ ++V +T N+P + IHPVYC NV +++I++ + P
Sbjct: 684 FGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS--HYPNND 741
Query: 229 GIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 288
G P+S+ NV IE+CI G DAI++K+G D G GRP+ ++ IR L QS + +
Sbjct: 742 GCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSEC-NGLC 800
Query: 289 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA------ 342
GSEMSGG+ N+ ++ I + N + F++ + RGGYIR I +S+ + A
Sbjct: 801 IGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGAVLRFET 860
Query: 343 --FGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 400
FG G + ++F + + A G + A G +E P NI + +
Sbjct: 861 NYFGFRGGRHTSQYENFRINNVKA----------GCSDHYAIFIDGYEEKPIKNIEIEHF 910
Query: 401 SLSINPGSY 409
+ P Y
Sbjct: 911 HVQKAPHPY 919
>gi|266624154|ref|ZP_06117089.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864021|gb|EFC96319.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 509
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 174/371 (46%), Gaps = 57/371 (15%)
Query: 46 FGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
+ AVGDGKTLNT Q AI D+ +Y+P G +LTG+ L S + L+LE+GAV
Sbjct: 96 YHAVGDGKTLNTAVIQRAI---DDCMDE--EAVYLPKGVFLTGALRLHSDMELYLEEGAV 150
Query: 106 ILGSQNPSHWDVVDPLP---SYGRGIELPGRRYKSLIN--------GYMLRDVVVTGDNG 154
+ G+ V D LP S GIE Y S++N Y R+VV+ G
Sbjct: 151 LQGTDQ-----VEDYLPRIWSRFEGIEQEC--YSSVLNLGSLEHQGDYNCRNVVIRGKGT 203
Query: 155 TIDGQGSVWWDWFSSQSLNYS-----------------------RPHLVEFISSENVVVS 191
G S+ +S++ + RP L+ + +N+ +S
Sbjct: 204 IASGGRSLAEKVIASETEHLKDYLLSLGEQIRECEKPETIPGRVRPRLINMSNCQNITMS 263
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT-VGIVPDSSDNVCIEDCIIAMGHD 250
L + ++N+H +Y + N + ++ E + G PDSS N I C G D
Sbjct: 264 GLKLKDGASWNVHMIYSDGIVTNNCTFYS--EGIWNGDGWDPDSSTNCTIFGCTFNTGDD 321
Query: 251 AISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
+I++KSG + G RP+ HIR + + G + GSEMSGGI++VQ+ + S
Sbjct: 322 SIAIKSGKNPEGNEISRPSE--HIRIFDCKCAMGRGITIGSEMSGGINDVQIWDCDISSS 379
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITF 370
+GIE + TK RGGY++ + + D+ I F + G + DD P ++ F
Sbjct: 380 RHGIEIKGTKKRGGYVKNVKVRDSRTARI--LFHSVG----YNDDGAGAPKPPVFEKCIF 433
Query: 371 KDIIGTNITIA 381
++I T ++++
Sbjct: 434 ENIDVTGMSLS 444
>gi|315497213|ref|YP_004086017.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315415225|gb|ADU11866.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 466
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 159/353 (45%), Gaps = 53/353 (15%)
Query: 30 DQPTLD----PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW 85
D P+L R IT+FGA D + T A AI G + VP G W
Sbjct: 40 DMPSLRVPDFSRAQRFPITDFGASTDDQAATTAAIAKAIDAAHR---AGSGNVIVPQGIW 96
Query: 86 LTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLR 145
TG NL SH+ L L KGA +L S+ P D + P+ + GIE Y L+ +
Sbjct: 97 PTGKINLKSHVNLHLSKGATLLFSEKPE--DYLPPVQTSWEGIECFN--YSPLVYAFDCE 152
Query: 146 DVVVTGDNGTIDGQGSVWWDWFSS---------------------------QSLNYSRPH 178
+V ++G+ G + + VW W+ + N+ RPH
Sbjct: 153 NVGLSGE-GKLKAKLDVWQVWYKRPKPHMDALVRLYDLAYKGVPVEARQMVEGENHLRPH 211
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
V+F +V++ +++ ++P + IHP+ C +V I+ + V A + G+ P+ S NV
Sbjct: 212 FVQFNRCRHVLIEDISIEDSPFWTIHPLLCRDVVIRRVKVRAHGHN--NDGVDPEMSQNV 269
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
IEDC+ G DA+S+KSG D PT +V +R +++ +A GSE+SGGI
Sbjct: 270 LIEDCVFDQGDDAVSVKSGRDMDAWRLNTPTKNVVMRNCRIKNGH-QLMAVGSELSGGIE 328
Query: 299 NVQVEKIHLYDSLNG-----------IEFRTTKGRGGYIRQIVISDAELYNIN 340
N+ V+ H G + +T + RGGY++ I + + I
Sbjct: 329 NIFVDNCHFVGDGKGDDGWAVPINNLLYVKTNERRGGYVKNIHMRNVSATKIQ 381
>gi|251790610|ref|YP_003005331.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247539231|gb|ACT07852.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 467
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 176/409 (43%), Gaps = 63/409 (15%)
Query: 43 ITEFGAVGDGK--TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+T +GA G LNT +FQ AI A GG + VP+G +L L S++ L L
Sbjct: 45 VTRYGAEGHRLQIALNTSSFQKAI---DECAAAGGGTVLVPAGNYLVEPLFLKSNVRLHL 101
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM-------LRDVVVTGDN 153
EK A ++ S S + D RY NG++ ++V +TG+
Sbjct: 102 EKHATLVASTGESAYRATDST------------RYAQAENGWLPFISIADAQNVAITGE- 148
Query: 154 GTIDGQGSVWWDWF------SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
GTIDGQG+VWW+ + + + RP L+ S V+V +T N+P++++ Y
Sbjct: 149 GTIDGQGAVWWERWREAIRATGKKGGTDRPRLIYITRSSQVLVDGVTLTNSPSFHVVMRY 208
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
+V + S+ AP +P T I P S N+ I + +I D I++K+ + G
Sbjct: 209 ARDVTVNGTSIIAPWHAPNTDAIDPIDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPDG- 267
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
+V+I +L+ G S+ GSE SGG++NV VE S+ GI ++ +G+GG ++
Sbjct: 268 VVDNVYIANNVLKQGRGISI--GSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVK 325
Query: 328 QIVISDAELYNINVAFGACG----------------NCG------------SHPDDDFDP 359
+ + N+ V G G + P FD
Sbjct: 326 NVTYRHTRMVNVEVPLVFSGYYQAAPIVQAEVDKLLQAGGFTLGEQIYPPDTEPAQPFDK 385
Query: 360 DALPAIDQITFKDIIGTNIT-IAGNFTGIQEAPFANICLSNISLSINPG 407
P IT D+ T + AG G+ EAP + + + G
Sbjct: 386 VKTPHFSNITIVDLESTGRSKAAGYIIGVPEAPLSGFHFEQVRIEAEKG 434
>gi|291459617|ref|ZP_06599007.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417895|gb|EFE91614.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 526
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 160/321 (49%), Gaps = 23/321 (7%)
Query: 38 PHSV--SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
P SV + FGA+GDGK +T Q AI K G + +P G++LT L S
Sbjct: 79 PESVLLDVRAFGALGDGKNDDTACIQAAI----EACPKDGT-VRIPKGRYLTRPLFLRSG 133
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLP--SYGR-GIEL------PGRRYKSLINGYMLRD 146
L+L+L++GAV+LG + H+ + + S G+ G L P Y SL+ G LR+
Sbjct: 134 LSLWLDRGAVLLGDPSREHYPRLPGMTERSDGKGGFNLGSWEGDPETSYASLLTGIELRN 193
Query: 147 VVVTGDNGTIDGQG--SVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIH 204
V + G+ GT+DG S WW+ ++ + RP + + + + N+P++ IH
Sbjct: 194 VDIFGE-GTVDGNADRSDWWEEHKTKRGAW-RPRTIFLCRCRCIRIQGVLVRNSPSWTIH 251
Query: 205 PVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIA 264
P Y + + N+++ PP+SP T G P+S ++V + C I++G D I++KSG
Sbjct: 252 PYYTDGISLYNVTIWNPPDSPNTDGFDPESCEDVLLLGCRISVGDDCIAIKSGKARMAGE 311
Query: 265 YGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGG 324
+ + + +R +L+ G ++ GSE + G+ V+ + G+ +T +GRG
Sbjct: 312 RRKASRNFALRNSILERGHG-ALTIGSEAAAGVYRVEASLCIFSGTDRGLRLKTRRGRGP 370
Query: 325 --YIRQIVISDAELYNINVAF 343
+ +I + N+ + F
Sbjct: 371 DCFYDEIYFHHIRMENVPMPF 391
>gi|288926468|ref|ZP_06420388.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288336759|gb|EFC75125.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 843
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 185/425 (43%), Gaps = 67/425 (15%)
Query: 9 LLLALCSAILINGEVSDGQCD---DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIF 65
+LL LC++ E Q + ++P + R ++ IT +GA N
Sbjct: 1 MLLPLCASARGWNETEYKQIEQSIERPVIANR--TILITAYGAKTSASAAQNQKAINRAI 58
Query: 66 YLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYG 125
+ S KGG + VP+G W TG+ L SH+ L +E+GA + P D+ + +
Sbjct: 59 AVASM--KGGGSVVVPNGTWNTGAITLKSHVNLVVEEGATLHFVFEP---DLYPLVRTAW 113
Query: 126 RGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS--VWWDWFSSQSLNYS-------- 175
G+E Y I Y D+ V+G GTIDG GS WW W + Y
Sbjct: 114 EGLEC--YNYSPCIYAYGATDIAVSG-KGTIDGGGSNDTWWAWNGNPRFGYKEGVTTESQ 170
Query: 176 -----------------------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
RP L+ F+ E +++ ++ +N+P + IHP+
Sbjct: 171 RLGSRAQLQKYAEDGVPVEKRKFGKGRGLRPQLINFMHCERILIRDVKMVNSPFWVIHPL 230
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
N+ + N+ + E P G P++ +NV I++C G D I++KSG + G +G
Sbjct: 231 LSKNITVDNVYIWN--EGPNGDGCDPEACENVLIQNCTFHTGDDCIAIKSGRNNDGRLWG 288
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS---LNGIEFRTTKGRG 323
+P+ ++ IR ++ G V GSE+SGG NV E ++ DS + +T RG
Sbjct: 289 KPSKNIIIRNCKMEDGHG-GVVIGSEISGGCENVYAEDCYM-DSPELERVLRIKTNNCRG 346
Query: 324 GYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP-DALPAIDQITFKDIIGTNITIAG 382
G I+ I + NV G C + D++P +A Q T +++ N+T
Sbjct: 347 GLIQNINMR-------NVKVGQCKEAVLKINLDYEPREACYRGFQPTVRNVNMENVTCGK 399
Query: 383 NFTGI 387
+ G+
Sbjct: 400 SEYGV 404
>gi|317505480|ref|ZP_07963398.1| polygalacturonase [Prevotella salivae DSM 15606]
gi|315663393|gb|EFV03142.1| polygalacturonase [Prevotella salivae DSM 15606]
Length = 494
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 179/400 (44%), Gaps = 57/400 (14%)
Query: 31 QPTLDPRPHS-VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGS 89
QPT+ P++ VS+T+FGAV DG TLNT AF+ AI L GG L VP+G +LTG
Sbjct: 59 QPTMPTIPNNQVSLTDFGAVPDGITLNTEAFRKAISKLTKL---GGGHLIVPAGIYLTGP 115
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVV---DPLPSYGRGIELPGRRYKSLI------- 139
+L ++ + LE+ A+IL S N + +P P GI R S+
Sbjct: 116 ISLKDNIDIHLERNALILFSPNKKDFLKATDNEPQPKVVSGITASKRTNISITGEGTIDG 175
Query: 140 NGYMLRDV--VVTGD---------NGTIDGQGSVWWDWFSSQSLNYS---------RPHL 179
NG R V V D GTI +G +W+ + N + R HL
Sbjct: 176 NGQWWRPVKRVKMSDVEWNQYKAMGGTITPKGDLWYPFNLKTQENIAPNASEQEKMRAHL 235
Query: 180 VEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVC 239
+ NV++ +T N+P ++I P C+NV + I+V P + GI + NV
Sbjct: 236 IRITECNNVLIQGVTIQNSPRFHIVPQRCNNVIVDGITVRCPWNAQNGDGIDVGNCSNVL 295
Query: 240 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 299
I + +G DAI +KSG E R +++I+ + G V GSE+ GG+ N
Sbjct: 296 IVNSTFDVGDDAICMKSG-AEKADQTNRSCVNINIQNNTVYHGHGGFV-IGSEVIGGMKN 353
Query: 300 VQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI-NVAF-----------GACG 347
+ V + G+ F++ GRGG I I++ + NI N A GA
Sbjct: 354 IYVNNNFFSGTDTGLRFKSAVGRGGKTEDIFINNCYMNNILNEAITFETTYWDNHVGATQ 413
Query: 348 NCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGI 387
D +F P+ F+DI TN+T G T I
Sbjct: 414 PQKPAKDAEFVPN---------FQDIHITNVTCRGAKTAI 444
>gi|375100955|ref|ZP_09747218.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661687|gb|EHR61565.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 462
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 179/374 (47%), Gaps = 54/374 (14%)
Query: 1 MKMPVALLLLLALC----SAILINGEVSDGQCD-----------DQPTLDPRPHSVSITE 45
M+MP L L+LAL + + S D D+P + R +V +T+
Sbjct: 1 MRMPRVLPLVLALSLAGSAGSAVAAPASTPSTDWHHAAEIVRSIDEPDIPAR--TVDVTD 58
Query: 46 FGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLT-GSFNLTSHLTLFLEKGA 104
+GAVGDG T A + A L GG ++ +P G W + G L SH+ L + GA
Sbjct: 59 YGAVGDGSTDARPAIEAA---LADMERAGGGRVVLPPGTWFSAGPIRLRSHVDLHVSSGA 115
Query: 105 VILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG---QGS 161
+ S++P+ D + +PS G E+ G Y L++ + + DV VTG G IDG G
Sbjct: 116 TLRFSEDPA--DYLPVVPSRWEGTEMFG--YSPLLHAHRVHDVAVTG-GGLIDGNAEDGF 170
Query: 162 VWWDWFS---SQSL------------------NYSRPHLVEFISSENVVVSNLTFLNAPA 200
W Q+L +Y RP +++F S +V+V +T ++AP
Sbjct: 171 AAWRELQGEDQQALRRMGKEGVPVEERVFGEGHYLRPSMLQFYESSDVLVEGVTIVDAPM 230
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDC-IIAMGHDAISLKSGWD 259
+ H +Y ++ +++++V P G+ DSS +V +E+ +G D + +KSG D
Sbjct: 231 WVNHFIYSDDITVRDVTVKT--HRPNNDGVAIDSSSDVLVENNDFQGIGDDCVVVKSGRD 288
Query: 260 EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTT 319
E G GRP+ ++ +R + + G A GSEMSGG++ V VE+ + + + +
Sbjct: 289 EDGRRVGRPSENIVVRGNRMSGTEG-GFAIGSEMSGGVNTVFVERNTMDTIGSALYIKAN 347
Query: 320 KGRGGYIRQIVISD 333
RGG + ++ I D
Sbjct: 348 LDRGGVVERVRIRD 361
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 121/233 (51%), Gaps = 24/233 (10%)
Query: 34 LDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLT 93
L+ R H +T+FGA+GDGKT NT AF+ AI L + A GG QL VP G WLTGSFNLT
Sbjct: 844 LNCRKHRAVLTDFGAIGDGKTSNTKAFREAITKLTTKAVDGGVQLIVPPGNWLTGSFNLT 903
Query: 94 SHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDN 153
SH TLF+++GA IL SQ+ S + ++ PLPSYG R+ SLI G L DVV+T D
Sbjct: 904 SHFTLFIQQGATILASQDESEYPMIPPLPSYGEA------RFTSLIYGSNLTDVVIT-DV 956
Query: 154 GTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNL--TFLNAPAYNIHPV----- 206
I+ Q ++ R V+ I + + + F +Y +HPV
Sbjct: 957 TLINTQSAI------RIKTAVGRGGYVKNIFARRFTMKTMKYVFWMTGSYKLHPVGGFDP 1010
Query: 207 ----YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLK 255
SN++ ++++ S GI D +C+ + IA+ D L+
Sbjct: 1011 KALPEISNINYRDMTAENVTISAKLEGIKNDPFTGLCMSNVTIALSPDPKKLQ 1063
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 285 SSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFG 344
+S+ +GS +++V + + L ++ + I +T GRGGY++ I + + F
Sbjct: 940 TSLIYGS----NLTDVVITDVTLINTQSAIRIKTAVGRGGYVKNIFARRFTMKTMKYVFW 995
Query: 345 ACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSI 404
G+ HP FDP ALP I I ++D+ N+TI+ GI+ PF +C+SN+++++
Sbjct: 996 MTGSYKLHPVGGFDPKALPEISNINYRDMTAENVTISAKLEGIKNDPFTGLCMSNVTIAL 1055
Query: 405 NPGSYN-SWECSNIHGSSESVFPEPCPEL 432
+P W C+++ G + V PEPC L
Sbjct: 1056 SPDPKKLQWNCTDVSGVTSRVKPEPCSLL 1084
>gi|281419687|ref|ZP_06250686.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281406216|gb|EFB36896.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 467
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 189/432 (43%), Gaps = 62/432 (14%)
Query: 31 QPTLDPRP-HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGS 89
QPTL P + VSI E+G GDG T+NT AF AI L GG L VP+G +LTG
Sbjct: 35 QPTLPSIPANHVSILEYGGNGDGLTMNTQAFAKAISKLNKM---GGGHLNVPAGIYLTGL 91
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVV 149
+L ++ L LEK A+I+ S++ + +D P IN +++ +
Sbjct: 92 ISLKDNIDLHLEKNAIIVLSEDKNDHFKIDKTTGKKESRATPA------INASKRKNISI 145
Query: 150 TGDNGTIDGQGSVWW-----------DWFSSQSL-------------------------- 172
TG+ GTIDG G WW +W Q++
Sbjct: 146 TGE-GTIDGNGE-WWRPVKRSKVSDVEWKEFQTMGGTLNEKGDIWYPFNLKHKPNVAENM 203
Query: 173 ---NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVG 229
+R H++ F S ENV+V +T LN+P ++I P C NV I I+V P +
Sbjct: 204 DEQEKNRTHMIRFTSCENVLVQGVTLLNSPKFHIIPTRCKNVIIDGITVKCPWNAQNGDA 263
Query: 230 IVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAF 289
I S +V I + +I G D I +K G P +++I+ + + G V
Sbjct: 264 IDISSCKDVLIVNNVIDAGDDGICMKGG-AGAAGVAAGPCENINIQDNTVYHAHGGFV-I 321
Query: 290 GSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNC 349
GSE SGG+ N+ V + G+ F++ RGG I I +Y ++ A
Sbjct: 322 GSEFSGGMKNIVVRNNTFQGTDTGLRFKSAVKRGGTSENIYID--HIYMTDIKDAAITFE 379
Query: 350 GSHPDDDF--DPDALPAIDQI--TFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSIN 405
++ D+ P + F+DI +NI + G TGI EA A + +I++ N
Sbjct: 380 TTYFDNHVGAQKQTTPVKQEFLPNFQDIHMSNIYVRGCETGI-EAHGAEGMVHDITIK-N 437
Query: 406 PGSYNSWECSNI 417
+ + E NI
Sbjct: 438 SNIFYTKEAKNI 449
>gi|268612424|pdb|3JUR|A Chain A, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612425|pdb|3JUR|B Chain B, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612426|pdb|3JUR|C Chain C, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612427|pdb|3JUR|D Chain D, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
Length = 448
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 177/405 (43%), Gaps = 67/405 (16%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V++ +FGA GDG+T + +F+ AI + + +GG +L VP G +LTG +L S++ L
Sbjct: 26 REVNLLDFGARGDGRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLKSNIEL 82
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ KG + + VV L + GIEL Y L+ +V +TG +G +DG
Sbjct: 83 HV-KGTIKFIPDPERYLPVV--LTRF-EGIELYN--YSPLVYALDCENVAITG-SGVLDG 135
Query: 159 QG--SVWWDWFSSQSL----------------------------------NYSRPHLVEF 182
WW W + +Y RP V+F
Sbjct: 136 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 195
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
NV+V + +N+P + IHPV NV I+NI + + P GI P+S + IE
Sbjct: 196 YRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEK 253
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR-RVLLQSSSGSSVAFGSEMSGGISNVQ 301
C G D++ +KSG D G G P+ + +R +++ +S + GSEMSGG+ NV
Sbjct: 254 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 313
Query: 302 VEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD-------AELYNINVAFGACGNCGSHPD 354
+ + +T RGGY+ I D E+ IN+ +
Sbjct: 314 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY----------- 362
Query: 355 DDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
D+ + + LP + + K++ T A G++ +I +S+
Sbjct: 363 DNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISD 407
>gi|386820345|ref|ZP_10107561.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386425451|gb|EIJ39281.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 514
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 192/426 (45%), Gaps = 60/426 (14%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
+ +FG +GDGKT+NT A Q AI A+ GG + G +L+GS + ++ + K
Sbjct: 85 VNDFGGIGDGKTINTEAIQKAI---DKCAENGGGTIAFKPGTYLSGSIFIKKNIHFKIGK 141
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
ILGSQ+ + + +D + GIE+ + +LIN +V++ G+ G IDGQG V
Sbjct: 142 NVTILGSQDINDYKEIDTRVA---GIEM--KWPAALINVSNQENVIIDGE-GLIDGQGKV 195
Query: 163 WWDWFSSQSLNY--------------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
+WD++ N RP + S+N+ + +L A + +H +Y
Sbjct: 196 FWDYYWDLRKNEYEPKGLRWIVDYDAKRPRTILISDSKNIALKDLNIQKAGFWTVHVLYS 255
Query: 209 SNVHI------QNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYG 262
+ + NI H P T GI DSS V I++C I D LK+G D G
Sbjct: 256 EKITVDGLIIKNNIGGHGPS----TDGIDIDSSKWVLIQNCDIDCNDDNFCLKAGRDWDG 311
Query: 263 IAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGR 322
RPT V IR + + +G GSE +G I +V V I + NG+ ++ R
Sbjct: 312 QRVNRPTEYVVIRNCIARKGAG-LFTLGSETAGSIRHVYVSNIKGLGTSNGLNIKSALTR 370
Query: 323 GGYIRQIVISDAELYNINVAFGACGNCG-----SHPDDDFDPDALPA-----IDQI---- 368
GG + I + + ++ ++ N S + +D D++P + ++
Sbjct: 371 GGTVEDISLQNIQMDSVKTFVKISMNWNPSYSYSKLPEGYDIDSIPIHWKKLLKEVPASK 430
Query: 369 ---TFKDIIGTNITIAG-----NFTGIQEAPFANICLSNISLSINPG---SYNS-WECSN 416
TFK+I +NI + G N G++ + NI L+++ + SY+ W N
Sbjct: 431 GIPTFKNISLSNIDVKGAEKAMNVKGLENSIIENISLNDVHIEAKTAGGISYSKDWNLEN 490
Query: 417 IHGSSE 422
+ +E
Sbjct: 491 VSIKTE 496
>gi|390436865|ref|ZP_10225403.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 430
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 159/324 (49%), Gaps = 37/324 (11%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
++I +F AV D +L+T A Q AI S A+ G + +P+G++LTG+ L S +TL L
Sbjct: 4 INIIDFDAVPDATSLSTQAIQRAI---DSAAE--GDTVLIPAGRFLTGALFLKSKMTLEL 58
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIEL--PGRRYKSLINGYMLRDVVVTGDNGTIDG 158
K AV+LGSQ + + + GI++ P +++N R+V V G +GT+DG
Sbjct: 59 AKDAVLLGSQQLEDYP---EIATRVAGIDMVWP----TAMLNINQCRNVTVCG-SGTLDG 110
Query: 159 QGSVWWDWF-------------SSQSLNY------SRPHLVEFISSENVVVSNLTFLNAP 199
QG+VWW F + + L + RP + SE V + + T ++
Sbjct: 111 QGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDFTSKDSG 170
Query: 200 AYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWD 259
+N+H Y V++Q ++V P T GI DSS V +E C ++ D I +KSG
Sbjct: 171 FWNLHVCYSKQVNLQRLNVMNAT-GPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRG 229
Query: 260 EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTT 319
R D+ IR L SG + GSE SGGI NV +E + G ++
Sbjct: 230 AEAQQLARTARDIIIRDCTLLKGSG--ITLGSETSGGIENVIIEHNRFSGTGVGFRIKSA 287
Query: 320 KGRGGYIRQIVISDAELYNINVAF 343
+ RGG+I+ I++ + ++ F
Sbjct: 288 RNRGGWIKNIIVRHLIMEDVGYPF 311
>gi|418045389|ref|ZP_12683485.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
gi|351678471|gb|EHA61618.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
Length = 446
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 177/405 (43%), Gaps = 67/405 (16%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V++ +FGA GDG+T + +F+ AI + + +GG +L VP G +LTG +L S++ L
Sbjct: 24 REVNLLDFGARGDGRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLKSNIEL 80
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ KG + + VV L + GIEL Y L+ +V +TG +G +DG
Sbjct: 81 HV-KGTIKFIPDPERYLPVV--LTRF-EGIELYN--YSPLVYALDCENVAITG-SGVLDG 133
Query: 159 QG--SVWWDWFSSQSL----------------------------------NYSRPHLVEF 182
WW W + +Y RP V+F
Sbjct: 134 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
NV+V + +N+P + +HPV NV I+NI + + P GI P+S + IE
Sbjct: 194 YRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEK 251
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR-RVLLQSSSGSSVAFGSEMSGGISNVQ 301
C G D++ +KSG D G G P+ + +R +++ +S + GSEMSGG+ NV
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 302 VEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD-------AELYNINVAFGACGNCGSHPD 354
+ + +T RGGY+ I D E+ IN+ +
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY----------- 360
Query: 355 DDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
D+ + + LP + + K++ T A G++ +I +S+
Sbjct: 361 DNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISD 405
>gi|442804291|ref|YP_007372440.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740141|gb|AGC67830.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 455
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 154/315 (48%), Gaps = 39/315 (12%)
Query: 48 AVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVIL 107
A GDG+T + A Q AI + + GG ++Y G +LTGS L S +TL + +G +
Sbjct: 12 AAGDGRTDCSNAIQRAI---DTVSASGGGKVYFRPGIYLTGSIFLKSGVTLEIGEGVELR 68
Query: 108 G----SQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVW 163
G + P W V G +E P LIN +V +TG GTIDGQG W
Sbjct: 69 GIIDETAYPDIWTRV-----AGIEMEWPA----GLINVIGQANVTITG-KGTIDGQGFYW 118
Query: 164 WD--W-----------FSSQSLNYS------RPHLVEFISSENVVVSNLTFLNAPAYNIH 204
W+ W ++ + L ++ RP + +S V + +LT +P +N+H
Sbjct: 119 WNKYWGEDRLGGMRKEYTGKGLRWAVDYDCKRPRNILIYNSSQVTLRDLTLRRSPFWNVH 178
Query: 205 PVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIA 264
Y ++V++ + + E P T GI DSS NV IE+C I D I +K+G D G+
Sbjct: 179 ICYSTDVYVSGLVIK-DNEGPSTDGIDVDSSRNVLIENCNIECNDDNICIKAGRDADGLR 237
Query: 265 YGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGG 324
RP+ ++ +R + SG+ V GSE SG I NV++ +I + G ++ RGG
Sbjct: 238 VNRPSENIVVRNCSI--GSGAGVTIGSETSGSIRNVEIYQIKANGTDGGFRIKSALTRGG 295
Query: 325 YIRQIVISDAELYNI 339
I I + D E+ N+
Sbjct: 296 VIENIRVHDFEMVNV 310
>gi|330836022|ref|YP_004410663.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
gi|329747925|gb|AEC01281.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
Length = 459
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 184/416 (44%), Gaps = 52/416 (12%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
I EFGAV +G + + A S + G ++ +PSG W TG L S +T L +
Sbjct: 6 IREFGAV-EGAGHDAGSAIAAAVAEAS---RHGGEVLIPSGTWHTGPVTLASGITFRLAE 61
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
G+ ++ + D+ P+ S G+ I+ DV VTG G IDG G
Sbjct: 62 GSRLVFIPDE---DLYVPVYSRWEGVSCWCMHPCLFISES--HDVTVTG-TGVIDGSGKS 115
Query: 163 WWDWFSSQ----------------SLN----------------YSRPHLVEFISSENVVV 190
WW+ + +LN + RP L++ + S V V
Sbjct: 116 WWESARRKRALHMKPETPMEKKLAALNPGYADQPGGGGGRQCQFLRPPLLQILDSTRVTV 175
Query: 191 SNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHD 250
+T +P + +HPV+ S + +++ + P ++P T GI DS +V + C++ +G D
Sbjct: 176 EGVTLTGSPFWTLHPVFSSGLTFRDVKIINPADAPNTDGIDIDSCQDVMVTGCLVDVGDD 235
Query: 251 AISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I+LKSG GIA GRPT +V + ++S+ G + GSE + GIS + E +
Sbjct: 236 GIALKSGSGPDGIAAGRPTRNVRVSGCTVRSAHG-GIVIGSETAAGISGLVAEDCLFDGT 294
Query: 311 LNGIEFRTTKGRGGYIRQIVISDAELYN--INVAFGACGNCGSHPDDDF----DP--DAL 362
GI +T +GRGG I + + N +A CG+ F +P D
Sbjct: 295 DRGIRIKTRRGRGGAISDLRFERLTMRNNLCPLAINMYYRCGTTEGSLFSLSPEPIDDTT 354
Query: 363 PAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLSINPGSYNSWECSNI 417
P+I I +D + T + F G+ E P + + + S + P S S + S++
Sbjct: 355 PSIGNILVRDCVATGSQASAGFIVGLPERPITELVVEDSSFGVMPESNVSTDESDM 410
>gi|15643203|ref|NP_228247.1| exo-poly-alpha-D-galacturonosidase [Thermotoga maritima MSB8]
gi|4980944|gb|AAD35522.1|AE001722_6 exo-poly-alpha-D-galacturonosidase, putative [Thermotoga maritima
MSB8]
Length = 448
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 177/405 (43%), Gaps = 67/405 (16%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V++ +FGA GDG+T + +F+ AI + + +GG +L VP G +LTG +L S++ L
Sbjct: 26 REVNLLDFGARGDGRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLKSNIEL 82
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ KG + + VV L + GIEL Y L+ +V +TG +G +DG
Sbjct: 83 HV-KGTIKFIPDPERYLPVV--LTRF-EGIELYN--YSPLVYALDCENVAITG-SGVLDG 135
Query: 159 QG--SVWWDWFSSQSL----------------------------------NYSRPHLVEF 182
WW W + +Y RP V+F
Sbjct: 136 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 195
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
NV+V + +N+P + +HPV NV I+NI + + P GI P+S + IE
Sbjct: 196 YRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEK 253
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR-RVLLQSSSGSSVAFGSEMSGGISNVQ 301
C G D++ +KSG D G G P+ + +R +++ +S + GSEMSGG+ NV
Sbjct: 254 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 313
Query: 302 VEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD-------AELYNINVAFGACGNCGSHPD 354
+ + +T RGGY+ I D E+ IN+ +
Sbjct: 314 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY----------- 362
Query: 355 DDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
D+ + + LP + + K++ T A G++ +I +S+
Sbjct: 363 DNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISD 407
>gi|414344702|ref|YP_006986194.1| glycoside hydrolase family protein [Gluconobacter oxydans H24]
gi|411030009|gb|AFW03263.1| glycoside hydrolase family 28 [Gluconobacter oxydans H24]
Length = 477
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 185/396 (46%), Gaps = 54/396 (13%)
Query: 46 FGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
+ A DG+T + A Q AI + ++ GG + + SG WL+G +L +H+TL LEKG+
Sbjct: 56 YSARHDGRTNDGPAIQRAI---TACSEAGGGVVSLASGIWLSGPLSLKNHVTLNLEKGST 112
Query: 106 ILGSQNPS--HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS-V 162
+LGS + HW + G+ + PG ++L++ ++DV +TG G IDG G+ V
Sbjct: 113 LLGSSDTRLFHWAFL------GKAAQ-PG---EALVSAIDVQDVAITG-QGHIDGNGAAV 161
Query: 163 WWDWF-------SSQSLNYS-------------RPHLVEFISSENVVVSNLTFLNAPAYN 202
WW +S L Y RP L+EF ++ +S +T N+P +
Sbjct: 162 WWPQAVRAHKTQTSGPLPYGPDYPGVPAANGLPRPWLIEFSHVQHGRISGVTATNSPMWT 221
Query: 203 IHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYG 262
+ S + I ++++ P S T GI SSD+V + + IA G D I++KSG + G
Sbjct: 222 VVVRESSQIRIDHLTIRNPASSRNTDGIDLVSSDHVTMSNLEIATGDDNIAIKSGLTQPG 281
Query: 263 IAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGR 322
A +D+ I + G ++ GSE++ G ++++ + ++L+G+ ++ + R
Sbjct: 282 QA----ASDISITQSRF--GEGHGLSIGSELANGAHHIRISDVSFQNTLSGLRIKSGRDR 335
Query: 323 GGYIRQIVISDAELYNINVAFGACGNCGSHPDDD------FDPDA-----LPAIDQITFK 371
GG I I + ++ V P +P A P I +T
Sbjct: 336 GGDIGWISAEHLTMDHVRVPLSISDYYAGQPGGTQQTALMTEPAAPVTSTTPHIHDVTIT 395
Query: 372 DIIGTNITIAGNFTGIQEAPFANICLSNISLSINPG 407
D+ TN G G+ EAP + L ++ LS G
Sbjct: 396 DMTATNAGTVGVVLGLPEAPIEGLTLRHVRLSARKG 431
>gi|323452523|gb|EGB08397.1| hypothetical protein AURANDRAFT_26417 [Aureococcus anophagefferens]
Length = 460
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 202/435 (46%), Gaps = 57/435 (13%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWL-TG 88
D PT PR V +GAV DG T F+ AI + D GG ++ G +L G
Sbjct: 27 DPPTFPPRDFYVH--HYGAVPDGSTDALEGFRLAIAAAR---DAGGGRVVAKGGTFLLRG 81
Query: 89 SFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVV 148
+L ++ L++ K + + + + + + + + G EL Y LI + +V
Sbjct: 82 GLDLYDNVQLYVAKRTTLRWAADRTGF--LPAVLTKFEGTELFN--YHPLIRAFEAENVS 137
Query: 149 VTGD---NGTIDGQGSVW-----WDWFSSQSLNYSR--------------PHLVEFISSE 186
V G N +DG G W D + L S P V+
Sbjct: 138 VVGADPANSVLDGGGDGWPLKAPKDAKKLRELGASNAPVEARQFGGKGLPPSFVQPFRCR 197
Query: 187 NVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIA 246
V ++N + +NAP + +HPVY NV ++N+ V+ + P T G+ P++ +V +E+C+I+
Sbjct: 198 RVSLANFSLVNAPFWAVHPVYSENVWVRNLRVNTSWDRPNTDGVDPEACKDVLVENCVIS 257
Query: 247 MGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIH 306
G DA++LK+G D G G + ++ +RR +L +S + + GSE+SGG+ NV +
Sbjct: 258 AGDDAVALKTGRDADGWRVGVASENIVVRRNVL-ASRFNGICVGSEVSGGVDNVFFLENR 316
Query: 307 LYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFD--PDALP- 363
+ + + I ++ RG ++R + ++ + Y++ G+C H +D+ A P
Sbjct: 317 IERAFHAIFVKSNSERGSFVRYVHVAHVKAYDL------AGDC-IHFTNDYKGVRGARPT 369
Query: 364 AIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI----SLSINP----------GSY 409
++ FKD+I + A T + +P A++ + ++ ++ P +
Sbjct: 370 TFEKFAFKDVICRSAVFAIRATSLAASPIADVTIRDVIVKSTMRTTPDHPVSHPVAVANV 429
Query: 410 NSWECSNIHGSSESV 424
+WE +N+ + ++V
Sbjct: 430 ANWEVANLRVNGQAV 444
>gi|384047530|ref|YP_005495547.1| glycoside hydrolase Family 28 [Bacillus megaterium WSH-002]
gi|345445221|gb|AEN90238.1| Glycoside Hydrolase Family 28 [Bacillus megaterium WSH-002]
Length = 465
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 177/371 (47%), Gaps = 55/371 (14%)
Query: 5 VALLLLL---ALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQ 61
+ L+L+L A A+ + +++ + QP P + +I +GA GDGK+ +T AF+
Sbjct: 11 MTLMLVLPFSAQGEALSASEKITAVKEQIQPPSFPN-RTFNIKRYGAAGDGKSDSTAAFK 69
Query: 62 NAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPL 121
AI ++ GG ++ VP G ++TG+ L S++ L + K A I SQNP + + +
Sbjct: 70 KAI---EAANKAGGGRVVVPPGIYVTGAIYLKSNVNLHVMKKATIKFSQNPDKY--LPAV 124
Query: 122 PSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG--SVWWDWFSSQSL------- 172
+ G+EL Y LI Y +++ +TG+ GT+DGQG WW W +
Sbjct: 125 LTRWEGVEL--YNYSPLIYAYNEKNIAITGE-GTLDGQGDNEHWWPWKGKKEFGWKEGEP 181
Query: 173 ---------------------------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHP 205
+Y RP ++ S+N+++ +T LN+P + I+P
Sbjct: 182 NQQQDRDLLFKMAEEKVPVKERVFGKGHYLRPSFIQPYHSKNIMIKGVTILNSPMWQINP 241
Query: 206 VYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAY 265
V N+ I ++ + P G+ P+SS NV I+D G D I++KSG + G
Sbjct: 242 VLSENILIDDVKIIG--HGPNNDGVDPESSKNVLIKDSYFDNGDDCIAIKSGRNADGRRI 299
Query: 266 GRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN---GIEFRTTKGR 322
P+ ++ I ++ G V GSE+SG + NV + ++ DS N + +T R
Sbjct: 300 NVPSENIIIEGNEMKDGHG-GVVIGSEISGSVRNVFAQH-NVMDSPNLDRALRIKTNSVR 357
Query: 323 GGYIRQIVISD 333
GG I I S+
Sbjct: 358 GGTIEDIDFSN 368
>gi|261822466|ref|YP_003260572.1| glycoside hydrolase family protein [Pectobacterium wasabiae WPP163]
gi|261606479|gb|ACX88965.1| glycoside hydrolase family 28 [Pectobacterium wasabiae WPP163]
gi|385872775|gb|AFI91295.1| Glycoside hydrolase family 28 [Pectobacterium sp. SCC3193]
Length = 460
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 183/409 (44%), Gaps = 63/409 (15%)
Query: 43 ITEFGAVGDGK--TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+T++GA G LNT AFQ AI A GG ++VP G +L L S++ L L
Sbjct: 38 VTQYGAEGHRLQIALNTEAFQKAI---DDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLDL 94
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM-------LRDVVVTGDN 153
K A I+ S + + + +Y NG++ ++V +TG+
Sbjct: 95 AKDATIVASTEVAAYRATEKT------------KYAEAENGWLPFISIADAQNVAITGE- 141
Query: 154 GTIDGQGSVWWDWF------SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
GTIDGQG+VWW+ + + + RP L+ SS NV+V ++T ++P+++I Y
Sbjct: 142 GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYIKSSSNVLVDSVTLTHSPSFHIVMRY 201
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
+V + + +P +P T I P S N+ I + I D I++K+ + G
Sbjct: 202 SHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNG- 260
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
+++I +L+ G ++ GSE SGG++NV VE S+ GI +T +G+GG ++
Sbjct: 261 VVDNIYIANNILKQGRG--ISIGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVK 318
Query: 328 QIVISDAELYNINV--AFGACGNCG--------------------------SHPDDDFDP 359
I + ++ ++ + F A + P+ FD
Sbjct: 319 NITYRNTKMVDVEIPLVFAAYYKAAPIVQAEVDKMLAEGGFTMGEQIYPPDTDPEQPFDQ 378
Query: 360 DALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLSINPG 407
P +T +++ T T A + G+ EAP + N+ + + G
Sbjct: 379 YKTPHFSNVTIENLESTGKTKAAAYIIGVPEAPLSGFHFDNVRIDADKG 427
>gi|266621133|ref|ZP_06114068.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288867222|gb|EFC99520.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 517
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 180/399 (45%), Gaps = 52/399 (13%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++++ EFGA GDG +T Q AI A ++ +P G + S L SH+ L
Sbjct: 80 TINVKEFGAKGDGLQDDTGFIQAAIL-----ACPKNGRVLIPKGTYRITSLFLKSHIRLE 134
Query: 100 LEKGAVILGSQN-------PSHWDVVDPLPSYGRGI----ELPGRRYKSLINGYMLRDVV 148
L GA++ + P + D Y G LP + +ING + +VV
Sbjct: 135 LGAGAILAADTDRFKYPRLPGMIESYDETEDYNLGTWEGNPLP--MFAGIINGIEVENVV 192
Query: 149 VTGDNGTIDGQGSV--WWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
+ G+ G IDGQ S WW + + RP +V +++ + N+PA+ +HP
Sbjct: 193 IYGE-GLIDGQASFENWWKDAGTMRGAF-RPRMVFLERCKDITLQGFYLKNSPAWVLHPY 250
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
+ + ++ + P +SP T G+ P+S +V I ++G D I++KSG G Y
Sbjct: 251 FSQGLRFLDLDIENPADSPNTDGLDPESCKDVEITGLHFSLGDDCIAVKSGKIYMGRRYK 310
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
P+ ++ IR+ L+++ G +V GSE+ G+ V+V + G+ +T +GRG
Sbjct: 311 TPSENIEIRQCLMENGHG-AVTVGSEVGAGVKAVRVRDCLFRHTDRGLRVKTRRGRG--- 366
Query: 327 RQIVISDAELYNINV----------AFGACGNCGSHPDDDFD----PDALPA------ID 366
+ V+SD +I + +F C PD + +ALPA I
Sbjct: 367 KDSVLSDISFQHIVMDHVMTPFVVNSFYFC-----DPDGKTEYVQCREALPADERTPEIQ 421
Query: 367 QITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLSI 404
++F DI N A +F G+ E I L N+ +S
Sbjct: 422 NLSFTDIKAANCHAAASFLCGLPEQKIRQIELRNVDISF 460
>gi|239628552|ref|ZP_04671583.1| glycoside hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518698|gb|EEQ58564.1| glycoside hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 695
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 190/422 (45%), Gaps = 61/422 (14%)
Query: 35 DPR--PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNL 92
DPR +V++ ++GAV D L+T A Q AI ++KGG ++ +P G + TG+ L
Sbjct: 11 DPRFPDLTVNVLDYGAVADDDKLDTQAIQKAI---DEVSEKGGGKVVIPKGTYDTGAITL 67
Query: 93 TSHLTLFLEKGAVILG-SQNPSHWDVVDPLP-SYGRGIELPGRRYKSLINGYMLRDVVVT 150
++ L LE L +Q+ +H D P Y P Y + I ++ +T
Sbjct: 68 KDNVNLCLEDKETKLQFTQDINH----DNYPLVYSHWEGQPMYNYSAFIYAKDAVNIALT 123
Query: 151 GDNGTIDGQG--SVWWDWFSSQSL-----------------------------NYSRPHL 179
G GT+DGQ W W S + ++ RP+
Sbjct: 124 G-QGTLDGQAGDGTPWCWMSRDYMTDYQDDDRTALINMNNDRVPVEERIFGEGHFLRPNF 182
Query: 180 VEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVC 239
++ I ENV+V +T L +P + ++PV C+NV ++ I H ++ GI P+SS+ V
Sbjct: 183 IQVIGCENVLVEGVTLLRSPMWEVNPVLCTNVTVRGI--HISTKAANNDGIDPESSNYVL 240
Query: 240 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 299
IED G D I++KSG + G A P+ ++ IR + G + GSE+SGG++N
Sbjct: 241 IEDNYFDTGDDCIAIKSGRNADGRATNTPSQNIIIRNNIFADGHG-GITIGSEVSGGVNN 299
Query: 300 VQVEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAF---GACGNCGSHP 353
V + + ++S N + F+T RGG I I + + + +++ A G H
Sbjct: 300 VFADN-NQFNSPNLKYALRFKTNAVRGGIIENIYLRNTTIQSVSDAVVHATMLYEEGRH- 357
Query: 354 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS--INPGSYNS 411
D +P IT +++ T ++ P + + N+ L+ NP +
Sbjct: 358 -----GDYMPQFRNITIENLKSTGGDFGIFVEAFEDVPVTGLVMRNVELNEVENPLRAVN 412
Query: 412 WE 413
WE
Sbjct: 413 WE 414
>gi|148269623|ref|YP_001244083.1| glycoside hydrolase family protein [Thermotoga petrophila RKU-1]
gi|147735167|gb|ABQ46507.1| glycoside hydrolase, family 28 [Thermotoga petrophila RKU-1]
Length = 446
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 178/405 (43%), Gaps = 67/405 (16%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V++ +FGA GD +T + +F+ AI + + +GG +L VP G +LTG +L S++ L
Sbjct: 24 REVNLLDFGARGDERTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLKSNIEL 80
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ KG + + VV L + GIEL Y L+ ++V +TG +G +DG
Sbjct: 81 HV-KGTIKFIPDPERYLPVV--LTRF-EGIELYN--YSPLVYALDCKNVAITG-SGVLDG 133
Query: 159 QG--SVWWDWFSSQSL----------------------------------NYSRPHLVEF 182
WW W + +Y RP V+F
Sbjct: 134 SADNEHWWSWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
NV+V ++ +N+P + +HPV NV I+NI + + P GI P+S + IE
Sbjct: 194 YRCRNVLVEDVKIINSPMWCVHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEK 251
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR-RVLLQSSSGSSVAFGSEMSGGISNVQ 301
C G D++ +KSG D G G P+ + +R +++ +S + GSEMSGG+ NV
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 302 VEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD-------AELYNINVAFGACGNCGSHPD 354
+ + +T RGGY+ I D E+ IN+ +
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY----------- 360
Query: 355 DDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
D+ + + LP + + K++ T A G++ +I +S+
Sbjct: 361 DNEEGEYLPVVRSVFVKNLKATGGKYALRIEGLENDYVKDILISD 405
>gi|116623151|ref|YP_825307.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226313|gb|ABJ85022.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 436
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 159/308 (51%), Gaps = 27/308 (8%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
+T++GA DGKT+NT+A Q AI + A G + G +L+G+ L S++ L L++
Sbjct: 20 VTDYGAKADGKTVNTVALQKAI---DAAAKAGKGVVVFAPGVYLSGALFLKSNMELRLDE 76
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
G I G Q+ + + ++ + GIE+ + +L+N Y +V ++G GT+DG G +
Sbjct: 77 GVEIRGVQDLAAYPLMQTRVA---GIEM--KWPAALLNVYEQSNVRLSG-KGTVDGDGKI 130
Query: 163 WWD--W------FSSQSLNYS------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
WWD W + + L ++ RP L++ S+ V + +LT + +H Y
Sbjct: 131 WWDLYWKMRREEYEPKGLRWAVDYDCRRPRLIQIYKSQGVDLVSLTLKRPGFWTVHICYS 190
Query: 209 SNVHIQNISVH--APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
V + +++ + P T GI DSS +V + C I DAI LK+G D G+
Sbjct: 191 ERVTVDGLTIRNNTDGKGPSTDGIDIDSSSDVLVAHCDIDCNDDAICLKAGRDADGLRVN 250
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL-NGIEFRTTKGRGGY 325
PT V I +++ + + V GSE SGGI +++V+ + + ++ GI F++ RGG
Sbjct: 251 LPTERVRITDNVVRGGA-AGVTIGSETSGGIRHIEVDHLTVMSAVPAGILFKSASTRGGT 309
Query: 326 IRQIVISD 333
I I I +
Sbjct: 310 IEDIAIRN 317
>gi|407978683|ref|ZP_11159511.1| glycoside hydrolase [Bacillus sp. HYC-10]
gi|407414714|gb|EKF36344.1| glycoside hydrolase [Bacillus sp. HYC-10]
Length = 463
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 157/322 (48%), Gaps = 46/322 (14%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++ +GA G+ L+T A Q+AI G ++ +P G +LTG+ L SH+ L L
Sbjct: 55 NVIHYGADEKGEVLSTNAIQSAIDDAHRLK---GGRVVIPKGTFLTGALELKSHVELHLH 111
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
+ A + SQ+P D + + + GIEL Y LI + ++ +TG +GT+DG+G
Sbjct: 112 ENAYVTFSQDPR--DYLPLVLTRYEGIEL--YNYSPLIYAHHAENMAITG-SGTLDGRGD 166
Query: 162 V--WWDW-------------------FSSQSL----------NYSRPHLVEFISSENVVV 190
WW W + + + +Y R ++ +N+++
Sbjct: 167 EHHWWPWKYGTNGQPSQDRDRQLLFEMAEKRIPVEERVFGEGHYLRSSFIQPYQCQNILI 226
Query: 191 SNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHD 250
+T ++P + IHPV C NV ++ +++ P T G+ P+S NV IEDC G D
Sbjct: 227 EGVTVKDSPMWQIHPVLCENVIVRGVNIIG--HGPNTDGVNPESCRNVLIEDCYFDNGDD 284
Query: 251 AISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++KSG +E G G P+ ++ IRR ++ G V GSE+SGG+ V E ++ DS
Sbjct: 285 CIAIKSGRNEDGRRIGVPSENIVIRRNEMRDGHG-GVTIGSEISGGVRYVYAED-NIMDS 342
Query: 311 LN---GIEFRTTKGRGGYIRQI 329
N + +T RGG I I
Sbjct: 343 PNLDRALRIKTNSVRGGTIEHI 364
>gi|170288299|ref|YP_001738537.1| glycoside hydrolase family protein [Thermotoga sp. RQ2]
gi|170175802|gb|ACB08854.1| glycoside hydrolase family 28 [Thermotoga sp. RQ2]
Length = 446
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 178/405 (43%), Gaps = 67/405 (16%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V++ +FGA GD +T + +F+ AI + + +GG +L VP G +LTG +L S++ L
Sbjct: 24 REVNLLDFGARGDERTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLKSNIEL 80
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ KG + + VV L + GIEL Y L+ ++V +TG +G +DG
Sbjct: 81 HV-KGTIKFIPDPERYLPVV--LTKF-EGIELYN--YSPLVYALDCKNVAITG-SGVLDG 133
Query: 159 QG--SVWWDWFSSQSL----------------------------------NYSRPHLVEF 182
WW W + +Y RP V+F
Sbjct: 134 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
NV+V ++ +N+P + +HPV NV I+NI + + P GI P+S + IE
Sbjct: 194 YRCRNVLVEDVKIINSPMWCVHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEK 251
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR-RVLLQSSSGSSVAFGSEMSGGISNVQ 301
C G D++ +KSG D G G P+ + +R +++ +S + GSEMSGG+ NV
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 302 VEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD-------AELYNINVAFGACGNCGSHPD 354
+ + +T RGGY+ I D E+ IN+ +
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY----------- 360
Query: 355 DDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
D+ + + LP + + K++ T A G++ +I +S+
Sbjct: 361 DNEEGEYLPVVRSVFVKNLKATGGKYALRIEGLENDYVKDIMISD 405
>gi|116626800|ref|YP_828956.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229962|gb|ABJ88671.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 462
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 173/403 (42%), Gaps = 61/403 (15%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
IT FGA DGKT T A + AI A GG ++ G +LTG+ +L S++ L +E
Sbjct: 52 EITRFGARADGKTDCTDAIRKAI---DEAARVGGGRVMAREGAFLTGAIHLKSNVNLVVE 108
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ-- 159
KGA + S +P + +V L + G+E Y I + +++ +TG GT+DGQ
Sbjct: 109 KGATLRFSPDPKLYPIV--LTRF-EGLEC--MNYSPFIYAFNQQNIAITG-GGTLDGQAS 162
Query: 160 GSVWWDWFSSQSLN--------------------------------YSRPHLVEFISSEN 187
G WW W + + RP ++ N
Sbjct: 163 GEHWWPWAGKRGARPDDPNQRKARAALVEMAEKGVPVADRKFGDGAWLRPMFIQPYRCTN 222
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAM 247
V + ++T N+P Y +HPV C NV +N+ V + P G P+SS +V I+ C
Sbjct: 223 VQIEDVTITNSPMYEMHPVLCRNVIARNVKVSS--HGPNNDGCDPESSVDVLIDGCTFDT 280
Query: 248 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 307
G D I++KSG + G P+ ++ ++ +++ G V GSE SGGI NV + +
Sbjct: 281 GDDCIAIKSGRNADGRRLHSPSENLIVQNCVMKDGHG-GVTMGSECSGGIRNVFAQDCQM 339
Query: 308 YDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDA--- 361
DS N + F+ RGG I + Y NV G D ++
Sbjct: 340 -DSPNLNVALRFKNNAVRGGVIEHV-------YMRNVKAGQVAQAAIDVDFYYEEGEKGS 391
Query: 362 -LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
P + + ++ T + G + AP +I + N + +
Sbjct: 392 FTPVVRDVEVVNLEVKKCTTPWSLRGFKSAPVRDIRIRNCTFA 434
>gi|266623864|ref|ZP_06116799.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
gi|288864322|gb|EFC96620.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
Length = 438
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 188/407 (46%), Gaps = 59/407 (14%)
Query: 44 TEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKG 103
+E+ G+ L T A Q I + G L + G +LT L + + E+G
Sbjct: 8 SEYHIDNTGERLVTEALQALI----DETSQAGGILVLEKGTYLTAPLFLKNGMEFHFEEG 63
Query: 104 AVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVW 163
AV+ G+ + + V+ P + G G++ Y ++N +DV+++G NGTIDGQG W
Sbjct: 64 AVLKGTTDETKIPVI-PTRAAGIGMDW----YPGVLNCNGQKDVIISG-NGTIDGQGEYW 117
Query: 164 WD--W-----------FSSQSLNYS------RPHLVEFISSENVVVSNLTFLNAPAYNIH 204
W W + + L ++ R V + S + + ++T + + +NIH
Sbjct: 118 WRKYWGDDGKSGMRGEYDKKGLRWACDYDCMRVRNVVIMESSRITLKDITSMRSGFWNIH 177
Query: 205 PVYCSNVHIQNISVHA-PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGI 263
Y ++H+ I + + ESP T GI DS +V +E+C+ D+I +KSG D GI
Sbjct: 178 ICYSDHIHVDGIKIASCGGESPSTDGIDIDSCHDVLVENCVTDCNDDSICIKSGRDADGI 237
Query: 264 AYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG 323
RP D+ ++ ++ +G V GSE+SGG+ + ++ + + + G +++ R
Sbjct: 238 RVNRPCHDITVQNCEIR--AGFGVTIGSEVSGGVYQITLKNLRYHGTDCGFRIKSSVARH 295
Query: 324 GYIRQIVISDAELYNI----------NVAFGACGNCGSHPDD---------DFDPDALP- 363
GYIR + + + N+ N A+ C G + + + PD++P
Sbjct: 296 GYIRDVRVEGLSMVNVKYPFHFFLNWNPAYSYCELPGDYEGEIPEHWKKLLEAIPDSVPK 355
Query: 364 -AIDQITFKDIIGTN------ITIAGNFTGIQEAPFANICLSNISLS 403
+ IT +++ N I+ A + G ++ P ++ N+SL+
Sbjct: 356 TKVSNITIENVTARNEADYNGISRAFHIEGFEDQPVEHVIFKNVSLA 402
>gi|357054504|ref|ZP_09115588.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
gi|355384476|gb|EHG31541.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
Length = 522
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 186/398 (46%), Gaps = 36/398 (9%)
Query: 33 TLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNL 92
T D ++ + +FGA GDG +TL Q AI A +++ +P+G + S L
Sbjct: 74 TTDSEYVTLDVRDFGAKGDGIQDDTLFIQAAIM-----ACPEKSRVLIPAGTYRIVSLFL 128
Query: 93 TSHLTLFLEKGAVILGSQNPSHWDVVDPL-PSYGRGIEL--------PGRRYKSLINGYM 143
++ + L +GAV+ + + + V + SY E P + +I G
Sbjct: 129 KDNVNIELAEGAVLSAYTDRTRFPVFQGMIQSYDEQGEYNLGTWEGNPLPMFTGIITGVN 188
Query: 144 LRDVVVTGDNGTIDGQ-GSVWWDWFSSQSLNYS--RPHLVEFISSENVVVSNLTFLNAPA 200
+++ V+ G G IDG G+ +W+ + ++ RP ++ V V +T N+P+
Sbjct: 189 VKEAVIYG-QGIIDGNAGTGEGNWWHEPKVIHTACRPRMIFLERCRQVTVQGITVRNSPS 247
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+NIHP + ++ ++ V +P +SP T G+ P+S +V I ++G D I++KSG
Sbjct: 248 WNIHPYFSDHLRFFDLKVLSPKDSPNTDGLDPESCKDVEIAGVCFSVGDDCIAVKSGKIY 307
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTK 320
G Y P+ ++ IRR ++ G SV GSEM+GG+ ++ V+ + G+ +T +
Sbjct: 308 MGSTYKCPSKNISIRRCCMRDGHG-SVTIGSEMAGGVKDLTVKDCMFLHTDRGLRIKTRR 366
Query: 321 GRG--GYIRQIVISDAELYNINVAFGACGNCGSHPDDD------FDPDALPAIDQ----- 367
GRG + +IV + ++ F NC D D +ALP D+
Sbjct: 367 GRGKDAVVDKIVFEHIRMDHVMTPFVI--NCFYFCDPDGHSEYVRTKEALPVDDKTPFIK 424
Query: 368 -ITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLS 403
+ F+DI N +A + G+ E + + + +S
Sbjct: 425 SLCFRDIEAENCHVAAAYMYGLPEQRIGRVEMERVRVS 462
>gi|227329691|ref|ZP_03833715.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 460
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 181/409 (44%), Gaps = 63/409 (15%)
Query: 43 ITEFGAVGDGK--TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+T++GA G LNT AFQ AI A GG ++VP G +L L S++ L L
Sbjct: 38 VTQYGAEGHRLQIALNTQAFQKAI---DDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLDL 94
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM-------LRDVVVTGDN 153
K A I+ S + + + +Y NG++ ++V +TG
Sbjct: 95 AKDATIVASTEEAAYRATEKT------------KYAEAENGWLPFISIADAQNVAITG-Q 141
Query: 154 GTIDGQGSVWWDWF------SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
GTIDGQG+VWW+ + + + RP L+ SS NV+V +T ++P++++ Y
Sbjct: 142 GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYIKSSNNVLVDGVTLTHSPSFHVVMRY 201
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
+V + + +P +P T I P S N+ I + I D I++K+ + G
Sbjct: 202 SHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNG- 260
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
+++I +L+ G S+ GSE SGG++NV VE S+ GI +T +G+GG ++
Sbjct: 261 VVDNIYIANNILKQGRGISI--GSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVK 318
Query: 328 QIVISDAELYNINV--AFGACGNCG--------------------------SHPDDDFDP 359
I + ++ ++ + F A + P+ FD
Sbjct: 319 NITYRNTKMVDVEIPLVFAAYYKAAPIVQAEVDKMLAEGGFTMGEQIYPPDTDPEQPFDQ 378
Query: 360 DALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLSINPG 407
P +T +++ T T A + G+ EAP + N+ + + G
Sbjct: 379 YKTPHFSNVTIENLESTGKTKAAAYIIGVPEAPLSGFHFDNVRIDADKG 427
>gi|332666314|ref|YP_004449102.1| polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
gi|332335128|gb|AEE52229.1| Polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
Length = 778
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 199/487 (40%), Gaps = 80/487 (16%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R + SI +GA DG TL+T A A+ + GG + VPSG WLTG L S++
Sbjct: 266 RKDTFSIVRYGAKSDGITLSTPAINQAVNLAH---EAGGGVVVVPSGFWLTGPIVLKSNV 322
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
L + +GA++ S + +V I R ++ I+ ++ +TG G I
Sbjct: 323 NLHISQGALLQFSNKREDFPLVKTTWEGEDAI-----RCQAPISAVEASNIAITG-TGII 376
Query: 157 DGQGSVW------------WD---------------WFSSQSL----------------- 172
DG G VW W W+ S++
Sbjct: 377 DGAGQVWRQVKKDKLTEAQWKKLIASGGVLDEEKRTWYPSENALKGSKIQKPGSIAAGFN 436
Query: 173 --------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES 224
++ RP++V V++ +TF N+PA+ IHP+ C ++ ++++ V P
Sbjct: 437 LNNCSEFKDFLRPNMVSLSRCTQVLLEGITFQNSPAWTIHPLLCEHITLRDVIVRNPWYG 496
Query: 225 PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSG 284
+ +S N +E C G D I +KSG D G G PT ++ +R + G
Sbjct: 497 QNNDALDLESCRNGLVEGCSFDTGDDGICIKSGRDAEGRKRGVPTENIIVRNCTVFHGHG 556
Query: 285 SSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI----- 339
V GSEMSGG+ N+ V + + G+ F+T +GRGG + I ++D + NI
Sbjct: 557 GFV-IGSEMSGGVRNLFVSDCNFLGTDVGLRFKTARGRGGIVENIYVTDINMTNIPGEAI 615
Query: 340 --NVAFGAC------GNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQE 389
++ + A G P+ +P + P K+I+ G+ E
Sbjct: 616 LFDMYYMAKDPVSLNGEKNVLPEMKAEPLGEGTPQFRNFHIKNIVCQGAETGILIRGLPE 675
Query: 390 APFANICLSNISLSINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRY 449
P NI + N +++ N G E NI + +F + ++ NS IRY
Sbjct: 676 MPIKNISIENANITCNQGLV-CVESENIRLKNIGLFTQEKRVMQ--VQNSQKVTLDGIRY 732
Query: 450 YGRASFL 456
G L
Sbjct: 733 QGPVDLL 739
>gi|270339777|ref|ZP_06005984.2| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
gi|270333786|gb|EFA44572.1| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
Length = 464
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 159/340 (46%), Gaps = 53/340 (15%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
++V++ +FGA GDG +NT AF AI L +GG +L VP+G WLTG +L ++ L
Sbjct: 46 NTVNLKDFGATGDGTAMNTEAFSKAISALNK---QGGGRLVVPAGIWLTGLISLKDNIDL 102
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LE+ AVI+ S P D++ P+ G+ P + I ++V +TG+ G IDG
Sbjct: 103 HLERNAVIVFS--PDKRDLI-PVKD-GK----PDAKAAPCIRASKRKNVSITGE-GIIDG 153
Query: 159 QGSVW-----------------------------WDWFSSQSL-----NYS-----RPHL 179
G W W F+ + L NY R HL
Sbjct: 154 NGEYWRPVKRGKVSDTEWNQYKAMGGTITEKGDLWYPFNLKHLPNVADNYDAQEKMRTHL 213
Query: 180 VEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVC 239
V F +NV+V +T N+P +++ P C+NV I N+ V P + I + NV
Sbjct: 214 VRFTDCQNVLVQGVTLRNSPKFHLVPQRCTNVIIDNVKVICPWNAQNGDAIDIGNCKNVL 273
Query: 240 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 299
I + I G D I +K G + G+ G P +++I+ ++ + G V GSE GG+ N
Sbjct: 274 IVNNTIDAGDDGICMKGGVGQKGVKDG-PCENINIQDNIVYHAHGGFV-IGSEFCGGMKN 331
Query: 300 VQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI 339
+ V + G+ F++ GRGG I IS + +I
Sbjct: 332 IFVHNNTFAGTDTGLRFKSGVGRGGTTSDIYISKIYMTDI 371
>gi|325105433|ref|YP_004275087.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974281|gb|ADY53265.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 569
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 201/453 (44%), Gaps = 81/453 (17%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
+ + + ++GA DG TLNT + AI + + GG +++ G WLTG L S++
Sbjct: 56 KKDTFYVEKYGAKPDGITLNTKSINAAI---DACSKNGGGVVFLGGGVWLTGPIQLKSNV 112
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
L +++ A++L +++ S + +V+ G P +S I+ + + +V +TG+ G I
Sbjct: 113 NLHVKRDAILLFTKDKSQYKLVE-----GNWEGKPALVNESPISAFNVENVAITGE-GII 166
Query: 157 DGQGSVW------------WD---------------WFSSQSL----------------- 172
DG G VW W W S+S
Sbjct: 167 DGSGEVWRLVKKGKLTASQWKNLVASGGVLSKDGQSWMPSESYKKGDEAGNARYFKAGSK 226
Query: 173 --------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES 224
++ RP+L +S+ +++ +TF N+PA+ +HP+ ++ ++N+ V P +
Sbjct: 227 LADYEPMKDFYRPNLFVIANSKRILLEGVTFQNSPAWCLHPLMSEDLVLRNVFVKNPWYA 286
Query: 225 PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSG 284
GI +S NV IE+ +G D I +KSG DE G PT DV +R ++ + G
Sbjct: 287 QNGDGIDIESCKNVLIENSTFDVGDDGICIKSGRDEAGRKRAMPTEDVIVRNNVVYHAHG 346
Query: 285 SSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI----- 339
V GSEMSGG N+ V + G+ F+TT+GRGG + + I+++ + +I
Sbjct: 347 GFV-IGSEMSGGAKNLYVYNNSFIGTDIGLRFKTTRGRGGIVENVYIANSYMKDIPGDAI 405
Query: 340 --NVAFGA------CGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQE 389
++ + A G P +F P +A P K+++ GI E
Sbjct: 406 LFDMYYEAKDPVPLAGEKRPAPVAEFKPVTEATPQFKNFYIKNVVCNGADKGLFVRGIPE 465
Query: 390 APFANICLSNISLSINPG----SYNSWECSNIH 418
NI L +++L G N+ N+H
Sbjct: 466 MNVQNIYLEDLTLEAKTGIEIIEGNNINIKNVH 498
>gi|421083085|ref|ZP_15543964.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
gi|401702311|gb|EJS92555.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
Length = 460
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 181/409 (44%), Gaps = 63/409 (15%)
Query: 43 ITEFGAVGDGK--TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+T++GA G LNT AFQ AI A GG ++VP G +L L S++ L L
Sbjct: 38 VTQYGAEGHRLQIALNTEAFQKAI---DDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLDL 94
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM-------LRDVVVTGDN 153
K A I+ S + + + +Y NG++ ++V +TG
Sbjct: 95 AKDATIVASTEVAAYRATEKT------------KYAEAENGWLPFISIADAQNVAITG-Q 141
Query: 154 GTIDGQGSVWWDWF------SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
GTIDGQG+VWW+ + + + RP L+ SS NV+V +T ++P++++ Y
Sbjct: 142 GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRY 201
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
+V + + +P +P T I P S N+ I + I D I++K+ + G
Sbjct: 202 SHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNG- 260
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
+++I +L+ G ++ GSE SGG++NV VE S+ GI +T +G+GG ++
Sbjct: 261 VVDNIYIANNILKQGRG--ISIGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVK 318
Query: 328 QIVISDAELYNINV--AFGACGNCG--------------------------SHPDDDFDP 359
I + ++ ++ + F A + P+ FD
Sbjct: 319 NITYRNTKMVDVEIPLVFAAYYKAAPIVQAEVDKMLAEGGFTMGEQIYPSDTDPEQPFDQ 378
Query: 360 DALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLSINPG 407
P +T +++ T T A + G+ EAP + N+ + + G
Sbjct: 379 HKTPHFSNVTIENLESTGKTKAAAYIIGVPEAPLSGFHFDNVRIDADKG 427
>gi|333382504|ref|ZP_08474174.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828815|gb|EGK01507.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
Length = 717
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 150/325 (46%), Gaps = 25/325 (7%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
S ++ ++GAV DG T+NT A Q AI A GG + GK+LTGS L +
Sbjct: 44 RSYNVADYGAVADGVTMNTKAIQKAI---DECARNGGGTVTFSPGKYLTGSVYLKEGVHF 100
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ K +LGS + + ++ + GIE+ + +LIN ++V+V+G+ G +
Sbjct: 101 IIPKHTTLLGSTDLKDYPEMNTRVA---GIEM--QWPSALINVLGQKNVMVSGE-GVVHA 154
Query: 159 QGSVWWDWFSSQSLNY-------------SRPHLVEFISSENVVVSNLTFLNAPAYNIHP 205
QG V+WD + + +Y RP + S +V V LTF A + I
Sbjct: 155 QGKVFWDSYWAMRKDYEAKGLRWIVDYDCKRPRTLLVSESSDVTVKGLTFRQAGFWTIQI 214
Query: 206 VYCSNVHIQNISVH--APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGI 263
+Y S + + + P T G+ DSS + +E+C I D LKSG D G+
Sbjct: 215 LYSSYCTVDGVIIQNNVGGHGPSTDGVDIDSSSYILVENCDIDCNDDNFCLKSGRDADGL 274
Query: 264 AYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG 323
RPT + IR + + G + GSE SGGI +V E + + GI ++ RG
Sbjct: 275 RVNRPTEYIVIRNCI-SRAGGGLLTCGSETSGGIRHVLAEGLKAKGTTVGIRLKSAMNRG 333
Query: 324 GYIRQIVISDAELYNINVAFGACGN 348
G I I D E+ N+ F A N
Sbjct: 334 GTTEHIYIRDVEMDNVRTVFEATMN 358
>gi|354594579|ref|ZP_09012618.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
gi|353672255|gb|EHD13955.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
Length = 430
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 172/396 (43%), Gaps = 53/396 (13%)
Query: 46 FGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
+G DG T+NT A Q A+ + GG + + G WL+G L S++T L +G V
Sbjct: 19 YGGRADGNTINTDAIQKAVDMCAQY---GGGVVLLSKGVWLSGPITLKSNITFSLGQGTV 75
Query: 106 ILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD 165
+ + + I+ P ++ ++ I + DV + G GTIDG G W
Sbjct: 76 LKANNTDDQFK--------NAFIDYPVQKGEAFILADHVHDVSIVG-QGTIDGDGQQTW- 125
Query: 166 WFSSQSLN--------------YS---------RPHLVEFISSENVVVSNLTFLNAPAYN 202
W ++ +N YS RP L+EF +NV + + NAP +N
Sbjct: 126 WAKAKQINALLHQGNDQLFKQEYSGVPIANGVPRPWLIEFNDVQNVHLKGVLLTNAPMWN 185
Query: 203 IHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYG 262
+ +V+I I + P +SP T GI SS + I D I+ G D IS+KSG +
Sbjct: 186 VVIRSSQDVNIDTIKIQNPKDSPNTDGIDIVSSQYIQISDVDISTGDDNISIKSGLQQ-- 243
Query: 263 IAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGR 322
P D+ I+ L+ G ++ GSE + GI V ++ IH S NGI ++ + R
Sbjct: 244 -GNALPARDITIKNSLMH--DGHGISIGSETANGIGKVTIQNIHFSGSTNGIRIKSQRDR 300
Query: 323 GGYIRQIVISDAELYNIN--VAFGACGNCGSHPDDDFDPDAL---------PAIDQITFK 371
G I I + ++ N+ + A + S+ F +AL P I I
Sbjct: 301 GNSIGPITVDHIQMENVTNPIVINASYSVNSYKKRSF-KEALKQKELTSLTPLIHDILLS 359
Query: 372 DIIGTNITIAGNFTGIQEAPFANICLSNISLSINPG 407
DI N + +G+ EA NI L +I + G
Sbjct: 360 DIHVVNADNSIILSGLPEAFIWNIVLDHIFMQAKHG 395
>gi|374311248|ref|YP_005057678.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753258|gb|AEU36648.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 461
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 165/323 (51%), Gaps = 27/323 (8%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+++FGA GDG TL++ A Q AI A G + VP+G +L GS + S +TL +E
Sbjct: 36 KVSDFGAKGDGTTLDSPAIQRAI----DAASHSGGTVIVPAGTYLCGSIFVKSGVTLQIE 91
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
K A I GSQ + + + +P+ GIE+ +L+N Y ++ +TG G G
Sbjct: 92 KDATIRGSQKITDYPL---MPTRVAGIEMTWP--AALVNVYEQKNAAITGGGTID-GDGK 145
Query: 162 VWWDWFSSQSLNY-------------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
++WD + + +Y RP LV+ +S+++ +S L + + +H Y
Sbjct: 146 IFWDSYRTLRSDYDPKGLRWAADYDAKRPRLVQIFNSDHIKLSGLMLKRSGFWTVHICYS 205
Query: 209 SNVHIQNISVH--APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
++ + +++ + P T GI DSS + ++ I++ DA+ LK+G D G+
Sbjct: 206 HDIEVDGVTIRNNEDGKGPSTDGIDIDSSKKILVQHADISVNDDALCLKAGRDSDGLRVN 265
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGY 325
RPT DV ++ ++++ + + V FGSE SGG NV+ I + + GI F++ RGG+
Sbjct: 266 RPTEDVVLKDSVVRAGA-AGVTFGSETSGGFRNVEAYGITVLKPVPVGILFKSAHTRGGW 324
Query: 326 IRQIVISDAELYNINVAFGACGN 348
I I D +L ++ VA N
Sbjct: 325 AEDIRIHDMDLKDVAVAIRVIMN 347
>gi|281419728|ref|ZP_06250727.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
gi|281406257|gb|EFB36937.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
Length = 873
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 165/390 (42%), Gaps = 67/390 (17%)
Query: 32 PTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFN 91
P + I+ +GA + N + L S KGG + +P G W TG+
Sbjct: 39 PNIKQATKKYVISAYGAKQNASAAQNQKAINKLIALVS--KKGGGTIVIPKGTWRTGAIE 96
Query: 92 LTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG 151
+ S + L LE+GAV+ + P + +V L Y I Y + D+ +TG
Sbjct: 97 MKSFVELNLEEGAVLQFAFEPKLYPLVRTAWE-----GLACWNYSPCIYAYKVSDIAITG 151
Query: 152 DNGTIDGQGS--VWWDWFSSQSLNYS---------------------------------- 175
GTIDG G+ WW W + Y
Sbjct: 152 -KGTIDGGGNNDTWWQWNGNPYFGYKEGVTKEHQKMGSRARLQKMAENGVPFDERKFGMG 210
Query: 176 ---RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVP 232
RP LV F+ SE +++ ++ +N+P + +HP+ C ++ + ++V E P G P
Sbjct: 211 QGLRPQLVNFVRSERILIKDVKMINSPFWVMHPLLCKDITVDGVTVWN--EGPNGDGCDP 268
Query: 233 DSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSE 292
++ +NV I++CI G D I++KSG + G + +P+ ++ IR ++ G V GSE
Sbjct: 269 EACENVLIQNCIFHTGDDCIAIKSGRNNDGRLWNKPSKNIIIRNCRMEDGHG-GVVIGSE 327
Query: 293 MSGGISNVQVEKIHLYDS--LNGI-EFRTTKGRGGYIRQIVISDAELYNINVAFGACGNC 349
+SGG NV E + DS L I +T RGG I+ I + V G C
Sbjct: 328 ISGGCENVYAENCEM-DSPHLERILRIKTNNCRGGLIQNIHMR-------KVTVGQCKEA 379
Query: 350 GSHPDDDFDPDAL------PAIDQITFKDI 373
+ D++P P + ++ +D+
Sbjct: 380 VLKINLDYEPREACYRGFEPTVRNVSMEDV 409
>gi|238794982|ref|ZP_04638578.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
gi|238725685|gb|EEQ17243.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
Length = 442
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 153/325 (47%), Gaps = 37/325 (11%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++I FGA G+ L T A Q+AI G + VP G++LTG+ L +HL
Sbjct: 15 KLNILAFGADASGQQLATAAIQHAIDIAAP-----GDTVVVPPGRYLTGALFLKNHLIFE 69
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIEL--PGRRYKSLINGYMLRDVVVTGDNGTID 157
L+ GAV+LGS+ + + + GI++ P +IN DV V G +GTID
Sbjct: 70 LQTGAVLLGSRELEDYPLRQTRVA---GIDMVWP----TGIINILQCHDVCVCG-SGTID 121
Query: 158 GQGSVWWDWF-------------SSQSLNY------SRPHLVEFISSENVVVSNLTFLNA 198
GQG+VWW F S + L + RP + SE V +S T +
Sbjct: 122 GQGAVWWHKFWGTDENGGMLADYSQRGLRWVVDYDCQRPRNLVVYRSEQVEMSGFTSRES 181
Query: 199 PAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGW 258
+NIH Y ++++ ++ V P T GI DSS V +E C ++ D I +K+G
Sbjct: 182 GFWNIHLCYSQHLYLHHLQVENSG-GPSTDGIDIDSSQQVRVEHCRVSCNDDNICVKAGR 240
Query: 259 DEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRT 318
G D+ IR L SG + GSE SGGI V +E I + G ++
Sbjct: 241 GAEAERIGATARDIVIRECELLHGSG--ITLGSETSGGIEQVLIENITFSGTGVGFRIKS 298
Query: 319 TKGRGGYIRQIVISDAELYNINVAF 343
+ RGG+IR + +S ++ +++ F
Sbjct: 299 ARNRGGFIRHVRVSGLQMTDVHYPF 323
>gi|403057563|ref|YP_006645780.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402804889|gb|AFR02527.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 460
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 182/409 (44%), Gaps = 63/409 (15%)
Query: 43 ITEFGAVGDGK--TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+T++GA G LNT AFQ AI A GG ++VP G +L L S++ L L
Sbjct: 38 VTQYGAEGHRLQIALNTQAFQKAI---DDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLDL 94
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM-------LRDVVVTGDN 153
K A I+ S + + + +Y NG++ ++V +TG
Sbjct: 95 AKDATIVASTEEAAYRATEKT------------KYAEAENGWLPFISIADAQNVAITG-Q 141
Query: 154 GTIDGQGSVWWDWF------SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
GTIDGQG+VWW+ + + + RP L+ SS NV+V +T ++P++++ Y
Sbjct: 142 GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRY 201
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
+V + + +P +P T I P S N+ I + I D I++K+ + G
Sbjct: 202 SHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNG- 260
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
+++I +L+ G ++ GSE SGG++NV VE S+ GI +T +G+GG ++
Sbjct: 261 VVDNIYIANNILKQGRG--ISIGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVK 318
Query: 328 QIVISDAELYNINV--AFGA----------------------CGNCGSHPDDD----FDP 359
I + ++ ++ + F A G PD D FD
Sbjct: 319 NITYRNTKMVDVEIPLVFAAYYKAAPIVQAEVDKMLAEGGFTMGEQIYPPDTDPAQPFDQ 378
Query: 360 DALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLSINPG 407
P +T +++ T T A + G+ EAP + N+ + + G
Sbjct: 379 YKTPHFSNVTIENLESTGKTKAAAYIIGVPEAPLSGFHFDNVRIDADKG 427
>gi|329894082|ref|ZP_08270067.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
gi|328923254|gb|EGG30574.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
Length = 487
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 169/398 (42%), Gaps = 57/398 (14%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
+ FGAV DG + A Q AI + +S +GG + G +LTG +L S + L LEK
Sbjct: 63 VENFGAVSDGVFDCSDAIQKAIEHAES---QGGGTVVFTQGVYLTGPIHLRSKIALHLEK 119
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS- 161
A + +P+ + + + + G+EL G + LI Y L DV +TG GT+DG +
Sbjct: 120 DATLKFVTDPNRY--LPAVFTRWEGMELMG--FSPLIYAYGLNDVAITG-QGTLDGGAND 174
Query: 162 -VWWDWFSSQSL------------------------------------NYSRPHLVEFIS 184
WW W + RP ++F
Sbjct: 175 QTWWPWKGPHKEAHWDLIEGQDQKPARDYLFAMAERGVPPRERVFADGGFLRPPFLQFYD 234
Query: 185 SENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCI 244
+ ++V + NAP + IHPV +V I+ VH P + G P+S + V IEDC+
Sbjct: 235 CQRILVEGIKITNAPFWLIHPVLSRDVTIRG--VHCQSYGPNSDGCDPESCERVVIEDCV 292
Query: 245 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 304
G D I+LKSG + G G P DV ++ ++ G V GSE+SGG++NV V
Sbjct: 293 FDTGDDCIALKSGRNADGRRIGVPCKDVVVQNCHMKEGHG-GVVIGSEISGGVANVHVRH 351
Query: 305 IHLYDS---LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDA 361
+ DS I +T RGG I + S + ++ F + ++
Sbjct: 352 CTM-DSPHLERAIRIKTNAQRGGLIEHLRYSKITIGSVKDVF----VINFYYEEGDRGKW 406
Query: 362 LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
+P + I D+ N G ++P ++ L N
Sbjct: 407 MPLVRDIEITDLTVAKAQRVFNLRGFPQSPITDVSLRN 444
>gi|307129970|ref|YP_003881986.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
gi|306527499|gb|ADM97429.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
Length = 467
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 178/410 (43%), Gaps = 63/410 (15%)
Query: 42 SITEFGAVGDGK--TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++T +GA G LNT +FQ AI A GG + VP+G +L L S++ L
Sbjct: 44 NVTRYGAEGHRLQIALNTESFQKAI---DECAAAGGGTVLVPAGNYLVEPLFLKSNVRLH 100
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM-------LRDVVVTGD 152
LEK A ++ S + + D RY NG++ ++V +TG+
Sbjct: 101 LEKNATLVASTGENAYRATDST------------RYAEAENGWLPFISIADAQNVAITGE 148
Query: 153 NGTIDGQGSVWWD-WFSS-----QSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
GTIDGQG+VWW+ W ++ + RP L+ S V++ +T N+P++++
Sbjct: 149 -GTIDGQGAVWWERWRAAIRATGKKGGTDRPRLIYVTRSNRVLIDGVTLTNSPSFHVVMR 207
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y +V + + AP +P T I P S N+ I + +I D I++K+ + G
Sbjct: 208 YAHDVTVNGTHIIAPWHAPNTDAIDPIDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPNG 267
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
+++I +L+ G S+ GSE SGG++NV VE S+ GI ++ +G+GG +
Sbjct: 268 -VVDNIYIANNVLKQGRGISI--GSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEV 324
Query: 327 RQIVISDAELYNINVAFGACG----------------NCG------------SHPDDDFD 358
+ + + ++ V G G + P FD
Sbjct: 325 KNVTYRHTRMLDVEVPLVFSGYYQAAPIVQAEVDKLLQAGGFTLGEQIYPPDTEPAQPFD 384
Query: 359 PDALPAIDQITFKDIIGTNIT-IAGNFTGIQEAPFANICLSNISLSINPG 407
P Q+T D+ T + AG G+ EAP + + + G
Sbjct: 385 KVKTPHFSQVTIVDLESTGRSKAAGYIIGVPEAPLSGFHFEQVRIDAEKG 434
>gi|20451636|emb|CAC83614.1| putative polygalacturonase [Erwinia chrysanthemi]
Length = 457
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 178/410 (43%), Gaps = 63/410 (15%)
Query: 42 SITEFGAVGDGK--TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++T +GA G LNT +FQ AI A GG + VP+G +L L S++ L
Sbjct: 34 NVTRYGAEGHRLQIALNTESFQKAI---DECAAAGGGTVLVPAGNYLVEPLFLKSNVRLH 90
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM-------LRDVVVTGD 152
LEK A ++ S + + D RY NG++ ++V +TG+
Sbjct: 91 LEKNATLVASTGENAYRATDST------------RYAEAENGWLPFISIADAQNVAITGE 138
Query: 153 NGTIDGQGSVWWD-WFSS-----QSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
GTIDGQG+VWW+ W ++ + RP L+ S V++ +T N+P++++
Sbjct: 139 -GTIDGQGAVWWERWRAAIRATGKKGGTDRPRLIYVTRSNRVLIDGVTLTNSPSFHVVMR 197
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y +V + + AP +P T I P S N+ I + +I D I++K+ + G
Sbjct: 198 YAHDVTVNGTHIIAPWHAPNTDAIDPIDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPNG 257
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
+++I +L+ G S+ GSE SGG++NV VE S+ GI ++ +G+GG +
Sbjct: 258 -VVDNIYIANNVLKQGRGISI--GSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEV 314
Query: 327 RQIVISDAELYNINVAFGACG----------------NCG------------SHPDDDFD 358
+ + + ++ V G G + P FD
Sbjct: 315 KNVTYRHTRMLDVEVPLVFSGYYQAAPIVQAEVDKLLQAGGFTLGEQIYPPDTEPAQPFD 374
Query: 359 PDALPAIDQITFKDIIGTNIT-IAGNFTGIQEAPFANICLSNISLSINPG 407
P Q+T D+ T + AG G+ EAP + + + G
Sbjct: 375 KVKTPHFSQVTIVDLESTGRSKAAGYIIGVPEAPLSGFHFEQVRIDAEKG 424
>gi|192362237|ref|YP_001980696.1| polygalacturonase pga28A [Cellvibrio japonicus Ueda107]
gi|190688402|gb|ACE86080.1| polygalacturonase, putative, pga28A [Cellvibrio japonicus Ueda107]
Length = 489
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 175/412 (42%), Gaps = 67/412 (16%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ I +GA G T AF NA + + GG ++ V G +L+G +L S++ L
Sbjct: 70 KTFDIRAYGARAGGAIDATKAFANA---IAACHAAGGGKVLVSGGTYLSGPIHLLSNVNL 126
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+EKGA I +P + + + + G+EL G Y LI Y ++ +TG+ GT+DG
Sbjct: 127 HVEKGARIAFITDPKAY--LPAVFTRWEGMELMG--YSPLIYAYRQENIAITGE-GTLDG 181
Query: 159 QG--SVWWDW---------------FSSQSLNYS-----------------------RPH 178
Q + WW W F +Q RP
Sbjct: 182 QANRTTWWPWKGGAWKGGKNWSVPGFPTQDEGREQLQRAMEAGVAPEQRLFAEGANLRPP 241
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
V+ E V++ +T +N+P + ++PV C++V ++ ++ + P + G P+S D V
Sbjct: 242 FVQPYECERVLIEGVTIVNSPFWLLNPVLCNDVIVRGVTCDS--MGPNSDGCDPESCDRV 299
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
IEDC G D I++KSG + G RP+ ++ IR ++ G V GSEMSGG+
Sbjct: 300 LIEDCYFDTGDDCIAIKSGRNHDGRRINRPSQNIVIRNCHMRRGHG-GVVIGSEMSGGVR 358
Query: 299 NVQVEKIHLY--DSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFG-----ACGNCGS 351
NV VE + D G+ +T RGG + D + + A G+ G
Sbjct: 359 NVFVEHCEMNSPDLERGLRIKTNSVRGGVVENFFARDITIVEVKNAIVIDFQYEEGDAGE 418
Query: 352 HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
H P + I F+ I G + +P +N+ L N
Sbjct: 419 H---------TPIVRNIDFRGITCAKAERVFQVRGYERSPISNLALRNCDFK 461
>gi|227114428|ref|ZP_03828084.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 460
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 182/409 (44%), Gaps = 63/409 (15%)
Query: 43 ITEFGAVGDGK--TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+T++GA G LNT AFQ AI A GG ++VP G +L L S++ L L
Sbjct: 38 VTQYGAEGHRLQIALNTQAFQKAI---DDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLDL 94
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM-------LRDVVVTGDN 153
K A I+ S + + + +Y NG++ ++V +TG
Sbjct: 95 AKDATIVASTEEAAYRATEKT------------KYAEAENGWLPFISIADAQNVAITG-Q 141
Query: 154 GTIDGQGSVWWDWF------SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
GTIDGQG+VWW+ + + + RP L+ SS NV+V +T ++P++++ Y
Sbjct: 142 GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRY 201
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
+V + + +P +P T I P S N+ I + I D I++K+ + G
Sbjct: 202 SHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNG- 260
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
+++I +L+ G S+ GSE SGG++NV VE S+ GI +T +G+GG ++
Sbjct: 261 VVDNIYIANNILKQGRGISI--GSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVK 318
Query: 328 QIVISDAELYNINV--AFGA----------------------CGNCGSHPDDD----FDP 359
I + ++ ++ + F A G PD D FD
Sbjct: 319 NITYRNTKMVDVEIPLVFAAYYKAAPIVQAEVDKMLAEGGFTMGEQIYPPDTDPEQLFDQ 378
Query: 360 DALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLSINPG 407
P +T +++ T T A + G+ EAP + N+ + + G
Sbjct: 379 YKTPHFSNVTIENLESTGKTKAAAYIIGVPEAPLSGFHFDNVRIDADKG 427
>gi|402307012|ref|ZP_10826044.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
gi|400379233|gb|EJP32078.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
Length = 853
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 176/404 (43%), Gaps = 64/404 (15%)
Query: 27 QCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWL 86
Q ++P + R ++ IT +GA N + S KGG + VP+G W
Sbjct: 32 QSIERPVIANR--TILITAYGAKTSASAAQNQKAINRAIAVASM--KGGGSVVVPNGTWN 87
Query: 87 TGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRD 146
TG+ L SH+ L +E+GA + P D+ + + G+E Y I Y D
Sbjct: 88 TGAITLKSHVNLVVEEGATLHFVFEP---DLYPLVRTAWEGLEC--YNYSPCIYAYGATD 142
Query: 147 VVVTGDNGTIDGQGS--VWWDWFSSQSLNYS----------------------------- 175
+ V+G GTIDG GS WW W + Y
Sbjct: 143 IAVSG-KGTIDGGGSNDTWWAWNGNPRFGYKEGVTTESQRLGSRAQLQKYAEDGVPVEKR 201
Query: 176 --------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
RP L+ F+ E +++ ++ +N+P + IHP+ N+ + N+ + E P
Sbjct: 202 KFGKGCGLRPQLINFMHCERILIRDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNG 259
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV 287
G P++ +NV I++C G D I++KSG + G +G+P+ ++ IR ++ G V
Sbjct: 260 DGCDPEACENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCKMEDGHG-GV 318
Query: 288 AFGSEMSGGISNVQVEKIHLYDS---LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFG 344
GSE+SGG NV E ++ DS + +T RGG I+ I + NV G
Sbjct: 319 VIGSEISGGCENVYAEDCYM-DSPELERVLRIKTNNCRGGLIQNINMR-------NVKVG 370
Query: 345 ACGNCGSHPDDDFDP-DALPAIDQITFKDIIGTNITIAGNFTGI 387
C + D++P +A Q T +++ N+T + G+
Sbjct: 371 QCKEAVLKINLDYEPREACYRGFQPTVRNVNMENVTCGKSEYGV 414
>gi|255531066|ref|YP_003091438.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344050|gb|ACU03376.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 554
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 203/472 (43%), Gaps = 83/472 (17%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
+ +++I ++GA DG TLNT + AI +GG + +P G WLTG L S++
Sbjct: 42 KKDTINILKYGAKNDGITLNTKSINQAI---TDCNKRGGGVVVIPEGLWLTGPIELKSNV 98
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
L L+K A++ +++ + +V+ G LP R +S I +++ +TG G +
Sbjct: 99 NLHLKKNALLQFTKDMDQYPLVE-----GNWEGLPQMRNQSPIWASNQQNIAITG-YGIV 152
Query: 157 DGQGSVW------------WD---------------WF-SSQSL---------------- 172
DG G W W W+ S++SL
Sbjct: 153 DGGGEAWRMVKKDKLTESQWKSLLASGGVVGEDNKSWYPSAKSLKGAKMKNAGVITKDKD 212
Query: 173 --------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES 224
++ RP+L+ + V++ +TF N+PA+N+HP+ ++ I+N+ P +
Sbjct: 213 AAFYAEIKDFLRPNLLVLNRCKRVLLEGVTFQNSPAWNLHPLMSEDITIRNVYAKNPWYA 272
Query: 225 PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSG 284
G+ +S NV +E +G D I +KSG D G PT +V IR + + G
Sbjct: 273 QNGDGLDIESCKNVLVEGSTFDVGDDGICIKSGRDAEGRKRAMPTENVVIRHSTVYHAHG 332
Query: 285 SSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGG-----YIRQIVISD--AELY 337
V GSEMSGG N+ + + G+ F+TT+GRGG Y R I + D E
Sbjct: 333 GFV-IGSEMSGGAKNIFISDCTFIGTDIGLRFKTTRGRGGVVENIYARNINMKDIPGEAI 391
Query: 338 NINVAFGAC------GNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQE 389
++ + A G P + P + P + +++ A G+ E
Sbjct: 392 LFDMYYAAVDPVPLTGEKRETPKVELLPVTEETPVFRKFYISNVVCDGAAKAVFIRGLPE 451
Query: 390 APFANICLSNISLSINPG----SYNSWECSNIHGSSESVFPEPCPELENSSS 437
++I L N+++ G + SN+H ++ +P ++N SS
Sbjct: 452 MSISDIFLDNLTIKAKEGLDIQEAKNISLSNVHLDIKNA--KPLIYIQNGSS 501
>gi|315608643|ref|ZP_07883624.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315249682|gb|EFU29690.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 873
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 176/404 (43%), Gaps = 64/404 (15%)
Query: 27 QCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWL 86
Q ++P + R ++ IT +GA N + S KGG + VP+G W
Sbjct: 52 QSIERPVIANR--TILITAYGAKTSASAAQNQKAINRAIAVASM--KGGGSVVVPNGTWN 107
Query: 87 TGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRD 146
TG+ L SH+ L +E+GA + P D+ + + G+E Y I Y D
Sbjct: 108 TGAITLKSHVNLVVEEGATLHFVFEP---DLYPLVRTAWEGLEC--YNYSPCIYAYGATD 162
Query: 147 VVVTGDNGTIDGQGS--VWWDWFSSQSLNYS----------------------------- 175
+ V+G GTIDG GS WW W + Y
Sbjct: 163 IAVSG-KGTIDGGGSNDTWWAWNGNPRFGYKEGVTTESQRLGSRAQLQKYAEDGVPVEKR 221
Query: 176 --------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
RP L+ F+ E +++ ++ +N+P + IHP+ N+ + N+ + E P
Sbjct: 222 KFGKGRGLRPQLINFMHCERILIRDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNG 279
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV 287
G P++ +NV I++C G D I++KSG + G +G+P+ ++ IR ++ G V
Sbjct: 280 DGCDPEACENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCKMEDGHG-GV 338
Query: 288 AFGSEMSGGISNVQVEKIHLYDS---LNGIEFRTTKGRGGYIRQIVISDAELYNINVAFG 344
GSE+SGG NV E ++ DS + +T RGG I+ I + NV G
Sbjct: 339 VIGSEISGGCENVYAEDCYM-DSPELERVLRIKTNNCRGGLIQNINMR-------NVKVG 390
Query: 345 ACGNCGSHPDDDFDP-DALPAIDQITFKDIIGTNITIAGNFTGI 387
C + D++P +A Q T +++ N+T + G+
Sbjct: 391 QCKEAVLKINLDYEPREACYRGFQPTVRNVNMENVTCGKSEYGV 434
>gi|388258052|ref|ZP_10135230.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
gi|387938173|gb|EIK44726.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
Length = 513
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 190/408 (46%), Gaps = 63/408 (15%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++ ++FGA GDG T +T A Q AI + A K A L + G +LTGS L S++ L
Sbjct: 77 EINASDFGAKGDGTTDDTNALQKAI---DATAAKK-ATLVLQPGTYLTGSLFLKSNMALR 132
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGR------GIEL--PGRRYKSLINGYMLRDVVVTG 151
L+KG + G QN + SY R GIE+ P +L+N Y DV + G
Sbjct: 133 LDKGVTLTGKQN---------IESYPRQKTRIAGIEIVWPS----ALLNVYEQADVHIYG 179
Query: 152 DNGTIDGQGSVWWDWFSSQSLNYS-------------RPHLVEFISSENVVVSN-LTFLN 197
+ GTIDG G V+W F + Y RP L++ +S+ + + L
Sbjct: 180 E-GTIDGNGMVFWQTFWDKRNVYEGKGLRWAADYDAERPRLIQVYNSKRIELGGGLHMKR 238
Query: 198 APAYNIHPVYCSNVHIQNISVH--APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLK 255
A + + VY ++V + N+ + + + P T GI DSS +V +E I + DA+ LK
Sbjct: 239 AGFWTLQIVYSNDVKVSNVVIRNNSDGKGPSTDGIDIDSSHHVLVEKADIDVNDDALCLK 298
Query: 256 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL-NGI 314
+G D G+ RPT V IR +++ + + V FGSE SG I N+ V + + + +GI
Sbjct: 299 AGRDADGLRVNRPTEHVVIRDSIIRHAE-AGVTFGSETSGSIRNIDVYNLDVQGPVYSGI 357
Query: 315 EFRTTKGRGGYIRQIVISDAELYNINVAFGACGN---CGSHP---------DDDFDPDAL 362
F++ RGG + I I D ++ N A N S+P + + A
Sbjct: 358 FFKSAHVRGGTVSDIRIRDMKVQNAEAAVRVDLNWLPVYSYPVIPPGIKNVPEHWKILAT 417
Query: 363 PAIDQI---TFKDIIGTNITIAGN----FTGIQEAPFANICLSNISLS 403
P + +DI +NI N G EAP N+ SN+ ++
Sbjct: 418 PVPKEKGMPKLRDIHISNIKAEANAAFLMQGYAEAPLQNVHFSNMHIT 465
>gi|419957067|ref|ZP_14473133.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
gi|388607225|gb|EIM36429.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
Length = 430
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 155/321 (48%), Gaps = 33/321 (10%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
++SI GA + L+T A Q AI + + +P G++LTG+ L S ++L
Sbjct: 2 KAISILACGADPTAQRLSTSAIQQAINSAQE-----NDVIVIPQGRFLTGALFLKSGVSL 56
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
L+ GA ++GSQ+ + + +++ + GI++ R +IN +V +TG GTIDG
Sbjct: 57 RLDAGAQLVGSQDLADYPLINTRVA---GIDM--RWPAGIINIIDCENVSITG-TGTIDG 110
Query: 159 QGSVWWDWF-------------SSQSLNY------SRPHLVEFISSENVVVSNLTFLNAP 199
QG +WW F S++ L + RP + S+N+++ + T +
Sbjct: 111 QGVIWWQRFWGDDERSGMVGDYSARGLRWVVDYDCQRPRNILVFESQNILLRDFTSRESG 170
Query: 200 AYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWD 259
+NIH Y + ++ + + + P T GI DS + V IE CI++ D I +KSG
Sbjct: 171 FWNIHLCYSRRIAVEAVQI-SNSAGPSTDGIDVDSCEQVRIERCIVSCNDDNICIKSGRG 229
Query: 260 EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTT 319
R D+ IR L + GS + GSE SGGI V +E + G ++
Sbjct: 230 REAAQKARTARDIVIRGCTL--NKGSGITLGSETSGGIERVLIEDNAFNGTGVGFRIKSA 287
Query: 320 KGRGGYIRQIVISDAELYNIN 340
+ RGG+IR I + + L ++
Sbjct: 288 RNRGGFIRDITVQNLRLTDVR 308
>gi|109509140|gb|ABG34279.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 201
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 108/199 (54%), Gaps = 7/199 (3%)
Query: 258 WDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFR 317
WDEYGI+Y RP+T++ IR ++++S + ++ GSEMSGG+SNV VE + ++DS + +
Sbjct: 1 WDEYGISYKRPSTNILIRNLVVRSMVSAGISIGSEMSGGVSNVTVENLPVWDSRRAVRIK 60
Query: 318 TTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTN 377
T GRGGY++ I + N+ V + HPD+ +D A P + +I+F + G
Sbjct: 61 TAPGRGGYVQDITYRNITFENVRVGIVIKTDYNEHPDEGYDRKAFPILQRISFIGVHGQG 120
Query: 378 ITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSS-ESVFPEPCPEL---- 432
+ + G +E P N+ ++S+ + + ++C+ + G S+FP PC L
Sbjct: 121 VRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHIFQCAFVQGRVIGSIFPAPCENLDLYD 180
Query: 433 --ENSSSNSSSTCFSLIRY 449
EN S+S + I Y
Sbjct: 181 EQENLVKRSASQNITDIDY 199
>gi|50120129|ref|YP_049296.1| polygalacturonase [Pectobacterium atrosepticum SCRI1043]
gi|49610655|emb|CAG74100.1| putative polygalacturonase [Pectobacterium atrosepticum SCRI1043]
Length = 460
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 181/409 (44%), Gaps = 63/409 (15%)
Query: 43 ITEFGAVGDGK--TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+T++GA G LNT AFQ AI A GG ++VP G +L L S++ L L
Sbjct: 38 VTQYGAEGHRLQIALNTEAFQKAI---DDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLDL 94
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM-------LRDVVVTGDN 153
K A I+ S + + + +Y NG++ ++V +TG
Sbjct: 95 AKDATIVASTEVAAYRATEKT------------KYAEAENGWLPFISIADAQNVAITG-Q 141
Query: 154 GTIDGQGSVWWDWF------SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
GTIDGQG+VWW+ + + + RP L+ SS NV+V +T ++P++++ Y
Sbjct: 142 GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRY 201
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
+V + + +P +P T I P S N+ I + I D I++K+ + G
Sbjct: 202 SHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNG- 260
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
+++I +L+ G S+ GSE SGG++NV VE S+ GI +T +G+GG ++
Sbjct: 261 VVDNIYIANNILKQGRGISI--GSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVK 318
Query: 328 QIVISDAELYNINV--AFGACGNCG--------------------------SHPDDDFDP 359
I + ++ ++ + F A + P+ FD
Sbjct: 319 NITYRNTKMVDVEIPLVFAAYYKAAPIVQAEVDKMLAEGGFTMGEQIYPPDTDPEQPFDQ 378
Query: 360 DALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLSINPG 407
P +T +++ T T A + G+ EAP + N+ + + G
Sbjct: 379 YKTPHFSNVTIENLESTGKTKAAAYIIGVPEAPLSGFHFDNVRIDADKG 427
>gi|372276037|ref|ZP_09512073.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 430
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 37/324 (11%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
++I +F AV D +L+T A Q AI S A+ G + +P+G++LTG+ L S +TL L
Sbjct: 4 INIIDFDAVPDATSLSTQAIQRAI---DSAAE--GDTVLIPAGRFLTGALFLKSKMTLEL 58
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIEL--PGRRYKSLINGYMLRDVVVTGDNGTIDG 158
K AV+LGSQ + + + GI++ P +++N R+V V G +GT+DG
Sbjct: 59 AKDAVLLGSQQLEDYP---EIATRVAGIDMVWP----TAMLNINQCRNVTVCG-SGTLDG 110
Query: 159 QGSVWWDWF-------------SSQSLNY------SRPHLVEFISSENVVVSNLTFLNAP 199
QG+VWW F + + L + RP + SE V + + T ++
Sbjct: 111 QGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDFTSKDSG 170
Query: 200 AYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWD 259
+N+H Y V++Q ++V + T GI DSS V +E C ++ D I +KSG
Sbjct: 171 FWNLHVCYSKQVNLQRLNVMNATGTS-TDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRG 229
Query: 260 EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTT 319
R D+ IR L SG + GSE SGGI NV +E + G ++
Sbjct: 230 AEAQQLARTARDIIIRDCTLLKGSG--ITLGSETSGGIENVIIEHNRFSGTGVGFRIKSA 287
Query: 320 KGRGGYIRQIVISDAELYNINVAF 343
+ RGG+I+ I++ + ++ F
Sbjct: 288 RNRGGWIKNIIVRHLIMEDVGYPF 311
>gi|403252174|ref|ZP_10918484.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
gi|402812187|gb|EJX26666.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
Length = 446
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 176/405 (43%), Gaps = 67/405 (16%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
V++ +FGA GD +T + +F+ AI + + +GG +L VP G +LTG +L S++ L
Sbjct: 24 REVNLLDFGARGDRRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLKSNIEL 80
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ KG + + VV L + GIEL Y L+ +V +TG +G +DG
Sbjct: 81 HV-KGTIKFIPDPERYLPVV--LTRF-EGIELYN--YSPLVYALDCENVAITG-SGVLDG 133
Query: 159 QG--SVWWDWFSSQSL----------------------------------NYSRPHLVEF 182
WW W + +Y RP V+F
Sbjct: 134 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
NV+V + +N+P + +HPV NV I+NI + + P GI P+S + IE
Sbjct: 194 YRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEK 251
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR-RVLLQSSSGSSVAFGSEMSGGISNVQ 301
C G D++ +KSG D G G P+ + +R +++ +S + GSEMSGG+ NV
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 302 VEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD-------AELYNINVAFGACGNCGSHPD 354
+ + +T RGGY+ I D E+ IN+ +
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAMNVSEEVIRINLRY----------- 360
Query: 355 DDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
D+ + + LP + + K++ T A G++ +I +S+
Sbjct: 361 DNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISD 405
>gi|238917515|ref|YP_002931032.1| glycoside hydrolase family 28 [Eubacterium eligens ATCC 27750]
gi|238872875|gb|ACR72585.1| Glycoside Hydrolase Family 28 [Eubacterium eligens ATCC 27750]
Length = 518
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 177/389 (45%), Gaps = 34/389 (8%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++++ EFGA GDG+ +T A Q AI A +++ VP G + S L +L L
Sbjct: 81 TLNVREFGAYGDGEHDDTNAIQCAIM-----AAPKDSRVLVPEGVYKISSIFLKDNLNLE 135
Query: 100 LEKGAVILGSQN-------PSHWDVVDPLPSYGRGIEL--PGRRYKSLINGYMLRDVVVT 150
L KGAV+ P + D Y G P + +++ G +V +T
Sbjct: 136 LAKGAVLSAFTEREKFPILPGQIETYDEKDYYNLGTWEGNPLDMFSAIVCGINCSNVTIT 195
Query: 151 GDNGTIDG--QGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
G+ GTIDG WW ++ + RP L + NV + +T N+P++ IHP +
Sbjct: 196 GE-GTIDGCTTHDNWWKNCKIRNTAW-RPRLFFINNCSNVTMHGITVQNSPSWTIHPYFS 253
Query: 209 SNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRP 268
++ ++ + P S T G+ P+S +V + I++G D I++KSG P
Sbjct: 254 KHLKFIDVKILNPANSHNTDGLDPESCQDVLVLGTYISVGDDCIAIKSGKIYMAQKEKTP 313
Query: 269 TTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYI 326
T D+ +R+ ++ G +V GSE++ G+ +V + ++ G+ +T +GRG +
Sbjct: 314 TEDMTVRQCCMRDGHG-AVTVGSEIAAGVKDVHIRDCMFMNTDRGLRVKTRRGRGKLSVL 372
Query: 327 RQIVISDAELYNINVAF-----------GACGNCGSHPDDDFDPDALPAIDQITFKDIIG 375
I + ++ N+ F G GS D D P+I +TFKDI
Sbjct: 373 DDISFENIDMDNVMTPFVVNSFYFCDPDGKTEYVGSRKPLPVD-DRTPSIKSLTFKDINA 431
Query: 376 TNITIAGNFT-GIQEAPFANICLSNISLS 403
N +AG + G+ E+ + NI+ S
Sbjct: 432 KNCHVAGAYIFGLPESKVEKLTFENINFS 460
>gi|253687486|ref|YP_003016676.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754064|gb|ACT12140.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 460
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 182/409 (44%), Gaps = 63/409 (15%)
Query: 43 ITEFGAVGDGK--TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+T++GA G LNT AFQ AI A GG ++VP G +L L S++ L L
Sbjct: 38 VTQYGAEGHRLQIALNTEAFQKAI---DDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLDL 94
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM-------LRDVVVTGDN 153
K A I+ S + + + +Y NG++ ++V +TG
Sbjct: 95 AKDATIVASTEIAAYRATEKT------------KYAEAENGWLPFISIADAQNVAITG-Q 141
Query: 154 GTIDGQGSVWWDWF------SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
GTIDGQG+VWW+ + + + RP L+ SS NV+V +T ++P+++I Y
Sbjct: 142 GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHIVMRY 201
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
+V + + +P +P T I P S N+ I + I D I++K+ + G
Sbjct: 202 SHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNG- 260
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
+++I +L+ G S+ GSE SGG++NV VE S+ GI +T +G+GG ++
Sbjct: 261 VVDNIYIANNILKQGRGISI--GSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVK 318
Query: 328 QIVISDAELYNINV--AFGA----------------------CGNCGSHPDDD----FDP 359
I + ++ ++ + F A G PD D FD
Sbjct: 319 NITYRNTKMVDVEIPLVFAAYYKAAPIVQAEVDKMLAEGGFTMGEQIYPPDTDPAQPFDQ 378
Query: 360 DALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLSINPG 407
P +T +++ T T A + G+ EAP + N+ + + G
Sbjct: 379 YKTPHFSNVTIENLESTGKTKAAAYIIGVPEAPLSGFHFDNVRIDADKG 427
>gi|197105922|ref|YP_002131299.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479342|gb|ACG78870.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 470
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 155/344 (45%), Gaps = 58/344 (16%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT+FGA G+ ++ AF A + + GG ++ VP G WLTG +L S++ L ++K
Sbjct: 50 ITDFGADGEAVADSSEAFARA---IAACHAAGGGRVVVPPGWWLTGPIHLKSNVNLHVQK 106
Query: 103 GAVILGSQNPSHWDVVDPLP---SYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
GA IL +P + LP + G+EL Y + + ++ VTG+ G +DGQ
Sbjct: 107 GATILFKTDPKAY-----LPLVFTRWEGVELMN--YSPFVYAFEQENIAVTGE-GVLDGQ 158
Query: 160 GSV--WWDWFSSQSLN-------------------------------------YSRPHLV 180
S WW W N Y RP +
Sbjct: 159 CSREHWWTWKGPWKQNQHGWAEGMPNQRPARARLFQMAEDRTPVEQRVFGEGSYLRPPFI 218
Query: 181 EFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCI 240
+ NV++ ++ +P + +HPV C NV I+ + +++ P GI P+S D+V I
Sbjct: 219 QPYRCTNVLIEGVSLRRSPFWQVHPVLCRNVTIRRLDINS--HGPNNDGIDPESCDHVLI 276
Query: 241 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 300
EDC + G D I+L SG +E G G P +V IR + G + GS++SG + NV
Sbjct: 277 EDCFFSTGDDCIALNSGRNEDGRRVGVPCQNVVIRGCRMADGHG-GLTIGSQISGHVRNV 335
Query: 301 QVEKIHL--YDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA 342
E L D + I F+ RGG + ++ + E+ + A
Sbjct: 336 FAENCRLDSPDLDHAIRFKNNALRGGIVERVRYRNLEVGQVRRA 379
>gi|336429336|ref|ZP_08609303.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002947|gb|EGN33044.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 521
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 187/388 (48%), Gaps = 37/388 (9%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+++ +FGA G+G+ +T+ Q AI A ++ +P GK+ S L S+ L L
Sbjct: 83 LNVRDFGASGEGERDDTVFIQAAIM-----ACPPEGRVVIPPGKYRVTSLFLKSNSNLEL 137
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRG---IEL------PGRRYKSLINGYMLRDVVVTG 151
E+GAV++ P ++ L S G+G + L Y +L G +V + G
Sbjct: 138 EEGAVLIYDGRPGRLPILPGLLS-GKGENSLALGSWEGEAADMYAALFTGCGAENVNLYG 196
Query: 152 DNGTIDGQGSVWWDWFSSQSLNYS--RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
G I G G+ DW+S ++ S RP ++ +++ V L F P++ IHP +CS
Sbjct: 197 -KGEILG-GASMEDWWSEENRQSSPHRPRMLFLTHCKHIRVQGLRFSMCPSWCIHPCFCS 254
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
++ I ++ + P +SP T GI P+S ++V I C ++G D I++KSG P
Sbjct: 255 DLGIYDVEIINPEDSPNTDGINPESCEHVEIAGCHFSLGDDCIAIKSGKGRRAQENPVPG 314
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGG--YIR 327
+ + IR+ +++ G V GSE+S G+ +V V ++ G+ +T +GRG +
Sbjct: 315 SHIQIRQCFMENGHG-GVTIGSEISSGVHHVTVRDCCFRNTDRGLRIKTRRGRGKSCVVD 373
Query: 328 QIVISDAELYNINVAFGACGNC--GSHPDDDFD----PDALPA------IDQITFKDIIG 375
++ + + ++ F NC PD D +ALPA + ++ F+ I
Sbjct: 374 AVLFENIHMEQVDTPFVL--NCFYFCEPDGRSDYVQTKEALPADERTPNMGELVFRHIYC 431
Query: 376 TNITIAGN-FTGIQEAPFANICLSNISL 402
T+ IA F G+ E ++ + ++ +
Sbjct: 432 TDCHIAAAFFYGLPEKKIKSVIMEDVRI 459
>gi|302672206|ref|YP_003832166.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
gi|302396679|gb|ADL35584.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
Length = 519
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 169/337 (50%), Gaps = 45/337 (13%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R V+ + + A+GDGKTLNT A Q A+ D+ + ++ P G +LTG+ N+ S+
Sbjct: 94 RKIDVTTSPYNALGDGKTLNTAALQKAL----DDCDEN-SIVFFPKGTYLTGALNVHSNS 148
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLIN--------GYMLRDVV 148
++LE+GA++ G+++P+ D + + S G E+ Y+SL+N G+ +V+
Sbjct: 149 EIYLEEGALLQGTEDPA--DYLPKIHSRFEGYEMEC--YRSLLNLGELDHSSGFNCENVI 204
Query: 149 VTGDNGTIDG-----------QGSVWWDWFSS---QSLNYSRP---------HLVEFISS 185
+ G+ + G +G D+ +S + Y +P L+ +
Sbjct: 205 IRGEGSIMGGGAALAKSIARIEGERLRDYIASLGDKIKEYEKPETIASRFRGRLINMSNC 264
Query: 186 ENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT-VGIVPDSSDNVCIEDCI 244
+N+ + LT AP++NIH +Y + + ++ + E + G PDSS N + C
Sbjct: 265 QNIWIHGLTLGFAPSWNIHFIYSDQIVTDHCTLKS--EGVWNGDGWDPDSSTNSTLYACD 322
Query: 245 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 304
D++++KSG + G RPT HIR + G + GSEMSGG+ +V++
Sbjct: 323 FYTEDDSVAIKSGKNPEGNVINRPTK--HIRVFDSVTHFGHGLCIGSEMSGGVEDVRLWD 380
Query: 305 IHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINV 341
+ + +GIE + TK RGGY+R I++ D +I +
Sbjct: 381 CQMGPTWSGIEIKATKKRGGYVRNILVRDITASHIQM 417
>gi|359452816|ref|ZP_09242155.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
gi|358050136|dbj|GAA78404.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
Length = 489
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 189/412 (45%), Gaps = 73/412 (17%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+ +I +FGA GD KT NT+A NAI KS +GG Q+ +P G+++TG+ +L S++ L
Sbjct: 62 TFNIIDFGANGDNKTNNTVAINNAI---KSCNAQGGGQVIIPQGQFITGAIHLLSNVNLH 118
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
LE+GA++ S +P D + + + G+E+ G Y LI + ++ +TG G ++G
Sbjct: 119 LEEGAILSFSTSPE--DYLPAVFTRWEGLEMMG--YSPLIYAFEQENIAITG-KGILEGN 173
Query: 160 G--SVWWDWFSSQSL-----------------------------------------NYSR 176
+ WW W Y R
Sbjct: 174 ANNTTWWPWKGKHKEAHWELLTDNNGQIIEQKTARDKLMRDAEQHIPVEQRIYADGAYLR 233
Query: 177 PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSD 236
P ++ NV++ +T N+P + ++PV C++V + +++ + P + G P+S +
Sbjct: 234 PPFIQPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCDVTFSS--HGPNSDGCDPESCN 291
Query: 237 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 296
+V I++C+ G D I++KSG + G + ++ I ++ G V GSE+SGG
Sbjct: 292 HVHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENCHMKEGHG-GVVIGSEISGG 350
Query: 297 ISNVQVEKIHLYDS---LNGIEFRTTKGRGGYIRQIVISDAELYNINVA-----FGACGN 348
++NV V+ + DS I +T RGG I I I + E+ + A + G+
Sbjct: 351 VNNVFVQNCTM-DSPHLERAIRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVINFYYEEGD 409
Query: 349 CGSHPDDDFDPDALP-AIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
G FDP ID + K+++ + + G P +I L+N
Sbjct: 410 AGQ-----FDPIVRDIKIDNLHCKNVLSKALYL----NGFARDPIKDITLTN 452
>gi|224536297|ref|ZP_03676836.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522091|gb|EEF91196.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
Length = 473
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 181/408 (44%), Gaps = 47/408 (11%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++T++GA GD ++NT+A Q AI + GG + G +LTGS + +++ L +
Sbjct: 48 NVTDYGAKGDALSMNTMAIQKAI---DAAEQAGGGIVVFHPGIYLTGSLFVGNNVNLHIS 104
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
KG ++GSQ+ + +D + G +E P +LIN ++ ++GD G I+G+G
Sbjct: 105 KGVTLIGSQDIGDYKKIDTRVA-GIEMEWP----SALINIIGKKNAAISGD-GVINGRGK 158
Query: 162 VWWDWFSSQSLNYS-------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
V+WD + + +Y RP + ENV V ++ +++H +Y
Sbjct: 159 VFWDKYWNMREDYEAKGLRWIVDYDCERPRGILIAECENVTVRDIVLYQPGFWSLHILYS 218
Query: 209 SNVHIQNISVHAPPES--PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
++ I I + E P T GI DSS+ + +++ I D LK+G D G+
Sbjct: 219 KHITIDGIIISNNIEGHGPSTDGIDIDSSEYILVQNANINCNDDNFCLKAGRDSDGLRVN 278
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
RP V IR + S G GSE SGGI N+ ++ + G+ F++T RGG I
Sbjct: 279 RPCQYVVIRDCV-AGSGGGMFTCGSETSGGIRNIVAYRMKGVGTKCGLRFKSTCQRGGVI 337
Query: 327 RQIVISDAELYNINVAFGACGNCG-----SHPDDDFDPDALP----------AIDQ---- 367
I + D E+ + F N S +D + +P +++Q
Sbjct: 338 EDIYLYDIEMIGVERPFVVDLNWNPAYSISKLPKGYDMEKIPVYWSKMLESVSLEQGTPV 397
Query: 368 ---ITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSW 412
+T ++ +N N GI + N L N+ + N W
Sbjct: 398 FRNVTLDNVTASNARTCMNVVGIANSKIENFILRNVCIEGNKAGKIIW 445
>gi|334124103|ref|ZP_08498112.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
gi|333389102|gb|EGK60268.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
Length = 430
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 33/321 (10%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
++SI GA + L+T A Q AI + + +P G++LTG+ L S ++L
Sbjct: 2 KAISILACGADPTAQRLSTSAIQQAIDNAQQ-----NDVIVIPPGRFLTGALFLKSGVSL 56
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
L+ GA ++GSQ+ + + +++ + GI++ R +IN +V +TG GTIDG
Sbjct: 57 HLDAGAQLVGSQDLADYPLINTRVA---GIDM--RWPAGIINIIECENVSITG-TGTIDG 110
Query: 159 QGSVWWDWF-------------SSQSLNY------SRPHLVEFISSENVVVSNLTFLNAP 199
QG++WW F S++ L + RP + S+ +++ + T +
Sbjct: 111 QGAIWWQRFWGDDERSGMVEDYSARGLRWVVDYDCQRPRNILIFESQTILLRDFTSRESG 170
Query: 200 AYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWD 259
+N+H Y ++ ++ + + + P T GI DS + V +E CI++ D I +KSG
Sbjct: 171 FWNMHLCYSRHIEVEGVQI-SNSAGPSTDGIDIDSCEQVRVERCIVSCNDDNICIKSGRG 229
Query: 260 EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTT 319
R D+ IR L + GS + GSE SGGI V +E + G ++
Sbjct: 230 YEAAQKARTARDIVIRGCTL--NKGSGITLGSETSGGIERVLIEDNAFNGTGVGFRIKSA 287
Query: 320 KGRGGYIRQIVISDAELYNIN 340
+ RGG+IR I++ + L ++
Sbjct: 288 RNRGGFIRDIIVQNLRLTDVR 308
>gi|225872229|ref|YP_002753684.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
gi|225792218|gb|ACO32308.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
Length = 468
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 154/313 (49%), Gaps = 26/313 (8%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++ +GA GDG TL+T + L + A KG A + G + TG+ + S TL
Sbjct: 29 AIRANAYGAKGDGITLDT---RAIQAALDAAAKKGPATVTFAPGTYRTGALFVKSGTTLR 85
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
+ G + +++ ++ + G + P ++IN Y DV +TG +GT+DG
Sbjct: 86 IGAGVTLRAVHGLANYPLIKTRVA-GIDMHWPA----AVINVYRQHDVHITG-SGTVDGN 139
Query: 160 GSVWWDWFSSQSLNY-------------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
G WWD + + Y RP L+EF S++V ++ L L +P + +H
Sbjct: 140 GKYWWDGYWALRKQYDLRGLRWAADYDDRRPRLIEFYQSQHVSLAGLHLLRSPFWTVHIC 199
Query: 207 YCSNVHIQNISVH--APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIA 264
Y + VH+ I++ P T G+ DSS +V +E I++ DA+ LK+G D G+
Sbjct: 200 YSAYVHVDGITIRNNIGGRGPSTDGVDIDSSRHVLVEHADISVNDDALCLKAGRDSDGLR 259
Query: 265 YGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL-NGIEFRTTKGRG 323
+P D+ IR ++ + ++ GSE SGG NV V IH + + +G+ F++ RG
Sbjct: 260 VNKPDVDIVIRNCTVRYGA-AAFTIGSETSGGFRNVDVYNIHALEHVPSGVLFKSAHTRG 318
Query: 324 GYIRQIVISDAEL 336
G+ I I D +L
Sbjct: 319 GWADNIRIHDFQL 331
>gi|383641178|ref|ZP_09953584.1| glycoside hydrolase [Sphingomonas elodea ATCC 31461]
Length = 465
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 177/406 (43%), Gaps = 65/406 (16%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
+T FGA GDG+TLN+ A AI + ++ VP+G++LTG+ +L S++ L L+
Sbjct: 48 VTRFGARGDGQTLNSTAIARAIAACAAAGG---GRVVVPAGRFLTGAVHLRSNVNLHLQA 104
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
GA +L S +P + +V + GIEL Y L+ R++ +TG+ GT+DGQGS
Sbjct: 105 GATLLFSTDPKDYPLVF---TRWEGIELMN--YSPLVYARQQRNIAITGE-GTLDGQGSA 158
Query: 163 --WWDW----------------------------FSSQSL----------NYSRPHLVEF 182
WW W + + + ++ RP V+
Sbjct: 159 RHWWSWKGPWGGTVDHGWREGMPDQRKARAILFEMAERRVPVEKRVFGEGSFLRPAFVQP 218
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
ENV++ + AP + IHPV C N+ ++ + V P G P+S D IE
Sbjct: 219 YDCENVLIEGVKLRGAPFWQIHPVLCRNLIVRGVDVLG--HGPNNDGCDPESVDGALIER 276
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQV 302
C G D I++ SG +E G P ++ IR ++ G V GS++SGG +
Sbjct: 277 CTFDTGDDCIAINSGRNEDGRRLAMPAQNILIRDCRMKEGHG-GVVVGSQISGGARWIFA 335
Query: 303 EKIHLY--DSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
E+ + D I F+ RGG + D ++ ++ A C D +++
Sbjct: 336 ERCVMDSPDLWYAIRFKNNALRGGLLENFFYRDIDVGTVSRAAVTC-------DFNYEEG 388
Query: 361 A----LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 402
A +P + + + + N + G+ AP + L + S
Sbjct: 389 ANGRFVPRLRNVVIERLRTKNAARVLDSQGLPGAPVTGVTLRDCSF 434
>gi|383155085|gb|AFG59707.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
Query: 241 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 300
EDC ++ G D I++KSGWDEYGI++ RP++++ +RR+ + S+ S +A GSEMSGGI ++
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITI-STPFSGIAIGSEMSGGIRDI 59
Query: 301 QVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
VE I +Y S GI +T GRGG IR I S L N+ GN G HPD ++P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 361 ALPAIDQITFKDIIGTNI 378
ALP + I +++G++I
Sbjct: 120 ALPVVGDIAVLNVVGSSI 137
>gi|196228364|ref|ZP_03127231.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196227767|gb|EDY22270.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 456
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 165/370 (44%), Gaps = 49/370 (13%)
Query: 9 LLLALCSAILINGEVSDGQCDDQPTLDPR--PHSVSITEFGAVGDGKTLNTLAFQNAIFY 66
+ +A CS E S+ Q P SIT+FGA + + T A AI
Sbjct: 15 IAIAACSCRAAEIETSESQAILAQIRSPEFPARDFSITDFGASPNADS--TEAIAKAITA 72
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
+ GG ++ +P+G WLTG+ +L ++ L L K A + P+ + V L Y
Sbjct: 73 CHA---AGGGRVTIPAGVWLTGAVHLLGNVDLHLAKEATLRFVPEPAKYLPV-VLTRY-E 127
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WWDWFS---------------- 168
GIE Y L+ + +V +TG GT+DG S WW W
Sbjct: 128 GIEC--MNYSPLVYAFEQENVAITG-AGTLDGSASSQNWWAWNERAPDKPALQAADRKQL 184
Query: 169 ----------SQSL----NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
+Q + ++ RP +E +NV++ +T +N+P + IHP C+NV ++
Sbjct: 185 DQQGADGTPVAQRIFGAGHFLRPSFIEPYRCKNVLIEGVTIVNSPMWEIHPTLCTNVTVR 244
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
++VH+ + G P+S +V IEDC G D I++KSG + G G ++ I
Sbjct: 245 GVTVHSLGTN--NDGCDPESCHDVLIEDCTFQTGDDCIAIKSGRNNDGRRVGVAAENIII 302
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL--NGIEFRTTKGRGGYIRQIVIS 332
RR ++ G V GSE+SGG+ NV V + F++ RGG I I +S
Sbjct: 303 RRCTMKDGHG-GVTIGSEVSGGVRNVFVSDCQMDSPRLDRAFRFKSNAVRGGEIENIQVS 361
Query: 333 DAELYNINVA 342
++ + A
Sbjct: 362 QVKIGRVARA 371
>gi|383642336|ref|ZP_09954742.1| glycoside hydrolase family 28 [Sphingomonas elodea ATCC 31461]
Length = 489
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 180/411 (43%), Gaps = 58/411 (14%)
Query: 42 SITEFGAV-GDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
ITEFGA GD ++ + + ++ G + VP+G WL+G +L S++ L L
Sbjct: 59 QITEFGARPGDKQSTSIAIARAI----RAANAAGSGSVIVPAGIWLSGKIHLESNVNLHL 114
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+GA++ S +P D + P+ + GIE Y LI + +V +TG G I+
Sbjct: 115 ARGAILRFSDDPQ--DYLPPVQTSWEGIECFN--YSPLIYAFDCENVAITGP-GRIEPVL 169
Query: 161 SVWWDWFSSQSL---------------------------NYSRPHLVEFISSENVVVSNL 193
W W + L N RPHL++F NV+V ++
Sbjct: 170 DRWKIWSARPKLHMDALVALYDMAYRNVPVADRQMAIGQNNLRPHLIQFNRCRNVLVEDI 229
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+ +P + +HP+ C +V I+ +S+ A + G+ P+ S NV IEDC+ G DA+S
Sbjct: 230 SIRGSPFWTLHPLLCRDVTIRRVSIQAHGHN--NDGVDPEMSQNVLIEDCVFDQGDDAVS 287
Query: 254 LKSGWDEYGIAYGRPTTDVHIR--RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL 311
+KSG D P +V +R RVL + +A GSE+SGGI N+ V+ H
Sbjct: 288 VKSGRDMDAWRLATPCRNVVVRNCRVL---NGHQLMAVGSELSGGIENIWVDDCHFVGDG 344
Query: 312 NG-----------IEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP- 359
G + +T + RGGY+R + +S + + A + P
Sbjct: 345 RGGDDHAVPINNLLYVKTNERRGGYVRNVHMSRVTATTLAGSVLAVETDVLYQWRTLLPT 404
Query: 360 --DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGS 408
L AI+++ D+ G ++ P ++ LS + + G+
Sbjct: 405 YVRRLTAIERLRVSDVHVQQAQSVAVIKGERDLPIQDVRLSRVRVERVSGT 455
>gi|356566220|ref|XP_003551332.1| PREDICTED: uncharacterized protein LOC100780755 [Glycine max]
Length = 366
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 90/142 (63%), Gaps = 1/142 (0%)
Query: 22 EVSDG-QCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYV 80
+V++G C + P ++ R HS +T+FG VGDGKT NT FQ AI L +A GGA L V
Sbjct: 119 KVANGLDCFEYPAINCRKHSAVLTDFGGVGDGKTSNTKGFQYAISNLSHYASDGGALLVV 178
Query: 81 PSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLIN 140
P GKWLTGSFNLTSH TLFL+K A ILGSQ+ S W + LPSYGRG + P + +I
Sbjct: 179 PPGKWLTGSFNLTSHFTLFLQKEATILGSQDESKWPTLPVLPSYGRGRDAPYGQGDIIIQ 238
Query: 141 GYMLRDVVVTGDNGTIDGQGSV 162
G + + + + ID + SV
Sbjct: 239 GLTILAPIDSPNTDGIDLEDSV 260
>gi|372223095|ref|ZP_09501516.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 472
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 190/418 (45%), Gaps = 75/418 (17%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
+ ++ ++GAV DG LNT A AI K+ GG ++ +P+GK++TG +L ++
Sbjct: 51 KNQEFNVMDYGAVADGSVLNTEAIAEAI---KACNAAGGGKVVLPAGKYVTGPIHLLDNV 107
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLP--SYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
L + +GA +L + + S + PL SY G EL + LI +++ +TG G
Sbjct: 108 NLEIAEGAEVLFTTDKSLF----PLAHTSY-EGTEL--MNFSPLIYAKDKKNIAITGK-G 159
Query: 155 TIDGQGS--VWWDWFSSQSLNYS-----------------------------------RP 177
++GQ + WW W + ++ RP
Sbjct: 160 VLNGQANNGNWWPWCGNTKYGWAEGDPKQHSSLKKLKEDMSEKGVPVADRIFGMGEFLRP 219
Query: 178 HLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDN 237
+E ENV++ ++T +NAP + +HP+ +NV + I+V + P G P+ + N
Sbjct: 220 TFIEPFGCENVLIKDITIINAPFWVVHPIKSNNVVVDGITVDS--HGPNNDGCDPEYAKN 277
Query: 238 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 297
V I++C+ G D I++KSG +E G P+ ++ + + G V GSE+S G+
Sbjct: 278 VWIKNCVFNTGDDCIAIKSGRNEDGRRVNIPSENIVVEDCKMIDGHG-GVVMGSEISAGV 336
Query: 298 SNVQVEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISD-------AELYNINVAFGACG 347
NV V+ + DS N I +T RGG++ + + + + IN+ +G G
Sbjct: 337 RNVFVQNCQM-DSPNLDRAIRIKTNTKRGGFVENVYVRNINVGQVKEAVLKINLHYGIYG 395
Query: 348 -NCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLS 403
GS +P + + ++I N G G +E+P N+ L N+++
Sbjct: 396 VQKGSF---------MPKVSNVYLENIAVDNGGKYGVLVNGYEESPVKNVFLKNVTIK 444
>gi|421725056|ref|ZP_16164257.1| glycoside hydrolase [Klebsiella oxytoca M5al]
gi|410374138|gb|EKP28818.1| glycoside hydrolase [Klebsiella oxytoca M5al]
Length = 460
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 182/409 (44%), Gaps = 63/409 (15%)
Query: 43 ITEFGAVGDGK--TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
IT +GA G LNT A Q AI A GG + VP G +LT L +++ L L
Sbjct: 38 ITHYGAEGHRLQIALNTDAIQKAI---DDCAAAGGGTVRVPKGNFLTNPLFLKNNIQLKL 94
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM-------LRDVVVTGDN 153
EK A ++ S + + RG + RY NG++ ++V + G+
Sbjct: 95 EKDATLVASTEEAAY----------RGDD--KTRYAEAENGWLPFISIADAQNVAIVGE- 141
Query: 154 GTIDGQGSVWWDWF------SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
GTIDGQG+VWW+ + + + RP L+ + NV++ +T ++P++++ Y
Sbjct: 142 GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFHVVTRY 201
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
+V I + +P +P T I P S N+ I + I D I++K+ + G
Sbjct: 202 AHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDG- 260
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
+++I L+ G S+ GSE +GG++NV+VE S+ GI ++ +G+GG ++
Sbjct: 261 VVDNIYIANNTLKQGRGISI--GSESAGGVNNVRVENNTFEGSMYGIRIKSPRGKGGEVK 318
Query: 328 QIVISDAELYNINV--AFGACGNCG--------------------------SHPDDDFDP 359
IV + ++N+ V F A S P FD
Sbjct: 319 NIVYRNTRMHNVEVPLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDK 378
Query: 360 DALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLSINPG 407
P IT +++ T + A + G EAP + SN+++ + G
Sbjct: 379 YKTPHFSNITVENLTSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRG 427
>gi|407791858|ref|ZP_11138936.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
gi|407198911|gb|EKE68937.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
Length = 495
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 182/401 (45%), Gaps = 56/401 (13%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
I++FGAV GK LN+ + + A GG ++ VP G++LTG+ +L S++ L L+K
Sbjct: 75 ISDFGAVPGGKVLNS---DAIAAAIAACAAAGGGRVRVPQGRFLTGAIHLKSNVNLHLDK 131
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG-- 160
GAV++ S NP H+ + + + G+E+ G LI Y R++ VTG G +DG
Sbjct: 132 GAVLVFSPNPDHY--LPAVFTRWEGMEMMG--LSPLIYAYGQRNIAVTG-QGVLDGGADD 186
Query: 161 SVWWDW------------------------FSSQSL-------------NYSRPHLVEFI 183
+ WW W + L ++ RP ++
Sbjct: 187 NTWWPWKGPHPEGHWRQDPIAQTQKAARDKLQQEVLAGTDPRTRLHGQGSFLRPAFIQPY 246
Query: 184 SSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDC 243
+NV++ +T +N+P + +HPV C +V ++ ++ + P G P+ D+V IE C
Sbjct: 247 LCQNVLIEGVTLVNSPFWLLHPVLCQSVTVRGVTCRS--HGPNNDGCDPECCDHVVIEGC 304
Query: 244 IIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVE 303
G D I++KSG +E G G+ ++ +R ++ G V GSE+SGG+ NV ++
Sbjct: 305 TFDTGDDCIAIKSGRNEDGRRVGQACRNLVVRNCQMKDGHGGLV-LGSEISGGVYNVFLD 363
Query: 304 KIHLY--DSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDA 361
+ + +T RGG I I I + + + A + ++ +
Sbjct: 364 NCQMDSPELERAFRIKTNARRGGTIEGIRIRNLRVGEVKDAV----SINFFYEEGQEGRF 419
Query: 362 LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 402
LP + I +++ + A G AP + LSN +
Sbjct: 420 LPEVRDIHIDNLVVRSAQRAFYLRGFASAPIEGVTLSNCRI 460
>gi|329957312|ref|ZP_08297832.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523025|gb|EGF50128.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 452
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 184/398 (46%), Gaps = 54/398 (13%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW-LTGSFNLTSHLTLFLE 101
+TE+GA D + A AI + GG + +P+G + + G+ L S++ L +
Sbjct: 53 VTEYGAKDDTAFDSRPAILKAINQCNT---DGGGTVLIPAGNYFIKGAITLKSNINLHIA 109
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
+GA + S + D + + + G E Y I Y +V VTG GTIDG GS
Sbjct: 110 EGARLEFSTEAA--DYLPMVLTKWEGTEC--FNYSPFIYAYQCTNVAVTG-KGTIDGNGS 164
Query: 162 VWW-DWFSSQ-----------------------SLNYSRPHLVEFISSENVVVSNLTFLN 197
V + DW + Q +Y RP +++F +NV+V +L +
Sbjct: 165 VTFNDWHAIQGPAVDRLRQMGIDSVPVYERVFGEGHYLRPCMIQFYGCKNVLVEDLKIYD 224
Query: 198 APAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSG 257
+P + IHPV+C NV ++N+ + + + G P+SS NV IE +G D I++KSG
Sbjct: 225 SPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESSTNVLIEGMDFNVGDDGIAIKSG 282
Query: 258 WDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFR 317
D+ G G+ T +V IR + ++ GSEMSGG+ N+ +E + NGI F+
Sbjct: 283 RDQDGWRIGQATENVIIRNCHF---ARWAITIGSEMSGGVRNIYIEDCKIDSCRNGIYFK 339
Query: 318 TTKGRGGYIRQI----VISDAELYN-INVAFGACG-NCGSHPDDDFDPDALPAIDQITFK 371
+ RGGY + + +D L+ IN G G+HP I +
Sbjct: 340 SNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYRGGNHP---------TLFRNICIE 390
Query: 372 DIIGTNI-TIAGNFTGIQEAPFANICLSNISLSINPGS 408
D+ + ++A G+ EA +I L NI++ P +
Sbjct: 391 DVTCNRVDSVALMANGLPEAKLYDITLRNITVKKAPKA 428
>gi|146311767|ref|YP_001176841.1| glycoside hydrolase family protein [Enterobacter sp. 638]
gi|145318643|gb|ABP60790.1| glycoside hydrolase, family 28 [Enterobacter sp. 638]
Length = 460
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 181/410 (44%), Gaps = 63/410 (15%)
Query: 42 SITEFGAVGDGK--TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+IT++GA G LNT A Q AI A GG + VP G +LT L S++ L
Sbjct: 37 NITQYGAEGHRLQIALNTEAIQKAI---DDCAAAGGGTVLVPKGNFLTNPLFLKSNIQLK 93
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM-------LRDVVVTGD 152
LEK A ++ S + + D +Y NG++ ++V + G+
Sbjct: 94 LEKDATLVASTEVAAYRADDK------------SKYAEAENGWLPFISIADAQNVAIVGE 141
Query: 153 NGTIDGQGSVWWDWF------SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
GTIDGQG+VWW+ + + + RP L+ S NV++ +T ++P++++
Sbjct: 142 -GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYITRSHNVLIDGVTLTHSPSFHVVTR 200
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y +V I + +P +P T I P S N+ I + I D I++K+ + G
Sbjct: 201 YAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDG 260
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
+++I L+ G S+ GSE +GG++NV VE S+ GI ++ +G+GG +
Sbjct: 261 -VVDNIYIANNTLKQGRGISI--GSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEV 317
Query: 327 RQIVISDAELYNINV--AFGACGNCG--------------------------SHPDDDFD 358
+ IV + +++N+ V F A S P FD
Sbjct: 318 KNIVYRNTKMHNVEVPLVFSAYYKAAPIVEAEVEKLLKEGGFTLGEQIYPPDSDPKQPFD 377
Query: 359 PDALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLSINPG 407
P IT +++ T + A + G EAP + +N+++ G
Sbjct: 378 KYKTPHFSNITVENLTSTGDSKAAAYIIGTPEAPLSGFHFTNVNIEAAQG 427
>gi|315650888|ref|ZP_07903931.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315486867|gb|EFU77206.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 360
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 153/286 (53%), Gaps = 19/286 (6%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+++ +FGA GDG ++++ Q A+ + K G +Y+P G++L L S++ L++
Sbjct: 83 LNVKDFGAAGDGVKIDSVCIQAAV----NACPKDGT-VYIPKGRYLCTPVFLKSNIDLWI 137
Query: 101 EKGAVILGSQNPSHWDVV-------DPLPSYGRGIEL--PGRRYKSLINGYMLRDVVVTG 151
+K AV++G ++ + ++ D Y G P + +LI G + +V++ G
Sbjct: 138 DKDAVLIGEKDRKKYPILPGMIESSDEKNEYNIGSWEGNPLDCFAALITGLSVENVLIYG 197
Query: 152 DNGTIDGQGSV--WWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
+ G +DG + WW +++ + RP+ V + +N+ + L +N+P++ +HP Y
Sbjct: 198 E-GILDGNAGMLDWWKDAKKKNIAW-RPNTVFLHNCKNIAMQGLCIMNSPSWTLHPYYSD 255
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
N+ N ++ P SP T G+ P+S +NV I I++G D I++KSG + + +P
Sbjct: 256 NLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCIAIKSGKYYMALRHYKPA 315
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 315
++ IR + + G SV GSE++ G+ +V VE ++L G+E
Sbjct: 316 KNIVIRNSIFRKGHG-SVTIGSEVAAGVYDVSVENVYLKGRTEGLE 360
>gi|383155083|gb|AFG59706.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155087|gb|AFG59708.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155089|gb|AFG59709.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155091|gb|AFG59710.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Query: 241 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 300
EDC ++ G D I++KSGWDEYGI++ RP++++ +RR+ + S+ S +A GSE SGGI ++
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITI-STPFSGIAIGSETSGGIRDI 59
Query: 301 QVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
VE I +Y S GI +T GRGG IR I S L N+ GN G HPD ++P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 361 ALPAIDQITFKDIIGTNI 378
ALP + I D++G++I
Sbjct: 120 ALPVVGDIAVLDVVGSSI 137
>gi|116619804|ref|YP_821960.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222966|gb|ABJ81675.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 177/418 (42%), Gaps = 77/418 (18%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I ++GA DG T AF+ AI K+ GG +YVP G++ +G L S++TL ++
Sbjct: 32 NIADYGAKKDGSAPATDAFRQAIQAAKA---AGGGTIYVPPGRYTSGPIELFSNMTLDID 88
Query: 102 KGAVI--------------LGSQNPSHWDV-----VDPLPSYGRGIELPG---------- 132
GA + LG + + + V+ + GRGI G
Sbjct: 89 AGARVEFPVAELPFTRGRYLGVETLTPMPLIGGTGVENVTVTGRGILTTGDYEAWRKAYP 148
Query: 133 ---RRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYS-------------R 176
+ Y L NG V+ TG + G W + R
Sbjct: 149 AAYQEYLKLHNG-----VISTGGSEAFSANGPRWDHLLKVLETGHRASEEEYRLAAAELR 203
Query: 177 PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSD 236
P + F++++NV+V ++ + AP + +H +Y N ++N+ + P P+ IV DSS
Sbjct: 204 PSFICFMNAKNVLVEDVRIIGAPMFVVHLLYTENATVRNVMIQTYP-GPHANAIVADSSR 262
Query: 237 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 296
V I D I G D I LKSG D GI RPT V I + + G +V GSE +G
Sbjct: 263 FVHISDSYIDTGDDGIVLKSGKDADGIRVNRPTEHVTITNCTVHHAHG-AVVIGSETAGS 321
Query: 297 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA--------FGACGN 348
I +V I D+ NGI ++ +GRGG + + + + N+ G +
Sbjct: 322 IRDVVASNITAIDTENGIRIKSRRGRGGTVDDLRFDNWTMENVGTGIVVTSYYVMGGESD 381
Query: 349 CGSHPDDDFDPDALPAIDQITFKDIIGTNITIAG-----NFTGIQEAPFANICLSNIS 401
P + P F++I +N+TI G + G+ E P + L++++
Sbjct: 382 TKEEPVSERTPK---------FRNIGISNVTIHGAKKVVDIDGLPEMPITGLRLTDVA 430
>gi|358066336|ref|ZP_09152863.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
gi|356695387|gb|EHI57019.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
Length = 539
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 186/391 (47%), Gaps = 36/391 (9%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++++ +FGA GDG +T Q AI ++ VP G + S L L L
Sbjct: 101 TLNVRDFGAKGDGVQDDTGFIQAAIMCCPK-----NGRVLVPEGIYRVSSLFLKDDLRLE 155
Query: 100 LEKGAVILGSQNPSHWDVVDPL-PSYGRGIEL--------PGRRYKSLINGYMLRDVVVT 150
+ KGAV+ + + + V+ L SY E P + ++I G +++VV+
Sbjct: 156 IGKGAVLSAFTDRTKFPVLKGLIDSYDEKEEYNLGSWEGNPLDMFSAIITGINVKNVVLY 215
Query: 151 GDNGTIDGQGSVWWD--WFSSQSLNYS-RPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
G G I+G D W++++ + RP ++ E+VVV + N+P++NIHP +
Sbjct: 216 G-QGLIEGNAGYEEDNWWYNAKVRRIAFRPRMIFLNHCEHVVVQGIRVQNSPSWNIHPYF 274
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
+++ +++V P +SP T G+ P+S +V I ++G D I++KSG G Y
Sbjct: 275 SNHLRFLDLTVLNPKDSPNTDGLDPESCKDVEIAGVYFSLGDDCIAIKSGKIYMGAKYRV 334
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GY 325
P+ D+ IR+ ++ G S+ GSEM+GG+ ++ V+ + G+ +T +GRG
Sbjct: 335 PSEDIVIRQCCMRDGHG-SITIGSEMAGGVKHLTVKDCLFLHTDRGLRIKTRRGRGEAAV 393
Query: 326 IRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDAL------------PAIDQITFKDI 373
I I+ + ++ F NC + D D + + P + ++ F++I
Sbjct: 394 IDGILFEHIRMDHVMTPF--VINCFYYCDPDGHSEYVATKEMLPIDERTPYVKELVFRNI 451
Query: 374 IGTNITIAGNFT-GIQEAPFANICLSNISLS 403
+N +A + G+ E + + +I ++
Sbjct: 452 EASNCHVAAAYLYGLPEQKIDRVEMEHIHVT 482
>gi|414071001|ref|ZP_11406978.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
gi|410806622|gb|EKS12611.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
Length = 489
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 189/412 (45%), Gaps = 73/412 (17%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+ +I +FGA G+ KT NT+A NAI KS +GG Q+ +P G+++TG+ +L S++ L
Sbjct: 62 TFNIIDFGANGNNKTNNTVAINNAI---KSCNAQGGGQVIIPQGQFITGAIHLLSNVNLH 118
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ 159
LE+GA++ S +P D + + + G+E+ G Y LI + ++ +TG G ++G
Sbjct: 119 LEEGAILSFSTSPE--DYLPAVFTRWEGLEMMG--YSPLIYAFEQENIAITG-KGILEGN 173
Query: 160 G--SVWWDWFSSQSL-----------------------------------------NYSR 176
+ WW W Y R
Sbjct: 174 ANNTTWWPWKGKHKEAHWELLTDNNGQIIEQKTARDKLMRDAEQHIPVEQRIYADGAYLR 233
Query: 177 PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSD 236
P ++ NV++ +T N+P + ++PV C++V + +++ + P + G P+S +
Sbjct: 234 PPFIQPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCDVTFSS--HGPNSDGCDPESCN 291
Query: 237 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 296
+V I++C+ G D I++KSG + G + ++ I ++ G V GSE+SGG
Sbjct: 292 HVHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENCHMKEGHG-GVVIGSEISGG 350
Query: 297 ISNVQVEKIHLYDS---LNGIEFRTTKGRGGYIRQIVISDAELYNINVA-----FGACGN 348
++NV V+ + DS I +T RGG I I I + E+ + A + G+
Sbjct: 351 VNNVFVQNCTM-DSPHLERAIRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVINFYYEEGD 409
Query: 349 CGSHPDDDFDPDALP-AIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
G FDP ID + K+++ + + G P +I L+N
Sbjct: 410 AGQ-----FDPIVRDIKIDNLHCKNVLSKALYL----NGFARDPIKDITLTN 452
>gi|297817564|ref|XP_002876665.1| hypothetical protein ARALYDRAFT_907788 [Arabidopsis lyrata subsp.
lyrata]
gi|297322503|gb|EFH52924.1| hypothetical protein ARALYDRAFT_907788 [Arabidopsis lyrata subsp.
lyrata]
Length = 131
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 68/73 (93%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RPHSVSITEFGAVGDG TLNT AFQNA+FYL SF+DKGGA+L+VP+G+WLTGSF+L SHL
Sbjct: 40 RPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHL 99
Query: 97 TLFLEKGAVILGS 109
TL+L+KGA ILGS
Sbjct: 100 TLWLDKGATILGS 112
>gi|423106873|ref|ZP_17094568.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
gi|376388999|gb|EHT01691.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
Length = 460
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 182/409 (44%), Gaps = 63/409 (15%)
Query: 43 ITEFGAVGDGK--TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
IT +GA G LNT A Q AI A GG + VP G +LT L +++ L L
Sbjct: 38 ITHYGAEGHRLQIALNTDAIQKAI---DDCAAAGGGTVLVPKGNFLTNPLFLKNNIQLKL 94
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM-------LRDVVVTGDN 153
EK A ++ S + + RG + RY NG++ ++V + G+
Sbjct: 95 EKDATLVASTEVAAY----------RGDD--KTRYAEAENGWLPFISIADAQNVAIVGE- 141
Query: 154 GTIDGQGSVWWDWF------SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
GTIDGQG+VWW+ + + + RP L+ + NV++ +T ++P++++ Y
Sbjct: 142 GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFHVVTRY 201
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
+V I + +P +P T I P S N+ I + I D I++K+ + G
Sbjct: 202 AHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDGV 261
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
+++I L+ G S+ GSE +GG++NV VE S+ GI ++ +G+GG ++
Sbjct: 262 -VDNIYIANNTLKQGRGISI--GSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVK 318
Query: 328 QIVISDAELYNINV--AFGACGNCG--------------------------SHPDDDFDP 359
IV S+ ++N+ V F A S P FD
Sbjct: 319 NIVYSNTRMHNVEVPLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDK 378
Query: 360 DALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLSINPG 407
P IT +++ T + A + G EAP + SN+++ + G
Sbjct: 379 YKTPHFSNITVENLTSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRG 427
>gi|281423599|ref|ZP_06254512.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
gi|281402419|gb|EFB33250.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
Length = 856
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 165/375 (44%), Gaps = 67/375 (17%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTL-NTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTG 88
+QP + R +V IT+FGA + N A AI YL A +GG ++ VP+GKW TG
Sbjct: 35 EQPKIAER--TVVITKFGAKTTASAVQNQQAIHRAIAYL---AKQGGGKVVVPAGKWQTG 89
Query: 89 SFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVV 148
+ L S + L + K A++ + S + +V + G+ Y I Y DVV
Sbjct: 90 ALRLASGIELVVSKDALLQFVFDRSLYPLV---KTSWEGMMCWN--YSPCIYSYGADDVV 144
Query: 149 VTGDNGTIDGQGS--VWWDWFSSQSLNYS------------------------------- 175
V+G+ GTIDG GS WW Q Y
Sbjct: 145 VSGE-GTIDGGGSNETWWPMCGKQVFGYVKGVTKEAQVSGSRRRLQQFAEDDVPWDERRF 203
Query: 176 ------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVG 229
RP L+ F+ V VS +T L++P + IHP+ C NV + + + E P G
Sbjct: 204 GLGQGLRPQLINFVKGNRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDG 261
Query: 230 IVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAF 289
P++ +NV I++ G D I++KSG + G + +P+ ++ IR +++ G +
Sbjct: 262 CDPEACENVLIQNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNCVMEDGHG-GIVI 320
Query: 290 GSEMSGGISNVQVEKIHL----YDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGA 345
GSE+SGG NV E + D + + +T RGG I I + V G
Sbjct: 321 GSEISGGCKNVYAEDCTMDSPHLDRV--LRIKTNNCRGGRIENINMR-------RVKVGQ 371
Query: 346 CGNCGSHPDDDFDPD 360
C + D++P+
Sbjct: 372 CKEAVVKINLDYEPE 386
>gi|225420387|ref|ZP_03762690.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
gi|225040964|gb|EEG51210.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
Length = 519
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 182/400 (45%), Gaps = 36/400 (9%)
Query: 33 TLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNL 92
T +P ++++ +FGA GDG +TLA Q+AI A ++ +P+G++ L
Sbjct: 74 TTEPESVTLNVRDFGAAGDGIKDDTLAIQSAIM-----ACPPQGRVLIPAGRYSFVCLFL 128
Query: 93 TSHLTLFLEKGAVILGSQN-------PSHWDVVDPLPSYGRGIEL--PGRRYKSLINGYM 143
+ L LEKGA + + P D Y G P + + LI G
Sbjct: 129 KDGINLELEKGAELSAVTDRERFPFYPGMVPYTDQTGDYCLGTWEGDPQKMFCGLITGVH 188
Query: 144 LRDVVVTGDNGTIDGQGSV--WWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAY 201
+++V + G+ GT++G S WW + + RP V EN+ + LT N+P++
Sbjct: 189 VKNVNIYGE-GTLNGNASHENWWHNCKEMKIAW-RPRAVFLNGCENISLVGLTVKNSPSW 246
Query: 202 NIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEY 261
IHP + +++ ++V AP +S T G+ P+S V + ++G D I++KSG
Sbjct: 247 TIHPYFSNHLRFLGLNVLAPKDSHNTDGLDPESCRQVELAGIHFSVGDDCIAVKSGKIYM 306
Query: 262 GIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKG 321
G Y P+ + IR+ + G SV GSE+ G+ ++ V D+ G+ +T +G
Sbjct: 307 GKTYRTPSEHITIRQCSMNDGHG-SVVIGSEIGAGVRDLTVRDCIFKDTDRGLRIKTRRG 365
Query: 322 RGG--YIRQIVISDAELYNINVAFGACGNCGSHPDDD--------FDP----DALPAIDQ 367
RG + ++ + + + F NC D D +P + P+I +
Sbjct: 366 RGEDCVVDRVAFENIRMDGVLTPFVV--NCFYFCDPDGRTEYVQSKEPLPVDERTPSIQE 423
Query: 368 ITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLSINP 406
++FKDI N A G+ E ++ NIS+S P
Sbjct: 424 LSFKDIHAENAHYAAVCAYGLPEQKIGHLIFENISVSYAP 463
>gi|18400876|ref|NP_566524.1| polygalacturonase [Arabidopsis thaliana]
gi|75311636|sp|Q9LW07.1|PGLR3_ARATH RecName: Full=Probable polygalacturonase At3g15720; Short=PG;
AltName: Full=Pectinase At3g15720; Flags: Precursor
gi|11994344|dbj|BAB02303.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332642197|gb|AEE75718.1| polygalacturonase [Arabidopsis thaliana]
Length = 456
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 193/426 (45%), Gaps = 58/426 (13%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+++ +T+FGAVGDG T ++ AF A + + G Q VP+G +T L
Sbjct: 22 NALDVTQFGAVGDGVTDDSQAFLKA--WEAVCSGTGDGQFVVPAG--------MTFMLQP 71
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYML----RDVVVTGDNG 154
+G+ P ++ L + +G +K + ++L +V+ GD G
Sbjct: 72 LKFQGSC---KSTPVFVQMLGKLVAPSKG------NWKGDKDQWILFTDIEGLVIEGD-G 121
Query: 155 TIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
I+GQGS WW+ SRP ++F S N+ +S LT L++P +IH C+ V I
Sbjct: 122 EINGQGSSWWE------HKGSRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTIS 175
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
++ ++AP SP T GI +S NV I+DCIIA G D I++ SG T+++HI
Sbjct: 176 SLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSG-----------TSNIHI 224
Query: 275 RRVLLQSSSGSSVAFGSEMSGG----ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIV 330
+ G ++ GS G + NV V+ + ++NG +T +G GY R I
Sbjct: 225 SGI--DCGPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMIT 282
Query: 331 ISDAELYNIN--VAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAG-NFTGI 387
+ L N+ + N G + + + ++ F + IGT+ + G +F
Sbjct: 283 FNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDFRCS 342
Query: 388 QEAPFANICLSNISL---SINPGSYNSWECSNIHGSSESVFPE-PCPELENSSSNSS--- 440
+ P I L ++ + S G +C N+ G+S P C EL +S+
Sbjct: 343 ERVPCTEIFLRDMKIETASSGSGQVAQGQCLNVRGASTIAVPGLECLELSTDMFSSAQLL 402
Query: 441 -STCFS 445
TC S
Sbjct: 403 EQTCMS 408
>gi|295095844|emb|CBK84934.1| Endopolygalacturonase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 430
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 155/321 (48%), Gaps = 33/321 (10%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
++SI GA + L+T A Q AI + + +P G++LTG+ L S ++L
Sbjct: 2 KAISILACGADPTAQRLSTSAIQQAINSAQQ-----NDVIVIPQGRFLTGALFLKSGVSL 56
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
L+ GA ++GSQ+ + + +++ + GI++ R +IN +V +TG GTIDG
Sbjct: 57 RLDAGAQLVGSQDLADYPLINTRVA---GIDM--RWPAGIINIIDCENVSITG-TGTIDG 110
Query: 159 QGSVWWDWF-------------SSQSLNY------SRPHLVEFISSENVVVSNLTFLNAP 199
QG +WW F S++ L + RP + S+++++ + T +
Sbjct: 111 QGVIWWQRFWGDDERSGMVGDYSARGLRWVVDYDCQRPRNILVFESQSILLRDFTSRESG 170
Query: 200 AYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWD 259
+N+H Y + ++ + + + P T GI DS + V +E CI++ D I +KSG
Sbjct: 171 FWNMHLCYSRRITVEGVQI-SNSAGPSTDGIDIDSCEQVRVERCIVSCNDDNICIKSGRG 229
Query: 260 EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTT 319
R D+ IR L + GS + GSE SGGI V +E + G ++
Sbjct: 230 REAAQKARTARDIVIRGCTL--NKGSGITLGSETSGGIERVLIEDNAFNGTGVGFRIKSA 287
Query: 320 KGRGGYIRQIVISDAELYNIN 340
+ RGG+IR I + + L ++
Sbjct: 288 RNRGGFIRDITVQNLHLTDVR 308
>gi|340348164|ref|ZP_08671257.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433652999|ref|YP_007296853.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339607813|gb|EGQ12738.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433303532|gb|AGB29347.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 857
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 176/402 (43%), Gaps = 66/402 (16%)
Query: 39 HSVSITEFGA-VGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLT 97
IT+FGA V N A AI + + +GG ++ VP G+WLTG+ L S +
Sbjct: 43 REYRITDFGASVRATAARNQKAINRAI---ATCSRQGGGRVVVPRGEWLTGAIRLQSRVN 99
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
L +E+GA + + +P+ + +V + G+E Y I Y DV +TG GT+D
Sbjct: 100 LVVEEGATLEFAFDPALYPLV---KTSWEGLECWN--YSPCIYAYQATDVGLTG-RGTVD 153
Query: 158 GQGS--VWW-------------DWFSSQSLNYS------------------------RPH 178
G GS WW +QSL RP
Sbjct: 154 GNGSRDTWWPMCGAAKYGFVAGQTKEAQSLGARAQLLKMAEDGVPADERRFGMGRGLRPQ 213
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
LV F + + ++V LT N+P + IHP+ +N+ + ++V + P G P++ NV
Sbjct: 214 LVNFNACDGILVEGLTLANSPFWVIHPLLSTNITVDGVTV--TNDGPNGDGCDPEACSNV 271
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
I++C G D I++KSG + G + RP+ ++ IR ++ G V GSE+SGG
Sbjct: 272 LIQNCTFDTGDDCIAIKSGRNNDGRLWNRPSENIIIRHCKMKDGHG-GVVIGSEISGGCR 330
Query: 299 NVQVEKIHL----YDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPD 354
NV E H+ D + + +T RGG I I + NV G C +
Sbjct: 331 NVFAEDCHMDSPHLDRV--LRIKTNNCRGGVIENINMR-------NVTVGQCNEAVLRIN 381
Query: 355 DDFDP-DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
D++P + + T + + N+T + G+Q NI
Sbjct: 382 LDYEPREQCYRGFEPTVRRVYMENVTSRESKYGVQIIGLNNI 423
>gi|212694769|ref|ZP_03302897.1| hypothetical protein BACDOR_04302 [Bacteroides dorei DSM 17855]
gi|345516118|ref|ZP_08795611.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|423227933|ref|ZP_17214339.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|423239066|ref|ZP_17220182.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
gi|423243193|ref|ZP_17224269.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|212662623|gb|EEB23197.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|345455530|gb|EEO44191.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|392637680|gb|EIY31546.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|392646068|gb|EIY39787.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|392647477|gb|EIY41178.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
Length = 465
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 175/400 (43%), Gaps = 43/400 (10%)
Query: 31 QPTLDPRPHS-VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWL-TG 88
Q T RP +S+ FGA GDGK AF A +K A GGA + VP+G++L G
Sbjct: 40 QITGAVRPKKQISLISFGAKGDGKKDCKPAFDKA---MKRAAHMGGAHIVVPAGEYLLNG 96
Query: 89 SFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVV 148
+ S++ L L++GA + S P+ + + + + G L + Y I GY L +V
Sbjct: 97 PIHFVSNVCLELQEGATLKFSSEPAFY--LPLVKTSWEGTFL--QNYSPFIYGYQLENVS 152
Query: 149 VTGDNGTIDGQ-GSVWWDWFSSQSLN-----------------------YSRPHLVEFIS 184
+ G G IDG G+ + W S Q + + RPHLV+F
Sbjct: 153 IIG-KGVIDGNAGTTFATWKSKQKIGQQLSREMNHKEVPVAERNFGEGYWLRPHLVQFFD 211
Query: 185 SENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCI 244
+N+ + ++ NAP + IH + N+ + I A + GI P+ + N+ IE+
Sbjct: 212 CKNITIEDVFITNAPFWCIHLLKSENIICRGIRYDAKLVN--NDGIDPEYTRNLLIENIE 269
Query: 245 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 304
G D +++K G D G P+ ++ IR + G V GSEMS GI +V VE
Sbjct: 270 FNNGDDNVAIKCGRDNDGWKTSCPSENIIIRNCKFKGLHG--VVLGSEMSSGIQHVFVEN 327
Query: 305 IHLYDSLN-GIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALP 363
GI +T RGG+IR I +++ E + F + + D
Sbjct: 328 CTYGGYCKRGIFIKTNPDRGGFIRDIYVNNCEFGEVEDLFYV---TSMYAGEGMDNHHFT 384
Query: 364 AIDQITFKDIIGTNITIAG-NFTGIQEAPFANICLSNISL 402
+ I KD+ + +A G + P N+ N+ +
Sbjct: 385 EVHDIYVKDLKCKKVNVAALVLQGTEAKPIYNVTFDNVDV 424
>gi|198276929|ref|ZP_03209460.1| hypothetical protein BACPLE_03134 [Bacteroides plebeius DSM 17135]
gi|198270454|gb|EDY94724.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 461
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 177/392 (45%), Gaps = 45/392 (11%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT++GA LNT AF AI ++ GG ++ VP+G+W TG +L SH+ LFLE+
Sbjct: 38 ITKYGARKGNNHLNTQAFAKAI---EACNRAGGGRVVVPAGEWFTGPIHLKSHVNLFLEE 94
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GAV+ S NP+ D LP+ E L Y LI + +V ++G GT+
Sbjct: 95 GAVVRFSDNPN-----DYLPAVMTSWEGLECYNYSPLIYAFECENVGISG-KGTLAPVMD 148
Query: 162 VWWDWFS---------------------------SQSLNYSRPHLVEFISSENVVVSNLT 194
W WF ++ N+ RPHL+ F +N+++ +
Sbjct: 149 TWRTWFKRPEAHLNALRQLYSMGSTDVPVKQRQMAKGENHLRPHLIHFNRCKNILLEDFH 208
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
+P + IH C++ ++++ V A + GI + S N IE+C G DA+ +
Sbjct: 209 IRQSPFWTIHLYLCNSGVVRHLDVQAHGHN--NDGIDLEMSRNFLIENCKFDQGDDAVVI 266
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
K+G ++ P+ ++ +R + + + + GSE+SGG+ N+ + + +++ +
Sbjct: 267 KAGRNQDAWRLNTPSENIVVRDCDILNGH-TLLGIGSEISGGVRNIYMTRCKAPQNVHRL 325
Query: 315 EF-RTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP---DALPAIDQITF 370
F +T RGG+I I + D E ++ F + + D P + ID I
Sbjct: 326 FFLKTNHRRGGFIENIYLEDIEAGDMLRTFEVDTDV-LYQWKDLVPTYETRITRIDGIHV 384
Query: 371 KDIIGTNITIAGNFTGIQEAPFANICLSNISL 402
K+I + G P N+ + N+ +
Sbjct: 385 KNIHCQSADAIYELKGDARLPIRNVFVENVKV 416
>gi|300770985|ref|ZP_07080862.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762258|gb|EFK59077.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 481
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 192/438 (43%), Gaps = 56/438 (12%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V +FGA DGKT++T A Q AI + A KGG ++ GK+LTGS + S + L +
Sbjct: 53 VYANDFGAREDGKTISTKAIQQAI---DACAKKGGGKVQFRPGKYLTGSVFIKSGVFLHV 109
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIEL--PGRRYKSLINGYMLRDVVVTGDNGTIDG 158
++G +LGSQ+ + ++ + GIE+ P +L+N + ++G G I+G
Sbjct: 110 DEGVELLGSQSLEDYPQINTRVA---GIEMIWPA----ALVNINGQQKAGISG-KGIING 161
Query: 159 QGSVWWD--W-----FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAYNIHP 205
QG +WD W + + L + RP V SE++++ ++T A + +H
Sbjct: 162 QGKPFWDAYWKLRSEYDKKGLRWIVDYDAQRPRTVIVDGSEDIIIRDVTLKQAGFWTVHL 221
Query: 206 VYCSNVHIQNISVHAPPES--PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGI 263
+Y S V + I + P T GI DSS + I++ I D +KSG D G+
Sbjct: 222 LYSSYVTVDGIIIKNNINGIGPSTDGIDIDSSKWIRIQNADIDCNDDNFCIKSGRDWDGL 281
Query: 264 AYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG 323
RPT V I + + G + FGSE SGG+ ++ + + + GI ++ + RG
Sbjct: 282 RVNRPTEYVLITDCISRKGDGL-ITFGSETSGGMRHIIARNLKAHGTKVGIRLKSARNRG 340
Query: 324 GYIRQIVISDAELYNINVAFGACGNCG------------------SHPDDDFDP-----D 360
G + I++ + ++ ++ AF N H P
Sbjct: 341 GVVEDILLENIQMDSVRTAFEVTPNWNPSYSYSKLPAGYDINKVPEHWKKMVTPVEPASK 400
Query: 361 ALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSY----NSWECSN 416
+P I K++ A N G+QE P L N++++ +W+ N
Sbjct: 401 GIPTFQNIQIKNVFVKFAQRAINVDGLQENPLQKFSLENVAITAKTAGVIRHAKNWQLKN 460
Query: 417 IHGSSESVFPEPCPELEN 434
+ +++ + EN
Sbjct: 461 VKVTAQDGTKVVLEDTEN 478
>gi|300728229|ref|ZP_07061597.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774464|gb|EFI71088.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 856
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 158/347 (45%), Gaps = 63/347 (18%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFA-DKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+T++GA + + A Q AI + + A KGG + +P G + TG+ + SH+ L +E
Sbjct: 47 VTKYGA---SEKASAAANQKAINRVIAMASKKGGGNVIIPKGTYSTGAITMLSHVNLVVE 103
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
+GA + + P + +V + G L Y I Y D+ +TG GTIDG GS
Sbjct: 104 EGATLHFAFEPKLYPLVR---TSWEG--LACWNYSPCIYAYKATDIAITG-KGTIDGGGS 157
Query: 162 --VWWDWFSSQSLNYS-------------------------------------RPHLVEF 182
WW + Y RP L+ F
Sbjct: 158 NDTWWPMNGNPKFGYKPGITKESQKLGSRAKLMKMAENDVPFDERKFGMGQGLRPQLINF 217
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
+ SEN+++ ++T L +P + IHP+ C N+ + + + E P G P++ +NV I++
Sbjct: 218 VRSENILIKDVTLLRSPFWVIHPLLCKNITVDGVQIWN--EGPNGDGCDPEACENVIIQN 275
Query: 243 CIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQV 302
+ G D I++KSG + G +G+P+ ++ IR ++ G V GSE+SGG NV
Sbjct: 276 TLFHTGDDCIAIKSGRNNDGRFWGKPSKNIIIRNCKMEDGHG-GVVIGSEISGGCENVYA 334
Query: 303 EKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC 346
E ++ DS N + +T RGG I+ I + NV G C
Sbjct: 335 ENCYM-DSPNLERVLRIKTNNCRGGLIQNINMR-------NVKVGQC 373
>gi|397691596|ref|YP_006528850.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395813088|gb|AFN75837.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 463
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 166/369 (44%), Gaps = 49/369 (13%)
Query: 74 GGAQLYVPSGKW-LTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPG 132
GG ++ +P G + G + S++ L LEK AV+L S NP D + + + G+E
Sbjct: 78 GGGKIIIPEGVYKCNGPIHFKSNINLHLEKNAVVLFSTNPK--DYLPVVFTRWEGVEC-- 133
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQGS--VWWDW-----------------------F 167
Y LI G+ + +V +TG+ G DG S WW W
Sbjct: 134 YNYSPLIYGFEVDNVAITGE-GVFDGMASDENWWKWKGRKNPKDDETQNNPNSRPRLFEM 192
Query: 168 SSQSL----------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNIS 217
++Q + +Y RP+ V+F S+N+++ +TF N+P + +HPV N+ I+N+
Sbjct: 193 NNQDVPVDKRVFGEGHYLRPNFVQFYKSKNILIEGVTFKNSPMWFLHPVLSENIIIRNVK 252
Query: 218 VHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRV 277
P G P+S NV IE C G D I++KSG + G P+ ++ IR
Sbjct: 253 TIG--HGPNNDGCDPESCKNVLIEGCYFDNGDDCIAIKSGRNNDGRRINAPSENIIIRNC 310
Query: 278 LLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDA 334
++ G V GSE+SGG V E+ + DS N + ++ RGG + + + +
Sbjct: 311 TMKDGHG-GVVIGSEISGGCRFVFAEECKM-DSPNLDRMLRIKSNTVRGGVVEHVYVRNI 368
Query: 335 ELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFAN 394
E+ ++ A N P + D P I +++ A F G++E+P N
Sbjct: 369 EVGEVSNAIVRM-NMFYDPKEIGPRDFPPKFRNIRVENVTSRKSDYALEFLGLEESPIEN 427
Query: 395 ICLSNISLS 403
+ + N +
Sbjct: 428 VEIINCDFN 436
>gi|167765390|ref|ZP_02437503.1| hypothetical protein BACSTE_03778 [Bacteroides stercoris ATCC
43183]
gi|167697018|gb|EDS13597.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 452
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 184/398 (46%), Gaps = 54/398 (13%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW-LTGSFNLTSHLTLFLE 101
+T++GA D + A AI + + GG + +P+G + + G+ L S++ L +
Sbjct: 53 VTDYGAKSDTTFDSCPAILQAISHCNT---NGGGTVLIPAGNYFIKGAITLKSNINLHIA 109
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
+GA + S + D + + + G E Y I Y +V VTG GTIDG GS
Sbjct: 110 EGARLEFSTEAA--DYLPMVLTKWEGTEC--FNYSPFIYAYQCTNVAVTG-KGTIDGNGS 164
Query: 162 VWWD-WFSSQ-----------------------SLNYSRPHLVEFISSENVVVSNLTFLN 197
V ++ W + Q +Y RP +++F +NV+V +L +
Sbjct: 165 VTFNGWHAIQGPAVDRLRQMGIDSVPVYQRVFGEGHYLRPCMIQFYGCKNVLVEDLKIYD 224
Query: 198 APAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSG 257
+P + IHPV+C NV ++N+ + + + G P+S NV IE +G D I++KSG
Sbjct: 225 SPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESCTNVLIEGMDFNVGDDGIAIKSG 282
Query: 258 WDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFR 317
D+ G G+ T +V IR + ++ GSEMSGG+ N+ +E + NGI F+
Sbjct: 283 RDQDGWRIGQATENVIIRNCHF---ARWAITVGSEMSGGVRNIYIEDCKIDSCRNGIYFK 339
Query: 318 TTKGRGGYIRQI----VISDAELYN-INVAFGACG-NCGSHPDDDFDPDALPAIDQITFK 371
+ RGGY + + +D L+ IN G G+HP I +
Sbjct: 340 SNPDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYRGGNHP---------TLFRNICIE 390
Query: 372 DIIGTNI-TIAGNFTGIQEAPFANICLSNISLSINPGS 408
D+ + ++A G+ EA NI L NI++ P +
Sbjct: 391 DVTCNRVDSVALMANGLPEAKLHNITLRNINVKKAPKA 428
>gi|397656221|ref|YP_006496923.1| Polygalacturonase [Klebsiella oxytoca E718]
gi|394344836|gb|AFN30957.1| Polygalacturonase [Klebsiella oxytoca E718]
Length = 460
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 181/409 (44%), Gaps = 63/409 (15%)
Query: 43 ITEFGAVGDGK--TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
IT +GA G LNT A Q AI A GG + VP G +LT L +++ L L
Sbjct: 38 ITHYGAEGHRLQIALNTDAIQKAI---DDCAAAGGGTVLVPKGNFLTNPLFLKNNIQLKL 94
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM-------LRDVVVTGDN 153
EK A ++ S + + RG + RY NG++ ++V + G+
Sbjct: 95 EKDATLVASTEVAAY----------RGDD--KTRYAEAENGWLPFISIADAQNVAIVGE- 141
Query: 154 GTIDGQGSVWWDWF------SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
GTIDGQG+VWW+ + + + RP L+ + NV++ +T ++P++++ Y
Sbjct: 142 GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFHVVTRY 201
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
+V I + +P +P T I P S N+ I + I D I++K+ + G
Sbjct: 202 AHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPEGV 261
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
+++I L+ G S+ GSE +GG++NV VE S+ GI ++ +G+GG ++
Sbjct: 262 -VDNIYIANNTLKQGRGISI--GSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVK 318
Query: 328 QIVISDAELYNINV--AFGACGNCG--------------------------SHPDDDFDP 359
IV + ++N+ V F A S P FD
Sbjct: 319 NIVYRNTRMHNVEVPLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDK 378
Query: 360 DALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLSINPG 407
P IT +++ T + A + G EAP + SN+++ + G
Sbjct: 379 YKTPHFSNITVENLTSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRG 427
>gi|375100883|ref|ZP_09747146.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661615|gb|EHR61493.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 460
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 177/390 (45%), Gaps = 49/390 (12%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLT-GSFNLTSHLTLFLE 101
+T+FGAVGDG+T + A AI + GG ++ +P G W + G +L SH+ L +
Sbjct: 58 VTDFGAVGDGRTDSHDAITAAIAAAHT---DGGGRVVLPEGTWRSDGPLHLESHIELHVS 114
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ-G 160
GA ++ +P+ D + + + G E+ G Y LI + + DV +TG NG IDG
Sbjct: 115 DGAHLIFGPDPA--DYLPAVHTRWEGTEMYG--YSPLIYAHDVHDVAITG-NGVIDGNPD 169
Query: 161 SVWWDWFSSQSLN-----------------------YSRPHLVEFISSENVVVSNLTFLN 197
S + W Q + + RP +++ +E V++++ T N
Sbjct: 170 SEFHTWTDKQDADVQALRRMGFDGVPLEQRQFGEGHHLRPSMIQIFDAERVLLADYTVRN 229
Query: 198 APAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSG 257
+P + H VY + ++ ++V + +P G+ DSS +V IE G D++ +KSG
Sbjct: 230 SPFWINHLVYTDDAVVRGLTVDS--HNPNNDGVDVDSSTDVLIEHNTFRTGDDSVVVKSG 287
Query: 258 WDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFR 317
D+ G GRP+ +V +R + G +A GSEMSGGIS+V L I F+
Sbjct: 288 RDKDGRDIGRPSRNVVVRHNDMGGEDG--IALGSEMSGGISHVYFTDNTLRSGAAAIRFK 345
Query: 318 TTKGRGGYIRQIVISDAELYN----INVAFGACGNCGSHPDDDFDPDALPAIDQITFKDI 373
RGG + I + + ++ + I G G D P I F D
Sbjct: 346 GNLDRGGTVEHIRVRNFDIDSFERLIWFQLDYPGELGG--------DFPPVYRDIVFSDF 397
Query: 374 IGTNITIAGNFTGIQEAPFANICLSNISLS 403
T+ G AP ++ L NI+++
Sbjct: 398 TVTSADTLLEIHGPDAAPLRDVTLRNITVA 427
>gi|237710960|ref|ZP_04541441.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|265750548|ref|ZP_06086611.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|229454804|gb|EEO60525.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|263237444|gb|EEZ22894.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
Length = 443
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 175/400 (43%), Gaps = 43/400 (10%)
Query: 31 QPTLDPRPHS-VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWL-TG 88
Q T RP +S+ FGA GDGK AF A +K A GGA + VP+G++L G
Sbjct: 18 QITGAVRPKKQISLISFGAKGDGKKDCKPAFDKA---MKRAAHMGGAHIVVPAGEYLLNG 74
Query: 89 SFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVV 148
+ S++ L L++GA + S P+ + + + + G L + Y I GY L +V
Sbjct: 75 PIHFVSNVCLELQEGATLKFSSEPAFY--LPLVKTSWEGTFL--QNYSPFIYGYQLENVS 130
Query: 149 VTGDNGTIDGQ-GSVWWDWFSSQSLN-----------------------YSRPHLVEFIS 184
+ G G IDG G+ + W S Q + + RPHLV+F
Sbjct: 131 IIG-KGVIDGNAGTTFATWKSKQKIGQQLSREMNHKEVPVAERNFGEGYWLRPHLVQFFD 189
Query: 185 SENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCI 244
+N+ + ++ NAP + IH + N+ + I A + GI P+ + N+ IE+
Sbjct: 190 CKNITIEDVFITNAPFWCIHLLKSENIICRGIRYDAKLVN--NDGIDPEYTRNLLIENIE 247
Query: 245 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 304
G D +++K G D G P+ ++ IR + G V GSEMS GI +V VE
Sbjct: 248 FNNGDDNVAIKCGRDNDGWKTSCPSENIIIRNCKFKGLHG--VVLGSEMSSGIQHVFVEN 305
Query: 305 IHLYDSLN-GIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALP 363
GI +T RGG+IR I +++ E + F + + D
Sbjct: 306 CTYGGYCKRGIFIKTNPDRGGFIRDIYVNNCEFGEVEDLFYV---TSMYAGEGMDNHHFT 362
Query: 364 AIDQITFKDIIGTNITIAG-NFTGIQEAPFANICLSNISL 402
+ I KD+ + +A G + P N+ N+ +
Sbjct: 363 EVHDIYVKDLKCKKVNVAALVLQGTEAKPIYNVTFDNVDV 402
>gi|189467900|ref|ZP_03016685.1| hypothetical protein BACINT_04292 [Bacteroides intestinalis DSM
17393]
gi|189436164|gb|EDV05149.1| FG-GAP repeat protein [Bacteroides intestinalis DSM 17393]
Length = 1068
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 149/322 (46%), Gaps = 39/322 (12%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
SI +GAV GKT+NT A AI K+ GG ++ +P+G+WLTG +L S++ L+L
Sbjct: 56 SIANYGAVKGGKTINTKAIAKAI---KACNKAGGGRVVIPAGEWLTGPVHLMSNVNLYLS 112
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GA++ + NP D + + + G+E Y L+ + +V +TG GT+
Sbjct: 113 DGAILRFTDNPE--DYLPAVMTSWEGMEC--YNYSPLVYAFDCENVAITG-TGTLQPIMD 167
Query: 162 VWWDWFS---------------------------SQSLNYSRPHLVEFISSENVVVSNLT 194
W WF ++ N RPHL+ F +NV++
Sbjct: 168 TWRKWFKRPKPHMDALAELYTMASTDVPVEKRQMAKGENNLRPHLIHFNRCKNVLLDQFK 227
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
+P + IH C ++N+ V+A + G+ + S N IEDC G DA+ +
Sbjct: 228 IRESPFWTIHLYMCDGGIVRNLDVYAHGHN--NDGVDLEMSRNFLIEDCKFDQGDDAVVI 285
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
K+G ++ P ++ IR + + + GSEMSGGI NV + DS+ +
Sbjct: 286 KAGRNQDAWRLDTPCENIVIRNCDIIKGH-TLLGIGSEMSGGIRNVYMHDCAAPDSVFRL 344
Query: 315 EF-RTTKGRGGYIRQIVISDAE 335
F +T RGG+I I + + +
Sbjct: 345 FFAKTNHRRGGFIENIHMENVK 366
>gi|325842985|ref|ZP_08167837.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
gi|325489511|gb|EGC91879.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
Length = 415
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 169/364 (46%), Gaps = 41/364 (11%)
Query: 76 AQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIEL----- 130
+ ++P G + T + L S+LTL LEKGA +L S + + LP Y +
Sbjct: 3 GEFFIPKGTYATKTIFLKSNLTLELEKGATLLYSASFESGAI---LPGYTKNSNHEEYYL 59
Query: 131 ------PGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV-WWDWFSSQSLNYSRPHLVEFI 183
P + +LI G + +V + G+ G +DG GS+ WWD+ +++ + RP L + I
Sbjct: 60 GSWEGNPLDTFTALIQGVNVSNVNLIGE-GVLDGNGSIGWWDFPKVRNVAW-RPRLFQII 117
Query: 184 SSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDC 243
S +V V +T N+P++ +HP++ ++ ++ + P +SP T G+ P+S V I
Sbjct: 118 HSHHVNVQGITLQNSPSWTVHPLFSDDLKFIDLKIINPKDSPNTDGLDPESCHRVLILGV 177
Query: 244 IIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVE 303
++G D I++KSG G R + + IR + G +V GSEM+GG+ ++ VE
Sbjct: 178 HFSVGDDCIAIKSGKIYLGSRLKRASEYITIRNCSMNFGHG-AVVIGSEMAGGVKHILVE 236
Query: 304 KIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI---NVAFGACGNCGSHPDDDFDPD 360
+ ++ G+ +T +GRG ++ D +I V NC D D +
Sbjct: 237 QCLFNETDRGLRIKTRRGRG---EAAIVEDVTFRHIEMEKVLTPLVVNCFYFCDPDGHSE 293
Query: 361 AL------------PAIDQITFKDIIGTNITIAGN-FTGIQEAPFANI----CLSNISLS 403
+ P I F+DI + IA F G+ E P + C+ + +
Sbjct: 294 YVKTKETLPVDYRTPDIRDFCFEDIKCRHSEIAAAYFYGLPEKPIERLSLKDCVFHFTTE 353
Query: 404 INPG 407
PG
Sbjct: 354 AEPG 357
>gi|383155065|gb|AFG59697.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155069|gb|AFG59699.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155073|gb|AFG59701.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155075|gb|AFG59702.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155077|gb|AFG59703.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155079|gb|AFG59704.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155081|gb|AFG59705.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155093|gb|AFG59711.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155095|gb|AFG59712.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155097|gb|AFG59713.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Query: 241 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 300
EDC ++ G D I++KSGWDEYGI++ RP++++ +RR+ + S+ S +A GSE SGGI ++
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITI-STPFSGIAIGSETSGGIRDI 59
Query: 301 QVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
VE I +Y S GI +T GRGG IR I S L N+ GN G HPD ++P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 361 ALPAIDQITFKDIIGTNI 378
ALP + I +++G++I
Sbjct: 120 ALPVVGDIAVLNVVGSSI 137
>gi|261207238|ref|ZP_05921927.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289567178|ref|ZP_06447568.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|294614358|ref|ZP_06694275.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430850287|ref|ZP_19468050.1| glycosyl hydrolase [Enterococcus faecium E1185]
gi|260078866|gb|EEW66568.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289161037|gb|EFD08947.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|291592830|gb|EFF24422.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430535912|gb|ELA76303.1| glycosyl hydrolase [Enterococcus faecium E1185]
Length = 436
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 37/317 (11%)
Query: 55 LNTLAF------QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
+N L F Q+ L+ D+G + +++P G +L G+ L L E+GAV
Sbjct: 8 INALNFKTNDTQQDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAV 67
Query: 106 ILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD 165
+ G + + +D + G+E+ + +++N +D+++ G G IDGQG WW+
Sbjct: 68 LKGRTDIEAFPEIDTRVA---GVEM--KWPAAILNVLSAKDILIEG-KGIIDGQGDHWWE 121
Query: 166 --W-----------FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
W + + L + RP +E+VVV +L F + +N+
Sbjct: 122 LYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQIT 181
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y ++V ++ + + + P T GI DSS NV I +C +A G D I++KSG D G
Sbjct: 182 YSNDVLVEKVIIR-NNDGPSTDGIDIDSSTNVRIYECDLACGDDCIAIKSGRDGNGARVN 240
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
R ++ + + R ++ SG V GSE+S G+S+V + I + S GI +++K RGG I
Sbjct: 241 RKSSRIEVARCKIR--SGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVI 298
Query: 327 RQIVISDAELYNINVAF 343
I + + + ++ F
Sbjct: 299 ENIRVENLNMIDVQFPF 315
>gi|423315483|ref|ZP_17293411.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
gi|392679286|gb|EIY72672.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
Length = 1095
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 162/355 (45%), Gaps = 18/355 (5%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I E+G G+G + T Q I A GG + +P+G++L+G+ + L +E
Sbjct: 709 NIKEYGVKGNGYS-ETATLQRII---NEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIE 764
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
K A ++ + +P+ + V+ P+ GIE +R++ + D V G IDG+G
Sbjct: 765 KNAKLISTVDPNEFPVI---PTRFEGIE---KRWRCAFLNFDHSDGVKVYGEGVIDGKGV 818
Query: 162 VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
+W N RP L+ F +S L +N ++ +H +Y + I I + A
Sbjct: 819 ---EWKKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 875
Query: 222 PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQS 281
P + GI DSS+++ I I D IS+KSG DE G GRP+ ++ I
Sbjct: 876 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 935
Query: 282 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG--IEFRTTKGRGGYIRQIVISDAELYNI 339
G VA GSE+SGGI NV + L D+ N + F++ RGG + I D +
Sbjct: 936 GHG-GVAMGSEISGGIRNVTIRSC-LMDNENWSPLRFKSQPSRGGTVENITFEDITIKGA 993
Query: 340 NVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFAN 394
F P L ++ I FK+I G + AG G +EAPF N
Sbjct: 994 RSIFDINMEWRMVPPLSPAHYPLTSLRNIHFKNINGEAQS-AGTMYGFKEAPFGN 1047
>gi|293557205|ref|ZP_06675755.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
gi|291600657|gb|EFF30959.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
Length = 443
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 155/319 (48%), Gaps = 37/319 (11%)
Query: 53 KTLNTLAF------QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLTLFLEKG 103
+ +N L F Q+ L+ D+G + +++P G +L G+ L L E+G
Sbjct: 13 RIINALNFKTNDTQQDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEG 72
Query: 104 AVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVW 163
AV+ G + + +D + G+E+ + +++N +D+++ G G IDGQG W
Sbjct: 73 AVLKGRTDIEAFPEIDTRVA---GVEM--KWPAAILNVLSAKDILIEG-KGIIDGQGDHW 126
Query: 164 WD--W-----------FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAYNIH 204
W+ W + + L + RP +E+VVV +L F + +N+
Sbjct: 127 WELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQ 186
Query: 205 PVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIA 264
Y ++V ++ + + + P T GI DSS NV + +C +A G D I++KSG D G
Sbjct: 187 ITYSNDVLVEKVIIR-NNDGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGAR 245
Query: 265 YGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGG 324
R ++ + + R ++ SG V GSE+S G+S+V + I + S GI +++K RGG
Sbjct: 246 VNRKSSRIEVARCKIR--SGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGG 303
Query: 325 YIRQIVISDAELYNINVAF 343
I I + + + ++ F
Sbjct: 304 VIENIRVENLNMIDVQFPF 322
>gi|257883313|ref|ZP_05662966.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|294622163|ref|ZP_06701235.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|424791207|ref|ZP_18217685.1| polygalacturonase [Enterococcus faecium V689]
gi|424796702|ref|ZP_18222393.1| polygalacturonase [Enterococcus faecium S447]
gi|424949498|ref|ZP_18365166.1| polygalacturonase [Enterococcus faecium R496]
gi|424953671|ref|ZP_18368620.1| polygalacturonase [Enterococcus faecium R494]
gi|424956677|ref|ZP_18371442.1| polygalacturonase [Enterococcus faecium R446]
gi|424968089|ref|ZP_18381747.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994453|ref|ZP_18406390.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998615|ref|ZP_18410289.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001111|ref|ZP_18412641.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005192|ref|ZP_18416457.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011657|ref|ZP_18422540.1| polygalacturonase [Enterococcus faecium E422]
gi|425017825|ref|ZP_18428310.1| polygalacturonase [Enterococcus faecium C621]
gi|425032265|ref|ZP_18437333.1| polygalacturonase [Enterococcus faecium 515]
gi|425039363|ref|ZP_18443906.1| polygalacturonase [Enterococcus faecium 513]
gi|427397514|ref|ZP_18889996.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430860949|ref|ZP_19478544.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430968697|ref|ZP_19487858.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|431017550|ref|ZP_19490427.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|431261224|ref|ZP_19505721.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|431777891|ref|ZP_19566132.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|431783620|ref|ZP_19571718.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|431786792|ref|ZP_19574790.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|447913735|ref|YP_007395147.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|257818971|gb|EEV46299.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|291598332|gb|EFF29421.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|402919873|gb|EJX40434.1| polygalacturonase [Enterococcus faecium V689]
gi|402922629|gb|EJX42990.1| polygalacturonase [Enterococcus faecium S447]
gi|402934203|gb|EJX53573.1| polygalacturonase [Enterococcus faecium R496]
gi|402938575|gb|EJX57571.1| polygalacturonase [Enterococcus faecium R494]
gi|402945373|gb|EJX63728.1| polygalacturonase [Enterococcus faecium R446]
gi|402952951|gb|EJX70715.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980028|gb|EJX95661.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982462|gb|EJX97925.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987164|gb|EJY02253.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987438|gb|EJY02501.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995993|gb|EJY10403.1| polygalacturonase [Enterococcus faecium E422]
gi|403003651|gb|EJY17535.1| polygalacturonase [Enterococcus faecium C621]
gi|403013574|gb|EJY26660.1| polygalacturonase [Enterococcus faecium 515]
gi|403016109|gb|EJY28944.1| polygalacturonase [Enterococcus faecium 513]
gi|425722190|gb|EKU85087.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430551267|gb|ELA91036.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430554867|gb|ELA94435.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|430559249|gb|ELA98609.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|430576629|gb|ELB15266.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|430638495|gb|ELB74426.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|430644804|gb|ELB80385.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|430644943|gb|ELB80507.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|445189444|gb|AGE31086.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 436
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 155/317 (48%), Gaps = 37/317 (11%)
Query: 55 LNTLAF------QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
+N L F Q+ L+ D+G + +++P G +L G+ L L E+GAV
Sbjct: 8 INALNFKTNDTQQDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAV 67
Query: 106 ILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD 165
+ G + + +D + G+E+ + +++N +D+++ G G IDGQG WW+
Sbjct: 68 LKGRTDIEAFPEIDTRVA---GVEM--KWPAAILNVLSAKDILIEG-KGIIDGQGDHWWE 121
Query: 166 --W-----------FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
W + + L + RP +E+VVV +L F + +N+
Sbjct: 122 LYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQIT 181
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y ++V ++ + + + P T GI DSS NV + +C +A G D I++KSG D G
Sbjct: 182 YSNDVLVEKVIIR-NNDGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVN 240
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
R ++ + + R ++ SG V GSE+S G+S+V + I+ + S GI +++K RGG I
Sbjct: 241 RKSSRIEVARCKIR--SGYGVTIGSEVSAGVSDVYIHDINFFQSDCGIRMKSSKERGGVI 298
Query: 327 RQIVISDAELYNINVAF 343
I + + + ++ F
Sbjct: 299 ENIRVENLNMIDVQFPF 315
>gi|430824494|ref|ZP_19443051.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430868568|ref|ZP_19482862.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|431744399|ref|ZP_19533267.1| glycosyl hydrolase [Enterococcus faecium E2071]
gi|430441022|gb|ELA51165.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430548832|gb|ELA88680.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|430605142|gb|ELB42547.1| glycosyl hydrolase [Enterococcus faecium E2071]
Length = 436
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 153/317 (48%), Gaps = 37/317 (11%)
Query: 55 LNTLAF------QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
+N L F Q+ L+ D+G + +++P G +L G+ L L E+GAV
Sbjct: 8 INALNFKTNDTQQDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAV 67
Query: 106 ILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD 165
+ G + + +D + G ++ P +++N +D+++ G G IDGQG WW+
Sbjct: 68 LKGRTDIEAFPEIDTRVA-GAEMKWPA----AILNVLSAKDILIEG-KGIIDGQGDHWWE 121
Query: 166 --W-----------FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
W + + L + RP +E+VVV +L F + +N+
Sbjct: 122 LYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQIT 181
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y ++V ++ + + + P T GI DSS NV + +C +A G D I++KSG D G
Sbjct: 182 YSNDVLVEKVIIR-NNDGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVN 240
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
R ++ + + R ++ SG V GSE+S G+S+V + I + S GI +++K RGG I
Sbjct: 241 RKSSRIEVARCKIR--SGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVI 298
Query: 327 RQIVISDAELYNINVAF 343
I + + + ++ F
Sbjct: 299 ENIRVENLNMIDVQFPF 315
>gi|431703877|ref|ZP_19525103.1| glycosyl hydrolase [Enterococcus faecium E1904]
gi|430596723|gb|ELB34539.1| glycosyl hydrolase [Enterococcus faecium E1904]
Length = 436
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 154/317 (48%), Gaps = 37/317 (11%)
Query: 55 LNTLAF------QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
+N L F Q+ L+ D+G + +++P G +L G+ L L E+GAV
Sbjct: 8 INALNFKTNDTQQDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAV 67
Query: 106 ILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD 165
+ G + + +D + G+E+ + +++N +D+++ G G IDGQG WW+
Sbjct: 68 LKGRTDIEAFPEIDTRVA---GVEM--KWPAAILNVLSAKDILIEG-KGIIDGQGDHWWE 121
Query: 166 --W-----------FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
W + + L + RP +E+VVV +L F + +N+
Sbjct: 122 LYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQIT 181
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y ++V ++ + + + P T GI DSS NV + +C +A G D I++KSG D G
Sbjct: 182 YSNDVLVEKVIIR-NNDGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVN 240
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
R ++ + + R ++ SG V GSE+S G+S+V + I + S GI +++K RGG I
Sbjct: 241 RKSSRIEVARCKIR--SGYGVTIGSEVSAGVSDVYIRDIDFFQSDCGIRMKSSKERGGVI 298
Query: 327 RQIVISDAELYNINVAF 343
I + + + ++ F
Sbjct: 299 ENIRVENLNMIDVQFPF 315
>gi|388256014|ref|ZP_10133195.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
gi|387939714|gb|EIK46264.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
Length = 505
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 178/409 (43%), Gaps = 69/409 (16%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
S + +FGA DGK NT AF AI K+ D GG ++ V G +L+G +L S++ L
Sbjct: 86 RSFDVRDFGAKADGKHNNTQAFAAAI---KACHDAGGGKVVVAGGDYLSGPIHLLSNINL 142
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ +GA IL +PS + + + + G+EL G Y LI Y ++ +TG G +DG
Sbjct: 143 HVAEGARILFITDPSAY--LPAVFTRWEGMELMG--YSPLIYAYGQTNIAITG-KGVLDG 197
Query: 159 QG--SVWWDWFSS------------------------QSLN--------------YSRPH 178
Q + WW W Q + Y RP
Sbjct: 198 QANRTTWWPWKGGAWKGGTDWSMPGVPTQDAARDKLMQDMENGVPVAERMYADGAYLRPP 257
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
++ + +NV++ +T NAP + ++PV C NV + V+ P + G P+S NV
Sbjct: 258 FIQPYACKNVLIEGVTITNAPFWLLNPVLCENVTVD--GVNCISHGPNSDGCDPESCKNV 315
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
I++C+ G D I++KSG + G PT ++ I ++ G V GSE+SGG+
Sbjct: 316 VIKNCLFDTGDDCIAIKSGRNADGRRLNTPTENIVISHCKMREGHG-GVVIGSEISGGVR 374
Query: 299 NVQVEKIHLY--DSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDD 356
NV VE + + GI +T RGG I I D + + A D
Sbjct: 375 NVFVEHCEMSSPNLDRGIRIKTNSVRGGVIENFFIRDITIGEVTTAIVI----------D 424
Query: 357 FDPDA------LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
FD + P + I +++ N G + +P N+ L+N
Sbjct: 425 FDYEEGDAGKFTPTVRNIDIRNLHCENAKHVFQVRGYKRSPIQNLHLTN 473
>gi|375259243|ref|YP_005018413.1| glycoside hydrolase [Klebsiella oxytoca KCTC 1686]
gi|365908721|gb|AEX04174.1| glycoside hydrolase family protein [Klebsiella oxytoca KCTC 1686]
Length = 460
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 181/409 (44%), Gaps = 63/409 (15%)
Query: 43 ITEFGAVGDGK--TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
IT +GA G LNT A Q AI A GG + VP G +LT L +++ L L
Sbjct: 38 ITHYGAEGHRLQIALNTDAIQKAI---DDCAAAGGGTVLVPKGNFLTNPLFLKNNIQLKL 94
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM-------LRDVVVTGDN 153
EK A ++ S + + RG + RY NG++ ++V + G+
Sbjct: 95 EKDATLVASTEVAAY----------RGDD--KTRYAEAENGWLPFISIADAQNVAIVGE- 141
Query: 154 GTIDGQGSVWWDWF------SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
GTIDGQG+VWW+ + + + RP L+ + NV++ +T ++P++++ Y
Sbjct: 142 GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYITRASNVLIYGVTLTHSPSFHVVTRY 201
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
+V I + +P +P T I P S N+ I + I D I++K+ + G
Sbjct: 202 AHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPEGV 261
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
+++I L+ G S+ GSE +GG++NV VE S+ GI ++ +G+GG ++
Sbjct: 262 -VDNIYIANNTLKQGRGISI--GSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVK 318
Query: 328 QIVISDAELYNINV--AFGACGNCG--------------------------SHPDDDFDP 359
IV + ++N+ V F A S P FD
Sbjct: 319 NIVYRNTRMHNVEVPLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDK 378
Query: 360 DALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLSINPG 407
P IT +++ T + A + G EAP + SN+++ + G
Sbjct: 379 YKTPHFSNITVENLTSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRG 427
>gi|384566069|ref|ZP_10013173.1| endopolygalacturonase [Saccharomonospora glauca K62]
gi|384521923|gb|EIE99118.1| endopolygalacturonase [Saccharomonospora glauca K62]
Length = 491
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 181/403 (44%), Gaps = 53/403 (13%)
Query: 38 PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLT 97
P V+IT GA G+ +T + + A KGG ++ VP G++ TG+ +L S++
Sbjct: 59 PRRVTITAHGADPTGRRDST---DAIAAAITAAARKGGGKVVVPPGEYRTGAIHLRSNIE 115
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
L + +GA + SQ+P+ D + + + GIEL Y + Y + DV +TG+ G +D
Sbjct: 116 LHVSRGATLRFSQDPA--DYLPMVHTRWEGIEL--YNYSPFVYAYGVHDVAITGE-GVLD 170
Query: 158 GQGSV--WWDW---------------------FSSQSLNYS---------RPHLVEFISS 185
GQ WW W + Q + + RP+ V+F S
Sbjct: 171 GQADPEHWWPWKTEPDGHGGVVETEHRNALHAMAEQGVPVAQRRFADSKLRPNFVQFYRS 230
Query: 186 ENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCII 245
++VS +T N+P + IHPV NV + +++ + P+ P + G+ P+SS NV I +
Sbjct: 231 STILVSGVTLTNSPMWMIHPVLSENVLVDGVTLDS-PDGPNSDGVNPESSRNVVIRNSRF 289
Query: 246 AMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK- 304
G D I++KSG + G G P+ ++ I + + G V GSEMSG + NV E+
Sbjct: 290 NNGDDCIAVKSGRNADGRRIGVPSENIVIHDNRMFAGHG-GVVIGSEMSGDVRNVFAERN 348
Query: 305 ----IHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
HL +L +T RGG + + D + + A H ++ D
Sbjct: 349 VMNSPHLDRAL---RIKTNSVRGGTVEGVYFRDND---VPAVADAVIRINFHYEEGDVGD 402
Query: 361 ALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
P + I ++ A G + +P +I + + + S
Sbjct: 403 FTPTVRGIHIDNVHSVGGEFALYLRGYERSPITDITIRDSTFS 445
>gi|257880502|ref|ZP_05660155.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257891467|ref|ZP_05671120.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257894590|ref|ZP_05674243.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260562501|ref|ZP_05833011.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|293559900|ref|ZP_06676412.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|293568218|ref|ZP_06679552.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|314938533|ref|ZP_07845818.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942449|ref|ZP_07849289.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314952938|ref|ZP_07855905.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992207|ref|ZP_07857650.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995236|ref|ZP_07860348.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329848|ref|YP_005355732.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|406581503|ref|ZP_11056645.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583794|ref|ZP_11058839.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586138|ref|ZP_11061075.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591702|ref|ZP_11065948.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936303|ref|ZP_11368170.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|415891700|ref|ZP_11549789.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|416141648|ref|ZP_11599441.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|424845982|ref|ZP_18270582.1| polygalacturonase [Enterococcus faecium R501]
gi|424854970|ref|ZP_18279301.1| polygalacturonase [Enterococcus faecium R499]
gi|424907683|ref|ZP_18331153.1| polygalacturonase [Enterococcus faecium R497]
gi|424960554|ref|ZP_18375059.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964733|ref|ZP_18378800.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971125|ref|ZP_18384586.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974628|ref|ZP_18387853.1| polygalacturonase [Enterococcus faecium P1137]
gi|424981126|ref|ZP_18393878.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983701|ref|ZP_18396276.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987499|ref|ZP_18399873.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424992279|ref|ZP_18404358.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007167|ref|ZP_18418312.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014690|ref|ZP_18425355.1| polygalacturonase [Enterococcus faecium E417]
gi|425021599|ref|ZP_18431838.1| polygalacturonase [Enterococcus faecium C497]
gi|425023083|ref|ZP_18433222.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034686|ref|ZP_18439563.1| polygalacturonase [Enterococcus faecium 514]
gi|425042059|ref|ZP_18446425.1| polygalacturonase [Enterococcus faecium 511]
gi|425046653|ref|ZP_18450650.1| polygalacturonase [Enterococcus faecium 510]
gi|425047905|ref|ZP_18451836.1| polygalacturonase [Enterococcus faecium 509]
gi|425051840|ref|ZP_18455481.1| polygalacturonase [Enterococcus faecium 506]
gi|425060678|ref|ZP_18463962.1| polygalacturonase [Enterococcus faecium 503]
gi|430821821|ref|ZP_19440408.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430827440|ref|ZP_19445583.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430830082|ref|ZP_19448148.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430832646|ref|ZP_19450686.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430845573|ref|ZP_19463457.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430848406|ref|ZP_19466225.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430856188|ref|ZP_19473891.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430921156|ref|ZP_19485323.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|431220446|ref|ZP_19501380.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|431243678|ref|ZP_19503851.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|431323331|ref|ZP_19509135.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|431388094|ref|ZP_19511700.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|431472779|ref|ZP_19514507.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|431520920|ref|ZP_19516634.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|431565479|ref|ZP_19519841.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|431747812|ref|ZP_19536581.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|431750357|ref|ZP_19539076.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|431755435|ref|ZP_19544084.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|431761409|ref|ZP_19549983.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|431766527|ref|ZP_19555004.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|431769102|ref|ZP_19557530.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|431771653|ref|ZP_19560033.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|431774523|ref|ZP_19562830.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|431780630|ref|ZP_19568803.1| glycosyl hydrolase [Enterococcus faecium E4389]
gi|257814730|gb|EEV43488.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257827827|gb|EEV54453.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257830969|gb|EEV57576.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260073186|gb|EEW61531.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|291589118|gb|EFF20932.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|291606172|gb|EFF35594.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|313590492|gb|EFR69337.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593265|gb|EFR72110.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595010|gb|EFR73855.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598757|gb|EFR77602.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642161|gb|EFS06741.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|364090042|gb|EHM32674.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|364093760|gb|EHM35997.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|378939542|gb|AFC64614.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|402919810|gb|EJX40376.1| polygalacturonase [Enterococcus faecium R501]
gi|402930037|gb|EJX49740.1| polygalacturonase [Enterococcus faecium R497]
gi|402931903|gb|EJX51454.1| polygalacturonase [Enterococcus faecium R499]
gi|402945951|gb|EJX64271.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947336|gb|EJX65555.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955971|gb|EJX73460.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959993|gb|EJX77186.1| polygalacturonase [Enterococcus faecium P1139]
gi|402964601|gb|EJX81373.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970834|gb|EJX87147.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402973957|gb|EJX90038.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402974321|gb|EJX90380.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402995601|gb|EJY10044.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402998000|gb|EJY12285.1| polygalacturonase [Enterococcus faecium E417]
gi|403006140|gb|EJY19807.1| polygalacturonase [Enterococcus faecium C497]
gi|403010837|gb|EJY24182.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019832|gb|EJY32411.1| polygalacturonase [Enterococcus faecium 514]
gi|403023546|gb|EJY35791.1| polygalacturonase [Enterococcus faecium 510]
gi|403024469|gb|EJY36625.1| polygalacturonase [Enterococcus faecium 511]
gi|403032233|gb|EJY43801.1| polygalacturonase [Enterococcus faecium 509]
gi|403036566|gb|EJY47912.1| polygalacturonase [Enterococcus faecium 506]
gi|403042389|gb|EJY53347.1| polygalacturonase [Enterococcus faecium 503]
gi|404452562|gb|EJZ99746.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456117|gb|EKA02874.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461646|gb|EKA07540.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467225|gb|EKA12407.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735249|gb|EKQ77163.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|430438093|gb|ELA48581.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430444048|gb|ELA53960.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430479137|gb|ELA56411.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430479701|gb|ELA56917.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430495380|gb|ELA71555.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430534977|gb|ELA75402.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430545274|gb|ELA85257.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430554049|gb|ELA93721.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|430569541|gb|ELB08542.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|430571647|gb|ELB10533.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|430577979|gb|ELB16555.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|430580359|gb|ELB18832.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|430583564|gb|ELB21926.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|430585063|gb|ELB23364.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|430589388|gb|ELB27517.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|430604699|gb|ELB42134.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|430609784|gb|ELB46961.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|430616657|gb|ELB53552.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|430621550|gb|ELB58311.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|430626087|gb|ELB62675.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|430628018|gb|ELB64476.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|430632927|gb|ELB69117.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|430633928|gb|ELB70073.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|430639085|gb|ELB74967.1| glycosyl hydrolase [Enterococcus faecium E4389]
Length = 436
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 154/317 (48%), Gaps = 37/317 (11%)
Query: 55 LNTLAF------QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
+N L F Q+ L+ D+G + +++P G +L G+ L L E+GAV
Sbjct: 8 INALNFKTNDTQQDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAV 67
Query: 106 ILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD 165
+ G + + +D + G+E+ + +++N +D+++ G G IDGQG WW+
Sbjct: 68 LKGRTDIEAFPEIDTRVA---GVEM--KWPAAILNVLSAKDILIEG-KGIIDGQGDHWWE 121
Query: 166 --W-----------FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
W + + L + RP +E+VVV +L F + +N+
Sbjct: 122 LYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQIT 181
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y ++V ++ + + + P T GI DSS NV + +C +A G D I++KSG D G
Sbjct: 182 YSNDVLVEKVIIR-NNDGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVN 240
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
R ++ + + R ++ SG V GSE+S G+S+V + I + S GI +++K RGG I
Sbjct: 241 RKSSRIEVARCKIR--SGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVI 298
Query: 327 RQIVISDAELYNINVAF 343
I + + + ++ F
Sbjct: 299 ENIRVENLNMIDVQFPF 315
>gi|82524094|emb|CAJ19131.1| putative endopolygalacturonase [unidentified microorganism]
Length = 448
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 179/397 (45%), Gaps = 54/397 (13%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSG-KWLTGSFNLTSHLT 97
+ ++I + GA G+G T AF+ A K KGGA++ VP+G ++ G +L S++
Sbjct: 33 YVINIQKMGAKGNGTTDCLPAFKKA---FKKAVRKGGARIVVPAGVYYIKGPLHLVSNVC 89
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
L +++GA + + P ++ + + + G L + Y I GY L DV + G GTID
Sbjct: 90 LEIQEGATLKFAPEPEYY--LPAVKTSWEGTFL--QNYSPFIYGYQLHDVSIIG-KGTID 144
Query: 158 GQG-SVWWDWFS--------SQSLN---------------YSRPHLVEFISSENVVVSNL 193
G + + W S S+ +N Y RPHL++ E + + ++
Sbjct: 145 GNAMTTFATWRSLQKPAQQRSRDMNHAGTPVSERNFGEGDYLRPHLIQLYGCERITIEDV 204
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
N+P + IH + N +++I A + GI P+ S NV IED G D ++
Sbjct: 205 FITNSPFWCIHLLQSENAILRSIRFDAKLVN--NDGIDPEMSRNVLIEDVHFNNGDDNVA 262
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYD-SLN 312
+KSG D G P+ ++ IR + +V GSEMS GI NV VE
Sbjct: 263 IKSGRDHDGRGTACPSENIIIRNCHFKGL--HAVVLGSEMSAGIQNVYVENCDYAGYCKR 320
Query: 313 GIEFRTTKGRGGYIRQIVISDAE------LYNINVAFGACGNCGSHPDDDFDPDALPAID 366
G+ +T RGG+IR I + E L+ I +G G D+ F D I+
Sbjct: 321 GLYIKTNPDRGGFIRNISFKNCEFDEVEDLFYITSMYG-----GEGQDNTFFTD----IE 371
Query: 367 QITFKDIIGTNITIAG-NFTGIQEAPFANICLSNISL 402
IT ++I G G + P NI NI++
Sbjct: 372 NITVENIQCRKARAGGLVLQGTKAKPLRNIQFRNITI 408
>gi|322437669|ref|YP_004219759.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165562|gb|ADW71265.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 482
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 178/417 (42%), Gaps = 47/417 (11%)
Query: 32 PTLDPRPH-SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
PT P+ V++ + GA GDG T +T+A Q A L + GG ++ VP+G++LTG+
Sbjct: 31 PTQKPKSDVQVNVRDLGATGDGSTKDTVAMQLA---LDRCSVLGGGEVLVPAGEYLTGAL 87
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
+ S+ L +E+GA + GS + + + GR I + Y + I+ +V +
Sbjct: 88 RIHSNTVLRIEEGASLNGSPDIGDYPFTQ-VRWEGRWI----KGYSAFISAQDGENVTII 142
Query: 151 GDNGTI------------DGQGSVWWDWFSSQSLN------------YSRPHLVEFISSE 186
G + DG V+ + + N P L+EF
Sbjct: 143 GKGKIVASPAIKGRVVHADGSPMVYTRPAAGTAPNPDGPTNVARRDIMRNPALMEFTHCR 202
Query: 187 NVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIA 246
NV+V ++ ++ HPVYC NV +N++VH+ + GI DS V I+ C
Sbjct: 203 NVLVQDVFTQGNDMWSTHPVYCENVTFRNVTVHSGAD-----GIDVDSCKGVVIDGCEFV 257
Query: 247 MGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIH 306
D ISLKSG G G D+HI + + + GSE SGGI NV VE
Sbjct: 258 TRDDCISLKSGRGMEGNTIGVVCEDIHISNCTFNDAVWACIGIGSETSGGIRNVHVEHCK 317
Query: 307 LYDSLN-GIEFRTTKGRGGYIRQIVISDAELYNIN---VAFGACGNCGSHPDDDFDPDAL 362
+ I ++ GRG +I I ++D E+ + F + PD D +
Sbjct: 318 CLGARTFAIYIKSRPGRGAFIEDIYMNDLEVSGAQQGFLRFNILNSGLQDPDPVPGDDGI 377
Query: 363 PAIDQITFKDIIGTNITIAGNFTGIQ-EAPFANICLSNISLSINPGSYNSWECSNIH 418
P I F +I ++ + + I P L+N++ + G +NIH
Sbjct: 378 PTIRNFHFSNIRVKDVPVLVDGASIHPRKPLEGFSLTNVTGTCGKG----IRLANIH 430
>gi|294815999|ref|ZP_06774642.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444342|ref|ZP_08219076.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328598|gb|EFG10241.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 479
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 169/354 (47%), Gaps = 55/354 (15%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT++GAVGDG T NT A + AI GG + VP+G+++TG+ +L + L + +
Sbjct: 70 ITQYGAVGDGTTKNTAAIRAAITACHR---AGGGHVLVPAGRFVTGAIHLRGGVDLHVSE 126
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
G ++ S +P+ D + + + G E Y + + R V VTG+ G +DGQ
Sbjct: 127 GGILAFSPDPA--DYLPAVLTRWEGTEC--WNYSPFVYAHNQRGVAVTGE-GILDGQARR 181
Query: 163 --WWDWFSSQSL--------------------------NYSRPHLVEFISSENVVVSNLT 194
W W+ + +L +Y RP +V+F +V++S+LT
Sbjct: 182 GPWESWYRTGTLQGPDQRLLRKMGSEGVPVKDRLFGAGHYLRPKMVQFNRCRDVLISDLT 241
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
++ P + +HPV C+NV ++NI+V + + T G+ P++S V I C D +++
Sbjct: 242 IVDPPMWTVHPVLCTNVTVRNITVESLLHN--TDGVDPEASRLVHITGCRFNTNDDCVAV 299
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL------- 307
K+G DE G G P+ D+ ++ G + GSEMSGG+ V E +
Sbjct: 300 KAGRDEDGHRVGVPSEDIVVQDCDFSGRWG-GITVGSEMSGGVRRVFAEDCRINPPDFPG 358
Query: 308 -YDSLNGIEFRTTKGRGGYIRQIVIS-------DAELYNINVAFGACGNCGSHP 353
Y + + +K RGG++ + + + E+ +N+ + G G+HP
Sbjct: 359 HYPVKYPVYLKASKKRGGFVDGVYVRRFSGQAVEREVLFVNMDYNG-GEGGTHP 411
>gi|257886390|ref|ZP_05666043.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
gi|257822246|gb|EEV49376.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
Length = 436
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 154/317 (48%), Gaps = 37/317 (11%)
Query: 55 LNTLAF------QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
+N L F Q+ L+ D+G + +++P G +L G+ L L E+GAV
Sbjct: 8 INALNFKTNDTQQDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAV 67
Query: 106 ILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD 165
+ G + + +D + G+E+ + +++N +D+++ G G IDGQG WW+
Sbjct: 68 LKGRTDIEAFPEIDTRVA---GVEM--KWPAAILNVLSAKDILIEG-KGIIDGQGDHWWE 121
Query: 166 --W-----------FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
W + + L + RP +E+VVV +L F + +N+
Sbjct: 122 LYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQIT 181
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y ++V ++ + + + P T GI DSS NV + +C +A G D I++KSG D G
Sbjct: 182 YSNDVLVEKVIIR-NNDGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVN 240
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
R ++ + + R ++ SG V GSE+S G+S+V + I + S GI +++K RGG I
Sbjct: 241 RKSSRIEVARCKIR--SGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVI 298
Query: 327 RQIVISDAELYNINVAF 343
I + + + ++ F
Sbjct: 299 ENIRVENLNMIDVQFPF 315
>gi|410634542|ref|ZP_11345177.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
gi|410145928|dbj|GAC22044.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
Length = 477
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 181/408 (44%), Gaps = 64/408 (15%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+++SITE GA + ++ A + I + S GG + VP+G++ TG +L S++
Sbjct: 58 YAMSITELGAKPGFENDSSEAIRQTIAKVVS---AGGGTVVVPAGEFYTGPVHLESNINF 114
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ KGAV+ P + + + G EL G LI Y +V +TG G ++G
Sbjct: 115 HIAKGAVLHFYPEPERYKPY--VFTRWEGTELMG--LSPLIYAYKKTNVAITG-KGILEG 169
Query: 159 QGSV--WWDW--------------------------FSSQSL---------NYSRPHLVE 181
GS WW W + Q L NY RP ++
Sbjct: 170 GGSEQHWWPWKGPWKKSTWGDDPIENQKFTRDVLREMAEQELPVAQRVFKNNYLRPPFIQ 229
Query: 182 FISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIE 241
+ NV++ +T N+P + ++PV C NV ++NI H P + G P++ +V IE
Sbjct: 230 PYACINVLIEGVTIKNSPFWLVNPVLCKNVTVRNI--HCDSHGPNSDGCDPEACTDVLIE 287
Query: 242 DCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQ 301
+CI G D I++KSG + G G+P ++ I ++S G V GSE+SGG+ N+
Sbjct: 288 NCIFDTGDDCIAIKSGRNADGRRVGQPCENILINNCQMRSGHG-GVVIGSEISGGVRNLY 346
Query: 302 VEKIHLY--DSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA-----FGACGNCGSHPD 354
+ + D GI +T RGG+++ + D + + A + G+ G
Sbjct: 347 AQNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRDIRIGQVKEAVVINFYYEEGDVGKF-- 404
Query: 355 DDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 402
P ++ I +++ + T A + G P + + N+++
Sbjct: 405 -------TPVLEDINIENLYVEHATRAFSLRGYPHTPITGVSIKNLTI 445
>gi|424978123|ref|ZP_18391071.1| polygalacturonase [Enterococcus faecium P1123]
gi|402963044|gb|EJX79942.1| polygalacturonase [Enterococcus faecium P1123]
Length = 426
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 150/305 (49%), Gaps = 31/305 (10%)
Query: 61 QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDV 117
Q+ L+ D+G + +++P G +L G+ L L E+GAV+ G + +
Sbjct: 10 QDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPE 69
Query: 118 VDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD--W--------- 166
+D + G+E+ + +++N +D+++ G G IDGQG WW+ W
Sbjct: 70 IDTRVA---GVEM--KWPAAILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTR 123
Query: 167 --FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISV 218
+ + L + RP +E+VVV +L F + +N+ Y ++V ++ + +
Sbjct: 124 AEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVII 183
Query: 219 HAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVL 278
+ P T GI DSS NV + +C +A G D I++KSG D G R ++ + + R
Sbjct: 184 RNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK 242
Query: 279 LQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYN 338
++ SG V GSE+S G+S+V + I + S GI +++K RGG I I + + + +
Sbjct: 243 IR--SGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMID 300
Query: 339 INVAF 343
+ F
Sbjct: 301 VQFPF 305
>gi|423112756|ref|ZP_17100447.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
gi|376390250|gb|EHT02936.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
Length = 460
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 181/409 (44%), Gaps = 63/409 (15%)
Query: 43 ITEFGAVGDGK--TLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
IT +GA G LNT A Q AI A GG + VP G +LT L +++ L L
Sbjct: 38 ITHYGAEGHRLQIALNTDAIQKAI---DDCAAAGGGTVLVPKGNFLTNPLFLKNNIQLKL 94
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYM-------LRDVVVTGDN 153
EK A ++ S + + RG + RY NG++ ++V + G+
Sbjct: 95 EKDATLVASTEVAAY----------RGDD--KTRYAEAENGWLPFISIADAQNVAIVGE- 141
Query: 154 GTIDGQGSVWWDWF------SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
GTIDGQG+VWW+ + + + RP L+ + NV++ +T ++P++++ Y
Sbjct: 142 GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFHVVTRY 201
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
+V I + +P +P T I P S N+ I + I D I++K+ + G
Sbjct: 202 AHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDGV 261
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
+++I L+ G S+ GSE +GG++NV VE S+ GI ++ +G+GG ++
Sbjct: 262 -VDNIYIANNTLKQGRGISI--GSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVK 318
Query: 328 QIVISDAELYNINV--AFGACGNCG--------------------------SHPDDDFDP 359
IV + ++N+ V F A S P FD
Sbjct: 319 NIVYRNTRMHNVEVPLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDK 378
Query: 360 DALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLSINPG 407
P IT +++ T + A + G EAP + SN+++ + G
Sbjct: 379 YKTPHFSNITVENLTSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRG 427
>gi|361067449|gb|AEW08036.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155067|gb|AFG59698.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155071|gb|AFG59700.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Query: 241 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 300
EDC ++ G D I++KSGWDEYGI++ RP++++ +RR+ + S+ S +A GSE SGGI ++
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITI-STPFSGIAIGSETSGGIRDI 59
Query: 301 QVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
VE I +Y S GI +T GRGG IR I S L N+ GN G HPD ++P
Sbjct: 60 LVENISIYSSSVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 361 ALPAIDQITFKDIIGTNI 378
ALP + I +++G++I
Sbjct: 120 ALPVVGDIAVLNVVGSSI 137
>gi|373956691|ref|ZP_09616651.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373893291|gb|EHQ29188.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 474
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 193/438 (44%), Gaps = 49/438 (11%)
Query: 6 ALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIF 65
A+ L L C A I+ + + + + + + +GAV +G TLNT A Q AI
Sbjct: 12 AIFLTLNFC-AKAIDADPAWVKLVGSKKMPAKTTVFKVLAYGAVNNGTTLNTSAIQKAI- 69
Query: 66 YLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYG 125
+ + KGG + GK+LTGS L ++ L ++KG +LGSQN + +D +
Sbjct: 70 --DACSAKGGGIVSFAPGKYLTGSIFLKKNVRLQIDKGVELLGSQNLDDYPQMDTRIA-- 125
Query: 126 RGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNY----------- 174
GIE+ + +LIN +V VTG+ G ++ QG +WD + + Y
Sbjct: 126 -GIEM--KWPAALINIIDQENVAVTGE-GLVNAQGKPFWDKYWNMRKEYDPKGLRWIVDY 181
Query: 175 --SRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISV--HAPPESPYTVGI 230
RP + S N+ + +T A + + +Y V + I V + P T GI
Sbjct: 182 DAQRPRTLLISGSSNITIKAITLQQAGFWTVQVLYSKYVTVDGIIVRNNIDGHGPSTDGI 241
Query: 231 VPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFG 290
DSS V I++C I D LK+G D G+ +PT V I R + + G + G
Sbjct: 242 DVDSSTYVLIQNCDIDCNDDDFCLKAGRDWDGLRVNKPTEYVVI-RYCISRAGGGLLTLG 300
Query: 291 SEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCG 350
SE SGGI +V + + NG+ ++ RGG + I + + NI A N
Sbjct: 301 SETSGGIRHVLATNLSGNGTGNGLNIKSATTRGGTVEDIHFKNITMNNIGNAIQITMNWN 360
Query: 351 -----SHPDDDFDPDALPA-----IDQI--------TFKDIIGTNITIAG-----NFTGI 387
S D +D + +PA + + TFKD+ +NI I G N G+
Sbjct: 361 PAYSYSKLPDGYDINTVPAHWKKMLTHVEPAEKGIPTFKDVYISNINIKGAKKAINAVGM 420
Query: 388 QEAPFANICLSNISLSIN 405
Q P SN+++ N
Sbjct: 421 QGHPLVGFHFSNVNIEAN 438
>gi|317503775|ref|ZP_07961787.1| glycoside hydrolase [Prevotella salivae DSM 15606]
gi|315665072|gb|EFV04727.1| glycoside hydrolase [Prevotella salivae DSM 15606]
Length = 856
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 164/375 (43%), Gaps = 69/375 (18%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTL-NTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTG 88
+QP + R SV IT+FGA N A Q AI +L A +GG ++ VP+GKW TG
Sbjct: 35 EQPKIADR--SVVITKFGAKTTASAAQNQRAIQKAIAFL---ARQGGGKVVVPAGKWHTG 89
Query: 89 SFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVV 148
+ L+S + L + K A++ S + +V + G+ Y I + DVV
Sbjct: 90 ALRLSSGIELVVSKDALLQFVFERSLYPLV---KTSWEGMMCWN--YSPCIYSFGSDDVV 144
Query: 149 VTGDNGTIDGQGS--VWWDWFSSQSLNYS------------------------------- 175
V+G+ GTIDG GS WW + Y
Sbjct: 145 VSGE-GTIDGGGSNETWWPMCGKEVFGYVKGVTKEAQVLGSRRRLQQMAEDDVPWDERRF 203
Query: 176 ------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVG 229
RP L+ F+ V VS +T LN+P + IHP+ C NV + + + E P G
Sbjct: 204 GLGYGLRPQLINFVKGNRVRVSGVTLLNSPFWVIHPLQCKNVTVDGVKIWN--EGPNGDG 261
Query: 230 IVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAF 289
P++ +NV I++ G D I++KSG + G + +P+ ++ IRR +++ G +
Sbjct: 262 CDPEACENVLIQNTHFHTGDDCIAIKSGRNNDGRLWNQPSKNIIIRRCVMEDGHG-GIVI 320
Query: 290 GSEMSGGISNVQVEKI-----HLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFG 344
GSE+SGG NV E HL L +T RGG I I + V G
Sbjct: 321 GSEISGGCMNVFAEDCTMDSPHLDRVL---RIKTNNCRGGRIENINVR-------RVKVG 370
Query: 345 ACGNCGSHPDDDFDP 359
C + D++P
Sbjct: 371 QCKEAVVKINLDYEP 385
>gi|189462203|ref|ZP_03010988.1| hypothetical protein BACCOP_02885 [Bacteroides coprocola DSM 17136]
gi|189431106|gb|EDV00091.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 460
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 138/283 (48%), Gaps = 33/283 (11%)
Query: 74 GGAQLYVPSGKW-LTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPG 132
GG + + G + L G +L S + L L +GA + S S D + + + G EL G
Sbjct: 74 GGGTVKISEGHYFLNGPLHLKSDVNLNLAEGAYLQFSGKSS--DFLPVVLTRWEGTELYG 131
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYS----------------- 175
+ +I Y ++ +TG GTID QG + + +S N
Sbjct: 132 --HSPMIYAYHANNIAITG-KGTIDAQGGLEFAAWSKIEANDRDRLREMGDKLVPVHERI 188
Query: 176 -------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTV 228
RP ++ V++ +T ++P + IHPVYC NV ++ +++ + P
Sbjct: 189 FGEGTVLRPSCIQPYGCSRVLIEGITVKDSPFWTIHPVYCDNVIVRGVTIDS--HFPNND 246
Query: 229 GIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 288
G P+S+ NV IE+C G DAI++KSG D G GRP+ ++ IR + S + +
Sbjct: 247 GCDPESTTNVLIENCTFRTGDDAIAIKSGRDTDGRYIGRPSRNIVIRNCIFHSEC-NGLC 305
Query: 289 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVI 331
GSEMSGG S+V + I + N I F++ + RGGYIR +V+
Sbjct: 306 IGSEMSGGASDVYMNNIEIGTVKNAIYFKSNRDRGGYIRNVVV 348
>gi|261880664|ref|ZP_06007091.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332617|gb|EFA43403.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 851
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 172/402 (42%), Gaps = 66/402 (16%)
Query: 39 HSVSITEFGAVGDGKTL-NTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLT 97
SIT+FGA N A AI + KGG ++ VP G+WLTG+ + SH+
Sbjct: 42 REYSITQFGASPKASAAKNQKAINRAILMC---SKKGGGRIVVPRGEWLTGAIRMQSHVN 98
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
L +E+GA + + P + +V + GI Y I Y DV +TG GTID
Sbjct: 99 LVVEEGATLKFAFEPELYPLV---KTSWEGIGC--WNYSPCIYAYQATDVALTG-KGTID 152
Query: 158 GQGS--VWWDWF--------------------SSQSLNYS-----------------RPH 178
G GS WW +Q L Y+ R
Sbjct: 153 GNGSKQTWWPMCGAPRYGFVKGETKEAQNLGSRAQLLKYAENDVPWDQRKFGMGKGLRSQ 212
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
LV F+ S+ +++ +L +N+P + IHP+ N+ + + V + P G P++ D V
Sbjct: 213 LVNFVESDGILIKDLHLVNSPFWVIHPLLSKNITVDGVFVQN--DGPNGDGCDPEACDGV 270
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
I++C G D I++KSG + G + +P+ ++ IR + G V GSE+SGG
Sbjct: 271 LIQNCTFDTGDDCIAIKSGRNNDGRLWNKPSQNIIIRNCKMADGHG-GVVIGSEISGGCR 329
Query: 299 NVQVEKIHL----YDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPD 354
NV E ++ D + + +T RGG I I + NV G C +
Sbjct: 330 NVFAEDCYMDSPHLDRV--LRIKTNNCRGGLIENINMR-------NVTVGQCNEAVLRIN 380
Query: 355 DDFDP-DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
D++P + + T + + N+T + G+Q NI
Sbjct: 381 LDYEPREECYRGFEPTVRKVYMENVTSKESKYGVQIIGLNNI 422
>gi|157693735|ref|YP_001488197.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
gi|157682493|gb|ABV63637.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
Length = 463
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 151/322 (46%), Gaps = 46/322 (14%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++ +GA G L+T A Q+AI G ++ +P G ++TG+ L SH+ L L
Sbjct: 55 NVVHYGADAQGIELSTEAIQSAIDDAHRLK---GGRVLIPEGTFVTGALELKSHVELHLH 111
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
+ A + SQNP D + + + G+EL Y LI + ++ +TG GT+DG+G
Sbjct: 112 EKAYVSFSQNPK--DYLPLVLTRYEGVEL--YNYSPLIYAHHAENIAITG-AGTLDGRGD 166
Query: 162 V--WWDW-----------FSSQSL------------------NYSRPHLVEFISSENVVV 190
WW W Q L +Y R ++ + V++
Sbjct: 167 EHHWWPWKYGTNGQPSQERDRQLLFDMAEKRRPVEERVFGEGHYLRSSFIQPYQCQQVLI 226
Query: 191 SNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHD 250
+T ++P + IHPV +V ++ VH P T G+ P+S NV IEDC G D
Sbjct: 227 EGVTVKDSPMWQIHPVLSEHVIVR--GVHIIGHGPNTDGVNPESCRNVLIEDCYFDNGDD 284
Query: 251 AISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++KSG +E G G P+ ++ IRR ++ G V GSE+SGG+ V E ++ DS
Sbjct: 285 CIAIKSGRNEDGRRIGIPSENIVIRRNEMRDGHG-GVTIGSEISGGVRYVYAEN-NVMDS 342
Query: 311 LN---GIEFRTTKGRGGYIRQI 329
N + +T RGG I I
Sbjct: 343 PNLDRALRIKTNSVRGGTIEHI 364
>gi|407684232|ref|YP_006799406.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'English Channel 673']
gi|407245843|gb|AFT75029.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'English Channel 673']
Length = 488
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 176/393 (44%), Gaps = 69/393 (17%)
Query: 60 FQNAIFY-LKSFADKGGAQLYVPSGKWL-TGSFNLTSHLTLFLEKGAVILGSQNPSHWDV 117
F+ A+ + A +GG ++ VP G WL +G +L S++ L +E GA I S NP D
Sbjct: 85 FKQALHAAIDQVARQGGGKVVVPKGDWLCSGPIHLQSNINLHIEAGATIRFSTNPD--DY 142
Query: 118 VDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WWDW--------- 166
+ + G+EL G Y LI + ++ +TG GT+DG + WW W
Sbjct: 143 KPYVFTRWEGMELMG--YSPLIYAFEQSNIAITG-KGTLDGSAAKDNWWPWKGKWKASTW 199
Query: 167 ---------FSSQSL-----------------NYSRPHLVEFISSENVVVSNLTFLNAPA 200
++ +L NY RP ++ ENV++ +T L +P
Sbjct: 200 GDDPVENQKYTRDTLQEMVENGTPVSDRVFENNYLRPPFIQPYRCENVLIEGVTILRSPF 259
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+ ++PV C NV + + V+ P + G P+S NV I +C G D I++KSG +
Sbjct: 260 WLVNPVLCKNVTVND--VYCKSFGPNSDGCDPESCTNVLISNCTFDTGDDCIAIKSGRNA 317
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY--DSLNGIEFRT 318
G P +++ I +++ G V GSE+SGG+ N+ + + D GI +T
Sbjct: 318 DGRRVNVPCSNIVIEHCEMKAGHG-GVVIGSEISGGVENLYAQHCTMSSPDLDRGIRIKT 376
Query: 319 TKGRGGYIRQI--------VISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITF 370
RGG+++ + + DA + N F G+ G+ P P ++ IT
Sbjct: 377 NSIRGGHLKNLNYRNIDIGTVKDAVVVNF---FYEEGDAGNFP---------PLLEDITI 424
Query: 371 KDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
+++ + A G P + + L+NI++
Sbjct: 425 ENLNVASANRAFVLRGYDHTPISGLTLNNITIK 457
>gi|423229002|ref|ZP_17215407.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei CL02T00C15]
gi|423244841|ref|ZP_17225915.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei CL02T12C06]
gi|392634755|gb|EIY28667.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei CL02T00C15]
gi|392641228|gb|EIY35012.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei CL02T12C06]
Length = 1095
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 167/367 (45%), Gaps = 42/367 (11%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I E+G G+G + T Q I A GG + +P+G++L+G+ + L +E
Sbjct: 709 NIKEYGVKGNGYS-ETATLQRII---NEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIE 764
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
K A ++ + +P+ + V+ P+ GIE +R++ + D V G IDG+G
Sbjct: 765 KNAKLISTVDPNEFPVI---PTRFEGIE---KRWRCAFLNFDHSDGVKVYGEGVIDGKGV 818
Query: 162 VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
+W N RP LV F +S L +N ++ +H +Y + I I + A
Sbjct: 819 ---EWKKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 875
Query: 222 PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQS 281
P + GI DSS+++ I I D IS+KSG DE G GRP+ ++ I
Sbjct: 876 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 935
Query: 282 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG--IEFRTTKGRGGYIRQIVISD------ 333
G VA GSE+SG I NV + L D+ N + F++ RGG + I D
Sbjct: 936 GHG-GVAMGSEISGDIRNVTIRSC-LMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGA 993
Query: 334 AELYNINVAFGACGNCGSHPDDDFDPDALPA------IDQITFKDIIGTNITIAGNFTGI 387
+++IN+ + P LPA + I FK+I G + AG G
Sbjct: 994 RSIFDINMEWRMV------------PPLLPAHYPLTCLRNIHFKNINGEAQS-AGTMYGF 1040
Query: 388 QEAPFAN 394
+EAPF N
Sbjct: 1041 KEAPFGN 1047
>gi|325298060|ref|YP_004257977.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324317613|gb|ADY35504.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 462
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 170/387 (43%), Gaps = 42/387 (10%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW-LTGSFNLTSHLTLFLE 101
IT FGA GDGK AF A +K A GGA + VP+G++ L G + S++ L L+
Sbjct: 50 ITSFGAKGDGKKDCKPAFDKA---MKRAAKSGGAHIVVPAGEYKLNGPIHFVSNVCLELQ 106
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQ-G 160
+GAV+ + P ++ + + + G L + Y I GY L ++ + G GTIDG G
Sbjct: 107 EGAVLKFAPEPEYY--LPLVKTSWEGTFL--QNYSPFIYGYQLENISIIG-KGTIDGNAG 161
Query: 161 SVWWDWFSSQSLN-----------------------YSRPHLVEFISSENVVVSNLTFLN 197
S + W S Q Y RP L++F + +N+ + + N
Sbjct: 162 STFATWKSQQKKGQQLSRDMNHNETPVEERNFGEGYYLRPQLIQFFACKNITLEGVFITN 221
Query: 198 APAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSG 257
+P + IH + N+ + + A + GI P+ + N+ IE+ G D +++K G
Sbjct: 222 SPFWCIHLLKSENIICRGLRYDAKLVN--NDGIDPEFTRNLLIENIEFNNGDDNVAIKCG 279
Query: 258 WDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN-GIEF 316
D G RP+ ++ IR + G V GSEMS G+ NV +E GI
Sbjct: 280 RDNDGWTTARPSENIIIRNCKFKGLHG--VVLGSEMSAGVQNVFIENCTYGGYCKRGIYI 337
Query: 317 RTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGT 376
+T RGG+IR I +++ + F A + + D + I KD+
Sbjct: 338 KTNPDRGGFIRNIYVNNCRFGEVEDLFYA---TSMYAGEGMDNTHFTEVHDIYVKDVTCQ 394
Query: 377 NITIAG-NFTGIQEAPFANICLSNISL 402
+ A G P N+ N+++
Sbjct: 395 KASAAALVLQGTTVKPIYNVRFENVNV 421
>gi|212690884|ref|ZP_03299012.1| hypothetical protein BACDOR_00372 [Bacteroides dorei DSM 17855]
gi|345512466|ref|ZP_08791992.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|212666566|gb|EEB27138.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438023|gb|EEO48100.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
Length = 1095
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 167/367 (45%), Gaps = 42/367 (11%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I E+G G+G + T Q I A GG + +P+G++L+G+ + L +E
Sbjct: 709 NIKEYGVKGNGYS-ETATLQRII---NEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIE 764
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
K A ++ + +P+ + V+ P+ GIE +R++ + D V G IDG+G
Sbjct: 765 KNAKLISTVDPNEFPVI---PTRFEGIE---KRWRCAFLNFDHSDGVKVYGEGVIDGKGV 818
Query: 162 VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
+W N RP LV F +S L +N ++ +H +Y + I I + A
Sbjct: 819 ---EWKKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 875
Query: 222 PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQS 281
P + GI DSS+++ I I D IS+KSG DE G GRP+ ++ I
Sbjct: 876 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 935
Query: 282 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG--IEFRTTKGRGGYIRQIVISD------ 333
G VA GSE+SG I NV + L D+ N + F++ RGG + I D
Sbjct: 936 GHG-GVAMGSEISGDIRNVTIRSC-LMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGA 993
Query: 334 AELYNINVAFGACGNCGSHPDDDFDPDALPA------IDQITFKDIIGTNITIAGNFTGI 387
+++IN+ + P LPA + I FK+I G + AG G
Sbjct: 994 RSIFDINMEWRMV------------PPLLPAHYPLTCLRNIHFKNINGEAQS-AGTMYGF 1040
Query: 388 QEAPFAN 394
+EAPF N
Sbjct: 1041 KEAPFGN 1047
>gi|69249564|ref|ZP_00605017.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|389869657|ref|YP_006377080.1| glycosyl hydrolase [Enterococcus faecium DO]
gi|68194111|gb|EAN08650.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|388534906|gb|AFK60098.1| glycosyl hydrolase [Enterococcus faecium DO]
Length = 317
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 155/317 (48%), Gaps = 37/317 (11%)
Query: 55 LNTLAF------QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
+N L F Q+ L+ D+G + +++P G +L G+ L L E+GAV
Sbjct: 8 INALNFKTNDTQQDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAV 67
Query: 106 ILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD 165
+ G + + +D + G+E+ + +++N +D+++ G G IDGQG WW+
Sbjct: 68 LKGRTDIEAFPEIDTRVA---GVEM--KWPAAILNVLSAKDILIEG-KGIIDGQGDHWWE 121
Query: 166 --W-----------FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
W + + L + RP +E+VVV +L F + +N+
Sbjct: 122 LYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQIT 181
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y ++V ++ + + + P T GI DSS NV + +C +A G D I++KSG D G
Sbjct: 182 YSNDVLVEKVIIR-NNDGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVN 240
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
R ++ + + R ++ SG V GSE+S G+S+V + I + S GI +++K RGG I
Sbjct: 241 RKSSRIEVARCKIR--SGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVI 298
Query: 327 RQIVISDAELYNINVAF 343
I + + + +++ F
Sbjct: 299 ENIRVENLNMIDVHFLF 315
>gi|237712628|ref|ZP_04543109.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229453949|gb|EEO59670.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 478
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 167/367 (45%), Gaps = 42/367 (11%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I E+G G+G + T Q I A GG + +P+G++L+G+ + L +E
Sbjct: 92 NIKEYGVKGNGYS-ETATLQRII---NEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIE 147
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
K A ++ + +P+ + V+ P+ GIE +R++ + D V G IDG+G
Sbjct: 148 KNAKLISTVDPNEFPVI---PTRFEGIE---KRWRCAFLNFDHSDGVKVYGEGVIDGKGV 201
Query: 162 VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
+W N RP L+ F +S L +N ++ +H +Y + I I + A
Sbjct: 202 ---EWKKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 258
Query: 222 PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQS 281
P + GI DSS+++ I I D IS+KSG DE G GRP+ ++ I
Sbjct: 259 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 318
Query: 282 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLN--GIEFRTTKGRGGYIRQIVISD------ 333
G VA GSE+SG I NV + L D+ N + F++ RGG + I D
Sbjct: 319 GHG-GVAMGSEISGDIRNVTIRSC-LMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGA 376
Query: 334 AELYNINVAFGACGNCGSHPDDDFDPDALPA------IDQITFKDIIGTNITIAGNFTGI 387
+++IN+ + P LPA + I FK+I G + AG G
Sbjct: 377 RSIFDINMEWRMV------------PPLLPAHYPLTCLRNIHFKNINGEAQS-AGTMYGF 423
Query: 388 QEAPFAN 394
+EAPF N
Sbjct: 424 KEAPFGN 430
>gi|313221288|emb|CBY32045.1| unnamed protein product [Oikopleura dioica]
Length = 278
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 124/225 (55%), Gaps = 9/225 (4%)
Query: 78 LYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRR-- 134
+Y P+ K S L S+LTL KG I+ S N + ++ LPSY + L +
Sbjct: 55 VYFPAEKIEIASLELRSNLTLNFPKGCEIIASANEDDYQIMPTLPSYCIARDGLAASKDA 114
Query: 135 -YKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNL 193
Y+S+ G + +VV TG+ G I+G+G WW +SQ+L + RP L + + +N + L
Sbjct: 115 LYRSVFYGENVENVVFTGE-GLINGEGVNWWTR-NSQNLKFERPRLFQCLFCKNFKIEKL 172
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
T+ N+P + IH VY N+ I ++++ A ES T GI DSS NV I D + +G D I+
Sbjct: 173 TWKNSPFWTIHFVYSENIEIADVAILAEHESRNTDGIDIDSSSNVHIHDVFVDVGDDVIA 232
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
LKSG+D G +G PT +V + + + A GSEMSGG+
Sbjct: 233 LKSGFDFCGREFGMPTKNVLVENSVF---INENFAIGSEMSGGVQ 274
>gi|383752964|ref|YP_005431867.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365016|dbj|BAL81844.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 494
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 170/385 (44%), Gaps = 54/385 (14%)
Query: 59 AFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVV 118
A Q AI A GG ++ +P+G W TG+ L SH+ L L GA + +N S +V
Sbjct: 84 AIQQAI---DDMAQAGGGRVEIPAGIWYTGALELKSHVELHLVAGARLCFIRNKS--NVF 138
Query: 119 DPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WWDW---------- 166
PL Y R + + I D+ +TG GT+DGQ W W
Sbjct: 139 YPL-RYTRWEGVECMNFSPFIYAEGAEDISITG-QGTLDGQADEFNWMPWKFGYFGEPDQ 196
Query: 167 --------------------FSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
+ ++ RP ++F +S+++ + + +N+P + I+PV
Sbjct: 197 EEQRQRLFRAGAEGIPVQQRIFADDVSTLRPPFIQFYNSKDIRIMGVHIVNSPFWEINPV 256
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
C NV I+ VH + GI P+SS NV IEDC G D I++KSG +E G G
Sbjct: 257 LCENVWIK--GVHIETDLYNNDGIDPESSRNVLIEDCYFLTGDDCIAIKSGRNEDGRRIG 314
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN---GIEFRTTKGRG 323
PT +V IR + G + GSE+SGG+ +V H +DS N I F+T RG
Sbjct: 315 VPTANVIIRHNRFANGHG-GITLGSEISGGVHDVFATGNH-FDSPNLDYPIRFKTNAMRG 372
Query: 324 GYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQIT---FKDIIGTNITI 380
G + + + D+ +N A A + ++ + LP +D IT F G +I
Sbjct: 373 GTLENVYVKDSV---VNKARLAVVHADFFYEEGHAGENLPQLDNITLDGFWTAEGGSIDA 429
Query: 381 AGNF--TGIQEAPFANICLSNISLS 403
F G +A N+ ++ L
Sbjct: 430 KYAFYLKGFADALIENVTFRDMKLE 454
>gi|407688164|ref|YP_006803337.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291544|gb|AFT95856.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 488
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 175/393 (44%), Gaps = 69/393 (17%)
Query: 60 FQNAIFY-LKSFADKGGAQLYVPSGKWL-TGSFNLTSHLTLFLEKGAVILGSQNPSHWDV 117
F+ A+ + A +GG ++ VP G WL +G +L S++ L +E GA I S NP D
Sbjct: 85 FKQALHAAIDQVARQGGGKVVVPKGDWLCSGPIHLQSNINLRIEAGATIRFSTNPE--DY 142
Query: 118 VDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WWDW--------- 166
+ + G+EL G Y LI + ++ +TG GT+DG + WW W
Sbjct: 143 KPYVFTRWEGMELMG--YSPLIYAFEQSNIAITG-KGTLDGSAAKDNWWPWKGKWKASTW 199
Query: 167 ---------FSSQSL-----------------NYSRPHLVEFISSENVVVSNLTFLNAPA 200
++ +L NY RP ++ ENV++ +T L +P
Sbjct: 200 GDDPVENQKYTRDTLQEMVENGTPVSDRVFENNYLRPPFIQPYRCENVLIEGVTILRSPF 259
Query: 201 YNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDE 260
+ ++PV C NV + + V+ P + G P+S NV I +C G D I++KSG +
Sbjct: 260 WLVNPVLCKNVTVND--VYCKSFGPNSDGCDPESCTNVLISNCTFDTGDDCIAIKSGRNA 317
Query: 261 YGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY--DSLNGIEFRT 318
G P +++ I +++ G V GSE+SGG+ N+ + + D GI +T
Sbjct: 318 DGRRVNVPCSNIVIEHCEMKAGHG-GVVIGSEISGGVENLYAQHCTMSSPDLDRGIRIKT 376
Query: 319 TKGRGGYIRQI--------VISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITF 370
RGG+++ + + DA + N F G+ G P P ++ IT
Sbjct: 377 NSIRGGHLKNLNYRNIDIGTVKDAVVVNF---FYEEGDAGKFP---------PLLEDITI 424
Query: 371 KDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
+++ + A G P + + L+NI++
Sbjct: 425 ENLNVASANRAFVLRGYDHTPISGLTLNNITIK 457
>gi|423239843|ref|ZP_17220958.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei CL03T12C01]
gi|392645468|gb|EIY39195.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei CL03T12C01]
Length = 1095
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 167/367 (45%), Gaps = 42/367 (11%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I E+G G+G + T Q I A GG + +P+G++L+G+ + L +E
Sbjct: 709 NIKEYGVKGNGYS-ETATLQRII---NEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIE 764
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
K A ++ + +P+ + V+ P+ GIE +R++ + D V G IDG+G
Sbjct: 765 KNAKLISTVDPNEFPVI---PTRFEGIE---KRWRCAFLNFDHSDGVKVYGEGVIDGKGV 818
Query: 162 VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
+W N RP LV F +S L +N ++ +H +Y + I I + A
Sbjct: 819 ---EWKKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 875
Query: 222 PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQS 281
P + GI DSS+++ I I D IS+KSG DE G GRP+ ++ I
Sbjct: 876 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 935
Query: 282 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG--IEFRTTKGRGGYIRQIVISD------ 333
G VA GSE+SG I NV + L D+ N + F++ RGG + I D
Sbjct: 936 GHG-GVAMGSEISGDIRNVTIRSC-LMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGA 993
Query: 334 AELYNINVAFGACGNCGSHPDDDFDPDALPA------IDQITFKDIIGTNITIAGNFTGI 387
+++IN+ + P LPA + I FK+I G + AG G
Sbjct: 994 RSIFDINMEWRMV------------PPLLPAHYPLTCLRNIHFKNINGEAQS-AGTMYGF 1040
Query: 388 QEAPFAN 394
+EAPF N
Sbjct: 1041 KEAPFGN 1047
>gi|255642114|gb|ACU21323.1| unknown [Glycine max]
Length = 203
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 79/108 (73%)
Query: 168 SSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
SS + ++RP+L+E + S+N+ +SNLT LN+P++N+HPVY SN+ +Q I+++AP SP T
Sbjct: 92 SSLTRRHTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPNT 151
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
GI PDS NV IEDC I G D +++KSGWDEYGI +G PT + I
Sbjct: 152 DGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIE 199
>gi|421078108|ref|ZP_15539067.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
gi|392523693|gb|EIW46860.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
Length = 453
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 161/350 (46%), Gaps = 58/350 (16%)
Query: 32 PTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFN 91
P PR V +T+FGAVGDG T AF+ + + GG ++ VP+G +LTG +
Sbjct: 30 PPTFPRRDFV-VTDFGAVGDGIMDCTDAFRRVMMAANT---AGGGRVVVPAGIYLTGPIH 85
Query: 92 LTSHLTLFLEKGAVILGSQNPSHWDVVDPLP---SYGRGIELPGRRYKSLINGYMLRDVV 148
S++ L++ K A + SQ D+ LP + G+EL Y LI Y ++
Sbjct: 86 FKSNVNLYVSKEATVKFSQ-----DLEKYLPMVLNRFEGVEL--YNYSPLIYSYGAVNIA 138
Query: 149 VTGDNGTIDGQG--SVWWDW----------------------FSSQSLN----------- 173
+TG+ G +DG G WW W F+ N
Sbjct: 139 ITGE-GILDGNGDNEHWWPWKGLTQYGWQEGQAHQAEDRDVLFAMAEQNVPVEERKFGSG 197
Query: 174 -YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVP 232
Y RP ++F +S+N+++ +T ++P + I PV C N+ I + + P T G P
Sbjct: 198 HYLRPSFIQFYNSKNILIEGITVKDSPMWQISPVLCENITIDKVKIVG--HGPNTDGFNP 255
Query: 233 DSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSE 292
DS N+ I++C G D I++KSG + G P ++ I+ ++ G + GSE
Sbjct: 256 DSCKNILIKNCYFNNGDDCIAIKSGRNGDGRRINIPCENIVIQNNYMKDGHG-GITIGSE 314
Query: 293 MSGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAELYNI 339
+SG + NV + ++ DS N + F+T RGG I I + + +I
Sbjct: 315 ISGSVRNVFADH-NVMDSPNLDRALRFKTNSVRGGIIENIYFKNTTVKSI 363
>gi|150002783|ref|YP_001297527.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|294777287|ref|ZP_06742742.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149931207|gb|ABR37905.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|294448907|gb|EFG17452.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 1095
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 160/355 (45%), Gaps = 18/355 (5%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I E+G G+G + T Q I GG + +P+G++L+G+ + L +E
Sbjct: 709 NIKEYGVKGNGYS-ETATLQRII---NEAVHNGGGTIVIPAGEYLSGALFFPRGVDLRIE 764
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
K A ++ + +P+ + V+ P+ GIE +R++ + D V G IDG+G
Sbjct: 765 KNAKLISTVDPNEFPVI---PTRFEGIE---KRWRCAFLNFDHSDGVKVYGEGVIDGKGV 818
Query: 162 VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
+W N RP L+ F +S L +N ++ +H +Y + I I + A
Sbjct: 819 ---EWKKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 875
Query: 222 PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQS 281
P + GI DSS+++ I I D IS+KSG DE G GRP+ ++ I
Sbjct: 876 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 935
Query: 282 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG--IEFRTTKGRGGYIRQIVISDAELYNI 339
G VA GSE+SGGI NV + L D+ N + F++ RGG + I D +
Sbjct: 936 GHG-GVAMGSEISGGIRNVTIRSC-LMDNENWSPLRFKSQPSRGGTVENITFEDITIKGA 993
Query: 340 NVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFAN 394
F P L + I FK+I G + AG G +EAPF N
Sbjct: 994 RSIFDINMEWRMVPPLSPAHYPLTCLRNIHFKNINGEAQS-AGTMYGFKEAPFGN 1047
>gi|407700483|ref|YP_006825270.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Black Sea 11']
gi|407249630|gb|AFT78815.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Black Sea 11']
Length = 488
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 198/457 (43%), Gaps = 82/457 (17%)
Query: 3 MPVALLLLLALCSAILINGEVS---DGQCDDQPTLDPRP----HSVSITEFGAVGDGKTL 55
M V + L+ C+ ++ G D + + + RP ++ +F A+ +
Sbjct: 27 MAVGVPTFLSGCANVVETGRTQRQWDAEANLIKGMVTRPSFAKRQANVVDFLAIHNND-- 84
Query: 56 NTLAFQNAIF-YLKSFADKGGAQLYVPSGKWL-TGSFNLTSHLTLFLEKGAVILGSQNPS 113
F+ A+ + A +GG ++ VP G WL G +L S++ L +E GA I S NP
Sbjct: 85 ----FKQALHDAISQIASQGGGKVVVPKGNWLCKGPIHLQSNINLHVELGATIQFSTNPD 140
Query: 114 HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WWDW----- 166
D + + G+EL G Y LI Y ++ +TG GT+DG + WW W
Sbjct: 141 --DYKPYVFTRWEGMELMG--YSPLIYAYEQTNIAITG-KGTLDGCAAKDNWWPWKGKWK 195
Query: 167 -------------FSSQSL-----------------NYSRPHLVEFISSENVVVSNLTFL 196
++ +L NY RP ++ ENV++ +T L
Sbjct: 196 ASTWGDDPVENQKYTRDTLQEMVERGTPVSERVFEKNYLRPPFIQPYRCENVLIEGVTIL 255
Query: 197 NAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKS 256
+P + ++PV C NV + + V+ P + G P+S NV I +C G D I++KS
Sbjct: 256 RSPFWLVNPVLCKNVTVND--VYCKSFGPNSDGCDPESCTNVIISNCTFDTGDDCIAIKS 313
Query: 257 GWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY--DSLNGI 314
G + G P +++ I +++ G V GSE+SGG+ N+ + + D GI
Sbjct: 314 GRNADGRRVNVPCSNIIIEHCEMKAGHG-GVVIGSEISGGVENLYAQYCTMSSPDLDRGI 372
Query: 315 EFRTTKGRGGYIRQI--------VISDAELYNINVAFGACGNCGSHPDDDFDPDALPAID 366
+T RGG+++ + + DA + N F G+ G+ P P ++
Sbjct: 373 RIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNF---FYEEGDAGNFP---------PLLE 420
Query: 367 QITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
IT +++ + A G P + + L+N+++
Sbjct: 421 DITIENLNVVSANRAFVLRGYDHTPISGLTLNNVTIK 457
>gi|319643150|ref|ZP_07997780.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520559|ref|ZP_08799946.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835079|gb|EET15388.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385228|gb|EFV66177.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 1095
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 160/355 (45%), Gaps = 18/355 (5%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I E+G G+G + T Q I A GG + +P+G++L+G+ + L +E
Sbjct: 709 NIKEYGVKGNGYS-ETATLQRII---NEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIE 764
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
K A ++ + +P+ + V+ P+ GIE +R++ + D V G IDG+G
Sbjct: 765 KNAKLISTVDPNEFPVI---PTRFEGIE---KRWRCAFLNFDHSDGVKVYGEGVIDGKGV 818
Query: 162 VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
+W N RP L+ F +S L +N ++ +H +Y + I I + A
Sbjct: 819 ---EWKKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 875
Query: 222 PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQS 281
P + GI DSS+++ I I D IS+KSG DE G GRP+ ++ I
Sbjct: 876 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 935
Query: 282 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG--IEFRTTKGRGGYIRQIVISDAELYNI 339
G VA GSE+SGGI NV + L D+ N + F++ RGG + I D +
Sbjct: 936 GHG-GVAMGSEISGGIRNVTIRSC-LMDNENWSPLRFKSQPSRGGTVENITFEDITIKGA 993
Query: 340 NVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFAN 394
F P L + I FK+I G + AG G +E PF N
Sbjct: 994 RSIFDINMEWRMVPPLSPAHYPLTCLRNIHFKNINGEAQS-AGTMYGFKETPFGN 1047
>gi|375144674|ref|YP_005007115.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361058720|gb|AEV97711.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 433
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 152/314 (48%), Gaps = 36/314 (11%)
Query: 8 LLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYL 67
+++L +C IL+ V+ T + +I E GA GDGKTLNT Q +
Sbjct: 5 IVVLFVCGCILLTRGVAQ-------TGNANTARYNIAEQGAQGDGKTLNTQKIQ---LVI 54
Query: 68 KSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRG 127
A KGG + +P G +++G+ L + L L++GAV+ GS N +D P
Sbjct: 55 DGCAQKGGGTVVIPKGVFVSGALFLKRGVNLELQEGAVLKGSTN------IDDYPKLNTR 108
Query: 128 IELPGRRYK-SLINGYMLRDVVVTGDNGTIDGQGSVWWDWF--------SSQSLNYSRPH 178
IE ++ +LING L V +TG +G +DG G +W F + +LN RP
Sbjct: 109 IEGHFEPWRVALINGDSLEHVRITG-SGILDGSGEPFWKEFYARRDADNKTTNLNVERPR 167
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP------ESPYTVGIVP 232
L S++V++S +TFLN+ +N+H C +V + HAP ++P + GI
Sbjct: 168 LTFIQHSKDVLISGITFLNSGFWNLHLYACQDVTVDYCRFHAPSGPKPYHQAPSSDGIDV 227
Query: 233 DSSDNVCIEDCIIAMGHDAISLKSGWDEYGI--AYGRPTTDVHIRRVLLQSSSGSSVAFG 290
D S + I ++G D I+LK + + RP ++ I + + + G V FG
Sbjct: 228 DCSQRIFIRHSFFSVGDDCIALKGSKGPFAMQDQSSRPVENIEISDCIFE-AGGGIVTFG 286
Query: 291 SEMSGGISNVQVEK 304
SE + + NV +++
Sbjct: 287 SEAT-IVRNVTIQR 299
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 115/233 (49%), Gaps = 24/233 (10%)
Query: 34 LDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLT 93
L+ R HS +T FGA+GDGK NT AF+ AI L A GG QL VP G WLTGSFNLT
Sbjct: 843 LNCRKHSAVLTNFGAIGDGKPSNTKAFREAISKLTPLAADGGVQLIVPPGSWLTGSFNLT 902
Query: 94 SHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDN 153
SH TLF+++GA IL SQ+ S + ++ PLPSYG R+ L+ G L DVV+T +
Sbjct: 903 SHFTLFIQQGATILASQDESEYPMIPPLPSYGDA------RFTGLVYGSNLTDVVIT-EV 955
Query: 154 GTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNL--TFLNAPAYNIHPV----- 206
I+ Q ++ R ++ I + + + F +Y +HPV
Sbjct: 956 TLINTQSAI------RIKTAIGRGGYIKDIFARRFTMKTMKYVFWMTGSYKLHPVGGFDP 1009
Query: 207 ----YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLK 255
SN+H ++++ S I +C+ IA+ D L+
Sbjct: 1010 KALPEISNIHYRDMTAENVTISAKLERIKNGPFTGLCMSSVTIALSPDPKKLQ 1062
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 297 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDD 356
+++V + ++ L ++ + I +T GRGGYI+ I + + F G+ HP
Sbjct: 947 LTDVVITEVTLINTQSAIRIKTAIGRGGYIKDIFARRFTMKTMKYVFWMTGSYKLHPVGG 1006
Query: 357 FDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYN-SWECS 415
FDP ALP I I ++D+ N+TI+ I+ PF +C+S+++++++P W C+
Sbjct: 1007 FDPKALPEISNIHYRDMTAENVTISAKLERIKNGPFTGLCMSSVTIALSPDPKKLQWNCT 1066
Query: 416 NIHGSSESVFPEPCPELENSSSNSSSTC 443
++ G + V PEPC L + + S C
Sbjct: 1067 DVSGVTSRVTPEPCSLLPDKRTTMDSDC 1094
>gi|374312327|ref|YP_005058757.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358754337|gb|AEU37727.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 543
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 187/429 (43%), Gaps = 68/429 (15%)
Query: 31 QPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSF 90
Q +DPR + GA GDG TLNT A Q A+ A GG + +P G +L+G
Sbjct: 27 QKFVDPR-------DTGARGDGHTLNTNALQKAV---DQAAAAGGGVVVIPPGDFLSGGL 76
Query: 91 NLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYML------ 144
L SH+TL LE GA++ GS ++ PG + NG+ L
Sbjct: 77 VLRSHVTLHLEAGAILRGSPRVEDYEY------------RPGPPVEGDSNGHHLLFALDA 124
Query: 145 RDVVVTGDNGTIDGQGSVWWD------------WFSSQSLNYS-----RPH-LVEFISSE 186
D+ +TG +GTIDG GS +W W + +Y RP ++E
Sbjct: 125 EDIAITG-HGTIDGGGSAFWHRKGRSTPRPEDLWGDVIAWDYEPATPRRPSPMIELARCR 183
Query: 187 NVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIA 246
NV + +T NAP + + PV C V I+ I V P +P T G+ + NV + DC IA
Sbjct: 184 NVRIEGVTLTNAPGWTLRPVACETVLIRGIRVRNPIYAPNTDGMDITACRNVFVSDCDIA 243
Query: 247 MGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIH 306
G DAI +KS + YG PT ++ + +L S+ + G+ G + N+
Sbjct: 244 TGDDAICIKS-ENPYGELL--PTKNITVTNCVL-STCCNGFKVGTSTHGRVENIVFSNSV 299
Query: 307 LY-DSLNGIEFRTTKG------RGGYIRQIVISDAELYNINVA-FGACGNCGSHPDDDFD 358
+Y +S + R T G GG + ++IS+ ++ N F G
Sbjct: 300 IYNESTTPLNERATSGIALEVVDGGSMSGVLISNIQMENARTPLFVRLGR--------RK 351
Query: 359 PDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIH 418
P + I F+ I T + + TG+ + P ++ ++N S ++ +W + I
Sbjct: 352 PAQGSFLRGIRFEQIHATGALLTSSITGLPDMPVEDVVIANSSFRMSEHGSAAWTHAEIP 411
Query: 419 GSSESVFPE 427
+E +PE
Sbjct: 412 EYAER-YPE 419
>gi|313236094|emb|CBY11419.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 113/201 (56%), Gaps = 9/201 (4%)
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRR---YKSLINGYMLRDVVVTGDNGTID 157
KG I+ S N + ++ LPSY + L + Y+S+ G + +VV TG+ G I+
Sbjct: 5 KGCEIIASANEDDYQIMPTLPSYCIARDGLAASKDALYRSVFYGEYVENVVFTGE-GLIN 63
Query: 158 GQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNIS 217
G+G WW +SQ+L + RP L + + +N + LT+ N+P + IH VY N+ I +++
Sbjct: 64 GEGENWWTR-NSQNLKFERPRLFQCLFCKNFKIEKLTWKNSPFWTIHFVYSENIEIADVA 122
Query: 218 VHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRV 277
+ A ES T GI DSS NV I D I +G D I+LKSG+D G +G PT +V +
Sbjct: 123 ILAEHESRNTDGIDIDSSSNVHIHDVFIDVGDDVIALKSGFDFCGREFGMPTKNVLVENS 182
Query: 278 LLQSSSGSSVAFGSEMSGGIS 298
+ + + A GSEMSGG+
Sbjct: 183 VFIN---ENFAIGSEMSGGVQ 200
>gi|317474838|ref|ZP_07934108.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
gi|316908976|gb|EFV30660.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
Length = 492
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 160/366 (43%), Gaps = 41/366 (11%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGA-VILGSQNPSHWDVVDPLPSYG 125
++ + +GG + +P+GKWL+G L S + L + +GA ++ G D + + +
Sbjct: 49 IEQLSSQGGGTVIIPAGKWLSGRIELKSFVELHIARGAEIVFGG---CAEDYLPAVFTRH 105
Query: 126 RGIELPGRRYKSLINGYMLRDVVVTGD----------------NGTIDGQGSVWWDWFSS 169
G+E+ G + I ++ +TG+ NG + + WD
Sbjct: 106 EGVEIMGP--GAFIYANNQENIAITGEGRILGPDMDAEIRKRPNGASVVEKDIPWDMPVE 163
Query: 170 QSL-------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
Q + + RP + I+ NV++ +T + +N+ P+YC NV I+ I+V++
Sbjct: 164 QRIYDGMDGRTFYRPKTISPINCRNVLIEGITMERSTLWNVVPIYCENVIIRGITVNST- 222
Query: 223 ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS 282
E P GI +S N+ IE C + G D +LK+G + G+ G+ T +V IR L Q
Sbjct: 223 EVPSGDGIDIESCKNILIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRHSLAQHG 282
Query: 283 SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA 342
G + GSE +G I N+ V + GI F+T + RGG + + N+ A
Sbjct: 283 HG-GITIGSETAGMIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSNHTIYERLRMINVGKA 341
Query: 343 F--GACGN-------CGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
F GN +P+ D P I KD I + GI E PF+
Sbjct: 342 FTWDLLGNAYYMGELAARYPERAVD-HLTPNISNTVIKDFIVESSKQFFTANGIPEIPFS 400
Query: 394 NICLSN 399
N + N
Sbjct: 401 NTLIEN 406
>gi|374376177|ref|ZP_09633835.1| Polygalacturonase [Niabella soli DSM 19437]
gi|373233017|gb|EHP52812.1| Polygalacturonase [Niabella soli DSM 19437]
Length = 437
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 176/397 (44%), Gaps = 65/397 (16%)
Query: 38 PH----SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADK-GGAQLYVPSGKWLTGSFNL 92
PH SI +FGA+ + T NT Q AI ADK GG + +P G +L G
Sbjct: 32 PHISGKKFSIKDFGAIANNSTDNTGVIQQAI----DAADKAGGGTVIIPPGIYLCGPLQF 87
Query: 93 TSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGD 152
S L ++ GAV+ + P+ Y G + I+G L DV +TG
Sbjct: 88 KSSLNFRIDSGAVLR----------LLPMDRYPGGT----KSGTDFISGSKLHDVAITG- 132
Query: 153 NGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNI--HPVYCSN 210
+GTIDGQG+ WW + + + RP ++ + E +++ +T +NAP ++I +N
Sbjct: 133 SGTIDGQGAPWWPAYKDKGV--KRPRMIALQNCERLLIRGVTLMNAPMFHIAISGKATNN 190
Query: 211 VHIQNISVHAP----PESP-YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAY 265
V + ++V AP P +P + S + + I+DC I+ G D + G
Sbjct: 191 VTVDKVTVRAPASDDPLNPSHNTDACDVSGNKILIKDCDISTGDDNFTCGGG-------- 242
Query: 266 GRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGY 325
T++VHI+ + G ++ GS GG+SN +E ++ GI ++ + RGG
Sbjct: 243 ---TSNVHIQNC--KYGYGHGLSIGSYTKGGVSNFLIEDCSFTNTECGIRIKSDRDRGGV 297
Query: 326 IRQIVISDAELYNINVAFGACGNCGSHPDD-----DFDP------------DALPAIDQI 368
++ + + ++ N+ + G + + P D P I
Sbjct: 298 VQNLTYRNIKMENVGMPILIYGAYMAKEKEFRNLQKITPEIAAGYAREPLTDLTPVYKDI 357
Query: 369 TFKDIIGT--NITIAGNFTGIQEAPFANICLSNISLS 403
TF++I T N AG G+ EAP +NI ++++
Sbjct: 358 TFENITATTQNGKRAGLIWGLPEAPASNIVFKKVTIT 394
>gi|332533447|ref|ZP_08409312.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037156|gb|EGI73613.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 474
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 185/410 (45%), Gaps = 73/410 (17%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I +FGA +G+ T A +AI ++ +GG Q+Y+P G + TG+ +L S++ L L
Sbjct: 48 NIKDFGAKENGQYDCTQAINSAI---EACHAQGGGQVYIPDGTYFTGAIHLLSNVNLHLS 104
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG- 160
A++ S +P+H+ + + + G+E+ G Y LI + ++ +TG GT+ G G
Sbjct: 105 DNAIVSFSTDPTHY--LPEVFTRWEGLEMMG--YSPLIYAFEQENIAITG-KGTLQGNGD 159
Query: 161 -SVWWDWFSSQSLN-----------------------------------------YSRPH 178
WW W Y RP
Sbjct: 160 NQTWWPWKGPHKEGHWDLIKDSQGKVLHQREARDQLMVDAEAGVPVSERIYSTGAYLRPP 219
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
++ +N+++ +T N+P + ++PV C +V + ++ + P + G P+S D+V
Sbjct: 220 FIQPYKCKNILIQGVTIKNSPFWLMNPVLCKSVTVDKVNFSS--HGPNSDGCDPESCDHV 277
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
I++C+ G D I++KSG + G G P+ ++ I ++ G V GSE+SGG++
Sbjct: 278 HIKNCVFDTGDDCIAIKSGRNADGRRVGVPSQNIVIENCHMKEGHG-GVVIGSEISGGVN 336
Query: 299 NVQVEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVA-----FGACGNCG 350
NV V+ + DS + I +T RGG I I I + ++ + A + G+ G
Sbjct: 337 NVFVQNCTM-DSPHLERAIRIKTNSVRGGLIEHIRIRNVDVGTVKNAVVINFYYEEGDAG 395
Query: 351 SHPDDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSN 399
FD P + I +++ N+ + A G + AP +I N
Sbjct: 396 Q-----FD----PTVRDIQIENLHCKNVLSKAFYLNGFERAPINDIHFKN 436
>gi|265752310|ref|ZP_06088103.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263237102|gb|EEZ22572.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 1095
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 166/367 (45%), Gaps = 42/367 (11%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I E+G G+G + T Q I A GG + +P+G++L+G+ + L +E
Sbjct: 709 NIKEYGVKGNGYS-ETATLQRII---NEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIE 764
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
K A ++ + +P+ + V+ P+ GIE +R++ + D V G IDG+G
Sbjct: 765 KNAKLISTVDPNEFPVI---PTRFEGIE---KRWRCAFLNFDHSDGVKVYGEGVIDGKGV 818
Query: 162 VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
+W N RP LV F +S L +N ++ +H +Y + I I + A
Sbjct: 819 ---EWKKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 875
Query: 222 PESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQS 281
P + GI DSS+++ I I D IS+KSG DE G GRP+ ++ I
Sbjct: 876 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 935
Query: 282 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG--IEFRTTKGRGGYIRQIVISD------ 333
G VA GSE+SG I NV + L D+ N + F++ RGG + I D
Sbjct: 936 GHG-GVAMGSEISGDIRNVTIRSC-LMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGA 993
Query: 334 AELYNINVAFGACGNCGSHPDDDFDPDALPA------IDQITFKDIIGTNITIAGNFTGI 387
+++IN+ + P LPA + I FK+I G + AG G
Sbjct: 994 RSIFDINMEWRMV------------PPLLPAHYPLTCLRNIHFKNINGEAQS-AGTMYGF 1040
Query: 388 QEAPFAN 394
+E PF N
Sbjct: 1041 KETPFGN 1047
>gi|430837659|ref|ZP_19455621.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430840340|ref|ZP_19458267.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430859280|ref|ZP_19476893.1| glycosyl hydrolase [Enterococcus faecium E1552]
gi|430487173|gb|ELA63943.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430489826|gb|ELA66401.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430544024|gb|ELA84074.1| glycosyl hydrolase [Enterococcus faecium E1552]
Length = 436
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 149/305 (48%), Gaps = 31/305 (10%)
Query: 61 QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDV 117
Q+ L+ D+G + +++P G +L G+ L L E+GAV+ G + +
Sbjct: 20 QDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPE 79
Query: 118 VDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD--W--------- 166
+D + G+E+ + +++N +D+++ G G IDGQG WW+ W
Sbjct: 80 IDTRVA---GVEM--KWPAAILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTR 133
Query: 167 --FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISV 218
+ + L + RP +E+VVV +L F + +N+ Y ++V ++ + +
Sbjct: 134 AEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVII 193
Query: 219 HAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVL 278
+ P T GI D S NV + +C +A G D I++KSG D G R ++ + + R
Sbjct: 194 R-NNDGPSTDGIDIDYSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK 252
Query: 279 LQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYN 338
++S G V GSE+S G+S+V + I + S GI +++K RGG I I + + + +
Sbjct: 253 IRSGYG--VTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMID 310
Query: 339 INVAF 343
+ F
Sbjct: 311 VQFPF 315
>gi|255034418|ref|YP_003085039.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254947174|gb|ACT91874.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 528
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 174/390 (44%), Gaps = 41/390 (10%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
++ IT+ GA + T A Q+AI + K G + VP+G W TG +L S++ L
Sbjct: 71 TIRITDKGA--RAGAMATKAIQSAI---DEVSKKKGGTVIVPAGTWRTGRISLKSNVNLH 125
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDN---GTI 156
+ +GA + S P D + + + G+EL +LI ++ VTG G
Sbjct: 126 ISEGAELRFS--PEIEDYLPAVFTRNEGVEL--MSLGALIYANGQENIAVTGKGKLVGPP 181
Query: 157 DG------------QGSVWWDWFSSQSLNYSR-------PHLVEFISSENVVVSNLTFLN 197
DG + V D S+ + + P + I+ + V + +T N
Sbjct: 182 DGPVRQRYMNVNVIEKVVPADKPVSERVYEGKDGGFIFPPMFISPINCKKVYIEGITLHN 241
Query: 198 APAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSG 257
P +N+ PVYC NV I+ I+V + P GI +SS NV IE C ++ G D ++K+G
Sbjct: 242 TPFWNVVPVYCDNVIIRGITVQS-VGIPRGDGIDIESSRNVLIEYCTLSSGDDCFTIKAG 300
Query: 258 WDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFR 317
E GI +PT +V IR L + G + GSE +G I NV V D+ G+ F+
Sbjct: 301 RGEDGIRVNKPTENVVIRHCLAREGHG-GITCGSETAGMIRNVYVRDCVFDDTDTGLRFK 359
Query: 318 TTKGRGGYIRQIVISDAE--LYNINVAFGACGNCG--SHPDDDFDP----DALPAIDQIT 369
T + R G IV + L V F G+ D P D PA IT
Sbjct: 360 TRRSRAGGGENIVYENIRMNLRGDAVKFDMLGSRQYVGELADRLPPRPVNDLTPAYRNIT 419
Query: 370 FKDIIGTNITIAGNFTGIQEAPFANICLSN 399
++I+ + TGI E+P AN+ + N
Sbjct: 420 ARNIVVDKARTFIDITGIPESPAANLLIEN 449
>gi|430854301|ref|ZP_19472017.1| glycosyl hydrolase [Enterococcus faecium E1258]
gi|430539030|gb|ELA79293.1| glycosyl hydrolase [Enterococcus faecium E1258]
Length = 436
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 149/305 (48%), Gaps = 31/305 (10%)
Query: 61 QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDV 117
Q+ L+ D+G + +++P G +L G+ L L E+GAV+ G + +
Sbjct: 20 QDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPE 79
Query: 118 VDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD--W--------- 166
+D + G+E+ + +++N +D+++ G IDGQG WW+ W
Sbjct: 80 IDTRVA---GVEM--KWPAAILNVLSAKDILIEGKR-IIDGQGDHWWELYWGKDQKSGTR 133
Query: 167 --FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISV 218
+ + L + RP +E+VVV +L F + +N+ Y ++V ++ + +
Sbjct: 134 AEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVII 193
Query: 219 HAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVL 278
+ P T GI DSS NV + +C +A G D I++KSG D G R ++ + + R
Sbjct: 194 -CNNDGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK 252
Query: 279 LQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYN 338
++ SG V GSE+S G+S+V + I + S GI +++K RGG I I + + + +
Sbjct: 253 IR--SGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMID 310
Query: 339 INVAF 343
+ F
Sbjct: 311 VQFPF 315
>gi|425057510|ref|ZP_18460923.1| polygalacturonase [Enterococcus faecium 504]
gi|403040305|gb|EJY51392.1| polygalacturonase [Enterococcus faecium 504]
Length = 436
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 153/317 (48%), Gaps = 37/317 (11%)
Query: 55 LNTLAF------QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
+N L F Q+ L+ D+G + +++P G +L G+ L L E+GAV
Sbjct: 8 INALNFKTNDTQQDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAV 67
Query: 106 ILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD 165
+ G + + +D + G+E+ + +++N +D+++ G G IDGQG WW+
Sbjct: 68 LKGRTDIEAFPEIDTRVA---GVEM--KWPAAILNVLSAKDILIEG-KGIIDGQGDHWWE 121
Query: 166 --W-----------FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
W + + L + RP +E+VVV +L F + +N+
Sbjct: 122 LYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQIT 181
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y ++V ++ + + + P T GI DSS NV + +C +A G D I++KSG D G
Sbjct: 182 YSNDVLVEKVIIR-NNDGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVN 240
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
R ++ + + R ++ SG V GSE+S G+S+V + I + S GI +++K RG I
Sbjct: 241 RKSSRIEVARCKIR--SGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGEVI 298
Query: 327 RQIVISDAELYNINVAF 343
I + + + ++ F
Sbjct: 299 ENIRVENLNMIDVQFPF 315
>gi|255523559|ref|ZP_05390527.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296186479|ref|ZP_06854882.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
gi|255512816|gb|EET89088.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296048926|gb|EFG88357.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
Length = 532
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 183/414 (44%), Gaps = 43/414 (10%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+IT++GA T NT AF+ AI GG ++ VP+G WLTG L S++ L+L+
Sbjct: 65 NITDYGAESGSITKNTDAFKKAITECNKV---GGGRVVVPAGTWLTGPIELKSNVNLYLD 121
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GA+++ S NP + D S YK+LI+G L ++ +TGD G ++G G+
Sbjct: 122 SGALVIFSSNPEDYKKTDEKNS-------SSNSYKNLISGSNLSNIAITGD-GVLNGNGA 173
Query: 162 VW------------WD----------------WFSSQSLNYSRPHLVEFISSENVVVSNL 193
W W W + Q +N RP+L+ + ++V++
Sbjct: 174 FWRPVKKEKVTDSIWKSFVSAGGVLDSAGTTVWPNKQVVNVKRPNLLNLSNCKSVLLDGP 233
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+F N+P +NI N+ ++N + + T GI + NV I + + G D I
Sbjct: 234 SFENSPQFNIDINSSENLIVRNTKIFNEYWAQNTDGIDISACKNVLIYNDTVNTGDDGIC 293
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG 313
+KSG +V I ++ + G V GS GG+ N+ V + + +G
Sbjct: 294 MKSGSSSKSNNDEPTLENVVIENCIVNHAHGGFVV-GSNTDGGMKNIYVHNCNYIGTDSG 352
Query: 314 IEFRTTKGRGGYIRQIVISDAELYNI-NVAFGACGNCGSHPDDDFDPDALPAIDQITFKD 372
+ F++ G GG + I I + NI N A N + ++ + +P I +
Sbjct: 353 LRFKSDIGNGGKVEDIYIDGINMKNIVNDAIVFDTNYEAKNTNN-TSNKVPNFQNIHISN 411
Query: 373 IIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFP 426
+ A N G+ P N+ L NI++ G +++ SN++ + + P
Sbjct: 412 VFCDGAQEAANIKGLDAVPVKNLDLKNITIKSTNG-FSAENTSNVNLDNVKITP 464
>gi|293370067|ref|ZP_06616633.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634859|gb|EFF53382.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 461
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 150/322 (46%), Gaps = 41/322 (12%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT+FGAV G+ NT A +AI ++ GG ++ VP+G WLTG + S++ L+LE+
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAI---EACNQSGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
AV+ + NPS D LP+ E L Y L+ + +V +TG GT+ +
Sbjct: 112 NAVLNFTDNPS-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 165
Query: 162 VWWDWFSS-----QSL----------------------NYSRPHLVEFISSENVVVSNLT 194
W WF ++L N+ RPHL+ F +NV++
Sbjct: 166 TWKVWFKRPQSHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFK 225
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
+P + IH C ++N+ V A + GI + S N +EDC G DA+ +
Sbjct: 226 ICESPFWTIHLYMCDGGLVRNLDVKAHGHN--NDGIDFEMSRNFLVEDCSFDQGDDAVVI 283
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
K+G ++ P ++ IR + + + GSE+SGGI N+ + +S+ +
Sbjct: 284 KAGRNQDAWRLNTPCENIVIRNCQILKGH-TLLGIGSEISGGIRNIYMHDCTAPNSVMRL 342
Query: 315 EF-RTTKGRGGYIRQIVISDAE 335
F +T RGG+I + + + +
Sbjct: 343 FFVKTNHRRGGFIENVYMKNVK 364
>gi|325300073|ref|YP_004259990.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319626|gb|ADY37517.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 458
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 173/392 (44%), Gaps = 45/392 (11%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT++GA K NT A AI ++ GG ++ VP+G+W TG +L S++ L+LE+
Sbjct: 52 ITKYGASHADKKKNTRALAKAI---EACNRAGGGRVVVPAGEWFTGPVHLKSNVNLYLEE 108
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GAV+ S +P+ D LP+ E L Y L+ + +V +TG G +
Sbjct: 109 GAVLRFSDDPA-----DYLPAVMTSWEGLECYNYSPLVYAFECENVAITG-KGVLAPDMD 162
Query: 162 VWWDWFS---------------------------SQSLNYSRPHLVEFISSENVVVSNLT 194
W WF ++ N+ RPHL+ F ++V++
Sbjct: 163 TWKIWFKRPQAHLHALAQLYSMASTDVPVELRQMARGENHLRPHLIHFNRCKHVLLDGFK 222
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
+P + IH C++ ++N+ V A + GI + S N +E C G DA+ +
Sbjct: 223 IRQSPFWTIHLYMCNSGVVRNLDVQAHGHN--NDGIDFEMSRNFLVEHCTFDQGDDAVVI 280
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
KSG ++ P ++ +R ++ + GSEMSGG+ N+ + + +S+ +
Sbjct: 281 KSGRNQDAWRLNTPCENIVVRHCAIRKGH-VLLGIGSEMSGGVRNIYMHDCTVPESVQRL 339
Query: 315 EF-RTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP---DALPAIDQITF 370
F +T RGG+I I + + E ++ AF + + D P L I I
Sbjct: 340 FFLKTNHRRGGFIENIYLENIEAGDMLRAFEIDTDV-LYQWKDLVPTYERKLTRIKGIYM 398
Query: 371 KDIIGTNITIAGNFTGIQEAPFANICLSNISL 402
K++ + G +E P ++ + N+ +
Sbjct: 399 KNVHCKSADAIYELKGEKEEPIRDVFIENVKV 430
>gi|299141314|ref|ZP_07034451.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
gi|298577274|gb|EFI49143.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
Length = 858
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 168/395 (42%), Gaps = 75/395 (18%)
Query: 30 DQPTLDPRPHSVSITEFGAVGDGKTL-NTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTG 88
+QP + R +V IT+FGA N A AI YL A GG ++ V +GKW TG
Sbjct: 37 EQPKIVKR--TVVITKFGAKTTASAAQNQQAIHRAIAYL---AKLGGGKVVVLAGKWQTG 91
Query: 89 SFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVV 148
+ LTS + L + K A++ + S + +V + G+ Y I Y DVV
Sbjct: 92 ALRLTSGIELVVSKDALLQFVFDRSLYPLV---KTSWEGMMCWN--YSPCIYSYGADDVV 146
Query: 149 VTGDNGTIDGQGS--VWWDWFSSQSLNYS------------------------------- 175
V+G+ GTIDG GS WW Q Y
Sbjct: 147 VSGE-GTIDGGGSNETWWPMCGKQVFGYVKGVTKEAQVSGSRRRLQQFAEDDVPWDERRF 205
Query: 176 ------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVG 229
RP L+ F+ V VS +T L++P + IHP+ C NV + + + E P G
Sbjct: 206 GLGQGLRPQLINFVKGNRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDG 263
Query: 230 IVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAF 289
P++ +NV I++ G D I++KSG + G + +P+ ++ IR +++ G +
Sbjct: 264 CDPEACENVLIQNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNCVMEDGHG-GIVI 322
Query: 290 GSEMSGGISNVQVEKI-----HLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFG 344
GSE+SGG NV E HL L +T RGG I I + V G
Sbjct: 323 GSEISGGCKNVYAEDCTMDSPHLDRVL---RIKTNNCRGGRIENINMR-------RVKVG 372
Query: 345 ACGNCGSHPDDDFDPDA------LPAIDQITFKDI 373
C + D++P+ P + + +D+
Sbjct: 373 QCKEAVVKINLDYEPEEPCYRGFEPEVRDVNIEDV 407
>gi|410636673|ref|ZP_11347265.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
gi|410143760|dbj|GAC14470.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
Length = 476
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 178/408 (43%), Gaps = 70/408 (17%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
SI +FGA + +++A + AI A GG + VP+G++ TG +L S++ L +
Sbjct: 63 SIKDFGAKPGKQNDSSMAIRAAI---ADVASAGGGTVLVPAGEFYTGPVHLESNINLHIA 119
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
+GAV+ P + + + G EL G LI + +V VTG G ++G GS
Sbjct: 120 QGAVLHFYPEPERYKPY--VFTRWEGTELMG--LSPLIYAFEKTNVAVTG-KGILEGGGS 174
Query: 162 --VWWDW------------------FSSQSL-----------------NYSRPHLVEFIS 184
WW W F+ L NY RP ++ I
Sbjct: 175 HTHWWPWKGKWKEAEWGDHPVENQKFTRDPLREMAENEVPVAQRVFDDNYLRPPFIQPIR 234
Query: 185 SENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCI 244
+NV++ +T N+P + ++PV C NV +Q I H P + G P++ +V I++CI
Sbjct: 235 CKNVLIEGVTIKNSPFWLVNPVLCENVTVQGI--HCESYGPNSDGCDPEACKDVLIQNCI 292
Query: 245 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 304
G D I++KSG + G G + ++ I +++ G V GSE+SGG+ N+ V+
Sbjct: 293 FDTGDDCIAIKSGRNADGRRVGVASENILIENCQMKAGHG-GVVIGSEISGGVRNLYVDN 351
Query: 305 IHLY--DSLNGIEFRTTKGRGGYIRQI--------VISDAELYNINVAFGACGNCGSHPD 354
+ D GI +T RGG+++ + + DA + N G G
Sbjct: 352 CEMSSPDLDRGIRIKTNSIRGGHLKNLNYRNINIGQVKDAIVINFYYEEGDVGKF----- 406
Query: 355 DDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 402
P ++ I +++ + T A + G P + L N++
Sbjct: 407 -------TPVLEDIRIENLWVEHATRAFSLRGYPHTPITGVTLKNLTF 447
>gi|293571115|ref|ZP_06682155.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430842918|ref|ZP_19460825.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|431064175|ref|ZP_19493522.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|431130293|ref|ZP_19498935.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|431739352|ref|ZP_19528287.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|431742389|ref|ZP_19531282.1| glycosyl hydrolase [Enterococcus faecium E2039]
gi|291608845|gb|EFF38127.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430492629|gb|ELA68993.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|430566194|gb|ELB05313.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|430568816|gb|ELB07846.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|430596080|gb|ELB33937.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|430600147|gb|ELB37805.1| glycosyl hydrolase [Enterococcus faecium E2039]
Length = 443
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 157/325 (48%), Gaps = 38/325 (11%)
Query: 48 AVGDGKT-LNTLAF------QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLT 97
++ D K +N L F Q+ L+ ++G + +++P G +L G+ L
Sbjct: 7 SIADKKEFINALDFKTNDIQQDDTVMLQKAINQGAKEHLPVFIPKGIYLVGALFLKDKSH 66
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
L E+GAV+ G + +D + GIE+ + +++N +D+++ G G ID
Sbjct: 67 LIFEEGAVLKGKTEIEAFPEIDTRVA---GIEM--KWPAAILNVLSAKDILIEG-KGIID 120
Query: 158 GQGSVWWD--W-----------FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNA 198
GQG WW+ W + + L + RP +E+VV+ +L F +
Sbjct: 121 GQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKS 180
Query: 199 PAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGW 258
+N+ Y ++V ++ + + + P T GI DSS +V I +C +A G D I++KSG
Sbjct: 181 GFWNLQITYSNDVLVEKVIIRHN-DGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGR 239
Query: 259 DEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRT 318
D G R ++ + I R ++ SG V GSE+S GIS+V + I + S GI ++
Sbjct: 240 DGNGARVNRKSSRIEIARCNIR--SGYGVTIGSEVSAGISDVYIHDIDFFQSDCGIRMKS 297
Query: 319 TKGRGGYIRQIVISDAELYNINVAF 343
++ RGG I I + + + ++ F
Sbjct: 298 SRERGGVIENIRVENLNMMDVQFPF 322
>gi|299148459|ref|ZP_07041521.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298513220|gb|EFI37107.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 461
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 150/322 (46%), Gaps = 41/322 (12%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT+FGAV G+ NT A +AI ++ GG ++ VP+G WLTG + S++ L+LE+
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAI---EACNQSGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
AV+ + NPS D LP+ E L Y L+ + +V +TG GT+ +
Sbjct: 112 NAVLNFTDNPS-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 165
Query: 162 VWWDWFSS-----QSL----------------------NYSRPHLVEFISSENVVVSNLT 194
W WF ++L N+ RPHL+ F +NV++
Sbjct: 166 TWKVWFKRPQSHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFK 225
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
+P + IH C ++N+ V A + GI + S N +EDC G DA+ +
Sbjct: 226 IRESPFWTIHLYMCDGGLVRNLDVKAHGHN--NDGIDFEMSRNFLVEDCSFDQGDDAVVI 283
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
K+G ++ P ++ IR + + + GSE+SGGI N+ + +S+ +
Sbjct: 284 KAGRNQDAWRLNTPCENIVIRNCQILKGH-TLLGIGSEISGGIRNIYMHDCTAPNSVMRL 342
Query: 315 EF-RTTKGRGGYIRQIVISDAE 335
F +T RGG+I + + + +
Sbjct: 343 FFVKTNHRRGGFIENVYMKNVK 364
>gi|160886940|ref|ZP_02067943.1| hypothetical protein BACOVA_04954 [Bacteroides ovatus ATCC 8483]
gi|237721224|ref|ZP_04551705.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|423288954|ref|ZP_17267805.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|423294898|ref|ZP_17273025.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
gi|156107351|gb|EDO09096.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|229449020|gb|EEO54811.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|392668718|gb|EIY62212.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|392676089|gb|EIY69530.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
Length = 461
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 150/322 (46%), Gaps = 41/322 (12%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT+FGAV G+ NT A +AI ++ GG ++ VP+G WLTG + S++ L+LE+
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAI---EACNQSGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
AV+ + NPS D LP+ E L Y L+ + +V +TG GT+ +
Sbjct: 112 NAVLNFTDNPS-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 165
Query: 162 VWWDWFSS-----QSL----------------------NYSRPHLVEFISSENVVVSNLT 194
W WF ++L N+ RPHL+ F +NV++
Sbjct: 166 TWKVWFKRPQPHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFK 225
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
+P + IH C ++N+ V A + GI + S N +EDC G DA+ +
Sbjct: 226 IRESPFWTIHLYMCDGGLVRNLDVKAHGHN--NDGIDFEMSRNFLVEDCSFDQGDDAVVI 283
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
K+G ++ P ++ IR + + + GSE+SGGI N+ + +S+ +
Sbjct: 284 KAGRNQDAWRLNTPCENIVIRNCQILKGH-TLLGIGSEISGGIRNIYMHDCTAPNSVMRL 342
Query: 315 EF-RTTKGRGGYIRQIVISDAE 335
F +T RGG+I + + + +
Sbjct: 343 FFVKTNHRRGGFIENVYMKNVK 364
>gi|390959335|ref|YP_006423092.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390414253|gb|AFL89757.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 468
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 155/316 (49%), Gaps = 29/316 (9%)
Query: 39 HSVSIT--EFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
H+ ++T FGA GDG +T A Q A L + A K P G + GS + S
Sbjct: 16 HAATLTANNFGAKGDGVADDTKAIQKA---LDAAAGKHDTVTLKP-GTYRIGSIFVKSGS 71
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
L L KG + G Q+ D +P+ GIE+ +L+N Y DV +TG+ GTI
Sbjct: 72 RLDLPKGVTLRGIQS---LDAYPLMPTRIAGIEMTWP--AALVNVYKQTDVQITGE-GTI 125
Query: 157 DGQGSVWWD--W-----FSSQSLNYS------RPHLVEFISSENVVVSNLTFLNAPAYNI 203
DG GS WW W + + L ++ RP L++ S NV + + + +
Sbjct: 126 DGDGSYWWKSYWDLRAKYEPKGLRWASDYDAKRPRLIQVFDSSNVKLDGPMLTRSGFWTV 185
Query: 204 HPVYCSNVHIQNISVHAPP--ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEY 261
H Y +V I ++++ + P T GI DSS +V ++ I + DA+ LK+G D
Sbjct: 186 HICYSHDVTIDHVTIRNNEGGKGPSTDGIDIDSSHDVLVQHADIDVNDDALCLKAGRDSD 245
Query: 262 GIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKI-HLYDSLNGIEFRTTK 320
G+ RPT +V +R L+++ + ++V FGSE SGG N++ + L NG+ ++ K
Sbjct: 246 GLRVNRPTYNVVLRDSLIRTGA-AAVTFGSETSGGFRNIEAYNLTALRGVTNGVLIKSAK 304
Query: 321 GRGGYIRQIVISDAEL 336
RGG+ + + D L
Sbjct: 305 VRGGFGENLRVHDLHL 320
>gi|329962597|ref|ZP_08300545.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529628|gb|EGF56526.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 454
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 194/448 (43%), Gaps = 65/448 (14%)
Query: 2 KMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPR------PHSV-SITEFGAVGDGKT 54
K V L L SA + GQ P + P S ++T++GA D
Sbjct: 3 KRSVLGYLFLLFLSACTTTSQKESGQWAKMPEILKNIIPPTFPDSTYNVTDYGAKNDTAF 62
Query: 55 LNTLAFQNAIFYLKSFADKGGAQLYVPSGKW-LTGSFNLTSHLTLFLEKGAVILGSQNPS 113
+ A AI GG + +P+G + + G+ L S++ L + +GA + S S
Sbjct: 63 DSRPAILEAI---NKCNQNGGGTVLIPAGNYFIKGAITLKSNVNLHIVEGARLEFSTAAS 119
Query: 114 HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD-WFSSQSL 172
D + + + G E Y I Y +V +TG GT+DG G+V ++ W + Q
Sbjct: 120 --DYLPMVLTKWEGTEC--FNYTPFIYAYQCTNVALTGK-GTLDGNGAVTFNGWHAKQGP 174
Query: 173 N-----------------------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
Y RP +++F +NV+V ++ ++P + IHPV+C+
Sbjct: 175 AVDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLVEDVRIFDSPFWIIHPVFCN 234
Query: 210 NVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPT 269
NV ++NI + + + G P+S NV IE+ +G D I++KSG D+ G G+ T
Sbjct: 235 NVTVRNIYIDS--NNYNNDGCDPESCTNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQAT 292
Query: 270 TDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQI 329
+V IR + ++ GSE SGG+ NV +E + NGI F++ RGGY +
Sbjct: 293 ENVIIRNCHF---ARWAITIGSETSGGVRNVYIEDCKIDSCRNGIYFKSNLDRGGYFENL 349
Query: 330 VISDAE-------LYNINVAF-GACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNI-TI 380
+ E + N + G G G+HP I +DI + ++
Sbjct: 350 NMRRIEADVCLWGVVNFRTNYHGYRG--GNHP---------TLFRNICIEDINCNRVDSV 398
Query: 381 AGNFTGIQEAPFANICLSNISLSINPGS 408
A G+ EA NI L NI + P +
Sbjct: 399 ALMANGLPEAKLYNITLRNIKVKKAPKA 426
>gi|116619802|ref|YP_821958.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222964|gb|ABJ81673.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 174/393 (44%), Gaps = 43/393 (10%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I ++GA DG T AF+ AI K+ ++VP+GK+ TG L S+L L+ +
Sbjct: 29 NILDYGAKNDGSAPATGAFRAAIQAAKAAGG---GTVFVPAGKYTTGPIELVSNLVLYFD 85
Query: 102 KGAVI---------LGSQNPSHWDVVDPLPSYG----RGIELPGRRYKSLIN----GYML 144
GAV+ + S+ S + + P+P G + + GR N M
Sbjct: 86 AGAVVEFPAQRLPFVKSRQQS-IEALTPVPLIGGSNLENVTVAGRGVLKSNNEDWMKLMP 144
Query: 145 RDVVVTGDNGTIDGQGSVWWDWFSSQSLN-------------YSRPHLVEFISSENVVVS 191
R T D G+ +G W + + RP V + S NV++
Sbjct: 145 RQKATTADPGSANGPN--WEKLLTMLEVKTPAPEAAYLAAAPELRPSFVRTMESRNVLIE 202
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
L F+ +P + IH +Y NV ++++ + P +T GI DSS NV I +C I G D
Sbjct: 203 GLQFVGSPMWTIHLLYSDNVVVRDVIIETYP-GVHTDGIAVDSSRNVRISNCYIDTGDDG 261
Query: 252 ISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL 311
I +K+G D G+ RPT +V I + + G +V GSE SG + N+ I +
Sbjct: 262 IVIKAGKDSDGLRVNRPTENVSITNCSVHHAHG-AVTIGSETSGWVRNLVASNITCDGTQ 320
Query: 312 NGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACG---NCGSHPDDDFDP--DALPAID 366
G+ ++ +GRGG + + + + N+ A G P +D +P + P
Sbjct: 321 MGVRIKSRRGRGGGVEDVRFDNWTMENVGTAVNITNYYLMEGEKPANDPEPVSNRTPVFR 380
Query: 367 QITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
I ++ + +A + G+ E +N+ +S+
Sbjct: 381 NIAISNMTVNHARVAIDIEGLPEMNVSNLRISD 413
>gi|257900361|ref|ZP_05680014.1| glycoside hydrolase [Enterococcus faecium Com15]
gi|257838273|gb|EEV63347.1| glycoside hydrolase [Enterococcus faecium Com15]
Length = 412
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 165/351 (47%), Gaps = 40/351 (11%)
Query: 78 LYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKS 137
+++P G +L G+ L L E+GAV+ G + +D + GIE+ + +
Sbjct: 16 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDTRVA---GIEM--KWPAA 70
Query: 138 LINGYMLRDVVVTGDNGTIDGQGSVWWD--W-----------FSSQSLNY------SRPH 178
++N +D+++ G G IDGQG WW+ W + + L + RP
Sbjct: 71 ILNVLSAKDILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPR 129
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
+E+VV+ +L F + +N+ Y ++V ++ + + + P T GI DSS +V
Sbjct: 130 ACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKVIIRHN-DGPSTDGIDIDSSTDV 188
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
I +C +A G D I++KSG D G R ++ + I R ++ SG V GSE+S GIS
Sbjct: 189 RIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIR--SGYGVTIGSEVSAGIS 246
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGS--HPDDD 356
+V + I + S GI ++++ RGG I I + + + ++ F + + + +
Sbjct: 247 DVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNS 306
Query: 357 FDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPG 407
D + +P Q ++I + Q NI + N+ S++PG
Sbjct: 307 NDLERMPESWQAVAEEIPESK----------QMTKLRNIHVKNVQASLSPG 347
>gi|356494975|ref|XP_003516356.1| PREDICTED: uncharacterized protein LOC100783583 [Glycine max]
Length = 1470
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 80/115 (69%)
Query: 121 LPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLV 180
L SYGRG + P R+ SLI G L DV++TG NGTIDGQG WWD F L +RP+++
Sbjct: 1075 LYSYGRGRDAPDGRFSSLIFGTNLTDVIITGYNGTIDGQGCYWWDKFHKGELKLTRPYMI 1134
Query: 181 EFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSS 235
E + S+++ +SNLT +N+P++ +HP+Y S++ IQ +++ AP +SP T GI P S
Sbjct: 1135 EIMFSDHIQISNLTLINSPSWFVHPIYTSDIIIQGLTILAPVDSPNTDGIDPGDS 1189
>gi|298480639|ref|ZP_06998835.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298273073|gb|EFI14638.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 155/350 (44%), Gaps = 60/350 (17%)
Query: 38 PHSVSITEFGA-VGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
+ IT+FGA V D L A AI S A GG + VP G + TG L S +
Sbjct: 47 KRTYRITDFGAKVDDESNLCHEAINQAILQC-SLA--GGGTVLVPKGTFYTGPITLKSDV 103
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
LE+GAV+ S + S + + + GI+ R LI Y ++ +TG G I
Sbjct: 104 NFHLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAR--PLIYAYGESNIAITG-KGII 158
Query: 157 DGQGSV--WWDWFSSQSLNYS-----------------------------------RPHL 179
DGQGS+ WW S + RP L
Sbjct: 159 DGQGSIDAWWPMCGSAKYGWKEGMVAQRNGGRERLQMYGETSTPVYKRLMKPEDGMRPQL 218
Query: 180 VEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVC 239
+ S +++ +T LN+P + IHP++C ++ + ++V P G P+S NV
Sbjct: 219 LNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVL 276
Query: 240 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 299
IE+C G D I++KSG +E G + P+ ++ +R ++++ G V GSE+SGG N
Sbjct: 277 IENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMKNGHG-GVVIGSEISGGYRN 335
Query: 300 VQVEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC 346
+ VE + DS N I +T+ RGG I I + NV G C
Sbjct: 336 LFVEDCQM-DSPNLDRVIRIKTSTCRGGLIENIFVR-------NVTVGQC 377
>gi|293379024|ref|ZP_06625177.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|292642303|gb|EFF60460.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
Length = 436
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 177/383 (46%), Gaps = 49/383 (12%)
Query: 55 LNTLAF------QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
+N L F Q+ L+ ++G + +++P G +L G+ L L E+GAV
Sbjct: 8 INALDFKTNDIQQDDTVMLQKAINQGAKEHSPVFIPKGIYLVGALFLKDKSHLIFEEGAV 67
Query: 106 ILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD 165
+ G + +D + G+E+ + +++N +D+++ G G IDGQG WW+
Sbjct: 68 LKGKTEIEAFPEIDTRVA---GVEM--KWPAAILNVLSAKDILIEG-KGIIDGQGEHWWE 121
Query: 166 --W-----------FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
W + + L + RP +E+VV+ +L F + +N+
Sbjct: 122 LYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWNLQIT 181
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y ++V ++ I + + P T GI DSS +V I +C +A G D I++KSG D G
Sbjct: 182 YSNDVLVEKIIIRHN-DGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNGARVN 240
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
R ++ + I R ++ SG V GSE+S G+S+V + I + S GI ++++ RGG I
Sbjct: 241 RKSSRIEIARCNIR--SGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSRKRGGVI 298
Query: 327 RQIVISDAELYNINVAFGACGNCGS--HPDDDFDPDALPAIDQITFKDIIGTNITIAGNF 384
I + + + ++ F + + + + D + +P Q ++I +
Sbjct: 299 ENIRVENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPESWQAVAEEIPESK------- 351
Query: 385 TGIQEAPFANICLSNISLSINPG 407
Q NI + N+ S++PG
Sbjct: 352 ---QMTKVRNIHVKNVQASLSPG 371
>gi|425055006|ref|ZP_18458501.1| polygalacturonase [Enterococcus faecium 505]
gi|403034856|gb|EJY46278.1| polygalacturonase [Enterococcus faecium 505]
Length = 436
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 154/317 (48%), Gaps = 37/317 (11%)
Query: 55 LNTLAF------QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
+N L F Q+ L+ ++G + +++P G +L G+ L L E+GAV
Sbjct: 8 INALDFKTNDIQQDDTVMLQKAINQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAV 67
Query: 106 ILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD 165
+ G + +D + GIE+ + +++N +D+++ G G IDGQG WW+
Sbjct: 68 LKGKTEIEAFPEIDTRVA---GIEM--KWPAAVLNVLSAKDILIEG-KGIIDGQGEHWWE 121
Query: 166 --W-----------FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
W + + L + RP +E+VV+ +L F + +N+
Sbjct: 122 LYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWNLQIT 181
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y ++V ++ + + + P T GI DSS +V I +C +A G D I++KSG D G
Sbjct: 182 YSNDVLVEKVIIRHN-DGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNGARVN 240
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
R ++ + I R ++S G V GSE+S G+S+V + I+ + S GI ++++ RGG I
Sbjct: 241 RKSSRIEIARCNIRSGYG--VTIGSEVSAGVSDVYIHDINFFQSDCGIRMKSSRERGGVI 298
Query: 327 RQIVISDAELYNINVAF 343
I + + + ++ F
Sbjct: 299 ENIRVENLNMMDVQFPF 315
>gi|375100882|ref|ZP_09747145.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661614|gb|EHR61492.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 485
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 169/369 (45%), Gaps = 52/369 (14%)
Query: 73 KGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPG 132
KGG ++ VP G++ TG+ +L S++ L + +GA + SQ+P+ D + + + GIEL
Sbjct: 93 KGGGKVVVPPGEYHTGAIHLRSNIELHISRGATLRFSQDPA--DYLPMVHTRWEGIEL-- 148
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WWDW------------------------ 166
Y + + + DV +TG G +DGQ + WW W
Sbjct: 149 YNYSPFVYAHGVHDVAITG-GGVLDGQANPQHWWPWKTEPDGRGGVIETEHRDALHAMAE 207
Query: 167 ---------FSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNIS 217
F+ L RP+ V+F S +++VS +T N+P + IHPV NV + ++
Sbjct: 208 RGVPVEQRRFTDSKL---RPNFVQFYRSSDILVSGVTLTNSPMWMIHPVLSENVIVDGVT 264
Query: 218 VHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRV 277
+ + P+ P + G+ P+SS NV I + G D I++KSG + G G P+ ++ I
Sbjct: 265 LDS-PDGPNSDGVNPESSRNVVIRNSSFDNGDDCIAIKSGRNADGRRIGVPSENIVIHDN 323
Query: 278 LLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL---NGIEFRTTKGRGGYIRQIVISDA 334
+ G V GSEMSG + NV E+ ++ DS + +T RGG + + D
Sbjct: 324 RMFDGHG-GVVIGSEMSGDVRNVFAER-NVMDSPRLDRALRIKTNSVRGGTVEGVYFRDN 381
Query: 335 ELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFAN 394
++ + A H ++ D P + + +++ A G + +P +
Sbjct: 382 DIPEV---ADAVIRVNFHYEEGDTGDFTPTVRGLHIENVHSVGGEFALYLRGYERSPVTD 438
Query: 395 ICLSNISLS 403
+ + + + S
Sbjct: 439 VTIRDSTFS 447
>gi|424764550|ref|ZP_18191970.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431050708|ref|ZP_19493377.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|431764023|ref|ZP_19552569.1| glycosyl hydrolase [Enterococcus faecium E3548]
gi|402419033|gb|EJV51317.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430560246|gb|ELA99550.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|430621327|gb|ELB58094.1| glycosyl hydrolase [Enterococcus faecium E3548]
Length = 436
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 177/383 (46%), Gaps = 49/383 (12%)
Query: 55 LNTLAF------QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
+N L F Q+ L+ ++G + +++P G +L G+ L L E+GAV
Sbjct: 8 INALDFKTNDIQQDDTVMLQKAINQGAKEHSPVFIPKGIYLVGALFLKDKSHLIFEEGAV 67
Query: 106 ILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD 165
+ G + +D + G+E+ + +++N +D+++ G G IDGQG WW+
Sbjct: 68 LKGKTEIEAFPEIDTRVA---GVEM--KWPAAILNVLSAKDILIEG-KGIIDGQGEHWWE 121
Query: 166 --W-----------FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
W + + L + RP +E+VV+ +L F + +N+
Sbjct: 122 LYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWNLQIT 181
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y ++V ++ I + + P T GI DSS +V I +C +A G D I++KSG D G
Sbjct: 182 YSNDVLVEKIIIRHN-DGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNGARVN 240
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
R ++ + I R ++ SG V GSE+S G+S+V + I + S GI ++++ RGG I
Sbjct: 241 RKSSRIEIARCNIR--SGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVI 298
Query: 327 RQIVISDAELYNINVAFGACGNCGS--HPDDDFDPDALPAIDQITFKDIIGTNITIAGNF 384
I + + + ++ F + + + + D + +P Q ++I +
Sbjct: 299 ENIRVENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPESWQAVAEEIPESK------- 351
Query: 385 TGIQEAPFANICLSNISLSINPG 407
Q NI + N+ S++PG
Sbjct: 352 ---QMTKVRNIHVKNVQASLSPG 371
>gi|227550317|ref|ZP_03980366.1| pectin lyase [Enterococcus faecium TX1330]
gi|227180577|gb|EEI61549.1| pectin lyase [Enterococcus faecium TX1330]
Length = 436
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 177/383 (46%), Gaps = 49/383 (12%)
Query: 55 LNTLAF------QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
+N L F Q+ L+ ++G + +++P G +L G+ L L E+GAV
Sbjct: 8 INALDFKTNDIQQDDTVMLQKAINQGAKEHSPVFIPKGIYLVGALFLKDKSHLIFEEGAV 67
Query: 106 ILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD 165
+ G + +D + G+E+ + +++N +D+++ G G IDGQG WW+
Sbjct: 68 LKGKTEIEAFPEIDTRVA---GVEM--KWPAAILNVLSAKDILIEG-KGIIDGQGEHWWE 121
Query: 166 --W-----------FSSQSLNY------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
W + + L + RP +E+VV+ +L F + +N+
Sbjct: 122 LYWGEDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWNLQIT 181
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y ++V ++ I + + P T GI DSS +V I +C +A G D I++KSG D G
Sbjct: 182 YSNDVLVEKIIIRHN-DGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNGARVN 240
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
R ++ + I R ++ SG V GSE+S G+S+V + I + S GI ++++ RGG I
Sbjct: 241 RKSSRIEIARCNIR--SGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVI 298
Query: 327 RQIVISDAELYNINVAFGACGNCGS--HPDDDFDPDALPAIDQITFKDIIGTNITIAGNF 384
I + + + ++ F + + + + D + +P Q ++I +
Sbjct: 299 ENIRVENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPESWQAVAEEIPESK------- 351
Query: 385 TGIQEAPFANICLSNISLSINPG 407
Q NI + N+ S++PG
Sbjct: 352 ---QMTKVRNIHVKNVQASLSPG 371
>gi|300715765|ref|YP_003740568.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
gi|299061601|emb|CAX58716.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
Length = 791
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 177/408 (43%), Gaps = 51/408 (12%)
Query: 45 EFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGA 104
+FG DGKTLNT A Q AI + +GG + + G+WL+G L S++TL +++GA
Sbjct: 379 DFGGKADGKTLNTTAIQQAI---DQCSQRGGGTVQLSPGRWLSGPLQLQSNITLQIDQGA 435
Query: 105 VILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW 164
+ S + V+ I P R ++ I + +V +TG WW
Sbjct: 436 TLQASNQEGKF--VNAF------IGHPARVNEAFIYASNVNNVAITGGGTLDGDGEKSWW 487
Query: 165 -------------------DWFSSQSL--NYSRPHLVEFISSENVVVSNLTFLNAPAYNI 203
D F L RP +EF + + + L N+P +NI
Sbjct: 488 PQALKIRAEVRGGNPKAFTDRFPGIPLANGAPRPWFIEFNNVSHSKIEQLHLTNSPMWNI 547
Query: 204 HPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGI 263
+++ +QN+ + P SP T G+ SS N+ + + I G D I++KSG
Sbjct: 548 VIRNSADITVQNVRITNPVSSPNTDGMDIVSSRNITVSNMDIHTGDDNIAIKSGLVNGTA 607
Query: 264 AYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG 323
A + D+ I +++ G SV GSE + GI V + + ++ NG+ ++ + RG
Sbjct: 608 AASK---DITIEDSVMRDGHGISV--GSETANGIGKVTINHVTFLNTENGVRIKSARDRG 662
Query: 324 GYIRQIVISDAELYNINVAF----------GACGNCGSHPDDDFDPDA-LPAIDQITFKD 372
I ++ S + N+ GA G+ + P + A P + I D
Sbjct: 663 ENIGPLIASHLTMTNVVTPVLVTNSYSGQAGAQGHTLTQPIETAAVTASTPKMKGIHISD 722
Query: 373 IIGTNITIAGNFTGIQEAPFANICLSNISLSINPG---SYNSWECSNI 417
++ T + A F+G+ E+P ++ L+NI + G Y S E NI
Sbjct: 723 LMATKASYAMIFSGLPESPVEDVTLNNIRIDAQYGVQARYVSGEGKNI 770
>gi|427384664|ref|ZP_18881169.1| hypothetical protein HMPREF9447_02202 [Bacteroides oleiciplenus YIT
12058]
gi|425727925|gb|EKU90784.1| hypothetical protein HMPREF9447_02202 [Bacteroides oleiciplenus YIT
12058]
Length = 545
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 153/331 (46%), Gaps = 42/331 (12%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+VSITE GA D T T N I + + KGG + +P+GKW G L S++ L
Sbjct: 71 TVSITERGAKKD--TFITDVINNLIDEVNA---KGGGTVLIPAGKWFAGRITLKSNVNLH 125
Query: 100 LEKGAVILGSQNPSHWDVVDPLPS-YGR--GIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
+ +GAVI S V D LP+ + R GIE+ NG ++ VTG GTI
Sbjct: 126 IAEGAVIEFSGR-----VEDYLPAVFTRHEGIEMLASGAFIYANGQ--HNIAVTG-KGTI 177
Query: 157 DG-------------QGSVWWDWFSSQSL-----------NYSRPHLVEFISSENVVVSN 192
G +V D S L ++ P + I+ NV +
Sbjct: 178 LGPELDSEVRTRLNTAANVDIDVPPSMPLAKRVFDGMEGRDFQPPRTIAPINCTNVFIEG 237
Query: 193 LTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAI 252
+T + +N+ P YC NV I+ I+V++ P GI +SS NV IE C + G D
Sbjct: 238 ITMNRSAIWNVVPTYCENVIIRGITVNSL-GIPRGDGIDVESSKNVLIEYCTLNCGDDCF 296
Query: 253 SLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN 312
+LKSG E G+ GRPT +V IR L Q G + GSE +G I N+ + +
Sbjct: 297 TLKSGRGEEGVRIGRPTENVVIRYSLAQQGHG-GITCGSETAGNIKNIYAHDCVFNGTWS 355
Query: 313 GIEFRTTKGRGGYIRQIVISDAELYNINVAF 343
GI F+ + RGG ++ + ++NVAF
Sbjct: 356 GIRFKAFRPRGGGTENVLYKRIRMIDVNVAF 386
>gi|431758794|ref|ZP_19547417.1| glycosyl hydrolase [Enterococcus faecium E3083]
gi|430616609|gb|ELB53505.1| glycosyl hydrolase [Enterococcus faecium E3083]
Length = 436
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 177/383 (46%), Gaps = 49/383 (12%)
Query: 55 LNTLAF------QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
+N L F Q+ L+ ++G + +++P G +L G+ L L E+GAV
Sbjct: 8 INALDFKTNDIQQDDTVMLQKAINQGAKEHSPVFIPKGIYLVGALFLKDKSHLIFEEGAV 67
Query: 106 ILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD 165
+ G + +D + G+E+ + +++N +D+++ G G IDGQG WW+
Sbjct: 68 LKGKTEIEAFPEIDTRVA---GVEM--KWPAAILNVLSAKDILIEG-KGIIDGQGEHWWE 121
Query: 166 --WFSSQS---------------LNYS--RPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
W Q +Y+ RP +E+VV+ +L F + +N+
Sbjct: 122 LYWGKDQKSGTRAEYDRKVLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWNLQIT 181
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y ++V ++ I + + P T GI DSS +V I +C +A G D I++KSG D G
Sbjct: 182 YSNDVLVEKIIIRHN-DGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNGARVN 240
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
R ++ + I R ++ SG V GSE+S G+S+V + I + S GI ++++ RGG I
Sbjct: 241 RKSSRIEIARCNIR--SGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVI 298
Query: 327 RQIVISDAELYNINVAFGACGNCGS--HPDDDFDPDALPAIDQITFKDIIGTNITIAGNF 384
I + + + ++ F + + + + D + +P Q ++I +
Sbjct: 299 ENIRVENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPESWQAVAEEIPESK------- 351
Query: 385 TGIQEAPFANICLSNISLSINPG 407
Q NI + N+ S++PG
Sbjct: 352 ---QMTKVRNIHVKNVQASLSPG 371
>gi|146301983|ref|YP_001196574.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156401|gb|ABQ07255.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 448
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 40/325 (12%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW-LTGSFNLTSHLT 97
+ V++ + GA GD T N F A+ K KGG + VP G + + G + S++
Sbjct: 40 YQVNVLKLGAKGDSITNNKAVFDKAMALCKK---KGGGTIIVPKGIYKINGPIHFVSNVN 96
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
L +EKGA I S NP + +V L S+ G L Y LI ++ +TG G ID
Sbjct: 97 LKIEKGAKIKFSDNPQDYPLV--LTSW-EGTML--YNYSPLIYAVDCTNIAITGV-GIID 150
Query: 158 GQGSVWWDWFS---------SQSLNYS---------------RPHLVEFISSENVVVSNL 193
G+G W F S+ +N++ RP +++F++ +N++V N+
Sbjct: 151 GEGGKIWKSFKAKEGAGKNLSREMNHNNVPVSDRKFGEGYFLRPQMIQFLNCKNILVENV 210
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
N+P + +H + N+ ++ IS + + GI P+ + +V IE+ G D ++
Sbjct: 211 RIENSPFWCLHLLKSQNITVRGISYKSLNYN--NDGIDPEYAKDVLIENVTFDNGDDNVA 268
Query: 254 LKSGWDEYGIA-YGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN 312
+K+G D G A P+ ++ IR + G V GSEMS G+ NV VE L
Sbjct: 269 IKAGRDHEGRANTASPSENIVIRNCNFKGLHG--VVIGSEMSAGVQNVFVENCKTAGYLK 326
Query: 313 -GIEFRTTKGRGGYIRQIVISDAEL 336
GI +T RGGYI+ + + + +L
Sbjct: 327 RGIYLKTNADRGGYIKNVFVQNLQL 351
>gi|145332593|ref|NP_001078162.1| polygalacturonase [Arabidopsis thaliana]
gi|332642198|gb|AEE75719.1| polygalacturonase [Arabidopsis thaliana]
Length = 452
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 191/426 (44%), Gaps = 61/426 (14%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+++ +T+FGAVGDG T ++ AF A + + G Q VP+G +T L
Sbjct: 21 NALDVTQFGAVGDGVTDDSQAFLKA--WEAVCSGTGDGQFVVPAG--------MTFMLQP 70
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYML----RDVVVTGDNG 154
+G+ P ++ L + +G +K + ++L +V+ GD G
Sbjct: 71 LKFQGSC---KSTPVFVQMLGKLVAPSKG------NWKGDKDQWILFTDIEGLVIEGD-G 120
Query: 155 TIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
I+GQGS WW+ SRP F S N+ +S LT L++P +IH C+ V I
Sbjct: 121 EINGQGSSWWE------HKGSRP---TFRSCNNLRLSGLTHLDSPMAHIHISECNYVTIS 171
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
++ ++AP SP T GI +S NV I+DCIIA G D I++ SG T+++HI
Sbjct: 172 SLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSG-----------TSNIHI 220
Query: 275 RRVLLQSSSGSSVAFGSEMSGG----ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIV 330
+ G ++ GS G + NV V+ + ++NG +T +G GY R I
Sbjct: 221 SGI--DCGPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMIT 278
Query: 331 ISDAELYNIN--VAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAG-NFTGI 387
+ L N+ + N G + + + ++ F + IGT+ + G +F
Sbjct: 279 FNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDFRCS 338
Query: 388 QEAPFANICLSNISL---SINPGSYNSWECSNIHGSSESVFPE-PCPELENSSSNSS--- 440
+ P I L ++ + S G +C N+ G+S P C EL +S+
Sbjct: 339 ERVPCTEIFLRDMKIETASSGSGQVAQGQCLNVRGASTIAVPGLECLELSTDMFSSAQLL 398
Query: 441 -STCFS 445
TC S
Sbjct: 399 EQTCMS 404
>gi|390437171|ref|ZP_10225709.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 443
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 157/347 (45%), Gaps = 33/347 (9%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+S+ +F V DG+T +T Q A + A GG +L +P+G++ +G NL S L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
E GAV++ SQ + + V + + + + L+ R++ ++G G IDG G
Sbjct: 60 EAGAVLIASQRLADYQAV-------QALSCAEKSHNVLLYALGQRNITISG-TGRIDGDG 111
Query: 161 SVWW----DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
W+ D + RP ++ F E V ++ T + AP + +H V C +VHI ++
Sbjct: 112 EAWFAAERDEQGYRLPRADRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 171
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ P T + DS + V + + ++ DAI +K+ A RP + I
Sbjct: 172 TIDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKT--THKPAALRRPARQIMITN 229
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
LL+S S + G+E + +V V ++DS GI + GG +R+++ S
Sbjct: 230 CLLRSYS-CAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSRD--GGAMRRLLFS---- 282
Query: 337 YNINVAFGACGNCGSHPDDDF-------DPDALPAI-DQITFKDIIG 375
N+ A C D DP P I +Q+ F ++ G
Sbjct: 283 -NLTFACHHAPPCHWGKADPLHISVRRRDPAITPGIVEQVQFSNVTG 328
>gi|423239876|ref|ZP_17220991.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
gi|392644865|gb|EIY38599.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
Length = 462
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 146/323 (45%), Gaps = 41/323 (12%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
SI ++GAV G+T+NT A AI GG ++ +P G+WLTG + S++ L LE
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAIVACNK---AGGGRVVIPEGEWLTGPIHFQSNVNLHLE 109
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+ A++ + NPS D LP+ E + Y L+ ++ +TG GT+
Sbjct: 110 ENAILRFTDNPS-----DYLPAVMTSWEGMECYNYSPLLYAMDCENIAITG-KGTLAPIM 163
Query: 161 SVWWDWFS---------------------------SQSLNYSRPHLVEFISSENVVVSNL 193
W WF ++ N+ RPHL+ F +NV++
Sbjct: 164 DTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEF 223
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+P + IH C ++N+ V A + GI + S N IE+C+ G DA+
Sbjct: 224 KIRQSPFWTIHLYMCDGGIVRNLDVKAHGHN--NDGIDLEMSRNFLIENCVFDQGDDAVV 281
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG 313
+K+G ++ P ++ IR + + + GSEMSGG+ NV + DS+
Sbjct: 282 IKAGRNQDAWRLNTPCENIVIRHCDILKGH-TLLGIGSEMSGGVRNVYMHNCTAPDSVFR 340
Query: 314 IEF-RTTKGRGGYIRQIVISDAE 335
+ F +T RGG+I I + + +
Sbjct: 341 LFFAKTNHRRGGFIENIWMKNVK 363
>gi|381405974|ref|ZP_09930658.1| polygalacturonase [Pantoea sp. Sc1]
gi|380739173|gb|EIC00237.1| polygalacturonase [Pantoea sp. Sc1]
Length = 443
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 144/297 (48%), Gaps = 20/297 (6%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+S+ +F DG+T +T Q A L A GG +L +P+G++ +G NL S + L L
Sbjct: 3 LSLADFHPAADGETPDTAVLQRA---LDQIAAAGGGRLTLPAGRYRSGCLNLPSDIELHL 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+ GAV++ SQ + + V + + + + L+ R++ ++G G IDG+G
Sbjct: 60 DAGAVLIASQQLADYQTV-------QALSCAEKSHNVLLYALGQRNITLSG-TGRIDGEG 111
Query: 161 SVWW----DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
W+ D + + RP L+ F E V ++ T + AP + +H V C +VHI ++
Sbjct: 112 DAWFAAERDAQGYRLPHADRPRLIVFEDCEQVTLTGFTLVQAPMWTVHLVSCRHVHIDHL 171
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ P T + DS + V + + + DAI +K+ A RP + I
Sbjct: 172 TIDNAMTMPNTDALDIDSCEAVFVSNSYFSAADDAICIKT--THKPAALRRPARQIMITN 229
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD 333
LL+S S ++ G+E + +V V ++DS GI + GG +R+++ S+
Sbjct: 230 CLLRSYS-CALKIGTETWDDVEDVTVTGCTIFDSNRGIGILSRD--GGAMRRLLFSN 283
>gi|294776431|ref|ZP_06741909.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449757|gb|EFG18279.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 424
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 147/323 (45%), Gaps = 41/323 (12%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
SI ++GAV G+T+NT A AI + GG ++ +P G+WLTG + S++ L LE
Sbjct: 15 SIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPVHFKSNVNLHLE 71
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+ A++ + NPS D LP+ E + Y L+ ++ +TG GT+
Sbjct: 72 ENAILRFTDNPS-----DYLPAVMTSWEGMECYNYSPLLYAMDCENIAITG-KGTLAPIM 125
Query: 161 SVWWDWFS---------------------------SQSLNYSRPHLVEFISSENVVVSNL 193
W WF ++ N+ RPHL+ F +NV++
Sbjct: 126 DTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEF 185
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+P + IH C ++N+ V A + GI + S N IE+C+ G DA+
Sbjct: 186 KIRQSPFWTIHLYMCDGGIVRNLDVKAHGHN--NDGIDLEMSRNFLIENCVFDQGDDAVV 243
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG 313
+K+G ++ P ++ IR + + + GSEMSGG+ NV + DS+
Sbjct: 244 IKAGRNQNAWRLNTPCENIVIRHCNILKGH-TLLGIGSEMSGGVRNVYMHNCTAPDSVFR 302
Query: 314 IEF-RTTKGRGGYIRQIVISDAE 335
+ F +T RGG+I I + + +
Sbjct: 303 LFFAKTNHRRGGFIENIWMKNVK 325
>gi|372275542|ref|ZP_09511578.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 443
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 157/347 (45%), Gaps = 33/347 (9%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+S+ +F V DG+T +T Q A + A GG +L +P+G++ +G NL S L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
E GAV++ SQ + + V + + + + L+ R++ ++G G IDG G
Sbjct: 60 EAGAVLIASQRLADYQAV-------QALSCAEKSHNVLLYALGQRNITISG-TGRIDGDG 111
Query: 161 SVWW----DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
W+ D + RP ++ F E V ++ T + AP + +H V C +VHI ++
Sbjct: 112 EAWFAAERDEQGYRLPRADRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 171
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ P T + DS + V + + ++ DAI +K+ A RP + I
Sbjct: 172 TIDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKT--THKPAALRRPARQIMITN 229
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
LL+S S + G+E + +V V ++DS GI + GG +R+++ S
Sbjct: 230 CLLRSYS-CAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSRD--GGAMRRLLFS---- 282
Query: 337 YNINVAFGACGNCGSHPDDDF-------DPDALPAI-DQITFKDIIG 375
N+ A C D DP P I +Q+ F ++ G
Sbjct: 283 -NLTFACHHAPPCHWGKADPLHISVRRRDPAITPGIVEQVQFSNVTG 328
>gi|194015552|ref|ZP_03054168.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
gi|194012956|gb|EDW22522.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
Length = 463
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 150/322 (46%), Gaps = 46/322 (14%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++ +GA G L+T A Q+AI G ++ +P G ++TG+ L SH+ L L
Sbjct: 55 NVVHYGADAKGTELSTDAIQSAIDDAHRLK---GGRVLIPEGTFVTGALELKSHVELHLH 111
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
+ A + SQN D + + + G+EL Y LI + ++ +TG GT+DG+G
Sbjct: 112 EKAYVAFSQNRK--DYLPLVLTRYEGVEL--YNYSPLIYAHHAENIAITG-AGTLDGRGD 166
Query: 162 V--WWDW-------------------FSSQSL----------NYSRPHLVEFISSENVVV 190
WW W + + + +Y R ++ + V++
Sbjct: 167 EHHWWPWKYGTNGQPSQDRDRQLLFDMAEKRIPVEERVFGEGHYLRSSFIQPYQCQQVLI 226
Query: 191 SNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHD 250
+T ++P + IHPV V ++ VH P T G+ P+S NV IEDC G D
Sbjct: 227 EGVTVKDSPMWQIHPVLSELVIVR--GVHIIGHGPNTDGVNPESCRNVLIEDCYFDNGDD 284
Query: 251 AISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS 310
I++KSG +E G G P+ ++ IRR ++ G V GSE+SGG+ + E ++ DS
Sbjct: 285 CIAIKSGRNEDGRRIGIPSENIVIRRNEMRDGHG-GVTIGSEISGGVRYIYAEN-NVMDS 342
Query: 311 LN---GIEFRTTKGRGGYIRQI 329
N + +T RGG I I
Sbjct: 343 PNLDRALRIKTNSVRGGTIEHI 364
>gi|150002759|ref|YP_001297503.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149931183|gb|ABR37881.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 462
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 147/323 (45%), Gaps = 41/323 (12%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
SI ++GAV G+T+NT A AI + GG ++ +P G+WLTG + S++ L LE
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPVHFKSNVNLHLE 109
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+ A++ + NPS D LP+ E + Y L+ ++ +TG GT+
Sbjct: 110 ENAILRFTDNPS-----DYLPAVMTSWEGMECYNYSPLLYAMDCENIAITG-KGTLAPIM 163
Query: 161 SVWWDWFS---------------------------SQSLNYSRPHLVEFISSENVVVSNL 193
W WF ++ N+ RPHL+ F +NV++
Sbjct: 164 DTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEF 223
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+P + IH C ++N+ V A + GI + S N IE+C+ G DA+
Sbjct: 224 KIRQSPFWTIHLYMCDGGIVRNLDVKAHGHN--NDGIDLEMSRNFLIENCVFDQGDDAVV 281
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG 313
+K+G ++ P ++ IR + + + GSEMSGG+ NV + DS+
Sbjct: 282 IKAGRNQDAWRLNTPCENIVIRHCNILKGH-TLLGIGSEMSGGVRNVYMHNCTAPDSVFR 340
Query: 314 IEF-RTTKGRGGYIRQIVISDAE 335
+ F +T RGG+I I + + +
Sbjct: 341 LFFAKTNHRRGGFIENIWMKNVK 363
>gi|427386645|ref|ZP_18882842.1| hypothetical protein HMPREF9447_03875 [Bacteroides oleiciplenus YIT
12058]
gi|425726135|gb|EKU89001.1| hypothetical protein HMPREF9447_03875 [Bacteroides oleiciplenus YIT
12058]
Length = 455
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 156/306 (50%), Gaps = 24/306 (7%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
+ + ++ ++GA G+GK L++ A Q AI + GG + VP+G +L+ + L ++
Sbjct: 19 QAETFNVKKYGARGNGKKLDSPAIQKAI---DACHKAGGGTVLVPAGTYLSATIVLKDNV 75
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL LEK A+ILG+ + +D +DP + G GI++ +L+ ++VV+ G+ G I
Sbjct: 76 TLHLEKDALILGTTDYKAYDNLDPF-TEGLGIDVGW----ALLVAVDAKNVVLEGE-GVI 129
Query: 157 DGQGSVWWDWFSSQSLNYS------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSN 210
DGQGS + RP L+ ++ E++ V +T A A+ H C N
Sbjct: 130 DGQGSALKERHIKIDTRPEGQRWGLRPFLLRWVRCEDIRVEGVTLKYAGAWTSHYFQCRN 189
Query: 211 VHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTT 270
V+I NI++ + + + GI D +V I +C I G DA+ K+ + G
Sbjct: 190 VNIHNITIRSFGVA-HNDGINIDGCQHVRISNCDIVSGDDALCFKTTSSKMG------CD 242
Query: 271 DVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIV 330
D+ + + L+S+ + + G+E GG N+++ H+YD+ NG + G ++R +
Sbjct: 243 DIIVTNMKLKSNQ-AGIKMGTESMGGFENIKISNCHIYDTKNG-GIKLFSVDGAHLRNVE 300
Query: 331 ISDAEL 336
ISD +
Sbjct: 301 ISDITM 306
>gi|257897638|ref|ZP_05677291.1| glycoside hydrolase [Enterococcus faecium Com12]
gi|257834203|gb|EEV60624.1| glycoside hydrolase [Enterococcus faecium Com12]
Length = 412
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 167/356 (46%), Gaps = 40/356 (11%)
Query: 73 KGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPG 132
K + +++P G +L G+ L L E+GAV+ G + +D + G+E+
Sbjct: 11 KEHSPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDTRVA---GVEM-- 65
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD--W-----------FSSQSLNY----- 174
+ +++N +D+++ G G IDGQG WW+ W + + L +
Sbjct: 66 KWPAAILNVLSAKDILIEG-KGIIDGQGEHWWELYWGEDQKSGTRAEYDRKGLRWIADYA 124
Query: 175 -SRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPD 233
RP +E+VV+ +L F + +N+ Y ++V ++ I + + P T GI D
Sbjct: 125 IKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKIIIRHN-DGPSTDGIDID 183
Query: 234 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 293
SS +V I +C +A G D I++KSG D G R ++ + I R ++ SG V GSE+
Sbjct: 184 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIR--SGYGVTIGSEV 241
Query: 294 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGS-- 351
S G+S+V + I + S GI ++++ RGG I I + + + ++ F + +
Sbjct: 242 SAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEY 301
Query: 352 HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPG 407
+ + D + +P Q ++I + Q NI + N+ S++PG
Sbjct: 302 NRKNSNDLERMPESWQAVAEEIPESK----------QMTKVRNIHVKNVQASLSPG 347
>gi|182416077|ref|YP_001821143.1| glycosyl hydrolase [Opitutus terrae PB90-1]
gi|177843291|gb|ACB77543.1| glycosyl hydrolase family 88 [Opitutus terrae PB90-1]
Length = 865
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 157/334 (47%), Gaps = 48/334 (14%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT+FGA D T A + AI + GG ++ VP+G+WLTG+ +L S++ L + K
Sbjct: 450 ITDFGAKPDADC--TDAIRAAI---DACHQAGGGRVVVPAGEWLTGAIHLRSNVNLHVAK 504
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG--QG 160
GA + + + + +V + R + + I + ++ +TG+ GT+DG
Sbjct: 505 GATLRWVFDLAKYPIV-----FTRWEGVECMNFSPFIYAWEQENIAITGE-GTLDGGSDW 558
Query: 161 SVWWDWFSSQ------------------------------SLNYSRPHLVEFISSENVVV 190
S WW W + + ++ RP+ V+ +N+++
Sbjct: 559 STWWGWNDKRDGTAPKQRAARNRLIQMGETNVPVAERVFGANDFLRPNFVQPYRCKNILI 618
Query: 191 SNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHD 250
++ + +P + +HPV N+ ++N+ + + P G P+S ++ +ED + G D
Sbjct: 619 EGVSIIRSPMWELHPVLSQNITVRNVKITS--HGPNNDGFDPESCRDILVEDTLFDTGDD 676
Query: 251 AISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY-- 308
I++KSG + G PT ++ IRR +++ G V GSE +GGI N+ VE +
Sbjct: 677 CIAIKSGRNGDGRRVNVPTENMVIRRCVMKDGHG-GVVLGSECTGGIRNIFVEDCEMDSP 735
Query: 309 DSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA 342
D G+ F+ RGG + + + + ++ + A
Sbjct: 736 DLDRGLRFKNNAVRGGVLENVFMRNVKIGRVGEA 769
>gi|319643181|ref|ZP_07997809.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520529|ref|ZP_08799916.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|423315312|ref|ZP_17293242.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|423315336|ref|ZP_17293266.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
gi|254835049|gb|EET15358.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317385085|gb|EFV66036.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392679549|gb|EIY72930.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|392679573|gb|EIY72954.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
Length = 462
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 147/323 (45%), Gaps = 41/323 (12%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
SI ++GAV G+T+NT A AI + GG ++ +P G+WLTG + S++ L LE
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPVHFKSNVNLHLE 109
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+ A++ + NPS D LP+ E + Y L+ ++ +TG GT+
Sbjct: 110 ENAILRFTDNPS-----DYLPAVMTSWEGMECYNYSPLLYAMDCENIAITG-KGTLAPIM 163
Query: 161 SVWWDWFS---------------------------SQSLNYSRPHLVEFISSENVVVSNL 193
W WF ++ N+ RPHL+ F +NV++
Sbjct: 164 DTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEF 223
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+P + IH C ++N+ V A + GI + S N IE+C+ G DA+
Sbjct: 224 KIRQSPFWTIHLYMCDGGIVRNLDVKAHGHN--NDGIDLEMSRNFLIENCVFDQGDDAVV 281
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG 313
+K+G ++ P ++ IR + + + GSEMSGG+ NV + DS+
Sbjct: 282 IKAGRNQDAWRLNTPCENIVIRHCDILKGH-TLLGIGSEMSGGVRNVYMHNCTAPDSVFR 340
Query: 314 IEF-RTTKGRGGYIRQIVISDAE 335
+ F +T RGG+I I + + +
Sbjct: 341 LFFAKTNHRRGGFIENIWMKNVK 363
>gi|336415457|ref|ZP_08595796.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
gi|335940336|gb|EGN02203.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
Length = 461
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 149/322 (46%), Gaps = 41/322 (12%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT+FGAV G+ NT A +AI ++ GG ++ VP+G WLTG + S++ L+LE+
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAI---EACNQSGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
AV+ + NPS D LP+ E L Y L+ + +V +TG GT+ +
Sbjct: 112 NAVLNFTDNPS-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 165
Query: 162 VWWDWFSS-----QSL----------------------NYSRPHLVEFISSENVVVSNLT 194
W WF ++L N+ RPHL+ F +NV++
Sbjct: 166 TWKVWFKRPQPHLEALKELYAKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFK 225
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
+P + IH C ++N+ V A + + + S N +EDC G DA+ +
Sbjct: 226 IRESPFWTIHLYMCDGGLVRNLDVKAHGHNNDDIDF--EMSRNFLVEDCSFDQGDDAVVI 283
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
K+G ++ P ++ IR + + + GSE+SGGI N+ + +S+ +
Sbjct: 284 KAGRNQDAWRLNTPCENIVIRNCQILKGH-TLLGIGSEISGGIRNIYMHDCTAPNSVMRL 342
Query: 315 EF-RTTKGRGGYIRQIVISDAE 335
F +T RGG+I + + + +
Sbjct: 343 FFVKTNHRRGGFIENVYMKNVK 364
>gi|257889043|ref|ZP_05668696.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
gi|257825106|gb|EEV52029.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
Length = 412
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 167/356 (46%), Gaps = 40/356 (11%)
Query: 73 KGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPG 132
K + +++P G +L G+ L L E+GAV+ G + +D + G+E+
Sbjct: 11 KEHSPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDTRVA---GVEM-- 65
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD--W-----------FSSQSLNY----- 174
+ +++N +D+++ G G IDGQG WW+ W + + L +
Sbjct: 66 KWPAAILNVLSAKDILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYA 124
Query: 175 -SRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPD 233
RP +E+VV+ +L F + +N+ Y ++V ++ I + + P T GI D
Sbjct: 125 IKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKIIIRHN-DGPSTDGIDID 183
Query: 234 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 293
SS +V I +C +A G D I++KSG D G R ++ + I R ++ SG V GSE+
Sbjct: 184 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIR--SGYGVTIGSEV 241
Query: 294 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGS-- 351
S G+S+V + I + S GI ++++ RGG I I + + + ++ F + +
Sbjct: 242 SAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEY 301
Query: 352 HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPG 407
+ + D + +P Q ++I + Q NI + N+ S++PG
Sbjct: 302 NRKNSNDLERMPESWQAVAEEIPESK----------QMTKVRNIHVKNVQASLSPG 347
>gi|218129054|ref|ZP_03457858.1| hypothetical protein BACEGG_00628 [Bacteroides eggerthii DSM 20697]
gi|217988689|gb|EEC55008.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 492
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 159/366 (43%), Gaps = 41/366 (11%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGA-VILGSQNPSHWDVVDPLPSYG 125
++ + +GG + +P+GKW++G L S + L + + A ++ G D + + +
Sbjct: 49 IEQLSSQGGGTVIIPAGKWISGRIELKSFVELHIARDAEIVFGG---CAEDYLPAVFTRH 105
Query: 126 RGIELPGRRYKSLINGYMLRDVVVTGD----------------NGTIDGQGSVWWDWFSS 169
G+E+ G + I ++ +TG+ NG + + WD
Sbjct: 106 EGVEIMGP--GAFIYANNQENIAITGEGRILGPDMDAEIRKRPNGASVVEKDIPWDMPVE 163
Query: 170 QSL-------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
Q + + RP + I+ NV++ +T + +N+ P+YC NV I+ I+V++
Sbjct: 164 QRIYDGMDGRTFYRPKTISPINCRNVLIEGITMERSTLWNVVPIYCENVIIRGITVNST- 222
Query: 223 ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS 282
E P GI +S NV IE C + G D +LK+G + G+ G+ T +V IR L Q
Sbjct: 223 EVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRHSLAQHG 282
Query: 283 SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA 342
G + GSE +G I N+ V + GI F+T + RGG + + N+ A
Sbjct: 283 HG-GITIGSETAGMIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSNHTIYERLRMINVGKA 341
Query: 343 F--GACGN-------CGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
F GN +P+ D P I KD I + GI E PF+
Sbjct: 342 FTWDLLGNAYYMGELAARYPERAVD-HLTPNISNTVIKDFIVESSKQFFTANGIPEIPFS 400
Query: 394 NICLSN 399
N + N
Sbjct: 401 NTLIEN 406
>gi|224536236|ref|ZP_03676775.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522122|gb|EEF91227.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
Length = 456
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 187/404 (46%), Gaps = 55/404 (13%)
Query: 38 PHSV-SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLT-GSFNLTSH 95
P S+ +T +GA D + A AI + GG + +P+G + + G+ L S+
Sbjct: 47 PDSIYDVTAYGAKSDTSFDSRPAILEAINQCNT---NGGGTVLIPAGNYFSKGAILLKSN 103
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
+ L + GA + S S D + + + G E Y I Y +V +TG GT
Sbjct: 104 VNLHIADGARLEFSTVAS--DYLPMVLTKWEGTEC--FNYSPFIYAYQCTNVALTG-KGT 158
Query: 156 IDGQGSVWWD-WFSSQ--SLN---------------------YSRPHLVEFISSENVVVS 191
IDG G+V ++ W + Q +L+ Y RP +++F +NV+V
Sbjct: 159 IDGNGAVTFNGWHALQGPALDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLVE 218
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ ++P + IHPV+C NV ++N+ + + + G P+SS NV IE+ +G D
Sbjct: 219 DVQIYDSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESSTNVLIENMDFNVGDDG 276
Query: 252 ISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL 311
I++KSG D+ G G+ T +V IR + ++ GSEMSGG+ N+ +E +
Sbjct: 277 IAIKSGRDQDGWRIGQATENVIIRNCHF---ARWAITIGSEMSGGVRNIFIEDCKIDSCR 333
Query: 312 NGIEFRTTKGRGGYIRQI----VISDAELYN-INVAFGACG-NCGSHPDDDFDPDALPAI 365
NGI F++ RGGY + + +D L+ IN G G+HP
Sbjct: 334 NGIYFKSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYRGGNHP---------TLF 384
Query: 366 DQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLSINPGS 408
I +D+ + ++A G+ EA NI L NI + P +
Sbjct: 385 RNICIEDVTCNRVDSVALMANGLPEAKLYNITLRNIKVKQAPKA 428
>gi|238006852|gb|ACR34461.1| unknown [Zea mays]
Length = 187
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 79/112 (70%), Gaps = 1/112 (0%)
Query: 41 VSITEFGAVGDGKTLNT-LAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+S+ FGA GDG+TLNT + + +GG LYVP G WLTG FNLTSH+TLF
Sbjct: 44 MSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLTSHMTLF 103
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTG 151
L +GA++ +Q+ S W ++DPLPSYGRG ELPG RY SLI+G+ L+DV +TG
Sbjct: 104 LARGAIVRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGHGLQDVFITG 155
>gi|194695268|gb|ACF81718.1| unknown [Zea mays]
Length = 120
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 82/115 (71%), Gaps = 2/115 (1%)
Query: 336 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
+ N++V GNC +HPDD FDP LPAID +T K++ GTNI++AG +GI+ APF I
Sbjct: 1 MENVHVGIEFTGNCSTHPDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAI 60
Query: 396 CLSNISLSINPGS-YNSWECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRY 449
CLSN++ S+ GS +SW CS++ G SE+VFPEPC EL + SS SSS C+SL Y
Sbjct: 61 CLSNLNFSMAAGSGPSSWSCSDVSGYSEAVFPEPCTELRDPSS-SSSVCYSLASY 114
>gi|388259231|ref|ZP_10136405.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
gi|387937189|gb|EIK43746.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
Length = 461
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 183/410 (44%), Gaps = 61/410 (14%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLT-GSFNLTSHLTLFLE 101
IT FGA D + A AI + A GG ++ +P+GKWL+ G L S + L LE
Sbjct: 60 ITAFGASADAQADARPAIMRAI---NAAAKAGGGRVVIPAGKWLSNGPVELQSRINLHLE 116
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG- 160
+GA +L S H+ + + + G E+ G Y LI + DV +TG GTIDG
Sbjct: 117 EGATLLFSAQTKHY--LPAVFTRWEGTEIYG--YSPLIYANKVTDVAITG-KGTIDGNAQ 171
Query: 161 SVWWDWFSSQSLN-----------------------YSRPHLVEFISSENVVVSNLTFLN 197
S + W Q+ + + RP L++ +++E V++ + T LN
Sbjct: 172 SEFLGWAKHQAADIAKLRQMGFDGVPLEKRQFGEGHFLRPSLIQILNAERVLLQDYTALN 231
Query: 198 APAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSG 257
+P + H VY + ++ + V + + G+ DS + +E+ G D+I++KSG
Sbjct: 232 SPFWVNHLVYTDHAQVRGVKVDSMFAN--NDGLDIDSGRWILVENNHFRTGDDSIAIKSG 289
Query: 258 WDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFR 317
D G GRP+ ++ +R L G V GSEMSGGI NV + +
Sbjct: 290 RDLDGRTIGRPSENIVVRNNLFDGEDG--VGLGSEMSGGIKNVYFTDNDYLKGTSAFRLK 347
Query: 318 TTKGRGGYIRQIVISDAE------LYNINVAFGACGNCGSHP----DDDFDPDALPAIDQ 367
RGG + + I + + L+ ++++ A G+ P D F+ + +D
Sbjct: 348 ANLDRGGSVEHVRIRNMKIGSAKYLFWFDLSYVAGYLGGNFPSRYQDIVFENITVDKVDT 407
Query: 368 I---------TFKDIIGTNITIAGN-----FTGIQEAPFANICLSNISLS 403
+D++ NI + + FTG++ F+++ ++ +S
Sbjct: 408 FFISHAPEVQPLQDVLFKNIKVKSSGEFMEFTGLKNVTFSDVEVNGQKMS 457
>gi|300728468|ref|ZP_07061828.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299774269|gb|EFI70901.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 466
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 152/341 (44%), Gaps = 53/341 (15%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
++VSI + G GDG T NT AF+ AI L GG L VP+G +LTG + ++ L
Sbjct: 45 NTVSILDCGGKGDGITSNTEAFRKAISKLSKL---GGGHLNVPAGIYLTGLISFKDNIDL 101
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LEK A+I+ S++ + + PG IN +++ +TG+ G IDG
Sbjct: 102 HLEKNAIIVFSEDKKEF--IKEENGVKDDKATPG------INASKRKNISITGE-GIIDG 152
Query: 159 QGSVW------------WDWFSS---------------------------QSLNYSRPHL 179
G W W+ F + ++ R HL
Sbjct: 153 NGEWWRPVKRSKVSNTEWNDFKAMGGTESAKGDLWYPFNLKHFDNIAATPEAQEKMRTHL 212
Query: 180 VEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVC 239
+ ENV++ +T N+P ++I P C NV I ++V P + I + NV
Sbjct: 213 IRLTDCENVLIQGVTVENSPKFHIVPQRCKNVIIDGVTVRCPWNAQNGDAIDIGNCTNVL 272
Query: 240 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 299
I + +I G D I +K G + YG P +++I+ ++ + G V GSE SGG+ N
Sbjct: 273 IVNNVIDAGDDGICMKGGAGAKALEYG-PCLNINIQDNIVYHAHGGFV-IGSEFSGGMKN 330
Query: 300 VQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN 340
+ V + + F+++ GRGG I IS+ + +I+
Sbjct: 331 IYVHNNTFSGTDTELRFKSSVGRGGTTEDIYISNIYMTDID 371
>gi|291615877|ref|YP_003518619.1| Pgl [Pantoea ananatis LMG 20103]
gi|378769045|ref|YP_005197520.1| polygalacturonase [Pantoea ananatis LMG 5342]
gi|386018057|ref|YP_005936358.1| polygalacturonase Pgl [Pantoea ananatis AJ13355]
gi|386081132|ref|YP_005994657.1| polygalacturonase Pgl [Pantoea ananatis PA13]
gi|291150907|gb|ADD75491.1| Pgl [Pantoea ananatis LMG 20103]
gi|327396140|dbj|BAK13562.1| polygalacturonase Pgl [Pantoea ananatis AJ13355]
gi|354990313|gb|AER34437.1| polygalacturonase Pgl [Pantoea ananatis PA13]
gi|365188533|emb|CCF11483.1| polygalacturonase [Pantoea ananatis LMG 5342]
Length = 443
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 169/371 (45%), Gaps = 28/371 (7%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+S+ +F V DG+T +T Q AI A GG +L +P G++ +G NL S L L
Sbjct: 3 LSLGDFHPVADGETPDTRILQQAI---DQIAAAGGGRLTLPPGRYRSGCLNLPSDFELHL 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
E GAV++ S++ + + + + + + L+ R++ +TG G I+G
Sbjct: 60 EAGAVLVASRHLADY-------QQWKALSCAEKSHNVLLYALGQRNLTITG-QGHIEGDA 111
Query: 161 SVWW----DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
W+ D + RP ++ F E V + +++ + AP + +H V C +VHI+ +
Sbjct: 112 EAWFAAEPDEQGYRVPKADRPRMIVFEDCEQVRLQDISLIRAPMWTVHLVSCRHVHIERL 171
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ P T + DS + V I + + DAI +K+ + G+ RP + +
Sbjct: 172 TIDNAMTLPNTDALDIDSCEAVFISNSYFSAADDAICIKTTFKPAGLR--RPARRIAVSN 229
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
LL+S S ++ G+E I ++ V L+DS GI + GG IR+++ S
Sbjct: 230 CLLRSDS-CALKIGTETWDDIEDITVSGCTLFDSNRGIGIVSRD--GGAIRRVLFSTIAF 286
Query: 337 YNINVAFGACGNCGSHP----DDDFDPDALPAI-DQITFKDIIGTNITIAGNFTGIQEAP 391
+VA AC + P DP LP I +Q+ F + G A N Q
Sbjct: 287 SCHHVA--ACHWGKADPIFISVRTRDPAVLPGIVEQVQFSQLSGV-AEGAINLHAAQPGW 343
Query: 392 FANICLSNISL 402
+I L+ + L
Sbjct: 344 IRDISLNQLHL 354
>gi|237712598|ref|ZP_04543079.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423229037|ref|ZP_17215442.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|423244877|ref|ZP_17225951.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
gi|229453919|gb|EEO59640.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634790|gb|EIY28702.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|392640918|gb|EIY34709.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
Length = 462
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 147/323 (45%), Gaps = 41/323 (12%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
SI ++GAV G+T+NT A AI + GG ++ +P G+WLTG + S++ L LE
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPIHFQSNVNLHLE 109
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+ A++ + NPS D LP+ E + Y L+ ++ +TG GT+
Sbjct: 110 ENAILRFTDNPS-----DYLPAVMTSWEGMECYNYSPLLYAMDCENIAITG-KGTLAPIM 163
Query: 161 SVWWDWFS---------------------------SQSLNYSRPHLVEFISSENVVVSNL 193
W WF ++ N+ RPHL+ F +NV++
Sbjct: 164 DTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEF 223
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+P + IH C ++N+ V A + GI + S N IE+C+ G DA+
Sbjct: 224 KIRQSPFWTIHLYMCDGGIVRNLDVKAHGHN--NDGIDLEMSCNFLIENCVFDQGDDAVV 281
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG 313
+K+G ++ P ++ IR + + + GSEMSGG+ NV + DS+
Sbjct: 282 IKAGRNQDAWRLNTPCENIVIRHCDILKGH-TLLGIGSEMSGGVRNVYMHNCTAPDSVFR 340
Query: 314 IEF-RTTKGRGGYIRQIVISDAE 335
+ F +T RGG+I I + + +
Sbjct: 341 LFFAKTNHRRGGFIENIWMKNVK 363
>gi|322436856|ref|YP_004219068.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321164583|gb|ADW70288.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 414
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 169/384 (44%), Gaps = 47/384 (12%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
+ GA GDG T +T A Q AI GG K+L+G + S +TL +E
Sbjct: 25 VKTMGAKGDGVTKDTEAIQKAIDTCTVVTLSGG--------KFLSGPLEIKSGVTLDVET 76
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
GA++LGS + + + + + LP + ++N +V +TG GTIDGQG V
Sbjct: 77 GAMLLGSTDRADYKAATLMR---QPTVLP---FLHIVNA---DNVKITG-GGTIDGQGKV 126
Query: 163 WWDWFSSQSL------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
WWD+ ++ RP + S++V V N+T NA + + P Y + ++
Sbjct: 127 WWDYVKGAKDAGVLGNDHPRPMGLLIDHSKHVTVENITIQNAGFWQVVPYYSDYLVFSHL 186
Query: 217 SVHAPPE-SPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
V AP +P T GI P SS ++ I+ ++G D I++KSG A P D
Sbjct: 187 RVLAPQRGAPNTDGIDPFSSSHIKIDHYFSSVGDDNIAIKSG------AINSPGPDAPSE 240
Query: 276 RVLLQS---SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVIS 332
+++ SG ++ GSE++GG+ +V E+I + GI + + RG +
Sbjct: 241 DIVITDCIFESGHGLSIGSEIAGGVHHVHAERISFKGTDQGIRVKANRDRGNDTSDLTFK 300
Query: 333 DAELYNINVAFGAC---------GNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGN 383
D + ++ + G S P P I +++ N AG
Sbjct: 301 DITMDDVRTSILISEYYPKAMPEGEVASAPITRL----TPHFHDIHIENVKSVNSDWAGV 356
Query: 384 FTGIQEAPFANICLSNISLSINPG 407
G+ E+P +I L N+S+ G
Sbjct: 357 IVGLPESPVTDISLKNVSIQAKKG 380
>gi|397170830|ref|ZP_10494240.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
gi|396087304|gb|EJI84904.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
Length = 481
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 178/409 (43%), Gaps = 64/409 (15%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
S SIT+FGA NT A A + + A GG ++ +P G++ TG+ +L S++ L
Sbjct: 65 RSFSITDFGAAAKAGFDNTAAIAAA---IAACAAAGGGRVLIPGGRFETGAIHLKSNVNL 121
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
L V+ + H+ + + + G+EL G Y LI Y ++ +TG NG ++G
Sbjct: 122 HLADDTVLSFYTDRKHY--LPYVMTRWEGVELMG--YSPLIYAYQQENIALTG-NGILEG 176
Query: 159 QGSV--WWDWFSSQSL-----------------------------------NYSRPHLVE 181
G+V WW W N+ RP ++
Sbjct: 177 NGAVDAWWPWKGDWERRNWDYDASVDQVKTRSPLFEMAERGVPVSERVFNENFLRPPFIQ 236
Query: 182 FISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIE 241
+ V++ +T N+P + I+PV +V ++N V+ P + G P+S + V IE
Sbjct: 237 PYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRN--VNCISYGPNSDGCNPESCNRVLIE 294
Query: 242 DCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQ 301
+C+ G D I+LKSG + G P +V I+ ++++ G V GSE+SGG N+
Sbjct: 295 NCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHG-GVVMGSEISGGARNIF 353
Query: 302 VEKIHLY--DSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA-----FGACGNCGSHPD 354
+ + + GI +T RGG I + I D E+ + A F G+ G+
Sbjct: 354 ARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEGDAGNF-- 411
Query: 355 DDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
+P ++ + ++ A G + AP + + L ++ +
Sbjct: 412 -------MPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFN 453
>gi|423226065|ref|ZP_17212531.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392630583|gb|EIY24571.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 466
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 187/404 (46%), Gaps = 55/404 (13%)
Query: 38 PHSV-SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLT-GSFNLTSH 95
P S+ +T +GA D + A AI + GG + +P+G + + G+ L S+
Sbjct: 57 PDSIYDVTAYGAKSDTSFDSRPAILEAINQCNT---NGGGTVLIPAGNYFSKGTILLKSN 113
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
+ L + GA + S S D + + + G E Y I Y +V +TG GT
Sbjct: 114 VNLHVADGARLEFSTVAS--DYLPMVLTKWEGTEC--FNYSPFIYAYQCTNVALTG-KGT 168
Query: 156 IDGQGSVWWD-WFSSQ--SLN---------------------YSRPHLVEFISSENVVVS 191
IDG G+V ++ W + Q +L+ Y RP +++F +NV+V
Sbjct: 169 IDGNGAVTFNGWHALQGPALDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLVE 228
Query: 192 NLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDA 251
++ ++P + IHPV+C NV ++N+ + + + G P+SS NV IE+ +G D
Sbjct: 229 DVQIYDSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESSTNVLIENMDFNVGDDG 286
Query: 252 ISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL 311
I++KSG D+ G G+ T +V IR + ++ GSEMSGG+ N+ +E +
Sbjct: 287 IAIKSGRDQDGWRIGQATENVIIRNCHF---ARWAITIGSEMSGGVRNIFIEDCKIDSCR 343
Query: 312 NGIEFRTTKGRGGYIRQI----VISDAELYN-INVAFGACG-NCGSHPDDDFDPDALPAI 365
NGI F++ RGGY + + +D L+ IN G G+HP
Sbjct: 344 NGIYFKSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYRGGNHP---------TLF 394
Query: 366 DQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLSINPGS 408
I +D+ + ++A G+ EA NI L NI + P +
Sbjct: 395 RNICIEDVTCNRVDSVALMANGLPEAKLYNITLRNIKVKQAPKA 438
>gi|393764308|ref|ZP_10352920.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
gi|392604938|gb|EIW87837.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
Length = 481
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 178/409 (43%), Gaps = 64/409 (15%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
S SIT+FGA NT A A + + A GG ++ +P G++ TG+ +L S++ L
Sbjct: 65 RSFSITDFGAAAKAGFDNTAAIAAA---IAACAAAGGGRVLIPGGRFETGAIHLKSNVNL 121
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
L V+ + H+ + + + G+EL G Y LI Y ++ +TG NG ++G
Sbjct: 122 HLADDTVLSFYTDREHY--LPYVMTRWEGVELMG--YSPLIYAYQQENIALTG-NGILEG 176
Query: 159 QGSV--WWDWFSSQSL-----------------------------------NYSRPHLVE 181
G+V WW W N+ RP ++
Sbjct: 177 NGAVDAWWPWKGQWERRNWDYDASVDQVKTRSPLFEMAERGVPVSERVFNENFLRPPFIQ 236
Query: 182 FISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIE 241
+ V++ +T N+P + I+PV +V ++N V+ P + G P+S + V IE
Sbjct: 237 PYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRN--VNCISYGPNSDGCNPESCNRVLIE 294
Query: 242 DCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQ 301
+C+ G D I+LKSG + G P +V I+ ++++ G V GSE+SGG N+
Sbjct: 295 NCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHG-GVVMGSEISGGARNIF 353
Query: 302 VEKIHLY--DSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA-----FGACGNCGSHPD 354
+ + + GI +T RGG I + I D E+ + A F G+ G+
Sbjct: 354 ARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEGDAGNF-- 411
Query: 355 DDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
+P ++ + ++ A G + AP + + L ++ +
Sbjct: 412 -------MPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFN 453
>gi|315570520|gb|ADU33264.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 407
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 173/382 (45%), Gaps = 27/382 (7%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++T+FGA GK +T A AI K+ D GG + G++L+G F L S++TL +
Sbjct: 24 NVTDFGADSTGKNASTTAITKAID--KASEDYGGVVRFT-KGQYLSGPFELKSNITLQFD 80
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
V+ +P + + L G LP Y LI +++R+VV+ G +DG G+
Sbjct: 81 DDVVLKFLDDPKEYPPLTKLLPNGLTFSLP---YTPLIRAFIVRNVVIRG-KAILDGNGA 136
Query: 162 VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
WW + +RP + F S N+ V ++ N+P YNI +Y +V ++ IS+ P
Sbjct: 137 PWWKRLPPPN---ARPQFLFFYQSYNITVEDVAIRNSPMYNIQLIYTDHVLLKGISIKNP 193
Query: 222 PE----SPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRR 276
P P T GI + + + + + G D ++L + + GR PT + I
Sbjct: 194 PSYVDPGPNTDGINCNPCRYLHVTNVTVDTGDDCVALDADLGDK--LMGRWPTEHILIEN 251
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ + G +V+ GS + G+ N+ V + G+ +T +GRGG + I + +
Sbjct: 252 SHMFAGHG-AVSIGSATTAGLRNITVRNCIFNGTDRGLYIKTRRGRGGLVEDIHYHNITM 310
Query: 337 YNIN---VAFGACGNC---GSHPDD-DFDP--DALPAIDQITFKDIIGTNITIAGNFTGI 387
NI VA A N G H + + P D P I I ++ I G + + G+
Sbjct: 311 LNIRKEGVAIAAVYNGTDEGMHERNIHWVPIDDTTPFIRNIRYRGIRGNSKLESLFIVGL 370
Query: 388 QEAPFANICLSNISLSINPGSY 409
E ++ L + + G +
Sbjct: 371 PERQVLDVILDDFHVQSEKGIF 392
>gi|308189023|ref|YP_003933154.1| polygalacturonase [Pantoea vagans C9-1]
gi|308059533|gb|ADO11705.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 444
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 158/347 (45%), Gaps = 33/347 (9%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+S+ +F V DG+T +T Q A + A GG +L +P+G++ +G NL S L L
Sbjct: 4 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 60
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
E GAV++ S + + V + + + + L+ R+++++G G IDG+G
Sbjct: 61 EAGAVLIASPRLADYQAV-------QALSCAEKSHNVLLYALGQRNIIISG-TGRIDGEG 112
Query: 161 SVWW----DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
W+ D + RP ++ F E V ++ T + AP + +H V C +VHI ++
Sbjct: 113 EAWFAAERDEQGYRLPRADRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 172
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ P T + DS + V + + ++ DAI +K+ A RP + I
Sbjct: 173 TIDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKT--THKPAALRRPARQIMITN 230
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
LL+S S + G+E + +V V ++DS GI + GG +R+++ S
Sbjct: 231 CLLRSYS-CAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSRD--GGAMRRLLFS---- 283
Query: 337 YNINVAFGACGNCGSHPDDDF-------DPDALPAI-DQITFKDIIG 375
N+ A C D DP P I +Q+ F ++ G
Sbjct: 284 -NLTFACHHAPPCHWGKADPLHISVRRRDPAITPGIVEQVQFSNLTG 329
>gi|212690918|ref|ZP_03299046.1| hypothetical protein BACDOR_00406 [Bacteroides dorei DSM 17855]
gi|212666150|gb|EEB26722.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 462
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 147/323 (45%), Gaps = 41/323 (12%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
SI ++GAV G+T+NT A AI + GG ++ +P G+WLTG + S++ L LE
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPIHFQSNVNLHLE 109
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+ A++ + NPS D LP+ E + Y L+ ++ +TG GT+
Sbjct: 110 ENAILRFTDNPS-----DYLPAVMTSWEGMECYNYSPLLYAMDCENIAITG-KGTLAPIM 163
Query: 161 SVWWDWFS---------------------------SQSLNYSRPHLVEFISSENVVVSNL 193
W WF ++ N+ RPHL+ F +NV++
Sbjct: 164 DTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEF 223
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+P + IH C ++N+ V A + GI + S N IE+C+ G DA+
Sbjct: 224 KIRQSPFWTIHLYMCDGGIVRNLDVKAHGHN--NDGIDLEMSCNFLIENCVFDQGDDAVV 281
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG 313
+K+G ++ P ++ IR + + + GSEMSGG+ NV + DS+
Sbjct: 282 IKAGRNQDAWRLNTPCENIVIRHCDILKGH-TLLGIGSEMSGGVRNVYMHNCTAPDSVFR 340
Query: 314 IEF-RTTKGRGGYIRQIVISDAE 335
+ F +T RGG+I I + + +
Sbjct: 341 LFFAKTNHRRGGFIENIWMKNVK 363
>gi|340347489|ref|ZP_08670597.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433653517|ref|YP_007297371.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339609185|gb|EGQ14060.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433304050|gb|AGB29865.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 472
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 169/383 (44%), Gaps = 66/383 (17%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
SVS+ ++GAVGDG T+NT AF A + A +GG L VP+G WLTG L ++ L
Sbjct: 50 SVSLKDYGAVGDGLTMNTRAFAKA---MADLAKRGGGHLNVPAGIWLTGPIVLKDNIDLH 106
Query: 100 LEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSL--INGYMLRDVVVTGDNGTID 157
L++ A+IL S P D + G+ K + ++ ++ VTG+ G ID
Sbjct: 107 LDRNALILFS--PDKRDFL---------TATDGKAAKVVPCLSASKRSNIAVTGE-GIID 154
Query: 158 GQGSVW------------WDWFSS---------------------------QSLNYSRPH 178
G G W W+ + + ++ R H
Sbjct: 155 GNGEYWRPVKRSKVSDTEWNQYRAMGGTVTAKGDLWYPFGLKHEPDVAEDHEAQERMRQH 214
Query: 179 LVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNV 238
LV F V+V +T NAP +++ P C++V + I+V P + I + NV
Sbjct: 215 LVRFTDCRRVLVQGVTLRNAPRFHLVPQRCTDVIVDGITVACPWNAQNGDAIDIGNCRNV 274
Query: 239 CIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGIS 298
I + I G D I +K G G A G P +++I+ + + G V GSE SGG++
Sbjct: 275 LIVNNTINAGDDGICMKGGAGAKGAADG-PCENINIQDNRVYHAHGGFV-IGSEFSGGMN 332
Query: 299 NVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNIN---VAFGAC----GNCGS 351
N+ V + + G+ F++ GRGG R I IS + +I + F C + G+
Sbjct: 333 NIYVHRNTFAGTDTGLRFKSATGRGGTTRDIHISQIYMTDIKDEAIVF-ECDYTDNHVGA 391
Query: 352 HPDDDFDPDALPAIDQITFKDII 374
+ + D LP I D++
Sbjct: 392 GAQKNAETDFLPEFTDIHISDVV 414
>gi|427383838|ref|ZP_18880558.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
gi|425728543|gb|EKU91401.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
Length = 1068
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 147/321 (45%), Gaps = 39/321 (12%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
I ++GA+ DGKT NT A AI + + GG ++ VP+G+WLTG + S++ L L +
Sbjct: 57 INKYGAIADGKTNNTKAIARAI---AACSRAGGGRVVVPAGEWLTGPIHFKSNVNLHLSE 113
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
AV+ + NP D + + + G+E Y L+ + ++ +TG GT+
Sbjct: 114 NAVLRFTDNPD--DYLPAVMTSWEGMEC--YNYSPLVYAFDCENIAITG-TGTLQPIMDT 168
Query: 163 WWDWFS---------------------------SQSLNYSRPHLVEFISSENVVVSNLTF 195
W WF ++ N+ RPHL+ F +NV++
Sbjct: 169 WRKWFKRPQPHMDALAELYTMASTDVPVKERQMAKGENHLRPHLIHFNRCQNVLLDQFKI 228
Query: 196 LNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLK 255
+P + IH C ++N+ V A + G+ + S N +E+C G DA+ +K
Sbjct: 229 RESPFWTIHLYLCDGGIVRNLDVRAHGHN--NDGVDLEMSRNFLVENCKFDQGDDAVVIK 286
Query: 256 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 315
+G ++ P ++ IR + + + GSEMSGGI NV + DS+ +
Sbjct: 287 AGRNQDAWRLDTPCENIVIRNCDIIKGH-TLLGIGSEMSGGIRNVYMHDCAAPDSVFRLF 345
Query: 316 F-RTTKGRGGYIRQIVISDAE 335
F +T RGG+I I + + +
Sbjct: 346 FAKTNHRRGGFIENIHMENVK 366
>gi|265752277|ref|ZP_06088070.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|263237069|gb|EEZ22539.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 462
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 147/323 (45%), Gaps = 41/323 (12%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
SI ++GAV G+T+NT A AI + GG ++ +P G+WLTG + S++ L LE
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPVHFQSNVNLHLE 109
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+ A++ + NPS D LP+ E + Y L+ ++ +TG GT+
Sbjct: 110 ENAILRFTDNPS-----DYLPAVMTSWEGMECYNYSPLLYAMDCENIAITG-KGTLAPIM 163
Query: 161 SVWWDWFS---------------------------SQSLNYSRPHLVEFISSENVVVSNL 193
W WF ++ N+ RPHL+ F +NV++
Sbjct: 164 DTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEF 223
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+P + IH C ++N+ V A + GI + S N IE+C+ G DA+
Sbjct: 224 KIRQSPFWTIHLYMCDGGIVRNLDVKAHGHN--NDGIDLEMSCNFLIENCVFDQGDDAVV 281
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG 313
+K+G ++ P ++ IR + + + GSEMSGG+ NV + DS+
Sbjct: 282 IKAGRNQDAWRLNTPCENIVIRHCDILKGH-TLLGIGSEMSGGVRNVYMHNCTAPDSVFR 340
Query: 314 IEF-RTTKGRGGYIRQIVISDAE 335
+ F +T RGG+I I + + +
Sbjct: 341 LFFAKTNHRRGGFIENIWMKNVK 363
>gi|315570532|gb|ADU33270.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 394
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 164/368 (44%), Gaps = 21/368 (5%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
+T +GA G+ T A AI K GG ++ PSG++LTG L S++ + +
Sbjct: 21 VTRYGADRTGRVPCTDAIARAI---KDAEIHGGGLIHFPSGRYLTGPIELKSNMVMDVGT 77
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
G +I +P+ + +D G+ +P + LI + ++V + G+ DG+G +
Sbjct: 78 GTIITFLDDPALYPPLDVTLPDGQRRSVP---FTPLIRAWGQKNVGIRGNKVIFDGRGEI 134
Query: 163 WWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
WWD + +RP V F NVV+ T ++P +N++ ++ S + I + + P
Sbjct: 135 WWDRLPPPA---TRPIFVNFFDCHNVVLKGFTIKSSPMFNVNILHSSGIVIDGVRIRNPE 191
Query: 223 ----ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRV 277
P T GI S V I +A G D + + +G R PT DV I
Sbjct: 192 SYHGRGPNTDGINLVSVRKVHITGVDVATGDDCVVFNA----WGYLKERVPTEDVLIENS 247
Query: 278 LLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELY 337
+ G +++ GS +GG+ N+ V + + G++ +T + RGG I I + +
Sbjct: 248 YMSVGHG-AISIGSVTAGGLRNITVRNCVIDGTTRGLDIKTNRQRGGTIENINYYNITMN 306
Query: 338 NINVAFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 395
+ A + + D + P D P I I F +I G+ G+ EAP NI
Sbjct: 307 RVRWEGIALIDLFNDNDPSWKPIGDQTPFIRNIRFDNIRGSCDRNPILVQGLPEAPIENI 366
Query: 396 CLSNISLS 403
+SN +
Sbjct: 367 EISNTDIR 374
>gi|375148592|ref|YP_005011033.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062638|gb|AEW01630.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 482
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 153/310 (49%), Gaps = 26/310 (8%)
Query: 38 PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLT 97
P + IT +GAV DGKT+NT A Q AI KGG ++ P+G WL+G+ L +T
Sbjct: 22 PVIIDITRYGAVADGKTINTAAIQKAI---DECHQKGGGKVVFPAGSWLSGTIVLKDQVT 78
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
L +K A +LGS + + + +DP + G G+++ +L+ +++ + GD G ID
Sbjct: 79 LQFDKDARLLGSTDINDYQNIDPF-TDGLGVDVGW----ALLVAVDAKNIGIEGD-GAID 132
Query: 158 GQGS------VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNV 211
GQG+ + D RP LV + ENV V +T A A+ H +
Sbjct: 133 GQGAKLKEQQITTDTRPESQRWGRRPFLVRIVRCENVTVKGITLNYAAAWTSHYFQSKKI 192
Query: 212 HIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTD 271
I+N+ + + + + GI D +V I++C I G DA+ K+ A ++
Sbjct: 193 TIENVKIVSHGVA-HNDGIDIDGCQDVRIKNCDIVSGDDALCFKT------TASTMACSN 245
Query: 272 VHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIRQIV 330
+ + + L+S+ G ++ G+E N+ + ++YD+ N GI+ T G ++R +
Sbjct: 246 IVVSGMRLKSNQG-AIKMGTESMAPFENITITGCYIYDTNNGGIKLLTVD--GAHLRNVN 302
Query: 331 ISDAELYNIN 340
ISD + N+
Sbjct: 303 ISDITMVNVK 312
>gi|389574386|ref|ZP_10164450.1| glycoside hydrolase [Bacillus sp. M 2-6]
gi|388425994|gb|EIL83815.1| glycoside hydrolase [Bacillus sp. M 2-6]
Length = 463
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 153/325 (47%), Gaps = 52/325 (16%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++ +GA G L+T A Q+AI G ++ +P G +LTG+ L S++ L L
Sbjct: 55 NVIHYGADNKGIELSTNAIQSAIDDAHRLK---GGRVLIPEGTFLTGALELKSNVELHLH 111
Query: 102 KGAVILGSQNPSHWDVVDPLP---SYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ A + SQ D D LP + GIEL Y LI + ++ +TG GT+DG
Sbjct: 112 ENAYVSFSQ-----DTRDYLPLVLTRYEGIEL--YNYSPLIYAHHAENIAITG-AGTLDG 163
Query: 159 QGSV--WWDW-----------FSSQSL------------------NYSRPHLVEFISSEN 187
+G WW W Q L +Y R ++ + +N
Sbjct: 164 RGDEHHWWPWKYGTNGQPSQDRDRQLLFEMAEKRIPVEERVFGEGHYLRSSFIQPYNCQN 223
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAM 247
+++ +T ++P + +HPV NV ++ +++ P T G+ P+S +V IEDC
Sbjct: 224 ILIEGVTVKDSPMWQVHPVLSENVIVRGVNIIG--HGPNTDGVNPESCRHVLIEDCYFDN 281
Query: 248 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 307
G D I++KSG +E G G P+ ++ IRR ++ G V GSE+SGG+ V E ++
Sbjct: 282 GDDCIAIKSGRNEDGRRIGVPSENIVIRRNTMRDGHG-GVTIGSEISGGVKYVYAED-NV 339
Query: 308 YDSLN---GIEFRTTKGRGGYIRQI 329
DS N + +T RGG I I
Sbjct: 340 MDSPNLDRALRIKTNSVRGGTIEHI 364
>gi|372210444|ref|ZP_09498246.1| polygalacturonase [Flavobacteriaceae bacterium S85]
Length = 469
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 190/423 (44%), Gaps = 58/423 (13%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++ ++GA+ DGKT+NT A QN I + A GG + + G +++G+ L H+TL ++
Sbjct: 24 NVNDYGALADGKTVNTKAIQNTI---DACAKAGGGTVVLEGGTFVSGTLLLKDHVTLHIK 80
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGR-RYKSLINGYMLRDVVVTGDNGTIDGQG 160
+ + +LGS NP+ + +D ++ G+ R K L+ ++V +TG GTIDGQG
Sbjct: 81 ENSTLLGSSNPNDYQSIDAF------VDATGQLRGKCLVGAIDAKNVAITG-KGTIDGQG 133
Query: 161 SVWWDWFSSQSL---------------------------NYSRPHLVEFISSENVVVSNL 193
++ ++L N+ RP L+ + V + ++
Sbjct: 134 HLFTRAKVKETLKKLGQKEKVDEVKTNNNKALYAGGKVGNFDRPFLLRLVRVNGVQLKDI 193
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
A+ +H C+N + I +H+ I DSS + I++C I G DAI
Sbjct: 194 HLRQPAAWTVHFFQCTNFLVDGIDIHSHANKNND-AIDIDSSTHGEIKNCTIDSGDDAIC 252
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG 313
KS +P++DV +++ ++S G ++ FG+E G +N+ ++ ++D+ G
Sbjct: 253 FKS-------TSPKPSSDVVVKKCKIKSEWG-AIKFGTESMGDFTNITIKDCFIHDTRGG 304
Query: 314 IEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDI 373
+ G I + I + E+ N+ + D + I+ +T +++
Sbjct: 305 -GIKILSVDGANINNVCIENIEMTNVEMPIFIRLGERRLVYRDAKRQPVGTINNVTIRNV 363
Query: 374 IGTNITIAGN---------FTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESV 424
T +I + FTG +I L +I ++++ G + + + +E+
Sbjct: 364 KATTRSIENSRVNPSTGFFFTGTPNHKIGSIELEDIQITLS-GKGTAEDAKIVVPENETQ 422
Query: 425 FPE 427
+PE
Sbjct: 423 YPE 425
>gi|330996084|ref|ZP_08319977.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
gi|329573855|gb|EGG55436.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
Length = 466
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 147/320 (45%), Gaps = 41/320 (12%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT +GA GK LNT A A+ + GG ++ VP+G+WLTG +L S++ L LEK
Sbjct: 55 ITRYGAKEGGKVLNTKAIARAV---DACHRAGGGRVVVPAGEWLTGPVHLKSNVNLHLEK 111
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GAV+ + P +D LP+ E + Y L+ Y ++ +TG +GT+ +
Sbjct: 112 GAVLSFTDTP-----LDYLPAVMTSWEGMECYNYSPLVYAYDCENIAITG-SGTLAPRME 165
Query: 162 VWWDWFS---------------------------SQSLNYSRPHLVEFISSENVVVSNLT 194
W WF+ ++ N RPHL+ NV++ + +
Sbjct: 166 TWKKWFARPQAHMDALKKLYEMASTDIAVEKRQMAEGENNLRPHLIHLNRCRNVLLEDFS 225
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
+P + IH C ++ + V A + GI + S + IE+C G DA+ +
Sbjct: 226 IRESPFWTIHLYMCKGGIVRRLDVKANGHN--NDGIDLEMSRDFLIENCTFDQGDDAVVI 283
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
KSG + P+ ++ IR + + + + GSE+SGGI N+ + + S+ +
Sbjct: 284 KSGRNRDAWRLDTPSENIVIRNCKILAGH-TLLGIGSELSGGIRNIFMHHCDVLGSVRCL 342
Query: 315 EF-RTTKGRGGYIRQIVISD 333
F +T RGG++ I + D
Sbjct: 343 FFIKTNCRRGGFVENIHLED 362
>gi|139438280|ref|ZP_01771833.1| Hypothetical protein COLAER_00822 [Collinsella aerofaciens ATCC
25986]
gi|133776477|gb|EBA40297.1| polygalacturonase (pectinase) [Collinsella aerofaciens ATCC 25986]
Length = 531
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 179/415 (43%), Gaps = 52/415 (12%)
Query: 33 TLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNL 92
T P ++++ + GA GD + +T Q AI A ++ +P+G + S L
Sbjct: 73 TTPAEPFTINVRDCGAKGDAEHDDTTNIQAAIM-----ACPKDGRVLIPAGSYRIKSLFL 127
Query: 93 TSHLTLFLEKGAVILGSQNPSHWDVV---------------DPLPSYGRGIELPGRRYKS 137
S++ + L GAV+L + + + D LP GR Y S
Sbjct: 128 KSNINIELVDGAVLLARHDRAALAYIPGTVTGNEGAGYAGTDMLP-LGRWEGESFSTYCS 186
Query: 138 LINGYMLRDVVVTGDNGTIDGQGSV----WWD------WFSSQSLNYSRPHLVEFISSEN 187
G + DV + G G IDGQ WW+ + + +RP ++ +N
Sbjct: 187 TFTGLGVHDVCIYG-RGAIDGQTDFAEDNWWNKDFKNIFRPEEGREVARPRMIFLSECQN 245
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAM 247
V ++ T N+PA+NIHPV C +V +S+ P S T G P+S V I C ++
Sbjct: 246 VSLAGFTVRNSPAWNIHPVLCEHVDALCLSIEGPKNSHNTDGFDPESCGFVRILGCQFSV 305
Query: 248 GHDAISLKSGWDEYGIAYG-RPTT-DVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKI 305
G D I++KSG + GI RP T DV I + G +V GSE +GGI ++ V K
Sbjct: 306 GDDCIAIKSG--KLGIEPELRPATHDVLISHCYMHDGHG-AVVLGSEAAGGIKDLTVSKC 362
Query: 306 HLYDSLNGIEFRTTKGRG------GYIRQIVISDAELYNINV-AFGACGNCGSHPDDDFD 358
+ G+ +T +GRG G + + D L V +F C G D
Sbjct: 363 LFERTDRGLRVKTRRGRGKDAVNEGITFEHIRMDEVLTPFVVNSFYFCDKDGK-TDYVQS 421
Query: 359 PDALPAIDQ------ITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLSINP 406
+ALP D+ TF DI TN A + TG+ E+ + ++ ++ P
Sbjct: 422 REALPVDDRTPGFGATTFCDIEATNCHAAAAYITGLPESKVTRLTFQDVHVTFAP 476
>gi|345512498|ref|ZP_08792024.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229435434|gb|EEO45511.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 462
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 147/323 (45%), Gaps = 41/323 (12%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
SI ++GAV G+T+NT A AI + GG ++ +P G+WLTG + S++ L LE
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPVHFQSNVNLHLE 109
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+ A++ + NPS D LP+ E + Y L+ ++ +TG GT+
Sbjct: 110 ENAILRFTDNPS-----DYLPAVMTSWEGMECYNYSPLLYAMDCENIAITG-KGTLAPIM 163
Query: 161 SVWWDWFS---------------------------SQSLNYSRPHLVEFISSENVVVSNL 193
W WF ++ N+ RPHL+ F +NV++
Sbjct: 164 DTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEF 223
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+P + +H C ++N+ V A + GI + S N IE+C+ G DA+
Sbjct: 224 KIRQSPFWTVHLYMCDGGIVRNLDVKAHGHN--NDGIDLEMSRNFLIENCVFDQGDDAVV 281
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG 313
+K+G ++ P ++ +R + + + GSEMSGG+ NV + DS+
Sbjct: 282 IKAGRNQDAWRLNTPCENIVVRHCNILKGH-TLLGIGSEMSGGVRNVYMHNCTAPDSVFR 340
Query: 314 IEF-RTTKGRGGYIRQIVISDAE 335
+ F +T RGG+I I + + +
Sbjct: 341 LFFAKTNHRRGGFIENIWMKNVK 363
>gi|375109255|ref|ZP_09755504.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
gi|374570559|gb|EHR41693.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
Length = 481
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 180/409 (44%), Gaps = 64/409 (15%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
S SIT+FGA NT A A + + A GG ++ +P G++ TG+ +L S++ L
Sbjct: 65 RSFSITDFGAAAKAGFDNTAAIAAA---IAACAAAGGGRVLIPGGRFETGAIHLKSNVNL 121
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
L V+ + H+ + + + G+EL G Y LI Y ++ +TG NG ++G
Sbjct: 122 HLADDTVLSFYTDREHY--LPYVMTRWEGVELMG--YSPLIYAYQQENIALTG-NGILEG 176
Query: 159 QGSV--WWDW--------------------------FSSQSL---------NYSRPHLVE 181
G+V WW W + + + N+ RP ++
Sbjct: 177 NGAVDAWWPWKGHWERRNWDYDASVDQVKTRSPLFEMAERGVPVSERVFNENFLRPPFIQ 236
Query: 182 FISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIE 241
+ V++ +T N+P + I+PV +V ++N V+ P + G P+S + V IE
Sbjct: 237 PYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRN--VNCISYGPNSDGCNPESCNRVLIE 294
Query: 242 DCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQ 301
+C+ G D I+LKSG + G P +V I+ ++++ G V GSE+SGG N+
Sbjct: 295 NCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHG-GVVMGSEISGGARNIF 353
Query: 302 VEKIHLY--DSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA-----FGACGNCGSHPD 354
+ + + GI +T RGG I + I D E+ + A F G+ G+
Sbjct: 354 ARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEGDAGNF-- 411
Query: 355 DDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
+P + + ++ A G + AP + + L ++ +
Sbjct: 412 -------MPQVKNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFN 453
>gi|189462646|ref|ZP_03011431.1| hypothetical protein BACCOP_03343 [Bacteroides coprocola DSM 17136]
gi|189430807|gb|EDU99791.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 482
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 180/422 (42%), Gaps = 90/422 (21%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ +I +FGA D T + + + + +GG + +P G + TG + S++ L
Sbjct: 61 KAYNIKDFGATTD--TPDQPCHEQINLAITTCNQEGGGTVVIPKGTFYTGPITMKSNVNL 118
Query: 99 FLEKGAVILGSQNP--------SHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
LE+GA + S + + W+ +D + + LI Y ++ +T
Sbjct: 119 HLEEGATLKFSTDQKLYFPGVITRWEGLDCYNA------------RPLIYAYGESNIAIT 166
Query: 151 GDNGTIDGQGS--VWW-----------DWFSSQSLNYS---------------------- 175
G GTIDGQGS WW + SQ L
Sbjct: 167 GK-GTIDGQGSNETWWPMCGAAHYGWKEGMHSQKLGSRERLMGYAELKRPIYERAMTPED 225
Query: 176 --RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPD 233
RP L+ F +++ ++T LN+P + IHP+ C ++ ++ + ++ P G P+
Sbjct: 226 ALRPQLINFYLCNTILIEDVTLLNSPFWVIHPLLCESLIVRGVKIYN--RGPNGDGCDPE 283
Query: 234 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 293
S NV IE+C G D I++KSG +E G + RP+ ++ +R +++ G V GSE+
Sbjct: 284 SCKNVLIENCRFDTGDDCIAIKSGRNEDGRKWNRPSENIIVRNCEMKNGHG-GVVIGSEI 342
Query: 294 SGGISNVQVEKIHL----YDSLNGIEFRTTKGRGGYIRQIVISDAE-------LYNINVA 342
SGG N+ VE + D + I +T RGG + + + + + + IN+
Sbjct: 343 SGGYRNLYVENCVMDSPQLDRV--IRIKTNDCRGGIVENVFVRNIKVGQCHEAVLKINLL 400
Query: 343 FGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI-CLSNIS 401
+ + NC A P I +++ NIT + GI N C+ NIS
Sbjct: 401 YESKENCNR---------AFPPI----VRNVHLKNITCENSQYGIYAVGLPNKDCVYNIS 447
Query: 402 LS 403
+
Sbjct: 448 VE 449
>gi|329956837|ref|ZP_08297405.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523594|gb|EGF50686.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 439
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 154/307 (50%), Gaps = 24/307 (7%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ ++ ++GA G+G+ +++ A Q AI + GG + VP+G +L+ + L ++TL
Sbjct: 5 ETYNVKKYGAKGNGRKMDSPAIQKAI---DACHKAGGGTVIVPAGTYLSATIVLKDNVTL 61
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LEK A+ILG+ + +D +DP + G GI++ +L+ ++V + G+ GTIDG
Sbjct: 62 RLEKDALILGTTDYKAYDNLDPF-TEGLGIDVGW----ALMVAVDAKNVTLEGE-GTIDG 115
Query: 159 QGSVWWDWFSSQSLNYS------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVH 212
QGS + RP L+ ++ ENV V +T A A+ H C NV+
Sbjct: 116 QGSALKARHIKEDTRPEGQRWGLRPFLLRWVRCENVKVEGVTLKYAGAWTSHYFQCRNVN 175
Query: 213 IQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDV 272
I NI++ + + + GI D +V I +C I G DA+ K+ + G D+
Sbjct: 176 INNITIRSFGVA-HNDGINIDGCQHVRISNCDIISGDDALCFKTTSSKMG------CDDI 228
Query: 273 HIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVIS 332
I + L+S+ + + G+E G N+++ H+YD+ NG + G +R + IS
Sbjct: 229 IITNMKLKSNQ-AGIKMGTESMAGFENIKISNCHIYDTKNG-GIKLFSVDGARLRNVEIS 286
Query: 333 DAELYNI 339
D + +
Sbjct: 287 DITMEEV 293
>gi|393788323|ref|ZP_10376453.1| hypothetical protein HMPREF1068_02733 [Bacteroides nordii
CL02T12C05]
gi|392655996|gb|EIY49637.1| hypothetical protein HMPREF1068_02733 [Bacteroides nordii
CL02T12C05]
Length = 457
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 153/308 (49%), Gaps = 24/308 (7%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ ++ ++GA G+GK L++ A Q AI + GG + VP+G +L+ + L ++TL
Sbjct: 23 ETFNVKKYGARGNGKKLDSPAIQKAI---DACHKAGGGTVLVPAGTYLSATIVLKDNVTL 79
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LEK A+ILG+ + +D +DP + G GI++ +L+ ++V + G+ G+IDG
Sbjct: 80 HLEKDALILGTTDYKAYDNLDPF-TEGLGIDVGW----ALLVAVDAKNVTLEGE-GSIDG 133
Query: 159 QGSVWWDWFSSQSLNYS------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVH 212
QGS + RP L+ + E V V ++T A A+ H C NV
Sbjct: 134 QGSALKERHIKVDTRPEGKRWGLRPFLLRLVRCEGVTVRDVTLKYAGAWTSHYFQCRNVK 193
Query: 213 IQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDV 272
I N+++ + + + GI D +V I +C I G DA+ K+ + G D+
Sbjct: 194 IDNVTIRSFGVA-HNDGINIDGCQHVRISNCDIISGDDALCFKTTSSKMG------CDDI 246
Query: 273 HIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVIS 332
+ + L+S+ + + G+E G N+++ H+YD+ NG + G ++R + IS
Sbjct: 247 VVENMKLKSNQ-AGIKMGTESMAGFENIRISNCHIYDTKNG-GIKLFSVDGAHLRNVEIS 304
Query: 333 DAELYNIN 340
D + +
Sbjct: 305 DITMEEVR 312
>gi|224540752|ref|ZP_03681291.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|423224671|ref|ZP_17211139.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224517619|gb|EEF86724.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|392635111|gb|EIY29017.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 467
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 141/312 (45%), Gaps = 54/312 (17%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP G + TG L S++ +E+GAV+ S + S + + + GI+
Sbjct: 79 GGGTVVVPKGTFYTGPITLKSNVNFHVEEGAVLKFSTDQSLY--FPGVITRWEGIDCYNA 136
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGS--VWWDWFSSQSLNYS---------------- 175
R LI Y ++ +TG GTIDGQGS WW + +
Sbjct: 137 R--PLIYAYGETNIAITG-KGTIDGQGSNETWWPMCGAPRYGWKEGMVAQRNGGRERLLM 193
Query: 176 -------------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
RP L+ S V++ ++T LN+P + IHP++C ++ ++ +
Sbjct: 194 YGETSTPIYKRVMTPEDGLRPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLTVRGV 253
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
V+ P G P+S NV IE+C G D I++KSG ++ G +G P+ ++ +R
Sbjct: 254 YVYN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWGVPSENIIVRG 311
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVE--KIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
++ G V GSE+SGG N+ VE K+ D I +T+ RGG I + +
Sbjct: 312 CYMKKGHG-GVVIGSEISGGYRNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVR-- 368
Query: 335 ELYNINVAFGAC 346
NV G C
Sbjct: 369 -----NVTVGQC 375
>gi|255531611|ref|YP_003091983.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344595|gb|ACU03921.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 518
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 155/305 (50%), Gaps = 26/305 (8%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I ++GA+GDG TLNT A Q AI + GG ++ P G++L+G+ L ++T+ E
Sbjct: 29 NILKYGAIGDGTTLNTEAIQKAI---DACYQSGGGKVIFPEGRFLSGTIVLKDNITIHFE 85
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
+ AV+LGS + + +DP + G GI++ +L+ R++ + G+ GTIDGQGS
Sbjct: 86 RNAVLLGSTDLKDYRNLDPF-TEGLGIDVGW----ALLVAVDARNIGLEGE-GTIDGQGS 139
Query: 162 ------VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
+ D RP LV + + V V+ +T A A+ H N+HI+N
Sbjct: 140 AIKEKHILTDTRPEGQRWGLRPFLVRIVRCDGVTVNGVTLKYAGAWTSHYFQSKNLHIEN 199
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
+ + + + + GI D +V I++C + G DA+ K+ + ++ +
Sbjct: 200 VKIMSVGVA-HNDGIGIDGCQDVVIKNCDVVSGDDALVFKTTSSKMA------CRNIEVS 252
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIRQIVISDA 334
+ L+SS + + G+E N+++ K H+Y++ N GI+ T G +R + ISD
Sbjct: 253 GLRLKSSQ-AGIKMGTESMAAFENIKISKCHIYETRNGGIKLLTVD--GANLRNVEISDI 309
Query: 335 ELYNI 339
+ ++
Sbjct: 310 TMEDV 314
>gi|431753628|ref|ZP_19542297.1| glycosyl hydrolase [Enterococcus faecium E2620]
gi|430611661|gb|ELB48738.1| glycosyl hydrolase [Enterococcus faecium E2620]
Length = 436
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 176/383 (45%), Gaps = 49/383 (12%)
Query: 55 LNTLAF------QNAIFYLKSFADKGGAQ---LYVPSGKWLTGSFNLTSHLTLFLEKGAV 105
+N L F Q+ L+ ++G + +++P G +L G+ L L E+GAV
Sbjct: 8 INALDFKTNDIQQDDTVMLQKAINQGAKEHSPVFIPEGIYLVGALFLKDKSHLIFEEGAV 67
Query: 106 ILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD 165
+ G + +D + G+E+ + +++N + +++ G G IDGQG WW+
Sbjct: 68 LKGKTEIEAFPEIDTRVA---GVEM--KWPAAILNVLSAKHILIEG-KGIIDGQGEHWWE 121
Query: 166 --WFSSQS---------------LNYS--RPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
W Q +Y+ RP +E+VV+ +L F + +N+
Sbjct: 122 LYWGKDQKSGTRAEYDRKGLCWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWNLQIT 181
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
Y ++V ++ I + + P T GI DSS +V I +C +A G D I++KSG D G
Sbjct: 182 YSNDVLVEKIIIRHN-DGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNGARVN 240
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
R ++ + I R ++ SG V GSE+S G+S+V + I + S GI ++++ RGG I
Sbjct: 241 RKSSRIEIARCNIR--SGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVI 298
Query: 327 RQIVISDAELYNINVAFGACGNCGS--HPDDDFDPDALPAIDQITFKDIIGTNITIAGNF 384
I + + + ++ F + + + + D + +P Q ++I +
Sbjct: 299 ENIRVENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPESWQAVAEEIPESK------- 351
Query: 385 TGIQEAPFANICLSNISLSINPG 407
Q NI + N+ S++PG
Sbjct: 352 ---QMTKVRNIHVKNVQASLSPG 371
>gi|383112459|ref|ZP_09933252.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
gi|313693133|gb|EFS29968.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
Length = 454
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 41/317 (12%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
SI +GAV G+ + A AI + GG ++ +P G+WLTG +L S++ L+L
Sbjct: 47 SIVNYGAVKGGEADVSDAIAGAI---TACNQAGGGRVVIPEGEWLTGPIHLKSNVNLYLA 103
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+GAV+ + NPSH+ LP+ E + Y LI + ++V +TG G + +
Sbjct: 104 EGAVLRFTDNPSHY-----LPAVMTSWEGMECYNYSPLIYAFECKNVAITG-TGMLSPKM 157
Query: 161 SVWWDWFSSQSL---------------------------NYSRPHLVEFISSENVVVSNL 193
W WF+ N+ RPHL+ F ENV++ +
Sbjct: 158 DCWKKWFARPKAHMDALRKLYTMASKDVPVEKRQMAVGENHLRPHLIHFNRCENVLLDSF 217
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+P + IH C+ ++N+ V A + GI + + N +EDC G DA+
Sbjct: 218 KIRESPFWTIHMYMCNGGIVRNLDVKAHGHN--NDGIDLEMTRNFLVEDCTFDQGDDAVV 275
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG 313
+K+G + PT ++ IR + + + GSE+SGGI NV + S+
Sbjct: 276 IKAGRNRDAWRLNTPTENIVIRNCNILEGH-TLLGIGSEISGGIRNVYMHDCKAPQSVRR 334
Query: 314 IEF-RTTKGRGGYIRQI 329
+ F +T RG +I I
Sbjct: 335 LFFVKTNHRRGAFIENI 351
>gi|395803704|ref|ZP_10482948.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434258|gb|EJG00208.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 451
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 154/324 (47%), Gaps = 39/324 (12%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW-LTGSFNLTSHLTL 98
++I + GA GD + N AF A+ K G + VP G + + G + S++ L
Sbjct: 43 QINILKLGAKGDSVSDNKKAFDKAMALCKK---NNGGTIIVPKGIYKINGPIHFVSNVNL 99
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LEKGA I S NP D + + + G L Y LI ++ ++G+ GTIDG
Sbjct: 100 KLEKGAKIKFSDNPE--DYLPMVLTSWEGTML--YNYSPLIYANNCTNIAISGE-GTIDG 154
Query: 159 QGSVWWDWFS---------SQSLNYS---------------RPHLVEFISSENVVVSNLT 194
+G W F S+ +N++ RP +++F++ +N++V N+
Sbjct: 155 EGGKTWKTFKAKENEGKNRSRDMNHNNTPLSERKFGEGYFLRPQMIQFLNCKNILVENIR 214
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
N+P + +H + ++ I+ IS + + GI P+ + +V IE+ G D +++
Sbjct: 215 IENSPFWCLHLLKSESITIRGISYKSLNHN--NDGIDPEYAKDVLIENVTFDNGDDNVAI 272
Query: 255 KSGWDEYGIA-YGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN- 312
K+G D G A P+ ++ IR + G V GSEMS G+ NV VE L
Sbjct: 273 KAGRDHEGRANTATPSQNIIIRNCNFKGLHG--VVIGSEMSAGVQNVFVENCKTAGYLKR 330
Query: 313 GIEFRTTKGRGGYIRQIVISDAEL 336
GI +T RGGYI+ I + + +L
Sbjct: 331 GIYLKTNADRGGYIKNIFVRNIQL 354
>gi|262408407|ref|ZP_06084954.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|294646414|ref|ZP_06724057.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807852|ref|ZP_06766636.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508621|ref|ZP_08788247.1| pectate lyase [Bacteroides sp. D1]
gi|229445709|gb|EEO51500.1| pectate lyase [Bacteroides sp. D1]
gi|262353959|gb|EEZ03052.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|292638241|gb|EFF56616.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444947|gb|EFG13630.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 460
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 148/322 (45%), Gaps = 41/322 (12%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT++GA GK NT A AI ++ GG ++ VP+G WLTG + S++ L+LE+
Sbjct: 54 ITDYGAKNGGKVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
A++ + NPS D LP+ E L Y L+ + +V +TG GT+ +
Sbjct: 111 NAILNFTDNPS-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 164
Query: 162 VWWDWFSS-----QSL----------------------NYSRPHLVEFISSENVVVSNLT 194
W WF ++L N+ RPHL+ F +NV++
Sbjct: 165 TWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGFK 224
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
+P + IH C ++N+ V A + GI + S N +EDC G DA+ +
Sbjct: 225 IRESPFWTIHLYMCDGGLVRNLDVKAHGHN--NDGIDFEMSRNFLVEDCSFDQGDDAVVI 282
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
K+G ++ P ++ IR + + + GSE+SGGI N+ + +S+ +
Sbjct: 283 KAGRNQDAWRLNTPCENIVIRNCQILKGH-TLLGIGSEISGGIRNIYMHDCTAPNSVMRL 341
Query: 315 EF-RTTKGRGGYIRQIVISDAE 335
F +T RGG+I + + + +
Sbjct: 342 FFVKTNHRRGGFIENVYMKNVQ 363
>gi|407684685|ref|YP_006799859.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
gi|407246296|gb|AFT75482.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
Length = 476
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 164/360 (45%), Gaps = 48/360 (13%)
Query: 74 GGAQLYVPSGKW-LTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPG 132
GG + VP G W + G L S + L LE+GA +L S +PSH+ V + + G E+
Sbjct: 95 GGGIVVVPKGTWQVDGPIRLKSKVNLHLEEGATLLFSGDPSHYLPV--VKTRWEGTEV-- 150
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQG-SVWWDWFSSQSLN------------------ 173
Y LI + DV +TG GTIDG S + W+ Q+ +
Sbjct: 151 FTYSPLIYALNVEDVAITG-KGTIDGNAQSAFIGWYEKQNTDMHALRKMGFDGVPVEKRQ 209
Query: 174 -----YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTV 228
Y RP L++F ++ V++ + T LN+P + H VY S+ ++ + V + +
Sbjct: 210 FGEGHYLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKVESHLYN--ND 267
Query: 229 GIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 288
G+ +SS V ED G D I +KSG D G G P+TD+ R L G +
Sbjct: 268 GLDIESSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDLGGEDG--IG 325
Query: 289 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGN 348
GSEMSGGI V E L++ + F++ RGG + + I +E+ + F N
Sbjct: 326 LGSEMSGGIKRVFFENNILHEGDSAYRFKSNLDRGGRVEMVRIRGSEVASFKHLFWFQLN 385
Query: 349 CGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQ-----EAPFANICLSNISLS 403
S+ +F PA T+ DII ++T+ T ++ AP N+ +I +
Sbjct: 386 YPSNLHGNF-----PA----TYTDIIIEDLTVENVGTVLEIHAPDAAPVHNVKFKDIKIK 436
>gi|423295815|ref|ZP_17273942.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
gi|392671543|gb|EIY65015.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
Length = 454
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 144/317 (45%), Gaps = 41/317 (12%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
SI +GAV G+ + A AI + GG ++ +P G+WLTG +L S++ L+L
Sbjct: 47 SIVNYGAVKGGEADVSDAIAGAI---TACNQAGGGRVVIPEGEWLTGPIHLKSNVNLYLA 103
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+GAV+ NPSH+ LP+ E + Y LI + ++V +TG G + +
Sbjct: 104 EGAVLRFMDNPSHY-----LPAVMTSWEGMECYNYSPLIYAFECKNVAITG-TGMLSPKM 157
Query: 161 SVWWDWFSSQSL---------------------------NYSRPHLVEFISSENVVVSNL 193
+ W WF+ N+ RPHL+ F ENV++ +
Sbjct: 158 NCWKKWFARPKAHMDALRKLYTMASKDVPVEKRQMAVGENHLRPHLIHFNRCENVLLDSF 217
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+P + IH C+ ++N+ V A + GI + + N +EDC G DA+
Sbjct: 218 KIRESPFWTIHMYMCNGGIVRNLDVKAHGHN--NDGIDLEMTRNFLVEDCTFDQGDDAVV 275
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG 313
+K+G + PT ++ IR + + + GSE+SGGI NV + + S+
Sbjct: 276 IKAGRNRDAWRLNTPTENIVIRNCNILEGH-TLLGIGSEISGGIRNVYMHDCKVPQSVRR 334
Query: 314 IEF-RTTKGRGGYIRQI 329
+ F +T RG ++ I
Sbjct: 335 LFFVKTNHRRGAFVENI 351
>gi|336314135|ref|ZP_08569056.1| endopolygalacturonase [Rheinheimera sp. A13L]
gi|335881648|gb|EGM79526.1| endopolygalacturonase [Rheinheimera sp. A13L]
Length = 479
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 161/374 (43%), Gaps = 61/374 (16%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG ++ VP G W TG +L S++ L L+K AV+ +P + + + + G+EL G
Sbjct: 89 GGGRVVVPEGVWSTGPVHLKSNVNLHLQKNAVLSFVTDPQAY--LPEVFTRWEGVELMG- 145
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQ--GSVWWDW------------------------F 167
+ LI Y +++ VTG+ G ++G G WW W F
Sbjct: 146 -FSPLIYAYQQQNIAVTGE-GILEGNASGENWWPWKGVWKHTPWKLDPATDQKPGRDQLF 203
Query: 168 SSQSL-----------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
+ N RP ++ E V++ +T N+P + I+PV C +V I+ +
Sbjct: 204 AMAEAGVPVEKRYLDNNRLRPPFIQPYGCERVLIEGVTIRNSPFWLINPVLCKDVVIRGV 263
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
+ + P + G P+S V IE+C+ G D I+LKSG + G P V I+
Sbjct: 264 NCVS--FGPNSDGCDPESCQRVLIENCLFDTGDDCIALKSGRNAEGRRLATPIQQVVIQD 321
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY--DSLNGIEFRTTKGRGGYIRQIVISDA 334
L++S G V GSE+SGG + + + + G+ +T RGG I QI + D
Sbjct: 322 CLMKSGHG-GVVIGSEISGGAKQIFARRCRMSSPNLERGLRIKTNSVRGGLIEQIAVDDI 380
Query: 335 ELYNINVA-----FGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQE 389
E+ + A + G+ G+ LP + + + A G+
Sbjct: 381 EIGEVKDAIVINFYYEEGDAGNF---------LPEVKDLKISNFRVKKAQRAFEIRGLPR 431
Query: 390 APFANICLSNISLS 403
A + I +S++S
Sbjct: 432 AGISGIQMSDVSFE 445
>gi|380693882|ref|ZP_09858741.1| hypothetical protein BfaeM_07848 [Bacteroides faecis MAJ27]
Length = 454
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 146/325 (44%), Gaps = 45/325 (13%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
IT+FGAV G+ NT A AI + GG ++ VP+G WLTG + S++ L LE
Sbjct: 45 KITDFGAVPGGEVNNTQAIAAAI---DACNKAGGGRVVVPAGTWLTGPVHFKSNVNLCLE 101
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+ AV+ + NP D LP+ E L Y L+ + +V ++G GT+ +
Sbjct: 102 ENAVLSFTDNPE-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAISG-KGTLQPKM 155
Query: 161 SVWWDWFSSQS---------------------------LNYSRPHLVEFISSENVVVSNL 193
W WF + N+ RPHL+ F +NV++
Sbjct: 156 GTWKVWFKRPAPHLEALKDLYTKASTNVPVIERQMAVGENHLRPHLIHFNRCKNVMLDGF 215
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+P + IH C ++N+ V A + GI + S N +EDC G DA+
Sbjct: 216 KIRESPFWTIHLYMCDGGMVRNLDVRAHGHN--NDGIDFEMSRNFLVEDCSFDQGDDAVV 273
Query: 254 LKSGWDEYGIAYGRPTTDVHIR--RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL 311
+K+G ++ P ++ IR R+L + + GSE+SGGI N+ + +S+
Sbjct: 274 IKAGRNQDAWRLNTPCENIVIRNCRIL---KGHTLLGIGSEISGGIRNIYMHDCTAPNSV 330
Query: 312 NGIEF-RTTKGRGGYIRQIVISDAE 335
+ F +T RGG+I I + + E
Sbjct: 331 MRLFFVKTNHRRGGFIENIYMKNVE 355
>gi|440761134|ref|ZP_20940226.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425064|gb|ELP22809.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 443
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 141/297 (47%), Gaps = 20/297 (6%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+S+ +F V DG+T +T Q A + A GG +L +P+G++ +G NL S L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
E GAV++ S + + V + + + + L+ R++ ++G G IDG+G
Sbjct: 60 EAGAVLIASPRLADYQAV-------QALSCAEKSHNVLLYALGQRNITISG-TGRIDGEG 111
Query: 161 SVWW----DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
W+ D + RP ++ F E V ++ T + AP + +H V C +VHI ++
Sbjct: 112 EAWFAAERDEQGYRLPRPDRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 171
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ P T + D + V + + ++ DAI +K+ A RP + I
Sbjct: 172 TIDNAMTMPNTDALDIDGCEAVFVSNSYLSAADDAICIKT--THKPAALRRPARQIMITN 229
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD 333
LL+S S + G+E + +V V ++DS GI + GG IR+++ S+
Sbjct: 230 CLLRSYS-CAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSRD--GGAIRRLLFSN 283
>gi|334342614|ref|YP_004555218.1| glycoside hydrolase [Sphingobium chlorophenolicum L-1]
gi|334103289|gb|AEG50712.1| glycoside hydrolase family 28 [Sphingobium chlorophenolicum L-1]
Length = 482
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 147/353 (41%), Gaps = 61/353 (17%)
Query: 72 DKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELP 131
D GG ++ VP+G W +G+ +L S++ L ++ A IL S P + +V + G+EL
Sbjct: 92 DAGGGRVIVPAGTWESGAIHLKSNVNLHVQADATILFSTRPQDYPIVF---TRWEGMEL- 147
Query: 132 GRRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WWDW----------------------- 166
Y L+ + +V +TG GT+DGQ WW W
Sbjct: 148 -MNYSPLVYAHGQENVALTG-AGTLDGQAGPDNWWSWKGPWNGTVEHGWKEGMADQRPAR 205
Query: 167 ---FSSQSLN------------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNV 211
F N Y RP V+F + + V++ + +P + +HPV C NV
Sbjct: 206 ARLFQMAEANVSPEKRIFGEGDYLRPAFVQFYACDRVLIEGVKLRRSPFWQVHPVLCRNV 265
Query: 212 HIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTD 271
++ + +H P G P+S D + IE C G D I++ SG + G P +
Sbjct: 266 VVRGVDIHG--LGPNNDGCDPESVDMMLIEQCTFDTGDDCIAVNSGRNADGRRLAAPAQN 323
Query: 272 VHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL--YDSLNGIEFRTTKGRGGYIRQI 329
+ IR ++ G V GS++SGG ++ E+ + D I F+ RGG +
Sbjct: 324 IVIRDCRMKEGHG-GVVVGSQISGGARHIYAERCTMDSPDLWYAIRFKNNALRGGLLEHF 382
Query: 330 VISDAELYNINVAFGACG-NCGSHPDDDFDPDALPAIDQITFKDIIGTNITIA 381
D + ++ A C N D F P +DI+ +T+A
Sbjct: 383 YFRDLTVGQVSRAAITCDFNYEEGADGPFKP---------VLRDILVQRMTVA 426
>gi|189466414|ref|ZP_03015199.1| hypothetical protein BACINT_02789 [Bacteroides intestinalis DSM
17393]
gi|189434678|gb|EDV03663.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 467
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 140/320 (43%), Gaps = 70/320 (21%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPS--------HWDVVDPLPSYG 125
GG + VP G + TG L S++ +E+GAV+ S + S W+ +D ++
Sbjct: 79 GGGTVVVPKGTFYTGPITLKSNVNFHVEEGAVLRFSTDQSLYFPGVITRWEGIDCYNAH- 137
Query: 126 RGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS--VWWDWFSSQSLNYS-------- 175
LI Y ++ +TG GTIDGQGS WW + +
Sbjct: 138 -----------PLIYAYGETNIAITG-KGTIDGQGSNETWWPMCGAPRYGWKEGMVAQRN 185
Query: 176 ---------------------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
RP L+ S V++ ++T LN+P + IHP++C
Sbjct: 186 GGRERLLMYGETSTPIYKRVMTPEDGLRPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFC 245
Query: 209 SNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRP 268
++ ++ + V+ P G P+S NV IE+C G D I++KSG ++ G +G P
Sbjct: 246 ESLTVRGVYVYN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWGIP 303
Query: 269 TTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVE--KIHLYDSLNGIEFRTTKGRGGYI 326
+ ++ +R ++ G V GSE+SGG N+ VE K+ D I +T+ RGG I
Sbjct: 304 SENIIVRGCYMKKGHG-GVVIGSEISGGYRNLYVENCKMDSPDLDRVIRIKTSTCRGGLI 362
Query: 327 RQIVISDAELYNINVAFGAC 346
+ + NV G C
Sbjct: 363 ENVFVR-------NVTVGQC 375
>gi|237709329|ref|ZP_04539810.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229456714|gb|EEO62435.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 529
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 158/366 (43%), Gaps = 41/366 (11%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
+ + +GG + +P GKW + L S++ L L KGA I S D + + +
Sbjct: 81 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAE--DYLPAVFTRHE 138
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDG-----------------QGSVWWDWFSS 169
G+E+ G NG ++ +TG+ GTI G + V WD
Sbjct: 139 GVEIMGPAAFIYANGE--NNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDMPIE 195
Query: 170 QSL-------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
Q + + RP + I+ NV++ +T + +N+ P+YC NV I+ I+V++
Sbjct: 196 QRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNST- 254
Query: 223 ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS 282
+ P GI +S NV IE C + G D +LK+G E G+ G+PT +V IR L Q
Sbjct: 255 KVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHG 314
Query: 283 SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA 342
G + GSE +G I N+ V + GI F+T + RGG + N+ A
Sbjct: 315 HG-GITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKA 373
Query: 343 F-----GACGNCGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
F G+ G +P + P + I KD I + GI E PF
Sbjct: 374 FTWDLLGSAYYMGELAARYPARKVN-RLTPNVKNILIKDFIVESADQFFTANGIPEIPFN 432
Query: 394 NICLSN 399
+ + N
Sbjct: 433 QVVIEN 438
>gi|372221526|ref|ZP_09499947.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 487
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 191/432 (44%), Gaps = 49/432 (11%)
Query: 45 EFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGA 104
+FGA NT A Q AI S A GG + G +L+GS L ++ L L+K
Sbjct: 58 DFGAQSKVGFTNTKAIQTAI---DSCAASGGGIVKFRPGTYLSGSIFLKDNVQLHLDKEV 114
Query: 105 VILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWW 164
+LGSQN + + + G +E P +L+N ++V+++G+ GTIDGQG V+W
Sbjct: 115 TLLGSQNILDYKEIATRVA-GIEMEWPA----ALVNAIDTQNVLISGE-GTIDGQGKVFW 168
Query: 165 DWFSSQSLN--------------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSN 210
D + N RP V +S+NV+V +LT A + + +Y +
Sbjct: 169 DMYWDMRKNDYEPKGLRWIVDYDAKRPRTVLIQNSKNVIVRDLTLQRAGFWTVQILYSKH 228
Query: 211 VHIQNISV--HAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRP 268
V +++ + P T GI DSS + +++C I D LK+G D G+ RP
Sbjct: 229 VTTDGLTIRNNIGGHGPSTDGIDIDSSSYILVQNCDIDCNDDNFCLKAGRDWDGLRVNRP 288
Query: 269 TTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQ 328
T V I+ +G + GSE SGGI ++ I + G++ ++ RGG I
Sbjct: 289 TEYVVIKDCKTGKGAG-LLTVGSETSGGIRHIYANNIQGKGTDAGLKLKSATTRGGVIED 347
Query: 329 IVISDAELYNINVAFGACGNCG-----SHPDDDFDPDALPA-----IDQI-------TFK 371
I+ + ++ ++ N S +++ D +P ++ + FK
Sbjct: 348 IIFDNMKMDSVGTFLSISMNWNPTYSYSKLPKEYNIDEVPEHWKTMLNTVPEQQGIPQFK 407
Query: 372 DIIGTNITI-----AGNFTGIQEAPFANICLSNISL-SINPGSYNSWECSNIHGSSESVF 425
+I+ N+ + A + +G++ + + L ++ + + GS N + I S
Sbjct: 408 NIVLNNVLVKHANKAISVSGLEVSTINKVYLKDVQINAATAGSINHSQNWKIDNVSLRTL 467
Query: 426 PEPCPELENSSS 437
ELEN S+
Sbjct: 468 DASKVELENCSN 479
>gi|238916395|ref|YP_002929912.1| glycoside hydrolase family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
gi|238871755|gb|ACR71465.1| Glycoside Hydrolase Family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
Length = 458
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 147/340 (43%), Gaps = 69/340 (20%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
RP+ +I + + N A AI Y+ ++KGG + +P G W T + S +
Sbjct: 26 RPYCYTIED-------ASRNADAINRAINYI---SEKGGGTVVIPDGIWFTAPIEIKSDV 75
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
L +EK A++ S++ + ++ + +Y G E R KS I ++ +TG G I
Sbjct: 76 ELRIEKNAILKFSKDIDQYPLI--ITNY-EGQECI--RAKSPITAENAINIGITG-GGVI 129
Query: 157 DGQGSVW------------WD-----------------WFSSQS---------------- 171
DG G +W W+ W ++S
Sbjct: 130 DGSGDMWRPIKQFKITDRQWEALMKKSQYIIDTKGGGIWMPTESSFKGNEHNIQLDAENA 189
Query: 172 -------LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES 224
++ RP +V + +++ +TF N+PA+NIHP +C N+ ++N++V P +
Sbjct: 190 LEKASEYYDFYRPVMVSLRHCKRILLDGVTFKNSPAWNIHPFFCKNLTVRNVTVSNPYYA 249
Query: 225 PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSG 284
GI +S V I +C G DAI LKSG + P DV+I L+ G
Sbjct: 250 QNGDGIDVESCKKVHIHNCTFETGDDAICLKSGKNAVARQIEGPCEDVYIHDCLVNEGHG 309
Query: 285 SSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGG 324
V GSEMS GI NV VE + G+ ++ GRGG
Sbjct: 310 GFV-IGSEMSRGIKNVLVENCTFLGTDVGVRIKSALGRGG 348
>gi|388497356|gb|AFK36744.1| unknown [Lotus japonicus]
Length = 177
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 87/153 (56%), Gaps = 2/153 (1%)
Query: 293 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSH 352
MSGGI +V+ E I + +GI +T GRGGY + I + ++ + F GN GSH
Sbjct: 1 MSGGIQDVRAEDITAIHTESGIRIKTAVGRGGYGKDIYVQRMTMHTMKWTFWMTGNYGSH 60
Query: 353 PDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNS- 411
D ++DP+ALP I I ++D++ +T+AGN GI F IC++N+++S+ S
Sbjct: 61 ADKNYDPNALPEIKGINYRDMVADEVTMAGNLEGISNDQFTGICIANVTISMAAKSKKQP 120
Query: 412 WECSNIHGSSESVFPEPCPELENSSSNS-SSTC 443
W CS++ G + V P+PC L + ++TC
Sbjct: 121 WTCSDVEGITSGVTPKPCNLLPDQGPEKITTTC 153
>gi|150004702|ref|YP_001299446.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149933126|gb|ABR39824.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 471
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 167/401 (41%), Gaps = 45/401 (11%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT++GA GK LNT A AI GG ++ +P G+WLTG +L S++ L++E+
Sbjct: 54 ITKYGAKAGGKKLNTKAIAKAITACHLV---GGGRVVIPKGEWLTGPIHLKSNINLYMEE 110
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GAV+ + PS D LP+ E + Y LI ++ +TG G + +
Sbjct: 111 GAVLRFTDTPS-----DYLPAVMTSWEGMECYNYSPLIYASDCENIAITG-KGVLAPKMD 164
Query: 162 VWWDWFSSQSL---------------------------NYSRPHLVEFISSENVVVSNLT 194
W WF+ N RPHL+ NV++
Sbjct: 165 TWRIWFARPQAHMEALRKLYTMASTDVPVEERQMAVGENNLRPHLIHLNRCRNVLLDGFK 224
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
+P + IH C ++ + V A + GI + S N IE+C G DA+ +
Sbjct: 225 IRESPFWTIHLYMCKGGIVRGLDVKANGHN--NDGIDLEMSRNFLIENCKFDQGDDAVVI 282
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
KSG + G P ++ +R + + + GSE+SGG+ NV + + S++ +
Sbjct: 283 KSGRNRDAWRLGTPCENIVVRNCQVMEGH-TLLGIGSELSGGVRNVYMHHCDVPASVHCL 341
Query: 315 EF-RTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP---DALPAIDQITF 370
F +T + RGG + I + D + G + + + P + L I+ I
Sbjct: 342 FFIKTNRRRGGIVENIYLEDVTCKDTEYLVGLDMDI-LYQWRELVPTYEERLTRIEGIHV 400
Query: 371 KDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNS 411
KDI + G + P +I + NI + + G N
Sbjct: 401 KDIRCGSADFVYELCGDERLPPKDITIRNIVVDNSKGVPNQ 441
>gi|160892048|ref|ZP_02073051.1| hypothetical protein BACUNI_04508 [Bacteroides uniformis ATCC 8492]
gi|156858526|gb|EDO51957.1| polygalacturonase (pectinase) [Bacteroides uniformis ATCC 8492]
Length = 471
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 167/401 (41%), Gaps = 45/401 (11%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT++GA GK LNT A AI GG ++ +P G+WLTG +L S++ L++E+
Sbjct: 54 ITKYGAKAGGKKLNTKAIAKAITACHLV---GGGRVVIPKGEWLTGPIHLKSNINLYMEE 110
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GAV+ + PS D LP+ E + Y LI ++ +TG G + +
Sbjct: 111 GAVLRFTDTPS-----DYLPAVMTSWEGMECYNYSPLIYASDCENIAITG-KGVLAPKMD 164
Query: 162 VWWDWFSSQSL---------------------------NYSRPHLVEFISSENVVVSNLT 194
W WF+ N RPHL+ NV++
Sbjct: 165 TWRIWFARPQAHMEALRKLYTMASTDVPVEERQMAVGENNLRPHLIHLNRCRNVLLDGFK 224
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
+P + IH C ++ + V A + GI + S N IE+C G DA+ +
Sbjct: 225 IRESPFWTIHLYMCKGGIVRGLDVKANGHN--NDGIDLEMSRNFLIENCKFDQGDDAVVI 282
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
KSG + G P ++ +R + + + GSE+SGG+ NV + + S++ +
Sbjct: 283 KSGRNRDAWRLGTPCENIVVRNCQVMEGH-TLLGIGSELSGGVRNVYMHHCDVPASVHCL 341
Query: 315 EF-RTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP---DALPAIDQITF 370
F +T + RGG + I + D + G + + + P + L I+ I
Sbjct: 342 FFIKTNRRRGGIVENIYLEDVTCKDTEYLVGLDMDI-LYQWRELVPTYEERLTRIEGIHV 400
Query: 371 KDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNS 411
KDI + G + P +I + NI + + G N
Sbjct: 401 KDIRCGSADFVYELCGDERLPPKDITIRNIVVDNSKGVPNQ 441
>gi|295086705|emb|CBK68228.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 460
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 149/322 (46%), Gaps = 41/322 (12%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT++GA G+ NT A AI ++ GG ++ VP+G WLTG + S++ L+LE+
Sbjct: 54 ITDYGAKNGGEVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
A++ + NPS D LP+ E L Y L+ + +V +TG GT+ +
Sbjct: 111 NAILNFTDNPS-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 164
Query: 162 VWWDWFSS-----QSL----------------------NYSRPHLVEFISSENVVVSNLT 194
W WF ++L N+ RPHL+ F +NV++
Sbjct: 165 TWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGFK 224
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
+P + IH C ++N+ V A ++ GI + S N +EDC G DA+ +
Sbjct: 225 IRESPFWTIHLYMCDGGLVRNLDVKAHGDN--NDGIDFEMSRNFLVEDCSFDQGDDAVVI 282
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
K+G ++ P ++ IR + + + GSE+SGGI N+ + +S+ +
Sbjct: 283 KAGRNQDAWRLNTPCENIVIRNCQILKGH-TLLGIGSEISGGIRNIYMHDCTAPNSVMRL 341
Query: 315 EF-RTTKGRGGYIRQIVISDAE 335
F +T RGG+I + + + +
Sbjct: 342 FFVKTNHRRGGFIENVYMKNVQ 363
>gi|189464040|ref|ZP_03012825.1| hypothetical protein BACINT_00375 [Bacteroides intestinalis DSM
17393]
gi|189438613|gb|EDV07598.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 532
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 147/324 (45%), Gaps = 33/324 (10%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
VS FGAV D L+T A Q AI S A GG + + G +LTG+ + S + L +
Sbjct: 84 VSANSFGAVADSTVLSTDAIQKAI---DSCALSGGGTVTLQPGYYLTGALFVKSGVNLQI 140
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIEL--PGRRYKSLINGYMLRDVVVTGDNGTIDG 158
KG ++ S S GIE+ P ++IN V+G+ GT+D
Sbjct: 141 SKGVTLIAC---SDIHCYPEFRSRIAGIEMVWPA----AVINIIGEEKASVSGE-GTLDC 192
Query: 159 QGSVWWDWFSSQSLNYS---------------RPHLVEFISSENVVVSNLTFLNAPAYNI 203
+G ++WD + + Y R LVE +S +V +SN T + +
Sbjct: 193 RGKIFWDKYWAMRKEYEAKGLRWIVDYDCKRVRGILVE--NSSDVTLSNFTLMRTGFWGC 250
Query: 204 HPVYCSNVHIQNISVH--APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEY 261
+Y + + + ++ P T GI DSS N+ IE+C I D I LK+G D
Sbjct: 251 QILYSDHCTVDGLIINNNIGGRGPSTDGIDIDSSTNILIENCEIDCNDDNICLKAGRDAD 310
Query: 262 GIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKG 321
G+ RPT ++ IR + G + GSE SGGI NV + + + N ++ ++
Sbjct: 311 GLRVNRPTENIVIRNCTVH-KGGGLITCGSETSGGIRNVLAHDLKAFGTSNVLQLKSAMT 369
Query: 322 RGGYIRQIVISDAELYNINVAFGA 345
RGG I I I+ E N+ FGA
Sbjct: 370 RGGVIENIYITRVEAKNVRRIFGA 393
>gi|265755004|ref|ZP_06089918.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263234615|gb|EEZ20194.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 497
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 158/366 (43%), Gaps = 41/366 (11%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
+ + +GG + +P GKW + L S++ L L KGA I S D + + +
Sbjct: 49 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAE--DYLPAVFTRHE 106
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDG-----------------QGSVWWDWFSS 169
G+E+ G NG ++ +TG+ GTI G + V WD
Sbjct: 107 GVEIMGPAAFIYANGE--NNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDMPIE 163
Query: 170 QSL-------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
Q + + RP + I+ NV++ +T + +N+ P+YC NV I+ I+V++
Sbjct: 164 QRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNST- 222
Query: 223 ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS 282
+ P GI +S NV IE C + G D +LK+G E G+ G+PT +V IR L Q
Sbjct: 223 KVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHG 282
Query: 283 SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA 342
G + GSE +G I N+ V + GI F+T + RGG + N+ A
Sbjct: 283 HG-GITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKA 341
Query: 343 F-----GACGNCGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
F G+ G +P + P + I KD I + GI E PF
Sbjct: 342 FTWDLLGSAYYMGELAARYPARKVN-RLTPNVKNILIKDFIVESADQFFTANGIPEIPFN 400
Query: 394 NICLSN 399
+ + N
Sbjct: 401 QVVIEN 406
>gi|373462557|ref|ZP_09554274.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
gi|371948030|gb|EHO65924.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
Length = 853
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 156/367 (42%), Gaps = 69/367 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKS---FADKGGAQLYVPSGKWLTGSFNLTSH 95
SV IT+FGA + A QN L++ A +GG ++ VP+GKW TG+ L S
Sbjct: 42 RSVVITKFGA-----KTSASAAQNQKAILRAIAVLAKQGGGKVIVPAGKWNTGALRLQSG 96
Query: 96 LTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
+ L + K A + Q D+ + + G+ Y I Y DVVV+G+ GT
Sbjct: 97 IELVVSKDAHL---QFVFDRDLYPLVKTSWEGMMCWN--YSPCIYSYEANDVVVSGE-GT 150
Query: 156 IDGQGS--VWWDWFSSQSLNYS-------------------------------------R 176
IDG GS WW + Y R
Sbjct: 151 IDGGGSNETWWPMNGKANFGYVKGVTKEAQVLGSRARLQKMAEADMPWDERRFGKGYGLR 210
Query: 177 PHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSD 236
P L+ F+ + +S +T L +P + IHP+ C NV + + + E P G P+ +
Sbjct: 211 PQLINFVKGNRIRISGVTLLRSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEGCE 268
Query: 237 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 296
NV I++ + G D I++KSG + G + +P+ ++ IR +++ G V GSE+SGG
Sbjct: 269 NVLIQNTLFHTGDDCIAIKSGRNNDGRFWNQPSKNIIIRNCVMEDGHG-GVVIGSEISGG 327
Query: 297 ISNVQVEKIHL----YDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSH 352
N+ E + D + + +T RGG I I + V G C
Sbjct: 328 CQNIYAEDCEMDSPELDRV--LRIKTNNCRGGLIENINMR-------RVKVGQCKEAVVK 378
Query: 353 PDDDFDP 359
+ D++P
Sbjct: 379 INLDYEP 385
>gi|399087913|ref|ZP_10753337.1| endopolygalacturonase [Caulobacter sp. AP07]
gi|398031883|gb|EJL25254.1| endopolygalacturonase [Caulobacter sp. AP07]
Length = 458
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 167/412 (40%), Gaps = 73/412 (17%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
+ + GA G +T FQ AI + A GG + V G++L G L S++ L L+K
Sbjct: 40 VRDHGAGGTRIWFDTEGFQAAI---DACAKAGGGTVRVTRGEYLIGPIWLKSNIRLELQK 96
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
GA +L + +P+ + P LIN +V V G+ G IDGQG+V
Sbjct: 97 GAEVLAATDPALF---------------PQGERAGLINVKDADNVAVVGE-GLIDGQGAV 140
Query: 163 WW---------------DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
WW D + Q RP L+ S N+ + N+P++++
Sbjct: 141 WWERIRAIWRANPNFATDGQARQQQKDDRPRLILVSHSTNIRFEGVRIENSPSFHLVLND 200
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
+V I + + AP +P T I P S +V I + +I++G D +++KS +
Sbjct: 201 TDHVTIDRVRITAPAHAPNTDAIDPIDSRHVVITNNVISVGDDIVAIKSNGPD------- 253
Query: 268 PTTDVHIRRVLLQSS----SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG 323
P + +L S +G + GS SGG++ V+VE S+ G+ +T +G+G
Sbjct: 254 PRHPDAVSSDILISGNTILAGRGICIGSGTSGGVTRVRVENNSFDGSMYGLRIKTMRGKG 313
Query: 324 GYIRQIVISDAELYNINV-------------------------AFGACGNCGSHPDDDFD 358
G +R +V + + N+ F P D
Sbjct: 314 GKVRDVVFKNNRMKNVETPLVFTSYYEYRPLDLKAATALLQPGGFLLGNQIWPGPTDPAQ 373
Query: 359 P---DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPG 407
P D P + I + T +AG G+ E P A + L ++ + G
Sbjct: 374 PIAADKTPDMADIVVDGLTATGADLAGIVVGLPERPIAGLTLRDVRIEAKHG 425
>gi|168063573|ref|XP_001783745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664751|gb|EDQ51459.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 460
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 143/278 (51%), Gaps = 26/278 (9%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
+++FGA G+G+ +T A Q++I Y A++GG +YV G+ LTG+ L S++TL+++K
Sbjct: 35 VSDFGATGNGEVYDTSAIQSSIDYC---ANQGGGVVYVSPGENLTGTLYLKSNITLWVDK 91
Query: 103 GAVILGSQNP----SHWDV-VDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
GA I+GS +HW L +EL G ++ G L+ VV + I
Sbjct: 92 GATIVGSARQEDFLAHWTRWYTILAEDAENVELTG---GGIVTGQGLKFVVEFKEEKNI- 147
Query: 158 GQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAY-NIHPVYCSNVHIQNI 216
V W+ + RP LV FI+ +NV + N+ FL PAY +H V + + I ++
Sbjct: 148 ---MVSWNVTGDCVGDECRPRLVGFINCKNVHIWNV-FLREPAYWCLHIVKSNIISIHDV 203
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
S+H SP T GI DSS+N I+DC I G DAI KS E G Y T+ IR
Sbjct: 204 SMHGDFNSPNTDGIDIDSSNNTVIKDCHIDTGDDAICSKS---ELGPLYNLTVTNCWIR- 259
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
+ +V GS + + N+ E++ + DS G+
Sbjct: 260 -----TKSCAVKLGSMTNFNLGNLHFEQLVIVDSHRGL 292
>gi|304398511|ref|ZP_07380384.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304354016|gb|EFM18390.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 443
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 141/297 (47%), Gaps = 20/297 (6%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+S+ +F V DG+T +T Q A + A GG +L +P+G++ +G NL S L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
E GAV++ S + + V + + + + L+ R++ ++G G IDG+G
Sbjct: 60 EAGAVLIASPRLADYQAV-------QALSCAEKSHNVLLYALGQRNITISG-TGRIDGEG 111
Query: 161 SVWW----DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
W+ D + RP ++ F E V ++ T + AP + +H V C +VHI ++
Sbjct: 112 EAWFAAERDEQGYRLPRPDRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 171
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ P T + D + V + + ++ DAI +K+ A RP + I
Sbjct: 172 TIDNAMTMPNTDALDIDGCEAVFVSNSYLSAADDAICIKT--THKPAALRRPARQIMITN 229
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD 333
LL+S S + G+E + +V V ++DS GI + GG +R+++ S+
Sbjct: 230 CLLRSYS-CAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSRD--GGAMRRLLFSN 283
>gi|423242175|ref|ZP_17223285.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
gi|392639919|gb|EIY33727.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
Length = 919
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 158/366 (43%), Gaps = 41/366 (11%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
+ + +GG + +P GKW + L S++ L L KGA I S D + + +
Sbjct: 471 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAE--DYLPAVFTRHE 528
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDG-----------------QGSVWWDWFSS 169
G+E+ G NG ++ +TG+ GTI G + V WD
Sbjct: 529 GVEIMGPAAFIYANGE--NNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDMPIE 585
Query: 170 QSL-------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
Q + + RP + I+ NV++ +T + +N+ P+YC NV I+ I+V++
Sbjct: 586 QRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNST- 644
Query: 223 ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS 282
+ P GI +S NV IE C + G D +LK+G E G+ G+PT +V IR L Q
Sbjct: 645 KVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHG 704
Query: 283 SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA 342
G + GSE +G I N+ V + GI F+T + RGG + N+ A
Sbjct: 705 HG-GITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKA 763
Query: 343 F-----GACGNCGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
F G+ G +P + P + I KD I + GI E PF
Sbjct: 764 FTWDLLGSAYYMGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 822
Query: 394 NICLSN 399
+ + N
Sbjct: 823 QVVIEN 828
>gi|336417632|ref|ZP_08597953.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
gi|335935373|gb|EGM97327.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
Length = 454
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 142/317 (44%), Gaps = 41/317 (12%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
SI +GAV G+ + A AI + GG ++ +P G+WLTG +L S++ L+L
Sbjct: 47 SIVNYGAVKGGEADVSDAIAGAI---AACNQAGGGRVVIPEGEWLTGPIHLKSNVNLYLA 103
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+GAV+ + NPSH+ LP+ E + Y LI ++V +TG G + +
Sbjct: 104 EGAVLRFTDNPSHY-----LPAVMTSWEGMECYNYSPLIYALECKNVAITG-TGLLSPKM 157
Query: 161 SVWWDWFSSQSL---------------------------NYSRPHLVEFISSENVVVSNL 193
W WF+ N+ RPHL+ F ENV++ +
Sbjct: 158 DCWKKWFARPKAHMDALRKLYTMASKDVPVEKRQMAVGENHLRPHLIHFNRCENVLLDSF 217
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+P + IH C+ ++N+ V A + GI + + N +EDC G DA+
Sbjct: 218 KIRESPFWTIHMYMCNGGIVRNLDVKAHGHN--NDGIDLEMTRNFLVEDCTFDQGDDAVV 275
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG 313
+K+G + PT ++ IR + + + GSE+SGGI NV + S+
Sbjct: 276 IKAGRNRDAWRLNTPTENIVIRNCNILEGH-TLLGIGSEISGGIRNVYMHDCKAPQSVRR 334
Query: 314 IEF-RTTKGRGGYIRQI 329
+ F +T RG +I I
Sbjct: 335 LFFVKTNHRRGAFIENI 351
>gi|345513259|ref|ZP_08792781.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229437122|gb|EEO47199.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 919
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 158/366 (43%), Gaps = 41/366 (11%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
+ + +GG + +P GKW + L S++ L L KGA I S D + + +
Sbjct: 471 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAK--DYLPAVFTRHE 528
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDG-----------------QGSVWWDWFSS 169
G+E+ G NG ++ +TG+ GTI G + V WD
Sbjct: 529 GVEIMGPAAFIYANGE--NNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDMPIE 585
Query: 170 QSL-------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
Q + + RP + I+ NV++ +T + +N+ P+YC NV I+ I+V++
Sbjct: 586 QRIYDGMKGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNST- 644
Query: 223 ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS 282
+ P GI +S NV IE C + G D +LK+G E G+ G+PT +V IR L Q
Sbjct: 645 KVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHG 704
Query: 283 SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA 342
G + GSE +G I N+ V + GI F+T + RGG + N+ A
Sbjct: 705 HG-GITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKA 763
Query: 343 F-----GACGNCGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
F G+ G +P + P + I KD I + GI E PF
Sbjct: 764 FTWDLLGSAYYMGELAARYPARKVN-RLTPNVKNILIKDFIVESADQFFTANGIPEIPFN 822
Query: 394 NICLSN 399
+ + N
Sbjct: 823 QVVIEN 828
>gi|253688511|ref|YP_003017701.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251755089|gb|ACT13165.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 437
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 170/392 (43%), Gaps = 50/392 (12%)
Query: 49 VGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILG 108
V +G L T A Q+AI + GG ++ + +G W +G L ++ L+L G+ +
Sbjct: 29 VSEGIALATSAIQHAI---DQCSQAGGGRVELSAGVWQSGPLLLKDNVELYLAAGSRLTA 85
Query: 109 SQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV-WW--- 164
S + P + I P ++ I ++++ + G G IDGQG WW
Sbjct: 86 SYQGDAFK-----PGF---ISAPAHEGEAFILAKDVKNIAIAGP-GVIDGQGQQRWWPLA 136
Query: 165 ------------DWFSSQ------SLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPV 206
+WF+ + RP L+EF + +S + N+P +N+
Sbjct: 137 TEARNHLKHGDTNWFTQHYPGIPTANGMPRPWLIEFANVSQGKISGIGIENSPMWNLVIR 196
Query: 207 YCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYG-IAY 265
++ + N ++ P +SP T GI SS V + I+ G D IS+KSG + A
Sbjct: 197 DSHHIEVTNSTITNPSDSPNTDGIDIISSRQVHLHHLNISTGDDNISVKSGLAKRADDAE 256
Query: 266 GRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGY 325
R T HI QS +G ++ GSE GI V ++ +H + NG+ ++ + RG
Sbjct: 257 SRDITIDHI-----QSENGHGISIGSETINGIGKVTLQDLHFTGTENGVRIKSGRDRGAN 311
Query: 326 IRQIVISDAELYNIN---VAFGACGNCGSHPDDDFDP-------DALPAIDQITFKDIIG 375
I ++I + + + V + G G + D P P I +T + I
Sbjct: 312 IGPVIIRNVTMQQVKTPLVITDSYGGNGGYSSDSVSPIKYQTLTTTTPNIHDVTLQHIEA 371
Query: 376 TNITIAGNFTGIQEAPFANICLSNISLSINPG 407
+ T AG +G+ EAP NI L ++ ++ G
Sbjct: 372 SGATHAGIISGLPEAPLKNIHLESVHITAKTG 403
>gi|423232692|ref|ZP_17219092.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|423247384|ref|ZP_17228434.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
gi|392623131|gb|EIY17236.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|392632524|gb|EIY26483.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
Length = 919
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 158/366 (43%), Gaps = 41/366 (11%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
+ + +GG + +P GKW + L S++ L L KGA I S D + + +
Sbjct: 471 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAE--DYLPAVFTRHE 528
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDG-----------------QGSVWWDWFSS 169
G+E+ G NG ++ +TG+ GTI G + V WD
Sbjct: 529 GVEIMGPAAFIYANGE--NNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDMPIE 585
Query: 170 QSL-------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
Q + + RP + I+ NV++ +T + +N+ P+YC NV I+ I+V++
Sbjct: 586 QRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNST- 644
Query: 223 ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS 282
+ P GI +S NV IE C + G D +LK+G E G+ G+PT +V IR L Q
Sbjct: 645 KVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHG 704
Query: 283 SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA 342
G + GSE +G I N+ V + GI F+T + RGG + N+ A
Sbjct: 705 HG-GITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKA 763
Query: 343 F-----GACGNCGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
F G+ G +P + P + I KD I + GI E PF
Sbjct: 764 FTWDLLGSAYYMGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 822
Query: 394 NICLSN 399
+ + N
Sbjct: 823 QVVIEN 828
>gi|336414764|ref|ZP_08595108.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
gi|335942134|gb|EGN03982.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
Length = 469
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 168/402 (41%), Gaps = 82/402 (20%)
Query: 1 MKMPVALLLLLALCSAILINGEVS-DGQCDDQPTLDPRPHSVS-------ITEFGAVGDG 52
M+ + LLL+L + + V D + ++ + S IT+FGA D
Sbjct: 2 MRRTINLLLMLLFVAEVTFANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 53 KTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNP 112
+ N S + GG + VP G + TG L S++ LE+GAV+ S +
Sbjct: 62 EANPCHEAINQAILQCSLS--GGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTDQ 119
Query: 113 S--------HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV-- 162
S W+ +D ++ LI Y ++ +TG G IDGQGS+
Sbjct: 120 SLYFPAVLTRWEGIDCYNAH------------PLIYAYGESNIAITG-KGIIDGQGSMET 166
Query: 163 WWDWFSSQSLNYS-----------------------------------RPHLVEFISSEN 187
WW + + RP L+ S
Sbjct: 167 WWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHT 226
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAM 247
+++ +T LN+P + IHP++C ++ + ++V P G P+S NV IE+C
Sbjct: 227 ILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDT 284
Query: 248 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 307
G D I++KSG +E G + P+ ++ +R ++++ G V GSE+SGG N+ VE +
Sbjct: 285 GDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEISGGYRNLFVEDCRM 343
Query: 308 YDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC 346
DS N I +T+ RGG I + + NV G C
Sbjct: 344 -DSPNLDRVIRIKTSTCRGGLIENVFVR-------NVTVGQC 377
>gi|315570522|gb|ADU33265.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 409
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 177/406 (43%), Gaps = 32/406 (7%)
Query: 9 LLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLK 68
+++ L S I ++ +S QC+ + ++ EF G ++T AI +
Sbjct: 1 MMMILWSIICLSFSLSYIQCNSE--------IYNVIEFRVDPTGHIVSTKGITAAI---R 49
Query: 69 SFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGI 128
+ G ++ P G + TG L SH+TL ++ GA++L N + + V+ G I
Sbjct: 50 EASKNNGGVVHFPKGIYRTGPIQLRSHVTLQIDNGALLLFEDNQNLYPPVNVTLPSGEVI 109
Query: 129 ELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENV 188
L Y LI+ + R++ +TG G +DG G+ W S +RP + F+ S+ V
Sbjct: 110 AL---SYTPLISAFGQRNISITG-RGMLDGSGAFWIKLLPPPS---TRPFFLYFVESQEV 162
Query: 189 VVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPES----PYTVGIVPDSSDNVCIEDCI 244
++ + N+P YN+H S++ I+ I++ P + P T GI D + + +
Sbjct: 163 LLEGVHIKNSPMYNVHFKDTSHITIKGITITNPENTVDPGPNTDGINCDPCRYLHVSNVT 222
Query: 245 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 304
I+ G DAI +K+ +PT V I + + ++ GS +GG+ N+ V
Sbjct: 223 ISTGDDAIVMKADMRGRTSKQLKPTEHVLIENSFIFVGH-AGISMGSATAGGLRNITVRN 281
Query: 305 IHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP----- 359
+ GI +T + RGG + I + + NI A + + D+
Sbjct: 282 CLFNGTNRGIYIKTARDRGGKVEDIHYHNITMLNIRKEGVAIADVYNGTDEGLHERNVYP 341
Query: 360 ----DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS 401
+ P I I F+ I G + + G+ E+P NI + S
Sbjct: 342 QPVTENTPFIGNIEFQGIRGNSKLESIFIVGLPESPVVNITFKDFS 387
>gi|212693801|ref|ZP_03301929.1| hypothetical protein BACDOR_03322 [Bacteroides dorei DSM 17855]
gi|212663690|gb|EEB24264.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 919
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 158/366 (43%), Gaps = 41/366 (11%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
+ + +GG + +P GKW + L S++ L L KGA I S D + + +
Sbjct: 471 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAE--DYLPAVFTRHE 528
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDG-----------------QGSVWWDWFSS 169
G+E+ G NG ++ +TG+ GTI G + V WD
Sbjct: 529 GVEIMGPAAFIYANGE--NNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDMPIE 585
Query: 170 QSL-------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
Q + + RP + I+ NV++ +T + +N+ P+YC NV I+ I+V++
Sbjct: 586 QRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNST- 644
Query: 223 ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS 282
+ P GI +S NV IE C + G D +LK+G E G+ G+PT +V IR L Q
Sbjct: 645 KVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHG 704
Query: 283 SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA 342
G + GSE +G I N+ V + GI F+T + RGG + N+ A
Sbjct: 705 HG-GITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKA 763
Query: 343 F-----GACGNCGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
F G+ G +P + P + I KD I + GI E PF
Sbjct: 764 FTWDLLGSAYYMGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 822
Query: 394 NICLSN 399
+ + N
Sbjct: 823 QVVIEN 828
>gi|407688605|ref|YP_006803778.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291985|gb|AFT96297.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 476
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 164/360 (45%), Gaps = 48/360 (13%)
Query: 74 GGAQLYVPSGKW-LTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPG 132
GG + VP G W + G L S + L LE+GA +L S +PSH+ V + + G E+
Sbjct: 95 GGGIVVVPKGTWQVDGPIRLKSKVNLHLEEGATLLFSGDPSHYLPV--VKTRWEGTEV-- 150
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQG-SVWWDWFSSQSLN------------------ 173
Y LI + DV +TG GTIDG S + W+ Q+ +
Sbjct: 151 FTYSPLIYALNVEDVAITG-KGTIDGNAQSAFIGWYEKQNTDMHALRKMGFDGVPVEKRQ 209
Query: 174 -----YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTV 228
Y RP L++F ++ V++ + T LN+P + H VY S+ ++ + V + +
Sbjct: 210 FGEGHYLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKVESHLYN--ND 267
Query: 229 GIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 288
G+ +SS V ED G D I +KSG D G G P+TD+ R L G +
Sbjct: 268 GLDIESSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDLGGEDG--IG 325
Query: 289 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGN 348
GSEMSGGI V E L++ + F++ RGG + + I +++ + F N
Sbjct: 326 LGSEMSGGIKRVFFENNVLHEGDSAYRFKSNLDRGGRVEMVRIRGSKVASFKHLFWFQLN 385
Query: 349 CGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQ-----EAPFANICLSNISLS 403
S+ +F PA T+ DII ++T+ T ++ AP N+ +I +
Sbjct: 386 YPSNLHGNF-----PA----TYTDIIIEDLTVENVGTVLEIHAPDAAPVHNVKFKDIKIK 436
>gi|383114434|ref|ZP_09935198.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
gi|313693859|gb|EFS30694.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
Length = 469
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 168/402 (41%), Gaps = 82/402 (20%)
Query: 1 MKMPVALLLLLALCSAILINGEVS-DGQCDDQPTLDPRPHSVS-------ITEFGAVGDG 52
M+ + LLL+L + + V D + ++ + S IT+FGA D
Sbjct: 2 MRRTIYLLLILLFVAEVTYANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 53 KTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNP 112
+ N S A GG + VP G + TG L S++ LE+GAV+ S +
Sbjct: 62 EANPCHEAINQAILQCSLA--GGGTVIVPKGTFYTGPVTLKSNVNFHLEEGAVLKFSTDQ 119
Query: 113 S--------HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV-- 162
S W+ +D ++ LI Y ++ +TG G IDGQGS+
Sbjct: 120 SLYFPAVLTRWEGIDCYNAH------------PLIYAYGESNIAITG-KGIIDGQGSMET 166
Query: 163 WWDWFSSQSLNYS-----------------------------------RPHLVEFISSEN 187
WW + + RP L+ S
Sbjct: 167 WWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHT 226
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAM 247
+++ +T LN+P + IHP++C ++ + ++V P G P+S NV IE+C
Sbjct: 227 ILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDT 284
Query: 248 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 307
G D I++KSG +E G + P+ ++ +R ++++ G V GSE+SGG N+ VE +
Sbjct: 285 GDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEISGGYRNLFVEDCRM 343
Query: 308 YDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC 346
DS N I +T+ RGG I + + NV G C
Sbjct: 344 -DSPNLDRVIRIKTSTCRGGLIENVYVR-------NVTVGQC 377
>gi|427386399|ref|ZP_18882596.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
gi|425726439|gb|EKU89304.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
Length = 467
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 141/312 (45%), Gaps = 54/312 (17%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP G + TG L S++ +E+GA++ S + S + + + G++
Sbjct: 79 GGGTVIVPKGTFYTGPITLKSNVNFHVEEGAILKFSTDQSLY--FPGVITRWEGLDCYNA 136
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGS--VWWDWFSSQSLNYS---------------- 175
R LI Y ++ +TG GTIDGQGS WW + +
Sbjct: 137 R--PLIYAYGETNIAITG-KGTIDGQGSNDTWWPMCGAPRYGWKEGMVAQRNGGRERLLM 193
Query: 176 -------------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
RP L+ S V++ ++T LN+P + IHP++C ++ ++ +
Sbjct: 194 YGETSTPVYKRVMTPEDGLRPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGV 253
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
V+ P G P+S NV IE+C G D I++KSG ++ G +G P+ ++ +R
Sbjct: 254 YVYN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRG 311
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVE--KIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
++ G V GSE+SGG N+ VE K+ D I +T+ RGG I + +
Sbjct: 312 CYMKKGHG-GVVIGSEISGGYRNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVR-- 368
Query: 335 ELYNINVAFGAC 346
NV G C
Sbjct: 369 -----NVTVGQC 375
>gi|393783422|ref|ZP_10371595.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
gi|392668855|gb|EIY62348.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 150/335 (44%), Gaps = 51/335 (15%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ IT+FGA D +++ N S GG + VP G + TG L S++
Sbjct: 46 QTYHITDFGAKADNESVPCHEAINQAILQCSLT--GGGTVIVPKGTFYTGPITLKSNVNF 103
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
LE+GAV+ + S + + + G++ R LI Y ++ +TG GTIDG
Sbjct: 104 HLEEGAVLKFLTDQSLY--FPGVITRWEGLDCYNAR--PLIYAYGETNIAITG-KGTIDG 158
Query: 159 QGS--VWWDWFSSQSLNYS-----------------------------------RPHLVE 181
QGS WW + + RP L+
Sbjct: 159 QGSNDTWWPMCGAAKYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLRPQLIN 218
Query: 182 FISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIE 241
S +++ ++T LN+P + IHP++C ++ ++ +++ P G P+S NV IE
Sbjct: 219 LYSCHTILIEDVTLLNSPFWVIHPLFCESLIVRGVNIFN--RGPNGDGCDPESCKNVLIE 276
Query: 242 DCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQ 301
+C G D I++KSG + G + P+ ++ +R +++ G V GSE+SGG N+
Sbjct: 277 NCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGHG-GVVIGSEISGGYRNLF 335
Query: 302 VEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISD 333
VE + DS N I +T+ RGG I + + D
Sbjct: 336 VENCQM-DSPNLDRVIRIKTSTCRGGIIENVFVRD 369
>gi|406597664|ref|YP_006748794.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
gi|406374985|gb|AFS38240.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
Length = 476
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 164/360 (45%), Gaps = 48/360 (13%)
Query: 74 GGAQLYVPSGKW-LTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPG 132
GG + VP G W + G L S + L LE+GA +L S +PSH+ V + + G E+
Sbjct: 95 GGGIVVVPKGTWQVDGPIRLKSKVNLHLEEGATLLFSGDPSHYLPV--VKTRWEGTEV-- 150
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQG-SVWWDWFSSQSLN------------------ 173
Y LI + DV +TG GTIDG S + W+ Q+ +
Sbjct: 151 FTYSPLIYALNVEDVAITG-KGTIDGNAQSAFIGWYEKQNTDMHALRKMGFDGVPVEKRQ 209
Query: 174 -----YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTV 228
Y RP L++F ++ V++ + T LN+P + H VY S+ ++ + V + +
Sbjct: 210 FGEGHYLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKVESHLYN--ND 267
Query: 229 GIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 288
G+ +SS V ED G D I +KSG D G G P+TD+ R L G +
Sbjct: 268 GLDIESSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDLGGEDG--IG 325
Query: 289 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGN 348
GSEMSGGI V E L++ + F++ RGG + + I +++ + F N
Sbjct: 326 LGSEMSGGIKRVFFENNVLHEGDSAYRFKSNLDRGGRVEMVRIRGSKVASFKHLFWFQLN 385
Query: 349 CGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQ-----EAPFANICLSNISLS 403
S+ +F PA T+ DII ++T+ T ++ AP N+ +I +
Sbjct: 386 YPSNLHGNF-----PA----TYTDIIIEDLTVENVGTVLEIHAPDAAPVNNVKFKDIKIK 436
>gi|398798886|ref|ZP_10558183.1| endopolygalacturonase [Pantoea sp. GM01]
gi|398099709|gb|EJL89961.1| endopolygalacturonase [Pantoea sp. GM01]
Length = 442
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 169/376 (44%), Gaps = 38/376 (10%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+S+ +F V DG+TL+T FQ A+ +L A +GG L VP G++ G+ +L S++ L L
Sbjct: 3 LSLADFYPVADGETLDTSCFQRALDHL---AARGGGTLSVPPGRYHLGTLSLGSNIHLHL 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYML--RDVVVTGDNGTIDG 158
E GA +L S + Y + + + Y + R++ V+G GTIDG
Sbjct: 60 EAGATLLASAR---------VEDYQQQLAQSQAELSQHVLLYAVGQRNITVSG-KGTIDG 109
Query: 159 QGSVWWDWFSSQS----LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
G W+ Q RP ++ F E V + + + L AP + +H V C +VHI
Sbjct: 110 NGEAWFATEKDQQGYRLPRAQRPRMLVFEDCEQVTLEDFSILQAPMWTVHLVSCRHVHID 169
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
++++ P T + DS + V + + ++ DAI +K+ + R + I
Sbjct: 170 HLTIDNSMSMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTSQKPAHLR--RAARQIMI 227
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
LL+S S + G+E + +V V ++DS I + GG+ R+++ S
Sbjct: 228 SNCLLRSYS-CAFKIGTETFDDVEDVTVSGCTIFDSNRAIGVLSRD--GGHFRRLLFS-- 282
Query: 335 ELYNINVAFGACGNCGSHPDDDF-------DPDALP-AIDQITFKDIIGTNITIAGNFTG 386
NI +A C D DP P +I+Q+ F ++ G + A N
Sbjct: 283 ---NITLACRHAPPCHWGKADALFVSVRARDPAIAPGSIEQLQFSNVSGV-MEGAINLHA 338
Query: 387 IQEAPFANICLSNISL 402
+ ++ L+N+ L
Sbjct: 339 ERPGQIRDVMLANLQL 354
>gi|294776865|ref|ZP_06742328.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449341|gb|EFG17878.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 594
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 158/366 (43%), Gaps = 41/366 (11%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
+ + +GG + +P GKW + L S++ L L KGA I + D + + +
Sbjct: 146 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFAGRAE--DYLPAVFTRHE 203
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDG-----------------QGSVWWDWFSS 169
G+E+ G NG ++ +TG+ GTI G + V WD
Sbjct: 204 GVEIMGPAAFIYANGE--NNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDMPIE 260
Query: 170 QSL-------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
Q + + RP + I+ NV++ +T + +N+ P+YC NV I+ I+V++
Sbjct: 261 QRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNST- 319
Query: 223 ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS 282
+ P GI +S NV IE C + G D +LK+G E G+ G+PT +V IR L Q
Sbjct: 320 KVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHG 379
Query: 283 SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA 342
G + GSE +G I N+ V + GI F+T + RGG + N+ A
Sbjct: 380 HG-GITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKA 438
Query: 343 F-----GACGNCGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
F G+ G +P + P + I KD I + GI E PF
Sbjct: 439 FTWDLLGSAYYMGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 497
Query: 394 NICLSN 399
+ + N
Sbjct: 498 QVVVEN 503
>gi|255691972|ref|ZP_05415647.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622381|gb|EEX45252.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 453
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 142/317 (44%), Gaps = 41/317 (12%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
SI +GAV G+ + A AI + GG ++ +P G+WLTG +L S++ L+L
Sbjct: 47 SIVNYGAVKGGEADVSDAIAGAI---AACNQAGGGRVVIPEGEWLTGPIHLKSNVNLYLA 103
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+GAV+ + NPSH+ LP+ E + Y LI ++V +TG G + +
Sbjct: 104 EGAVLRFTDNPSHY-----LPAVMTSWEGMECYNYSPLIYALECKNVAITG-TGLLSPKM 157
Query: 161 SVWWDWFSSQSL---------------------------NYSRPHLVEFISSENVVVSNL 193
W WF+ N+ RPHL+ F ENV++ +
Sbjct: 158 DCWKKWFARPKAHMDALRKLYTMASKDVPVEKRQMAVGENHLRPHLIHFNRCENVLLDSF 217
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+P + IH C+ ++N+ V A + GI + + N +EDC G DA+
Sbjct: 218 KIRESPFWTIHMYMCNGGIVRNLDVKAHGHN--NDGIDLEMTRNFLVEDCTFDQGDDAVV 275
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG 313
+K+G + PT ++ IR + + + GSE+SGGI NV + S+
Sbjct: 276 IKAGRNRDAWRLNTPTENIVIRNCNILEGH-TLLGIGSEISGGIRNVYMHDCKAPQSVRR 334
Query: 314 IEF-RTTKGRGGYIRQI 329
+ F +T RG ++ I
Sbjct: 335 LFFVKTNHRRGAFVENI 351
>gi|397689076|ref|YP_006526330.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395810568|gb|AFN73317.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 469
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 174/373 (46%), Gaps = 38/373 (10%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSG-KWLTGSFNLTSHLTLFL 100
++ +FGA GDGKTL+T A QNAI K+ A+ G A++ +P G K+LTG+ L S + F+
Sbjct: 39 NVLKFGAAGDGKTLDTKAIQNAI--DKAHAEGGNAKVIIPEGYKFLTGTIVLKSGVEFFI 96
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
++GA ++ S N + D + Y G E ++G+ G I+G+
Sbjct: 97 DQGAELIISANQA--DYKNSAVFYAEGAE------GLTMSGF-----------GNIEGRA 137
Query: 161 SVWWDWFSSQSL----NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
+ + + ++ N RP + N+ + + +F AP + +H + C NV + I
Sbjct: 138 TDFMSHYEEENEWWIPNKWRPKMFILKECRNMQLKDFSFSRAPEWGVHMLGCENVLVDGI 197
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
V + P G+ PD V I++C I G DAI +K+ + YG P+TD+ +
Sbjct: 198 RVRNYLDVPNCDGVDPDHCRKVEIKNCDIVCGDDAIVVKATKQDKD--YG-PSTDIRVYD 254
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+L++ S V G+E + I NV E + S GI + G + IV S+ E
Sbjct: 255 CILETQD-SGVKIGTETTSDIKNVLFENCKIKSSCRGINIQLRD--NGIVSDIVFSNIEF 311
Query: 337 ---YNINVAFGACGNCGSHPDDDFDPDALPA-IDQITFKDIIGTNITIAGNFTGIQEAPF 392
Y+ + +G G S +PD I I K++ G + G +E+
Sbjct: 312 ISRYHSDPWWGR-GEAISFTAIPRNPDTKSGKIKNILVKNVFGKAEN-SIRINGTKESII 369
Query: 393 ANICLSNISLSIN 405
N+ L N+S+ +
Sbjct: 370 ENVKLENVSVKFD 382
>gi|373953148|ref|ZP_09613108.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373889748|gb|EHQ25645.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 542
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 192/438 (43%), Gaps = 81/438 (18%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ +I +FGAVGDG+TLNT + + + GG + +P+G WLTG L S++ L
Sbjct: 51 RTFNIKDFGAVGDGQTLNT---GAIAKAIAACSAAGGGTVLIPAGLWLTGPIELKSNINL 107
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ GA+IL S + S + V++ GRG K + G L +V +TGD G DG
Sbjct: 108 HADHGALILFSADHSLYSVMN-----GRG--------KPQLYGEKLENVAITGD-GIYDG 153
Query: 159 QGSVW------------WD---------------WFSSQ--------------------- 170
G W W+ W+ +Q
Sbjct: 154 AGDTWRPLKKTKAAPTLWNDLVKSGGVLSKDGAMWWPTQQGMEGEAYLKTLKGKKDLTEA 213
Query: 171 ----SLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPY 226
+ ++ RP +V +S+NV++ TF N+P + +P C+N+ I+N+ + +
Sbjct: 214 DYAPAKDFLRPIMVIVANSKNVLIDGPTFKNSPNFAFNPKGCTNLIIRNVKIENEYYAQN 273
Query: 227 TVGIVPDSSDNVCIEDCIIAMGHDAISLK-SGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
I + N + C + G D I +K SG + G A +V I ++ + G
Sbjct: 274 GDAIDLSTCKNAIVYHCTVHAGDDGICMKSSGSKDKGTA---ALENVIIAENIVYHAHGG 330
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNI--NVAF 343
V GS GG++N+ V ++ GI ++++GRGG + + I +++I
Sbjct: 331 FVV-GSNTDGGMNNIWVTNNTFVNTDVGIRIKSSRGRGGLVHNVFIDHIYMHDILNEAIL 389
Query: 344 GACGNCGSHPDDDFDP----DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 399
+ + P+ D P D P + ++ N +A + G+ E P + I L++
Sbjct: 390 FSTYYEDAGPEGDKGPVAVDDKTPRFEDFHISNVYCNNAKVAVSIVGLPEMPVSKIDLTD 449
Query: 400 ISLSINPGSYNSWECSNI 417
+++S ++++ E ++I
Sbjct: 450 VTISATK-AFSALEAADI 466
>gi|298383811|ref|ZP_06993372.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
gi|298263415|gb|EFI06278.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
Length = 464
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 147/324 (45%), Gaps = 45/324 (13%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
IT+FGAV G+ NT A AI + GG ++ VP+G WLTG + S++ L LE
Sbjct: 55 KITDFGAVPGGEVDNTKAIAAAI---DACNKAGGGRVVVPAGIWLTGPVHFKSNINLCLE 111
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+ AV+ + NP D LP+ E L Y L+ + +V ++G GT+ +
Sbjct: 112 ENAVLSFTDNPE-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAISG-KGTLQPKM 165
Query: 161 SVWWDWFSS-----QSL----------------------NYSRPHLVEFISSENVVVSNL 193
W WF Q+L N+ RPHL+ F +NV++
Sbjct: 166 GTWKVWFKRPAPHLQALKELYTKASTNVPVIERQMATGENHLRPHLIHFNRCKNVMLDGF 225
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+P + IH C ++N+ V A + GI + S N +EDC G DA+
Sbjct: 226 KIRESPFWTIHLYMCDGGIVRNLDVRAHGHN--NDGIDFEMSRNFLVEDCSFDQGDDAVV 283
Query: 254 LKSGWDEYGIAYGRPTTDVHIR--RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL 311
+K+G ++ P ++ IR R+L + + GSE+SGGI N+ + +S+
Sbjct: 284 IKAGRNQDAWRLNTPCENIVIRNCRIL---KGHTLLGIGSEISGGIRNIYMHDCTAPNSV 340
Query: 312 NGIEF-RTTKGRGGYIRQIVISDA 334
+ F +T RGG+I I + +
Sbjct: 341 MRLFFVKTNHRRGGFIENIYMKNV 364
>gi|329960859|ref|ZP_08299138.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328532145|gb|EGF58949.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 488
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 152/352 (43%), Gaps = 74/352 (21%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT+FGA D T ++ + + + + GG + VP G + TG L S++ +E+
Sbjct: 71 ITDFGAKPD--TPDSPCHEEINRAIVTCSLNGGGTVIVPKGTFYTGPITLKSNVNFHVEE 128
Query: 103 GAVILGSQNPS--------HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
GA + S + S W+ +D + + LI Y ++ +TG G
Sbjct: 129 GATLKFSTDQSLYFPGVITRWEGLDCYNA------------RPLIYAYGETNIAITG-KG 175
Query: 155 TIDGQGS--VWWDWFSSQSLNYS-----------------------------------RP 177
TIDGQGS WW + + RP
Sbjct: 176 TIDGQGSKETWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMKPEDGLRP 235
Query: 178 HLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDN 237
LV S V++ ++T LN+P + IHP++C ++ ++ + V P G P+S N
Sbjct: 236 QLVNLYSCNTVLIEDITLLNSPFWVIHPLFCESLTVRGVKVFN--RGPNGDGCDPESCKN 293
Query: 238 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 297
V IE+C G D I++KSG + G + P+ ++ +R +++ G V GSE+SGG
Sbjct: 294 VLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCFMKNGHG-GVVIGSEISGGY 352
Query: 298 SNVQVEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC 346
N+ VE + DS N I +T+ RGG I + + NV G C
Sbjct: 353 RNLYVENCQM-DSPNLDRVIRIKTSTCRGGIIENVFVR-------NVTVGQC 396
>gi|189466665|ref|ZP_03015450.1| hypothetical protein BACINT_03040 [Bacteroides intestinalis DSM
17393]
gi|189434929|gb|EDV03914.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 457
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 153/306 (50%), Gaps = 24/306 (7%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
+ + ++ ++GA G+GK +++ A Q AI + GG + VP+G +L+ + L ++
Sbjct: 21 QAETFNVKKYGARGNGKKMDSPAIQKAI---DACHKAGGGTVLVPAGTYLSATIVLKDNV 77
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL LEK A+ILG+ + +D +DP + G GI++ +L+ ++V + G+ G I
Sbjct: 78 TLHLEKDALILGTTDYKAYDNLDPF-TEGLGIDVGW----ALLVAVDAKNVALEGE-GAI 131
Query: 157 DGQGSVWWDWFSSQSLNYS------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSN 210
DGQGS + RP L+ ++ E V V +T A A+ H C N
Sbjct: 132 DGQGSALKERHIKVDTRPEGQRWGLRPFLLRWVRCEGVRVEGVTLKYAGAWTSHYFQCRN 191
Query: 211 VHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTT 270
V+I N+++ + + + GI D +V I +C I G DA+ K+ + G
Sbjct: 192 VNIHNVTIRSFGVA-HNDGINIDGCQHVRISNCDIVSGDDALCFKTTASKMG------CD 244
Query: 271 DVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIV 330
D+ + + L+S+ + + G+E G N+++ H+YD+ NG + G ++R +
Sbjct: 245 DIIVTDMKLKSNQ-AGIKMGTESMAGFENIKISNCHIYDTKNG-GIKLFSVDGAHLRNVE 302
Query: 331 ISDAEL 336
ISD +
Sbjct: 303 ISDITM 308
>gi|393786392|ref|ZP_10374528.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
gi|392660021|gb|EIY53638.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
Length = 477
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 147/317 (46%), Gaps = 25/317 (7%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++T++GA GD +NT A Q AI + GG + G +LTG+ + +++ +
Sbjct: 51 NVTDYGAKGDALEMNTTAIQKAI---DAAEQAGGGIVTFSPGIYLTGALFVGNNVNFNIP 107
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
KG ++GSQ+ + +D + G+E+ +L+N ++ ++GD G I+G+G
Sbjct: 108 KGTTLIGSQDIDDYKKIDTRVA---GVEM--NWPSALVNIIGKKNAAISGD-GVINGRGK 161
Query: 162 VWWDWFSSQSLNY-------------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
V+WD + S Y RP + ENV V N+ +++H +Y
Sbjct: 162 VFWDKYRSMRKEYDPKGLRWIVDYDCERPRGILIAECENVTVENIVLYQPGFWSLHILYS 221
Query: 209 SNVHIQNISVHAPPES--PYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG 266
V + I + E P T GI DSS+ + +++ I D LK+G D G+
Sbjct: 222 KYVTVDGIIISNNIEGRGPSTDGIDIDSSEYILVQNSNINCNDDNFCLKAGRDSDGLRVN 281
Query: 267 RPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
RP V IR + G GSE SGGI+N+ + + G+ F++T RGG I
Sbjct: 282 RPCRYVVIRDCIAGHGDGLFTC-GSETSGGINNIVAYNMTGMGTKYGLRFKSTCQRGGVI 340
Query: 327 RQIVISDAELYNINVAF 343
I + + E+ + F
Sbjct: 341 EDIYLCNIEMIGVRDPF 357
>gi|407700954|ref|YP_006825741.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
gi|407250101|gb|AFT79286.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
Length = 476
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 164/360 (45%), Gaps = 48/360 (13%)
Query: 74 GGAQLYVPSGKW-LTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPG 132
GG + VP G W + G L S + L LE+GA +L S +PSH+ V + + G E+
Sbjct: 95 GGGIVVVPKGTWQVDGPIRLKSKVNLHLEEGATLLFSGDPSHYLPV--VKTRWEGTEV-- 150
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQG-SVWWDWFSSQSLN------------------ 173
Y LI + DV +TG GTIDG S + W+ Q+ +
Sbjct: 151 FTYSPLIYALNVEDVAITG-KGTIDGNAQSAFIGWYEKQNTDMHALRKMGFDGVPVEKRQ 209
Query: 174 -----YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTV 228
Y RP L++F ++ V++ + T LN+P + H VY S+ ++ + V + +
Sbjct: 210 FGEGHYLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKVESHLYN--ND 267
Query: 229 GIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 288
G+ +SS V ED G D I +KSG D G G P+TD+ R L G +
Sbjct: 268 GLDIESSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDLGGEDG--IG 325
Query: 289 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGN 348
GSEMSGGI V E L + + F++ RGG + I I +++ + F N
Sbjct: 326 LGSEMSGGIKRVFFENNVLQEGDSAYRFKSNLDRGGRVEMIRIRGSKVASFKHLFWFQLN 385
Query: 349 CGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQ-----EAPFANICLSNISLS 403
S+ +F PA T+ DII ++T+ T ++ AP N+ +I++
Sbjct: 386 YPSNLHGNF-----PA----TYTDIIIEDLTVENVGTVLEIHAPDAAPVHNVKFKDITIK 436
>gi|423224357|ref|ZP_17210825.1| hypothetical protein HMPREF1062_03011 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392636018|gb|EIY29903.1| hypothetical protein HMPREF1062_03011 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 457
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 153/306 (50%), Gaps = 24/306 (7%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
+ + ++ ++GA G+GK +++ A Q AI + GG + VP+G +L+ + L ++
Sbjct: 21 QAETFNVKKYGARGNGKKMDSPAIQKAI---DACHKAGGGTVLVPAGTYLSATIVLKDNV 77
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL LEK A+ILG+ + +D +DP + G GI++ +L+ ++V + G+ G I
Sbjct: 78 TLHLEKDALILGTTDYKAYDNLDPF-TEGLGIDVGW----ALLVAVDAKNVALEGE-GAI 131
Query: 157 DGQGSVWWDWFSSQSLNYS------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSN 210
DGQGS + RP L+ ++ E V V +T A A+ H C N
Sbjct: 132 DGQGSALKERHIKVDTRPEGQRWGLRPFLLRWVRCEGVRVEGVTLKYAGAWTSHYFQCRN 191
Query: 211 VHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTT 270
V+I N+++ + + + GI D +V I +C I G DA+ K+ + G
Sbjct: 192 VNIHNVTIRSFGVA-HNDGINIDGCQHVRISNCDIVSGDDALCFKTTASKMG------CD 244
Query: 271 DVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIV 330
D+ + + L+S+ + + G+E G N+++ H+YD+ NG + G ++R +
Sbjct: 245 DIIVTDMKLKSNQ-AGIKMGTESMAGFENIKISNCHIYDTKNG-GIKLFSVDGAHLRNVE 302
Query: 331 ISDAEL 336
ISD +
Sbjct: 303 ISDITM 308
>gi|224540434|ref|ZP_03680973.1| hypothetical protein BACCELL_05347 [Bacteroides cellulosilyticus
DSM 14838]
gi|224517948|gb|EEF87053.1| hypothetical protein BACCELL_05347 [Bacteroides cellulosilyticus
DSM 14838]
Length = 457
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 153/306 (50%), Gaps = 24/306 (7%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
+ + ++ ++GA G+GK +++ A Q AI + GG + VP+G +L+ + L ++
Sbjct: 21 QAETFNVKKYGARGNGKKMDSPAIQKAI---DACHKAGGGTVLVPAGTYLSATIVLKDNV 77
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
TL LEK A+ILG+ + +D +DP + G GI++ +L+ ++V + G+ G I
Sbjct: 78 TLHLEKDALILGTTDYKAYDNLDPF-TEGLGIDVGW----ALLVAVDAKNVALEGE-GAI 131
Query: 157 DGQGSVWWDWFSSQSLNYS------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSN 210
DGQGS + RP L+ ++ E V V +T A A+ H C N
Sbjct: 132 DGQGSALKERHIKVDTRPEGQRWGLRPFLLRWVRCEGVRVEGVTLKYAGAWTSHYFQCRN 191
Query: 211 VHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTT 270
V+I N+++ + + + GI D +V I +C I G DA+ K+ + G
Sbjct: 192 VNIHNVTIRSFGVA-HNDGINIDGCQHVRISNCDIVSGDDALCFKTTASKMG------CD 244
Query: 271 DVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIV 330
D+ + + L+S+ + + G+E G N+++ H+YD+ NG + G ++R +
Sbjct: 245 DIIVTDMKLKSNQ-AGIKMGTESMAGFENIKISNCHIYDTKNG-GIKLFSVDGAHLRNVE 302
Query: 331 ISDAEL 336
ISD +
Sbjct: 303 ISDITM 308
>gi|393787524|ref|ZP_10375656.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
gi|392658759|gb|EIY52389.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 153/356 (42%), Gaps = 74/356 (20%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ +IT+FGA D +T N S A GG + VP G + TG L S++
Sbjct: 46 QTYNITDFGAKPDNETEPCHEAINQAILKCSLA--GGGTVVVPQGTFYTGPITLKSNVNF 103
Query: 99 FLEKGAVILGSQNPS--------HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVT 150
L++GA++ N S W+ +D + + LI Y ++ +T
Sbjct: 104 HLQEGAILKFLTNQSLYFPGVITRWEGLDCYNA------------RPLIYAYGETNIAIT 151
Query: 151 GDNGTIDGQGS--VWWDWFSSQSLNYS--------------------------------- 175
G GTIDGQGS WW + +
Sbjct: 152 GK-GTIDGQGSNETWWPMCGAPKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRIMTPED 210
Query: 176 --RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPD 233
RP L+ + V++ ++T LN+P + IHP++C ++ ++ +++ P G P+
Sbjct: 211 GLRPQLINLYACSTVLIEDVTLLNSPFWVIHPLFCESLIVRGVNIFN--RGPNGDGCDPE 268
Query: 234 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 293
S NV IE+C G D I++KSG + G + P+ ++ +R +++ G V GSE+
Sbjct: 269 SCKNVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGHG-GVVIGSEI 327
Query: 294 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC 346
SGG N+ VE + DS N I +T+ RGG I + + N+ G C
Sbjct: 328 SGGYRNLFVENCQM-DSPNLDRVIRIKTSTCRGGIIENVFVR-------NITVGQC 375
>gi|116619801|ref|YP_821957.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222963|gb|ABJ81672.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 528
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 184/419 (43%), Gaps = 51/419 (12%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I ++GA DG L T AF++AI K+ GG +YVP+G++++G L S+L L ++
Sbjct: 25 NIADYGARKDGSALATEAFRSAIQAAKA---AGGGTVYVPAGQYISGPIELVSNLVLHID 81
Query: 102 KGAVILGSQNPSHWDVVDPLP-SYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
GA + + P+ LP S GR + LI G L +V +TG G +
Sbjct: 82 AGATL---RFPA-----TRLPFSRGRWQGIEALTPVPLIGGRNLENVSITG-RGVLTTSQ 132
Query: 161 SVWW----------DWFS------------SQSLNYSRPHL----VEFISSENVVVSNLT 194
W DW Q + P L + + S+NV++ +
Sbjct: 133 PEWTRIMGDPGSGPDWLHLLEILELKKPIPDQEYQKAAPQLLPMFISLMESKNVLIQGIH 192
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
+ + + I VY N + + V T GI DSS NV I DC I G D I +
Sbjct: 193 IVGSAMWPIQLVYDDNAVVSGVMVETFGGHD-TGGIYVDSSRNVRISDCYIDTGDDGIVI 251
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
KSG D G RP ++ I + + G +V GSE+SG I N+ I + G+
Sbjct: 252 KSGKDADGRRVNRPAENISITNCNVHRAHG-AVVLGSEISGWIRNLVASNITCDGTQMGV 310
Query: 315 EFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQIT-FKDI 373
+T +GRGG I + + + N+ P++ P P ++ + +++I
Sbjct: 311 RIKTRRGRGGGIEDVRFDNWTMQNVARGINISSFYVMAPENKSTPPEEPVSERTSIYRNI 370
Query: 374 IGTNITIAG-----NFTGIQEAPFANICLSNI--SLSINPGSYNS--WECSNIHGSSES 423
+++TI + GI E P + +S+I + I +YN+ E N+ S+++
Sbjct: 371 AISHMTINNSRLVIDIEGIPEMPIDGLRISDIVATAQIGMKAYNTKAMELHNVQLSAKT 429
>gi|399025028|ref|ZP_10727046.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398079129|gb|EJL70001.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 337
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 143/318 (44%), Gaps = 77/318 (24%)
Query: 10 LLALCSAILINGEVSDGQCDDQPTLDPR----------PHSVSITEFGAVGDGKTLNTLA 59
++ L +A++ +G + D ++ + ++VSI ++G V G NT A
Sbjct: 7 IIGLAAAMIFSGRIQAQNLDIYKNIEFKMPQVAETSFAANTVSIIQYGGVAGGSVKNTEA 66
Query: 60 FQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVD 119
F+ AI + KGG +L VP G WLTG L S++ L +E+GA I+ S++ + + +VD
Sbjct: 67 FRKAI---DDLSKKGGGKLVVPRGMWLTGPIELKSNINLHVEEGAFIIFSKDKNDYPLVD 123
Query: 120 PLPSYGRGIELPGR---RYKSLINGYMLRDVVVTGDNGTIDGQGSVW------------W 164
+ G R +S ++ ++ +TG G IDG G W W
Sbjct: 124 --------VSFEGLNTIRCQSPVSARNATNIAITG-KGVIDGSGDAWRAIKKGKVSESEW 174
Query: 165 D---------------WFSSQSL-------------------------NYSRPHLVEFIS 184
W+ S+S ++ RP +V +
Sbjct: 175 KEITASGGILSSDGKTWYPSESYKKGFESSSSFNVPDRISKEELKSVKDFLRPVMVSLVG 234
Query: 185 SENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCI 244
+ V++ TF N+PA+N+HP+ CSNV ++N++V P S G+ +S NV I +
Sbjct: 235 CDKVLLDGPTFQNSPAWNLHPLMCSNVILKNLTVRNPWFSQNGDGVDLESCKNVLIYNNT 294
Query: 245 IAMGHDAISLKSGWDEYG 262
+G DAI +KSG +E G
Sbjct: 295 FDVGDDAICIKSGKNEDG 312
>gi|329954471|ref|ZP_08295562.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328527439|gb|EGF54436.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 467
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 139/312 (44%), Gaps = 54/312 (17%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGR 133
GG + VP G + TG L S++ +E+GAV+ S + S + + + G++
Sbjct: 79 GGGTVVVPKGTFHTGPVTLKSNVNFHVEEGAVLKFSTDQSLY--FPAVITRWEGLDCYNA 136
Query: 134 RYKSLINGYMLRDVVVTGDNGTIDGQGS--VWWDWFSSQSLNYS---------------- 175
R LI Y ++ +TG GTIDGQGS WW + +
Sbjct: 137 R--PLIYAYGETNIAITG-KGTIDGQGSNETWWSMCGAPRYGWKEGMVAQRNGGRERLLM 193
Query: 176 -------------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
RP L+ S V++ ++T LN+P + IHP++C ++ ++
Sbjct: 194 YGETSTPIYKRIMKPEDGMRPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVR-- 251
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
VH P G P+S NV IE+C G D I++KSG ++ G + P+ ++ +R
Sbjct: 252 GVHVFNRGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRS 311
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY--DSLNGIEFRTTKGRGGYIRQIVISDA 334
+++ G V GSE+SGG N+ VE + D I +T+ RGG I + +
Sbjct: 312 CFMKNGHG-GVVIGSEISGGYRNLFVENCRMDSPDLDRVIRIKTSTCRGGLIENVFVR-- 368
Query: 335 ELYNINVAFGAC 346
NV G C
Sbjct: 369 -----NVTVGQC 375
>gi|29349563|ref|NP_813066.1| hypothetical protein BT_4155 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341473|gb|AAO79260.1| pectate lyase [Bacteroides thetaiotaomicron VPI-5482]
Length = 448
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 147/324 (45%), Gaps = 45/324 (13%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
IT+FGAV G+ NT A AI + GG ++ VP+G WLTG + S++ L LE
Sbjct: 42 KITDFGAVPGGEVDNTKAIAAAI---DACNKAGGGRVVVPAGIWLTGPVHFKSNINLCLE 98
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+ AV+ + NP D LP+ E L Y L+ + +V ++G GT+ +
Sbjct: 99 EDAVLSFTDNPE-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAISG-KGTLQPKM 152
Query: 161 SVWWDWFSS-----QSL----------------------NYSRPHLVEFISSENVVVSNL 193
W WF Q+L N+ RPHL+ F +NV++
Sbjct: 153 GTWKVWFKRPAPHLQALKELYTKASTNVPVIERQMAIGENHLRPHLIHFNRCKNVMLDGF 212
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+P + IH C ++N+ V A + GI + S N +EDC G DA+
Sbjct: 213 KIRESPFWTIHLYMCDGGIVRNLDVRAHGHN--NDGIDFEMSRNFLVEDCSFDQGDDAVV 270
Query: 254 LKSGWDEYGIAYGRPTTDVHIR--RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSL 311
+K+G ++ P ++ IR R+L + + GSE+SGGI N+ + +S+
Sbjct: 271 IKAGRNQDAWRLNTPCENIVIRNCRIL---KGHTLLGIGSEISGGIRNIYMHDCTAPNSV 327
Query: 312 NGIEF-RTTKGRGGYIRQIVISDA 334
+ F +T RGG+I I + +
Sbjct: 328 MRLFFVKTNHRRGGFIENIYMKNV 351
>gi|423312679|ref|ZP_17290616.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
gi|392687413|gb|EIY80706.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
Length = 594
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 158/366 (43%), Gaps = 41/366 (11%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
+ + +GG + +P GKW + L S++ L L KGA I S D + + +
Sbjct: 146 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSG--CAEDYLPAVFTRHE 203
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDG-----------------QGSVWWDWFSS 169
G+E+ G NG ++ +TG+ GTI G + V WD
Sbjct: 204 GVEIMGPAAFIYANGE--NNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDMPIE 260
Query: 170 QSL-------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
Q + + RP + I+ N+++ +T + +N+ P+YC NV I+ I+V++
Sbjct: 261 QRIYDGMEGRTFYRPKTISPINCTNILIEGITMERSTLWNVVPIYCENVIIRGITVNST- 319
Query: 223 ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS 282
+ P GI +S NV IE C + G D +LK+G E G+ G+PT +V IR L Q
Sbjct: 320 KVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHG 379
Query: 283 SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA 342
G + GSE +G I N+ V + GI F+T + RGG + N+ A
Sbjct: 380 HG-GITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKA 438
Query: 343 F-----GACGNCGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
F G+ G +P + P + I KD I + GI E PF
Sbjct: 439 FTWDLLGSAYYMGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 497
Query: 394 NICLSN 399
+ + N
Sbjct: 498 QVVVEN 503
>gi|325106323|ref|YP_004275977.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975171|gb|ADY54155.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 523
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 155/305 (50%), Gaps = 26/305 (8%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
+I +FGAVGDG TLNTL Q AI + GG ++ P+G++L+G+ L ++TL E
Sbjct: 26 NIKDFGAVGDGITLNTLFIQKAI---DKCNNDGGGKVIFPAGRFLSGTVELKDNVTLHFE 82
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
K A ++GS + + +DP + G GI++ +L+ +++ + G+ G IDGQG+
Sbjct: 83 KNAELVGSTDLKDYRNLDPF-TEGLGIDVGW----ALLVAVDAKNIGLEGE-GVIDGQGT 136
Query: 162 ------VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQN 215
+ D RP L+ + NV V ++T A A+ H ++I+N
Sbjct: 137 ALKEKHILTDTRPEGKRWGLRPFLLRIVRCTNVNVKDVTLKYAGAWTSHYFQSRKINIEN 196
Query: 216 ISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 275
+++ + + + GI D V I+ C + G DA+ K+ + G D+ +
Sbjct: 197 VTIRSIGVA-HNDGIGIDGCQEVRIKGCDVVSGDDALVFKTTSSKMG------CKDIVVS 249
Query: 276 RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIRQIVISDA 334
+ L+S+ G ++ FG+E N+++ ++YD+ N GI+ T G +IR + ISD
Sbjct: 250 DMKLKSNQG-AIKFGTESMAPFENIKISNCYIYDTKNGGIKLLTVD--GAHIRNVEISDI 306
Query: 335 ELYNI 339
+ N+
Sbjct: 307 VMKNV 311
>gi|423294951|ref|ZP_17273078.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
gi|392674531|gb|EIY67977.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
Length = 469
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 168/402 (41%), Gaps = 82/402 (20%)
Query: 1 MKMPVALLLLLALCSAILINGEVS-DGQCDDQPTLDPRPHSVS-------ITEFGAVGDG 52
M+ + LLL+L + + V D + ++ + S IT+FGA D
Sbjct: 2 MRRTINLLLMLLFVAEVTFANTVDFDKVFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 53 KTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNP 112
+ N S + GG + VP G + TG L S++ LE+GAV+ S +
Sbjct: 62 EANPCHEAINQAILQCSLS--GGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTDQ 119
Query: 113 S--------HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV-- 162
S W+ +D ++ LI Y ++ +TG G IDGQGS+
Sbjct: 120 SLYFPAVLTRWEGIDCYNAH------------PLIYAYGESNIAITG-KGIIDGQGSMET 166
Query: 163 WWDWFSSQSLNYS-----------------------------------RPHLVEFISSEN 187
WW + + RP L+ S
Sbjct: 167 WWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHT 226
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAM 247
+++ +T LN+P + IHP++C ++ + ++V P G P+S NV IE+C
Sbjct: 227 ILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDT 284
Query: 248 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 307
G D I++KSG +E G + P+ ++ +R ++++ G V GSE+SGG N+ VE +
Sbjct: 285 GDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEISGGYRNLFVEDCRM 343
Query: 308 YDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC 346
DS N I +T+ RGG I + Y NV G C
Sbjct: 344 -DSPNLDRVIRIKTSTCRGGLIENV-------YVRNVTVGQC 377
>gi|299148506|ref|ZP_07041568.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|423288903|ref|ZP_17267754.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
gi|298513267|gb|EFI37154.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|392668993|gb|EIY62485.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
Length = 469
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 168/402 (41%), Gaps = 82/402 (20%)
Query: 1 MKMPVALLLLLALCSAILINGEVS-DGQCDDQPTLDPRPHSVS-------ITEFGAVGDG 52
M+ + LLL+L + + V D + ++ + S IT+FGA D
Sbjct: 2 MRRTINLLLMLLFVAEVTSANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 53 KTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNP 112
+ N S + GG + VP G + TG L S++ LE+GAV+ S +
Sbjct: 62 EANPCHEAINQAILQCSLS--GGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTDQ 119
Query: 113 S--------HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV-- 162
S W+ +D ++ LI Y ++ +TG G IDGQGS+
Sbjct: 120 SLYFPAVLTRWEGIDCYNAH------------PLIYAYGESNIAITG-KGIIDGQGSMET 166
Query: 163 WWDWFSSQSLNYS-----------------------------------RPHLVEFISSEN 187
WW + + RP L+ S
Sbjct: 167 WWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHT 226
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAM 247
+++ +T LN+P + IHP++C ++ + ++V P G P+S NV IE+C
Sbjct: 227 ILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDT 284
Query: 248 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 307
G D I++KSG +E G + P+ ++ +R ++++ G V GSE+SGG N+ VE +
Sbjct: 285 GDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEISGGYRNLFVEDCRM 343
Query: 308 YDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC 346
DS N I +T+ RGG I + + NV G C
Sbjct: 344 -DSPNLDRVIRIKTSTCRGGLIENVFVR-------NVTVGQC 377
>gi|160887001|ref|ZP_02068004.1| hypothetical protein BACOVA_05015 [Bacteroides ovatus ATCC 8483]
gi|293369359|ref|ZP_06615944.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|156107412|gb|EDO09157.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|292635526|gb|EFF54033.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 469
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 168/402 (41%), Gaps = 82/402 (20%)
Query: 1 MKMPVALLLLLALCSAILINGEVS-DGQCDDQPTLDPRPHSVS-------ITEFGAVGDG 52
M+ + LLL+L + + V D + ++ + S IT+FGA D
Sbjct: 2 MRRTINLLLMLLFVAEVTSANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 53 KTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNP 112
+ N S + GG + VP G + TG L S++ LE+GAV+ S +
Sbjct: 62 EANPCHEAINQAILQCSLS--GGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTDQ 119
Query: 113 S--------HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV-- 162
S W+ +D ++ LI Y ++ +TG G IDGQGS+
Sbjct: 120 SLYFPAVLTRWEGIDCYNAH------------PLIYAYGESNIAITG-KGIIDGQGSMET 166
Query: 163 WWDWFSSQSLNYS-----------------------------------RPHLVEFISSEN 187
WW + + RP L+ S
Sbjct: 167 WWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMRPEDGMRPQLLNLHSCHT 226
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAM 247
+++ +T LN+P + IHP++C ++ + ++V P G P+S NV IE+C
Sbjct: 227 ILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDT 284
Query: 248 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 307
G D I++KSG +E G + P+ ++ +R ++++ G V GSE+SGG N+ VE +
Sbjct: 285 GDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMKNGHG-GVVIGSEISGGYRNLFVEDCRM 343
Query: 308 YDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC 346
DS N I +T+ RGG I + Y NV G C
Sbjct: 344 -DSPNLDRVIRIKTSTCRGGLIENV-------YVRNVTVGQC 377
>gi|260642167|ref|ZP_05414737.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260623411|gb|EEX46282.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 469
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 168/402 (41%), Gaps = 82/402 (20%)
Query: 1 MKMPVALLLLLALCSAILINGEVS-DGQCDDQPTLDPRPHSVS-------ITEFGAVGDG 52
M+ + LLL+L + + V D + ++ + S IT+FGA D
Sbjct: 2 MRRTINLLLMLLFVAEVTSANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 53 KTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNP 112
+ N S + GG + VP G + TG L S++ LE+GAV+ S +
Sbjct: 62 EANPCHEAINQAILQCSLS--GGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTDQ 119
Query: 113 S--------HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV-- 162
S W+ +D ++ LI Y ++ +TG G IDGQGS+
Sbjct: 120 SLYFPAVLTRWEGIDCYNAH------------PLIYAYGESNIAITG-KGIIDGQGSMET 166
Query: 163 WWDWFSSQSLNYS-----------------------------------RPHLVEFISSEN 187
WW + + RP L+ S
Sbjct: 167 WWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHT 226
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAM 247
+++ +T LN+P + IHP++C ++ + ++V P G P+S NV IE+C
Sbjct: 227 ILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDT 284
Query: 248 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 307
G D I++KSG +E G + P+ ++ +R ++++ G V GSE+SGG N+ VE +
Sbjct: 285 GDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEISGGYRNLFVEDCRM 343
Query: 308 YDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC 346
DS N I +T+ RGG I + Y NV G C
Sbjct: 344 -DSPNLDRVIRIKTSTCRGGLIENV-------YVRNVTVGQC 377
>gi|150004323|ref|YP_001299067.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149932747|gb|ABR39445.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 594
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 158/366 (43%), Gaps = 41/366 (11%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
+ + +GG + +P GKW + L S++ L L KGA + S D + + +
Sbjct: 146 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAELEFSG--CAEDYLPAVFTRHE 203
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDG-----------------QGSVWWDWFSS 169
G+E+ G NG ++ +TG+ GTI G + V WD
Sbjct: 204 GVEIMGPAAFIYANGE--NNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDMPIE 260
Query: 170 QSL-------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
Q + + RP + I+ NV++ +T + +N+ P+YC NV I+ I+V++
Sbjct: 261 QRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNST- 319
Query: 223 ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS 282
+ P GI +S NV IE C + G D +LK+G E G+ G+PT +V IR L Q
Sbjct: 320 KVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHG 379
Query: 283 SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA 342
G + GSE +G I N+ V + GI F+T + RGG + N+ A
Sbjct: 380 HG-GITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKA 438
Query: 343 F-----GACGNCGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
F G+ G +P + P + I KD I + GI E PF
Sbjct: 439 FTWDLLGSAYYMGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 497
Query: 394 NICLSN 399
+ + N
Sbjct: 498 QVVVEN 503
>gi|319644236|ref|ZP_07998749.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345519913|ref|ZP_08799321.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836217|gb|EET16526.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317384227|gb|EFV65199.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 468
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 157/359 (43%), Gaps = 67/359 (18%)
Query: 27 QCDDQPTLDPRPHSV-SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW 85
Q + Q P V +I +FGA +G L + + + + GG + VP G++
Sbjct: 32 QIEKQIKKTSFPDRVYNIKDFGA-KEGNNGEILCHEAINLAILTCSQTGGGTVLVPPGEF 90
Query: 86 LTGSFNLTSHLTLFLEKGAVILGSQNP--------SHWDVVDPLPSYGRGIELPGRRYKS 137
LTG L S++ L LE+GA + S + W+ VD +
Sbjct: 91 LTGPITLKSNVNLHLEEGAYLKFSSEKYLYTPTVLTRWEGVDCYNLH------------P 138
Query: 138 LINGYMLRDVVVTGDNGTIDGQGSV--WWD--------WFSSQS----------LNYS-- 175
LI Y ++ +TG G IDGQ S WW W + L Y+
Sbjct: 139 LIYAYGESNIGITGK-GIIDGQASNDNWWSMCGAPHYGWKEGMTAQKNGGRDKLLMYAET 197
Query: 176 ---------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
RP L+ +++ N+T N+P + IHP++C ++ ++ + V +
Sbjct: 198 FAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSS 257
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
P + G P+SS NV IE+CI G D I++KSG + G + P+ ++ +R ++
Sbjct: 258 --HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMK 315
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAEL 336
G V GSE+SGG N+ VE + DS N I +T RGG I I + + E+
Sbjct: 316 DGHG-GVVVGSEISGGYKNLFVENCKM-DSPNLERVIRIKTNNCRGGVIENIYVRNVEV 372
>gi|336404054|ref|ZP_08584754.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
gi|335943751|gb|EGN05584.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
Length = 460
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 148/322 (45%), Gaps = 41/322 (12%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT++GA G+ NT A AI ++ GG ++ VP+G WLTG + S++ L+LE+
Sbjct: 54 ITDYGAKNGGEVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
A++ + NPS D LP+ E L Y L+ + +V + G GT+ +
Sbjct: 111 NAILNFTDNPS-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAIIG-KGTLQPKMD 164
Query: 162 VWWDWFSS-----QSL----------------------NYSRPHLVEFISSENVVVSNLT 194
W WF ++L N+ RPHL+ F +NV++
Sbjct: 165 TWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGFK 224
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
+P + IH C ++N+ V A ++ GI + S N +EDC G DA+ +
Sbjct: 225 IRESPFWTIHLYMCDGGLVRNLDVKAHGDN--NDGIDFEMSRNFLVEDCSFDQGDDAVVI 282
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
K+G ++ P ++ IR + + + GSE+SGGI N+ + +S+ +
Sbjct: 283 KAGRNQDAWRLNTPCENIVIRNCQILKGH-TLLGIGSEISGGIRNIYMHDCTAPNSVMRL 341
Query: 315 EF-RTTKGRGGYIRQIVISDAE 335
F +T RGG+I + + + +
Sbjct: 342 FFVKTNHRRGGFIENVYMKNVQ 363
>gi|167763470|ref|ZP_02435597.1| hypothetical protein BACSTE_01844 [Bacteroides stercoris ATCC
43183]
gi|167698764|gb|EDS15343.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 467
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 152/343 (44%), Gaps = 56/343 (16%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT+FGA D T + + + + + GG + VP G + TG L S++ +E+
Sbjct: 50 ITDFGAQPD--TPDEPCHEAINRAILTCSLNGGGTVVVPKGTFHTGPITLKSNVNFHVEE 107
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS- 161
GAV+ S + S + + + G++ R LI Y ++ +TG GTIDGQGS
Sbjct: 108 GAVLKFSTDQSLY--FPAVITRWEGLDCYNAR--PLIYAYGETNIAITG-KGTIDGQGSN 162
Query: 162 -VWWDWFSSQSLNYS-----------------------------------RPHLVEFISS 185
WW + + RP L+ S
Sbjct: 163 ETWWPMCGASRYGWKEGMVAQRNGGRERLLMYGETSTPVYKRIMKPEDGMRPQLINLYSC 222
Query: 186 ENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCII 245
V++ ++T LN+P + IHP++C ++ ++ VH P G P+S NV IE+C
Sbjct: 223 NTVLIEDVTLLNSPFWVIHPLFCESLIVR--GVHVFNRGPNGDGCDPESCKNVLIENCTF 280
Query: 246 AMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKI 305
G D I++KSG ++ G + P+ ++ +R +++ G V GSE+SGG N+ VE
Sbjct: 281 DTGDDCIAIKSGRNQDGRKWNIPSENIIVRGCFMKNGHG-GVVIGSEISGGYRNLFVENC 339
Query: 306 HLY--DSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC 346
+ D I +T+ RGG I + + NV G C
Sbjct: 340 RMDSPDLDRVIRIKTSTCRGGLIENVFVR-------NVTVGQC 375
>gi|423312702|ref|ZP_17290639.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
gi|392687436|gb|EIY80729.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
Length = 468
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 157/359 (43%), Gaps = 67/359 (18%)
Query: 27 QCDDQPTLDPRPHSV-SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW 85
Q + Q P V +I +FGA +G L + + + + GG + VP G++
Sbjct: 32 QIEKQIKKTSFPDRVYNIKDFGA-KEGNNGEILCHEAINLAILTCSQTGGGTVLVPPGEF 90
Query: 86 LTGSFNLTSHLTLFLEKGAVILGSQNP--------SHWDVVDPLPSYGRGIELPGRRYKS 137
LTG L S++ L LE+GA + S + W+ VD +
Sbjct: 91 LTGPITLKSNVNLHLEEGAYLKFSSEKYLYTPTVLTRWEGVDCYNLH------------P 138
Query: 138 LINGYMLRDVVVTGDNGTIDGQGSV--WWD--------WFSSQS----------LNYS-- 175
LI Y ++ +TG G IDGQ S WW W + L Y+
Sbjct: 139 LIYAYGESNIGITGK-GIIDGQASNDNWWSMCGAPHYGWKEGMTAQKNGGRDKLLMYAET 197
Query: 176 ---------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
RP L+ +++ N+T N+P + IHP++C ++ ++ + V +
Sbjct: 198 FAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSS 257
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
P + G P+SS NV IE+CI G D I++KSG + G + P+ ++ +R ++
Sbjct: 258 --HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMK 315
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAEL 336
G V GSE+SGG N+ VE + DS N I +T RGG I I + + E+
Sbjct: 316 DGHG-GVVVGSEISGGYKNLFVENCKM-DSPNLERVIRIKTNNCRGGVIENIYVRNVEV 372
>gi|150004301|ref|YP_001299045.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|294776888|ref|ZP_06742351.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149932725|gb|ABR39423.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
gi|294449364|gb|EFG17901.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 468
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 157/359 (43%), Gaps = 67/359 (18%)
Query: 27 QCDDQPTLDPRPHSV-SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW 85
Q + Q P V +I +FGA +G L + + + + GG + VP G++
Sbjct: 32 QIEKQIKKTSFPDRVYNIKDFGA-KEGNNGEILCHEAINLAILTCSQTGGGTVLVPPGEF 90
Query: 86 LTGSFNLTSHLTLFLEKGAVILGSQNP--------SHWDVVDPLPSYGRGIELPGRRYKS 137
LTG L S++ L LE+GA + S + W+ VD +
Sbjct: 91 LTGPITLKSNVNLHLEEGAYLKFSSEKYLYTPTVLTRWEGVDCYNLH------------P 138
Query: 138 LINGYMLRDVVVTGDNGTIDGQGSV--WWD--------WFSSQS----------LNYS-- 175
LI Y ++ +TG G IDGQ S WW W + L Y+
Sbjct: 139 LIYAYGESNIGITGK-GIIDGQASNDNWWSMCGAPHYGWKEGMTAQKNGGRDKLLMYAET 197
Query: 176 ---------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
RP L+ +++ N+T N+P + IHP++C ++ ++ + V +
Sbjct: 198 FAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSS 257
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
P + G P+SS NV IE+CI G D I++KSG + G + P+ ++ +R ++
Sbjct: 258 --HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMK 315
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAEL 336
G V GSE+SGG N+ VE + DS N I +T RGG I I + + E+
Sbjct: 316 DGHG-GVVVGSEISGGYKNLFVENCKM-DSPNLERVIRIKTNNCRGGVIENIYVRNVEV 372
>gi|378582005|ref|ZP_09830645.1| putative polygalacturonase protein [Pantoea stewartii subsp.
stewartii DC283]
gi|377815320|gb|EHT98435.1| putative polygalacturonase protein [Pantoea stewartii subsp.
stewartii DC283]
Length = 443
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 166/371 (44%), Gaps = 28/371 (7%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+S+ +F DG+T +T A Q AI A+ GG +L +P ++ +GS NL S+ L L
Sbjct: 3 LSLADFHPAADGETPDTQALQRAI---DQIAEAGGGRLTLPPVRYRSGSLNLPSNFELHL 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
GAV++ S++ + + L S + + L+ R++ ++G G I+G
Sbjct: 60 AAGAVLIASRHLADYQQWKTLSSAEKS-------HNVLLYALGQRNLTISG-KGRIEGDA 111
Query: 161 SVWW----DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNI 216
W+ D + RP ++ F E V + + T AP + +H V C +VHI ++
Sbjct: 112 EAWFAVEADEQGYRMPRADRPRMIVFEDCEQVTLKDFTLFQAPMWTVHLVSCRHVHIDHL 171
Query: 217 SVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRR 276
++ P T + DS + V I + + DAI +K+ + RP + I
Sbjct: 172 TIDNAMTLPNTDALDIDSCEAVLISNSYFSAADDAICIKTTLKPGSLR--RPARRIAISN 229
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
LL+S S ++ G+E + ++ V ++DS GI + GG IR+++ S
Sbjct: 230 CLLRSDS-CAIKIGTETWDDVEDITVTGCSIFDSNRGIGIVSRD--GGAIRRVLFSHITF 286
Query: 337 YNINVAFGACGNCGSHP----DDDFDPDALPAI-DQITFKDIIGTNITIAGNFTGIQEAP 391
+ +VA AC + P DP P I +Q+ F + G A N Q
Sbjct: 287 HCHHVA--ACHWGKADPLFISVRTRDPQVPPGIVEQVQFSHLSGV-AEGAINLHAAQPGW 343
Query: 392 FANICLSNISL 402
+I +S + L
Sbjct: 344 IRDIVISQLQL 354
>gi|336406856|ref|ZP_08587502.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
gi|335948529|gb|EGN10233.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
Length = 469
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 168/402 (41%), Gaps = 82/402 (20%)
Query: 1 MKMPVALLLLLALCSAILINGEVS-DGQCDDQPTLDPRPHSVS-------ITEFGAVGDG 52
M+ + LLL+L + + V D + ++ + S IT+FGA D
Sbjct: 2 MRRTINLLLMLLFVAEVTSANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 53 KTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNP 112
+ N S + GG + VP G + TG L S++ LE+GAV+ S +
Sbjct: 62 EANPCHEAINQAILQCSLS--GGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTDQ 119
Query: 113 S--------HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV-- 162
S W+ +D ++ LI Y ++ +TG G IDGQGS+
Sbjct: 120 SLYFPAVLTRWEGIDCYNAH------------PLIYAYGESNIAITG-KGIIDGQGSMET 166
Query: 163 WWDWFSSQSLNYS-----------------------------------RPHLVEFISSEN 187
WW + + RP L+ S
Sbjct: 167 WWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETLTPVYKRLMKPEDGMRPQLLNLHSCHT 226
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAM 247
+++ +T LN+P + IHP++C ++ + ++V P G P+S NV IE+C
Sbjct: 227 ILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDT 284
Query: 248 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 307
G D I++KSG +E G + P+ ++ +R ++++ G V GSE+SGG N+ VE +
Sbjct: 285 GDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEISGGYRNLFVEDCRM 343
Query: 308 YDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC 346
DS N I +T+ RGG I + Y NV G C
Sbjct: 344 -DSPNLDRVIRIKTSTCRGGLIENV-------YVRNVTVGQC 377
>gi|398793179|ref|ZP_10553653.1| endopolygalacturonase [Pantoea sp. YR343]
gi|398211246|gb|EJM97867.1| endopolygalacturonase [Pantoea sp. YR343]
Length = 442
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 166/376 (44%), Gaps = 38/376 (10%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
VS+ +F + DG+TL+T FQ A+ +L S +GG L VP G++ G+ L S++ L L
Sbjct: 3 VSLADFYPIADGETLDTYCFQRALNHLAS---RGGGTLSVPPGRYHLGTLTLGSNINLHL 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYML--RDVVVTGDNGTIDG 158
E GA +L S + Y + + + Y R++ ++G G IDG
Sbjct: 60 EAGATLLASSR---------IEDYQQQLAQSQAELSQHVLLYAAGQRNIRISG-KGVIDG 109
Query: 159 QGSVWW----DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
G W+ D + RP +V F E V + + T + AP + +H V C +VHI
Sbjct: 110 NGDAWFAAEKDHQGYRLPRPQRPRIVVFEDCEQVTLEDFTIIQAPMWTVHLVSCRHVHID 169
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
++++ P T + DS + V + + ++ DAI +K+ + R + I
Sbjct: 170 HLTIDNSMSMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTTQKPAHLR--RAARQILI 227
Query: 275 RRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDA 334
LL+S S + G+E + +V V ++DS I + GG R+++ S
Sbjct: 228 SNCLLRSYS-CAFKIGTETFDDVEDVTVSGCTIFDSNRAIGLLSRD--GGQFRRLLFS-- 282
Query: 335 ELYNINVAFGACGNCGSHPDDDF-------DPDALP-AIDQITFKDIIGTNITIAGNFTG 386
NI +A C D DP P +I+Q+ F ++ G + A N
Sbjct: 283 ---NITLACRHAPPCHWGKADALFVSVRARDPAIAPGSIEQLQFSNVSGV-MEGAINLHA 338
Query: 387 IQEAPFANICLSNISL 402
Q ++ L+N+ L
Sbjct: 339 EQPGQIRDVMLANVQL 354
>gi|298482142|ref|ZP_07000330.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271699|gb|EFI13272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 167/402 (41%), Gaps = 82/402 (20%)
Query: 1 MKMPVALLLLLALCSAILINGEVS-DGQCDDQPTLDPRPHSVS-------ITEFGAVGDG 52
M+ + LLL+L + + V D + ++ + S IT+FGA D
Sbjct: 2 MRRTINLLLMLLFVAEVTFANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 53 KTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNP 112
+ N S + GG + VP G + TG L S++ E+GAV+ S +
Sbjct: 62 EANPCHEAINQAILQCSLS--GGGTVIVPKGTFYTGPITLKSNVNFHFEEGAVLKFSTDQ 119
Query: 113 S--------HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV-- 162
S W+ +D ++ LI Y ++ +TG G IDGQGS+
Sbjct: 120 SLYFPAVLTRWEGIDCYNAH------------PLIYAYGESNIAITG-KGIIDGQGSMET 166
Query: 163 WWDWFSSQSLNYS-----------------------------------RPHLVEFISSEN 187
WW + + RP L+ S
Sbjct: 167 WWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHT 226
Query: 188 VVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAM 247
+++ +T LN+P + IHP++C ++ + ++V P G P+S NV IE+C
Sbjct: 227 ILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDT 284
Query: 248 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 307
G D I++KSG +E G + P+ ++ +R ++++ G V GSE+SGG N+ VE +
Sbjct: 285 GDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEISGGYRNLFVEDCRM 343
Query: 308 YDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC 346
DS N I +T+ RGG I + Y NV G C
Sbjct: 344 -DSPNLDRVIRIKTSTCRGGLIENV-------YVRNVTVGQC 377
>gi|160884725|ref|ZP_02065728.1| hypothetical protein BACOVA_02714 [Bacteroides ovatus ATCC 8483]
gi|156109760|gb|EDO11505.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 527
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 163/366 (44%), Gaps = 41/366 (11%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
++ + KGG + +P GKW +G L S++ L L +G+ I N D + + +
Sbjct: 73 IEEISQKGGGTVIIPKGKWKSGRIVLKSNVNLHLAEGSEIEFPGNAE--DYLPAVFTRHE 130
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTI-------------DGQGSVWWDWFSSQSLN 173
GIE+ G NG ++ +TG G I +G V D ++ +
Sbjct: 131 GIEIMGSGSFIYANGE--DNIAITG-KGVIYGPSLDAEIRQRPNGNTVVEKDILNNAPVE 187
Query: 174 -----------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
+ +P + I+ NV++ +T + +N+ P+YC NV I+ I+V++
Sbjct: 188 KRVFDGMDGRGFYKPKTISPINCTNVLIEGITMERSTFWNVCPIYCENVIIRGITVNSIG 247
Query: 223 ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS 282
P GI +S NV IE C + G D +LK+G E G+ G+PT +V IR L Q
Sbjct: 248 -IPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQQG 306
Query: 283 SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA 342
G V GSE +GG+ NV V + GI F+T + R G + + + N+ A
Sbjct: 307 HG-GVTCGSETAGGVKNVYVHDCVFDGTQIGIRFKTRRNRAGGVNDALYEKIRMINVGEA 365
Query: 343 F-----GACGNCGSHPDDDFDPDAL----PAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
F G+ G + + P A+ P I I K+ I + + GI E P +
Sbjct: 366 FKWDLLGSKRYVGELA-ERYPPRAVNKLTPTIKDIHIKNFIVESAEKILSVNGIPEIPCS 424
Query: 394 NICLSN 399
N+ + N
Sbjct: 425 NVLIEN 430
>gi|298482100|ref|ZP_07000288.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
gi|298271657|gb|EFI13230.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
Length = 460
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 147/322 (45%), Gaps = 41/322 (12%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT++GA G+ NT A AI ++ GG ++ VP+G WLTG + S++ L+LE+
Sbjct: 54 ITDYGAKNGGEVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
A++ + NP D LP+ E L Y L+ + +V +TG GT+ +
Sbjct: 111 NAILNFTDNP-----FDYLPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 164
Query: 162 VWWDWFSS-----QSL----------------------NYSRPHLVEFISSENVVVSNLT 194
W WF ++L N+ RPHL+ F +NV++
Sbjct: 165 TWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGFK 224
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
+P + IH C ++N+ V A + GI + S N +EDC G DA+ +
Sbjct: 225 IRESPFWTIHLYMCDGGLVRNLDVKAHGHN--NDGIDFEMSRNFLVEDCSFDQGDDAVVI 282
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
K+G ++ P ++ IR + + + GSE+SGGI N+ + +S+ +
Sbjct: 283 KAGRNQDAWRLNTPCENIVIRNCQILKGH-TLLGIGSEISGGIRNIYMHDCTAPNSVMRL 341
Query: 315 EF-RTTKGRGGYIRQIVISDAE 335
F +T RGG+I + + + +
Sbjct: 342 FFVKTNHRRGGFIENVYMKNVQ 363
>gi|302796123|ref|XP_002979824.1| hypothetical protein SELMODRAFT_111266 [Selaginella moellendorffii]
gi|300152584|gb|EFJ19226.1| hypothetical protein SELMODRAFT_111266 [Selaginella moellendorffii]
Length = 410
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 193/431 (44%), Gaps = 76/431 (17%)
Query: 32 PTLDPR-----PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWL 86
P L P P ++ EFGA GDG + ++ AF A K A + VP GK
Sbjct: 14 PALSPEGASYDPREFNVVEFGARGDGLSDDSQAFLAA---WKRACHTENATMLVPGGKAF 70
Query: 87 TGSFNL-----TSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLING 141
++ L ++L L ++ G V+ +++ HW + S R Y + G
Sbjct: 71 VVNYLLLTGPCATNLRLKID-GIVLADTRDMIHWSNITTWISIAR-------VYDFSVEG 122
Query: 142 YMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNY---SRPHLVEFI---SSENVVVSNLTF 195
Y G IDGQG WW ++ +Y S L F+ SS N+ + +L F
Sbjct: 123 Y-----------GIIDGQGEEWWRISCRRNSSYVSDSSYRLYSFLTFDSSANITIQDLKF 171
Query: 196 LNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLK 255
+N+P ++ SNV I+ + + AP +SP T GI S+NV IE CII G D IS+
Sbjct: 172 VNSPQMHLAIEESSNVSIKGVEILAPHDSPNTDGIHLHMSNNVSIEKCIIGTGDDCISI- 230
Query: 256 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEMSGG-ISNVQVEKIHLYDSLNG 313
+ T++V IR ++ G S+ + G + +SNV+VE L + G
Sbjct: 231 ----------AKNTSNVVIREIICGPGHGISIGSLGRNKTPEFVSNVKVENSILESTKYG 280
Query: 314 IEFRTTKGRGGY-------------IRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
+ +T +G G+ + Q +I D + N +F +CG+ + D
Sbjct: 281 LRIKTWQGGQGFASNFSYYNVVMMNVLQPIIIDQYYCDGNSSF----SCGTE-----ELD 331
Query: 361 ALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHG 419
A+ + +++ +I+GT+ ++A F P N+ L N+ L+++ GS S C N G
Sbjct: 332 AVK-VSNVSYSNIMGTSASSVALRFQCSLGNPCYNLVLENVFLNLSNGSTPSAFCLNAFG 390
Query: 420 SSES-VFPEPC 429
++ V P C
Sbjct: 391 QNKGLVVPNSC 401
>gi|345519938|ref|ZP_08799345.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254836194|gb|EET16503.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
Length = 594
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 158/366 (43%), Gaps = 41/366 (11%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
+ +++GG + +P GKW + L S++ L L KGA I + D + + +
Sbjct: 146 IAEVSNQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFAGRAE--DYLPAVFTRHE 203
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDG-----------------QGSVWWDWFSS 169
G+E+ G NG ++ +TG+ GTI G + V WD
Sbjct: 204 GVEIMGPAAFIYANGE--NNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDMPIE 260
Query: 170 QSL-------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
Q + + RP + I+ NV++ + + +N+ P+YC NV I+ I+V++
Sbjct: 261 QRIYDGMEGRTFYRPKTISPINCTNVLIEGIAMERSTLWNVVPIYCENVIIRGITVNST- 319
Query: 223 ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS 282
+ P GI +S NV IE C + G D +LK+G E G+ G+PT +V IR L Q
Sbjct: 320 KVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHG 379
Query: 283 SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA 342
G + GSE +G I N+ V + GI F+T + RGG + N+ A
Sbjct: 380 HG-GITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKA 438
Query: 343 F-----GACGNCGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
F G+ G +P + P + I KD I + GI E PF
Sbjct: 439 FTWDLLGSAYYMGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 497
Query: 394 NICLSN 399
+ + N
Sbjct: 498 QVVVEN 503
>gi|365122655|ref|ZP_09339556.1| hypothetical protein HMPREF1033_02902 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642403|gb|EHL81761.1| hypothetical protein HMPREF1033_02902 [Tannerella sp.
6_1_58FAA_CT1]
Length = 427
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 193/429 (44%), Gaps = 48/429 (11%)
Query: 10 LLALCSAILINGEVSDGQCDDQPTLDPR-PHS-VSITEFGAVGDGKTLNTLAFQNAIFYL 67
+ +CS IL G Q L P P + S+T++GA NT+A Q I
Sbjct: 7 VFLICSLIL------SGIVSAQTILKPEIPETRFSVTDYGASASALD-NTVAIQKTI--- 56
Query: 68 KSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVD-PLPSYGR 126
+ GG + +P+G ++ G + S++ L L+ G ++ +V+ P+ G+
Sbjct: 57 DECSAAGGGSVIIPAGTFMCGPIVMKSNINLVLDDGCILKALPYGKGNGIVEGSYPNNGK 116
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSE 186
RY LI+G ++++ V+G G I+G GS WW F + + R L+ F +
Sbjct: 117 -----PDRYAHLISGKRVQNIKVSG-KGVIEGDGSAWWTAFRANR-SIKRGCLIRFDNCR 169
Query: 187 NVVVSNLTFLNAPAYNIHPVY---CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDC 243
N+ + + NAP N+H S++ +++I++ AP E+P + GI + NV I +C
Sbjct: 170 NIEICGIRLQNAP--NVHITLGRGSSDITVRDITIEAPDEAPNSDGI-DVWAPNVLIYNC 226
Query: 244 IIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVE 303
IA G D I++ SG T ++ IR+ + G S+ + GI NV V+
Sbjct: 227 NIACGDDNIAMDSG-----------TKNITIRKCNFGNGHGCSIG---SYTAGIENVLVD 272
Query: 304 KIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDA-- 361
++ + I ++ + RGG + I+ S+ + N+ P D + A
Sbjct: 273 SCSFKNTESAIRMKSNRSRGGGEKNIIYSNITIDNVRKPIFITSYYPKTPKDVTEDSAEE 332
Query: 362 ----LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLSINPGSYNSW--ECS 415
P+ + I ++I + AG G+ E P N+ N+ + G ++ S
Sbjct: 333 VTVTTPSWNNIFLRNIEIYDCEYAGIIWGVPELPIRNVVFDNVKIRATKGMEINYVSNIS 392
Query: 416 NIHGSSESV 424
I+GSS SV
Sbjct: 393 FINGSSISV 401
>gi|383114381|ref|ZP_09935145.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
gi|313693911|gb|EFS30746.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
Length = 460
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 147/322 (45%), Gaps = 41/322 (12%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT++GA G+ NT A AI ++ GG ++ VP+G WLTG + S++ L LE+
Sbjct: 54 ITDYGAQPGGEADNTKAIAAAI---EACNQAGGGRVVVPAGTWLTGPIHFKSNVNLCLEE 110
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
AV+ + NPS D LP+ E L Y L+ + +V +TG GT+ +
Sbjct: 111 NAVLNFTDNPS-----DYLPTVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 164
Query: 162 VWWDWFSS-----QSL----------------------NYSRPHLVEFISSENVVVSNLT 194
W WF ++L N+ RPHL+ F +NV++
Sbjct: 165 TWKVWFKRPQPHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFK 224
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
+P + IH C ++N+ V A + GI + S N +EDC G DA+ +
Sbjct: 225 IRESPFWTIHLYMCDGGLVRNLDVKAHGHN--NDGIDFEMSRNFLVEDCSFDQGDDAVVI 282
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
K+G ++ P ++ IR + + + GSE+SGGI N+ + +S+ +
Sbjct: 283 KAGRNQDAWRLNTPCENIVIRNCQILKGH-TLLGIGSEISGGIRNIYMHDCTAPNSVMRL 341
Query: 315 EF-RTTKGRGGYIRQIVISDAE 335
F +T RGG+I + + + +
Sbjct: 342 FFVKTNHRRGGFIENVYMKNVK 363
>gi|212693826|ref|ZP_03301954.1| hypothetical protein BACDOR_03347 [Bacteroides dorei DSM 17855]
gi|237709356|ref|ZP_04539837.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755031|ref|ZP_06089945.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|423242200|ref|ZP_17223310.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
gi|212663715|gb|EEB24289.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229456741|gb|EEO62462.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234642|gb|EEZ20221.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|392639944|gb|EIY33752.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
Length = 468
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 156/359 (43%), Gaps = 67/359 (18%)
Query: 27 QCDDQPTLDPRPHSV-SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW 85
Q + Q P V +I +FGA +G + + + + GG + VP G++
Sbjct: 32 QIEKQIKKTSFPDRVYNIKDFGA-KEGNNGEIFCHEAINLAILTCSQAGGGTVLVPPGEF 90
Query: 86 LTGSFNLTSHLTLFLEKGAVILGSQNP--------SHWDVVDPLPSYGRGIELPGRRYKS 137
LTG L S++ L LE+GA + S + W+ VD +
Sbjct: 91 LTGPITLKSNVNLHLEEGAYLKFSSEKYLYTPTVLTRWEGVDCYNLH------------P 138
Query: 138 LINGYMLRDVVVTGDNGTIDGQGSV--WWD--------WFSSQS----------LNYS-- 175
LI Y ++ +TG G IDGQ S WW W + L Y+
Sbjct: 139 LIYAYGESNIAITGK-GIIDGQASNDNWWSMCGAPHYGWKEGMTAQKNGGRNKLLMYAET 197
Query: 176 ---------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
RP L+ +++ N+T N+P + IHP++C ++ ++ + V +
Sbjct: 198 FAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSS 257
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
P + G P+SS NV IE+CI G D I++KSG + G + P+ ++ +R ++
Sbjct: 258 --HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMK 315
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAEL 336
G V GSE+SGG N+ VE + DS N I +T RGG I I + + E+
Sbjct: 316 DGHG-GVVVGSEISGGYKNLFVENCKM-DSPNLERVIRIKTNNCRGGVIENIYVRNIEV 372
>gi|423232717|ref|ZP_17219117.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|423247409|ref|ZP_17228459.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
gi|392623156|gb|EIY17261.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|392632549|gb|EIY26508.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
Length = 468
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 156/359 (43%), Gaps = 67/359 (18%)
Query: 27 QCDDQPTLDPRPHSV-SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW 85
Q + Q P V +I +FGA +G + + + + GG + VP G++
Sbjct: 32 QIEKQIKKTSFPDRVYNIKDFGA-KEGNNGEIFCHEAINLAILTCSQAGGGTVLVPPGEF 90
Query: 86 LTGSFNLTSHLTLFLEKGAVILGSQNP--------SHWDVVDPLPSYGRGIELPGRRYKS 137
LTG L S++ L LE+GA + S + W+ VD +
Sbjct: 91 LTGPITLKSNVNLHLEEGAYLKFSSEKYLYTPTVLTRWEGVDCYNLH------------P 138
Query: 138 LINGYMLRDVVVTGDNGTIDGQGSV--WWD--------WFSSQS----------LNYS-- 175
LI Y ++ +TG G IDGQ S WW W + L Y+
Sbjct: 139 LIYAYGESNIAITGK-GIIDGQASNDNWWSMCGAPHYGWKEGMTAQKNGGRNKLLMYAKT 197
Query: 176 ---------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
RP L+ +++ N+T N+P + IHP++C ++ ++ + V +
Sbjct: 198 FAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSS 257
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
P + G P+SS NV IE+CI G D I++KSG + G + P+ ++ +R ++
Sbjct: 258 --HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMK 315
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAEL 336
G V GSE+SGG N+ VE + DS N I +T RGG I I + + E+
Sbjct: 316 DGHG-GVVVGSEISGGYKNLFVENCKM-DSPNLERVIRIKTNNCRGGVIENIYVRNIEV 372
>gi|319644257|ref|ZP_07998770.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|317384248|gb|EFV65220.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 580
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 158/366 (43%), Gaps = 41/366 (11%)
Query: 67 LKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGR 126
+ +++GG + +P GKW + L S++ L L KGA I + D + + +
Sbjct: 132 IAEVSNQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFAGRAE--DYLPAVFTRHE 189
Query: 127 GIELPGRRYKSLINGYMLRDVVVTGDNGTIDG-----------------QGSVWWDWFSS 169
G+E+ G NG ++ +TG+ GTI G + V WD
Sbjct: 190 GVEIMGPAAFIYANGE--NNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDMPIE 246
Query: 170 QSL-------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPP 222
Q + + RP + I+ NV++ + + +N+ P+YC NV I+ I+V++
Sbjct: 247 QRIYDGMEGRTFYRPKTISPINCTNVLIEGIAMERSTLWNVVPIYCENVIIRGITVNST- 305
Query: 223 ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS 282
+ P GI +S NV IE C + G D +LK+G E G+ G+PT +V IR L Q
Sbjct: 306 KVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHG 365
Query: 283 SGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVA 342
G + GSE +G I N+ V + GI F+T + RGG + N+ A
Sbjct: 366 HG-GITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKA 424
Query: 343 F-----GACGNCGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFA 393
F G+ G +P + P + I KD I + GI E PF
Sbjct: 425 FTWDLLGSAYYMGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 483
Query: 394 NICLSN 399
+ + N
Sbjct: 484 QVVVEN 489
>gi|388511385|gb|AFK43754.1| unknown [Medicago truncatula]
Length = 400
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 178/415 (42%), Gaps = 59/415 (14%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGK-------WLTGS 89
RP S ++ ++GAVG+GK T AF +A + A + L +P GK W G
Sbjct: 27 RP-SFNVLDYGAVGNGKNDETRAFVDA-WKDTCIAMHESSTLLIPKGKTFMLQPVWFQGP 84
Query: 90 FNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYK-SLINGYMLRDVV 148
N ++ ++++ I+ +N W + P YK S I + ++
Sbjct: 85 CNSSN---IYVKLEGTIIAPKNIEAW-------------KWPNDNYKGSWIRFIEISGLI 128
Query: 149 VTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYC 208
V G G IDG+G+ WWD S+ P + F + EN+++ LT +N+P +I C
Sbjct: 129 VYG-GGIIDGKGAQWWDCHSNIKCEKENPTALHFHACENLILRELTHINSPRNHISLNAC 187
Query: 209 SNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRP 268
HI + + AP ESP T GI S N+ IE+ I G D I++ G
Sbjct: 188 HGSHISKLHIIAPNESPNTDGIDIAESSNIIIENSKIETGDDCIAINHG----------- 236
Query: 269 TTDVHIRRVLLQSSSGSSV-AFGSE-MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
+ ++I + G SV + G + + N V + NG +T G GY
Sbjct: 237 SNSIYINGIFCGPGHGISVGSLGRNGVHESVENTYVRNCTFNRTTNGARIKTWIGGNGYA 296
Query: 327 RQIVISDAELYNINVAFGACGNCGSHP---DDDFDP-DALPAID--QITFKDIIGTNITI 380
R++ D L +P D +++P D+ A+ +TF++I GT+I
Sbjct: 297 RKVTFEDIILIE-----------ADNPVIIDQEYNPYDSAYAVKVSDVTFRNIRGTSIAK 345
Query: 381 -AGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHGSSESVFPE-PCPELE 433
A ++ NI L I+++ + G C N++G S P PC LE
Sbjct: 346 HAIQLHCDEDITCTNIILEGINITSSIGEEVHASCKNVNGVCTSCIPYVPCLSLE 400
>gi|295086754|emb|CBK68277.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 459
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 151/352 (42%), Gaps = 74/352 (21%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT+FGA D + N S + GG + VP G + TG L S++ LE+
Sbjct: 42 ITDFGAKTDDEANPCHEAINQAILQCSLS--GGGTVIVPKGTFYTGPITLKSNVNFHLEE 99
Query: 103 GAVILGSQNPS--------HWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
GAV+ S + S W+ +D ++ LI Y ++ +TG G
Sbjct: 100 GAVLKFSTDQSLYFPAVLTRWEGIDCYNAH------------PLIYAYGESNIAITG-KG 146
Query: 155 TIDGQGSV--WWDWFSSQSLNYS-----------------------------------RP 177
IDGQGS+ WW + + RP
Sbjct: 147 IIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRP 206
Query: 178 HLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDN 237
L+ S +++ +T LN+P + IHP++C ++ + ++V P G P+S N
Sbjct: 207 QLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKN 264
Query: 238 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 297
V IE+C G D I++KSG +E G + P+ ++ +R ++++ G V GSE+SGG
Sbjct: 265 VLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEISGGY 323
Query: 298 SNVQVEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGAC 346
N+ VE + DS N I +T+ RGG I + Y NV G C
Sbjct: 324 RNLFVEDCRM-DSPNLDRVIRIKTSTCRGGLIENV-------YVRNVTVGQC 367
>gi|315570526|gb|ADU33267.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 404
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 170/380 (44%), Gaps = 31/380 (8%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
H + +FGA G+ +T A Q AI A G ++ P G++L+G+ L S++ L
Sbjct: 19 HIYDVNKFGADSTGRKPSTHAIQKAI---NKAASNNGGTVHFPHGQYLSGAIELKSNIIL 75
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
V+ +P + + G+ + L ++ LI + ++ + G N +DG
Sbjct: 76 DFADDVVLKFLDDPKEYPPLHKKLPNGKIVNL---QFTPLIRAFDHINITIRG-NAVLDG 131
Query: 159 QGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISV 218
G WW S +RP ++ + + N+T ++P +N++ C +V I+ I +
Sbjct: 132 HGETWWKRMPPPS---TRPVFLQIFWVRYLTLENITVKSSPMFNVNLKNCDDVTIRGIKI 188
Query: 219 HAPPE----SPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVH 273
P P T GI +S V I I+ G D I+L D G + PT DV
Sbjct: 189 RNPANYVDPGPNTDGINVNSCRRVHITGVNISTGDDCIAL----DANGKGKTKTPTEDVL 244
Query: 274 IRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD 333
I + + G V+ GS SGG+ NV V + G+ ++ +GRGG + I +
Sbjct: 245 IEDSHMYAGHGG-VSIGSVTSGGLRNVTVRNCIFNGTNRGLFIKSRRGRGGLVEDIHYHN 303
Query: 334 AELYNIN---VAFGACGNCGSHP---DDDF--DP--DALPAIDQITFKDIIGTNITIAGN 383
++ ++ +A A N GS P DF +P + P I + FK+I G ++
Sbjct: 304 IQMVDLRKEGIAIAAIYN-GSDPGLRSRDFYWEPVNETTPFIRNVEFKNIHGDSVLNPIF 362
Query: 384 FTGIQEAPFANICLSNISLS 403
G+ E+P N+ +N+ +
Sbjct: 363 IVGLPESPIENVTFTNVKIE 382
>gi|345513234|ref|ZP_08792756.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229437148|gb|EEO47225.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 468
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 156/359 (43%), Gaps = 67/359 (18%)
Query: 27 QCDDQPTLDPRPHSV-SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW 85
Q + Q P V +I +FGA +G + + + + GG + VP G++
Sbjct: 32 QIEKQIKKTSFPDRVYNIKDFGA-KEGNNGEIFCHEAINLAILTCSQAGGGTVLVPPGEF 90
Query: 86 LTGSFNLTSHLTLFLEKGAVILGSQNP--------SHWDVVDPLPSYGRGIELPGRRYKS 137
LTG L S++ L LE+GA + S + W+ VD +
Sbjct: 91 LTGPITLKSNVNLHLEEGAYLKFSSEKYLYTPTVLTRWEGVDCYNLH------------P 138
Query: 138 LINGYMLRDVVVTGDNGTIDGQGSV--WWD--------WFSSQS----------LNYS-- 175
LI Y ++ +TG G IDGQ S WW W + L Y+
Sbjct: 139 LIYAYGESNIAITGK-GIIDGQASNDNWWSMCGAPHYGWKEGMTAQKNGGRNKLLMYAET 197
Query: 176 ---------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
RP L+ +++ N+T N+P + IHP++C ++ ++ + V +
Sbjct: 198 FAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSS 257
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
P + G P+SS NV IE+CI G D I++KSG + G + P+ ++ +R ++
Sbjct: 258 --HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMK 315
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG---IEFRTTKGRGGYIRQIVISDAEL 336
G V GSE+SGG N+ VE + DS N I +T RGG I I + + E+
Sbjct: 316 DGHG-GVVVGSEISGGYKNLFVENCKM-DSPNLERIIRIKTNNCRGGVIENIYVRNIEV 372
>gi|383120496|ref|ZP_09941224.1| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
gi|382985014|gb|EES68535.2| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
Length = 462
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 144/324 (44%), Gaps = 45/324 (13%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
IT+FGAV G+ NT A AI + GG ++ VP+G WLTG + S++ L LE
Sbjct: 53 KITDFGAVPGGEVDNTKAIAAAI---DACNKAGGGRVVVPAGIWLTGPVHFKSNVNLCLE 109
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+ AV+ + NP D LP+ E L Y L+ + +V ++G GT+ +
Sbjct: 110 EDAVLSFTDNPE-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAISG-KGTLQPKM 163
Query: 161 SVWWDWFSS-----QSL----------------------NYSRPHLVEFISSENVVVSNL 193
W WF Q+L N+ RPHL+ F +NV++
Sbjct: 164 GTWKVWFKRPAPHLQALKELYTKASTNVPVIERQMATGENHLRPHLIHFNRCKNVMLDGF 223
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+P + IH C ++N+ V A + GI + S N +EDC G DA+
Sbjct: 224 KIRESPFWTIHLYMCDGGIVRNLDVRAHGHN--NDGIDFEMSRNFLVEDCSFDQGDDAVV 281
Query: 254 LKSGWDEYGIAYGRPTTDVHIR--RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL-YDS 310
+K+G ++ P ++ IR R+L + + GSE+SGGI N+ + Y
Sbjct: 282 IKAGRNQDAWRLNTPCENIVIRNCRIL---KGHTLLGIGSEISGGIRNIYMHDCTAPYSV 338
Query: 311 LNGIEFRTTKGRGGYIRQIVISDA 334
+ +T RGG+I I + +
Sbjct: 339 MRLFFVKTNHRRGGFIENIYMKNV 362
>gi|423301868|ref|ZP_17279891.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
gi|408470959|gb|EKJ89491.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
Length = 752
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 147/327 (44%), Gaps = 41/327 (12%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT++GA G+T NT A AI ++ GG ++ VP G WLTG + S++ L+LE+
Sbjct: 344 ITDYGAKSGGETDNTKAIAAAI---EACYKAGGGRVVVPDGIWLTGPIHFKSNVNLYLEE 400
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
AV+ S NP D LP+ E L Y L+ + +V ++G GT+ +
Sbjct: 401 NAVLSFSDNPK-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAISG-KGTLQPKMG 454
Query: 162 VWWDWFSS-----QSL----------------------NYSRPHLVEFISSENVVVSNLT 194
W WF ++L N RPHL+ F +N+ +
Sbjct: 455 TWRVWFKRPQPHLEALKELYTKASTGVPVEERQMAVGENNLRPHLIHFNRCKNIQLEGFR 514
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
+P + IH C ++N+ V A + GI + S N +E+C G DA+ +
Sbjct: 515 IRESPFWTIHIYMCDGGVVRNLDVRAHGHN--NDGIDFEMSKNFLVENCSFDQGDDAVVI 572
Query: 255 KSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGI 314
K+G ++ P ++ IR + + + GSE+SGGI N+ + + +S+ +
Sbjct: 573 KAGRNQDAWRLNTPCENIVIRNCQILKGH-TLLGIGSEISGGIRNIYMHDCTVPNSVMRL 631
Query: 315 EF-RTTKGRGGYIRQIVISDAELYNIN 340
F +T RGG+I I + D N+
Sbjct: 632 FFVKTNHRRGGFIENIYMKDVNAGNVQ 658
>gi|452958539|gb|EME63892.1| endopolygalacturonase [Amycolatopsis decaplanina DSM 44594]
Length = 453
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 144/312 (46%), Gaps = 31/312 (9%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+ SI +FGA GDGKT NT A + AI ++ +GG + VP G ++TG+ L S + L
Sbjct: 55 RTFSILDFGARGDGKTDNTAAIRKAI---ETANARGGGHVVVPRGTFVTGAVYLKSDVDL 111
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
L GAV+ + S + V L Y GIE R +I Y ++ VTG GT+D
Sbjct: 112 HLAAGAVLAFDSDASKFPNV--LTRY-EGIECVNR--SPMIYAYKESNIAVTG-QGTLDA 165
Query: 159 QGSVWWDWFSSQ--------------------SLNYSRPHLVEFISSENVVVSNLTFLNA 198
G+ W+ + S + R VE S + V++ +T N
Sbjct: 166 AGTASWNKGKDREYLESLVAKGIPPERRIVPGSGHTMRSTFVEPYSCDTVLIQGITLKNP 225
Query: 199 PAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGW 258
+ +HP C NV I + A T P+S D+V I + + D I+LKSG
Sbjct: 226 MFWQLHPTLCRNVTIDGVRTDASTAHSNTDACDPESCDHVVIVNSHLGAHDDNIALKSGR 285
Query: 259 DEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY-DSLNGIEFR 317
D G G P ++ + ++ + G ++ GSE +GGI +V K+ + ++ G+ +
Sbjct: 286 DADGRRVGVPCRNIVVANCVMDGNWG-AITCGSEQTGGIRDVYAYKLTVTGETKYGLYVK 344
Query: 318 TTKGRGGYIRQI 329
+ RGG+ +
Sbjct: 345 SNTLRGGFTENV 356
>gi|86141279|ref|ZP_01059825.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
gi|85831838|gb|EAQ50293.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
Length = 483
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 182/417 (43%), Gaps = 77/417 (18%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+ +I ++GA G LN A +AI + GG ++ +P+G++LTG +L S++ L
Sbjct: 65 TFNILDYGAQEGGTVLNADAIADAIEACNA---AGGGRVLIPAGRFLTGPIHLKSNVNLH 121
Query: 100 LEKGAVILGSQNPSHWDVVDPLP----SYGRGIELPGRRYKSLINGYMLRDVVVTGDNGT 155
LE+GA +L + + S + LP SY G+E+ Y LI +++ VTG GT
Sbjct: 122 LEEGAEVLFTTDKSAY-----LPVVHTSY-EGMEI--MNYSPLIYAKGQKNIAVTGK-GT 172
Query: 156 IDGQGSV--WWDWFSSQSLNYS------------------------------------RP 177
+GQ WW W ++ + RP
Sbjct: 173 FNGQADKENWWPWCGAERYGHKEGAPKQKDDHNIPALFTMIEDGTPVEERIFGEGHQLRP 232
Query: 178 HLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDN 237
+E + ENV++ +TF NAP + IHP+ V + ++V++ P G P+ S
Sbjct: 233 LFLETLECENVLIQGVTFTNAPFWVIHPLKSKYVTVDGVTVNS--HGPNNDGCDPEYSKY 290
Query: 238 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 297
V I +C G D I++KSG + G P+ ++ + ++ G V GSE+S G+
Sbjct: 291 VHITNCKFNTGDDCIAIKSGRNGDGRRVNIPSENIVVENCDMKDGHG-GVVMGSEISAGV 349
Query: 298 SNVQVEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAE-------LYNINVAFGACG 347
NV V + +S N I +T RGG++ + + D E + IN +G G
Sbjct: 350 RNVFVRNCTM-NSPNLDRAIRIKTNTLRGGFVENVYVKDIEVGQVKEAVLKINTYYGIYG 408
Query: 348 NCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLS 403
+ +F +P I I +++ N G G +E P I N+++
Sbjct: 409 ----KQEGEF----IPTIQNINLENVTVENGGKYGLLIQGREEKPVTGISFKNVTIK 457
>gi|399032135|ref|ZP_10731774.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069546|gb|EJL60896.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 449
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 177/406 (43%), Gaps = 45/406 (11%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKW-LTGSFNLTSHLTL 98
V++ + GA GD + + F A+ K G + VP G + L G + S++ L
Sbjct: 43 QVNVAKLGAKGDSISNSKPFFDKAMALCKK---NNGGTIVVPKGIYFLNGPIHFVSNVNL 99
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+EKGA I S NP ++ + G I Y LI Y ++ ++G+ GTIDG
Sbjct: 100 KIEKGAKIKFSDNPENYLPMVLTSWEGTMI----YNYSPLIYAYDCTNIAISGE-GTIDG 154
Query: 159 QGSVWWDWFS---------SQSLNYS---------------RPHLVEFISSENVVVSNLT 194
+G W F S+ +N++ RP +++F +N++V N+
Sbjct: 155 EGGKTWKSFKDKEGKGKELSREMNHNSIPINERKFGTGYFLRPQMIQFFKCKNILVENIR 214
Query: 195 FLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISL 254
N+P + +H + ++ ++ IS + + GI P+ + +V IE+ G D I++
Sbjct: 215 IENSPFWCLHLLKSESITVRGISYKSLNYN--NDGIDPEYAKDVLIENVTFNNGDDNIAI 272
Query: 255 KSGWDEYGIA-YGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN- 312
K+G D G A P+ ++ IR + G V GSEMS G+ NV VE L
Sbjct: 273 KAGRDHEGRANSATPSENIIIRNCNFKGLHG--VVIGSEMSAGVQNVYVENCKTVGYLKR 330
Query: 313 GIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKD 372
GI +T RGG+I+ + + + +L + N F + I ++F D
Sbjct: 331 GIYLKTNADRGGFIKNVFVRNIQLDEVEDCLYITANYHGE-GKGFQSE----ISNVSFSD 385
Query: 373 IIGTNITIAG-NFTGIQEAPFANICLSNISLSINPGSYNSWECSNI 417
I + G G + NI L+NI + + +S N+
Sbjct: 386 ISCNKASATGIVIQGFPDKKIKNISLNNIEIKWAKNAISSTNAENV 431
>gi|440715734|ref|ZP_20896264.1| glycoside hydrolase family 28 [Rhodopirellula baltica SWK14]
gi|436439283|gb|ELP32750.1| glycoside hydrolase family 28 [Rhodopirellula baltica SWK14]
Length = 497
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 169/359 (47%), Gaps = 32/359 (8%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
++ +GA+GDGK ++T A Q I + + GG + VP+G + G+ L S++TL L+
Sbjct: 52 NVKRYGAIGDGKAMDTKAVQETI---DACHEAGGGVVRVPAGDFQIGTIVLKSNVTLSLD 108
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
GA +LGS N + + P+ + R E LI +++ + G G IDG+G+
Sbjct: 109 HGASLLGSTNVADY----PIENLRRPREGAAH---CLIYAEDAKNITIEG-LGVIDGRGT 160
Query: 162 VWWDWFSSQSLNYS----RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNIS 217
++F + RP L+ S E++ S +T+ + +H + C N+H ++
Sbjct: 161 --HEFFPRKRRGGKNSGIRPRLMRMESCEDLTFSGVTYKRPAFWGLHLIDCKNIHFSAVT 218
Query: 218 VHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRV 277
+ + G+ D +NV IE+C ++ G DAI LKS + P ++ +R
Sbjct: 219 LRFRNNNYNNDGLDLDGCENVLIENCDLSTGDDAICLKSSMN--------PCRNIVVRGC 270
Query: 278 LLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDS-LNGIEFRTTKGRGGYIRQIVISDAEL 336
S++ ++V FGS GG ++ + + +D + I+ ++ GG + I IS +
Sbjct: 271 RADSNT-AAVKFGSSSRGGFLDISITNCYFHDCPMGAIKLQSVD--GGRLENITISRVVM 327
Query: 337 YNINVA-FGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFAN 394
++ F GN GSH D + + I D++ +TI N EA + N
Sbjct: 328 KDVGSPIFLRLGNRGSHFGDGPADAPVGTLKNIRISDVV-AEVTIE-NRAKAAEAVYKN 384
>gi|254444100|ref|ZP_05057576.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
gi|198258408|gb|EDY82716.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
Length = 476
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 143/298 (47%), Gaps = 44/298 (14%)
Query: 74 GGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPS-YGRGIELPG 132
GG + VP+G + TG +L S++ L + +GA + S + D LP+ + R +
Sbjct: 90 GGGTVLVPAGTYHTGPVHLLSNVNLHVAEGATLKFST-----EAKDYLPAVFTRWEGVEC 144
Query: 133 RRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WWDW--------------------FSSQ 170
Y LI + ++ VTG GT+DGQ S+ W DW + ++
Sbjct: 145 YNYSPLIYAFEQTNIAVTG-KGTLDGQASLDNWLDWNVKSAPGGSKQIPARNRLIEYGAK 203
Query: 171 SL----------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHA 220
++ RP+ ++ +NV++ ++T +N+P + IHPV NV ++ ++V +
Sbjct: 204 GTPVDERVFGEGDFLRPNFLQPYRCDNVLIEDVTIINSPMWEIHPVLSRNVTVRGVTVVS 263
Query: 221 PPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ 280
G P+SS +V IE+C+ G D I++KSG + G P+ ++ +R ++
Sbjct: 264 --HGSNNDGCNPESSKDVLIENCVFDTGDDCIAIKSGRNNDGRRVNVPSENIIVRNCKMK 321
Query: 281 SSSGSSVAFGSEMSGGISNVQVEKIHLY--DSLNGIEFRTTKGRGGYIRQIVISDAEL 336
G V GSE+SGG+ NV VE + + + +T RGG I + + D E+
Sbjct: 322 DGHG-GVVIGSEISGGVRNVFVENCEMSSPNLDRALRIKTNSIRGGLIENVFVRDVEV 378
>gi|340619595|ref|YP_004738048.1| polygalacturonase [Zobellia galactanivorans]
gi|339734392|emb|CAZ97769.1| Polygalacturonase, family GH28 [Zobellia galactanivorans]
Length = 462
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 150/318 (47%), Gaps = 40/318 (12%)
Query: 35 DPRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTS 94
+P+ T+FGA+ +GKT+NT A Q AI + + GG + + G +++G+ L
Sbjct: 21 NPKSDVYKATDFGAIANGKTVNTEAIQRAI---DACNEGGGGTVILDKGDYVSGTLLLKD 77
Query: 95 HLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNG 154
+TL + + A ++GS NP + +D +R LI ++ VTG G
Sbjct: 78 KVTLHIAEDAQLIGSSNPLDYQSIDTFTD-----ATGQKRGNCLIGAKNATNIAVTG-KG 131
Query: 155 TIDGQGSVW-----------WDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNI 203
TIDG G + + ++ +RP L+ F++S + V ++ A+
Sbjct: 132 TIDGNGEAFLAKNIKAKIKELNLAQTEGFGSNRPFLLRFVNSSQIKVQDVHLRQPAAWTC 191
Query: 204 HPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGI 263
H +++ ++N+S+++ GI DSS + I++C I G DAI +K+
Sbjct: 192 HFYQSNDILVENVSIYSHAHKNND-GIDLDSSYDAIIKNCDINTGDDAICIKT------- 243
Query: 264 AYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG 323
+PT +V + L+S G S+ FG+E G + N+ + +YD+ +G
Sbjct: 244 TSPKPTYNVQVSDCKLRSDWG-SIKFGTESMGDMYNIDITNCQIYDT-----------KG 291
Query: 324 GYIRQIVISDAELYNINV 341
G I+ + + A ++++ +
Sbjct: 292 GGIKVLSVDGANIHDVTI 309
>gi|427387343|ref|ZP_18883399.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
gi|425725504|gb|EKU88375.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
Length = 923
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 150/331 (45%), Gaps = 42/331 (12%)
Query: 40 SVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLF 99
+++I+E GA + L T AI + KGG + VP G+W +G L S++ L
Sbjct: 54 TINISERGARSN--VLVTSIINQAIVDVNK---KGGGTVLVPPGRWKSGRIMLKSNVNLH 108
Query: 100 LEKGAVILGSQNPSHWDVVDPLP---SYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
+ +GA I S D+ D LP + GIEL G + I ++ VTG GTI
Sbjct: 109 IAEGAEIEFSG-----DIEDYLPAVFTRHEGIELFG--AGAFIYADGENNIAVTG-KGTI 160
Query: 157 DG-------------QGSVWWDWFSSQSLN-----------YSRPHLVEFISSENVVVSN 192
G V D ++ LN + P + I+ NV +
Sbjct: 161 TGPALDSEVRKRTNTAAVVEIDVPATMPLNERLFDGMEGRDFQPPRTIAPINCTNVFIEG 220
Query: 193 LTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAI 252
+T + +N+ P YC NV I+ I+V++ E P GI +SS NV IE C + D
Sbjct: 221 ITMNRSALWNVVPTYCENVIIRGITVNSL-EIPRGDGIDIESSKNVLIEYCTLNTHDDCF 279
Query: 253 SLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN 312
+LKSG E G+ GRPT +V IR L + G + GSE +G I N+ ++
Sbjct: 280 TLKSGRGEEGVHIGRPTANVVIRHSLATNGPG-GITCGSETAGNIKNIYAHDCVFKGTMT 338
Query: 313 GIEFRTTKGRGGYIRQIVISDAELYNINVAF 343
GI F+T + RGG ++ + ++ AF
Sbjct: 339 GILFKTRRPRGGGTENVLYERIRMIDVKDAF 369
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 20/226 (8%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
IT++G V D + T Q I S GG + +P G +L+GS L+LE+
Sbjct: 540 ITDYGVVNDSTIVQTEKIQAVI---DSAEKNGGGVVIIPKGTFLSGSLFFKPKTHLYLEE 596
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
A + GS + S + VVD + G L + + +L+N + V+G GTI+G G
Sbjct: 597 KATLKGSDDISDFAVVD---TRMEGQSL--KYFAALLNADEVDGFTVSG-KGTINGNGMR 650
Query: 163 WWD--WFSSQ------SLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
+W W + +++ RP L+ +S+NV +S + +N+P + H C + +
Sbjct: 651 YWKSFWLRREVNPKCTNMDELRPRLLYVSNSKNVQISGVRLINSPFWTTHFYKCEQLRLL 710
Query: 215 NISVHAPP---ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSG 257
N+ + +P +P T G+ D NV I++C I++ D I+LK G
Sbjct: 711 NLHITSPTSPVHAPSTDGVDIDVCTNVLIKNCYISVDDDGIALKGG 756
>gi|317046607|ref|YP_004114255.1| glycoside hydrolase family protein [Pantoea sp. At-9b]
gi|316948224|gb|ADU67699.1| glycoside hydrolase family 28 [Pantoea sp. At-9b]
Length = 443
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 166/386 (43%), Gaps = 57/386 (14%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
+S+ +F V DG+TL+T FQ A+ +L +GG L VP G++ G+ L SHL L L
Sbjct: 3 LSLADFHPVADGETLDTACFQRALDHL---TQRGGGTLTVPPGRYRLGTLTLGSHLKLHL 59
Query: 101 EKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYML--RDVVVTGDNGTIDG 158
GA +L SQ + Y + + Y + R++ ++G G IDG
Sbjct: 60 AAGATLLASQR---------VEDYQHCLAQSQAELSQHVLLYAVGQRNISISG-KGVIDG 109
Query: 159 QGSVWW----DWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
G W+ D + RP ++ F E V + T + AP + +H V C +VH++
Sbjct: 110 DGEAWFAAEKDAQGYRLPRPQRPRIIVFEDCEQVTLQEFTIVQAPMWTVHLVSCRHVHVE 169
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
++++ P T + DS + V + + ++ DAI +K+ +PT H+
Sbjct: 170 HLTIDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTTQ--------KPT---HL 218
Query: 275 RRVLLQ--------SSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 326
RR Q S + G+E + +V V ++DS I + GG
Sbjct: 219 RRAARQIMISNCQLRSWSCAFKIGTETFDDVEDVTVSGCTIFDSNRAIGLLSRD--GGSF 276
Query: 327 RQIVISDAELYNINVAFGACGNCGSHPDDDF-------DPDALP-AIDQITFKDIIGT-- 376
R+++ S N+ +A C D DP +P +I+Q+ F ++ G
Sbjct: 277 RRLLFS-----NLTLACHLAPPCHWGKADALFVSVRARDPAIVPGSIEQLQFSNVSGVME 331
Query: 377 -NITIAGNFTG-IQEAPFANICLSNI 400
I + G I+E +N+ L +
Sbjct: 332 GAINLHSEVAGQIREVMLSNVQLRQV 357
>gi|315570530|gb|ADU33269.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 395
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 169/383 (44%), Gaps = 24/383 (6%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
+T++GA G+ +T A AI GG ++ P G++LTG L S++ + +
Sbjct: 22 VTKYGADRTGRVPSTDAIARAI---NDAETHGGGLVHFPPGRYLTGPIELKSNMIMDVGD 78
Query: 103 GAVILGSQNPSHWDVVD-PLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
G +I +P+ + + LP R I LP + LI + ++V + G N DG+G
Sbjct: 79 GTIITFLDDPALYPPLHGKLPDGQRRI-LP---FTPLIRAWGQKNVGIRG-NVIFDGRGE 133
Query: 162 VWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAP 221
VWWD + +RP + F NVV+ T ++P +N++ +Y + + I I + P
Sbjct: 134 VWWDRLPPPA---TRPIFINFFDCHNVVLKGFTIKSSPMFNVNILYSNGIVIDGIRIRNP 190
Query: 222 P----ESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRR 276
+ P T GI S + I +A G D I++ + +G R PT DV I
Sbjct: 191 ESYHGKGPNTDGINVVSVRRLHITGVDVATGDDCIAINA----WGHGKERIPTEDVLIED 246
Query: 277 VLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAEL 336
+ G V+ GS +GG+ N+ V + G+ +T + RGG I I + +
Sbjct: 247 SHMSIGHG-GVSIGSVTAGGLRNITVRNCVFDGTTRGLLIKTNRERGGTIEDIHYENIVM 305
Query: 337 YNINVAFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFAN 394
N+ A + + D P D P + I + ++ G++ G+ EAP N
Sbjct: 306 NNMRWEGIAITDLYNDKDSGRKPIGDQTPFVRNIKYNNVRGSSKKSPIMLIGLPEAPVEN 365
Query: 395 ICLSNISLSINPGSYNSWECSNI 417
I + N + ++ N+
Sbjct: 366 IEIENCDIRSKRPNFQLQNTRNV 388
>gi|408501581|ref|YP_006865500.1| pectinesterase [Bifidobacterium asteroides PRL2011]
gi|408466405|gb|AFU71934.1| pectinesterase [Bifidobacterium asteroides PRL2011]
Length = 1519
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 173/381 (45%), Gaps = 59/381 (15%)
Query: 38 PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLT 97
P ++ +FGA GDG T +T A Q I K + Q+Y+P+G +L+G+ NL S ++
Sbjct: 133 PKRYNVRDFGASGDGSTKDTAAIQKTIDACK----EKNCQVYLPAGTYLSGALNLHSDMS 188
Query: 98 LFLEKGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRR--YKSLIN-GYMLRDVVVTGDN 153
F++ GA + S+ + + P S IE + GR Y SL+N G M VT N
Sbjct: 189 FFVDAGAQLKPSRELADY----PFTSARHDIEDVMGRNPAYSSLLNAGEMDSKAGVTTRN 244
Query: 154 GTIDGQGSV-----------WWDWFS--SQSLNYSRPHLVEFISSENVVVSNLTFLNAPA 200
I G G++ +D F+ N P + + ++V +L +
Sbjct: 245 IKIMGPGTIGDEANGLLLRKAYDDFTHNGDGGNLDIPSDI-YQPGQHVGGGSLISMK--- 300
Query: 201 YNIHPVYCSNVHIQN------ISVHAPPESPYTVGIV----------PDSSDNVCIEDCI 244
N+ VY +HI+N + V++ + Y + +V P+SS NV I
Sbjct: 301 -NVGGVYLDGIHIRNGMMWTVVPVYSKDITAYGLQLVTSVHNGDGFDPNSSSNVWILGTS 359
Query: 245 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 304
+ G D ++KSG D GIA RP+ +++ R + S G V GSEMSGG+ NV VE
Sbjct: 360 FSTGDDCSAIKSGKDAEGIAIARPSENIYFRGDVFNSGHG-GVTIGSEMSGGVRNVFVED 418
Query: 305 IHLY------DSLN-GIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDF 357
+ ++N GI + + RGGY+R I + D+ + I+V N DD
Sbjct: 419 STIVPVDLTSGAVNPGIRVKVSPKRGGYVRNIQVRDSVINKISV----ITNYDRTSVDDL 474
Query: 358 DPDA-LPAIDQITFKDIIGTN 377
D LP + F I N
Sbjct: 475 DSQTPLPQTENFKFSHITAPN 495
>gi|383315603|ref|YP_005376445.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
gi|379042707|gb|AFC84763.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
Length = 441
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 177/425 (41%), Gaps = 54/425 (12%)
Query: 3 MPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQN 62
+PV LLL+ C+A G P L R ++ D +L Q
Sbjct: 15 LPVVTALLLSCCAA---------GTAMAGPALCQR-----LSAPARTADATSL----LQQ 56
Query: 63 AIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLP 122
AI + KGG QL + +G ++T L S + L L+ GAV+ G H+ P
Sbjct: 57 AIDRCSA---KGGGQLRLAAGVFMTAPLALRSGVDLHLDAGAVLRGVAGQQHYR-----P 108
Query: 123 SYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLN--------- 173
+Y + P R ++L+ +R V ++G+ G+IDG G WW L
Sbjct: 109 AY---MNWPYRFGEALLGMDGVRHVRISGE-GSIDGFGQQWWPQAQQARLTGEKQTLALG 164
Query: 174 ------YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYT 227
RP L+E S +V + + +NAP +N+ Y ++ I+ +S+ P +SP T
Sbjct: 165 IPASNGLPRPWLIEIHRSADVRIEGVHIINAPMWNLVTRYSHDIDIRGVSILNPADSPNT 224
Query: 228 VGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV 287
GI +S +V I D I+ G D I++KSG + T DV I + L G SV
Sbjct: 225 DGIDVVASRHVRIRDSRISTGDDCIAIKSGLPGSRLP-AEATVDVRIDHLWLGRGHGLSV 283
Query: 288 AFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINVAFGACG 347
GSE GI V V + + G+ ++ + RG I I + + A
Sbjct: 284 --GSETLFGIRGVDVRDVVFQGTDAGVRIKSGRDRGNRISDIHFRHLRMKGVGTAISVLA 341
Query: 348 NCGSHPDDDFDP-----DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 402
P + DP P I ++ D+ +AG G+ E+P I L ++SL
Sbjct: 342 YY-PKPAPEQDPAQAVTATTPWISDVSVTDVQAEGSRVAGLLIGLPESPLRGIRLGHLSL 400
Query: 403 SINPG 407
G
Sbjct: 401 QAGSG 405
>gi|297834448|ref|XP_002885106.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330946|gb|EFH61365.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 454
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 187/425 (44%), Gaps = 58/425 (13%)
Query: 39 HSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTL 98
+++ +T+ GA+GDG T ++ AF A + + G QL VP+G +T L
Sbjct: 22 NALDVTQLGAIGDGVTDDSQAFLKA--WEAVCSGTGDGQLVVPAG--------VTFMLQP 71
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYML----RDVVVTGDNG 154
+G+ P ++ L + +G +K + ++L +V+ G G
Sbjct: 72 LKFQGSC---KSAPIFVQILGNLVASSKG------NWKGDKDQWILFTDIEGLVIEG-GG 121
Query: 155 TIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 214
I+GQGS WW+ SRP ++F S N+ +S LT +++P +IH C+ V I
Sbjct: 122 EINGQGSSWWEH------KGSRPTALKFKSCNNLRLSGLTHVDSPMAHIHINDCNYVTIS 175
Query: 215 NISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHI 274
++ ++AP SP T GI SS NV I+DC+I G D I++ SG T+++ I
Sbjct: 176 SLRINAPESSPNTDGIDVGSSSNVVIQDCVIGTGDDCIAINSG-----------TSNIRI 224
Query: 275 RRVLLQSSSGSSVAFGSEMSGG----ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIV 330
+ G ++ GS G + NV V+ + + NG +T +G GY R I
Sbjct: 225 SGI--DCGPGHGISIGSLGKDGETATVENVCVQNCNFRGTTNGARIKTWQGGSGYARMIT 282
Query: 331 ISDAELYNIN--VAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAG-NFTGI 387
+ L N+ + N G + + ++ + + IGT+ + G +F
Sbjct: 283 FNGITLDNVENPIIIDQLYNGGDSDKAKDHKSSAVEVSKVVYSNFIGTSKSEYGVDFRCS 342
Query: 388 QEAPFANICLSNISL---SINPGSYNSWECSNIHGSSESVFPE-PC----PELENSSSNS 439
+ P I L ++ + S G +C N+ G S P C P++ +S+
Sbjct: 343 ETVPCTEIFLRDVKIETASSGSGQVAQGQCLNVRGVSTLAVPGLECLALSPDMLSSTQLP 402
Query: 440 SSTCF 444
TC
Sbjct: 403 EQTCM 407
>gi|197105923|ref|YP_002131300.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479343|gb|ACG78871.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 468
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 162/387 (41%), Gaps = 51/387 (13%)
Query: 44 TEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLT-GSFNLTSHLTLFLEK 102
FG DG++ A Q AI + GG ++ + G W + G L SH+ L +E
Sbjct: 61 ARFGGRADGRSDARPAIQKAI---DAAHRAGGGRVTLSPGVWFSRGPVRLKSHVELRVEA 117
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQG-S 161
GA +L S P D + P+ + G E+ Y I + DV +TG G IDG S
Sbjct: 118 GATLLFSPEPD--DYLPPVKTRWEGTEV--YTYSPFIYAAGVEDVAITG-GGVIDGNAQS 172
Query: 162 VWWDWFSSQSLNYS-----------------------RPHLVEFISSENVVVSNLTFLNA 198
+ W + ++ RP L++ + V + T N+
Sbjct: 173 RFHAWHNLAEPDFQRLRRMGFEGVPVAQRRFGKGTHLRPPLIQVFGGKRVRLEGFTARNS 232
Query: 199 PAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGW 258
P + H VY V ++ I+V + P G+ +SS V IE+ G D++ +KSG
Sbjct: 233 PFWVNHLVYADEVVVRGITVDS--HFPNNDGVDVESSTRVLIENSRFRTGDDSVVIKSGR 290
Query: 259 DEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRT 318
D G GRP+ V +R + G +A GSEMSGG+ +V L L+ I F+
Sbjct: 291 DLDGRRIGRPSAWVLVRGNDMGGEDG--IALGSEMSGGVHDVFFTDNVLRKGLSAIRFKA 348
Query: 319 TKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNI 378
RGG + ++ + + + + F N P L T++DI+ N
Sbjct: 349 NLDRGGTVERVRVRNMTVEDFGTLFWFQLNY---------PGELGGNFPSTYRDIVFENF 399
Query: 379 TIAGNFTGIQ-----EAPFANICLSNI 400
+ G T + +AP ++ L NI
Sbjct: 400 KVGGAGTFFEAHAPAQAPLKDVVLRNI 426
>gi|212695092|ref|ZP_03303220.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
gi|212662408|gb|EEB22982.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
Length = 475
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 147/320 (45%), Gaps = 41/320 (12%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
SI ++GAV GK NT A AI + GG ++ +P+G+WLTGS + S++ L L
Sbjct: 55 SIVDYGAVEGGKQKNTEAIAKAI---DACNKAGGGRVVIPAGEWLTGSIHFKSNVNLHLA 111
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+ A++ + +P+ D LP+ E + Y L+ + ++ +TG G +
Sbjct: 112 ENAIVRFTDDPA-----DYLPAVMTSWEGMECYNYSPLLYAFECENIAITG-KGLLKPHM 165
Query: 161 SVWWDWFS---------------------------SQSLNYSRPHLVEFISSENVVVSNL 193
+W WF ++ N RPHL++F +NV++
Sbjct: 166 GLWKVWFKRPPAHMEALKELYTMASTDVPVEQRQMAKGENNLRPHLIQFNRCKNVLLDGF 225
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+P + IH +N++V A + GI + + N IEDC+ G DA+
Sbjct: 226 HIEESPFWTIHMYLVDGGIARNLNVKAMGHN--NDGIDLEMTRNFLIEDCVFEQGDDAVV 283
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG 313
+KSG ++ PT ++ +R L+ + + + GSE+SGG+ N+ + ++++
Sbjct: 284 IKSGRNQDAWRLNTPTENIVVRNCLVLAGQ-TLLGVGSEISGGVRNIYMHDCEAPNNVHR 342
Query: 314 IEF-RTTKGRGGYIRQIVIS 332
+ F +T RG ++ + +
Sbjct: 343 LFFIKTNHRRGAFVENVYME 362
>gi|86143609|ref|ZP_01061994.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830056|gb|EAQ48517.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 491
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 199/440 (45%), Gaps = 57/440 (12%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEK 102
+ ++ A+ DG L T A Q A + + A GG + G +L+GS + ++ + +
Sbjct: 54 VNDYDAIADGSALTTTAIQQA---IDAAAANGGGTVTFKPGTYLSGSIFIKENVHFNIPE 110
Query: 103 GAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV 162
G ILGS++ + +D + GIE+ + +LIN ++V + G+ G +DGQG V
Sbjct: 111 GVAILGSESIEDYPEIDTRVA---GIEM--KWPAALINVLDQKNVTIDGE-GLVDGQGKV 164
Query: 163 WWDWFSSQSLNY-------------SRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCS 209
+WD++ + Y RP ++ENV + +L A + + +Y +
Sbjct: 165 YWDYYWNLREEYEPKGLRWIVDYDAKRPRTFLLQNAENVFLKDLNIQRAGFWTVQVLYSN 224
Query: 210 NVHIQNISV--HAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
++ + +++ + P T GI DSS + +++C I D LK+G D G+ R
Sbjct: 225 HITVDGLTIRNNIGGHGPSTDGIDIDSSKYILVQNCDIDCNDDNFCLKAGRDWDGLRVDR 284
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIR 327
PT V IR + + SG + GSE SG I +V V I + G++ ++ RGG +
Sbjct: 285 PTEYVVIRDCIALAGSGLT-TIGSETSGDIRHVFVSNIQGKGTKTGLKIKSATNRGGTVE 343
Query: 328 QIVISDAELYNINVAFGACGNCG-----SHPDDDFDPDALPA-----IDQI--------T 369
I + + ++ ++ N S + +D D++P ++++ T
Sbjct: 344 DIHMQNIKMDSVGTFMQVSMNWNPSYSYSKLPEGYDYDSIPKRWKTLLEEVTPPEKGIPT 403
Query: 370 FKDIIGTNITIAGN-----FTGIQEAPFANICLSNISLSINPGSY----NSWECSNI--- 417
FKDI +NI + G G++ + +NI L+++ ++ W N+
Sbjct: 404 FKDISISNIEVQGAKRAIYVNGMETSTVSNIQLTDVHIAAQEAGQITYSKDWTLDNVSLN 463
Query: 418 --HGSSESVFPEPCPELENS 435
GS+ ++ P E N+
Sbjct: 464 IADGSTLTIENAPGVEFPNT 483
>gi|302807555|ref|XP_002985472.1| hypothetical protein SELMODRAFT_122081 [Selaginella moellendorffii]
gi|300146935|gb|EFJ13602.1| hypothetical protein SELMODRAFT_122081 [Selaginella moellendorffii]
Length = 410
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 192/431 (44%), Gaps = 76/431 (17%)
Query: 32 PTLDPR-----PHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWL 86
P L P P ++ EFGA GDG + ++ AF A K A + VP GK
Sbjct: 14 PALSPEGASYDPREFNVVEFGARGDGLSDDSQAFLAA---WKRACHTENATMLVPGGKAF 70
Query: 87 TGSFNL-----TSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLING 141
++ L ++L L ++ G V+ +++ W + S R
Sbjct: 71 VVNYLLLTGPCATNLRLKID-GIVLADTRDMIQWSNITTWISIAR--------------- 114
Query: 142 YMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNY---SRPHLVEFI---SSENVVVSNLTF 195
+ D V G G IDGQG WW ++ +Y S L F+ SS N+ + +L F
Sbjct: 115 --VHDFSVEG-YGIIDGQGEEWWRISCRRNSSYVSDSSYRLYSFLTFDSSANITIQDLKF 171
Query: 196 LNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLK 255
+N+P ++ SNV I+ + + AP +SP T GI S+NV IE CII G D IS+
Sbjct: 172 VNSPQMHLAIEESSNVSIKGVEILAPHDSPNTDGIHLHMSNNVSIEKCIIGTGDDCISI- 230
Query: 256 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEMSGG-ISNVQVEKIHLYDSLNG 313
+ T++V IR ++ G S+ + G + +SNV+VE L + G
Sbjct: 231 ----------AKNTSNVVIREIICGPGHGISIGSLGRNKTPEFVSNVKVENSILESTKYG 280
Query: 314 IEFRTTKGRGGY-------------IRQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 360
+ +T +G G+ + Q +I D + N +F +CG+ + D
Sbjct: 281 LRIKTWQGGQGFASNFSYYNVVMMNVLQPIIIDQYYCDGNSSF----SCGTE-----ELD 331
Query: 361 ALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLSINPGSYNSWECSNIHG 419
A+ + +++ +I+GT+ ++A F P N+ L N+ L+++ GS S C N G
Sbjct: 332 AVK-VSNVSYSNIMGTSASSVALRFQCSLGNPCYNLVLENVFLNLSNGSTPSAFCLNAFG 390
Query: 420 SSES-VFPEPC 429
++ V P C
Sbjct: 391 QNKGLVVPNSC 401
>gi|325299708|ref|YP_004259625.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319261|gb|ADY37152.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 468
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 143/319 (44%), Gaps = 67/319 (21%)
Query: 73 KGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNP--------SHWDVVDPLPSY 124
+GG + VP G + TG L S++ L + +GAV+ S + + W+ +D ++
Sbjct: 78 EGGGTVLVPEGTFYTGPITLKSNVNLHVSEGAVLKFSTDQDLYFPAVITRWEGLDCYNAH 137
Query: 125 GRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSV--WW-----------DWFSSQS 171
LI Y ++ +TG G IDGQGS WW + SQ
Sbjct: 138 ------------PLIYAYGETNIALTG-KGVIDGQGSNENWWYMCGAPRYGWKEGMRSQK 184
Query: 172 LNYS------------------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVY 207
L RP L+ F S V++ ++T LN+P + IHP++
Sbjct: 185 LGSRERLMGYAELKRPIYERVMTPEDGLRPQLINFYSCNTVLIEDVTLLNSPFWVIHPLF 244
Query: 208 CSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR 267
C ++ ++ + + P G P+S NV IE+C G D I++KSG +E G +
Sbjct: 245 CESLIVRGVKIFN--RGPNGDGCDPESCKNVLIENCRFDTGDDCIAIKSGRNEDGRKWNI 302
Query: 268 PTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL----YDSLNGIEFRTTKGRG 323
P+ ++ +R +++ G V GSE+SGG N+ VE + D + I +T+ RG
Sbjct: 303 PSENIVVRNCEMKNGHG-GVVIGSEISGGYRNLYVEDCVMDSPQLDRV--IRIKTSTCRG 359
Query: 324 GYIRQIVISDAELYNINVA 342
G I + + + ++ N A
Sbjct: 360 GVIENVFVRNIKVGQCNEA 378
>gi|239628551|ref|ZP_04671582.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518697|gb|EEQ58563.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 710
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 155/343 (45%), Gaps = 55/343 (16%)
Query: 41 VSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 100
V +T++GAV D L+T A Q AI ++ + +GG + +P G++ TG+ L ++ L L
Sbjct: 37 VDVTDYGAVPDDGILDTKAIQAAIDHVSA---QGGGMVVIPRGRFDTGAIVLKENVNLHL 93
Query: 101 EKGAVILGSQN---PSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTID 157
E +L P ++ +V +Y G P + LI ++ VTG G +D
Sbjct: 94 ESEDTVLCFTRDIIPENYPLV---LAYYEG--APCYNWSPLIYANGQDNIAVTG-KGRLD 147
Query: 158 GQG--SVWWDWFSSQSL---------------------------------NYSRPHLVEF 182
GQ WW W+ + ++ RP+ ++
Sbjct: 148 GQADQDTWWSWYGDTYIGQDYTRPSSSDVGILRRMVDDGVDVRKRVFGEGHFLRPNFIQV 207
Query: 183 ISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIED 242
I ENV+V ++ N P + ++PV C+NV ++ I V + G P++ + V IED
Sbjct: 208 IGCENVLVEGISIKNPPMWGVNPVLCTNVTVRGIEVDGNFNN--NDGCNPENCNYVLIED 265
Query: 243 CIIAMGHDAISLKSGWDEYGIAY---GRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 299
C +G D +++KSG + G G ++ IR + S +AFGSEMSG I +
Sbjct: 266 CRFQVGGDGVAVKSGRNRDGWELKEAGWSARNMVIRGNEFAGGT-SGIAFGSEMSGDIRD 324
Query: 300 VQVEKIHL-YDSLN-GIEFRTTKGRGGYIRQIVISDAELYNIN 340
+ + SL+ I F++ RGG + +I I + NI
Sbjct: 325 IYADDNRFGTQSLDYAIRFKSNAARGGVVERIYIRGSRASNIR 367
>gi|325105247|ref|YP_004274901.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974095|gb|ADY53079.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 456
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 167/380 (43%), Gaps = 50/380 (13%)
Query: 1 MKMPVALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVS-----ITEFGAVGDGKTL 55
+K V L L+ E+S Q +Q P ++S IT+FGAVGD +
Sbjct: 7 LKFVVVCALFLSSSCNSFQKKELSREQKMNQILKTIIPPTISKNKLIITDFGAVGDSLSD 66
Query: 56 NTLAFQNAIFYLKSFADKGGAQLYVPSGKWL-TGSFNLTSHLTLFLEKGAVILGSQNPSH 114
+ AF I K ++ GA++ VP G +L G ++ ++++ ++KGA ++ S
Sbjct: 67 SKPAFDKVIQICK---EQNGARIIVPPGVYLLRGPIHMVDNMSIDIQKGAKLIFSNEAK- 122
Query: 115 WDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWD-WFSSQSL- 172
D + + + G L Y I Y +++V + G+ GTIDG ++ W Q
Sbjct: 123 -DYLPTVLTSWEGTFL--YNYSPFIYAYQVKNVAIIGE-GTIDGNAKDSFNLWHGKQKQS 178
Query: 173 ----------------------NYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSN 210
++ RP ++F +N+++ +T N+P + +H + N
Sbjct: 179 QELSRKMNHENVPIEKRQFGEGHFLRPQFIQFFECKNILIEGVTITNSPFWCVHFLKSEN 238
Query: 211 VHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTT 270
+ + + A ++ G P+ S NV IED D I++K+G D G G +
Sbjct: 239 ITARKVKFDAFNKN--NDGFDPEYSKNVLIEDIDFNNADDNIAIKAGRDYEGRRIGLTSE 296
Query: 271 DVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIRQI 329
++ IR + G V GSEMS G+ NV VE GI ++ RGG+IR I
Sbjct: 297 NIIIRNCRFKGLHG--VVIGSEMSAGVQNVFVENCTYGGYCKRGIYLKSNPDRGGFIRDI 354
Query: 330 VISDAELYNINVAFGACGNC 349
I+ NV FG +C
Sbjct: 355 YIN-------NVVFGEVEDC 367
>gi|372223082|ref|ZP_09501503.1| glycoside hydrolase [Mesoflavibacter zeaxanthinifaciens S86]
Length = 453
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 172/366 (46%), Gaps = 46/366 (12%)
Query: 5 VALLLLLALCSAILINGE---VSD---GQCDDQPTLDPRP-HSVSITEFGAVGDGKTLNT 57
+ L+ L AL SA+L G+ V+D + + TL P +SV + +FGA+ + +
Sbjct: 4 IVLMCLFALFSAVLALGQNRSVADSAIAKITKEITLPKIPENSVELHQFGALPNDAKDDR 63
Query: 58 LAFQNAIFYLKSFADKGGAQLYVPSGKW-LTGSFNLTSHLTLFLEKGAVILGSQNPSHWD 116
A A+ YLK + G +L + G + + G +L SH+ + L++GAV+ + P +
Sbjct: 64 KAIIKALNYLKK---RNGGKLIIGKGIYEINGPIHLPSHVNVHLQEGAVLRFAPKPELYL 120
Query: 117 VVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFS-------- 168
V G + Y LI ++ +TG G IDG+GS W F
Sbjct: 121 PVVFTSWEGTFL----YNYSPLIYAKNETNIAITGA-GVIDGEGSKVWSTFKAEEQADKL 175
Query: 169 -SQSLNYS---------------RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVH 212
S+ +N+ RPHL++FI +N+++ + F ++P + H + S +
Sbjct: 176 LSRKMNHEEQPIASRQFGKDSKLRPHLLQFIDCKNILIEGVHFEDSPFWTTHFLRSSEIT 235
Query: 213 IQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTD 271
I+ IS +A ++ GI + +NV IE+ D I++K+G D G A P+ +
Sbjct: 236 IRGISFNAHNKN--NDGIDLEYVNNVLIENVDFNNSDDNIAIKAGRDTEGRANSETPSQN 293
Query: 272 VHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIRQIV 330
+ IR + ++ GSEMS G+ NV V L G+ F+T RGGYI+ I
Sbjct: 294 IVIRNNRFKGL--HALVIGSEMSAGVKNVFVVDNMASGYLKRGVYFKTNSDRGGYIKSIY 351
Query: 331 ISDAEL 336
I EL
Sbjct: 352 IDQLEL 357
>gi|357130709|ref|XP_003566989.1| PREDICTED: polygalacturonase-like [Brachypodium distachyon]
Length = 424
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 180/404 (44%), Gaps = 50/404 (12%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSG-KWLTGSFNLT----SHL 96
++ +GA GDG+ +T A + S + G L +P G K+LT + S++
Sbjct: 50 NVLRYGAHGDGRHDDTKALEKTWAAACSSSHPG--ILLIPKGNKYLTKHVTFSGPCKSNI 107
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
L +E ++ Q S+W IE R + I +R + VTG GTI
Sbjct: 108 KLMIE--GTLVAPQKRSYW------------IEQTIRHW---ILFKAVRGLTVTG-GGTI 149
Query: 157 DGQGSVWWDWFSSQSLN-----YSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNV 211
DG G +WW +S +N P + F S N+ V+NL LN+ ++ CS+V
Sbjct: 150 DGNGKIWWQ--NSCKVNAELPCRQSPAALTFYSCTNLKVNNLELLNSQQIHMSVECCSDV 207
Query: 212 HIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTD 271
I +S+ AP SP T GI S +V + DC I G D +S++ G T +
Sbjct: 208 RISRLSITAPSTSPNTDGIHIAHSKDVKVRDCAIKTGDDCMSIEDG-----------TKN 256
Query: 272 VHIRRVLLQSSSGSSV-AFGSEMS-GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQI 329
+H++ ++ G S+ + G S ++N+ ++ + L+ + NG +T +G GY + I
Sbjct: 257 LHVKNIVCGPGHGISIGSLGDRNSEAEVANITIDGVRLHGTTNGARIKTWQGGRGYAKNI 316
Query: 330 VISDAELYNI-NVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI-AGNFTGI 387
V + + N+ N C S A+ + + FK+I GT+ + A
Sbjct: 317 VFQNIIMDNVWNPIIINQNYCDSATPCKKQQSAV-EVSNVLFKNIRGTSASREAIKLNCS 375
Query: 388 QEAPFANICLSNISLSINPGSYNSWE-CSNIHGSS-ESVFPEPC 429
P I L N+ L++ GS ++ C N +V P+PC
Sbjct: 376 PTVPCHGIALHNVRLTLKRGSGDAKSTCHNAQWRKLGTVMPQPC 419
>gi|319953995|ref|YP_004165262.1| glycoside hydrolase family protein [Cellulophaga algicola DSM
14237]
gi|319422655|gb|ADV49764.1| glycoside hydrolase family 28 [Cellulophaga algicola DSM 14237]
Length = 459
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 164/351 (46%), Gaps = 54/351 (15%)
Query: 5 VALLLLLALCSAILINGEVSDGQCDDQPTLDPRPHSVSITEFGAVGDGKTLNTLAFQNAI 64
+ALLLL A+ S L +P I FGA GD T+NT A Q AI
Sbjct: 14 IALLLLGAMVSFSL------------------KPKIYDIKNFGAKGDSITINTKAIQKAI 55
Query: 65 FYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSY 124
+ GG + + G + +G+ L ++TL ++K A +LGS NP + +D
Sbjct: 56 ---DKCSKNGGGIVVIKEGVYSSGTILLKDNVTLQIDKSAKLLGSANPQDYQSIDTF--- 109
Query: 125 GRGIELPGRRYKSLINGYM-LRDVVVTGDNGTIDGQGSVWWD---WFSSQSLNYS----- 175
++ G++ + + G M +++ ++G +G+IDG G+ + + ++L S
Sbjct: 110 ---VDATGQKRGTCLIGAMGAKNIGISG-SGSIDGNGTAFLPENLFIKKKALGISGEDRF 165
Query: 176 ---RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISV--HAPPESPYTVGI 230
RP L+ F+ S + + N+ A A+ H SN+ + N+S+ HA + GI
Sbjct: 166 GGNRPFLLRFVKSTQITLKNIHLREAAAWACHFFQSSNILVDNVSIYNHANQNND---GI 222
Query: 231 VPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFG 290
DSS ++ I++C I G DAI +KS PT +V + L+S G ++ FG
Sbjct: 223 DLDSSHDIIIKNCNINSGDDAICIKS-------TSPLPTYNVKVSNCTLKSDWG-AIKFG 274
Query: 291 SEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISDAELYNINV 341
+E G N+ + + D+ G + G I ++I + E+ ++++
Sbjct: 275 TESMGDFYNIDIRDCKIEDTKGG-GIKILSVDGANIHDVLIENIEMNHVDM 324
>gi|294674151|ref|YP_003574767.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
gi|294473505|gb|ADE82894.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
Length = 1596
Score = 107 bits (266), Expect = 2e-20, Method: Composition-based stats.
Identities = 105/438 (23%), Positives = 185/438 (42%), Gaps = 86/438 (19%)
Query: 43 ITEFGAVGDGKTLNTLA-----FQNAIFYLKSFADKGGAQLYVPSG-KWLTGSFNLTSHL 96
IT++GA KT NT A Q AI + KGG ++ +P+ K+LTG+ L S +
Sbjct: 48 ITQYGA----KTTNTAAKNQKAIQKAI---DLCSKKGGGRVVIPANQKFLTGAIQLKSSV 100
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTI 156
L +++GAV+ + P + +V+ + G+E + + +D+ +TG GTI
Sbjct: 101 NLEVQEGAVLEFAFQPELYPIVE---TSWEGLEC--FNLSPCVYAFKAKDIAITG-KGTI 154
Query: 157 DGQGS--VWWDWFSSQSLNYS--------------------------------------- 175
DG GS WW W + +
Sbjct: 155 DGGGSNDTWWPWNGNPRFGWKEGTISQRGGSRARLLKNGEDGVPMYNEKGERSPERVFTA 214
Query: 176 ----RPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIV 231
RP LV F E +++ ++T L +P + IHP++ +++ ++ + + + P G
Sbjct: 215 QDGLRPQLVSFNKCEGILLEDVTLLRSPFWVIHPLHSTDITVRRVKMIN--DGPNGDGCD 272
Query: 232 PDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGS 291
P+ D V IEDC G D I++KSG + G P+ ++ IR +++ G V GS
Sbjct: 273 PECCDRVLIEDCFFNTGDDCIAIKSGRNRDGRERNMPSKNIIIRNCEMKNGHG-GVVVGS 331
Query: 292 EMSGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIRQIVISDAELYNINVAFGACGN 348
E+SGG NV + DS + +T RGG I I + N+ G C
Sbjct: 332 EISGGCQNVYAHDC-VMDSPELERVLRIKTNSCRGGIIENINMR-------NITVGKCKE 383
Query: 349 CGSHPDDDFDPDAL------PAIDQITFKDIIGTNITIAGNFTGIQEAPFA-NICLSNIS 401
+ D++ + + P + + +++ G+ E F +I + N
Sbjct: 384 SVLKINLDYEHNEICCRGYYPIVRNVYMENVTSQQSQYGVQIIGLDEDTFVYDINVKNCH 443
Query: 402 LS-INPGSYNSWECSNIH 418
+ + G++ S + N++
Sbjct: 444 FNGVKSGNFMSGKTRNVN 461
>gi|256424483|ref|YP_003125136.1| G-D-S-L family lipolytic protein [Chitinophaga pinensis DSM 2588]
gi|256039391|gb|ACU62935.1| lipolytic protein G-D-S-L family [Chitinophaga pinensis DSM 2588]
Length = 727
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 198/474 (41%), Gaps = 82/474 (17%)
Query: 37 RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 96
R ++SI GA DG TLN+ AI ++ GG + +P+G WLTG + S++
Sbjct: 265 RRDTLSIVALGAKADGVTLNSKIINAAI---TKASENGGGVVMIPAGLWLTGPIVMKSNV 321
Query: 97 TLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGD---- 152
L+L A++ + + + +V+ L R ++ I+ ++ +TG
Sbjct: 322 NLYLAPNALLQFTTDFDQYPLVETTYE-----GLKAMRCQAPISAVNAENIAITGKGIID 376
Query: 153 ------------------------NGTIDGQ-GSVWWDWFSSQS---------------- 171
+G I+G+ W+ SQ
Sbjct: 377 GGGDAWRIVKKDKLTESQWKKLLASGGIEGEDKKTWYPSAKSQKGSHTKLAGVIESGKTA 436
Query: 172 ------LNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQNISVHAPPESP 225
++ RP+++ S + V++ +TF N+PA+ +HP+ ++ ++++ P +
Sbjct: 437 ADYNDIKDFLRPNMLSITSCKYVLLEGVTFQNSPAWCLHPLLTEHITLRDVYAKNPWYAQ 496
Query: 226 YTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGS 285
GI +S IE C +G D I +KSG DE G G T DV + + + G
Sbjct: 497 NGDGIDLESCRYARIEGCTFDVGDDGICIKSGRDEQGRKRGVATEDVIVNNCTVYHAHGG 556
Query: 286 SVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIRQIVISD-------AELYN 338
V GSEMSGG N+ V + G+ F+TT+GRGG + +I +++ AE
Sbjct: 557 FVV-GSEMSGGARNLFVSNCSFLGTDIGLRFKTTRGRGGIVEKIYVNNINMKDIPAEAIL 615
Query: 339 INVAFGACGNC--GSHPDDDFDPDALPAIDQI-TFKDIIGTNITIAGN-----FTGIQEA 390
+++ + A + + P D FKD +N+ G G+ E
Sbjct: 616 LDMYYMAKDPVPLSGEKREAVKVELFPVTDATPQFKDFHISNVVCHGAEKAIFIRGLPEM 675
Query: 391 PFANICLSNISLSINPGSYNSWEC---SNIHGSSESVFPEPCPELENSSSNSSS 441
P ++I L +I++ + + +C SNI S+ ++ E +L S S
Sbjct: 676 PISDIHLKDITIK----AKKAGDCIVGSNISMSNVTLITEDNGKLNVQDSKQVS 725
>gi|300789895|ref|YP_003770186.1| endopolygalacturonase [Amycolatopsis mediterranei U32]
gi|384153411|ref|YP_005536227.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|399541775|ref|YP_006554437.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|299799409|gb|ADJ49784.1| endopolygalacturonase [Amycolatopsis mediterranei U32]
gi|340531565|gb|AEK46770.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|398322545|gb|AFO81492.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
Length = 457
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 145/309 (46%), Gaps = 32/309 (10%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSG-KWLTGSFNLTSHLTLFLE 101
IT +GA DGKT NT A AI + GG + VP G +LTG+ L S++ L LE
Sbjct: 62 ITGYGAKNDGKTDNTAAIAKAI---DACVAAGGGHVIVPGGGSFLTGAIRLKSNVDLHLE 118
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGS 161
G+V+ S + + + V L Y GIE + +I Y +++ +TG +GT+D +
Sbjct: 119 AGSVLKFSGDAAKFPNV--LTRY-EGIEC--VNHSPMIYAYQEKNIGLTG-SGTLDAAAT 172
Query: 162 VWWDWFSSQSL--------------------NYSRPHLVEFISSENVVVSNLTFLNAPAY 201
W+ S ++ + R VE + ENV++ +T N+ +
Sbjct: 173 SSWNKGSDRAYLETLVAKGTPPEKRVVPGSGHTMRSAFVEPYACENVLIQGITLKNSMFW 232
Query: 202 NIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEY 261
+HP C NV + +S T G P+S D+V I +C + D I++KSG D
Sbjct: 233 QLHPTLCRNVTVDGVSTDPSTAHSNTDGCDPESCDHVVIANCTLGAHDDNIAIKSGRDAD 292
Query: 262 GIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLY-DSLNGIEFRTTK 320
G P ++ + ++ + G ++ GSE +GGI NV K+ + D+ + ++
Sbjct: 293 GRRVNVPCQNLVVVNCVMNGNWG-AITCGSEQTGGIRNVYAYKLTVKGDTKFALYVKSNT 351
Query: 321 GRGGYIRQI 329
RGG+ I
Sbjct: 352 LRGGFSENI 360
>gi|224536009|ref|ZP_03676548.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522376|gb|EEF91481.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
Length = 459
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 165/394 (41%), Gaps = 45/394 (11%)
Query: 42 SITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLE 101
S+ +FGAV G NT + AI + GG ++ +P G+WLTG +L S++ L+L
Sbjct: 52 SVVDFGAVKGGIADNTKSITAAI---NACHKAGGGRVVIPEGEWLTGPVHLKSNVNLYLS 108
Query: 102 KGAVILGSQNPSHWDVVDPLPSYGRGIE-LPGRRYKSLINGYMLRDVVVTGDNGTIDGQG 160
+ AV+ + NPS D LP+ E + Y L+ +V +TG G + +
Sbjct: 109 ENAVLCFTDNPS-----DYLPAVMTSWEGMECYNYSPLVYAVGCENVAITG-KGMLKPKM 162
Query: 161 SVWWDWFSSQSL---------------------------NYSRPHLVEFISSENVVVSNL 193
W WF+ N RPHL+ F NV++
Sbjct: 163 DTWKVWFARPEAHLNALKELYTMASTDVPVEKRQMAVGENNLRPHLIHFNRCRNVLLDGF 222
Query: 194 TFLNAPAYNIHPVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAIS 253
+P + IH C +N+ V A + GI + + N +EDC G DA+
Sbjct: 223 KIRESPFWTIHIYMCDGGIARNLDVKAHGHN--NDGIDLEMTRNFLVEDCTFDQGDDAVV 280
Query: 254 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNG 313
+K+G + PT ++ IR + + + GSE+SGGI NV + + S+
Sbjct: 281 IKAGRNRDAWRLNIPTENIVIRNCNIVEGH-TLLGIGSEISGGIRNVYMHDCKVPQSVRR 339
Query: 314 IEF-RTTKGRGGYIRQIVISDAELYNINVAFGACGNCGSHPDDDFDP---DALPAIDQIT 369
+ F +T RG ++ I + + ++ + + D P + + ID I
Sbjct: 340 LFFVKTNHRRGAFVENIHMENIRAGHVQRVLEIDTDV-LYQWKDLVPTYEERITRIDGIY 398
Query: 370 FKDIIGTNITIAGNFTGIQEAPFANICLSNISLS 403
K+++ T+ G + P N+ + ++ ++
Sbjct: 399 MKNVVCTSADAIYELKGDTKLPARNVVIEDVHVN 432
>gi|423301906|ref|ZP_17279929.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
gi|408470997|gb|EKJ89529.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
Length = 489
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 145/314 (46%), Gaps = 29/314 (9%)
Query: 36 PRPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSH 95
P+ + T+FG D L+T Q+AI + +KGG + +PSG + G+ + S
Sbjct: 50 PKSDCIHATDFGLKSDTSVLSTRFVQSAI---DACHEKGGGTVIIPSGVYRIGALFIKSG 106
Query: 96 LTLFLEKGAVILGSQNPSHWDVVD--PLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDN 153
+ L L KG ++ S+ D+ D PS GIE+ +++N + +TG+
Sbjct: 107 VNLHLSKGTTLIASE-----DIRDYPEFPSRIAGIEMTWP--SAVLNIMDAENAALTGE- 158
Query: 154 GTIDGQGSVWWDWFSSQSLNYSRPHLVEFI-------------SSENVVVSNLTFLNAPA 200
G ID +G V+WD + Y + L + +S+++ + + T +
Sbjct: 159 GFIDCRGKVFWDKYWEMRKEYEKKKLRWIVDYDCKRVRGILVSNSKHITLKDFTLVRTGF 218
Query: 201 YNIHPVYCSNVHIQNISVH--APPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGW 258
+ +Y + + ++++ P T GI DSS N+ +E+C + D I +K+G
Sbjct: 219 WACQILYSDHCSVDGVTINNNVGGHGPSTDGIDIDSSTNILVENCEVDCNDDNICIKAGR 278
Query: 259 DEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRT 318
D G+ RPT +V IR + +G V GSE SG I NV + Y + + ++
Sbjct: 279 DADGLRVNRPTENVVIRNCTARKGAG-LVTCGSETSGSIRNVLAYDLKAYGTGAALRLKS 337
Query: 319 TKGRGGYIRQIVIS 332
+ RGG + I ++
Sbjct: 338 SMNRGGTVENIYMT 351
>gi|449446684|ref|XP_004141101.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
gi|449489467|ref|XP_004158321.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 477
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 172/395 (43%), Gaps = 70/395 (17%)
Query: 43 ITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSG-KWLTGSFNLTS---HLTL 98
+ +FGA GDG+T +T AFQ+A +S + G+ + VPSG ++L G + + +
Sbjct: 87 VLDFGAKGDGETDDTKAFQSA---WESACNVEGSVVEVPSGSEFLVGPISFSGPNCQPNI 143
Query: 99 FLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDG 158
+ I+ +PS W G I L+ + V G GTIDG
Sbjct: 144 MFQLDGKIIAPTSPSAW----------------GSGMLQWIEFTKLKGITVKG-TGTIDG 186
Query: 159 QGSVWWD--------------WFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIH 204
QGSVWW+ S L ++P + F S+ V VS +T N+ ++
Sbjct: 187 QGSVWWNDSPTDNPTDKNLDKESSGGELPSTKPTALRFYGSDEVTVSGITIQNSQKAHLK 246
Query: 205 PVYCSNVHIQNISVHAPPESPYTVGIVPDSSDNVCIEDCIIAMGHDAISLKSGWDEYGIA 264
C+ V + ++++ +P +SP T GI +S NV I + IA G D IS+++G
Sbjct: 247 FDSCTAVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNIACGDDCISIQTG------- 299
Query: 265 YGRPTTDVHIRRVLLQSSSGSSV-AFGS-EMSGGISNVQVEKIHLYDSLNGIEFRTTKGR 322
++ V+I V G S+ G + +SNV V + L +++NG+ +T +G
Sbjct: 300 ----SSGVYIHNVNCGPGHGISIGGLGRDDTKACVSNVTVRDVKLQNTMNGVRIKTWQGG 355
Query: 323 GGYIRQIVISDAELYNINVAF---------GACGNCGSHPDDDFDPDALPAIDQITFKDI 373
G ++ I+ S+ ++ ++ G C N S AI + + +I
Sbjct: 356 SGLVQGILFSNIQVTDVQTPIMIDQYYCDGGRCHNGSS----------AVAISGVNYVNI 405
Query: 374 IGTNITIAGNFTGIQEAPFANICLSNISLSINPGS 408
GT + +F P + L I L + GS
Sbjct: 406 RGTYTSTPVHFACSDSLPCTGVTLDTIQLEGSSGS 440
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,729,792,315
Number of Sequences: 23463169
Number of extensions: 344888279
Number of successful extensions: 754566
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2145
Number of HSP's successfully gapped in prelim test: 1425
Number of HSP's that attempted gapping in prelim test: 745158
Number of HSP's gapped (non-prelim): 4742
length of query: 456
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 310
effective length of database: 8,933,572,693
effective search space: 2769407534830
effective search space used: 2769407534830
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)