BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012790
(456 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 207/403 (51%), Gaps = 30/403 (7%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGE-----------KWLKPEYRSSGRSMIHKKAKVEFHP 49
++ A G+ T E + W+ S G W + S G+S++ ++ P
Sbjct: 93 LLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSRE------P 146
Query: 50 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 109
+GVVGAIV+WN P N + A+ +G IV+K + + + A VG P
Sbjct: 147 VGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTA----NALAEVFAEVGLP 202
Query: 110 ENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 167
E ++ V+ G ETG+AL S+ +D F GS VGR + R A++ L P TLELGGK A I
Sbjct: 203 EGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAI 262
Query: 168 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 227
+ +DVD+ + V + + ++GQ C R R Y V+ V V ++ GPP
Sbjct: 263 ILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSD 322
Query: 228 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNVNH 286
+G L + +++ + +++GA ++ G EG + +F PTV +V++
Sbjct: 323 PAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGG---RPEGLDNGFFIQPTVFADVDN 379
Query: 287 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 346
M + QEE FGP++ I+ ++T+E+ + +ANDS YGL +V++ + +I+ QI+ G
Sbjct: 380 KMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTY 439
Query: 347 AINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
IN +A + PFGG K+SG GR G EG+ KSV+
Sbjct: 440 GINWYAFD---PGSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 187/354 (52%), Gaps = 13/354 (3%)
Query: 42 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 101
K+ V PLGVVG I WNYP + A+ +G V+K SE AS + C F +
Sbjct: 141 KSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELASVT-CLEFGEV-- 197
Query: 102 ALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 158
VG P +++++TG + G LVS VDKI F GS G +M +A++ + PVTL
Sbjct: 198 -CNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAAQLVKPVTL 256
Query: 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 218
ELGGK +V +DVD+ V + + ++GQ C+ R VH I A FV ++ K K
Sbjct: 257 ELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAEFVDKLVKWTK 316
Query: 219 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG-HLSEGAVDQYFP 277
++ P +G + +K+ ++ A +GA IL GS HL +G Y
Sbjct: 317 NIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHLKKG---YYIE 373
Query: 278 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 337
PT++ +++ +M++ +EE FGP++ + F++++E + LAND+ YGL AVFS R I
Sbjct: 374 PTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSNDLERCERI 433
Query: 338 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391
++ G +N S P+GG+K SGFGR G G++ +K V +D
Sbjct: 434 TKALEVGAVWVN--CSQPCFVQAPWGGIKRSGFGRELGEWGIQNYLNIKQVTQD 485
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 186/352 (52%), Gaps = 13/352 (3%)
Query: 42 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 101
K+ + P+GVV I WNYPF + A+ +G ++K SE AS + C I
Sbjct: 144 KSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKPSELASVT-CLELGEI-- 200
Query: 102 ALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 158
VG P +++++TG E G +L S VDKI F GS G IM A++ + PV+L
Sbjct: 201 -CKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSKIMTTAAQLVKPVSL 259
Query: 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 218
ELGGK +V +DVD+ VA+ V ++GQ C+ R VH I FV ++ K +
Sbjct: 260 ELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIVHESIAVEFVDKLVKWAE 319
Query: 219 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYFP 277
++ PL +G + +K+ N ++ A +GA IL G HL +G +
Sbjct: 320 NIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGRRPEHLKKG---YFVE 376
Query: 278 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 337
PT+I +V +M++ +EE FGP++ + F+T+EE + LAND+ YGLG AV S R +
Sbjct: 377 PTIITDVTTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGSAVMSNDLERCERL 436
Query: 338 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
+ +Q G+ IN +++ P+GG+K SGFGR G GL VK V
Sbjct: 437 SKALQAGIVWINCAQPSFI--QAPWGGIKRSGFGRELGEWGLENYLSVKQVT 486
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 187/353 (52%), Gaps = 13/353 (3%)
Query: 42 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 101
K + P+GVVG I WNYP + A+ +G V+K SE AS + C I
Sbjct: 161 KCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSELASVT-CLELADI-- 217
Query: 102 ALAAVGAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKTLTPVTL 158
VG P +++++TG A +S+ VDK+ F GS G+ IM +A+ + PVTL
Sbjct: 218 -CKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIMASAAPMVKPVTL 276
Query: 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 218
ELGGK +V DDVD+ + + ++GQ C+ R +H I F ++ K
Sbjct: 277 ELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIHTKIAKKFNERMVAWAK 336
Query: 219 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG-SFGHLSEGAVDQYFP 277
++ PL +G + EK++ +++A +GA IL G HL +G +
Sbjct: 337 NIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAHLEKGF---FIE 393
Query: 278 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 337
PT+I ++ +M++ +EE FGP++ + +F+T++E ++LAND++YGL AV SG + R + +
Sbjct: 394 PTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRL 453
Query: 338 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390
+ +I G +N + CQ+ P+GG K SGFGR G G+ VK V E
Sbjct: 454 SEEIDAGCIWVN-CSQPCFCQA-PWGGNKRSGFGRELGEGGIDNYLSVKQVTE 504
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/353 (34%), Positives = 184/353 (52%), Gaps = 13/353 (3%)
Query: 42 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 101
K+ V P+GVVG I WNYP + A+ +G ++K SE AS + C I
Sbjct: 144 KSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLT-CLELGEI-- 200
Query: 102 ALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 158
VG P +++++TG E G L + VDK+ F GS G IM A++ + PV+L
Sbjct: 201 -CKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSL 259
Query: 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 218
ELGGK +V +DVD+ A+ A+ ++GQ C+ R +H I F++++ K +K
Sbjct: 260 ELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIK 319
Query: 219 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG-HLSEGAVDQYFP 277
++ PL +G + EK+ V++A +GA IL GS HL +G +
Sbjct: 320 NIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGF---FIE 376
Query: 278 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 337
PT+I +V M++ +EE FGP++ + F+T+EE + LAND+ YGLG AV S R +
Sbjct: 377 PTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERV 436
Query: 338 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390
+ G+ +N S P+GGVK SGFGR G GL VK V +
Sbjct: 437 TKAFKAGIVWVN--CSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQ 487
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 172/332 (51%), Gaps = 10/332 (3%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
PLGV I++WNYPF A+ GN +V K S +G I A G
Sbjct: 154 EPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEA----G 209
Query: 108 APENLVDVITGFAETGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165
P LV+V+ G AETG L +V K+ F GS G+ +M ++KT+ VTLELGGK
Sbjct: 210 VPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSP 269
Query: 166 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 225
++ D ++ + + A+ A + GQ C R +V R+I F+ +V K K++ G P
Sbjct: 270 LLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDP 329
Query: 226 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVN 283
L + MG L +K+ V A +GA +L G S+ + + P V+ N
Sbjct: 330 LLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDN 389
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 343
M ++EE FGP+M ++ F+T+EEV++ AN++ +GL VF+ RA +AA ++
Sbjct: 390 CRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEA 449
Query: 344 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
G IN ++ + + +PFGG K SGFGR G
Sbjct: 450 GTCYINTYSISPV--EVPFGGYKMSGFGRENG 479
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 197/388 (50%), Gaps = 26/388 (6%)
Query: 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM----IHKKAKVEFHPLGVVGAIVSWNYP 62
GEI I W EG+ R +G ++ +K+ V P+GV AI WN+P
Sbjct: 109 GEIAYAASFIEWFAEEGK-------RVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFP 161
Query: 63 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 122
I + A+ +G IV+K +E+ +S + + A G P+ ++ V+ G +
Sbjct: 162 AAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERA----GVPKGVLSVVIGDPKA 217
Query: 123 -GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ 179
G + S+ V K+ F GS VGR++M ++ T+ +TLELGG FIV DD D+ +
Sbjct: 218 IGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVE 277
Query: 180 IAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 239
A+ + +++GQ C RF+VH +Y F ++A V + G +G L
Sbjct: 278 GAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEA 337
Query: 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 299
+K+++ + DAL KGA ++ G L G +F PTV+ V M + +EE FGP+
Sbjct: 338 AVKKVESHIADALAKGASLMTGGKRHALGHG----FFEPTVLTGVKPDMDVAKEETFGPL 393
Query: 300 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQ 358
P+ +F ++EE+V+LAND+ +GL ++S R +A ++ G+ IN SN +
Sbjct: 394 APLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVA- 452
Query: 359 SLPFGGVKDSGFGRFAGVEGLRACCLVK 386
PFGGVK SG GR G+ ++K
Sbjct: 453 --PFGGVKQSGLGREGSHYGIDDYVVIK 478
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 182/354 (51%), Gaps = 14/354 (3%)
Query: 42 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 101
K+ V PLGVVG I WNYP + A+ +G ++K SE AS + C I
Sbjct: 157 KSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASIT-CLELGEI-- 213
Query: 102 ALAAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTL 158
+G P ++++TG E G L S VDKI F GS G IM A++ + PV+L
Sbjct: 214 -CREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSL 272
Query: 159 ELGGKDAFIVCDDVDVPHVA-QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 217
ELGGK +V DD+D +A + + ++GQ C+ R V +I + F+ ++ K
Sbjct: 273 ELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENIASAFMDRLLKWT 332
Query: 218 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYF 276
K++ PL +G + EK+ +++A +GA IL G HL +G Y
Sbjct: 333 KNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKG---YYV 389
Query: 277 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 336
PT+I +VN +M++ +EE FGP++ + F T+E+ ++LAND++YGLG AV S R
Sbjct: 390 QPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCER 449
Query: 337 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390
Q G+ IN S LP+GG K SGFGR G GL +K V E
Sbjct: 450 FTKAFQTGIIWIN--CSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQVTE 501
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 181/351 (51%), Gaps = 9/351 (2%)
Query: 42 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 101
++K+ P+GVV I WNYP + A+ +G +V+K SE + F +++
Sbjct: 163 ESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEE 222
Query: 102 ALAAVGAPENLVDVITGF-AETGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTL 158
VG P+ +++I G +E G+ + VD + F G G+ IM+NA+ +T + L
Sbjct: 223 ----VGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIAL 278
Query: 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 218
ELGGK+ I+ DD D A+ +GQ C+ R V I F + VK
Sbjct: 279 ELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVK 338
Query: 219 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPP 278
+ G +MG + EH K+++ ++ A +GA I G + +F P
Sbjct: 339 KIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEP 398
Query: 279 TVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIA 338
TVI N + +M+++QEE FGP++ + F T++E ++LANDS YGL AVFS +A+ +A
Sbjct: 399 TVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVA 458
Query: 339 AQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
+++ G INDF Y Q+ P+GG K SG GR G EGL + K ++
Sbjct: 459 NKLKLGTVWINDFHP-YFAQA-PWGGYKQSGIGRELGKEGLEEYLVSKHIL 507
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 184 bits (467), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 181/354 (51%), Gaps = 14/354 (3%)
Query: 42 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 101
K+ V PLGVVG I WNYP + A+ +G ++K SE AS + C I
Sbjct: 157 KSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASIT-CLELGEI-- 213
Query: 102 ALAAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTL 158
+G P ++++TG E G L S VDKI F GS G IM A++ + PV+L
Sbjct: 214 -CREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSL 272
Query: 159 ELGGKDAFIVCDDVD-VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 217
LGGK +V DD+D + A+ + ++GQ C+ R V +I + F+ ++ K
Sbjct: 273 ALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENIASAFMDRLLKWT 332
Query: 218 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYF 276
K++ PL +G + EK+ +++A +GA IL G HL +G Y
Sbjct: 333 KNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKG---YYV 389
Query: 277 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 336
PT+I +VN +M++ +EE FGP++ + F T+E+ ++LAND++YGLG AV S R
Sbjct: 390 QPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCER 449
Query: 337 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390
Q G+ IN S LP+GG K SGFGR G GL +K V E
Sbjct: 450 FTKAFQTGIIWIN--CSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQVTE 501
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 179/348 (51%), Gaps = 18/348 (5%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 212
Query: 108 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 163
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTL+LGGK
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLQLGGK 272
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ + A A + GQ+C+ R +V DIY FV + KS G
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 281
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVF 386
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +
Sbjct: 387 GDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQAL 446
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
Q G +N + + QS PFGG K SG GR G GL+A VK+V
Sbjct: 447 QAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 177/348 (50%), Gaps = 18/348 (5%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 212
Query: 108 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 163
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ + A A + GQ C R +V DIY FV + KS G
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 281
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVF 386
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +
Sbjct: 387 GDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQAL 446
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
Q G +N + + QS PFGG K SG GR G GL+A VK+V
Sbjct: 447 QAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 181 bits (458), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 177/348 (50%), Gaps = 18/348 (5%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 212
Query: 108 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 163
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ + A A + GQ C R +V DIY FV + KS G
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 281
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVF 386
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +
Sbjct: 387 GDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQAL 446
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
Q G +N + + QS PFGG K SG GR G GL+A VK+V
Sbjct: 447 QAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 177/348 (50%), Gaps = 18/348 (5%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 151 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 206
Query: 108 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 163
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 207 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 266
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ + A A + GQ C R +V DIY FV + KS G
Sbjct: 267 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 326
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 281
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 327 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVF 380
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +
Sbjct: 381 GDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQAL 440
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
Q G +N + + QS PFGG K SG GR G GL+A VK+V
Sbjct: 441 QAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVT 486
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 177/348 (50%), Gaps = 18/348 (5%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 212
Query: 108 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 163
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ + A A + GQ C R +V DIY FV + KS G
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 281
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVF 386
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +
Sbjct: 387 GDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQAL 446
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
Q G +N + + QS PFGG K SG G+ G GL+A VK+V
Sbjct: 447 QAGTVWVNCY-DVFGAQS-PFGGYKMSGSGQELGEYGLQAYTEVKTVT 492
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 181/349 (51%), Gaps = 20/349 (5%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 212
Query: 108 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 163
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQ-NCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
I+ D D+ + A A + GQ +CAG+ R +V DIY FV + KS
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGS-RTFVQEDIYDEFVERSVARAKSRVV 331
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTV 280
G P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 332 GNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTV 385
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++
Sbjct: 386 FGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQA 445
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
+Q G +N + + QS PFGG K SG GR G GL+A VK+V
Sbjct: 446 LQAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 180/349 (51%), Gaps = 20/349 (5%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 212
Query: 108 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 163
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQ-NCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
I+ D D+ + A A + GQ CAG+ R +V DIY FV + KS
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGS-RTFVQEDIYDEFVERSVARAKSRVV 331
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTV 280
G P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 332 GNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTV 385
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++
Sbjct: 386 FGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQA 445
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
+Q G +N + + QS PFGG K SG GR G GL+A VK+V
Sbjct: 446 LQAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/340 (35%), Positives = 173/340 (50%), Gaps = 18/340 (5%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 212
Query: 108 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 163
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ + A A + GQ C R +V DIY FV + KS G
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 281
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVF 386
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +
Sbjct: 387 GDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQAL 446
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 381
Q G +N + + QS PFGG K SG GR G GL+A
Sbjct: 447 QAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQA 484
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 178/348 (51%), Gaps = 18/348 (5%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 156 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 211
Query: 108 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 163
P +V+VI GF T A ++S VDK+ F GS VG +I A K+ L VTLE+GGK
Sbjct: 212 FPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLEIGGK 271
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ + A A + GQ C R +V DIYA FV + KS G
Sbjct: 272 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVG 331
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 281
P + + G +K+ + ++G ++L G A D+ + PTV
Sbjct: 332 NPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGG------AAADRGYFIQPTVF 385
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
++ M + +EE FGP+M I+KF + EEVV AN+S+YGL AVF+ +A ++ +
Sbjct: 386 GDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDKANYLSQAL 445
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
Q G +N + + QS PFGG K SG GR G GL+A VK+V
Sbjct: 446 QAGTVWVNCY-DVFGAQS-PFGGYKLSGSGRELGEYGLQAYTEVKTVT 491
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/358 (33%), Positives = 186/358 (51%), Gaps = 24/358 (6%)
Query: 40 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 99
+++A + + +GVVG I WN+P + + ++ A+ +G +V+K SE A S + I+
Sbjct: 152 NEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEIL 211
Query: 100 -QAALAAVGAPENLVDVITG-FAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTP 155
+AAL P + ++I G A G L + D I F GS G+ I +NAS TL
Sbjct: 212 DEAAL-----PSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKR 266
Query: 156 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 215
V LELGGK A I+ D D+ + Q VR +SGQ+C R V + IY +
Sbjct: 267 VCLELGGKGANIIFADADIDAL-QRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKD 325
Query: 216 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 275
I + GP +G + E +K+Q+L+ +D+GA ++ G+ L G Y
Sbjct: 326 IAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGT--GLPMGMERGY 383
Query: 276 F-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 334
+ PTV +V M++ +EE FGP++ ++ FNT++E V LAND+ YGL + S + +
Sbjct: 384 YVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKC 443
Query: 335 REIAAQIQCGVAAINDFASNYMCQSLP----FGGVKDSGFGRFAGVEGLRACCLVKSV 388
R IAAQ++ G+ +N LP FGGVK SG R G+ G++ K++
Sbjct: 444 RRIAAQVRSGMVEVNG-------HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/346 (32%), Positives = 174/346 (50%), Gaps = 14/346 (4%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G I+ WN+P + A+ GN +VIK +E S + +I+ A G
Sbjct: 156 EPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEA----G 211
Query: 108 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 163
P +V+++ G+ T A ++S +DKI F GS VG++I A ++ L VTLELGGK
Sbjct: 212 FPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGK 271
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ + + A + + GQ C R +V IY FV + + K G
Sbjct: 272 SPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVG 331
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 283
P + G + K+ L+ + +GA++ G G + PTV N
Sbjct: 332 SPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGK----GLGRKGFFIEPTVFSN 387
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 343
V M++ +EE FGP+ I++F T +EV++ AN+S +GL AVF+ ++A +++ +Q
Sbjct: 388 VTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQA 447
Query: 344 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
G IN + N + PFGG K SG GR G GLR VK+V
Sbjct: 448 GTVWINCY--NALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVT 491
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 184/395 (46%), Gaps = 22/395 (5%)
Query: 3 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 62
+A E++ E+I +++ + +W E + + PLGVV I +WNYP
Sbjct: 74 NAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYP 133
Query: 63 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG-FAE 121
F+ PM+ A+ +GN +V+K SE + II L ++L VI G E
Sbjct: 134 FNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLD-----KDLYPVINGGVPE 188
Query: 122 TGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 181
T E L D I++ GS GVG++IM A+K LTPVTLELGGK V + D+ +
Sbjct: 189 TTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRI 248
Query: 182 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241
+SGQ C + I V ++ K +K G D G + H
Sbjct: 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFY-GEDAKKSRDYGRIISARHF 307
Query: 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 301
+++ L+ + +A G G A +Y PT++ +V+ +MQEE FGP++P
Sbjct: 308 QRVMGLIE------GQKVAYGGTGD----AATRYIAPTILTDVDPQSPVMQEEIFGPVLP 357
Query: 302 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLP 361
I+ + EE ++ N L +FS + +++ A+ G A ND + SLP
Sbjct: 358 IVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLP 417
Query: 362 FGGVKDSGFGRFAGVEGL-----RACCLVKSVVED 391
FGGV +SG G + G + R CLV+ ++ D
Sbjct: 418 FGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMND 452
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 177/341 (51%), Gaps = 20/341 (5%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 212
Query: 108 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 163
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQ-NCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
I+ D D+ + A A + GQ +CAG+ R +V DIY FV + KS
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGS-RTFVQEDIYDEFVERSVARAKSRVV 331
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTV 280
G P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 332 GNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTV 385
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++
Sbjct: 386 FGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQA 445
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 381
+Q G +N + + QS PFGG K SG GR G GL+A
Sbjct: 446 LQAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQA 484
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 191/406 (47%), Gaps = 26/406 (6%)
Query: 8 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 67
E+ E++ + E W + E + R + PLGVV I +WNYPF+
Sbjct: 62 EVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTI 121
Query: 68 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG-FAETGEAL 126
PM+ AV +GN +++K SE + + + A L +NL V+ G ET E L
Sbjct: 122 QPMVGAVAAGNAVILKPSEVSG-----HMADLLATLIPQYMDQNLYLVVKGGVPETTELL 176
Query: 127 VSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL 186
D I++ GS VG+++M A+K LTPVTLELGGK V D D+ +
Sbjct: 177 KERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 236
Query: 187 QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 246
+SGQ C + I V ++ K +K G D G + H ++++
Sbjct: 237 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKG 295
Query: 247 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 306
L+++ ++ G++ S +Y PT++V+V+ +MQEE FGP+MPI+
Sbjct: 296 LIDNQ-----KVAHGGTWDQSS-----RYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVR 345
Query: 307 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVK 366
+ EE ++ N L VFS ++ +++ A+ G ND + +LPFGGV
Sbjct: 346 SLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVG 405
Query: 367 DSGFGRFAGVEGL-----RACCLVKSVVEDR----WWPYIKTKIPK 403
+SG G + G + R CLVKS++ + +P K+P+
Sbjct: 406 NSGMGAYHGKKSFETFSHRRSCLVKSLLNEEAHKARYPPSPAKMPR 451
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 170/346 (49%), Gaps = 14/346 (4%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G I+ WN+P + A+ GN +V+K +E + +I+ A G
Sbjct: 158 EPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEA----G 213
Query: 108 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 163
P +V+++ G+ T A +SS VDK+ F GS VG++I A K+ L V+LELGGK
Sbjct: 214 FPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGK 273
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
IV D D+ + + A + GQ C A R +V IY FV + + K G
Sbjct: 274 SPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLG 333
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 283
PL G E EK+ +L+ +GA++ G G + PTV +
Sbjct: 334 NPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG----PWGNKGYFIQPTVFSD 389
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 343
V M++ +EE FGP+ IMKF + ++V+K AN++ YGL +F+ +A +++ +Q
Sbjct: 390 VTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQS 449
Query: 344 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
G +N ++ + PFGG K SG GR G G VK+V
Sbjct: 450 GTVWVNCYS--VVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVT 493
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 170/347 (48%), Gaps = 14/347 (4%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
PLGVV I +WNYP A+ +GN ++ K SE + I A G
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA----G 195
Query: 108 APENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 163
P+ + +V+TG E G+ L ++KI F G G+ +M +AS + L VT+ELGGK
Sbjct: 196 VPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGK 255
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ A IAV A SSGQ C R ++HR A F ++V + V+ + G
Sbjct: 256 SPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLG 315
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 281
P + G L H E + + + A +L G +++GA + Y PTV
Sbjct: 316 DPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGE--RVTDGAFGKGAYVAPTVF 373
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+ M +++EE FGP+M I+ ++ ++E ++ AND+ YGL V + RA ++
Sbjct: 374 TDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRL 433
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
+ G+ IN + + +P GG K SG GR G+ L +KSV
Sbjct: 434 EAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 170/347 (48%), Gaps = 14/347 (4%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
PLGVV I +WNYP A+ +GN ++ K SE + I A G
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA----G 196
Query: 108 APENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 163
P+ + +V+TG E G+ L ++KI F G G+ +M +AS + L VT+ELGGK
Sbjct: 197 VPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGK 256
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ A IAV A SSGQ C R ++HR A F ++V + V+ + G
Sbjct: 257 SPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLG 316
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 281
P + G L H E + + + A +L G +++GA + Y PTV
Sbjct: 317 DPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGE--RVTDGAFGKGAYVAPTVF 374
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+ M +++EE FGP+M I+ ++ ++E ++ AND+ YGL V + RA ++
Sbjct: 375 TDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRL 434
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
+ G+ IN + + +P GG K SG GR G+ L +KSV
Sbjct: 435 EAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 178/335 (53%), Gaps = 16/335 (4%)
Query: 50 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 109
LGV I+ WN+PF I M A+ +GN IVIK SE + + +I+ +G P
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLP 198
Query: 110 ENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 166
+ +++ G ET G+ L + V + GS G IM A+K +T V LELGGK
Sbjct: 199 RGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVXLELGGKAPA 258
Query: 167 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 226
IV DD D+ + V + + +SGQ C AER YV + IY FV+++ + +++V G P
Sbjct: 259 IVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP- 317
Query: 227 AGKYD--MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 284
A + D MG L E+++ V A+++GA + +FG + Y+PPT++++V
Sbjct: 318 AERNDIAMGPLINAAALERVEQKVARAVEEGARV----AFGGKAVEGKGYYYPPTLLLDV 373
Query: 285 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 344
M +M EE FGP++P++ F+T E+ + +ANDS YGL ++++ + + A + ++ G
Sbjct: 374 RQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFG 433
Query: 345 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
IN N+ G + SG G G GL
Sbjct: 434 ETYINR--ENFEAMQGFHAGWRKSGIGGADGKHGL 466
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 186/373 (49%), Gaps = 24/373 (6%)
Query: 7 GEIMTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF 63
GEI I W EG++ P +++ R ++ K+ P+GV AI WN+P
Sbjct: 106 GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQ------PIGVTAAITPWNFPA 159
Query: 64 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ET 122
I A+ +G +V+K + +S + + A+ A G P + +V+TG A
Sbjct: 160 AMITRKAGPALAAGCTMVLKPASQTPFSA---LALAELAIRA-GVPAGVFNVVTGSAGAV 215
Query: 123 GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
G L S+ V K+ F GS +GR +M +K + V+LELGG FIV DD D+ +
Sbjct: 216 GNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEG 275
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
A+ + +++GQ C A R YV +Y F ++ + + + G L +G L +
Sbjct: 276 ALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKA 335
Query: 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 300
K++ + DAL+KGA ++ G H G +F PT++V+V K+ +EE FGP+
Sbjct: 336 VAKVEEHIADALEKGARVVCGGK-AHERGG---NFFQPTILVDVPANAKVSKEETFGPLA 391
Query: 301 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQS 359
P+ +F + +V+ AND+ +GL ++ R + ++ G+ IN SN +
Sbjct: 392 PLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVA-- 449
Query: 360 LPFGGVKDSGFGR 372
PFGG+K SG GR
Sbjct: 450 -PFGGIKASGLGR 461
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 178/335 (53%), Gaps = 16/335 (4%)
Query: 50 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 109
LGV I+ WN+PF I M A+ +GN IVIK SE + + +I+ +G P
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLP 198
Query: 110 ENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 166
+ +++ G ET G+ L + V + GS G IM A+K +T V LELGGK
Sbjct: 199 RGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPA 258
Query: 167 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 226
IV DD D+ + V + + +SGQ C AER YV + IY FV+++ + +++V G P
Sbjct: 259 IVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP- 317
Query: 227 AGKYD--MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 284
A + D MG L E+++ V A+++GA + +FG + Y+PPT++++V
Sbjct: 318 AERNDIAMGPLINAAALERVEQKVARAVEEGARV----AFGGKAVEGKGYYYPPTLLLDV 373
Query: 285 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 344
M +M EE FGP++P++ F+T E+ + +ANDS YGL ++++ + + A + ++ G
Sbjct: 374 RQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFG 433
Query: 345 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
IN N+ G + SG G G GL
Sbjct: 434 ETYINR--ENFEAMQGFHAGWRKSGIGGADGKHGL 466
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 186/373 (49%), Gaps = 24/373 (6%)
Query: 7 GEIMTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF 63
GEI I W EG++ P +++ R ++ K+ P+GV AI WN+P
Sbjct: 106 GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQ------PIGVTAAITPWNFPA 159
Query: 64 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ET 122
I A+ +G +V+K + +S + + A+ A G P + +V+TG A
Sbjct: 160 AMITRKAGPALAAGCTMVLKPASQTPFSA---LALAELAIRA-GVPAGVFNVVTGSAGAV 215
Query: 123 GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
G L S+ V K+ F GS +GR +M +K + V+LELGG FIV DD D+ +
Sbjct: 216 GNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEG 275
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
A+ + +++GQ C A R YV +Y F ++ + + + G L +G L +
Sbjct: 276 ALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKA 335
Query: 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 300
K++ + DAL+KGA ++ G H G +F PT++V+V K+ +EE FGP+
Sbjct: 336 VAKVEEHIADALEKGARVVCGGK-AHERGG---NFFQPTILVDVPANAKVSKEETFGPLA 391
Query: 301 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQS 359
P+ +F + +V+ AND+ +GL ++ R + ++ G+ IN SN +
Sbjct: 392 PLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVA-- 449
Query: 360 LPFGGVKDSGFGR 372
PFGG+K SG GR
Sbjct: 450 -PFGGIKASGLGR 461
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 179/335 (53%), Gaps = 16/335 (4%)
Query: 50 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 109
LGV I+ WN+PF I M A+ +GN IVIK SE + + +I+ +G P
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLP 198
Query: 110 ENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 166
+ +++ G ET G+ L + V + GS G IM A+K +T V LELGGK
Sbjct: 199 RGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPA 258
Query: 167 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 226
IV DD D+ + V + + +SGQ C AER YV + IY FV+++ + +++V G P
Sbjct: 259 IVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP- 317
Query: 227 AGKYD--MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 284
A + D MG L E+++ V A+++GA + A G G EG Y+PPT++++V
Sbjct: 318 AERNDIAMGPLINAAALERVEQKVARAVEEGARV-ALG--GKAVEGK-GYYYPPTLLLDV 373
Query: 285 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 344
M +M EE FGP++P++ F+T EE + +ANDS YGL ++++ + + A + ++ G
Sbjct: 374 RQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFG 433
Query: 345 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
IN N+ G + SG G G GL
Sbjct: 434 ETYINR--ENFEAMQGFHAGWRKSGIGGADGKHGL 466
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 169/347 (48%), Gaps = 14/347 (4%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
PLGVV I +WNYP A+ +GN ++ K SE + I A G
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA----G 195
Query: 108 APENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 163
P+ + +V+TG E G+ L ++KI F G G+ +M +AS + L VT+ LGGK
Sbjct: 196 VPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMALGGK 255
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ A IAV A SSGQ C R ++HR A F ++V + V+ + G
Sbjct: 256 SPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLG 315
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 281
P + G L H E + + + A +L G +++GA + Y PTV
Sbjct: 316 DPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGE--RVTDGAFGKGAYVAPTVF 373
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+ M +++EE FGP+M I+ ++ ++E ++ AND+ YGL V + RA ++
Sbjct: 374 TDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRL 433
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
+ G+ IN + + +P GG K SG GR G+ L +KSV
Sbjct: 434 EAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 169/347 (48%), Gaps = 14/347 (4%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
PLGVV I +WNYP A+ +GN ++ K SE + I A G
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA----G 196
Query: 108 APENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 163
P+ + +V+TG E G+ L ++KI F G G+ +M +AS + L VT+ELGGK
Sbjct: 197 VPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGK 256
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ A IAV A SSGQ R ++HR A F ++V + V+ + G
Sbjct: 257 SPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQARFEAKVLERVQRIRLG 316
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 281
P + G L H E + + + A +L G +++GA + Y PTV
Sbjct: 317 DPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGE--RVTDGAFGKGAYVAPTVF 374
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+ M +++EE FGP+M I+ ++ ++E ++ AND+ YGL V + RA ++
Sbjct: 375 TDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRL 434
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
+ G+ IN + + +P GG K SG GR G+ L +KSV
Sbjct: 435 EAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 169/347 (48%), Gaps = 14/347 (4%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
PLGVV I +WNYP A+ +GN ++ K SE + I A G
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA----G 196
Query: 108 APENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 163
P+ + +V+TG E G+ L ++KI F G G+ +M +AS + L VT+ELGGK
Sbjct: 197 VPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGK 256
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ A IAV A SSGQ R ++HR A F ++V + V+ + G
Sbjct: 257 SPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQQARFEAKVLERVQRIRLG 316
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 281
P + G L H E + + + A +L G +++GA + Y PTV
Sbjct: 317 DPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGE--RVTDGAFGKGAYVAPTVF 374
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+ M +++EE FGP+M I+ ++ ++E ++ AND+ YGL V + RA ++
Sbjct: 375 TDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRL 434
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
+ G+ IN + + +P GG K SG GR G+ L +KSV
Sbjct: 435 EAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 167/343 (48%), Gaps = 13/343 (3%)
Query: 50 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 109
+GV G I WN+P + + AA +G+ +V+K SE ++ I+ VG P
Sbjct: 140 IGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAV----ILAEIFDKVGVP 195
Query: 110 ENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 166
+ + +++ G A G L V F GS G I A+K V+LELGGK +
Sbjct: 196 KGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAAKDFKKVSLELGGKSPY 255
Query: 167 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 226
IV DDVD+ A+ + ++GQ C R V I F++++ + V G P
Sbjct: 256 IVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPR 315
Query: 227 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP-PTVIVNVN 285
+G + + +++QN +N +++GAE+ G EG YF PT+ +NV+
Sbjct: 316 EDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGP--GKPEGLEKGYFARPTIFINVD 373
Query: 286 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 345
+ + QEE FGP+ ++ +N +E +++AND++YGL V + ++A I+ G
Sbjct: 374 NQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGT 433
Query: 346 AAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
IN+ LPFGG K SG GR G G+ VKS+
Sbjct: 434 VEINEAGRK---PDLPFGGYKQSGLGREWGDYGIEEFLEVKSI 473
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 181/403 (44%), Gaps = 25/403 (6%)
Query: 7 GEIMTTCEKITWLLSEGEKW--LKPEY---RSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 61
G + T +I L+ ++W L PE + S+ + P +VG I WN+
Sbjct: 79 GRLSITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNF 138
Query: 62 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV---ITG 118
P + A+ +G +V+K SE A R + L A+ L DV + G
Sbjct: 139 PLTLSXIDTIPALLAGCAVVVKPSEIAP-------RFVAPLLXALNTVPELRDVLIFVEG 191
Query: 119 FAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVA 178
ETG L++ VD + F GS GR + A++ P LELGGKD IV + ++
Sbjct: 192 GGETGANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLELAT 251
Query: 179 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 238
+ A+ ++GQ+C ER YV + F Q+ + PL +G +
Sbjct: 252 SAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAE 311
Query: 239 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 298
+ + + + + DA++KGA I G L G + PTV NVNH+ K+ EE FGP
Sbjct: 312 KQAGIINDHILDAVEKGAVIHCGGKVEELGGG---WWCRPTVXTNVNHSXKVXTEETFGP 368
Query: 299 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQ 358
I P+ F EE V LAND+ YGL AVF+GS+ A ++A Q+ G +IND A
Sbjct: 369 IXPVXPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAXXH 428
Query: 359 SLPFGGVKDSGF-GRFAGVEGLR------ACCLVKSVVEDRWW 394
SG G G GL+ A + + D WW
Sbjct: 429 EGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWW 471
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 170/346 (49%), Gaps = 14/346 (4%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G I WN P + + A+ GN +++K +E + +I+ A G
Sbjct: 158 EPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEA----G 213
Query: 108 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 163
P +V+++ G+ T A +SS VDK+ F GS VG+MI A+K+ L VTLELG K
Sbjct: 214 FPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAK 273
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
+ IV D D+ + A + + GQ+C A + +V IY FV + + K G
Sbjct: 274 NPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFG 333
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 283
PL + G K+ L+ +GA++ G G + PTV N
Sbjct: 334 NPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGG----PWGNKGYFIQPTVFSN 389
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 343
V M++ +EE FGP+ IMKF + +EV+K AN++ YGL VF+ +A +++ +Q
Sbjct: 390 VTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQA 449
Query: 344 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
G +N + + QS P GG K SG GR G G+ VK+V
Sbjct: 450 GTVWVNCYLAA-SAQS-PAGGFKMSGHGREMGEYGIHEYTEVKTVT 493
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 188/388 (48%), Gaps = 28/388 (7%)
Query: 4 ASLGEIMTTCEKITWLLSEGEKW----LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 59
+++GE+ T + I E + LK + G S K A VE PLGVV AI +
Sbjct: 105 SAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSS--KKIALVEREPLGVVLAISPF 162
Query: 60 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 119
NYP + + A+ +GN +V K + S SG ALA GAPE ++ V+TG
Sbjct: 163 NYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVE----ALADAGAPEGIIQVVTGR 218
Query: 120 AET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 176
G+ LV +D I F G G I A + PV LELGGKD IV DD D+
Sbjct: 219 GSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLELGGKDPAIVLDDADLKL 276
Query: 177 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 236
A V A SGQ C +R +V + V+ + ++V+ ++ G P D+ +
Sbjct: 277 TASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSP-EDDADITPVI 335
Query: 237 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAF 296
+ + +Q L++DAL+ GA +L+ G+ +G PT++ +V M++ EE F
Sbjct: 336 DEKSAAFIQGLIDDALENGATLLS----GNKRQG---NLLSPTLLDDVTPAMRVAWEEPF 388
Query: 297 GPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 356
GP++PI++ E + L+N S YGL ++F+ RA I ++ G IN +
Sbjct: 389 GPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHIN-AKTERG 447
Query: 357 CQSLPFGGVKDSGFGRFAGVEGLRACCL 384
PF GVK SG GV+G++ L
Sbjct: 448 PDHFPFLGVKKSGL----GVQGIKPSLL 471
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 172/368 (46%), Gaps = 23/368 (6%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
PLGV I +WNYP A+ +GN +V K SEN I+ A G
Sbjct: 150 PLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEA----GL 205
Query: 109 PENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 166
P+ L +VI G +TG LV+ D K+ GS GR + A+ L VT+ELGGK
Sbjct: 206 PKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPM 265
Query: 167 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 226
IV DD D+ A+ SSGQ C+ R +V + A F+ + + +++ G PL
Sbjct: 266 IVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPL 325
Query: 227 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH--LSEGAVDQYFPPTVIVNV 284
+G L EK+ + + +GA ++ G + EGA Y PTV +V
Sbjct: 326 DYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGA---YVQPTVFADV 382
Query: 285 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 344
M + +EE FGP+M ++ F+ ++EV+ AN + +GL VF+ RA + ++ G
Sbjct: 383 TDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAG 442
Query: 345 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKP 404
IN + N +PFGG K SGFGR L +K+V Y+ T
Sbjct: 443 TLWINTY--NLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTV-------YVST---GK 490
Query: 405 IQYPVAEN 412
+ P AEN
Sbjct: 491 VDAPYAEN 498
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 199/398 (50%), Gaps = 30/398 (7%)
Query: 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAK---VEFHPLGVVGAIVSWN 60
+++ E++ T E I + EG + ++ E G K K V P+G+V AI +N
Sbjct: 96 SAVSEVVRTAEIINYAAEEGLR-MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFN 154
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF- 119
YP + + + A+ +GN I K S SG ++ A A G P + + ITG
Sbjct: 155 YPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LLAEAFAEAGLPAGVFNTITGRG 210
Query: 120 AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHV 177
+E G+ +V +V+ I F GS G+G I + A + P+ LELGGKD+ IV +D D+
Sbjct: 211 SEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELT 268
Query: 178 AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 237
A+ + A SGQ C +R V + V ++ + V +++ G P D+ L
Sbjct: 269 AKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP-EDDADITPLID 327
Query: 238 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFG 297
+ ++ ++ L+NDA DKGA L EG P + V M+L EE FG
Sbjct: 328 TKSADYVEGLINDANDKGATALTEIK----REG---NLICPILFDKVTTDMRLAWEEPFG 380
Query: 298 PIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC 357
P++PI++ + EE ++++N S YGL ++F+ RA IA Q++ G IN+ +
Sbjct: 381 PVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINN-KTQRGT 439
Query: 358 QSLPFGGVKDSGFGRFAGVEGLR----ACCLVKSVVED 391
+ PF G K SG AG++G++ A VKSVV D
Sbjct: 440 DNFPFLGAKKSG----AGIQGVKYSIEAMTTVKSVVFD 473
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 168/338 (49%), Gaps = 12/338 (3%)
Query: 45 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 104
V + P+GV G IV WN+P I + AA+ +G VIK + + +F +
Sbjct: 143 VHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASETPLTXIAFFSVXDK--- 199
Query: 105 AVGAPENLVDVITGFAET-GEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELG 161
+ P+ V+++ G A G+ L D + F GS VGR ++ + ++ + + LELG
Sbjct: 200 -LDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTAEQVKKLALELG 258
Query: 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 221
G FIV DD D+ A + + GQ C A R +VH + F ++A+ V +
Sbjct: 259 GNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKXT 318
Query: 222 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 281
G D+G L + +K++ + DALDKGA ++A L +G +FPPTV+
Sbjct: 319 VGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGL---FFPPTVV 375
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
V+ QEE FGP++P F T+EEV+ ND+ +GL VF+ RA+ +AA +
Sbjct: 376 QGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGL 435
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
+ G N PFGG K SG GR G+EGL
Sbjct: 436 RFGHVGWN--TGTGPTPEAPFGGXKASGIGREGGLEGL 471
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 172/362 (47%), Gaps = 18/362 (4%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
P G VG I WN P + A+ GN +V+K +E + ++ I++ A
Sbjct: 162 PAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEA----DL 217
Query: 109 PENLVDVITGFAE-TGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165
P + +++ GF E G ALV+ V + G G+++MRNA+ L ++ ELGGK
Sbjct: 218 PPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSP 277
Query: 166 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 225
+V D D+ V +G+ C + R V I+ FV +V + +++ G P
Sbjct: 278 ALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHP 337
Query: 226 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD----QYFPPTVI 281
L + ++G L EH +++ V +GA +L G S D Y PTV
Sbjct: 338 LDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVF 397
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
V NH MK+ QEE FGP++ + F +EE ++ AND++YGL VF+ RA +A ++
Sbjct: 398 VGENH-MKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALEL 456
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKI 401
+ G+ +N + N PFGGVK SG R G L +K++ P +
Sbjct: 457 EAGMVYLN--SHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIA----LPLRPPHV 510
Query: 402 PK 403
PK
Sbjct: 511 PK 512
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 199/398 (50%), Gaps = 30/398 (7%)
Query: 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAK---VEFHPLGVVGAIVSWN 60
+++ E++ T E I + EG + ++ E G K K V P+G+V AI +N
Sbjct: 96 SAVSEVVRTAEIINYAAEEGLR-MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFN 154
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF- 119
YP + + + A+ +GN I K S SG ++ A A G P + + ITG
Sbjct: 155 YPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LLAEAFAEAGLPAGVFNTITGRG 210
Query: 120 AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHV 177
+E G+ +V +V+ I F GS G+G I + A + P+ LELGGKD+ IV +D D+
Sbjct: 211 SEIGDYIVEHQAVNFINFSGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELT 268
Query: 178 AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 237
A+ + A SGQ C +R V + V ++ + V +++ G P D+ L
Sbjct: 269 AKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP-EDDADITPLID 327
Query: 238 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFG 297
+ ++ ++ L+NDA DKGA L EG P + V M+L EE FG
Sbjct: 328 TKSADYVEGLINDANDKGATALTEIK----REG---NLICPILFDKVTTDMRLAWEEPFG 380
Query: 298 PIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC 357
P++PI++ + EE ++++N S YGL ++F+ RA IA Q++ G IN+ +
Sbjct: 381 PVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINN-KTQRGT 439
Query: 358 QSLPFGGVKDSGFGRFAGVEGLR----ACCLVKSVVED 391
+ PF G K SG AG++G++ A VKSVV D
Sbjct: 440 DNFPFLGAKKSG----AGIQGVKYSIEAMTTVKSVVFD 473
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/398 (31%), Positives = 198/398 (49%), Gaps = 30/398 (7%)
Query: 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAK---VEFHPLGVVGAIVSWN 60
+++ E++ T E I + EG + ++ E G K K V P+G+V AI +N
Sbjct: 96 SAVSEVVRTAEIINYAAEEGLR-MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFN 154
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF- 119
YP + + + A+ +GN I K S SG ++ A A G P + + ITG
Sbjct: 155 YPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LLAEAFAEAGLPAGVFNTITGRG 210
Query: 120 AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHV 177
+E G+ +V +V+ I F GS G+G I + A + P+ L LGGKD+ IV +D D+
Sbjct: 211 SEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLALGGKDSAIVLEDADLELT 268
Query: 178 AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 237
A+ + A SGQ C +R V + V ++ + V +++ G P D+ L
Sbjct: 269 AKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP-EDDADITPLID 327
Query: 238 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFG 297
+ ++ ++ L+NDA DKGA L EG P + V M+L EE FG
Sbjct: 328 TKSADYVEGLINDANDKGATALTEIK----REG---NLICPILFDKVTTDMRLAWEEPFG 380
Query: 298 PIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC 357
P++PI++ + EE ++++N S YGL ++F+ RA IA Q++ G IN+ +
Sbjct: 381 PVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINN-KTQRGT 439
Query: 358 QSLPFGGVKDSGFGRFAGVEGLR----ACCLVKSVVED 391
+ PF G K SG AG++G++ A VKSVV D
Sbjct: 440 DNFPFLGAKKSG----AGIQGVKYSIEAMTTVKSVVFD 473
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 173/355 (48%), Gaps = 13/355 (3%)
Query: 40 HKKAKVEFH--PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 97
++ K+ H P GVV I +WN+P + A+ +GN +V+K ++ + R
Sbjct: 137 NQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGR 196
Query: 98 IIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 154
I + A G P+ +++VI G G+ L S I GS G+ I + +++ +T
Sbjct: 197 IAKEA----GLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMT 252
Query: 155 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 214
PV LELGGK +V DD D+ A+ A+ + GQ C ER YVH +Y F+++
Sbjct: 253 PVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFL 312
Query: 215 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 274
+VK + G P+ MG C + + ++V++A+ +GA + G +
Sbjct: 313 PLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGC 372
Query: 275 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 334
++ PTV+V+V ++ EE FGPI+PI+K ++ E+ ++ NDS YGL V + S
Sbjct: 373 WYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANI 432
Query: 335 REIAAQIQCGVAAINDFASNYMCQSLPF-GGVKDSGFGRFAGVEGLRACCLVKSV 388
+ + ++ G IN Q F G K SGFG G GL K+V
Sbjct: 433 NQAISDLEVGEVYINRGMGE---QHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 181/361 (50%), Gaps = 24/361 (6%)
Query: 25 KWLKPEYRSSGRSMIHKKAK-----VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNG 79
+W E R +IH AK V P+GV I WN+P I + AA+ +G
Sbjct: 117 EWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCT 176
Query: 80 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI----TGFAETGEALVSS--VDKI 133
+V+K +E+ +S + A G P + +VI E GEA+ + V KI
Sbjct: 177 VVVKPAEDTPFSALALAELASQA----GIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKI 232
Query: 134 IFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNC 193
F GS G++++ +A+ ++ V++ELGG FIV D +V A+ + +++GQ C
Sbjct: 233 SFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTC 292
Query: 194 AGAERFYVHRDIYALFVSQVAKIVK-SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 252
+ +F V R I+ FV A+ +K ++ G G L + EK++ VNDA+
Sbjct: 293 VCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAV 352
Query: 253 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV 312
KGA ++ G L + +F PT++ NV M EE FGP+ P++KF+T+EE +
Sbjct: 353 SKGATVVTGGKRHQLGK----NFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAI 408
Query: 313 KLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFG 371
+AN + GL +S + +A Q++ G+ +N+ S+ C PFGGVK SG G
Sbjct: 409 AIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVEC---PFGGVKQSGLG 465
Query: 372 R 372
R
Sbjct: 466 R 466
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 125/398 (31%), Positives = 198/398 (49%), Gaps = 30/398 (7%)
Query: 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAK---VEFHPLGVVGAIVSWN 60
+++ E++ T E I + EG + ++ E G K K V P+G+V AI +N
Sbjct: 96 SAVSEVVRTAEIINYAAEEGLR-MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFN 154
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF- 119
YP + + + A+ +GN I K S SG ++ A A G P + + ITG
Sbjct: 155 YPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LLAEAFAEAGLPAGVFNTITGRG 210
Query: 120 AETGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHV 177
+E G+ +V +V+ I F GS G+G I + A + P+ LELGGKD+ IV +D D+
Sbjct: 211 SEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELT 268
Query: 178 AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 237
A+ + A SGQ +R V + V ++ + V +++ G P D+ L
Sbjct: 269 AKNIIAGAFGYSGQRSTAVKRVLVMESVADELVEKIREKVLALTIGNP-EDDADITPLID 327
Query: 238 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFG 297
+ ++ ++ L+NDA DKGA L EG P + V M+L EE FG
Sbjct: 328 TKSADYVEGLINDANDKGATALTEIK----REG---NLICPILFDKVTTDMRLAWEEPFG 380
Query: 298 PIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC 357
P++PI++ + EE ++++N S YGL ++F+ RA IA Q++ G IN+ +
Sbjct: 381 PVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINN-KTQRGT 439
Query: 358 QSLPFGGVKDSGFGRFAGVEGLR----ACCLVKSVVED 391
+ PF G K SG AG++G++ A VKSVV D
Sbjct: 440 DNFPFLGAKKSG----AGIQGVKYSIEAMTTVKSVVFD 473
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 162/334 (48%), Gaps = 14/334 (4%)
Query: 51 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 110
GV+ A WN+P + + GN I++K + N S +II+ A GAPE
Sbjct: 125 GVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRA----GAPE 180
Query: 111 -NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 168
+L+++ + + + + + + GS G + A K L T ELGG DAFIV
Sbjct: 181 GSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTXELGGNDAFIV 240
Query: 169 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 228
DD D + + A + GQ C ++R V + Y + ++ + ++ AG PL
Sbjct: 241 LDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEA 300
Query: 229 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL-SEGAVDQYFPPTVIVNVNHT 287
+ + EKL+ V +A+D GA++ + + + S+GA +F PT++ ++
Sbjct: 301 DTTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQ--YPEIDSKGA---FFRPTILTDIAKD 355
Query: 288 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 347
+ +E FGPI + D ++LANDS YGLG +V RA++++AQI+ G
Sbjct: 356 NPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGXTV 415
Query: 348 INDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 381
IN LPFGG+K SG+GR GL A
Sbjct: 416 IN--GRWITSGELPFGGIKKSGYGRELSGLGLXA 447
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 180/388 (46%), Gaps = 18/388 (4%)
Query: 8 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI-HKKAKVEFHPLGVVGAIVSWNYPFHNI 66
E+ + W G L PE +++ +++A +E+ PLGV+ AI WN+P +
Sbjct: 89 EVTKSAALCDWYAEHGPAXLNPE-----PTLVENQQAVIEYRPLGVILAIXPWNFPLWQV 143
Query: 67 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEAL 126
+ + +GN ++K + N + GC + I LA G P + + E
Sbjct: 144 LRGAVPILLAGNSYLLKHAPNVT--GCA--QXIARILAEAGTPAGVYGWVNANNEGVSQX 199
Query: 127 VSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRA 184
++ + + GS G I A L LELGG D FIV +D D+ + AV
Sbjct: 200 INDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAG 259
Query: 185 ALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 244
Q++GQ CA A+RF V I F + ++ G PL + D+G + ++L
Sbjct: 260 RYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEENDLGPXARFDLRDEL 319
Query: 245 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 304
V ++ +GA +L G EG Y+ TV+ +V ++E FGP+ I
Sbjct: 320 HQQVQASVAEGARLLLGGE-KIAGEG---NYYAATVLADVTPDXTAFRQELFGPVAAITV 375
Query: 305 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGG 364
+ LANDS +GL +F+ A E AA+++CG IN ++++ + FGG
Sbjct: 376 AKDAAHALALANDSEFGLSATIFTADDTLAAEXAARLECGGVFINGYSASDA--RVAFGG 433
Query: 365 VKDSGFGRFAGVEGLRACCLVKSVVEDR 392
VK SGFGR GL C V++V ++R
Sbjct: 434 VKKSGFGRELSHFGLHEFCNVQTVWKNR 461
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 173/345 (50%), Gaps = 15/345 (4%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+G+VGAI +N+P + + + A+ +GN IV S A +II+ AL
Sbjct: 129 EPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYN 188
Query: 108 APENLVDVITGFAET-GEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 164
P + +++TG E G+ +V V+ I F GS VG +I + A + LELGG +
Sbjct: 189 VPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVN 246
Query: 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 224
IV D D+ ++ + +GQ C V I F+ K ++ G
Sbjct: 247 PNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGN 306
Query: 225 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 284
PL K D+G L +EH+E ++ +V A+D+G ++L G F PT I+ V
Sbjct: 307 PLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDK-------ALFYPT-ILEV 358
Query: 285 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 344
+ L + E F P++PI++ N +EE++ +AN + YGL A+F+ +++ + A ++ G
Sbjct: 359 DRDNILCKTETFAPVIPIIRTN-EEEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFG 417
Query: 345 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
IND +S + ++PFGGVK SG GR + +K+++
Sbjct: 418 GVVIND-SSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTII 461
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 178/364 (48%), Gaps = 21/364 (5%)
Query: 30 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 89
EY SMI + PLGVV +I WNYP + A+ +GN +V+K SE
Sbjct: 146 EYLEGHTSMIRRD------PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITP 199
Query: 90 WSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIM 146
+ + A LA P +V+++ G +T G+ L V + GS G I+
Sbjct: 200 LTA-----LKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHII 254
Query: 147 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY 206
+ + ++ +ELGGK IV DD D+ V + ++GQ+C A R Y + IY
Sbjct: 255 SHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIY 314
Query: 207 ALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH 266
V ++ V ++ +G P ++G L L H E++ V +A G + G
Sbjct: 315 DTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKR 374
Query: 267 LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 326
G Y+ PT++ ++Q+E FGP++ + F+ +E+VV ANDS+YGL +V
Sbjct: 375 KGNG---YYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSV 431
Query: 327 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQS-LPFGGVKDSGFGRFAGVEGLRACCLV 385
++ RA ++A++Q G +N +++M S +P GG K SG+G+ + GL +V
Sbjct: 432 WTKDVGRAHRVSARLQYGCTWVN---THFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVV 488
Query: 386 KSVV 389
+ V+
Sbjct: 489 RHVM 492
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 180/361 (49%), Gaps = 24/361 (6%)
Query: 25 KWLKPEYRSSGRSMIHKKAK-----VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNG 79
+W E R +IH AK V P+GV I WN+P I + AA+ +G
Sbjct: 117 EWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCT 176
Query: 80 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI----TGFAETGEALVSS--VDKI 133
+V+K +E+ +S + A G P + +VI E GEA+ + V KI
Sbjct: 177 VVVKPAEDTPFSALALAELASQA----GIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKI 232
Query: 134 IFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNC 193
F GS G++++ +A+ ++ V++ELGG FIV D +V A+ + +++GQ
Sbjct: 233 SFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTA 292
Query: 194 AGAERFYVHRDIYALFVSQVAKIVK-SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 252
+ +F V R I+ FV A+ +K ++ G G L + EK++ VNDA+
Sbjct: 293 VCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAV 352
Query: 253 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV 312
KGA ++ G L + +F PT++ NV M EE FGP+ P++KF+T+EE +
Sbjct: 353 SKGATVVTGGKRHQLGK----NFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAI 408
Query: 313 KLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFG 371
+AN + GL +S + +A Q++ G+ +N+ S+ C PFGGVK SG G
Sbjct: 409 AIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVEC---PFGGVKQSGLG 465
Query: 372 R 372
R
Sbjct: 466 R 466
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 165/362 (45%), Gaps = 17/362 (4%)
Query: 41 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ 100
K K+ PLGV+ +I +N+P + + A+ GN +V K + SG II
Sbjct: 135 KTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGG---TIIA 191
Query: 101 AALAAVGAPENLVDV-ITGFAETGEALVSS-VDKII-FVGSPGVGRMIMRNASKTLTPVT 157
A G P +++V +T E G+ ++++ + ++I F GS VGR I A + +
Sbjct: 192 KAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMA 251
Query: 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 217
LELGG + F V D DV A+ GQ C R VH+D+Y FV + V
Sbjct: 252 LELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARV 311
Query: 218 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 277
K + G K +G L EK ++ A G E+ G V
Sbjct: 312 KQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK-------RVGNVLT 364
Query: 278 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 337
P V V ++ K+ Q E F PI I+K +D+E + +AND+ YGL AVF+ + +
Sbjct: 365 PYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKF 424
Query: 338 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG---VEGLRACCLVKSVVEDRWW 394
A QI G+ +ND + N ++ FGG K SG GRF VE + + R +
Sbjct: 425 ALQIDSGMTHVNDQSVND-SPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQKQYRKY 483
Query: 395 PY 396
P+
Sbjct: 484 PF 485
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 168/360 (46%), Gaps = 15/360 (4%)
Query: 33 SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 92
++G + + + P+G+VG+I WNYP + A+ GN +V K SE +
Sbjct: 145 AAGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLTA 204
Query: 93 CFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNA 149
R+I L PE +V+VITG ET G AL++ V + G G+ ++ A
Sbjct: 205 LKLARLIADIL-----PEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAAA 259
Query: 150 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 209
+KT+ LELGGK IV D D+ V ++GQ+C A R Y IY
Sbjct: 260 AKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKL 319
Query: 210 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLS 268
V+ + V ++ + ++G L +++ + V A D K EI G G
Sbjct: 320 VADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGS-D 378
Query: 269 EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 328
EG +F PTV+ ++++ E FGP++ + +F ++ V ANDS YGL +V++
Sbjct: 379 EGF---FFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWT 435
Query: 329 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
+A A+++Q G IN + P GG+K SG+G+ V L V+ +
Sbjct: 436 KDISKAXRAASRLQYGCTWINTHFX--LTNEXPHGGIKQSGYGKDXSVYALEDYTAVRHI 493
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 184/374 (49%), Gaps = 28/374 (7%)
Query: 7 GEIMTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF 63
GE++ I W E ++ P ++ R + + P+GV AI WN+P
Sbjct: 129 GEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIR------QPVGVTAAITPWNFPA 182
Query: 64 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ET 122
I A+ +G ++++ ++ + + + A G P ++ ++TG A E
Sbjct: 183 AMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKA----GIPAGVLQIVTGKAREI 238
Query: 123 GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
G L S +V K+ F GS VGR++M + T+ ++LELGG FIV DD D+
Sbjct: 239 GAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDG 298
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
A+ + +++GQ C A R YV R +Y F ++A VK + G +G + +
Sbjct: 299 AMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKA 358
Query: 241 SEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 299
K++ + DA+ KGA+++ G G L +F P ++ V M + +EE FGP+
Sbjct: 359 ITKVKAHIEDAVSKGAKLITGGKELGGL-------FFEPGILTGVTSDMLVAKEETFGPL 411
Query: 300 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQ 358
P+ F+T+EEV+ AND+ +GL ++ + RA ++ ++ G+ N SN +
Sbjct: 412 APLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVA- 470
Query: 359 SLPFGGVKDSGFGR 372
PFGGVK SG GR
Sbjct: 471 --PFGGVKQSGLGR 482
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 170/371 (45%), Gaps = 18/371 (4%)
Query: 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 65
L EI +I + L+ ++W+ P S + + V P GV I +NYP +
Sbjct: 87 LAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNL 146
Query: 66 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEA 125
P++ A+ GN +IK SE + +II A A PE + + G E
Sbjct: 147 TLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFA----PEYVAVIQGGRDENSHL 202
Query: 126 LVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAA 185
L D I F GSP VG+++M+ A+K LTPV LELGGK IV D D+ +
Sbjct: 203 LSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGK 262
Query: 186 LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 245
+SGQ C + YVH Y++ + + ++V+ V P ++ + L ++Q
Sbjct: 263 FINSGQTCIAPDYLYVH---YSVKDALLERLVERVKTELP-----EINSTGKLVTERQVQ 314
Query: 246 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 305
LV+ ++L GS +S+ A+ TV+ V LM EE FGPI+P+++F
Sbjct: 315 RLVSLLEATQGQVLV-GSQADVSKRALSA----TVVDGVEWNDPLMSEELFGPILPVLEF 369
Query: 306 NTDEEVVKLANDSR-YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGG 364
++ + N L VF A+ I QIQ G A +N + LPFGG
Sbjct: 370 DSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGG 429
Query: 365 VKDSGFGRFAG 375
+ SG G + G
Sbjct: 430 IGASGMGEYHG 440
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 170/348 (48%), Gaps = 16/348 (4%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G ++ WNYP + A + +GN +VIK ++ + + + A G
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----G 232
Query: 108 APENLVDVITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGK 163
P+ +V+++ G G+ L D KI F GS VG+ IM++ A + V+LELGGK
Sbjct: 233 IPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGK 292
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ Q+ + + + G+NC A R +V I+ FV +V + V+ + G
Sbjct: 293 SPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 283
PL + G H KL + +GA ++ G+ + +F PTV +
Sbjct: 353 NPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTD 408
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
V M + +EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++
Sbjct: 409 VEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKL 468
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
Q G IN + N + PFGG K SGFG+ G L +K+V
Sbjct: 469 QAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 170/348 (48%), Gaps = 16/348 (4%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G ++ WNYP + A + +GN +VIK ++ + + + A G
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----G 232
Query: 108 APENLVDVITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGK 163
P+ +V+++ G G+ L D KI F GS VG+ IM++ A + V+L+LGGK
Sbjct: 233 IPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLQLGGK 292
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ Q+ + + + G+NC A R +V I+ FV +V + V+ + G
Sbjct: 293 SPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 283
PL + G H KL + +GA ++ G+ + +F PTV +
Sbjct: 353 NPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTD 408
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
V M + +EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++
Sbjct: 409 VEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKL 468
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
Q G IN + N + PFGG K SGFG+ G L +K+V
Sbjct: 469 QAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 169/348 (48%), Gaps = 16/348 (4%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G ++ WNYP + A + +GN +VIK ++ + + + A G
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----G 232
Query: 108 APENLVDVITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGK 163
P+ +V+++ G G+ L D KI F GS VG+ IM++ A + V+L LGGK
Sbjct: 233 IPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGK 292
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ Q+ + + + G+NC A R +V I+ FV +V + V+ + G
Sbjct: 293 SPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 283
PL + G H KL + +GA ++ G+ + +F PTV +
Sbjct: 353 NPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTD 408
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
V M + +EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++
Sbjct: 409 VEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKL 468
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
Q G IN + N + PFGG K SGFG+ G L +K+V
Sbjct: 469 QAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 169/348 (48%), Gaps = 16/348 (4%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G ++ WNYP + A + +GN +VIK ++ + + + A G
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----G 232
Query: 108 APENLVDVITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGK 163
P+ +V+++ G G+ L D KI F GS VG+ IM++ A + V+LELGGK
Sbjct: 233 IPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGK 292
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ Q+ + + + G+N A R +V I+ FV +V + V+ + G
Sbjct: 293 SPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 283
PL + G H KL + +GA ++ G+ + +F PTV +
Sbjct: 353 NPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTD 408
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
V M + +EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++
Sbjct: 409 VEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKL 468
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
Q G IN + N + PFGG K SGFG+ G L +K+V
Sbjct: 469 QAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 169/371 (45%), Gaps = 18/371 (4%)
Query: 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 65
L EI +I + L+ ++W+ P S + + V P GV I +NYP +
Sbjct: 87 LAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNL 146
Query: 66 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEA 125
P++ A+ GN +IK SE + +II A A PE + + G E
Sbjct: 147 TLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFA----PEYVAVIQGGRDENSHL 202
Query: 126 LVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAA 185
L D I F GSP VG+++M+ A+K LTPV LELGGK IV D D+ +
Sbjct: 203 LSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGK 262
Query: 186 LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 245
+SGQ + YVH Y++ + + ++V+ V P ++ + L ++Q
Sbjct: 263 FINSGQTXIAPDYLYVH---YSVKDALLERLVERVKTELP-----EINSTGKLVTERQVQ 314
Query: 246 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 305
LV+ ++L GS +S+ A+ TV+ V LM EE FGPI+P+++F
Sbjct: 315 RLVSLLEATQGQVLV-GSQADVSKRALSA----TVVDGVEWNDPLMSEELFGPILPVLEF 369
Query: 306 NTDEEVVKLANDSR-YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGG 364
++ + N L VF A+ I QIQ G A +N + LPFGG
Sbjct: 370 DSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGG 429
Query: 365 VKDSGFGRFAG 375
+ SG G + G
Sbjct: 430 IGASGMGEYHG 440
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 169/348 (48%), Gaps = 16/348 (4%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G ++ WNYP + A + +GN +VIK ++ + + + A G
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----G 232
Query: 108 APENLVDVITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGK 163
P+ +V+++ G G+ L D KI F GS VG+ IM++ A + V+LELGGK
Sbjct: 233 IPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGK 292
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ Q+ + + + G+N A R +V I+ FV +V + V+ + G
Sbjct: 293 SPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 283
PL + G H KL + +GA ++ G+ + +F PTV +
Sbjct: 353 NPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTD 408
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
V M + +EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++
Sbjct: 409 VEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKL 468
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
Q G IN + N + PFGG K SGFG+ G L +K+V
Sbjct: 469 QAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 162/344 (47%), Gaps = 12/344 (3%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GVVG I WN+PF + A+ SG +V+K SE S + R+ + A A G
Sbjct: 160 EPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTS---IRLAELAREA-G 215
Query: 108 APENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 164
P+ + +V+TG+ + G+ L +VD + F GS VG + A++T+ V LELGGK
Sbjct: 216 IPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEIAARTVKRVGLELGGKG 275
Query: 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 224
IV D D+ A ++GQ C R V I ++ I + V+ G
Sbjct: 276 PQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALXERLLDISRKVAFGD 335
Query: 225 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 284
PL + +GA H+EK+ + V + GAE+L G G Y+ PTV V
Sbjct: 336 PLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGL---YYAPTVFAGV 392
Query: 285 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 344
+ +EE FGP++ + F T +E V LAN + +GL +V+S + A + +I+ G
Sbjct: 393 TPDXSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAG 452
Query: 345 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
IN LP GG K SG GR G G K V
Sbjct: 453 RCWINSVIDG--TPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 168/348 (48%), Gaps = 16/348 (4%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+GV G ++ WNYP + A + +GN +VIK ++ + + + A G
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----G 232
Query: 108 APENLVDVITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGK 163
P+ +V+++ G G+ L D KI F GS VG+ IM++ A + V+L LGGK
Sbjct: 233 IPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGK 292
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ Q+ + + + G+N A R +V I+ FV +V + V+ + G
Sbjct: 293 SPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 283
PL + G H KL + +GA ++ G+ + +F PTV +
Sbjct: 353 NPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTD 408
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
V M + +EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++
Sbjct: 409 VEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKL 468
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
Q G IN + N + PFGG K SGFG+ G L +K+V
Sbjct: 469 QAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 157/338 (46%), Gaps = 18/338 (5%)
Query: 47 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 106
+ P GV I WN+ F + +A + +GN +V+K + A + +++ +
Sbjct: 170 YTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEES---- 225
Query: 107 GAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT------LTPVT 157
G P+ +V+ + G AE G+ LV I F GS VG I A+K L V
Sbjct: 226 GLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVI 285
Query: 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 217
E+GGKD +V +D D+ AQ +A +GQ C+ R VH +Y + +V +I
Sbjct: 286 AEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVLKRVIEIT 345
Query: 218 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 277
+S G P + MG + K+ + + ++G L G G S+G +
Sbjct: 346 ESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGR--LVSGGKGDDSKG---YFIE 400
Query: 278 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 337
PT+ +++ +LMQEE FGP++ K ++ +E +++AN++ YGL AV + ++
Sbjct: 401 PTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINRA 460
Query: 338 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
+ G N + + PFGG K SG AG
Sbjct: 461 KQEFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 158/338 (46%), Gaps = 18/338 (5%)
Query: 47 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 106
+ P+GV I WN+ + +A + +GN +V+K + + +++ A
Sbjct: 170 YTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDA---- 225
Query: 107 GAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVG-RM-----IMRNASKTLTPVT 157
G P+ +++ + G AE G+ LV I F GS VG R+ ++R L V
Sbjct: 226 GLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVI 285
Query: 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 217
+E+GGKD +V D D+ A+ + +A SGQ C+ R +H+D+Y + + +
Sbjct: 286 VEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALA 345
Query: 218 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 277
K+++ G P MG + + EK+ + + +G L G G S G +
Sbjct: 346 KNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGR--LMTGGEGDSSTGF---FIQ 400
Query: 278 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 337
PT+I +++ +MQEE FGP++ K N + +++AN++ YGL AV + ++ +
Sbjct: 401 PTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQA 460
Query: 338 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
+ G N + + PFGG K SG AG
Sbjct: 461 KREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 162/349 (46%), Gaps = 24/349 (6%)
Query: 51 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK-VSENASWSGCFYFRIIQAALAAVGAP 109
GVVG I WN+P + + A+ GN +VIK S+ G RI + A G P
Sbjct: 150 GVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEA----GVP 205
Query: 110 ENLVDVITGF-AETGEALVS-SVDKII-FVGSPGVGRMIMRNA--SKTLTPVTLELGGKD 164
++ + G +E G+ V+ +V K+I F GS VGR + A + V LELGG
Sbjct: 206 AGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNA 265
Query: 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 224
F+V D D+ AQ A A GQ C R V ++ F+ + + VK++ G
Sbjct: 266 PFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGD 325
Query: 225 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 284
P A +G + L+ + A +GA + G EG + P V +V
Sbjct: 326 PSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI----EG---RLVHPHVFSDV 378
Query: 285 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 344
M++ +EE FGP++ ++K + + +LAN S +GL AV+S RA + A QI G
Sbjct: 379 TSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSG 438
Query: 345 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 393
+ IND N + FGG K+SG GRF G ++ DRW
Sbjct: 439 MVHINDLTVNDEPHVM-FGGSKNSGLGRFNG------DWAIEEFTTDRW 480
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 151/350 (43%), Gaps = 18/350 (5%)
Query: 45 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 104
V PLGVV AI +NYP + N + + GN +V+K S + + AL
Sbjct: 153 VRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK----ALL 208
Query: 105 AVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162
G P + + ++ + E +V+ V + F GS VG +++ + +ELGG
Sbjct: 209 DAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGG 266
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
D IV +D D+ A R +GQ C + R +Y V +VAK + S+
Sbjct: 267 GDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRV 326
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI- 281
G P D+G L +++ + DA++KG +LA G L Y PT++
Sbjct: 327 GDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR--RLGP----TYVQPTLVE 380
Query: 282 --VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 339
+ M L + E F P+ ++ ++ ++LAN YGL AVF + R
Sbjct: 381 APADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 340 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
++ G IND + PFGG K SG R + A K++V
Sbjct: 441 LLEVGAIYINDM-PRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 151/350 (43%), Gaps = 18/350 (5%)
Query: 45 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 104
V PLGVV AI +NYP + N + + GN +V+K S + + AL
Sbjct: 153 VRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK----ALL 208
Query: 105 AVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162
G P + + ++ + E +V+ V + F GS VG +++ + +ELGG
Sbjct: 209 DAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGG 266
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
D IV +D D+ A R +GQ C + R +Y V +VAK + S+
Sbjct: 267 GDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRV 326
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI- 281
G P D+G L +++ + DA++KG +LA G L Y PT++
Sbjct: 327 GDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR--RLGP----TYVQPTLVE 380
Query: 282 --VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 339
+ M L + E F P+ ++ ++ ++LAN YGL AVF + R
Sbjct: 381 APADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 340 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
++ G IND + PFGG K SG R + A K++V
Sbjct: 441 LLEVGAIYINDM-PRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 150/350 (42%), Gaps = 18/350 (5%)
Query: 45 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 104
V PLGVV AI +NYP + N + + GN +V+K S + + AL
Sbjct: 153 VRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK----ALL 208
Query: 105 AVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162
G P + + ++ + E +V+ V + F GS VG +++ + +ELGG
Sbjct: 209 DAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGG 266
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
D IV +D D+ A R +GQ C + R +Y V +VAK + S+
Sbjct: 267 GDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRV 326
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI- 281
G P D+G L +++ + DA++KG +LA G L Y PT +
Sbjct: 327 GDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR--RLGP----TYVQPTFVE 380
Query: 282 --VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 339
+ M L + E F P+ ++ ++ ++LAN YGL AVF + R
Sbjct: 381 APADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 340 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
++ G IND + PFGG K SG R + A K++V
Sbjct: 441 LLEVGAIYINDM-PRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 151/339 (44%), Gaps = 9/339 (2%)
Query: 46 EFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
+++P+G+VG I ++N+P A+ GN + K + + +I+ L
Sbjct: 152 QWNPVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQ 211
Query: 106 VGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163
P + + G A+ G A+ VD + F GS VG+M+ + LELGG
Sbjct: 212 NNLPGAICSMTCGGADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKLLELGGN 271
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
+A IV +D D+ V AV A++ ++GQ C R +H ++ V ++AK K V G
Sbjct: 272 NAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHESVHDAVVERIAKAYKQVRIG 331
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 283
P G L + ++ + A +G ++ G Y PT+I
Sbjct: 332 DPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRP----GNYVEPTIITG 387
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA-REIAAQ-I 341
+ H ++ E F PI+ ++KF T+EE N+ + GL ++F+ R R + +
Sbjct: 388 LAHDAPIVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIFTKDLGRVFRWLGPKGS 447
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 380
CG+ +N S FGG K +G GR +G + +
Sbjct: 448 DCGIVNVNIPTSGAEIGG-AFGGEKHTGGGRESGSDSWK 485
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 156/356 (43%), Gaps = 24/356 (6%)
Query: 47 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 106
+ PLG I WN+P ++ V GN ++ K +E+A G F I A
Sbjct: 171 YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA---- 226
Query: 107 GAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP-------V 156
G P +V+ + G E G LV + I F GS VG I A + L P
Sbjct: 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRA 285
Query: 157 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 216
+E GGKDA IV + D A+ V +A GQ C+ A R + + Y + +V K
Sbjct: 286 YVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKR 345
Query: 217 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 276
+ +S GP D+G + E K+ + + ++G +L G EG + YF
Sbjct: 346 AERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLG----GKRLEG--EGYF 398
Query: 277 -PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 335
PTV V ++ QEE FGP++ +++ E +++AND+ YGL V+S +
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLE 458
Query: 336 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKSVVE 390
+ G N + + PFGG K SG G ++ LR +K+V E
Sbjct: 459 WARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 153/351 (43%), Gaps = 14/351 (3%)
Query: 34 SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 93
SG ++I +++P+G+VG I ++N+P A+ GN + K + S
Sbjct: 147 SGHALIE-----QWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISV 201
Query: 94 FYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASK 151
+II L P + + G A+ G A+ V+ + F GS VG+ + +
Sbjct: 202 AVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQE 261
Query: 152 TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVS 211
LELGG +A I +D D+ V A+ AA+ ++GQ C A R ++H I+ V+
Sbjct: 262 RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVN 321
Query: 212 QVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGA 271
++ K + G P G L + V +A +G ++ +G
Sbjct: 322 RLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVV----YGGKVMDR 377
Query: 272 VDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 331
Y PT++ + H + E F PI+ + KF +EEV N+ + GL ++F+
Sbjct: 378 PGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDL 437
Query: 332 HRA-REIAAQ-IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 380
R R + + CG+ +N S FGG K +G GR +G + +
Sbjct: 438 GRIFRWLGPKGSDCGIVNVNIPTSGAEIGG-AFGGEKHTGGGRESGSDAWK 487
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 156/356 (43%), Gaps = 24/356 (6%)
Query: 47 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 106
+ PLG I WN+P ++ V GN ++ K +E+A G F I A
Sbjct: 171 YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA---- 226
Query: 107 GAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP-------V 156
G P +V+ + G E G LV + I F GS VG I A + L P
Sbjct: 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRA 285
Query: 157 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 216
+E GGK+A IV + D A+ V +A GQ C+ A R + + Y + +V K
Sbjct: 286 YVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKR 345
Query: 217 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 276
+ +S GP D+G + E K+ + + ++G +L G EG + YF
Sbjct: 346 AERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLG----GKRLEG--EGYF 398
Query: 277 -PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 335
PTV V ++ QEE FGP++ +++ E +++AND+ YGL V+S +
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLE 458
Query: 336 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKSVVE 390
+ G N + + PFGG K SG G ++ LR +K+V E
Sbjct: 459 WARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 155/356 (43%), Gaps = 24/356 (6%)
Query: 47 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 106
+ PLG I WN+P ++ V GN ++ K +E+A G F I A
Sbjct: 171 YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA---- 226
Query: 107 GAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP-------V 156
G P +V+ + G E G LV + I F GS VG I A + L P
Sbjct: 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRA 285
Query: 157 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 216
+E GGKDA IV + D A+ V +A GQ + A R + + Y + +V K
Sbjct: 286 YVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPVLERVLKR 345
Query: 217 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 276
+ +S GP D+G + E K+ + + ++G +L G EG + YF
Sbjct: 346 AERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLG----GKRLEG--EGYF 398
Query: 277 -PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 335
PTV V ++ QEE FGP++ +++ E +++AND+ YGL V+S +
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLE 458
Query: 336 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKSVVE 390
+ G N + + PFGG K SG G ++ LR +K+V E
Sbjct: 459 WARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 148/327 (45%), Gaps = 12/327 (3%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
+P+GVVG I +N+P A+ GN ++K SE + + A G
Sbjct: 140 YPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKA----G 195
Query: 108 APENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165
P+ + +V+ G + ++ + I FVGS VG + + S+ L V G K+
Sbjct: 196 LPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNH 255
Query: 166 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 225
IV +D ++ V AA S+G+ C V I F++++ + V + G
Sbjct: 256 TIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNG 315
Query: 226 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNV 284
L +G + ++ ++ + + L++GA ++ G ++S+ D YF PT+ NV
Sbjct: 316 LDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGR-ENVSD---DGYFVGPTIFDNV 371
Query: 285 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 344
M + ++E F P++ +++ +E +++AN S + G +F+ + + R I G
Sbjct: 372 TTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAG 431
Query: 345 VAAINDFASNYMCQSLPFGGVKDSGFG 371
+ IN M PF G K S FG
Sbjct: 432 MLGINLGVPAPMA-FFPFSGWKSSFFG 457
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 154/347 (44%), Gaps = 36/347 (10%)
Query: 47 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 106
+ P GV I WN+P AA+ +GN +V K S S G + + A
Sbjct: 664 YEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREA---- 719
Query: 107 GAPENLVDVITGFAET-GEALVSSVD--KIIFVGSPGVGRMIMRNASK------TLTPVT 157
G PE + + G G+ LV D I F GS G I+ A+K + +
Sbjct: 720 GLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKII 779
Query: 158 LELGGKDAFIVCDDVD----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 213
E+GGK+A I+ DD D VPHV + +A GQ C+ R V +Y F+ ++
Sbjct: 780 SEMGGKNAIIIDDDADLDEAVPHV----LYSAFGFQGQKCSACSRVIVLDAVYDKFIERL 835
Query: 214 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH-LSEGAV 272
+ K+ GP MGA+ + ++ + AEI R GH L E V
Sbjct: 836 VSMAKATKVGPSEDPANYMGAVA--------DDKAMKSIKEYAEIGKRE--GHVLYESPV 885
Query: 273 ---DQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 328
+ YF P T+I + ++ QEE FGP++ +M+ ++ ++ AN +++ L +FS
Sbjct: 886 PAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFS 945
Query: 329 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
S + + + G IN + + + PFGG + SG G AG
Sbjct: 946 RSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAG 992
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 166/386 (43%), Gaps = 32/386 (8%)
Query: 2 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 61
+D +L E+ + + ++G K E G + + + GV AI WN+
Sbjct: 604 LDDALSELREAADFCRYYAAQGRKLFGSETAMPGPT--GESNALTMRGRGVFVAISPWNF 661
Query: 62 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV---GAPENLVDVITG 118
P + AA+ +GN +V K +E RI + A+A + G P++ + ++TG
Sbjct: 662 PLAIFLGQVTAALMAGNSVVAKPAEQTP-------RIAREAVALLHEAGIPKSALYLVTG 714
Query: 119 FAETGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKT--LTPVTLELGGKDAFIVCDDVD 173
G AL + D ++F GS V R I R A+K + P+ E GG +A I D
Sbjct: 715 DGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMI-ADATA 773
Query: 174 VP-HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 232
+P VA V +A +S+GQ C+ +V D+ + VA + + G P +
Sbjct: 774 LPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHV 833
Query: 233 GALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYFPPTVIVNVNHTMKLM 291
G + +E ++L DA + AR F G EG F I + +L
Sbjct: 834 GPVIDVEAKQRL-----DAHIARMKTEARLHFAGPAPEGC----FVAPHIFELTEAGQLT 884
Query: 292 QEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 349
EE FGPI+ ++++ + E V++ + YGL V S I ++Q G +N
Sbjct: 885 -EEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVN 943
Query: 350 DFASNYMCQSLPFGGVKDSGFGRFAG 375
+ PFGG SG G AG
Sbjct: 944 RNMIGAVVGVQPFGGNGLSGTGPKAG 969
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 153/356 (42%), Gaps = 11/356 (3%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
P+G+ I +N+P A+ GN ++K SE R+ + + A G
Sbjct: 161 QPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDP---SVPIRLAELXIEA-G 216
Query: 108 APENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165
P +++V+ G +A+++ D + FVGS + R + A+ G K+
Sbjct: 217 LPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKRAQCFGGAKNH 276
Query: 166 FIVCDDVDVPHVAQIAVRAALQSSGQNC-AGAERFYVHRDIYALFVSQVAKIVKSVSAGP 224
I+ D D+ A + A S+G+ C A + V + + ++ V+S+ GP
Sbjct: 277 XIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLIDKLVPXVESLRIGP 336
Query: 225 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 284
K D G + E +++++L++ +++GA+++ G L + + +V
Sbjct: 337 YTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDV 396
Query: 285 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 344
+ + E FGP++ +++ EE + L YG G A+++ AR+ A++I G
Sbjct: 397 TPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAARDFASRINIG 456
Query: 345 VAAINDFASNYMCQSLPFGGVKDSGFGRF--AGVEGLRACCLVKSVVEDRWWPYIK 398
+N FGG K S FG G + ++ K++ RW IK
Sbjct: 457 XVGVN-VPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITS-RWPSGIK 510
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 157/340 (46%), Gaps = 25/340 (7%)
Query: 43 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRI-IQA 101
A + P GVV +N+P H ++ A+ +GN +V K SE + IQA
Sbjct: 133 AVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQA 192
Query: 102 ALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN-ASKTLTPVTL 158
L P +++++ G ETG AL + +D + F GS G ++ + + L
Sbjct: 193 GL-----PAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILAL 247
Query: 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 218
E GG + +V + D+ +++A S+GQ C A R V + + + +A++V
Sbjct: 248 EXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDAL--LARLV- 304
Query: 219 SVSAGPPLAGKYD------MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV 272
+VSA + G++D GA+ L +E L + KGA+ L + +GA
Sbjct: 305 AVSATLRV-GRFDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXT--QPIDGAA 361
Query: 273 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 332
P I++V+ + EE FGP++ +++++ ++ AN ++YGL + S S+
Sbjct: 362 --LLTPG-ILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRE 418
Query: 333 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR 372
R + + + G+ N + S PFGG+ SG R
Sbjct: 419 RFEQFLVESRAGIVNWNKQLTG-AASSAPFGGIGASGNHR 457
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 137/323 (42%), Gaps = 42/323 (13%)
Query: 72 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS- 129
A GN ++ K S+ A + +RI++ A G P N++ + T G+ + SS
Sbjct: 222 APALMGNVVLWKPSDTAMLASYAVYRILREA----GLPPNIIQFVPADGPTFGDTVTSSE 277
Query: 130 -VDKIIFVGSPGVGRMIMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 182
+ I F GS + + R + +T + E GGK+ V DV V +
Sbjct: 278 HLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTL 337
Query: 183 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP-------LAGKYDMGAL 235
R+A + GQ C+ R YV + ++ ++ + + G P + D A
Sbjct: 338 RSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAF 397
Query: 236 C----LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 291
LEH+ +L ILA G +V Y P +I + + +M
Sbjct: 398 ARIKKWLEHARSSPSL---------SILAGGQCNE----SVGYYVEPCIIESKDPQEPIM 444
Query: 292 QEEAFGPIMPIMKFNTDE--EVVKLAND-SRYGLGCAVFSGSQHRAREIAAQIQ--CGVA 346
+EE FGP++ + + D+ E +KL + + YGL AVF+ + +E ++ G
Sbjct: 445 KEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNF 504
Query: 347 AINDFASNYMCQSLPFGGVKDSG 369
IND ++ + PFGG + SG
Sbjct: 505 YINDKSTGSVVGQQPFGGARASG 527
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 135/326 (41%), Gaps = 48/326 (14%)
Query: 72 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS- 129
A GN ++ K S+ A + +RI++ A G P N++ + G+ + SS
Sbjct: 225 APALMGNVVLWKPSDTAMLASYAVYRILREA----GLPPNIIQFVPADGPLFGDTVTSSE 280
Query: 130 -VDKIIFVGSPGVGRMIMRNASK------TLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 182
+ I F GS + + + ++ T + E GGK+ V DV V +
Sbjct: 281 HLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTL 340
Query: 183 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC------ 236
R+A + GQ C+ R YV ++ ++ + + G P D G
Sbjct: 341 RSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDPAE---DFGTFFSAVIDA 397
Query: 237 --------LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM 288
LEH+ +L ILA G + +V + P ++ + +
Sbjct: 398 KSFARIKKWLEHARSSPSLT---------ILAGGK----CDDSVGYFVEPCIVESKDPQE 444
Query: 289 KLMQEEAFGPIMPIMKFNTD--EEVVKLAND-SRYGLGCAVFSGSQHRAREIAAQIQ--C 343
+M+EE FGP++ + + D +E ++L + + YGL AVFS + +E ++
Sbjct: 445 PIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAA 504
Query: 344 GVAAINDFASNYMCQSLPFGGVKDSG 369
G IND ++ + PFGG + SG
Sbjct: 505 GNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 135/326 (41%), Gaps = 48/326 (14%)
Query: 72 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS- 129
A GN ++ K S+ A + +RI++ A G P N++ + G+ + SS
Sbjct: 225 APALMGNVVLWKPSDTAMLASYAVYRILREA----GLPPNIIQFVPADGPLFGDTVTSSE 280
Query: 130 -VDKIIFVGSPGVGRMIMRNASK------TLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 182
+ I F GS + + + ++ T + E GGK+ V DV V +
Sbjct: 281 HLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTL 340
Query: 183 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC------ 236
R+A + GQ C+ R YV ++ ++ + + G P D G
Sbjct: 341 RSAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKVGDPAE---DFGTFFSAVIDA 397
Query: 237 --------LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM 288
LEH+ +L ILA G + +V + P ++ + +
Sbjct: 398 KSFARIKKWLEHARSSPSLT---------ILAGGK----CDDSVGYFVEPCIVESKDPQE 444
Query: 289 KLMQEEAFGPIMPIMKFNTD--EEVVKLAND-SRYGLGCAVFSGSQHRAREIAAQIQ--C 343
+M+EE FGP++ + + D +E ++L + + YGL AVFS + +E ++
Sbjct: 445 PIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAA 504
Query: 344 GVAAINDFASNYMCQSLPFGGVKDSG 369
G IND ++ + PFGG + SG
Sbjct: 505 GNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 135/326 (41%), Gaps = 48/326 (14%)
Query: 72 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS- 129
A GN ++ K S+ A + +RI++ A G P N++ + G+ + SS
Sbjct: 225 APALMGNVVLWKPSDTAMLASYAVYRILREA----GLPPNIIQFVPADGPLFGDTVTSSE 280
Query: 130 -VDKIIFVGSPGVGRMIMRNASK------TLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 182
+ I F GS + + + ++ T + E GGK+ V DV V +
Sbjct: 281 HLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTL 340
Query: 183 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC------ 236
R+A + GQ C+ R YV ++ ++ + + G P D G
Sbjct: 341 RSAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDPAE---DFGTFFSAVIDA 397
Query: 237 --------LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM 288
LEH+ +L ILA G + +V + P ++ + +
Sbjct: 398 KSFARIKKWLEHARSSPSLT---------ILAGGK----CDDSVGYFVEPCIVESKDPQE 444
Query: 289 KLMQEEAFGPIMPIMKFNTD--EEVVKLAND-SRYGLGCAVFSGSQHRAREIAAQIQ--C 343
+M+EE FGP++ + + D +E ++L + + YGL AVFS + +E ++
Sbjct: 445 PIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAA 504
Query: 344 GVAAINDFASNYMCQSLPFGGVKDSG 369
G IND ++ + PFGG + SG
Sbjct: 505 GNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3K9D|A Chain A, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|B Chain B, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|C Chain C, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|D Chain D, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
Length = 464
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
PLGVV ++ P + L ++ +GN IV NA + RII A G
Sbjct: 108 PLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGC 167
Query: 109 PENLVDVITGFAETG-EALVSSVDKIIFVGSPGVGRMIMRNASKTLTP-VTLELGGKDAF 166
P+ + +T G + L+ D + + + G +++ A + TP + + G AF
Sbjct: 168 PKGAISCMTVPTIQGTDQLMKHKDTAVILATG--GSAMVKAAYSSGTPAIGVGPGNGPAF 225
Query: 167 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 203
I ++P + + + +G CA + V R
Sbjct: 226 IE-RSANIPRAVKHILDSKTFDNGTICASEQSVVVER 261
>pdb|1O20|A Chain A, Crystal Structure Of Gamma-glutamyl Phosphate Reductase
(tm0293) From Thermotoga Maritima At 2.00 A Resolution
Length = 427
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 23/216 (10%)
Query: 3 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 62
D + E + CE + L + + R G + A+V P+G +G I+ + P
Sbjct: 84 DKRIDEXIKACETVIGLKDPVGEVIDSWVREDGLRI----ARVRV-PIGPIG-IIYESRP 137
Query: 63 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 122
+ +LA + SGN I+++ +A S I+ AL PE+ V+ I T
Sbjct: 138 NVTVETTILA-LKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIEN---T 193
Query: 123 GEALV-------SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD-VDV 174
+LV + +I G G+ + NA+ PV LE G + I D+ D+
Sbjct: 194 DRSLVLEXIRLREYLSLVIPRGGYGLISFVRDNAT---VPV-LETGVGNCHIFVDESADL 249
Query: 175 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 210
+ + A Q G C AE+ VH I F+
Sbjct: 250 KKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFL 284
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 78/201 (38%), Gaps = 10/201 (4%)
Query: 51 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 110
GV I ++N+P ++ A+ SG +++K + +W R++ + A P
Sbjct: 151 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAW---LTQRMVADVVDAGILPP 207
Query: 111 NLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNAS--KTLTPVTLELGGKDAFIV 168
+ +I G + + S D + F GS + + + + + +E ++ I+
Sbjct: 208 GALSIICGSSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSAIL 267
Query: 169 CDDV--DVPH---VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
C D D P + VR SGQ C R +V + + + ++ G
Sbjct: 268 CADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVG 327
Query: 224 PPLAGKYDMGALCLLEHSEKL 244
P MG+L E E +
Sbjct: 328 NPRNDAVRMGSLVSREQYENV 348
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 110/295 (37%), Gaps = 22/295 (7%)
Query: 51 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 110
GV I ++N+P ++ A+ SG +++K + +W R++ + A P
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAW---LTQRMVADVVDAGILPP 209
Query: 111 NLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNAS--KTLTPVTLELGGKDAFIV 168
+ +I G + + S D + F GS + + + + + +E ++ I+
Sbjct: 210 GALSIICGSSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSAIL 269
Query: 169 CDDV--DVPH---VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
C D D P + VR SGQ C R +V + + + ++ G
Sbjct: 270 CADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVG 329
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG----HLSEGAVDQYFPPT 279
P MG+L E E + L A + +LA S P
Sbjct: 330 NPRNDAVRMGSLVSREQYENV--LAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHL 387
Query: 280 VIVNVNHTMKLMQE-EAFGPIMPIMKF--NTDEEVVKLAND---SRYGLGCAVFS 328
+VN L+ + E FGP+ + + TD + A+ +R G G V S
Sbjct: 388 FVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVAS 442
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 78/201 (38%), Gaps = 10/201 (4%)
Query: 51 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 110
GV I ++N+P ++ A+ SG +++K + +W R++ + A P
Sbjct: 153 GVALFINAFNFPSWGLWAKAAPALLSGVPVIVKPATATAW---LTQRMVADVVDAGILPP 209
Query: 111 NLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNAS--KTLTPVTLELGGKDAFIV 168
+ +I G + + S D + F GS + + + + + +E ++ I+
Sbjct: 210 GALSIICGSSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSAIL 269
Query: 169 CDDV--DVPH---VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
C D D P + VR SGQ C R +V + + + ++ G
Sbjct: 270 CADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVG 329
Query: 224 PPLAGKYDMGALCLLEHSEKL 244
P MG+L E E +
Sbjct: 330 NPRNDAVRMGSLVSREQYENV 350
>pdb|4GHK|A Chain A, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|B Chain B, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|C Chain C, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|D Chain D, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
Length = 444
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 20/229 (8%)
Query: 2 VDASLGEIMTTCEKITWLLSEGEKWLKP-----------EYRSSGRSMIHKKAKVEFHPL 50
+DA+ + +T +K + EG + + +YR SG + + PL
Sbjct: 84 LDAAFVDRLTLSDKALKTMVEGLRQVATLPDPIGEMSNLKYRPSGIQVGQMRV-----PL 138
Query: 51 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 110
GV+G I+ + P I L + SGN +++ A S ++I LA G P+
Sbjct: 139 GVIG-IIYESRPNVTIDAAALC-LKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQ 196
Query: 111 NLVDVITGFAETGEALVSSVDKIIFVGSPGVGR-MIMRNASKTLTPVTLELGGKDAFIVC 169
+ V V+ + ++ + + V P G+ +I R ++ P+ L G V
Sbjct: 197 DTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEARVPMIKHLDGICHVYVD 256
Query: 170 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 218
D V + A G C E V R I +S + ++ +
Sbjct: 257 DRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYR 304
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 110/301 (36%), Gaps = 34/301 (11%)
Query: 51 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 110
GV I ++N+P ++ A+ SG +++K + +W R++ + A P
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAW---LTQRMVADVVDAGILPP 209
Query: 111 NLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK------- 163
+ +I G + + S D + F GS + + P ++ G +
Sbjct: 210 GALSIICGSSAGLLDQIRSFDVVSFTGSADTAATLRAH------PAFVQRGARLNVQADS 263
Query: 164 -DAFIVCDDV--DVPH---VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 217
++ I+C D D P + VR SGQ C R +V + + +
Sbjct: 264 LNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKL 323
Query: 218 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG----HLSEGAVD 273
++ G P MG+L E E + L A + +LA S
Sbjct: 324 AKITVGNPRNDAVRMGSLVSREQYENV--LAGIAALREEAVLAYDSSAVPLIDADANIAA 381
Query: 274 QYFPPTVIVNVNHTMKLMQE-EAFGPIMPIMKF--NTDEEVVKLAND---SRYGLGCAVF 327
P +VN L+ + E FGP+ + + TD + A+ +R G G V
Sbjct: 382 CVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVA 441
Query: 328 S 328
S
Sbjct: 442 S 442
>pdb|1PSZ|A Chain A, Pneumococcal Surface Antigen Psaa
pdb|3ZTT|A Chain A, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
pdb|3ZTT|B Chain B, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
pdb|3ZTT|C Chain C, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
pdb|3ZTT|D Chain D, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
Length = 303
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 27/156 (17%)
Query: 145 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE--RFYVH 202
++ NA KT KD F V D VDV ++ GQN G E +++
Sbjct: 97 LVENAKKT--------ENKDYFAVSDGVDVIYL-----------EGQNEKGKEDPHAWLN 137
Query: 203 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 262
+ +F +AK +SA P + L E+++KL L ++ DK +I A
Sbjct: 138 LENGIIFAKNIAK---QLSAKDP--NNKEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEK 192
Query: 263 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 298
SEGA +YF V + ++ EE P
Sbjct: 193 KLIVTSEGAF-KYFSKAYGVPSAYIWEINTEEEGTP 227
>pdb|1V9P|A Chain A, Crystal Structure Of Nad+-Dependent Dna Ligase
pdb|1V9P|B Chain B, Crystal Structure Of Nad+-Dependent Dna Ligase
Length = 584
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 72 AAVFSGNGIVIKVSENASWSGCFYF-RIIQAALA----AVGAPENLVDVITGFAETGEAL 126
A F +G+V+K+ + A W Y R + ALA A L+DV+ TG
Sbjct: 280 ALPFEADGVVVKLDDLALWRELGYTARAPRFALAYKFPAEEKETRLLDVVFQVGRTGRVT 339
Query: 127 VSSVDKIIFVGSPGVGRMIMRNAS 150
V + +F+ V R+ + N S
Sbjct: 340 PVGVLEPVFIEGSEVSRVTLHNES 363
>pdb|3A8I|E Chain E, Crystal Structure Of Et-Ehred-5-Ch3-Thf Complex
pdb|3A8I|F Chain F, Crystal Structure Of Et-Ehred-5-Ch3-Thf Complex
pdb|3A8J|E Chain E, Crystal Structure Of Et-Ehred Complex
pdb|3A8J|F Chain F, Crystal Structure Of Et-Ehred Complex
pdb|3A8K|E Chain E, Crystal Structure Of Etd97n-Ehred Complex
pdb|3A8K|F Chain F, Crystal Structure Of Etd97n-Ehred Complex
pdb|3AB9|A Chain A, Crystal Structure Of Lipoylated E. Coli H-Protein (Reduced
Form)
Length = 129
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 172 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 226
VD+P V A S+G +CA AE DIYA ++ + ++S P L
Sbjct: 43 VDLPEVG------ATVSAGDDCAVAESVXAASDIYAPVSGEIVAVNDALSDSPEL 91
>pdb|3K1J|A Chain A, Crystal Structure Of Lon Protease From Thermococcus
Onnurineus Na1
pdb|3K1J|B Chain B, Crystal Structure Of Lon Protease From Thermococcus
Onnurineus Na1
Length = 604
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 109 PENLVDVITGFAETGEALVSSVDK---IIFVGSPGVGRMIMRNASKTLTPV-TLE 159
PE L+D + G E + ++ ++ ++ +G PG G+ ++ A L P TLE
Sbjct: 36 PEKLIDQVIGQEHAVEVIKTAANQKRHVLLIGEPGTGKSMLGQAMAELLPTETLE 90
>pdb|3A7A|B Chain B, Crystal Structure Of E. Coli Lipoate-protein Ligase A In
Complex With Octyl-amp And Apoh-protein
pdb|3A7A|D Chain D, Crystal Structure Of E. Coli Lipoate-protein Ligase A In
Complex With Octyl-amp And Apoh-protein
pdb|3A7L|A Chain A, Crystal Structure Of E. Coli Apoh-Protein
Length = 128
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 172 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 226
VD+P V A S+G +CA AE DIYA ++ + ++S P L
Sbjct: 42 VDLPEVG------ATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPEL 90
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 77/201 (38%), Gaps = 10/201 (4%)
Query: 51 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 110
GV I ++N+P ++ A+ SG +++K + +W R++ + A P
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAW---LTQRMVADVVDAGILPP 209
Query: 111 NLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNAS--KTLTPVTLELGGKDAFIV 168
+ +I G + + S D + F GS + + + + + +E ++ I+
Sbjct: 210 GALSIICGSSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSAIL 269
Query: 169 CDDV--DVPH---VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
C D D P + VR SGQ R +V + + + ++ G
Sbjct: 270 CADATPDTPAFDLFIKEVVREMTVKSGQKATAIRRAFVPEAALEPVLEALKAKLAKITVG 329
Query: 224 PPLAGKYDMGALCLLEHSEKL 244
P MG+L E E +
Sbjct: 330 NPRNDAVRMGSLVSREQYENV 350
>pdb|1DGS|A Chain A, Crystal Structure Of Nad+-Dependent Dna Ligase From T.
Filiformis
pdb|1DGS|B Chain B, Crystal Structure Of Nad+-Dependent Dna Ligase From T.
Filiformis
Length = 667
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 72 AAVFSGNGIVIKVSENASWSGCFYF-RIIQAALA----AVGAPENLVDVITGFAETGEAL 126
A F +G+V+K+ + W Y R + ALA A L+DV+ TG
Sbjct: 277 ALPFEADGVVLKLDDLTLWGELGYTARAPRFALAYKFPAEEKETRLLDVVFQVGRTGRVT 336
Query: 127 VSSVDKIIFVGSPGVGRMIMRNAS 150
V + +F+ V R+ + N S
Sbjct: 337 PVGVLEPVFIEGSEVSRVTLHNES 360
>pdb|3TTS|A Chain A, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|B Chain B, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|C Chain C, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|D Chain D, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|E Chain E, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|F Chain F, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTY|A Chain A, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|B Chain B, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|C Chain C, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|D Chain D, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|E Chain E, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|F Chain F, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
Length = 675
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 226 LAGKYDMGALCLLEHSEKLQNLVNDALD--KGAEILARGSFGH 266
L G Y G LC + H+E + L D KG +L R FG+
Sbjct: 537 LRGSYSCGILCDVIHAETAEVLAEYGADYYKGTPVLTRNKFGN 579
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,492,094
Number of Sequences: 62578
Number of extensions: 557020
Number of successful extensions: 1679
Number of sequences better than 100.0: 102
Number of HSP's better than 100.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1297
Number of HSP's gapped (non-prelim): 105
length of query: 456
length of database: 14,973,337
effective HSP length: 102
effective length of query: 354
effective length of database: 8,590,381
effective search space: 3040994874
effective search space used: 3040994874
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)