Query 012790
Match_columns 456
No_of_seqs 310 out of 2177
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 16:17:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012790.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012790hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 2.6E-92 8.7E-97 741.5 41.9 376 7-392 104-483 (490)
2 3sza_A Aldehyde dehydrogenase, 100.0 2.8E-91 9.6E-96 731.3 41.4 387 6-412 77-464 (469)
3 3ros_A NAD-dependent aldehyde 100.0 4.7E-90 1.6E-94 724.3 44.0 374 5-393 83-459 (484)
4 3iwj_A Putative aminoaldehyde 100.0 6.6E-90 2.3E-94 727.1 44.6 380 5-392 107-489 (503)
5 3pqa_A Lactaldehyde dehydrogen 100.0 1.1E-89 3.9E-94 721.7 41.5 372 5-393 91-465 (486)
6 3ed6_A Betaine aldehyde dehydr 100.0 3.4E-89 1.2E-93 723.1 44.6 379 5-392 129-510 (520)
7 3rh9_A Succinate-semialdehyde 100.0 2.6E-89 8.9E-94 721.8 42.8 376 5-393 106-485 (506)
8 3k2w_A Betaine-aldehyde dehydr 100.0 4.4E-89 1.5E-93 719.9 40.3 379 5-392 107-488 (497)
9 1bxs_A Aldehyde dehydrogenase; 100.0 2E-88 6.8E-93 714.8 43.4 374 4-391 118-495 (501)
10 3ifg_A Succinate-semialdehyde 100.0 1.1E-88 3.6E-93 714.5 41.1 373 5-390 107-482 (484)
11 1o04_A Aldehyde dehydrogenase, 100.0 1.2E-88 3.9E-93 716.4 41.4 373 5-391 118-494 (500)
12 3u4j_A NAD-dependent aldehyde 100.0 1.1E-88 3.7E-93 720.5 41.5 376 5-392 120-498 (528)
13 2j6l_A Aldehyde dehydrogenase 100.0 1.7E-88 5.9E-93 715.9 42.5 379 5-391 116-498 (500)
14 3r31_A BADH, betaine aldehyde 100.0 5.9E-89 2E-93 720.8 38.8 375 8-393 110-489 (517)
15 4e4g_A Methylmalonate-semialde 100.0 1.3E-88 4.3E-93 719.0 40.7 379 5-391 121-504 (521)
16 1a4s_A ALDH, betaine aldehyde 100.0 2.1E-88 7.3E-93 715.2 42.3 378 5-392 115-496 (503)
17 3prl_A NADP-dependent glyceral 100.0 1.8E-88 6.1E-93 715.7 41.3 371 5-392 106-483 (505)
18 3ek1_A Aldehyde dehydrogenase; 100.0 1.6E-88 5.6E-93 715.4 40.9 373 5-392 127-502 (504)
19 3qan_A 1-pyrroline-5-carboxyla 100.0 2.8E-88 9.7E-93 718.8 42.1 376 5-392 131-516 (538)
20 2o2p_A Formyltetrahydrofolate 100.0 3.4E-88 1.2E-92 715.0 42.4 374 7-391 136-516 (517)
21 3b4w_A Aldehyde dehydrogenase; 100.0 1.8E-88 6.1E-93 714.5 39.9 372 7-391 108-481 (495)
22 3etf_A Putative succinate-semi 100.0 1E-87 3.4E-92 704.7 44.4 374 5-392 86-461 (462)
23 4h7n_A Aldehyde dehydrogenase; 100.0 2.9E-88 9.9E-93 710.4 40.3 388 5-407 84-472 (474)
24 2imp_A Lactaldehyde dehydrogen 100.0 6.6E-88 2.3E-92 708.6 42.5 374 5-391 101-478 (479)
25 4f3x_A Putative aldehyde dehyd 100.0 2.7E-88 9.2E-93 713.3 38.2 372 6-391 121-496 (498)
26 2d4e_A 5-carboxymethyl-2-hydro 100.0 1.8E-87 6.1E-92 710.1 44.5 378 5-392 121-505 (515)
27 3i44_A Aldehyde dehydrogenase; 100.0 3.3E-87 1.1E-91 704.8 43.6 369 7-389 123-495 (497)
28 1wnd_A Putative betaine aldehy 100.0 1.8E-87 6E-92 706.6 41.4 372 5-391 117-494 (495)
29 3jz4_A Succinate-semialdehyde 100.0 3.9E-87 1.3E-91 703.1 43.8 374 5-391 104-480 (481)
30 1uxt_A Glyceraldehyde-3-phosph 100.0 1.9E-87 6.6E-92 707.7 40.2 373 5-392 112-492 (501)
31 3r64_A NAD dependent benzaldeh 100.0 4.8E-87 1.7E-91 706.1 42.3 374 5-393 107-486 (508)
32 2w8n_A Succinate-semialdehyde 100.0 3E-87 1E-91 704.3 39.5 373 5-391 105-485 (487)
33 1uzb_A 1-pyrroline-5-carboxyla 100.0 1.7E-86 5.7E-91 703.2 44.3 375 5-391 131-515 (516)
34 3lns_A Benzaldehyde dehydrogen 100.0 7.6E-87 2.6E-91 696.7 41.0 367 7-391 88-456 (457)
35 2ve5_A BADH, betaine aldehyde 100.0 9.2E-87 3.2E-91 702.0 41.9 376 7-392 104-483 (490)
36 1euh_A NADP dependent non phos 100.0 3.2E-86 1.1E-90 695.1 40.4 368 5-391 97-473 (475)
37 4dng_A Uncharacterized aldehyd 100.0 3.5E-86 1.2E-90 696.8 39.5 374 5-392 101-478 (485)
38 1t90_A MMSDH, probable methylm 100.0 5.9E-86 2E-90 694.6 39.9 375 5-391 100-479 (486)
39 3ty7_A Putative aldehyde dehyd 100.0 4.3E-86 1.5E-90 694.9 36.9 368 6-389 104-474 (478)
40 4e3x_A Delta-1-pyrroline-5-car 100.0 1.2E-84 4E-89 692.9 41.1 386 6-410 159-562 (563)
41 3ju8_A Succinylglutamic semial 100.0 1.8E-82 6.2E-87 668.7 38.4 368 5-392 99-471 (490)
42 4f9i_A Proline dehydrogenase/d 100.0 1.3E-81 4.3E-86 704.2 43.1 377 4-392 624-1010(1026)
43 2y53_A Aldehyde dehydrogenase 100.0 1.6E-81 5.6E-86 667.9 35.4 382 5-393 101-520 (534)
44 3haz_A Proline dehydrogenase; 100.0 7E-80 2.4E-84 688.7 43.0 373 4-392 606-987 (1001)
45 3v4c_A Aldehyde dehydrogenase 100.0 9.3E-80 3.2E-84 653.6 33.4 369 5-389 120-515 (528)
46 1ez0_A ALDH, aldehyde dehydrog 100.0 4.4E-79 1.5E-83 645.9 35.5 367 5-389 87-480 (510)
47 1vlu_A Gamma-glutamyl phosphat 100.0 6.7E-74 2.3E-78 599.4 23.7 342 6-392 77-440 (468)
48 3k9d_A LMO1179 protein, aldehy 100.0 1.2E-72 4.2E-77 590.4 26.9 351 16-391 74-448 (464)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 1.2E-72 4.2E-77 589.1 26.0 333 5-392 97-435 (463)
50 4ghk_A Gamma-glutamyl phosphat 100.0 8.4E-71 2.9E-75 573.3 26.8 331 8-392 98-439 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 1.1E-70 3.8E-75 569.8 26.9 330 7-392 85-422 (427)
52 3my7_A Alcohol dehydrogenase/a 100.0 1.8E-66 6.3E-71 542.0 24.2 321 41-391 95-448 (452)
53 1kae_A HDH, histidinol dehydro 97.1 0.28 9.6E-06 49.4 25.7 280 12-388 84-392 (434)
54 4gic_A HDH, histidinol dehydro 96.9 0.45 1.5E-05 47.8 27.2 254 40-388 120-399 (423)
55 2fiu_A Conserved hypothetical 75.4 6.3 0.00022 31.2 6.2 59 237-319 16-75 (99)
56 1b93_A Protein (methylglyoxal 60.5 8.8 0.0003 33.0 4.4 116 48-190 8-135 (152)
57 3lo3_A Uncharacterized conserv 56.6 46 0.0016 25.7 7.7 61 236-320 14-75 (94)
58 1vmd_A MGS, methylglyoxal synt 47.6 10 0.00035 33.4 2.7 120 44-190 20-151 (178)
59 2yvq_A Carbamoyl-phosphate syn 44.5 16 0.00056 30.7 3.5 58 103-160 63-132 (143)
60 2xw6_A MGS, methylglyoxal synt 36.6 10 0.00036 31.8 1.0 55 106-160 48-112 (134)
61 3hhl_A RPA0582; alpha-beta-bar 36.2 94 0.0032 26.1 7.0 64 234-318 44-108 (143)
62 1s7i_A Hypothetical protein PA 35.9 98 0.0034 25.2 6.9 74 239-321 30-108 (124)
63 2ec4_A FAS-associated factor 1 30.7 27 0.00094 30.5 2.8 49 293-341 25-77 (178)
64 1hqk_A 6,7-dimethyl-8-ribityll 30.6 2.3E+02 0.0077 24.1 8.5 84 97-181 32-128 (154)
65 2v9v_A Selenocysteine-specific 26.9 82 0.0028 25.4 5.0 80 180-262 36-124 (135)
66 1gvf_A Tagatose-bisphosphate a 26.4 2.8E+02 0.0097 26.0 9.2 91 70-161 35-136 (286)
67 1rvv_A Riboflavin synthase; tr 25.7 2.5E+02 0.0084 23.9 7.8 84 97-181 32-128 (154)
68 3nq4_A 6,7-dimethyl-8-ribityll 23.6 3.4E+02 0.012 23.1 9.4 85 97-181 32-129 (156)
69 3v42_A Folliculin; tumor suppr 23.4 52 0.0018 30.1 3.2 66 66-141 20-86 (226)
70 1c2y_A Protein (lumazine synth 22.8 3.5E+02 0.012 22.9 9.2 84 97-181 33-128 (156)
71 2zfz_A Arginine repressor; DNA 20.3 2E+02 0.0067 21.3 5.5 37 76-120 20-56 (79)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.6e-92 Score=741.54 Aligned_cols=376 Identities=29% Similarity=0.474 Sum_probs=347.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 86 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 86 (456)
.|+..+++.++|+++.++++... ..+. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus 104 ~~v~~~~~~~~~~a~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse 179 (490)
T 2wme_A 104 VDIVTGADVLEYYAGLVPAIEGE-QIPL---RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 179 (490)
T ss_dssp THHHHHHHHHHHHHHHGGGCCEE-EEEE---ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHhccccccCc-cccc---cCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCc
Confidence 36889999999999988775432 2221 1245678999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHH-HhhccCCcccccCCC
Q 012790 87 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR-NASKTLTPVTLELGG 162 (456)
Q Consensus 87 ~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~-~aa~~~~pv~lElgG 162 (456)
.+|+++.++++++. ++|+|+|++|+|+|++ ++++.|++ +||+|+||||+.+|++|++ .+++++||++|||||
T Consensus 180 ~tp~ta~~l~~l~~----eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGG 255 (490)
T 2wme_A 180 VTPLTALKLAEIYT----EAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGG 255 (490)
T ss_dssp TSCHHHHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCC
T ss_pred CCHHHHHHHHHHHH----HhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCC
Confidence 99999999988865 6899999999999976 78999998 8999999999999998876 557789999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|+|++|+|||++++|+|+++|+++++++++|||.++++++||+++++|++
T Consensus 256 k~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~ 335 (490)
T 2wme_A 256 KSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHME 335 (490)
T ss_dssp CCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHH
T ss_pred cCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++.++|++++++|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 336 rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL 415 (490)
T 2wme_A 336 SVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGL 415 (490)
T ss_dssp HHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCS
T ss_pred HHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCC
Confidence 99999999999999999999865443345799999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|++||++||++||+.|+|+++.
T Consensus 416 ~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~--~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~ 483 (490)
T 2wme_A 416 AAGVVTQDLARAHRAIHRLEAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp EEEEECSBHHHHHHHHHHSCCSEEEESCCSCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred eEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCC--CCCCCcccccccccCchhHHHHHHHhhceeEEEEEC
Confidence 99999999999999999999999999986543 356999999999999999999999999999999875
No 2
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=2.8e-91 Score=731.33 Aligned_cols=387 Identities=28% Similarity=0.477 Sum_probs=354.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++++++|++++.........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 77 ~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps 156 (469)
T 3sza_A 77 YEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPS 156 (469)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECC
Confidence 35888899999999999999987665433322234568899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcc
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 164 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~ 164 (456)
+.+|+++.++++++.+ + +|+|++|+|+|+++.+..|+. ++|+|+||||+++|+.|+++|++++||+++||||||
T Consensus 157 ~~tp~t~~~l~~l~~~----a-lP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~ 231 (469)
T 3sza_A 157 ELSENMASLLATIIPQ----Y-LDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKS 231 (469)
T ss_dssp TTSHHHHHHHHHHHHH----H-SCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCChHHHHHHHHHHHH----h-CCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCC
Confidence 9999999999998764 4 999999999998777778888 999999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHH
Q 012790 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 244 (456)
Q Consensus 165 p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v 244 (456)
|+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++ +|+|.++++++||+++++|++++
T Consensus 232 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv 310 (469)
T 3sza_A 232 PCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRV 310 (469)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHH
T ss_pred ceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998 59999999999999999999999
Q ss_pred HHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCcee
Q 012790 245 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 324 (456)
Q Consensus 245 ~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~ 324 (456)
.++| +|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 311 ~~~i-----~ga~v~~GG~~-----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa 380 (469)
T 3sza_A 311 MGLI-----EGQKVAYGGTG-----DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLAL 380 (469)
T ss_dssp HHHH-----TTSEEEECCCE-----ETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEE
T ss_pred HHHH-----cCCEEEeCCcc-----CCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceE
Confidence 9998 58999999973 3468999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcccccccccCCCCC
Q 012790 325 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKP 404 (456)
Q Consensus 325 ~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~~~~~~~~~~~~ 404 (456)
||||+|.++++++++++++|+|+||++..+...+.+||||+|+||+|+++|.+||++||+.|+|+.++++. ....+
T Consensus 381 ~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~----~~~~~ 456 (469)
T 3sza_A 381 YMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMN----DEGLK 456 (469)
T ss_dssp EEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSC----CGGGG
T ss_pred EEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCccc----ccccc
Confidence 99999999999999999999999999876555667999999999999999999999999999999988642 11245
Q ss_pred CCCCCCcc
Q 012790 405 IQYPVAEN 412 (456)
Q Consensus 405 ~~~p~~~~ 412 (456)
++|||+..
T Consensus 457 ~~yppy~~ 464 (469)
T 3sza_A 457 VRYPPSPA 464 (469)
T ss_dssp GGSSSCCC
T ss_pred cccCCCCc
Confidence 77887543
No 3
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=4.7e-90 Score=724.25 Aligned_cols=374 Identities=28% Similarity=0.452 Sum_probs=351.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++++++|+++..... .+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 83 a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 158 (484)
T 3ros_A 83 SKEEVELCVSICNYYADHGPEMLKPTKLNS----DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKH 158 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCEEECC----TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCeeccC----CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 457999999999999999999987754332 2457899999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.++ |++ ++|+|+||||+++|+.|+++|++++||+++|||
T Consensus 159 s~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELG 233 (484)
T 3ros_A 159 AHNVPGSAALTAKIIK----RAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELG 233 (484)
T ss_dssp CTTCHHHHHHHHHHHH----HHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCChHHHHHHHHHHH----HhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecC
Confidence 9999999998888765 6899999999999987 4566 887 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||+++++++
T Consensus 234 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~ 313 (484)
T 3ros_A 234 GNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAK 313 (484)
T ss_dssp CCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHH
T ss_pred CCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 314 ~rv~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~G 389 (484)
T 3ros_A 314 EKLEAQVKEAIDAGAKVFYQYPEI----DSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYG 389 (484)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCC----CCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHHcCCeEEecCCcC----CCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCC
Confidence 999999999999999999999742 3579999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEccc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 393 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~ 393 (456)
|++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|+++|++||++||+.|+|+.+..
T Consensus 390 L~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 390 LGSSVIGSDIDRAKKVSAQIETGMTVINGRWIT--SGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp SCEEEECSCHHHHHHHHHHSCSSCCEETSCCCC--CTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred cEEEEECCCHHHHHHHHHhCccceEEECCCCCC--CCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence 999999999999999999999999999996432 4569999999999999999999999999999998764
No 4
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=6.6e-90 Score=727.15 Aligned_cols=380 Identities=32% Similarity=0.509 Sum_probs=351.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++++.++...+......+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 107 a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 186 (503)
T 3iwj_A 107 AAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKP 186 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEEC
Confidence 45699999999999999999887544222111112456799999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++|++++||++||||
T Consensus 187 s~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~~v~lElG 262 (503)
T 3iwj_A 187 SELASLTCLELGEICK----EVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELG 262 (503)
T ss_dssp CTTSCHHHHHHHHHHH----HHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGGGTCCEEEECC
T ss_pred CCcchHHHHHHHHHHH----HhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhcCCCCEEEECC
Confidence 9999999999888764 6899999999999976 77889987 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||+++++|+
T Consensus 263 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 342 (503)
T 3iwj_A 263 GKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQY 342 (503)
T ss_dssp CCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHH
T ss_pred CCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.++|++++++|+++++||.... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 343 ~~v~~~i~~a~~~Ga~v~~gG~~~~--~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~g 420 (503)
T 3iwj_A 343 EKILKFVSNAKSEGATILTGGSRPE--HLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYG 420 (503)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSCCT--TCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCC
T ss_pred HHHHHHHHHHHHCCCEEEecCCCCc--cCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCC
Confidence 9999999999999999999997421 11479999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|++||.+||++||+.|+|+.+.
T Consensus 421 L~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~ 489 (503)
T 3iwj_A 421 LGAAVISNDLERCERVTKAFKAGIVWVNCSQPC--FTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYI 489 (503)
T ss_dssp SEEEEECSCHHHHHHHHHHCCSSEEEESSSCCC--CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred cEEEEECCCHHHHHHHHHhCCcceEEEcCCCCC--CCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEeC
Confidence 999999999999999999999999999986432 456999999999999999999999999999998864
No 5
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=1.1e-89 Score=721.68 Aligned_cols=372 Identities=28% Similarity=0.459 Sum_probs=350.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++++++|..+. .+.+ +...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 91 a~~Ev~~~~~~~~~~a~~~~~~~~~~-~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 165 (486)
T 3pqa_A 91 ARVEVERSIGTFKLAAFYVKEHRDEV-IPSD----DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHP 165 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCEEE-ECCT----TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCce-ecCC----CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 45799999999999999999986543 2221 456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++.+++.++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|++.|+ +||+++|||
T Consensus 166 s~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~~v~lELG 243 (486)
T 3pqa_A 166 SSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELG 243 (486)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SSEEEEECC
T ss_pred CCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CCceeeccC
Confidence 999999999999999999999999999999999976 56899987 8999999999999999999988 899999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||+++++++
T Consensus 244 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 323 (486)
T 3pqa_A 244 GVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHA 323 (486)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHH
T ss_pred CcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.++|++++++|+++++||. ..|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|+++||
T Consensus 324 ~~v~~~i~~a~~~Ga~v~~gG~-------~~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~g 394 (486)
T 3pqa_A 324 EWVEKVVEKAIDEGGKLLLGGK-------RDKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYG 394 (486)
T ss_dssp HHHHHHHHHHHHTTCEEEECCC-------EETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCC
T ss_pred HHHHHHHHHHHHCCCEEEecCC-------CCCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCC
Confidence 9999999999999999999997 25899999999 9999999999999999999999999 9999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEccc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 393 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~ 393 (456)
|++||||+|.++++++++++++|+|+||++..+.. +.+||||+|+||+|++||++||++||+.|+|+.+..
T Consensus 395 L~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~-~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 395 LHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQ-DNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKA 465 (486)
T ss_dssp SEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCC-TTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred cEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCC-CCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCC
Confidence 99999999999999999999999999999866433 369999999999999999999999999999988754
No 6
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=3.4e-89 Score=723.13 Aligned_cols=379 Identities=31% Similarity=0.505 Sum_probs=351.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++++... ..+... .+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 129 a~~ev~~~~~~~~~~a~~~~~~~g~-~~~~~~--~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKP 205 (520)
T 3ed6_A 129 SYADMDDIHNVFMYFAGLADKDGGE-MIDSPI--PDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKP 205 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCEE-EECCSS--TTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCe-ecccCC--CCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEc
Confidence 4569999999999999999887543 222211 2456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+++|+.|++.|++++||++||||
T Consensus 206 s~~tp~t~~~l~~l~~----eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELG 281 (520)
T 3ed6_A 206 SEITPLTTIRVFELME----EVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELG 281 (520)
T ss_dssp CTTCCHHHHHHHHHHH----HHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHTTTCEEEEECC
T ss_pred CCcchHHHHHHHHHHH----HhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcC
Confidence 9999999999888865 6899999999999964 78999997 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++++++
T Consensus 282 Gk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~ 361 (520)
T 3ed6_A 282 GKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHR 361 (520)
T ss_dssp CCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHH
T ss_pred CCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++++++|++++++|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 362 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~G 441 (520)
T 3ed6_A 362 NKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYG 441 (520)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCC
T ss_pred HHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCC
Confidence 99999999999999999999985321111468999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|+++|++||++||+.|+|+.+.
T Consensus 442 L~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~ 510 (520)
T 3ed6_A 442 LAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY--FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNT 510 (520)
T ss_dssp SEEEEECSCHHHHHHHHHHSCCSEEEESCSCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEES
T ss_pred cEEEEECCCHHHHHHHHHHCCcceEEECCCCCC--CCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcC
Confidence 999999999999999999999999999998665 356999999999999999999999999999998764
No 7
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=2.6e-89 Score=721.82 Aligned_cols=376 Identities=30% Similarity=0.496 Sum_probs=350.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEE-ecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEe
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEF-HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 83 (456)
+..|+..+++.++|+++++++|.... .+.. .+...++++ +|+|||++|+|||||+.++++++++||++||+||+|
T Consensus 106 a~~ev~~~~~~l~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlK 181 (506)
T 3rh9_A 106 AQGEVDYAAGFFDYCAKHISALDSHT-IPEK---PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIK 181 (506)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGCCEE-CSCC---GGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc-cccC---CCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEE
Confidence 45799999999999999999986542 2222 345678889 999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccC
Q 012790 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 84 ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl 160 (456)
||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++|++++||+++||
T Consensus 182 ps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lEl 257 (506)
T 3rh9_A 182 PASETPLTMIAFFSVMD----KLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALEL 257 (506)
T ss_dssp CCTTSCHHHHHHHHHHT----TTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEEC
T ss_pred cCCccHHHHHHHHHHHH----HhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhcCCceEEec
Confidence 99999999999888865 6899999999999975 78899998 79999999999999999999999999999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||++++++
T Consensus 258 GGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~ 337 (506)
T 3rh9_A 258 GGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQG 337 (506)
T ss_dssp CCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHH
T ss_pred CCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
++++.++|++++++|+++++||...+ ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 338 ~~rv~~~i~~a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~ 414 (506)
T 3rh9_A 338 FDKVKRHLQDALDKGASLVAGKQPAE---LGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEF 414 (506)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCGGG---CCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEecCCcCC---CCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCC
Confidence 99999999999999999999997421 126899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEccc
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 393 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~ 393 (456)
||++||||+|.++++++++++++|+|+||++..+. +.+||||+|+||+|+++|++||++||+.|+|+.+..
T Consensus 415 gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~--~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~~ 485 (506)
T 3rh9_A 415 GLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPT--PEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFA 485 (506)
T ss_dssp CSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCC--TTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC--
T ss_pred CceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCC--CCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcCc
Confidence 99999999999999999999999999999986543 469999999999999999999999999999988753
No 8
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=4.4e-89 Score=719.86 Aligned_cols=379 Identities=28% Similarity=0.450 Sum_probs=349.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++|..+.. +.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 107 a~~ev~~~~~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 183 (497)
T 3k2w_A 107 AEMEVDVTATFIDYGCDNALTIEGDIL-PSD--NQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKP 183 (497)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCCEEEE-ECS--STTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccc-ccC--CCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEEC
Confidence 347999999999999999999875432 211 12456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|++.+++++||+++|||
T Consensus 184 s~~tp~t~~~l~~ll~----~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElG 259 (497)
T 3k2w_A 184 TQETPLATTELGRIAK----EAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELG 259 (497)
T ss_dssp CSSSCHHHHHHHHHHH----HTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECC
T ss_pred CCCChHHHHHHHHHHH----HhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcC
Confidence 9999999999888864 7899999999999965 78999998 799999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||+++++++
T Consensus 260 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~ 339 (497)
T 3k2w_A 260 GKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREI 339 (497)
T ss_dssp CCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHH
T ss_pred CCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.++|++++++|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 340 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~g 419 (497)
T 3k2w_A 340 DNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYG 419 (497)
T ss_dssp HHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEE
T ss_pred HHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCC
Confidence 99999999999999999999973111111268999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|++||||+|.++++++++++++|+|+||++..+. +.+||||+|+||+|+++|++||++||+.|+|+.+.
T Consensus 420 L~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~--~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 488 (497)
T 3k2w_A 420 LSAYVHTQSFANINQAISDLEVGEVYINRGMGEQ--HQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINE 488 (497)
T ss_dssp SEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC--TTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred cEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCC--CCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEc
Confidence 9999999999999999999999999999986653 56999999999999999999999999999998754
No 9
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=2e-88 Score=714.75 Aligned_cols=374 Identities=30% Similarity=0.492 Sum_probs=348.5
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEe
Q 012790 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83 (456)
Q Consensus 4 ~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 83 (456)
+...|+..+++.++|+++.+++|.++. .+.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+|
T Consensus 118 ~~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlK 193 (501)
T 1bxs_A 118 AYLMDLGGCIKTLRYCAGWADKIQGRT-IPMD---GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVK 193 (501)
T ss_dssp HHHTHHHHHHHHHHHHHHHGGGCCEEE-ECCS---SSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCe-eecc---CCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeecc
Confidence 334699999999999999999987642 2221 234568999999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhh-ccCCccccc
Q 012790 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLE 159 (456)
Q Consensus 84 ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa-~~~~pv~lE 159 (456)
||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++|+ +++||+++|
T Consensus 194 ps~~tp~t~~~l~~l~~----~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lE 269 (501)
T 1bxs_A 194 PAEQTPLTALHMGSLIK----EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLE 269 (501)
T ss_dssp CCTTCCHHHHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCccHHHHHHHHHHHH----HhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEe
Confidence 99999999999888764 6899999999999954 78999998 7999999999999999999999 999999999
Q ss_pred CCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHH
Q 012790 160 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 239 (456)
Q Consensus 160 lgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~ 239 (456)
||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++++
T Consensus 270 LGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~ 349 (501)
T 1bxs_A 270 LGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKE 349 (501)
T ss_dssp CCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHH
T ss_pred cCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
+++|++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 350 ~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~ 425 (501)
T 1bxs_A 350 QYEKILDLIESGKKEGAKLECGGGPW----GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTF 425 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEECSCCSEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCC
Confidence 99999999999999999999999731 23689999999999999999999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+|+++|++||++|++.|+|+.+
T Consensus 426 ~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~ 495 (501)
T 1bxs_A 426 YGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVV--SAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 495 (501)
T ss_dssp CCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCC--CCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEc
Confidence 99999999999999999999999999999987543 35699999999999999999999999999999875
No 10
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1.1e-88 Score=714.45 Aligned_cols=373 Identities=31% Similarity=0.544 Sum_probs=346.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++..++++... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 107 a~~ev~~~~~~l~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 183 (484)
T 3ifg_A 107 AKGEIAYAASFIEWFAEEGKRVAGD-TLPTP--DANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKP 183 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEE-EECCS--STTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCc-ccccc--CCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEEC
Confidence 4579999999999999988765322 11211 12456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|++++++++||+++|||
T Consensus 184 s~~tp~t~~~l~~l~~----~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElG 259 (484)
T 3ifg_A 184 AESTPFSALAMAFLAE----RAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELG 259 (484)
T ss_dssp CTTSCHHHHHHHHHHH----HHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECC
T ss_pred CCCCcHHHHHHHHHHH----HhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecC
Confidence 9999999998888764 6899999999999975 78999998 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++++++
T Consensus 260 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~ 339 (484)
T 3ifg_A 260 GNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAV 339 (484)
T ss_dssp CCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHH
T ss_pred CCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 340 ~~v~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~G 415 (484)
T 3ifg_A 340 KKVESHIADALAKGASLMTGGKRH----ALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFG 415 (484)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSBC----TTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEE
T ss_pred HHHHHHHHHHHHCCCEEEECCCcc----CCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCC
Confidence 999999999999999999999742 2368999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEE
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~ 390 (456)
|++||||+|.++++++++++++|+|+||+... ..+.+||||+|+||+|+++|++||++||+.|+|+.
T Consensus 416 L~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~ 482 (484)
T 3ifg_A 416 LAAYLYSRDIGRVWRVAEALEYGMVGINTGLI--SNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCV 482 (484)
T ss_dssp SEEEEECCBHHHHHHHHHHCCCSEEEESCSCC--CCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEE
T ss_pred ceEEEECCCHHHHHHHHHhCCcceEEEcCCCC--CCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999998643 24569999999999999999999999999999975
No 11
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=1.2e-88 Score=716.38 Aligned_cols=373 Identities=32% Similarity=0.491 Sum_probs=348.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
...|+..+++.++|+++++++|.++. .+.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 118 ~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 193 (500)
T 1o04_A 118 YLVDLDMVLKCLRYYAGWADKYHGKT-IPID---GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKV 193 (500)
T ss_dssp HHTHHHHHHHHHHHHHHHTTTCCEEE-ECCS---SSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCcc-eecC---CCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEEC
Confidence 34699999999999999999987642 2221 2345689999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhh-ccCCcccccC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLEL 160 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa-~~~~pv~lEl 160 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++|+ +++||+++||
T Consensus 194 s~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lEL 269 (500)
T 1o04_A 194 AEQTPLTALYVANLIK----EAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLEL 269 (500)
T ss_dssp CTTSCHHHHHHHHHHH----HHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CccChHHHHHHHHHHH----HhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEc
Confidence 9999999999888764 6899999999999954 78999998 7999999999999999999999 9999999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++
T Consensus 270 GGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~ 349 (500)
T 1o04_A 270 GGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQ 349 (500)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHH
T ss_pred CCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
+++++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 350 ~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~ 425 (500)
T 1o04_A 350 FKKILGYINTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTY 425 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCC
Confidence 9999999999999999999999741 236899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+|++||.+||++|++.|+|+.+
T Consensus 426 gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~ 494 (500)
T 1o04_A 426 GLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVF--GAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494 (500)
T ss_dssp CSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCC--CTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred CceEEEECCCHHHHHHHHHhCCeeEEEECCCCCC--CCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEe
Confidence 9999999999999999999999999999987542 35699999999999999999999999999999875
No 12
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.1e-88 Score=720.47 Aligned_cols=376 Identities=30% Similarity=0.464 Sum_probs=350.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++|.. +..+... .+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 120 a~~ev~~~~~~l~~~a~~~~~~~~-~~~~~~~--~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 196 (528)
T 3u4j_A 120 ARGEIGFCADLWSYAAGQARALEG-QTHNNIG--DDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKP 196 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCE-EEECCSC--TTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-eeeccCC--CCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEc
Confidence 367999999999999999998863 2223221 2456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ +||+|+||||+++|+.|+++|++++||++||||
T Consensus 197 s~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lELG 272 (528)
T 3u4j_A 197 SEFTSGTSIRLAELAR----EAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELG 272 (528)
T ss_dssp CTTCCHHHHHHHHHHH----HHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECC
T ss_pred CCccHHHHHHHHHHHH----HhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHhcCCceEEecC
Confidence 9999999999988865 6899999999999954 78999998 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||+++++++
T Consensus 273 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~ 352 (528)
T 3u4j_A 273 GKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHA 352 (528)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHH
T ss_pred CCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.++|++++++|+++++||.... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 353 ~rv~~~i~~a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~G 429 (528)
T 3u4j_A 353 EKVHSYVTAGITSGAELLLGGERIG---REAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFG 429 (528)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSEEC---TTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHHCCCEEEeCCCcCC---CCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCC
Confidence 9999999999999999999997421 1169999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|++||++||++||+.|+|+.+.
T Consensus 430 L~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 498 (528)
T 3u4j_A 430 LSASVWSTNLETALQTIRRIRAGRCWINSVIDG--TPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTL 498 (528)
T ss_dssp SEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC--CTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEES
T ss_pred cEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCC--CCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeC
Confidence 999999999999999999999999999997543 456999999999999999999999999999998864
No 13
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1.7e-88 Score=715.88 Aligned_cols=379 Identities=24% Similarity=0.370 Sum_probs=351.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++++++++... ..+.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 116 a~~ev~~~~~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 192 (500)
T 2j6l_A 116 GVGEVQEYVDICDYAVGLSRMIGGP-ILPSE--RSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKG 192 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCCB-EECCS--STTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc-ccccc--CCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEEC
Confidence 3679999999999999988776432 11111 01234578899999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++.++++++.++|.++|+|+|++|+|+|+.+.++.|++ ++|+|+||||+++|+.|+++|+++++|++|||||
T Consensus 193 s~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGG 272 (500)
T 2j6l_A 193 APTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGG 272 (500)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCC
Confidence 99999999999999999999999999999999996678999997 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||++++++++
T Consensus 273 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~ 352 (500)
T 2j6l_A 273 NNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVS 352 (500)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHH
T ss_pred CCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
+++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 353 rv~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL 428 (500)
T 2j6l_A 353 MFLGAVEEAKKEGGTVVYGGKVM----DRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGL 428 (500)
T ss_dssp HHHHHHHHHHHTTCEEEECCSBC----SSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCS
T ss_pred HHHHHHHHHHHCCCEEEECCccc----CCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCc
Confidence 99999999999999999999742 23689999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHH--HhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 323 GCAVFSGSQHRAREIA--AQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~--~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
++||||+|.+++++++ .++++|+|+||+.... ..+.+||||+|+||+|++||.+|+++|++.|+|+.+
T Consensus 429 ~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 498 (500)
T 2j6l_A 429 SSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSG-AEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTIN 498 (500)
T ss_dssp EEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTC-CCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred EEEEECCCHHHHHHHHhhccCCeeEEEECCCCcc-CCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence 9999999999999999 7799999999986543 234689999999999999999999999999999764
No 14
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=5.9e-89 Score=720.84 Aligned_cols=375 Identities=30% Similarity=0.450 Sum_probs=347.9
Q ss_pred HHHHHHHHHHHHHHhhhh---hhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 8 EIMTTCEKITWLLSEGEK---WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 8 Ei~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
|+..+++.++|+++.+++ |+..+..+.. .+. .+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 110 ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~---~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 185 (517)
T 3r31_A 110 IVADPTSGADAFEFFGGIAPSALNGDYIPLG---GDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKP 185 (517)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHTCCCEEECS---SSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHhhhccccccCcccccC---CCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEc
Confidence 888999999999998876 5554433321 234 889999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|+.+.+++|++ +||+|+||||+++|+.|+++|++++||+++||||
T Consensus 186 s~~tp~t~~~l~~ll~----eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGG 261 (517)
T 3r31_A 186 SENTPLGALKIAEILI----EAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGG 261 (517)
T ss_dssp CTTSCSHHHHHHHHHH----HTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CcccHHHHHHHHHHHH----HhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCC
Confidence 9999999999888865 689999999999996688999998 7999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||++++++++
T Consensus 262 k~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~ 341 (517)
T 3r31_A 262 KSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQE 341 (517)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHH
T ss_pred cCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++.++|++++++|+++++|| .........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 342 rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL 420 (517)
T 3r31_A 342 KVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGL 420 (517)
T ss_dssp HHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEES
T ss_pred HHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCe
Confidence 99999999999999999999 31111124699999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEccc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 393 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~ 393 (456)
++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|+++|++||++||+.|+|+.+..
T Consensus 421 aa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 489 (517)
T 3r31_A 421 AGGVFTADLARAHRVVDGLEAGTLWINTYNLC--PVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTG 489 (517)
T ss_dssp EEEEECSCHHHHHHHHHHSCCSEEEESSCCCC--CTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECCC
T ss_pred eEEEEeCCHHHHHHHHHHCCcceEEECCCCCC--CCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcCC
Confidence 99999999999999999999999999997543 4569999999999999999999999999999988653
No 15
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.3e-88 Score=718.95 Aligned_cols=379 Identities=21% Similarity=0.355 Sum_probs=348.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++..+ ++..+..+. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 121 a~~Ev~~~~~~l~~~a~~~~-~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 197 (521)
T 4e4g_A 121 AKGDIVRGLEVCEFVIGIPH-LQKSEFTEG--AGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKP 197 (521)
T ss_dssp HHHHHHHHHHHHHHHHTHHH-HTCEEEEEE--EETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHH-HhcCccccc--CCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 45799999999999987654 444332211 112345789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|+.+.+++|++ +||+|+||||+++|+.|+++|++++||+++||||
T Consensus 198 se~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGG 273 (521)
T 4e4g_A 198 SERDPSVPIRLAELMI----EAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGA 273 (521)
T ss_dssp CTTSTHHHHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCcchHHHHHHHHHHH----HhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCC
Confidence 9999999999888865 689999999999998888889987 7999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehh-hHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
|||+||++|||++.|++.+++++|.|+||.|+|++|||||++ ++|+|+++|+++++++++|+|.++++++||+++++++
T Consensus 274 k~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~ 353 (521)
T 4e4g_A 274 KNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAE 353 (521)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHH
T ss_pred CCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHH
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.++|++++++|+++++||.....+.+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 354 ~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~g 433 (521)
T 4e4g_A 354 QRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYG 433 (521)
T ss_dssp HHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEE
T ss_pred HHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCC
Confidence 99999999999999999999974322223579999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC--CcchHHHHhccceeeEEEEc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G--~~~g~~gl~~ft~~k~v~~~ 391 (456)
|++||||+|.++++++++++++|+|+||++.. ...+.+||||+|+||+| ++||++||++||+.|+|+.+
T Consensus 434 Laa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~ 504 (521)
T 4e4g_A 434 NGVAIYTRDGDAARDFASRINIGMVGVNVPIP-VPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504 (521)
T ss_dssp SEEEEECSBHHHHHHHHHHCCCSEEEESCSSC-CCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEEC
T ss_pred eEEEEECCCHHHHHHHHHhCCeeeEEECCCCC-CCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEe
Confidence 99999999999999999999999999999753 33356999999999999 79999999999999999875
No 16
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=2.1e-88 Score=715.23 Aligned_cols=378 Identities=31% Similarity=0.494 Sum_probs=349.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++++++|.. +..+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 115 a~~ev~~~~~~~~~~a~~~~~~~g-~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 190 (503)
T 1a4s_A 115 AEYDIDAAWQCIEYYAGLAPTLSG-QHIQLP---GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKP 190 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCCE-EEEECG---GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CcccCC---CCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 457999999999999999998865 222222 2346789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|+++.+++|++ ++|+|+||||+.+|+.|+++|++++||+++||||
T Consensus 191 s~~tp~ta~~l~~l~~----~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGG 266 (503)
T 1a4s_A 191 SPMTPVTGVILAEIFH----EAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGG 266 (503)
T ss_dssp CTTSCHHHHHHHHHHH----HTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCC
T ss_pred CCCChHHHHHHHHHHH----HhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCC
Confidence 9999999999988865 789999999999996577889987 7999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++++
T Consensus 267 k~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~ 346 (503)
T 1a4s_A 267 KSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLD 346 (503)
T ss_dssp CCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHH
T ss_pred cCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCC--CCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSE--GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
+++++|++++++|+++++||....... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 347 rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~ 426 (503)
T 1a4s_A 347 KVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTF 426 (503)
T ss_dssp HHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCC
Confidence 999999999999999999997421000 035899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
||++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|++||++||++||+.|+|+.+.
T Consensus 427 gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 427 GLASGVFTRDISRAHRVAANLEAGTCYINTYSIS--PVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp CSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCC--CTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred CceEEEECCCHHHHHHHHHHCceeEEEECCCCCC--CCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEcc
Confidence 9999999999999999999999999999997553 356999999999999999999999999999998753
No 17
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=1.8e-88 Score=715.73 Aligned_cols=371 Identities=31% Similarity=0.503 Sum_probs=345.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccc----cccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeE
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI----HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGI 80 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~V 80 (456)
+..|+..+++.++|+++++++|.... .+... .. +...+++++|+|||++|+|||||+.+.++++++||++||+|
T Consensus 106 a~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~-~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~V 183 (505)
T 3prl_A 106 AIGEVSRTADIIRHTADEALRLNGET-LKGDQ-FKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTV 183 (505)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEE-EEGGG-STTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc-ccccc-cccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEE
Confidence 45699999999999999999876432 11110 01 34578999999999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCccc
Q 012790 81 VIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVT 157 (456)
Q Consensus 81 vlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~ 157 (456)
|+|||+.+|+++.++++++ .++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++|+ +||++
T Consensus 184 VlKpse~tp~ta~~l~~ll----~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~~v~ 257 (505)
T 3prl_A 184 VFKPATQGSLSGIKMVEAL----ADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVV 257 (505)
T ss_dssp EEEECSTTHHHHHHHHHHH----HHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC--SSCEE
T ss_pred EEECCCCChHHHHHHHHHH----HHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc--CCcEE
Confidence 9999999999998888775 47999999999999965 78899987 8999999999999999999998 99999
Q ss_pred ccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccC
Q 012790 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 237 (456)
Q Consensus 158 lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~ 237 (456)
+|||||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|. +++++||+++
T Consensus 258 lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~ 336 (505)
T 3prl_A 258 LELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPE-DDADITPVID 336 (505)
T ss_dssp EECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT-TTCSBCCCSC
T ss_pred EECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCC-CcCcCCcccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhc
Q 012790 238 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 317 (456)
Q Consensus 238 ~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~ 317 (456)
+++++++.++|++++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus 337 ~~~~~rv~~~i~~a~~~Ga~v~~gG~-------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~ 409 (505)
T 3prl_A 337 EKSAAFIQGLIDDALENGATLLSGNK-------RQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQ 409 (505)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEECCC-------EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCEEEecCC-------CCCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999997 25899999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 318 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 318 ~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
++|||++||||+|.++++++++++++|+|+||++.... .+.+||||+|+||+|++||++||++||+.|+|+.+.
T Consensus 410 ~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~-~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~ 483 (505)
T 3prl_A 410 SDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERG-PDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNL 483 (505)
T ss_dssp SSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSC-STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred CCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCC-CCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeC
Confidence 99999999999999999999999999999999986533 456999999999999999999999999999998864
No 18
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.6e-88 Score=715.39 Aligned_cols=373 Identities=28% Similarity=0.502 Sum_probs=346.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++..++++.... .+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 127 a~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKP 203 (504)
T 3ek1_A 127 ARGEVLYAASFIEWFAEEAKRVYGDT-IPAP--QNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRP 203 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEE-ECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc-cccc--cccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 45699999999999999887653221 1211 12356789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ +||+|+||||+++|+.|++.+++++||+++|||
T Consensus 204 s~~tp~t~~~l~~l~~----eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELG 279 (504)
T 3ek1_A 204 ADLTPLTALALGVLAE----KAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELG 279 (504)
T ss_dssp CTTSCHHHHHHHHHHH----HTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECC
T ss_pred CCcChHHHHHHHHHHH----HhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCC
Confidence 9999999998888764 7899999999999975 78999998 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++++++
T Consensus 280 Gk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~ 359 (504)
T 3ek1_A 280 GNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAI 359 (504)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHH
T ss_pred CCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++++++|++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 360 ~~v~~~i~~a~~~Ga~v~~gG~~------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~G 433 (504)
T 3ek1_A 360 TKVKAHIEDAVSKGAKLITGGKE------LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFG 433 (504)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCE------EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHHCCCEEEeCCcc------CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCC
Confidence 99999999999999999999973 358999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|++||||+|.++++++++++++|+|+||+... ..+.+||||+|+||+|+++|++||++||+.|+|+.+.
T Consensus 434 L~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 434 LAAYFYTENFSRAIRVSEALEYGMVGHNTGLI--SNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp SEEEEECCBHHHHHHHHHHSCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred eEEEEEcCCHHHHHHHHHhCCcCeEEECCCCC--CCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 99999999999999999999999999998653 2456999999999999999999999999999998753
No 19
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=2.8e-88 Score=718.78 Aligned_cols=376 Identities=23% Similarity=0.410 Sum_probs=350.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++++.+|+.++..+.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 131 a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 207 (538)
T 3qan_A 131 ADADTAEAIDFLEYYARQMIELNRGKEILSR---PGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKP 207 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCBCCCCC---TTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCeeeccc---CCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 4569999999999999997777776654432 2456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhcc------CCc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT------LTP 155 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~------~~p 155 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|++.|+++ +||
T Consensus 208 s~~tp~ta~~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkp 283 (538)
T 3qan_A 208 ASTTPVVAAKFVEVLE----DAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKR 283 (538)
T ss_dssp CTTSHHHHHHHHHHHH----HTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCE
T ss_pred CCccHHHHHHHHHHHH----HhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcccccccccc
Confidence 9999999998888764 7899999999999965 78999997 899999999999999999999998 999
Q ss_pred ccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccc
Q 012790 156 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 235 (456)
Q Consensus 156 v~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl 235 (456)
+++|||||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||+
T Consensus 284 v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl 363 (538)
T 3qan_A 284 VIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPV 363 (538)
T ss_dssp EEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCC
T ss_pred EEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHH
Q 012790 236 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLA 315 (456)
Q Consensus 236 i~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~ 315 (456)
+++++++++.++|++++++| ++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 364 i~~~~~~rv~~~i~~a~~~G-~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~a 438 (538)
T 3qan_A 364 IDEKAFEKIMSYIEIGKKEG-RLMTGGEGD----SSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIA 438 (538)
T ss_dssp SCHHHHHHHHHHHHHHHHHS-EEEECCCEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHCC-eEEeCCCcC----CCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHH
Confidence 99999999999999999999 999999742 2269999999999999999999999999999999999999999999
Q ss_pred hcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeEEEEcc
Q 012790 316 NDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 316 n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|+++|||++||||+|.++++++++++++|+|+||+.......+.+||||+|+||+| ++||++||++||+.|+|+.+.
T Consensus 439 N~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~ 516 (538)
T 3qan_A 439 NNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMY 516 (538)
T ss_dssp HCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC
T ss_pred hcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEec
Confidence 99999999999999999999999999999999996444433467999999999999 999999999999999998864
No 20
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=3.4e-88 Score=715.02 Aligned_cols=374 Identities=28% Similarity=0.483 Sum_probs=346.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcc-cccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRS-MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
.|+..+++.++|+++.+++|.... .+.... ......+++++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 136 ~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps 214 (517)
T 2o2p_A 136 THVGMSIQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPA 214 (517)
T ss_dssp TTTHHHHHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECC
Confidence 689999999999999998876532 222100 112256899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhh-ccCCcccccCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELG 161 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa-~~~~pv~lElg 161 (456)
+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ +||+|+||||+++|+.|+++|+ +++||+++|||
T Consensus 215 ~~tp~ta~~l~~l~~----eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELG 290 (517)
T 2o2p_A 215 QVTPLTALKFAELTL----KAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELG 290 (517)
T ss_dssp TTCCHHHHHHHHHHH----HTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CccHHHHHHHHHHHH----HhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECC
Confidence 999999999888865 6899999999999965 77899988 8999999999999999999999 99999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|+|++|||||+++||+|+++|+++++++++|+|.++++++||+++++++
T Consensus 291 Gk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~ 370 (517)
T 2o2p_A 291 GKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHL 370 (517)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHH
T ss_pred CcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCC--HHHHHHHHhcCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLANDSR 319 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~--~~eai~~~n~~~ 319 (456)
+++.++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+| +||||+++|+++
T Consensus 371 ~~v~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~ 446 (517)
T 2o2p_A 371 RKLVEYCQRGVKEGATLVCGGNQV----PRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATE 446 (517)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHCCCEEEeccccC----CCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCC
Confidence 999999999999999999999742 13689999999999999999999999999999999999 999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
|||++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|+++|++||++||+.|+|+.+
T Consensus 447 ~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 447 FGLASGVFTRDINKALYVSDKLQAGTVFINTYNKT--DVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp CCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCC--CTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred CCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCC--CCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 99999999999999999999999999999987432 35699999999999999999999999999999763
No 21
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.8e-88 Score=714.52 Aligned_cols=372 Identities=32% Similarity=0.542 Sum_probs=346.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 86 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 86 (456)
.|+..+++.++|+++.+++|.+.. .+.+ .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus 108 ~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~ 183 (495)
T 3b4w_A 108 MHWMGSMGAMNYFAGAADKVTWTE-TRTG---SYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAA 183 (495)
T ss_dssp TTTHHHHHHHHHHHTCGGGSCSEE-EEEE---TTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCc-ccCC---CCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCC
Confidence 689999999999999999886532 2211 123568999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcc
Q 012790 87 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 164 (456)
Q Consensus 87 ~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~ 164 (456)
.+|+++.++++++. ++|+|+|++|+|+|+.+.+++|++ ++|+|+||||+++|+.|+++|++++||+++||||||
T Consensus 184 ~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGGk~ 259 (495)
T 3b4w_A 184 ETPLTANALAEVFA----EVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKS 259 (495)
T ss_dssp TSCHHHHHHHHHHH----HTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCE
T ss_pred ccHHHHHHHHHHHH----HhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceeecCCCcc
Confidence 99999999988875 689999999999995578999997 899999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHH
Q 012790 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 244 (456)
Q Consensus 165 p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v 244 (456)
|+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||++++++++++
T Consensus 260 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv 339 (495)
T 3b4w_A 260 AAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRV 339 (495)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHH
T ss_pred eEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCcee
Q 012790 245 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 324 (456)
Q Consensus 245 ~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~ 324 (456)
+++|++++++|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 340 ~~~i~~a~~~Ga~~~~gG~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a 417 (495)
T 3b4w_A 340 EGYIAKGIEEGARLVCGGGRPEG--LDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAG 417 (495)
T ss_dssp HHHHHHHHHTTCEEEECCSCCTT--CTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCC
T ss_pred HHHHHHHHhCCCEEEecCccccc--ccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEE
Confidence 99999999999999999974210 1258999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 325 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 325 ~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
||||+|.++++++++++++|+|+||++. ..+.+||||+|.||+|+++|++||++||+.|+|+.+
T Consensus 418 ~v~t~d~~~a~~~~~~l~aG~V~iN~~~---~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~ 481 (495)
T 3b4w_A 418 SVWTTDVPKGIKISQQIRTGTYGINWYA---FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLP 481 (495)
T ss_dssp EEECSCHHHHHHHHHHSCCSCCEESSCC---CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECC
T ss_pred EEECCCHHHHHHHHHhCCEeEEEECCCC---CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEc
Confidence 9999999999999999999999999875 245699999999999999999999999999999764
No 22
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=1e-87 Score=704.72 Aligned_cols=374 Identities=29% Similarity=0.539 Sum_probs=351.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++|..+.. .. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 86 a~~ev~~~~~~~~~~a~~~~~~~~~~~--~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 86 ARAEVTKSAALCDWYAEHGPAMLNPEP--TL--VENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCEE--CS--SGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhHHHhcCCcc--cC--CCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 457999999999999999998876542 11 13456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++.++++++ .++|+|+|++|+|+|+.+.+.+|++ ++|+|+||||+++|+.|++.++++++|++|||||
T Consensus 162 s~~tp~~~~~l~~~l----~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGG 237 (462)
T 3etf_A 162 APNVTGCAQMIARIL----AEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGG 237 (462)
T ss_dssp CTTCHHHHHHHHHHH----HHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCcHHHHHHHHHH----HHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCC
Confidence 999999998888775 4789999999999998888889987 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++++
T Consensus 238 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~ 317 (462)
T 3etf_A 238 SDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRD 317 (462)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHH
T ss_pred CCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++++++++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 318 ~v~~~i~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL 393 (462)
T 3etf_A 318 ELHQQVQASVAEGARLLLGGEKI----AGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGL 393 (462)
T ss_dssp HHHHHHHHHHHTTCEEEECCSBC----SSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCS
T ss_pred HHHHHHHHHHHCCCEEEeCCccc----CCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCc
Confidence 99999999999999999999742 34799999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|++||++||++||+.|+|+.++
T Consensus 394 ~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 394 SATIFTADDTLAAEMAARLECGGVFINGYSAS--DARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp CEEEECSCHHHHHHHHHHCCSSEEEESSCCCC--CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred eEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 99999999999999999999999999997543 456999999999999999999999999999998865
No 23
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=2.9e-88 Score=710.43 Aligned_cols=388 Identities=29% Similarity=0.437 Sum_probs=359.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
...|+..+++.++|++..+.++++++...... .....+..++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 84 ~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKp 161 (474)
T 4h7n_A 84 TVLEIDSFLASIDRWCGLAPELLQTSAKNTSI--PFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKP 161 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCEEEECSS--TTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhhhhcccccccCCCC--CCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecc
Confidence 34689999999999999999998766543322 2345577899999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHhccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 164 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~ 164 (456)
|+.+|+++..+++++ .++|+|+|++++++|+.+.+..|+.++|+|+||||+.+|+.|++.+++++||++|||||||
T Consensus 162 s~~tp~~~~~l~~~~----~~ag~p~gv~~~v~g~~~~~~~l~~~v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~ 237 (474)
T 4h7n_A 162 SEIAPRFVAPLLMAL----NTVPELRDVLIFVEGGGETGANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELGGKD 237 (474)
T ss_dssp CTTSCTTHHHHHHHH----TTCTTTTTTEEECCCCHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCE
T ss_pred cccCchHHHHHHhhh----hhhcccccceeeccccchhhhhhhhccceEEeccccchhhhhhhhhhcccccccccCCCcC
Confidence 999999998887765 4789999999999998899999988999999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHH
Q 012790 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 244 (456)
Q Consensus 165 p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v 244 (456)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++||++++.+++++
T Consensus 238 p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 317 (474)
T 4h7n_A 238 PAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGII 317 (474)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHH
T ss_pred ccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCcee
Q 012790 245 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 324 (456)
Q Consensus 245 ~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~ 324 (456)
.+++++++++|+++++||... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 318 ~~~i~~a~~~ga~v~~Gg~~~---~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a 394 (474)
T 4h7n_A 318 NDHILDAVEKGAVIHCGGKVE---ELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSA 394 (474)
T ss_dssp HHHHHHHHHTTCEEEECCCCE---EETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEE
T ss_pred HHHHHHHHhhCceeccCCccc---ccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeE
Confidence 999999999999999999742 12468999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeEEEEcccccccccCCCC
Q 012790 325 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDRWWPYIKTKIPK 403 (456)
Q Consensus 325 ~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~v~~~~~~~~~~~~~~~ 403 (456)
||||+|.++++++++++++|+|+||+...+...+.+||||+|.||+| +++|.+|+++|++.|+|+++.. ..+.
T Consensus 395 ~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~------~~~~ 468 (474)
T 4h7n_A 395 AVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTN------STSD 468 (474)
T ss_dssp EEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECS------SSCC
T ss_pred EEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCC------CCCC
Confidence 99999999999999999999999999877766677999999999998 8999999999999999998764 3455
Q ss_pred CCCC
Q 012790 404 PIQY 407 (456)
Q Consensus 404 ~~~~ 407 (456)
|+||
T Consensus 469 p~w~ 472 (474)
T 4h7n_A 469 PWWF 472 (474)
T ss_dssp TTSC
T ss_pred CCCc
Confidence 6676
No 24
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=6.6e-88 Score=708.57 Aligned_cols=374 Identities=30% Similarity=0.487 Sum_probs=349.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++++++|.++.. +.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 101 a~~ev~~~~~~l~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 177 (479)
T 2imp_A 101 AEVEVAFTADYIDYMAEWARRYEGEII-QSD--RPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKP 177 (479)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTCCCEEE-CCS--STTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCcc-ccC--CCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 457999999999999999988876532 221 12346789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++|++++||+++|||
T Consensus 178 s~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElG 253 (479)
T 2imp_A 178 SEFTPNNAIAFAKIVD----EIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELG 253 (479)
T ss_dssp CTTSCHHHHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECC
T ss_pred CccchHHHHHHHHHHH----HhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcC
Confidence 9999999999988865 6899999999999975 67899987 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCC-CCCccccccCHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA-GKYDMGALCLLEH 240 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~-~~~~~gpli~~~~ 240 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+ +++++||++++.+
T Consensus 254 Gk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~ 333 (479)
T 2imp_A 254 GKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAA 333 (479)
T ss_dssp CCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHH
T ss_pred CcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
+++++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 334 ~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~ 409 (479)
T 2imp_A 334 LERVEQKVARAVEEGARVAFGGKAV----EGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDY 409 (479)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCCC----CSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSE
T ss_pred HHHHHHHHHHHHHCCCEEEECCccc----CCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCC
Confidence 9999999999999999999999742 235899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
||++||||+|.++++++++++++|.|+||++..+ .+.+||||+|+||+|++||++||++||+.|+|+.+
T Consensus 410 gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 410 GLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp ESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCC--CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 9999999999999999999999999999997655 35699999999999999999999999999999764
No 25
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=2.7e-88 Score=713.27 Aligned_cols=372 Identities=27% Similarity=0.468 Sum_probs=347.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.++++... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 121 ~~ev~~~~~~l~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs 197 (498)
T 4f3x_A 121 NDELPAIIDCWRFFAGAVRNLHAP-AAGEY--LPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPS 197 (498)
T ss_dssp HTHHHHHHHHHHHHHHHTTCCEEE-CBEEE--ETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCc-cccCC--cccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECC
Confidence 569999999999999999886432 21111 124567899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
+.+|+++.++++++. ++ +|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++|++++||+++||||
T Consensus 198 ~~tp~t~~~l~~l~~----ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGG 272 (498)
T 4f3x_A 198 EQTPLTALKLARLIA----DI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGG 272 (498)
T ss_dssp TTCCHHHHHHHHHHH----TT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCC
T ss_pred cccHHHHHHHHHHHH----Hh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCC
Confidence 999999999998875 56 9999999999965 68999998 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++
T Consensus 273 k~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~ 352 (498)
T 4f3x_A 273 KAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRD 352 (498)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHH
T ss_pred CCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC-eEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 243 KLQNLVNDALDKGA-EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga-~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++.++|++++++|+ ++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 353 ~v~~~i~~a~~~Ga~~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~G 428 (498)
T 4f3x_A 353 RVASFVERAADQKHIEITTGGRTG----SDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYG 428 (498)
T ss_dssp HHHHHHHHHHHSTTCEEEECCSBC----CSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCC
T ss_pred HHHHHHHHHHHCCCCEEEECCccC----CCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCC
Confidence 99999999999999 999999742 3479999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
|++||||+|.++++++++++++|+|+||++..+. +.+||||+|+||+|+++|++||++||+.|+|+.+
T Consensus 429 L~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~--~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 429 LASSVWTKDISKAMRAASRLQYGCTWINTHFMLT--NEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp SEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC--TTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred ceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCC--CCCCcCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999986653 5699999999999999999999999999999764
No 26
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.8e-87 Score=710.08 Aligned_cols=378 Identities=27% Similarity=0.448 Sum_probs=348.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++|... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 121 a~~ev~~~~~~l~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 197 (515)
T 2d4e_A 121 VRAQVARAAENFAFYAEYAEHAMED-RTFPV--DRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKP 197 (515)
T ss_dssp HHHHHHHHHHHHHHHHTTGGGTTCE-EECCB--TTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc-ccccC--CCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecC
Confidence 3479999999999999999888643 22221 12345789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|+++|++++||+++|||
T Consensus 198 s~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELG 273 (515)
T 2d4e_A 198 AEWSPFTATKLAEILK----EADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELG 273 (515)
T ss_dssp CTTSCHHHHHHHHHHH----HTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECC
T ss_pred CCCcHHHHHHHHHHHH----HhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCC
Confidence 9999999999888865 7899999999999975 78899987 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||+++++|+
T Consensus 274 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 353 (515)
T 2d4e_A 274 GKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHL 353 (515)
T ss_dssp CCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHH
T ss_pred CcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCC----CCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhc
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHL----SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 317 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~----~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~ 317 (456)
++++++|++++++|+++++||..... +....|+|++|||+.+ +++|++++||+||||++|++|+|+||||+++|+
T Consensus 354 ~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~ 432 (515)
T 2d4e_A 354 QRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKAND 432 (515)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhc
Confidence 99999999999999999999974210 0002589999999999 999999999999999999999999999999999
Q ss_pred CCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 318 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 318 ~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|+||+|++||++||++||+.|+|+.+.
T Consensus 433 ~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~ 505 (515)
T 2d4e_A 433 TKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNV--RHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPL 505 (515)
T ss_dssp SSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCC--CCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence 999999999999999999999999999999999754 2456999999999999999999999999999998863
No 27
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=3.3e-87 Score=704.79 Aligned_cols=369 Identities=30% Similarity=0.505 Sum_probs=342.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEE-EecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE-FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
.|+..+++.++|+++.+++|..+.... .+...+++ ++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 123 ~ev~~~~~~~~~~a~~~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps 197 (497)
T 3i44_A 123 AQTATGSSHIRNFIKAYKEFSFQEALI-----EGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPS 197 (497)
T ss_dssp THHHHHHHHHHHHHHHHHHCCSEEESS-----TTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHhhccccccccc-----CCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECC
Confidence 699999999999999988876543221 12346788 999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|++.|++++||+++||||
T Consensus 198 ~~tp~t~~~l~~l~~----eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGG 273 (497)
T 3i44_A 198 EIAPLSAMLFAEILD----EAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGG 273 (497)
T ss_dssp TTSCHHHHHHHHHHH----HTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCC
T ss_pred cccHHHHHHHHHHHH----HhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCC
Confidence 999999998888764 7899999999999965 78999987 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++++++
T Consensus 274 k~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~ 352 (497)
T 3i44_A 274 KGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYD 352 (497)
T ss_dssp CCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHH
T ss_pred CCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHH
Confidence 99999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
+++++|++++++|+++++||..... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 353 ~v~~~i~~a~~~Ga~v~~gG~~~~~-~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL 431 (497)
T 3i44_A 353 KIQDLIQSGIDEGATLVTGGTGLPM-GMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGL 431 (497)
T ss_dssp HHHHHHHHHHHTTCEEEECCSSCCT-TCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCS
T ss_pred HHHHHHHHHHHCCCEEEECCCcCCC-cCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCc
Confidence 9999999999999999999942111 123699999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
++||||+|.++++++++++++|+|+||+. ...+.+||||+|+||+|+++|++||++||+.|+|+
T Consensus 432 ~a~v~t~d~~~a~~~a~~l~aG~V~iN~~---~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 432 TNYIQSQDRSKCRRIAAQVRSGMVEVNGH---ELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp EEEEECSCHHHHHHHHHHSCCSEEEETTC---CCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred EEEEECCCHHHHHHHHHhCCcCeEEECCC---CCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 99999999999999999999999999952 22456999999999999999999999999999985
No 28
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1.8e-87 Score=706.58 Aligned_cols=372 Identities=26% Similarity=0.476 Sum_probs=345.0
Q ss_pred hHH-HHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEe
Q 012790 5 SLG-EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83 (456)
Q Consensus 5 ~~~-Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 83 (456)
+.. |+..+++.++|+++.+++|.. +..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 117 a~~~Ev~~~~~~~~~~a~~~~~~~g-~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlK 193 (495)
T 1wnd_A 117 AFNDEIPAIVDVFRFFAGAARCLNG-LAAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLK 193 (495)
T ss_dssp HHHTHHHHHHHHHHHHHHHTTCCEE-ECBEEE--ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-ccccCC--CCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEee
Confidence 345 999999999999999988753 222211 1233568999999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccC
Q 012790 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 84 ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl 160 (456)
||+.+|+++.++++++. ++ +|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++|++++||+++||
T Consensus 194 ps~~tp~t~~~l~~l~~----ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lEL 268 (495)
T 1wnd_A 194 PSEITPLTALKLAELAK----DI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMEL 268 (495)
T ss_dssp CCTTCCHHHHHHHHHHT----TT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEEC
T ss_pred CCCCChHHHHHHHHHHH----Hh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCcccccc
Confidence 99999999999998876 46 9999999999954 78999998 79999999999999999999999999999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||++++++
T Consensus 269 GGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~ 348 (495)
T 1wnd_A 269 GGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAH 348 (495)
T ss_dssp CCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHH
T ss_pred CCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcC-CeEeecCC-CCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcC
Q 012790 241 SEKLQNLVNDALDKG-AEILARGS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS 318 (456)
Q Consensus 241 ~~~v~~~i~~a~~~G-a~v~~gG~-~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~ 318 (456)
+++++++|++++++| +++++||. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus 349 ~~rv~~~i~~a~~~G~a~~~~gG~~~~-----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 423 (495)
T 1wnd_A 349 LERVGKAVEEAKATGHIKVITGGEKRK-----GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDS 423 (495)
T ss_dssp HHHHHHHHHHHHHTSSCEEEECCSBCS-----SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHhCCCeEEEECCcccC-----CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcC
Confidence 999999999999999 99999996 31 258999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 319 RYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 319 ~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
+|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+|+++|++||++||+.|+|+.+
T Consensus 424 ~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 424 QYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFML--VSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp SCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCC--CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 999999999999999999999999999999987542 35699999999999999999999999999999763
No 29
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=3.9e-87 Score=703.09 Aligned_cols=374 Identities=29% Similarity=0.526 Sum_probs=346.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++..+.+.... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 104 a~~ev~~~~~~~~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 180 (481)
T 3jz4_A 104 AKGEISYAASFIEWFAEEGKRIYGD-TIPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKP 180 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCCEE-EECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc-ccccc--CCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 4569999999999999887764322 11211 12456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|++.++++++|+++|||
T Consensus 181 s~~tp~~~~~l~~l~~----~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElG 256 (481)
T 3jz4_A 181 ASQTPFSALALAELAI----RAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELG 256 (481)
T ss_dssp CTTSCHHHHHHHHHHH----HHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECC
T ss_pred CCCCcHHHHHHHHHHH----HhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecC
Confidence 9999999998888764 6899999999999964 78899997 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++++++
T Consensus 257 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~ 336 (481)
T 3jz4_A 257 GNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAV 336 (481)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHH
T ss_pred CCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 337 ~~v~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~g 412 (481)
T 3jz4_A 337 AKVEEHIADALEKGARVVCGGKAH----ERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFG 412 (481)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSBC----TTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHHCCCEEEeCCccc----CCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCC
Confidence 999999999999999999999742 3458999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
|++||||+|.++++++++++++|.|+||++... .+.+||||+|+||+|++||++||++||+.|+|+..
T Consensus 413 L~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 413 LAAYFYARDLSRVFRVGEALEYGIVGINTGIIS--NEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp SEEEEECCBHHHHHHHHHHCCCSEEEESCSCCC--CSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred ceEEEECCCHHHHHHHHHhCCeeeEEECCCCCC--CCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 999999999999999999999999999997543 35699999999999999999999999999999763
No 30
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.9e-87 Score=707.65 Aligned_cols=373 Identities=26% Similarity=0.419 Sum_probs=345.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccc--cccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEE
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI--HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 82 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vvl 82 (456)
+..|+..+++.++|+++++++|.. +..+...... ....+++++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 112 a~~Ev~~~~~~l~~~a~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 190 (501)
T 1uxt_A 112 AVGEVKAAVDRLRLAELDLKKIGG-DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVV 190 (501)
T ss_dssp HHHHHHHHHHHHHTGGGGGGGTCC-EEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-ccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 347999999999999999988743 3222211011 2256899999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccC
Q 012790 83 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 83 Kps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl 160 (456)
|||+.+|+++.++++++. ++|+|+|++|+|+|+++.+++|++ ++|+|+||||+++|+.|+++|+ +||+++||
T Consensus 191 Kps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa--l~~v~lEL 264 (501)
T 1uxt_A 191 KPSISDPLPAAMAVKALL----DAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMEL 264 (501)
T ss_dssp ECCTTSCHHHHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEEC
T ss_pred eCCCCchHHHHHHHHHHH----HhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC--CCeEEEEc
Confidence 999999999999988865 689999999999997777899987 8999999999999999999988 99999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||++++++
T Consensus 265 GGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~ 344 (501)
T 1uxt_A 265 GGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSA 344 (501)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHH
T ss_pred CCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCC-ccccceeeecCC---CCCccchhccccCceeEeeeCCHHHHHHHHh
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVD-QYFPPTVIVNVN---HTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 316 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g-~~~~Ptvl~~v~---~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n 316 (456)
+++++++|++++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|+|+||||+++|
T Consensus 345 ~~rv~~~i~~a~~~Ga~~~~gG~~-------~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN 417 (501)
T 1uxt_A 345 VDEMMAAIEDAVEKGGRVLAGGRR-------LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELAN 417 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCB-------CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEeCCcc-------CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHh
Confidence 999999999999999999999972 57 999999999999 9999999999999999999999999999999
Q ss_pred cCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 317 DSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 317 ~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
+++|||++||||+|.++++++++++++|+|+||+++ +...+.+||||+|+||+|++||++||++||+.|+|+.+.
T Consensus 418 ~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 492 (501)
T 1uxt_A 418 GRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY 492 (501)
T ss_dssp TSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCC-CCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEEC
T ss_pred cCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEec
Confidence 999999999999999999999999999999999874 233467999999999999999999999999999998864
No 31
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=4.8e-87 Score=706.08 Aligned_cols=374 Identities=29% Similarity=0.427 Sum_probs=331.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++... ..+.. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 107 a~~Ev~~~~~~~~~~a~~~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 183 (508)
T 3r64_A 107 ANLEITLAGNITKESASFPGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKP 183 (508)
T ss_dssp HHHHHHHHHHHHHHHTTSTTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEEC
Confidence 456999999999999998876433 22211 012356789999999999999999999999999999999999999999
Q ss_pred CCCChhHH-HHHHHHHHHHHHHcCCCCCcEEEEeCC-hHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhc--cCCcccc
Q 012790 85 SENASWSG-CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASK--TLTPVTL 158 (456)
Q Consensus 85 s~~~p~~~-~~l~~l~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~--~~~pv~l 158 (456)
|+.+|+++ .++++++ .++|+|+|++|+|+|+ .+.+++|++ ++|+|+||||+++|+.|+++|++ ++||+++
T Consensus 184 s~~tp~t~~~~l~~ll----~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~l 259 (508)
T 3r64_A 184 ASDTPVTGGVIPARIF----EEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVAL 259 (508)
T ss_dssp CTTCHHHHTHHHHHHH----HTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEE
T ss_pred CCCChHHHHHHHHHHH----HHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEe
Confidence 99999999 8887775 5799999999999997 478999998 89999999999999999999998 9999999
Q ss_pred cCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCH
Q 012790 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 238 (456)
Q Consensus 159 ElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~ 238 (456)
|||||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||++++
T Consensus 260 ElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~ 339 (508)
T 3r64_A 260 ELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVIND 339 (508)
T ss_dssp ECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCH
T ss_pred ecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcC
Q 012790 239 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS 318 (456)
Q Consensus 239 ~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~ 318 (456)
++++++++++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus 340 ~~~~~v~~~i~~a~~~Ga~v~~gG~~-------~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 412 (508)
T 3r64_A 340 SQLSGLKEKIELAKKEGATVQVEGPI-------EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANAS 412 (508)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEECCCE-------ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHcCCEEEecCCC-------CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCC
Confidence 99999999999999999999999972 68999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEccc
Q 012790 319 RYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 393 (456)
Q Consensus 319 ~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~ 393 (456)
+|||++||||+|.++++++++++++|+|+||++..+ ..+.+||||+|+||+|++||++||++||+.|+|+.+..
T Consensus 413 ~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~ 486 (508)
T 3r64_A 413 DFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRS 486 (508)
T ss_dssp SCCSCEEEECSCHHHHHHHHTTSCSSEEEECC---------------------CCCHHHHHHHTEEEEEEEEECC
T ss_pred CCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecc
Confidence 999999999999999999999999999999998655 34679999999999999999999999999999988764
No 32
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=3e-87 Score=704.29 Aligned_cols=373 Identities=30% Similarity=0.516 Sum_probs=346.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++++. .+..+.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 105 a~~ev~~~~~~~~~~a~~~~~~~-g~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 181 (487)
T 2w8n_A 105 AHGEILYSAFFLEWFSEEARRVY-GDIIHTP--AKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKP 181 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCC-CEEECCS--CTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CcccccC--CCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 45699999999999999988743 3332221 12346789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEe---CCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVIT---GFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 158 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~---g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~l 158 (456)
|+.+|+++.++++++. ++|+|+|++|+|+ |++ +.+++|++ ++|+|+||||+++|+.|+++|++++||+++
T Consensus 182 s~~tp~t~~~l~~l~~----~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~l 257 (487)
T 2w8n_A 182 AEDTPFSALALAELAS----QAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSM 257 (487)
T ss_dssp CTTCCHHHHHHHHHHH----HHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEE
T ss_pred CCcchHHHHHHHHHHH----HhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEE
Confidence 9999999999888764 6899999999999 854 67899997 799999999999999999999999999999
Q ss_pred cCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhc-cccCCCCCCCCccccccC
Q 012790 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSAGPPLAGKYDMGALCL 237 (456)
Q Consensus 159 ElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~g~~~~~~~~~gpli~ 237 (456)
|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.++++++||+++
T Consensus 258 ElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~ 337 (487)
T 2w8n_A 258 ELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLIN 337 (487)
T ss_dssp EECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSS
T ss_pred ecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCc-cccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHh
Q 012790 238 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ-YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 316 (456)
Q Consensus 238 ~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~-~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n 316 (456)
++++++++++|++++++|+++++||.. ...|+ |++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 338 ~~~~~rv~~~i~~a~~~Ga~~~~gg~~-----~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN 412 (487)
T 2w8n_A 338 EKAVEKVEKQVNDAVSKGATVVTGGKR-----HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIAN 412 (487)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEECCSB-----CTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCEEEeCCcc-----CCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHh
Confidence 999999999999999999999999973 23588 999999999999999999999999999999999999999999
Q ss_pred cCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 317 DSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 317 ~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
+++|||++||||+|.+.++++++++++|+|+||++..+. +.+||||+|.||+|+++|++||++||+.|+|+.+
T Consensus 413 ~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~--~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 413 AADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISS--VECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp CTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCC--TTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred CCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCC--CCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 999999999999999999999999999999999976543 4599999999999999999999999999999875
No 33
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=1.7e-86 Score=703.19 Aligned_cols=375 Identities=25% Similarity=0.403 Sum_probs=346.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++++++|.++...... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 131 a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 208 (516)
T 1uzb_A 131 ASADVAEAIDFIEYYARAALRYRYPAVEVVP--YPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKP 208 (516)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCSSCCCCCC--CTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccccC--CCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeC
Confidence 4579999999999999999998865421111 12346689999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhh------ccCCc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS------KTLTP 155 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa------~~~~p 155 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++|+ +++||
T Consensus 209 s~~tp~ta~~l~~l~~----eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~ 284 (516)
T 1uzb_A 209 AEDAVVVGAKVFEIFH----EAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKR 284 (516)
T ss_dssp CGGGHHHHHHHHHHHH----HHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCE
T ss_pred CCCCHHHHHHHHHHHH----HhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccce
Confidence 9999999999888765 6899999999999954 78999998 7999999999999999999998 88999
Q ss_pred ccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccc
Q 012790 156 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 235 (456)
Q Consensus 156 v~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl 235 (456)
+++|||||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+| ++++++||+
T Consensus 285 v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpl 363 (516)
T 1uzb_A 285 AYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPV 363 (516)
T ss_dssp EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCC
T ss_pred eEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC-ccccccCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred cCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHH
Q 012790 236 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLA 315 (456)
Q Consensus 236 i~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~ 315 (456)
++++++++++++|++++++| ++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 364 i~~~~~~~v~~~i~~a~~~G-~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~a 438 (516)
T 1uzb_A 364 VSAEQERKVLSYIEIGKNEG-QLVLGGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVA 438 (516)
T ss_dssp SCHHHHHHHHHHHHHHTTTS-EEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCC-CEEECCccC----CCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHH
Confidence 99999999999999999888 899999731 2368999999999999999999999999999999999999999999
Q ss_pred hcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCC-cchHHHHhccceeeEEEEc
Q 012790 316 NDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 316 n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~-~~g~~gl~~ft~~k~v~~~ 391 (456)
|+++|||++||||+|.++++++++++++|.|+||+...+...+.+||||+|.||+|+ .+|.+++++||+.|+|+.+
T Consensus 439 N~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 439 NDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp HCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred hcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 999999999999999999999999999999999997655555679999999999995 6889999999999999763
No 34
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=7.6e-87 Score=696.70 Aligned_cols=367 Identities=29% Similarity=0.447 Sum_probs=341.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 86 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 86 (456)
.|+..+++.++|+++++++|.+++..+.+....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus 88 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~ 167 (457)
T 3lns_A 88 AEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSE 167 (457)
T ss_dssp HTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCC
Confidence 69999999999999999999887654443322346789999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcce
Q 012790 87 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165 (456)
Q Consensus 87 ~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~p 165 (456)
.+|+++.++++++.+ + +|+|++|+|+|+.+.+++|++ ++|+|+||||+++|+.|+++|++++||+++|||||||
T Consensus 168 ~tp~t~~~l~~l~~~----a-lP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p 242 (457)
T 3lns_A 168 TTPETSAVIEKIIAE----A-FAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCP 242 (457)
T ss_dssp TCHHHHHHHHHHHHH----H-CCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEE
T ss_pred CChHHHHHHHHHHHH----h-CCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCC
Confidence 999999999998875 3 999999999997788999999 9999999999999999999999999999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHH
Q 012790 166 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 245 (456)
Q Consensus 166 ~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~ 245 (456)
+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++ |.++ ++||+++++++++++
T Consensus 243 ~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~ 317 (457)
T 3lns_A 243 LIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLV 317 (457)
T ss_dssp EEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHH
T ss_pred CeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987 5555 999999999999999
Q ss_pred HHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhc-CCCCcee
Q 012790 246 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND-SRYGLGC 324 (456)
Q Consensus 246 ~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~-~~~gL~~ 324 (456)
++|+++ ++++++||.. +..|+|++|||+++++++|++++||+||||++|++|+|+||||+++|+ ++|||++
T Consensus 318 ~~i~~a---~~~~~~gg~~-----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a 389 (457)
T 3lns_A 318 SLLEAT---QGQVLVGSQA-----DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAV 389 (457)
T ss_dssp HHHHHC---CSEEEECCCE-----EGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEE
T ss_pred HHHHhc---CCeEEeCCcc-----CCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEE
Confidence 999985 3699999973 246899999999999999999999999999999999999999999999 9999999
Q ss_pred EEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 325 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 325 ~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
||||+|.++++++++++++|+|+||++..+...+.+||||+|+||+|+++|++||++||+.|+|++.
T Consensus 390 ~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 390 YVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp EEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred EEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 9999999999999999999999999986555566799999999999999999999999999999764
No 35
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=9.2e-87 Score=701.99 Aligned_cols=376 Identities=30% Similarity=0.478 Sum_probs=347.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 86 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 86 (456)
.|+..+++.++|+++.++++. .+..+. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 104 ~ev~~~~~~~~~~a~~~~~~~-~~~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~vVlKps~ 179 (490)
T 2ve5_A 104 VDIVTGADVLEYYAGLVPAIE-GEQIPL---RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 179 (490)
T ss_dssp THHHHHHHHHHHHHHHGGGCC-EEEEEE---ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CccccC---CCCceeeEeeccccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCC
Confidence 399999999999999988753 222221 1245678999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-hHhHHHHHh--ccCEEEecCCHHHHHHHHHHh-hccCCcccccCCC
Q 012790 87 NASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGG 162 (456)
Q Consensus 87 ~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~a-a~~~~pv~lElgG 162 (456)
.+|+++.++++++. ++|+|+|++|+|+|+ .+.++.|++ ++|+|+||||+++|+.|++++ ++++||+++||||
T Consensus 180 ~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a~~l~~v~lElGG 255 (490)
T 2ve5_A 180 VTPLTALKLAEIYT----EAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGG 255 (490)
T ss_dssp TSCHHHHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCC
T ss_pred cchHHHHHHHHHHH----HhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhchhccccceEEEcCC
Confidence 99999999988865 689999999999995 478999988 799999999999999999999 9999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||++++++++
T Consensus 256 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~~~ 335 (490)
T 2ve5_A 256 KSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHME 335 (490)
T ss_dssp CCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHH
T ss_pred CceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++.++|++++++|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 336 ~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~gL 415 (490)
T 2ve5_A 336 SVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGL 415 (490)
T ss_dssp HHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCS
T ss_pred HHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHHHHHHHHhCCCCCc
Confidence 99999999999999999999753211124689999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
++||||+|.++++++++++++|.|+||++... .+.+||||+|+||+|++||.+||++||+.|+|+.+.
T Consensus 416 ~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~v~~~~ 483 (490)
T 2ve5_A 416 AAGVVTQDLARAHRAIHRLEAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp EEEEECSBHHHHHHHHHHSCCSEEEESCCSCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred eEEEEcCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCCCCCCCCCcchHHHHHHhheeEEEEEcc
Confidence 99999999999999999999999999997543 356999999999999999999999999999998754
No 36
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=3.2e-86 Score=695.06 Aligned_cols=368 Identities=32% Similarity=0.488 Sum_probs=342.8
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCccccc----ccc-eEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCe
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIH----KKA-KVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNG 79 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~ 79 (456)
+..|+..+++.++|+++++++|.... .+.+ ..+ ... +++++|+|||++|+|||||+.+.++++++||++||+
T Consensus 97 a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~ 173 (475)
T 1euh_A 97 AVSEVVRTAEIINYAAEEGLRMEGEV-LEGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNV 173 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEE-EEGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCc-ccCC--CCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCE
Confidence 45799999999999999998886542 1211 112 345 899999999999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcc
Q 012790 80 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV 156 (456)
Q Consensus 80 VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv 156 (456)
||+|||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++++ +||+
T Consensus 174 vVlKps~~tp~t~~~l~~ll~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa--~~~v 247 (475)
T 1euh_A 174 IAFKPPTQGSISGLLLAEAFA----EAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPI 247 (475)
T ss_dssp EEEECCSTTHHHHHHHHHHHH----HHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCE
T ss_pred EEEeCCCcChHHHHHHHHHHH----HhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC--CCcE
Confidence 999999999999999988865 6899999999999975 67899987 7999999999999999999988 9999
Q ss_pred cccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCcccccc
Q 012790 157 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 236 (456)
Q Consensus 157 ~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli 236 (456)
++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++
T Consensus 248 ~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpli 326 (475)
T 1euh_A 248 MLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED-DADITPLI 326 (475)
T ss_dssp EEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-TCSBCCCS
T ss_pred EEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc-cCccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHh
Q 012790 237 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 316 (456)
Q Consensus 237 ~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n 316 (456)
++++++++++++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 327 ~~~~~~~v~~~i~~a~~~Ga~~~~gG~~-------~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an 399 (475)
T 1euh_A 327 DTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISN 399 (475)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEECSCCCE-------ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHh
Confidence 9999999999999999999999999972 589999999999999999999999999999999999999999999
Q ss_pred cCCCCceeEEecCCHHHHHHHHHhcccCCeeecC-CcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 317 DSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 317 ~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~-~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
+++|||++||||+|.++++++++++++|.|+||+ +..+ .+.+||||+|+||+|+++|++||++||+.|+|+.+
T Consensus 400 ~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 400 KSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG--TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp HSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC--STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred CCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCC--CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 9999999999999999999999999999999999 5443 35699999999999999999999999999999764
No 37
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=3.5e-86 Score=696.76 Aligned_cols=374 Identities=29% Similarity=0.439 Sum_probs=324.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++ +.++..+.. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 101 a~~ev~~~~~~~~~~a~~~~~-~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 178 (485)
T 4dng_A 101 STIELEQTIAILDEAMTYTGE-LGGVKEVPS-DIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKP 178 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHGGG-CSCEECCCC-SSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCeecccc-CCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEC
Confidence 346999999999999999875 333332211 112356789999999999999999999999999999999999999999
Q ss_pred CCCChhHH-HHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccC
Q 012790 85 SENASWSG-CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 85 s~~~p~~~-~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl 160 (456)
|+.+|+++ .++.+++ .++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|++.++++++|+++||
T Consensus 179 s~~tp~~~~~~l~~~l----~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lEl 254 (485)
T 4dng_A 179 DIQTAISGGTIIAKAF----EHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALEL 254 (485)
T ss_dssp CGGGHHHHTHHHHHHH----HHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCcChHHHHHHHHHHH----HHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhc
Confidence 99999999 8877765 57999999999999987 58899998 89999999999999999999999999999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||++++.+
T Consensus 255 GGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 334 (485)
T 4dng_A 255 GGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQ 334 (485)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHH
T ss_pred CCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 335 ~~~v~~~i~~a~~~Ga~v~~gg~~-------~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~ 407 (485)
T 4dng_A 335 IEKALEIIEQAKTDGIELAVEGKR-------VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEY 407 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCCC-------CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCC
Confidence 999999999999999999999972 6899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
||++||||+|.++++++++++++|.|+||++..+ ..+.+||||+|.||+|++||++||++||+.|+|+.+.
T Consensus 408 gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 408 GLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp CSEEEEECSCHHHHHHHHTTSCSSEEEESCC-----------------------CHHHHHHHEEEEEEEEEC
T ss_pred CceEEEECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 9999999999999999999999999999998655 3456999999999999999999999999999998754
No 38
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=5.9e-86 Score=694.64 Aligned_cols=375 Identities=22% Similarity=0.349 Sum_probs=344.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++... +|+..+..+.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 100 a~~ev~~~~~~~~~~a~~~-~~~~g~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 176 (486)
T 1t90_A 100 ALGEVGRGIENVEFAAGAP-SLMMGDSLASI--ATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKP 176 (486)
T ss_dssp HHHHHHHHHHHHHHHTTHH-HHHCEEEEEEE--ETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHH-HHhcCcccccC--CCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEEC
Confidence 4579999999999988544 45544432211 12345689999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|+.+.+++|++ ++|+|+||||+++|+.|+++|++++||+++||||
T Consensus 177 s~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGG 252 (486)
T 1t90_A 177 SERTPLLTEKLVELFE----KAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGA 252 (486)
T ss_dssp CSSSCHHHHHHHHHHH----HTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCCChHHHHHHHHHHH----HhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCC
Confidence 9999999999888865 689999999999997788999998 7999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCe-EEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER-FYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~-v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
|||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|+++++++++|+|.++++++||+++++++
T Consensus 253 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~ 331 (486)
T 1t90_A 253 KNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNK 331 (486)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHH
T ss_pred CCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHH
Confidence 999999999999999999999999999999999999 999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.+++++++++|+++++||... .+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 332 ~~v~~~i~~a~~~Ga~~~~gg~~~---~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~g 408 (486)
T 1t90_A 332 KRTLSYIEKGLEEGARLVCDGREN---VSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFA 408 (486)
T ss_dssp HHHHHHHHHHHHHTCEEEECSSSS---CCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCccC---CCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCC
Confidence 999999999999999999999742 12368999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC--CcchHHHHhccceeeEEEEc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G--~~~g~~gl~~ft~~k~v~~~ 391 (456)
|++||||+|.++++++++++++|.|+||+.. +...+.+||||+|+||+| ++||++|+++||+.|+|+.+
T Consensus 409 L~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~-~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~ 479 (486)
T 1t90_A 409 NGACLFTSNSNAIRYFRENIDAGMLGINLGV-PAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479 (486)
T ss_dssp SEEEEECCBHHHHHHHHHHCCCSEEEESCSC-CCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEE
T ss_pred eEEEEEcCCHHHHHHHHHhCCcCeEEECCCC-CCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999853 333356999999999999 89999999999999999875
No 39
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=4.3e-86 Score=694.93 Aligned_cols=368 Identities=29% Similarity=0.488 Sum_probs=322.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.+++|..... ....+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 104 ~~ev~~~~~~~~~~a~~~~~~~~~~~--------~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps 175 (478)
T 3ty7_A 104 RVHYQMGLNHFVAARDALDNYEFEER--------RGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPS 175 (478)
T ss_dssp HTHHHHHHHHHHHHHHHHHHCCSEEE--------ETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccC--------CccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECC
Confidence 56999999999999999988765321 2457899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
+.+|+++.++++++. ++|+|+|++|+|+|++ +.++.|+. ++|+|+||||+++|+.|+++++++++|+++||||
T Consensus 176 ~~tp~t~~~l~~~~~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGG 251 (478)
T 3ty7_A 176 EETPFAAVILAEIFD----KVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGG 251 (478)
T ss_dssp TTSCHHHHHHHHHHH----HHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCC
T ss_pred CcchHHHHHHHHHHH----HhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCC
Confidence 999999999888865 6899999999999965 78999987 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++++
T Consensus 252 k~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~ 331 (478)
T 3ty7_A 252 KSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFD 331 (478)
T ss_dssp CCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHH
T ss_pred CCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++++++++++++|+++++||.... .....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 332 ~v~~~i~~a~~~Ga~~~~gg~~~~-~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL 410 (478)
T 3ty7_A 332 QVQNYINKGIEEGAELFYGGPGKP-EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGL 410 (478)
T ss_dssp HHHHHHHHHHHHTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCS
T ss_pred HHHHHHHHHHHCCCEEEecCccCc-cccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCc
Confidence 999999999999999999995221 1124689999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
++||||+|.+.++++++++++|+|+||+ .. ..+.+||||+|+||+|+++|++||++||+.|+|+
T Consensus 411 ~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 474 (478)
T 3ty7_A 411 AGYVIGKDKETLHKVARSIEAGTVEINE-AG--RKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474 (478)
T ss_dssp EEEEECSCHHHHHHHHHHSCSSEEEETT-CC------------------------CCGGGEEEEEEE
T ss_pred eEEEECCCHHHHHHHHHhCCcCeEEECC-CC--CCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence 9999999999999999999999999999 22 2356899999999999999999999999999987
No 40
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=1.2e-84 Score=692.88 Aligned_cols=386 Identities=22% Similarity=0.297 Sum_probs=350.4
Q ss_pred HHH-HHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 6 LGE-IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 6 ~~E-i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
..| +..+++.++|+++.++++..++....+ .....++++.|+|||++|+|||||+.+..+++++|| +||+||+||
T Consensus 159 ~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKP 234 (563)
T 4e3x_A 159 EIDAAAELIDFFRFNAKFAVELEGEQPISVP---PSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKP 234 (563)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHTTCCCCCCT---TEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEEC
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCccCCC---CCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEEC
Confidence 345 889999999999999998765432221 123345667778999999999999999999999999 599999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCc------
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP------ 155 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~p------ 155 (456)
|+.+|+++.++++++. +||+|+|++|+|+|++ +.++.|++ ++|+|+||||+++|+.|+++++++++|
T Consensus 235 s~~tp~sa~~l~~ll~----eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~pr 310 (563)
T 4e3x_A 235 SDTAMLASYAVYRILR----EAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPR 310 (563)
T ss_dssp CGGGHHHHHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCE
T ss_pred CCCChHHHHHHHHHHH----HhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCc
Confidence 9999999998888764 7899999999999986 67899987 999999999999999999999999985
Q ss_pred ccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCC-CCCCCcccc
Q 012790 156 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP-LAGKYDMGA 234 (456)
Q Consensus 156 v~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~~gp 234 (456)
+++|||||||+||++|||++.|++.+++++|.|+||.|+|++|||||+++||+|+++|+++++++++|+| .++++++||
T Consensus 311 v~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gp 390 (563)
T 4e3x_A 311 LAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSA 390 (563)
T ss_dssp EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCC
T ss_pred eeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred ccCHHHHHHHHHHHHHHHh-cCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCC--HHHH
Q 012790 235 LCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEV 311 (456)
Q Consensus 235 li~~~~~~~v~~~i~~a~~-~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~--~~ea 311 (456)
++++++++++.++|+++++ +|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+| +|||
T Consensus 391 li~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deA 466 (563)
T 4e3x_A 391 VIDAKAFARIKKWLEHARSSPSLSILAGGQCN----ESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRET 466 (563)
T ss_dssp CSCHHHHHHHHHHHHHHHHCTTEEEEECCCEE----CSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHH
T ss_pred CcCHHHHHHHHHHHHHHhhcCCCEEEeCCccC----CCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHH
Confidence 9999999999999999996 899999999742 34699999999999999999999999999999999996 7999
Q ss_pred HHHH-hcCCCCceeEEecCCHHHHHHHHHhcc--cCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeE
Q 012790 312 VKLA-NDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKS 387 (456)
Q Consensus 312 i~~~-n~~~~gL~~~vft~d~~~~~~~~~~l~--~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~ 387 (456)
|+++ |+++|||++||||+|.+.+++++++++ +|+|+||+..+....+.+||||+|.||+| +.+|+++|++|++.|+
T Consensus 467 i~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~ 546 (563)
T 4e3x_A 467 LKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQV 546 (563)
T ss_dssp HHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEE
T ss_pred HHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEE
Confidence 9999 799999999999999999999999976 99999999866555567999999999998 8999999999999999
Q ss_pred EEEcccccccccCCCCCCCCCCC
Q 012790 388 VVEDRWWPYIKTKIPKPIQYPVA 410 (456)
Q Consensus 388 v~~~~~~~~~~~~~~~~~~~p~~ 410 (456)
|.+. | ..+.++|||+.
T Consensus 547 v~~~-~------~~~~~~~yp~~ 562 (563)
T 4e3x_A 547 IKET-H------KPLGDWRYSYM 562 (563)
T ss_dssp EEEE-C------SCCCCSSCTTC
T ss_pred EEEe-C------cCCCcccCCCC
Confidence 9876 3 23567899974
No 41
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.8e-82 Score=668.74 Aligned_cols=368 Identities=22% Similarity=0.344 Sum_probs=339.8
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++++.+..... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 99 a~~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 174 (490)
T 3ju8_A 99 SATEVTSMVNKVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKP 174 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEEC
Confidence 45799999999999999988876543211 12345678899999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcc-cccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV-TLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv-~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|+.+.+++|++ ++|+|+||||+++|+.|+++|+++++|+ +||||
T Consensus 175 s~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElG 250 (490)
T 3ju8_A 175 SELTPKVAELTLKAWI----QAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMG 250 (490)
T ss_dssp CTTCHHHHHHHHHHHH----HTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECC
T ss_pred CCCCcHHHHHHHHHHH----HhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecC
Confidence 9999999998888764 689999999999998788999998 7999999999999999999999999998 89999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhh-HHHHHHHHHHHHhccccCC-CCCCCCccccccCHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVKSVSAGP-PLAGKYDMGALCLLE 239 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~g~-~~~~~~~~gpli~~~ 239 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|+++++++++|+ |.++++++||+++++
T Consensus 251 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~ 330 (490)
T 3ju8_A 251 GNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLS 330 (490)
T ss_dssp CCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHH
T ss_pred CCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHH
Confidence 99999999999999999999999999999999999999999996 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
+++++.+++++++++|+++++||... +..|+|++|||+. ++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 331 ~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~ 405 (490)
T 3ju8_A 331 AAEHLLKAQEHLIGKGAQPLLAMTQP----IDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQ 405 (490)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCCCC----STTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEECCCcc----CCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCC
Confidence 99999999999999999999999742 3578999999999 999999999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|||++||||+|.++++++++++++|+|+||++.... .+.+||||+|.||++ ++++|++.|+|+...
T Consensus 406 ~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~-~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 406 YGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGA-ASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp CCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCC-CTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred CCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCC-CCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 999999999999999999999999999999976533 356999999999975 589999999987653
No 42
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=1.3e-81 Score=704.15 Aligned_cols=377 Identities=23% Similarity=0.399 Sum_probs=349.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEe
Q 012790 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83 (456)
Q Consensus 4 ~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 83 (456)
.+..|+..+++.++|+++.++++.+++.... ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 624 ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~---~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlK 700 (1026)
T 4f9i_A 624 QAYADVTEAIDFLEYYAREMIRLGQPQRVGH---APGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFK 700 (1026)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCEEECC---CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEE
Confidence 3457999999999999999999876544321 1245678999999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhh------ccCC
Q 012790 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS------KTLT 154 (456)
Q Consensus 84 ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa------~~~~ 154 (456)
||+.+|+++.++++++. +||+|+|++|+|+|++ +.+++|++ +||+|+||||+++|+.|++.++ ++++
T Consensus 701 Pse~tplsa~~l~ell~----eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lk 776 (1026)
T 4f9i_A 701 PSGITSIIGWHLVELFR----EAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVK 776 (1026)
T ss_dssp CCGGGHHHHHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCC
T ss_pred cCccchHHHHHHHHHHH----HhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCcc
Confidence 99999999998888764 7899999999999976 68999998 8999999999999999999998 5789
Q ss_pred cccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCcccc
Q 012790 155 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 234 (456)
Q Consensus 155 pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gp 234 (456)
|+++|||||||+||++|||++.|++.+++|+|.|+||.|+|++|+|||++++|+|+++|+++++++++|+|.++++++||
T Consensus 777 pv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gp 856 (1026)
T 4f9i_A 777 KIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGA 856 (1026)
T ss_dssp EEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCC
T ss_pred ceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHH
Q 012790 235 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKL 314 (456)
Q Consensus 235 li~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~ 314 (456)
+|++.+++++.++|++++++| ++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 857 vi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~ 931 (1026)
T 4f9i_A 857 VADDKAMKSIKEYAEIGKREG-HVLYESPVP----AGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEW 931 (1026)
T ss_dssp CSSHHHHHHHHHHHHHHHHHS-EEEEECCCC----SSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHhCC-eEEecCCcC----CCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHH
Confidence 999999999999999999998 999999731 234999999999999999999999999999999999999999999
Q ss_pred HhcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCC-cchHHHHhccceeeEEEEcc
Q 012790 315 ANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 315 ~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~-~~g~~gl~~ft~~k~v~~~~ 392 (456)
+|+++|||++||||+|.+.++++++++++|+|+||+.+++...+.+||||+|.||+|+ .+|+++|++|++.|+|..+.
T Consensus 932 aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 932 ANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp HTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred HHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence 9999999999999999999999999999999999998766555679999999999995 68899999999999998865
No 43
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1.6e-81 Score=667.94 Aligned_cols=382 Identities=17% Similarity=0.246 Sum_probs=333.9
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhC------CcccCCCcccccccceEEEecc-eEEEEEcCCccchHhhHHHHHHHHhcC
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLK------PEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIFNPMLAAVFSG 77 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~P~-GVv~vi~p~N~P~~~~~~~~~~ALaaG 77 (456)
+..|+..+++.++|++..+++... ++..+... ......++.++|+ |||++|+|||||+.++++++++||++|
T Consensus 101 a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaG 179 (534)
T 2y53_A 101 SAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSK-DRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSG 179 (534)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECST-TSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCC-CCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcC
Confidence 346999999999999988765421 11111110 0011357889997 999999999999999999999999999
Q ss_pred CeEEEecCCCChhHHHHHHHHHHHHHHHcC-CCCCcEEEEeCChH-hHHHHHhccCEEEecCCHHHHHHHHHHhh--ccC
Q 012790 78 NGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFAE-TGEALVSSVDKIIFVGSPGVGRMIMRNAS--KTL 153 (456)
Q Consensus 78 N~VvlKps~~~p~~~~~l~~l~~~~l~~aG-lp~g~v~vv~g~~~-~~~~L~~~vd~i~fTGS~~~g~~v~~~aa--~~~ 153 (456)
|+||+|||+.+|+++..+++++. ++| +|+|++|+|+|+++ .++.| .++|+|+||||+++|+.|++.++ +++
T Consensus 180 N~VVlKPs~~tp~~~~~l~~l~~----~aG~lP~gvv~vv~g~~~~l~~~l-~~vd~V~FTGS~~~G~~i~~~aa~a~~~ 254 (534)
T 2y53_A 180 VPVIVKPATATAWLTQRMVADVV----DAGILPPGALSIICGSSAGLLDQI-RSFDVVSFTGSADTAATLRAHPAFVQRG 254 (534)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHH----HHTCSCTTSEEECCSCCTTSGGGC-CTTCEEEEESCHHHHHHHHTSHHHHTTC
T ss_pred CEEEEECCCcchHHHHHHHHHHH----HhCCCCCCeEEEEeCChHHHHhcc-cccCEEEEECCHHHHHHHHHhhhhhcCC
Confidence 99999999999999999888864 689 79999999999653 22222 17999999999999999998875 899
Q ss_pred CcccccCCCcceEEEcCCC-----CHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCC
Q 012790 154 TPVTLELGGKDAFIVCDDV-----DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 228 (456)
Q Consensus 154 ~pv~lElgGk~p~iV~~da-----Dl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~ 228 (456)
||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++
T Consensus 255 k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~ 334 (534)
T 2y53_A 255 ARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRND 334 (534)
T ss_dssp CEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTST
T ss_pred CcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcC
Confidence 9999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCC--CCCCCCccccceeeecCCCC--CccchhccccCceeEee
Q 012790 229 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL--SEGAVDQYFPPTVIVNVNHT--MKLMQEEAFGPIMPIMK 304 (456)
Q Consensus 229 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~--~~~~~g~~~~Ptvl~~v~~~--~~i~~eE~FGPvl~v~~ 304 (456)
++++||+++++|+++++++|+++ ++|+++++||..... .....|+|++|||+.+++++ |++++||+||||++|++
T Consensus 335 ~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~ 413 (534)
T 2y53_A 335 AVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAP 413 (534)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEE
T ss_pred CCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEE
Confidence 99999999999999999999999 689999999973210 01135899999999999987 69999999999999999
Q ss_pred eC---CH-----HHHHHHHhcCCCCceeEEecCCHHHHHHHHHhc--ccCCeeecCCccc-------ccCcCCCccCCCC
Q 012790 305 FN---TD-----EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI--QCGVAAINDFASN-------YMCQSLPFGGVKD 367 (456)
Q Consensus 305 ~~---~~-----~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l--~~G~v~iN~~~~~-------~~~~~~PfGG~~~ 367 (456)
|+ |+ ||||+++|+++|||++||||+|.++++++++++ ++|+|+||++... ...+.+||||+|+
T Consensus 414 ~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~ 493 (534)
T 2y53_A 414 YRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGR 493 (534)
T ss_dssp ECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGG
T ss_pred ECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCccc
Confidence 99 99 999999999999999999999999999999999 8999999986421 1245699999999
Q ss_pred CCCCCc-chHHHHhccceeeEEEEccc
Q 012790 368 SGFGRF-AGVEGLRACCLVKSVVEDRW 393 (456)
Q Consensus 368 SG~G~~-~g~~gl~~ft~~k~v~~~~~ 393 (456)
||+|++ +|.+|+++|++.|++...+.
T Consensus 494 SG~Gr~~~g~~~l~~~~~~k~v~~~p~ 520 (534)
T 2y53_A 494 AGGGEELGGLRALAFYHRRSAIQAASA 520 (534)
T ss_dssp GCSCCEESGGGGGGGGEEEEEEEEEHH
T ss_pred CCCCCCcchHHHHHHHhhhheeecCHH
Confidence 999999 69999999999999987653
No 44
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=7e-80 Score=688.69 Aligned_cols=373 Identities=23% Similarity=0.369 Sum_probs=343.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhCCcc-cCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEE
Q 012790 4 ASLGEIMTTCEKITWLLSEGEKWLKPEY-RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 82 (456)
Q Consensus 4 ~~~~Ei~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vvl 82 (456)
++..||..+++.++|+++.++++..... .+.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 606 ea~~Ev~~ai~~lr~~a~~a~~~~g~~~~~~~~---~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVl 682 (1001)
T 3haz_A 606 DALSELREAADFCRYYAAQGRKLFGSETAMPGP---TGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVA 682 (1001)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCEECCCC---TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCccccccCC---CCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEE
Confidence 3467999999999999999998865321 1211 24567899999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhcc---CCccc
Q 012790 83 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LTPVT 157 (456)
Q Consensus 83 Kps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~---~~pv~ 157 (456)
|||+.+|+++..+++++. ++|+|+|++|+|+|+++.++.|++ +||+|+||||+++|+.|++.++++ ++|++
T Consensus 683 KPse~tp~ta~~l~ell~----eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~ 758 (1001)
T 3haz_A 683 KPAEQTPRIAREAVALLH----EAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLI 758 (1001)
T ss_dssp ECCTTCHHHHHHHHHHHH----HHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEE
T ss_pred ecchhhHHHHHHHHHHHH----HhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEE
Confidence 999999999999888765 689999999999998755999998 799999999999999999998864 89999
Q ss_pred ccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccC
Q 012790 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 237 (456)
Q Consensus 158 lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~ 237 (456)
+|||||||+||++|||++.|++.+++|+|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||+++
T Consensus 759 lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~ 838 (1001)
T 3haz_A 759 AETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVID 838 (1001)
T ss_dssp EECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSC
T ss_pred eecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCC--HHHHHHHH
Q 012790 238 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLA 315 (456)
Q Consensus 238 ~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~--~~eai~~~ 315 (456)
+.+++++.++|++++++| ++ +||.. +..|+|++|||+.+ +++.+++||+||||++|++|++ +||||+++
T Consensus 839 ~~~~~rv~~~i~~a~~~g-~v-~gg~~-----~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~a 909 (1001)
T 3haz_A 839 VEAKQRLDAHIARMKTEA-RL-HFAGP-----APEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAI 909 (1001)
T ss_dssp HHHHHHHHHHHHHHHHHS-EE-EEECC-----CCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC-eE-ecccc-----CCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHH
Confidence 999999999999999888 88 88873 34599999999985 6889999999999999999986 89999999
Q ss_pred hcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeEEEEcc
Q 012790 316 NDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 316 n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|+++|||++||||+|.++++++++++++|+|+||+...+...+.+||||+|.||+| +.+|++||++||+.|+|+.+.
T Consensus 910 N~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 910 ERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp HHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred HcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 99999999999999999999999999999999999876665567899999999999 567899999999999998865
No 45
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.3e-80 Score=653.61 Aligned_cols=369 Identities=17% Similarity=0.212 Sum_probs=332.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhh--hhCCccc---CCCcccccccceEEEecceEEEEEcCCccchHhhH--HHHHHHHhcC
Q 012790 5 SLGEIMTTCEKITWLLSEGEK--WLKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF--NPMLAAVFSG 77 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~--~~~~~ALaaG 77 (456)
+..|+..+++.++|+++.+++ |+.+... +..........+++++|+|||++|+|||||+.+.+ +++++||++|
T Consensus 120 a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaG 199 (528)
T 3v4c_A 120 LNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAG 199 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcC
Confidence 457999999999999999987 6654321 11000112456899999999999999999999865 9999999999
Q ss_pred CeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccC-
Q 012790 78 NGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL- 153 (456)
Q Consensus 78 N~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~- 153 (456)
|+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|++ +.+++|++ +||+|+||||+.+|+.|+++|++++
T Consensus 200 N~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~ 279 (528)
T 3v4c_A 200 CPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPE 279 (528)
T ss_dssp CCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSS
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccC
Confidence 9999999999999999999999999999999999999999965 78899998 8999999999999999999999999
Q ss_pred -CcccccCCCcceEEEcCCC---CHHHHHHHHHHHHhhCCCCCcccCCeEEEehh-hHHHHHHHHHHHHhccccCCCCCC
Q 012790 154 -TPVTLELGGKDAFIVCDDV---DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAG 228 (456)
Q Consensus 154 -~pv~lElgGk~p~iV~~da---Dl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~ 228 (456)
+|+++|||||||+||++|| |++.|++.+++++|.|+||.|+|++|||||++ ++|+|+++|++++++++.|
T Consensus 280 ~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~----- 354 (528)
T 3v4c_A 280 PIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ----- 354 (528)
T ss_dssp CCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE-----
T ss_pred CCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHHHHHHHHHHhcccC-----
Confidence 9999999999999999999 88999999999999999999999999999997 9999999999999998744
Q ss_pred CCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCC---CccchhccccCceeEeee
Q 012790 229 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT---MKLMQEEAFGPIMPIMKF 305 (456)
Q Consensus 229 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~---~~i~~eE~FGPvl~v~~~ 305 (456)
+.+||++++++.+++.++++ ++|+++++||.. .|+|++|||+.+++++ |++++||+||||++|++|
T Consensus 355 -~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~-------~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~ 423 (528)
T 3v4c_A 355 -TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES-------SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRV 423 (528)
T ss_dssp -ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC-------CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEE
T ss_pred -CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc-------CCceeccEEEEecCcccccChhhcccccCCeEEEEec
Confidence 57899999988888887764 479999999972 6899999999988887 899999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceeEEecC--CHHHHHHHHHhcc--cCCeeecCCcccc-cCcCCCccC-CCCCCCCCcc--hHH
Q 012790 306 NTDEEVVKLANDSRYGLGCAVFSG--SQHRAREIAAQIQ--CGVAAINDFASNY-MCQSLPFGG-VKDSGFGRFA--GVE 377 (456)
Q Consensus 306 ~~~~eai~~~n~~~~gL~~~vft~--d~~~~~~~~~~l~--~G~v~iN~~~~~~-~~~~~PfGG-~~~SG~G~~~--g~~ 377 (456)
+|+||||+++|+++|||++||||+ |.+++++++++++ +|+|+||++.+.. ..+.+|||| +|.||+|++| |++
T Consensus 424 ~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~ 503 (528)
T 3v4c_A 424 GSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTM 503 (528)
T ss_dssp SSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGG
T ss_pred CCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHH
Confidence 999999999999999999999999 8899999999998 9999999975532 346799999 9999999987 999
Q ss_pred HHhccceeeEEE
Q 012790 378 GLRACCLVKSVV 389 (456)
Q Consensus 378 gl~~ft~~k~v~ 389 (456)
|+++|++.|++.
T Consensus 504 gl~~~~~~k~~q 515 (528)
T 3v4c_A 504 SIRRFLRPVAYQ 515 (528)
T ss_dssp GGGGGEEEEEEE
T ss_pred HHHHhchhHHhh
Confidence 999999999853
No 46
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=4.4e-79 Score=645.87 Aligned_cols=367 Identities=16% Similarity=0.216 Sum_probs=328.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhh--hhCCcccCC-Ccccc-c-ccceEEEecceEEEEEcCCccchHhh--HHHHHHHHhcC
Q 012790 5 SLGEIMTTCEKITWLLSEGEK--WLKPEYRSS-GRSMI-H-KKAKVEFHPLGVVGAIVSWNYPFHNI--FNPMLAAVFSG 77 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~--~~~~~~~~~-~~~~~-~-~~~~~~~~P~GVv~vi~p~N~P~~~~--~~~~~~ALaaG 77 (456)
+..|+..+++.++|+++++++ |+++..... +.... + ...+++++|+|||++|+|||||+.++ .+++++||++|
T Consensus 87 a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaG 166 (510)
T 1ez0_A 87 LTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAG 166 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcC
Confidence 467999999999999999987 765432110 00000 1 13589999999999999999999985 49999999999
Q ss_pred CeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-hHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccC-
Q 012790 78 NGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL- 153 (456)
Q Consensus 78 N~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~- 153 (456)
|+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|+ .+.+++|++ .+|+|+||||+++|+.|+++|++++
T Consensus 167 N~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~ 246 (510)
T 1ez0_A 167 CPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPE 246 (510)
T ss_dssp CCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSS
T ss_pred CEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCC
Confidence 999999999999999999999999999999999999999995 578999998 7999999999999999999999986
Q ss_pred -CcccccCCCcceEEEcCCCCHH--HHHHHHHHHHhhCCCCCcccCCeEEEehh-hHHHHHHHHHHHHhccccCCCCCCC
Q 012790 154 -TPVTLELGGKDAFIVCDDVDVP--HVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGK 229 (456)
Q Consensus 154 -~pv~lElgGk~p~iV~~daDl~--~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~~ 229 (456)
||+++|||||||+||++|||++ .|++.+++++|.|+||.|+|++|||||++ ++|+|+++|+++++++++
T Consensus 247 ~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~------- 319 (510)
T 1ez0_A 247 PIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP------- 319 (510)
T ss_dssp CCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC-------
T ss_pred CccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC-------
Confidence 9999999999999999999999 99999999999999999999999999998 999999999999999863
Q ss_pred CccccccCHHHHHHHHHHHHHHHh-cCCeEeecCCCCCCCCCCCCccccceeeecCCCC---CccchhccccCceeEeee
Q 012790 230 YDMGALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT---MKLMQEEAFGPIMPIMKF 305 (456)
Q Consensus 230 ~~~gpli~~~~~~~v~~~i~~a~~-~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~---~~i~~eE~FGPvl~v~~~ 305 (456)
||++++.+.+++.++|+++++ +|+++++||. +|+|++|||+.+++++ |++++||+||||++|++|
T Consensus 320 ---gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~--------~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~ 388 (510)
T 1ez0_A 320 ---STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA--------ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVC 388 (510)
T ss_dssp ---BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC--------CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEE
T ss_pred ---CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC--------CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEe
Confidence 678889999999999999984 7999999986 2899999999988877 999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceeEEecCCH--HHHHHHHHhc--ccCCeeecCCcccc-cCcCCCccC-CCCCCCCC--cchHH
Q 012790 306 NTDEEVVKLANDSRYGLGCAVFSGSQ--HRAREIAAQI--QCGVAAINDFASNY-MCQSLPFGG-VKDSGFGR--FAGVE 377 (456)
Q Consensus 306 ~~~~eai~~~n~~~~gL~~~vft~d~--~~~~~~~~~l--~~G~v~iN~~~~~~-~~~~~PfGG-~~~SG~G~--~~g~~ 377 (456)
+|+||||+++|+++|||++||||+|. ++++++++++ ++|+|+||++.... ..+.+|||| +|.||+|+ .+|++
T Consensus 389 ~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~ 468 (510)
T 1ez0_A 389 ENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAE 468 (510)
T ss_dssp SSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGG
T ss_pred CCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHH
Confidence 99999999999999999999999987 7899999999 79999999875432 234689999 79999985 48999
Q ss_pred HHhccceeeEEE
Q 012790 378 GLRACCLVKSVV 389 (456)
Q Consensus 378 gl~~ft~~k~v~ 389 (456)
||++|++.|++.
T Consensus 469 gl~~~~~~k~~~ 480 (510)
T 1ez0_A 469 AIHRWLRPVAYQ 480 (510)
T ss_dssp GGGGGEEEEEEE
T ss_pred HHHHhheEEEEc
Confidence 999999888764
No 47
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=6.7e-74 Score=599.42 Aligned_cols=342 Identities=14% Similarity=0.138 Sum_probs=271.9
Q ss_pred HHHHHH-HHHHHHHHHHhhhhhhCCcccCCCc-c---c-ccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCe
Q 012790 6 LGEIMT-TCEKITWLLSEGEKWLKPEYRSSGR-S---M-IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNG 79 (456)
Q Consensus 6 ~~Ei~~-~~~~i~~~~~~~~~~~~~~~~~~~~-~---~-~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~ 79 (456)
..|+.. +++.++|+++.+++|.+++...... . . .+...+++++|+|||++|+||| | .++++++++||++||+
T Consensus 77 ~~ev~~~~~~~~~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~ 154 (468)
T 1vlu_A 77 LKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNA 154 (468)
T ss_dssp HHHHCTTSTTHHHHHHHHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCE
T ss_pred HHHHhhhhHHHHHHHHHHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCE
Confidence 467877 8899999999999987543210010 0 0 1335689999999999999999 9 9999999999999999
Q ss_pred EEEecCCCChhHHHHHHHHHHHHHHH----cCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhcc
Q 012790 80 IVIKVSENASWSGCFYFRIIQAALAA----VGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT 152 (456)
Q Consensus 80 VvlKps~~~p~~~~~l~~l~~~~l~~----aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~ 152 (456)
||+|||+.+|+++.++++++.++|.+ +|+|+|++|+|+ ++ +.++.|++ ++|+|+||||+++|+.|++.+
T Consensus 155 VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a--- 230 (468)
T 1vlu_A 155 AILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT--- 230 (468)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---
T ss_pred EEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---
Confidence 99999999999999999999999999 999999999999 65 67888887 799999999999999999887
Q ss_pred CCcccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhcccc---CCCCCCC
Q 012790 153 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGK 229 (456)
Q Consensus 153 ~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---g~~~~~~ 229 (456)
+||+++|||||||+||++|||++.|++.+++++|.|+| .|+|++|||||+++ |+|+++|.++++++++ |+|.+
T Consensus 231 ~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-- 306 (468)
T 1vlu_A 231 KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-- 306 (468)
T ss_dssp CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH--
T ss_pred CCCEEeecCCccceEECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH--
Confidence 69999999999999999999999999999999999999 99999999999999 9999999999999987 77532
Q ss_pred CccccccCHHHHHHHHHH-HHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCH
Q 012790 230 YDMGALCLLEHSEKLQNL-VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 308 (456)
Q Consensus 230 ~~~gpli~~~~~~~v~~~-i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 308 (456)
+++ |++++ ++++||. | ++||++ ++++|++++||+||||++|++|+|+
T Consensus 307 ---------------~~~~i~~a~----~~~~gG~---------g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~ 354 (468)
T 1vlu_A 307 ---------------KTAYFDKLN----ELGKLTE---------A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTST 354 (468)
T ss_dssp ---------------HHHHHHHHH----HHTCCCH---------H--HHTTBC---------------CCCCEEEECCSH
T ss_pred ---------------hcccccccc----eeeccCC---------C--CCCcee--eCCCchhhhcCccCceEEEEEeCCH
Confidence 345 66664 4666664 4 689997 7899999999999999999999999
Q ss_pred HHHHHHHhcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCcc-----CCCCCCCCCcchHHHHhccc
Q 012790 309 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFG-----GVKDSGFGRFAGVEGLRACC 383 (456)
Q Consensus 309 ~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfG-----G~~~SG~G~~~g~~gl~~ft 383 (456)
||||+++|+++|||++||||+|.++++++++++++|.|+||++... .+.+||| |+|.||+|++ |++|+++|+
T Consensus 355 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~ 431 (468)
T 1vlu_A 355 ESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRF--ADGFRYGFGAEVGISTSKIHAR-GPVGLDGLV 431 (468)
T ss_dssp HHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGG--CC-----------------------CCSGGGE
T ss_pred HHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCC--CCCCCCCCCCCcceecCCCCCC-cchHHHHhc
Confidence 9999999999999999999999999999999999999999997643 3458999 9999999999 999999999
Q ss_pred eeeEEEEcc
Q 012790 384 LVKSVVEDR 392 (456)
Q Consensus 384 ~~k~v~~~~ 392 (456)
+.|+|+.+.
T Consensus 432 ~~K~v~~~~ 440 (468)
T 1vlu_A 432 SYQYQIRGD 440 (468)
T ss_dssp EEEEEEECS
T ss_pred ceEEEEECC
Confidence 999998764
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=1.2e-72 Score=590.42 Aligned_cols=351 Identities=17% Similarity=0.207 Sum_probs=311.7
Q ss_pred HHHHHHhhhhhhCCcccCCCcc-cccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHH
Q 012790 16 ITWLLSEGEKWLKPEYRSSGRS-MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 94 (456)
Q Consensus 16 i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~ 94 (456)
.++..+....|+++.+...... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~ 153 (464)
T 3k9d_A 74 NVFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILE 153 (464)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH
T ss_pred HHHHHHHHHHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHH
Confidence 3455555555655432111111 124567889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCC-hHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC-CcceEEEcC
Q 012790 95 YFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG-GKDAFIVCD 170 (456)
Q Consensus 95 l~~l~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg-Gk~p~iV~~ 170 (456)
+++++.+++.++|+|+|++++|+|. .+.+++|++ ++|+|+||||+. +++++++++||+ +|+| ||||+||++
T Consensus 154 l~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~ 228 (464)
T 3k9d_A 154 TVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIER 228 (464)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECT
T ss_pred HHHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECC
Confidence 9999999999999999999999995 588999998 799999999998 466778899999 8998 999999999
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHH-------hccccCCCC-CCCCccccccCHHHHH
Q 012790 171 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV-------KSVSAGPPL-AGKYDMGALCLLEHSE 242 (456)
Q Consensus 171 daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~-------~~~~~g~~~-~~~~~~gpli~~~~~~ 242 (456)
|||++.|++.|++|+|.|+||+|+|++|||||+++||+|+++|+++. +.+++|++. ++++++||+++.++++
T Consensus 229 dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~ 308 (464)
T 3k9d_A 229 SANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQ 308 (464)
T ss_dssp TSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHH
Confidence 99999999999999999999999999999999999999999999986 456778887 6788999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHH----HHHhcC
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV----KLANDS 318 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai----~~~n~~ 318 (456)
++.+++++++.+|+++++||.. ++++++++. ||+||||++|++|+|+|||| +++|++
T Consensus 309 ~i~~~~~~a~~~ga~vl~gg~~------------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~ 369 (464)
T 3k9d_A 309 HIANLAGLTVPADARVLIAEET------------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHE 369 (464)
T ss_dssp HHHHHTTCCCCTTCCEEEEECC------------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHT
T ss_pred HHHHHhhhhhcCCCEEEEcCCC------------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcC
Confidence 9999999888899999999861 467788865 89999999999999999997 799999
Q ss_pred CCCceeEEecCCHHHHHHHHHhcccCCeeecCCccc-------ccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 319 RYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 319 ~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~-------~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
+|||++||||+|.++++++++++++|+|+||++..+ ...+.+|||| |.+|.|+++|..|+++|++.|+|.+.
T Consensus 370 ~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 370 GAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp TTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred CCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 999999999999999999999999999999997653 2356799998 88999999999999999999999763
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.2e-72 Score=589.13 Aligned_cols=333 Identities=17% Similarity=0.176 Sum_probs=282.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..||..+++.++|+++++++|.++.. +......+...+++++|+|||++|+||| |+..+ +++++||++||+||+||
T Consensus 97 a~~ev~~~~~~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKp 173 (463)
T 2h5g_A 97 STSKLNSLAIGLRQIAASSQDSVGRVL-RRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKG 173 (463)
T ss_dssp CHHHHHHHHHHHHHHHHHCTTSTTCEE-EEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEEC
T ss_pred hHHHHHHHHHHHHHHHHhhHhhcCccc-ccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEEC
Confidence 357999999999999999988876532 2110012335689999999999999887 77776 89999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++.++++++.++|.++| |+|++|+|+|+.+.++.|++ ++|+|+||||+.+|+.|+++|+ +||+++||||
T Consensus 174 s~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv~lElGG 250 (463)
T 2h5g_A 174 GKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPVMGHSEG 250 (463)
T ss_dssp CGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCBCSCSCC
T ss_pred CCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCEEEecCC
Confidence 99999999999999999988889 99999999995578899987 7999999999999999999988 9999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.| ||.|+|++|||||++++| ||+ ++
T Consensus 251 k~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p~-----~~ 299 (463)
T 2h5g_A 251 ICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TPL-----FD 299 (463)
T ss_dssp CEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SHH-----HH
T ss_pred cceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hHH-----HH
Confidence 99999999999999999999999999 999999999999999998 232 33
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
+++++++++|++++.|+.. ...++|+ +++|++++||+||||++|++|+|+||||+++|++++||
T Consensus 300 ---~~i~~~~~~Ga~v~~G~~~-----~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gL 363 (463)
T 2h5g_A 300 ---QIIDMLRVEQVKIHAGPKF-----ASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSH 363 (463)
T ss_dssp ---HHHHHHHHTTCEEEECHHH-----HC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSS
T ss_pred ---HHHHHHHhCCCEEEeCCcc-----cccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCc
Confidence 3578888899999855431 1234442 57899999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC--Cc--chHHHHhccceeeEEEEcc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RF--AGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G--~~--~g~~gl~~ft~~k~v~~~~ 392 (456)
++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+| ++ +|++||++||+.|+|+.+.
T Consensus 364 aa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 364 TDVIVTEDENTAEFFLQHVDSACVFWNASTRF--SDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp EEEEECSCHHHHHHHHHHCCSSEEEESSCGGG--CSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred eEEEEeCCHHHHHHHHHhCCeeEEEEeCCccC--CCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 99999999999999999999999999997543 356999999999999 76 9999999999999998865
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=8.4e-71 Score=573.30 Aligned_cols=331 Identities=19% Similarity=0.227 Sum_probs=275.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCC
Q 012790 8 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 87 (456)
Q Consensus 8 Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~ 87 (456)
|+..+++.++|+++..+. . .+..+......+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.
T Consensus 98 ~v~~~~~~l~~~a~~~~~-~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~ 173 (444)
T 4ghk_A 98 ALKTMVEGLRQVATLPDP-I-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSE 173 (444)
T ss_dssp HHHHHHHHHHHHHHSCCC-T-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGG
T ss_pred HHHHHHHHHHHHHhhccc-c-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCcc
Confidence 677778888887766542 1 11111100012346789999999999999998 8 688999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-h-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCc
Q 012790 88 ASWSGCFYFRIIQAALAAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163 (456)
Q Consensus 88 ~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~-~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk 163 (456)
+|+++.++++++.++|.++|+|+|++|+|+|+ . +.++.|.. ++|+|+||||+.+|+.|++.+ +||+++|||||
T Consensus 174 tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk 250 (444)
T 4ghk_A 174 ALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGI 250 (444)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCC
T ss_pred chHHHHHHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCc
Confidence 99999999999999999999999999999984 4 46777765 799999999999999999877 69999999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhcccc---CCCCCCCCccccccCHHH
Q 012790 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 164 ~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---g~~~~~~~~~gpli~~~~ 240 (456)
||+||++|||++.|++.+++++|.|+| .|+|++|||||++++|+|+++|+++++++++ |+|.
T Consensus 251 ~p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-------------- 315 (444)
T 4ghk_A 251 CHVYVDDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-------------- 315 (444)
T ss_dssp CEEEECTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH--------------
T ss_pred CeEEECCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH--------------
Confidence 999999999999999999999999999 9999999999999999999999999999987 6542
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
..++++++. . | ++ ++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 316 ---~~~~i~~a~--------~-----------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~ 365 (444)
T 4ghk_A 316 ---ARAVLEAAG--------V-----------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGS 365 (444)
T ss_dssp ---HHHHHHHTT--------C-----------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSC
T ss_pred ---HHHHHHhcc--------c-----------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCC
Confidence 135565431 0 1 12 3567899999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC----CcchHHHHhccceeeEEEEcc
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG----RFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G----~~~g~~gl~~ft~~k~v~~~~ 392 (456)
||++||||+|.++++++++++++|+|+||++... .+.+||||.+.||+| +++|++||++||+.|+|+...
T Consensus 366 gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~--~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 366 HHTDAIVTEDHDRAMRFLREVDSASVMVNASTRF--ADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp SSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGG--CSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CceEEEEeCCHHHHHHHHHhCCcceEEEcCCCcc--CCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 9999999999999999999999999999997654 346899999999998 789999999999999998765
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1.1e-70 Score=569.75 Aligned_cols=330 Identities=19% Similarity=0.194 Sum_probs=285.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 86 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 86 (456)
.|+..+++.++|+++.+++ .. +..+......+...+++++|+|||++|+||| +.++++++++||++||+||+|||+
T Consensus 85 ~ev~~~~~~l~~~a~~~~~-~g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~ 160 (427)
T 1o20_A 85 KRIDEMIKACETVIGLKDP-VG-EVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGS 160 (427)
T ss_dssp HHHHHHHHHHHHHHHSCCC-TT-CEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCG
T ss_pred HHHHHHHHHHHHHHhcccc-cC-ccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCH
Confidence 5888889999988876653 21 1111000001234688999999999999886 478999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHcCCCCCcEEEEeC-Ch-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 87 NASWSGCFYFRIIQAALAAVGAPENLVDVITG-FA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 87 ~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g-~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
.+|+++.++++++.++|.++|+|+|++|+|+| +. +.++.|.. ++|+|+||||+++|+.|++++ +||+++||||
T Consensus 161 ~tp~t~~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGG 237 (427)
T 1o20_A 161 DALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVG 237 (427)
T ss_dssp GGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCC
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCC
Confidence 99999999999999999999999999999998 44 45777775 899999999999999999988 5999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+| .|+|++|||||++++|+|+++|++++++++++
T Consensus 238 k~p~iV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------- 297 (427)
T 1o20_A 238 NCHIFVDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------- 297 (427)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-------------------
T ss_pred CceEEEeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-------------------
Confidence 9999999999999999999999999999 99999999999999999999999999987642
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
+.||.. ..+ |+ ||| ++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 298 ----------------~~gg~~------~~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL 350 (427)
T 1o20_A 298 ----------------VRGCEK------TRE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGH 350 (427)
T ss_dssp ----------------EEECHH------HHH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSS
T ss_pred ----------------eecChh------hhh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCC
Confidence 223321 012 33 886 346789999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC----CcchHHHHhccceeeEEEEcc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG----RFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G----~~~g~~gl~~ft~~k~v~~~~ 392 (456)
++||||+|.++++++++++++|+|+||++... .+.+||||.|+||+| +++|++|+++||+.|+|+.+.
T Consensus 351 ~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~--~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 351 SESILTENYSNAKKFVSEIDAAAVYVNASTRF--TDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp EEEEECSCHHHHHHHHHHCCSSEEEESSCGGG--CSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred eEEEEeCCHHHHHHHHHhCCccEEEECCCCcc--CCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 99999999999999999999999999987543 346899999999997 478999999999999998764
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.8e-66 Score=542.00 Aligned_cols=321 Identities=17% Similarity=0.227 Sum_probs=271.1
Q ss_pred ccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-
Q 012790 41 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF- 119 (456)
Q Consensus 41 ~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~- 119 (456)
...++.++|+|||++|+|||||++++++++++||++||+||+||||.+|.++..+++++.+++.++|+|+|++|+|+|.
T Consensus 95 ~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~ 174 (452)
T 3my7_A 95 LGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPS 174 (452)
T ss_dssp --CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCC
T ss_pred CceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCC
Confidence 4568899999999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred hHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCC
Q 012790 120 AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 197 (456)
Q Consensus 120 ~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~ 197 (456)
.+.+++|++ ++|+|+||||+.++ +++++++||+++|+|||||+||++|||++.|++.+++|+|.|+||.|+|++
T Consensus 175 ~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~ 250 (452)
T 3my7_A 175 VELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQ 250 (452)
T ss_dssp HHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEE
T ss_pred HHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCc
Confidence 488999998 89999999999854 467788999999999999999999999999999999999999999999999
Q ss_pred eEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccc
Q 012790 198 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 277 (456)
Q Consensus 198 ~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~ 277 (456)
|||||+++||+|+++|+++ .||+++++++++++++++++.+.|+++ .||..... ....|+|++
T Consensus 251 rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~-~~~~G~~v~ 313 (452)
T 3my7_A 251 AVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAI-AEMAGVKVP 313 (452)
T ss_dssp EEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHH-HHHHTCCCC
T ss_pred EEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchh-HHhCCceeC
Confidence 9999999999999999874 399999999999999998766667776 46642100 013589999
Q ss_pred cee-------eecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC----CCceeEEecCCHHHHHH---HHHhccc
Q 012790 278 PTV-------IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR----YGLGCAVFSGSQHRARE---IAAQIQC 343 (456)
Q Consensus 278 Ptv-------l~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~----~gL~~~vft~d~~~~~~---~~~~l~~ 343 (456)
||+ ++++++++++++ |+||||++|++|+|+||||+++|++. |||++||||+|.+.+++ +++++++
T Consensus 314 pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~ 392 (452)
T 3my7_A 314 ADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKT 392 (452)
T ss_dssp TTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCC
T ss_pred CCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCE
Confidence 998 778999999886 89999999999999999999999985 99999999999877777 9999999
Q ss_pred CCeeecCCcccccCcCCCccCCCCC-----------CCCCcc-----hHHHHhccceeeEEEEc
Q 012790 344 GVAAINDFASNYMCQSLPFGGVKDS-----------GFGRFA-----GVEGLRACCLVKSVVED 391 (456)
Q Consensus 344 G~v~iN~~~~~~~~~~~PfGG~~~S-----------G~G~~~-----g~~gl~~ft~~k~v~~~ 391 (456)
|+|+||++ .||||+|.. |.|.++ +.-+.+.+.+.|+|.+.
T Consensus 393 G~V~VN~~--------~~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~~ 448 (452)
T 3my7_A 393 ARILINIP--------TTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKR 448 (452)
T ss_dssp SEEEESCC--------CC----------------------------CCCCCGGGGEEEEEEECC
T ss_pred EEEEECCC--------CCCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEee
Confidence 99999984 355555431 333333 34455666677776554
No 53
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=97.10 E-value=0.28 Score=49.36 Aligned_cols=280 Identities=16% Similarity=0.160 Sum_probs=158.3
Q ss_pred HHHHHHHHHHhhhhhhCCcccCCCcc---cccccceEEEecceEEEEEcCC---ccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 12 TCEKITWLLSEGEKWLKPEYRSSGRS---MIHKKAKVEFHPLGVVGAIVSW---NYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 12 ~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~vi~p~---N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..+.|+...++.+++-+.|... ... ..+.....++.|+--|++..|. -|| ++.++..+||-.||+.=|+-.+
T Consensus 84 ~~~ai~~A~~nI~~fH~~Q~~~-~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~t 161 (434)
T 1kae_A 84 LKQAMAVAVKNIETFHTAQKLP-PVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCS 161 (434)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCC-CEEEEEETTEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCC-CceEEecCCcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEEC
Confidence 3455556666665554333321 211 1233455678999999999997 355 5567778899999987555433
Q ss_pred C--CChhHHHHHHHHHHHHHHHcCCCCCcEEEEe-CChHhHHHHHh------ccCEEEecCCHHHHHHHHHHhhc-cCCc
Q 012790 86 E--NASWSGCFYFRIIQAALAAVGAPENLVDVIT-GFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASK-TLTP 155 (456)
Q Consensus 86 ~--~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~-g~~~~~~~L~~------~vd~i~fTGS~~~g~~v~~~aa~-~~~p 155 (456)
| .+|.+ |+ +...+|..+ +.. |+...-.+|.- +||+|+=.|..=+..+ +.... ....
T Consensus 162 Pp~i~p~i---L~-----AA~l~Gv~e----Iy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~A--Kr~Vs~~~G~ 227 (434)
T 1kae_A 162 PPPIADEI---LY-----AAQLCGVQD----VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEA--KRQVSQRLDG 227 (434)
T ss_dssp CSSCCHHH---HH-----HHHHTTCCE----EEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHHHCTTS
T ss_pred CCCCCHHH---HH-----HHHHcCCCE----EeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHH--HHHhHhhcCc
Confidence 3 33332 21 123467654 222 54455555542 8999998888765331 11110 0111
Q ss_pred ccccC-CCcceEEE--cCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEeh--hhHHHHHHHHHHHHhccccCCCCCCCC
Q 012790 156 VTLEL-GGKDAFIV--CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR--DIYALFVSQVAKIVKSVSAGPPLAGKY 230 (456)
Q Consensus 156 v~lEl-gGk~p~iV--~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~g~~~~~~~ 230 (456)
|-..+ .|.|=++| |++||.+..+..++..+=+.. .| +.++|.. +..++..+.+.+.++.+.
T Consensus 228 VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEHd~----~a-~aiLvT~s~~la~~V~~ev~~ql~~lp--------- 293 (434)
T 1kae_A 228 AAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGP----DS-QVILLTPAADMARRVAEAVERQLAELP--------- 293 (434)
T ss_dssp CEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTCT----TC-EEEEEESCHHHHHHHHHHHHHHHTTCT---------
T ss_pred cccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCC----CC-cEEEEECCHHHHHHHHHHHHHHHHhCC---------
Confidence 22222 25555443 446899988877776554332 23 3445543 444555444444444331
Q ss_pred ccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHH
Q 012790 231 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEE 310 (456)
Q Consensus 231 ~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~e 310 (456)
. .+.++.+. ..- .|+.++|++|
T Consensus 294 ---------r----~~ia~~sl--------------------------------------------~~~-~ii~v~~l~e 315 (434)
T 1kae_A 294 ---------R----AETARQAL--------------------------------------------NAS-RLIVTKDLAQ 315 (434)
T ss_dssp ---------T----HHHHHHHH--------------------------------------------TTC-EEEECSSHHH
T ss_pred ---------h----HHHHHHHH--------------------------------------------HcC-eEEEECCHHH
Confidence 0 11122221 112 3556899999
Q ss_pred HHHHHhcCCCCceeEEecCCHHHHHHHHHhcc-cCCeeecCCccc-------ccCcCCCccCCCCCCCCCcchHHHHhcc
Q 012790 311 VVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-CGVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRAC 382 (456)
Q Consensus 311 ai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~-~G~v~iN~~~~~-------~~~~~~PfGG~~~SG~G~~~g~~gl~~f 382 (456)
|++++|..- +=..-|.++|.. .+..+++ +|.|++..+..- ..++-+| .+|..|+.|.-+.+.|
T Consensus 316 a~~~~N~~A-PEHLel~~~dp~---~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLP-----T~G~AR~~sgLsV~~F 386 (434)
T 1kae_A 316 CVEISNQYG-PEHLIIQTRNAR---ELVDSITSAGSVFLGDWSPESAGDYASGTNHVLP-----TYGYTATCSSLGLADF 386 (434)
T ss_dssp HHHHHHHHC-CSEEEEESTTHH---HHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCC-----CTTGGGTCCCSCGGGG
T ss_pred HHHHHHHhh-hHhhhhhhcCHH---HHHhhcCcccchhcCCCCchhhcccccCCCcccC-----CCCceeccCCCcHHhc
Confidence 999999842 235778888864 5667775 899999965221 1123344 3566777777788888
Q ss_pred ceeeEE
Q 012790 383 CLVKSV 388 (456)
Q Consensus 383 t~~k~v 388 (456)
...-++
T Consensus 387 ~K~~s~ 392 (434)
T 1kae_A 387 QKRMTV 392 (434)
T ss_dssp EEEEEE
T ss_pred cceeeE
Confidence 765554
No 54
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=96.88 E-value=0.45 Score=47.82 Aligned_cols=254 Identities=17% Similarity=0.216 Sum_probs=142.3
Q ss_pred cccceEEEecceEEEEEcCCc---cchHhhHHHHHHHHhcCCeEE--EecCCCChhHHHHHHHHHHHHHHHcCCCCCcEE
Q 012790 40 HKKAKVEFHPLGVVGAIVSWN---YPFHNIFNPMLAAVFSGNGIV--IKVSENASWSGCFYFRIIQAALAAVGAPENLVD 114 (456)
Q Consensus 40 ~~~~~~~~~P~GVv~vi~p~N---~P~~~~~~~~~~ALaaGN~Vv--lKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~ 114 (456)
+.....++.|+--|++..|.- || ++.++..+||-.||+.=| .-|++..-.....|+ +...+|..+
T Consensus 120 G~~~g~~~~Pi~~VGlYVPGG~A~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~-----AA~l~Gv~e---- 189 (423)
T 4gic_A 120 GTLLGQKITPLDRVGLYVPGGKAAYP-SSVLMNAVPAKVAGVPELIMAVPAPRGELNALVLA-----AAYISGVDR---- 189 (423)
T ss_dssp SCEEEEEEEECSEEEEECCCSTTCCH-HHHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHH-----HHHHHTCCE----
T ss_pred CCEEEEEEEEecceeEEeeCCCCchh-hHHHHhhccHHHhCCCeEEEecCCCCCCccHHHHH-----HHHhcCCcE----
Confidence 344567899999999999954 55 556777889999999633 334322111111121 123466654
Q ss_pred EEe-CChHhHHHHHh------ccCEEEecCCHHHHHHHHHHhhccCCcccccC-CCcceEEE--cCCCCHHHHHHHHHHH
Q 012790 115 VIT-GFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL-GGKDAFIV--CDDVDVPHVAQIAVRA 184 (456)
Q Consensus 115 vv~-g~~~~~~~L~~------~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl-gGk~p~iV--~~daDl~~aa~~i~~~ 184 (456)
+.. |+...-.+|.- .||+|+=.|..=+..+ ++... ..|-..+ .|.+=++| +++||.+..|..++..
T Consensus 190 Iy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v~--g~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQ 265 (423)
T 4gic_A 190 VFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLVF--GQVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQ 265 (423)
T ss_dssp EECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHB--TTBEECCCCCCCEEEEEECSCSCHHHHHHHHHHH
T ss_pred EEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHhc--CCcCcccccccceEEEEeCCCCCHHHHHHHHHHh
Confidence 333 44455555542 8999999998766432 22111 1122222 25554433 3458999888877766
Q ss_pred HhhCCCCCcccCCeEEEeh--hhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecC
Q 012790 185 ALQSSGQNCAGAERFYVHR--DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 262 (456)
Q Consensus 185 ~~~n~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG 262 (456)
+=+.. .| +.++|.. +..++..+.+.+.++.+. ..+ .+..+..+
T Consensus 266 AEHd~----~a-~~iLvT~s~~la~~V~~~i~~~l~~l~------------------r~~----i~~~sl~~-------- 310 (423)
T 4gic_A 266 AEHDE----DA-QAILISPDAAHLEAVQASIERLLPGME------------------RAE----VIRTSLER-------- 310 (423)
T ss_dssp HTTCT----TC-EEEEEESCHHHHHHHHHHHHHHGGGCT------------------THH----HHHHHHHH--------
T ss_pred hccCC----CC-eEEEEeCcHHHHHHHHHHHHHHHhhCc------------------cHH----HHHHHHhc--------
Confidence 54432 22 3445544 444555555555444431 011 11222111
Q ss_pred CCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCceeEEecCCHHHHHHHHHhcc
Q 012790 263 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 342 (456)
Q Consensus 263 ~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~ 342 (456)
+| .++.++|++|+++++|..- +=..-|.++|.. .+..+++
T Consensus 311 ---------------------------------~g---~ii~v~~~~ea~~~~N~~A-PEHLel~~~~~~---~~l~~i~ 350 (423)
T 4gic_A 311 ---------------------------------RG---GMILVDDLEQAAAVANRIA-PEHLELSVESPE---VLVESIR 350 (423)
T ss_dssp ---------------------------------HC---EEEECSSHHHHHHHHHHHC-CSEEEEESSCHH---HHGGGCC
T ss_pred ---------------------------------Cc---eEEEEeehHHHHHHHHhhC-hHHhhhhhCCHH---HHHhhCc
Confidence 11 2445799999999999842 235677888864 4777776
Q ss_pred -cCCeeecCCcccccCcCCCccCC--------CCCCCCCcchHHHHhccceeeEE
Q 012790 343 -CGVAAINDFASNYMCQSLPFGGV--------KDSGFGRFAGVEGLRACCLVKSV 388 (456)
Q Consensus 343 -~G~v~iN~~~~~~~~~~~PfGG~--------~~SG~G~~~g~~gl~~ft~~k~v 388 (456)
+|.|++..+.. .++|.+ ..+|..|+.+.-+.+.|...-++
T Consensus 351 nAGaIFlG~~tp------~~~GDY~aG~NHvLPT~G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 351 NAGAIFMGRYTA------EALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp CCSEEEEC----------------------CCCCTTGGGTCCCCCGGGGEEEEEE
T ss_pred EeceeecCCCCc------hhhhhcCcCCCccCCCCCcccccCCCCHHHeeeeeeE
Confidence 89999986421 223322 13577778887788888765554
No 55
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=75.37 E-value=6.3 Score=31.19 Aligned_cols=59 Identities=19% Similarity=0.215 Sum_probs=38.0
Q ss_pred CHHHHHHHHHHHHHHH-hcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHH
Q 012790 237 LLEHSEKLQNLVNDAL-DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLA 315 (456)
Q Consensus 237 ~~~~~~~v~~~i~~a~-~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~ 315 (456)
+++.+++..+....++ +.|++++..|. .|.++.+.. .+-+.|+.|+|.++|.++.
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~-------------~~~~~eG~~-----------~~~~viieFpS~~aa~~~~ 71 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGG-------------SVTELEGTA-----------RARNVVIEFPSVQHAIDCY 71 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESC-------------CEEEEESCC-----------CSEEEEEEESSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECC-------------CceEEecCC-----------cCeEEEEECCCHHHHHHHH
Confidence 4445555444444443 35888888765 255665421 2367799999999999998
Q ss_pred hcCC
Q 012790 316 NDSR 319 (456)
Q Consensus 316 n~~~ 319 (456)
|+-+
T Consensus 72 ~s~~ 75 (99)
T 2fiu_A 72 NSPE 75 (99)
T ss_dssp HSHH
T ss_pred cCHH
Confidence 8643
No 56
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=60.55 E-value=8.8 Score=33.02 Aligned_cols=116 Identities=13% Similarity=0.108 Sum_probs=74.0
Q ss_pred ecc-eEEEEEcCCcc-chHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeC--ChHhH
Q 012790 48 HPL-GVVGAIVSWNY-PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG--FAETG 123 (456)
Q Consensus 48 ~P~-GVv~vi~p~N~-P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g--~~~~~ 123 (456)
.|. |.|+++..-+- +-...+..-...+.+|..++- |.-|+..|.+ ..|++-..++=++- +...+
T Consensus 8 ~p~~g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~A-----T~gTa~~L~e-------~~Gl~v~~v~k~~eGG~p~I~ 75 (152)
T 1b93_A 8 LPARKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA-----TGTTGNLISR-------ATGMNVNAMLSGPMGGDQQVG 75 (152)
T ss_dssp ECSSCEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEE-----ETTHHHHHHH-------HHCCCCEEECCGGGTHHHHHH
T ss_pred CCCCCEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEE-----ccHHHHHHHH-------HhCceeEEEEecCCCCCchHH
Confidence 343 65655544433 455555555566777888775 2344543322 17999876653332 22456
Q ss_pred HHHHh-ccCEEEecCC-------HHHHHHHHHHhhccCCcccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCC
Q 012790 124 EALVS-SVDKIIFVGS-------PGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 190 (456)
Q Consensus 124 ~~L~~-~vd~i~fTGS-------~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~G 190 (456)
+.+.+ .+|.|+||=+ ..-+..|.+.|..+-.|+.--+ ..|+.++.+.+++..
T Consensus 76 d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 76 ALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp HHHHTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred HHHHCCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 66666 9999999876 4567889999998888877544 556677777776664
No 57
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=56.57 E-value=46 Score=25.72 Aligned_cols=61 Identities=16% Similarity=0.187 Sum_probs=38.7
Q ss_pred cCHHHHHHHHHHHHHHHh-cCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHH
Q 012790 236 CLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKL 314 (456)
Q Consensus 236 i~~~~~~~v~~~i~~a~~-~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~ 314 (456)
.+++.+++..+....+++ -|++++..| . +.++.+.. . ..-+.|+.|+|.+.|.++
T Consensus 14 ~d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~-------------~~~lEG~~---------~-~~~~viieFps~~aa~a~ 69 (94)
T 3lo3_A 14 KDAEKLQQYGARVASTLAKYSGEVLVKG-S-------------VEQLHGKF---------E-HKAQVILEFPSREDAYNW 69 (94)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCEEEEEE-E-------------CEEEESCC---------C-CSEEEEEEESSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEc-c-------------cccccCCC---------C-CCeEEEEECCCHHHHHHH
Confidence 445555555555555543 377887766 3 34444321 1 256789999999999999
Q ss_pred HhcCCC
Q 012790 315 ANDSRY 320 (456)
Q Consensus 315 ~n~~~~ 320 (456)
.|+-.|
T Consensus 70 y~SpeY 75 (94)
T 3lo3_A 70 YHSEEY 75 (94)
T ss_dssp HHSHHH
T ss_pred HCCHHH
Confidence 887543
No 58
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=47.57 E-value=10 Score=33.42 Aligned_cols=120 Identities=13% Similarity=0.068 Sum_probs=77.9
Q ss_pred eEEEecc-eEEEEEcCCcc-chHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeC--C
Q 012790 44 KVEFHPL-GVVGAIVSWNY-PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG--F 119 (456)
Q Consensus 44 ~~~~~P~-GVv~vi~p~N~-P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g--~ 119 (456)
..+.-|. |.|+++..-+- +-...+..-...+.+|..++- |.-|+..|.+ ..|++-..++=++- +
T Consensus 20 ~~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa~~L~e-------~~Gl~v~~v~k~~eGG~ 87 (178)
T 1vmd_A 20 YKIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTGALLQE-------KLGLKVHRLKSGPLGGD 87 (178)
T ss_dssp EEEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHHHHHHH-------HHCCCCEECSCGGGTHH
T ss_pred eeeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHHHHHHH-------HhCceeEEEeecCCCCC
Confidence 3445555 76666655443 555555555667777988775 4455544332 17998776653332 2
Q ss_pred hHhHHHHHh-ccCEEEecCC-------HHHHHHHHHHhhccCCcccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCC
Q 012790 120 AETGEALVS-SVDKIIFVGS-------PGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 190 (456)
Q Consensus 120 ~~~~~~L~~-~vd~i~fTGS-------~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~G 190 (456)
...++.+.+ .+|.|+||=+ ..-+..|.+.|..+-.|+.--+ ..|+.++.+.+++..
T Consensus 88 pqI~d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 88 QQIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred chHHHHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 245666666 9999999876 2356889999998888877544 566777788777664
No 59
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=44.54 E-value=16 Score=30.75 Aligned_cols=58 Identities=19% Similarity=0.179 Sum_probs=42.2
Q ss_pred HHHcCCCCCcEEEEe-C-C----hHhHHHHHh-ccCEEEecCCH-----HHHHHHHHHhhccCCcccccC
Q 012790 103 LAAVGAPENLVDVIT-G-F----AETGEALVS-SVDKIIFVGSP-----GVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 103 l~~aGlp~g~v~vv~-g-~----~~~~~~L~~-~vd~i~fTGS~-----~~g~~v~~~aa~~~~pv~lEl 160 (456)
|.+.|+|-..++-++ | + +...+.+.+ .+|.|++|-+. .-+..|.+.|.++..|+.-.+
T Consensus 63 L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 63 LNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 346899988777665 3 3 345566666 99999998665 367888899988888887654
No 60
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=36.58 E-value=10 Score=31.81 Aligned_cols=55 Identities=13% Similarity=0.123 Sum_probs=39.0
Q ss_pred cCCCCCcEEEEe-CC-hHhHHHHHh-ccCEEEecCC-------HHHHHHHHHHhhccCCcccccC
Q 012790 106 VGAPENLVDVIT-GF-AETGEALVS-SVDKIIFVGS-------PGVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 106 aGlp~g~v~vv~-g~-~~~~~~L~~-~vd~i~fTGS-------~~~g~~v~~~aa~~~~pv~lEl 160 (456)
.|++-..++=++ |+ ...++.+.+ .+|.|+||=+ ..-+..|.+.|..+-.|+.--+
T Consensus 48 ~Gl~v~~v~k~~~eG~p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l 112 (134)
T 2xw6_A 48 TGLTVEKLLSGPLGGDQQMGARVAEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATNP 112 (134)
T ss_dssp HCCCCEECSCGGGTHHHHHHHHHHTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECSH
T ss_pred hCceEEEEEecCCCCcchHHHHHHCCCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcCH
Confidence 799887776555 43 355666666 9999999977 2345778888888777776433
No 61
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=36.21 E-value=94 Score=26.09 Aligned_cols=64 Identities=11% Similarity=0.133 Sum_probs=42.1
Q ss_pred cccCHHHHHHHHHHHHHHHh-cCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHH
Q 012790 234 ALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV 312 (456)
Q Consensus 234 pli~~~~~~~v~~~i~~a~~-~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai 312 (456)
.+.+++.+++..+....+++ -|++++..|. .+.++.+... |.+ .-+.|+.|.|.+.|.
T Consensus 44 ~vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~-------------~~~~lEG~~~-------e~~-~~~viieFPS~~aa~ 102 (143)
T 3hhl_A 44 ETTGAEAYAAYGRDSGPVSERLGGXVVWQGQ-------------FELMLIGPQD-------EHW-DHVFIAEYPSVAAFV 102 (143)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHTTCEEEEEEE-------------EEEEEESCTT-------CCC-SEEEEEEESCHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHHcCCEEEeecC-------------CceeEECCCC-------CCC-CeEEEEECCCHHHHH
Confidence 35666777777766665553 4888887665 2444544211 222 467899999999999
Q ss_pred HHHhcC
Q 012790 313 KLANDS 318 (456)
Q Consensus 313 ~~~n~~ 318 (456)
++.|+-
T Consensus 103 a~y~Sp 108 (143)
T 3hhl_A 103 EMIRDP 108 (143)
T ss_dssp HHHHCH
T ss_pred HHHcCH
Confidence 997753
No 62
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=35.90 E-value=98 Score=25.20 Aligned_cols=74 Identities=8% Similarity=0.030 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccc-----cceeeecCCCCCccchhccccCceeEeeeCCHHHHHH
Q 012790 239 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-----PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVK 313 (456)
Q Consensus 239 ~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~-----~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~ 313 (456)
...+...++.++..+.|. ++.|+. +.. ...+..+ .|+|..+.-.+ ..|..| =+.|+.++|.|||++
T Consensus 30 ~~~~~~~~~~~~l~~~G~-lv~g~~-L~~--~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lg-G~~iie~~s~deA~e 100 (124)
T 1s7i_A 30 AIVDECMTYSDQLGKAGH-YIASHA-LQS--VQTATTLRHQGGRLAMTDGPFAE----TKEQLG-GFYLIEARDLNQALQ 100 (124)
T ss_dssp HHHHHHHHHHHHHHHHTC-EEEEEE-CCC--GGGCEEEEECSSCEEEEESCSSC----CSSEEE-EEEEEEESSHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCE-EEecCc-CCC--CcceEEEEecCCceeEecCCCcC----Ccccce-eEEEEEeCCHHHHHH
Confidence 345566667777666664 444332 110 0112111 23443332222 345665 356789999999999
Q ss_pred HHhcCCCC
Q 012790 314 LANDSRYG 321 (456)
Q Consensus 314 ~~n~~~~g 321 (456)
++...++.
T Consensus 101 ~A~~~P~~ 108 (124)
T 1s7i_A 101 IAAKIPPG 108 (124)
T ss_dssp HHTTCGGG
T ss_pred HHHhCCcc
Confidence 99987764
No 63
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.74 E-value=27 Score=30.53 Aligned_cols=49 Identities=14% Similarity=0.173 Sum_probs=40.3
Q ss_pred hccccCceeEeeeCCHHHHHHHH----hcCCCCceeEEecCCHHHHHHHHHhc
Q 012790 293 EEAFGPIMPIMKFNTDEEVVKLA----NDSRYGLGCAVFSGSQHRAREIAAQI 341 (456)
Q Consensus 293 eE~FGPvl~v~~~~~~~eai~~~----n~~~~gL~~~vft~d~~~~~~~~~~l 341 (456)
||-||+..|..--.+++||++.+ .....-|..|+++......+.+.+++
T Consensus 25 ~~~yg~~~p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~ 77 (178)
T 2ec4_A 25 SSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQM 77 (178)
T ss_dssp HHHHCSCCCCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHT
T ss_pred HHHhCCCCCCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHh
Confidence 57788888777667999999999 77788899999998766667777655
No 64
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=30.63 E-value=2.3e+02 Score=24.12 Aligned_cols=84 Identities=20% Similarity=0.202 Sum_probs=49.6
Q ss_pred HHHHHHHHHcCCCCCc--EEEEeCChH---hHHHHHh--ccCEEE-----ecCCHHHHHHHHHHhhccCCcccccCCCcc
Q 012790 97 RIIQAALAAVGAPENL--VDVITGFAE---TGEALVS--SVDKII-----FVGSPGVGRMIMRNASKTLTPVTLELGGKD 164 (456)
Q Consensus 97 ~l~~~~l~~aGlp~g~--v~vv~g~~~---~~~~L~~--~vd~i~-----fTGS~~~g~~v~~~aa~~~~pv~lElgGk~ 164 (456)
+-..+.|.+.|..+.- +--|||.=| ..+.|.+ ++|.|. ..|++.--..|...+++.+..+.|+.+=.=
T Consensus 32 ~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIalG~VIrG~T~Hfd~Va~~vs~gl~~v~l~~~vPV 111 (154)
T 1hqk_A 32 EGAIDCIVRHGGREEDITLVRVPGSWEIPVAAGELARKEDIDAVIAIGVLIRGATPHFDYIASEVSKGLANLSLELRKPI 111 (154)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHTCTTCCEEEEEEEEECCSSTHHHHHHHHHHHHHHHHHHHHTSCE
T ss_pred HHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEeeeeecCCchHHHHHHHHHHHHHHHHHhhcCCCE
Confidence 3334456678877652 334677533 3456665 788876 457777777777777766666666664211
Q ss_pred e-EEEcCCCCHHHHHHHH
Q 012790 165 A-FIVCDDVDVPHVAQIA 181 (456)
Q Consensus 165 p-~iV~~daDl~~aa~~i 181 (456)
- .|+..+ +.+.|.++.
T Consensus 112 ~~GVLT~~-~~eQA~~Ra 128 (154)
T 1hqk_A 112 TFGVITAD-TLEQAIERA 128 (154)
T ss_dssp EEEEEEES-SHHHHHHHE
T ss_pred EEEEeCCC-CHHHHHHHh
Confidence 1 223343 788877655
No 65
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=26.94 E-value=82 Score=25.45 Aligned_cols=80 Identities=13% Similarity=0.134 Sum_probs=47.2
Q ss_pred HHHHHHhhCCCCCccc--CCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccc-------cCHHHHHHHHHHHHH
Q 012790 180 IAVRAALQSSGQNCAG--AERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL-------CLLEHSEKLQNLVND 250 (456)
Q Consensus 180 ~i~~~~~~n~GQ~C~a--~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl-------i~~~~~~~v~~~i~~ 250 (456)
..+.......+-.|.. ....+++.+.++++.+.+.+.++.+.--.|..++..-..+ .++.. +..+++.
T Consensus 36 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~~~---~~~ll~~ 112 (135)
T 2v9v_A 36 KLLQSMAAAGQVTLLRVENDLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPARV---YQALLEE 112 (135)
T ss_dssp HHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCHHH---HHHHHHH
T ss_pred HHHHHHHhCCcEEEEecCCCeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCHHH---HHHHHHH
Confidence 4444444445545554 2344899999999999999999886545555444332222 23333 3455666
Q ss_pred HHhcCCeEeecC
Q 012790 251 ALDKGAEILARG 262 (456)
Q Consensus 251 a~~~Ga~v~~gG 262 (456)
..++|.-...|+
T Consensus 113 l~~~g~l~~~~~ 124 (135)
T 2v9v_A 113 WSREGRLQLAAN 124 (135)
T ss_dssp HHHTTSEEECSS
T ss_pred HHHCCCEEecCC
Confidence 667775444444
No 66
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=26.39 E-value=2.8e+02 Score=26.02 Aligned_cols=91 Identities=11% Similarity=0.020 Sum_probs=62.8
Q ss_pred HHHHHhcCCeEEEecCCCCh-hH-HHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh-ccCEEEecCCHH-----
Q 012790 70 MLAAVFSGNGIVIKVSENAS-WS-GCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS-SVDKIIFVGSPG----- 140 (456)
Q Consensus 70 ~~~ALaaGN~VvlKps~~~p-~~-~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~-~vd~i~fTGS~~----- 140 (456)
+-.|=..+.+||+--|+.+. +. ...++.++..+.+++++|- ++++=+|.. +....-++ .+..|+|-||..
T Consensus 35 l~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~VPV-alHlDHg~~~e~i~~ai~~GFtSVMiDgS~lp~eeN 113 (286)
T 1gvf_A 35 LEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPL-ALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAEN 113 (286)
T ss_dssp HHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTTSCB-EEEEEEECCHHHHHHHHHTTCCEEEECCTTSCHHHH
T ss_pred HHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCCCcE-EEEcCCCCCHHHHHHHHHcCCCeEEECCCCCCHHHH
Confidence 34456678899999888653 22 2446677777777788773 456556644 54444555 999999999974
Q ss_pred --HHHHHHHHhhccCCcccccCC
Q 012790 141 --VGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 141 --~g~~v~~~aa~~~~pv~lElg 161 (456)
.-+.+.+.|.+....|=.|||
T Consensus 114 i~~Tk~vv~~ah~~gvsVEaElG 136 (286)
T 1gvf_A 114 VKLVKSVVDFCHSQDCSVEAELG 136 (286)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHHHHcCCEEEEEEe
Confidence 446667777776777888887
No 67
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=25.69 E-value=2.5e+02 Score=23.88 Aligned_cols=84 Identities=20% Similarity=0.192 Sum_probs=48.7
Q ss_pred HHHHHHHHHcCCCCCc--EEEEeCChH---hHHHHHh--ccCEEE-----ecCCHHHHHHHHHHhhccCCcccccCCCcc
Q 012790 97 RIIQAALAAVGAPENL--VDVITGFAE---TGEALVS--SVDKII-----FVGSPGVGRMIMRNASKTLTPVTLELGGKD 164 (456)
Q Consensus 97 ~l~~~~l~~aGlp~g~--v~vv~g~~~---~~~~L~~--~vd~i~-----fTGS~~~g~~v~~~aa~~~~pv~lElgGk~ 164 (456)
+-..+.|.+.|..+.- +--|||.=| ..+.|.+ ++|.|. ..|++.--..|...+++.+..+.|+.+=.=
T Consensus 32 ~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~V~~~vs~Gl~~v~l~~~vPV 111 (154)
T 1rvv_A 32 SGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPV 111 (154)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHHTSCCSEEEEEEEEECCSSSHHHHHHHHHHHHHHHHHHHHCSCE
T ss_pred HHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEeeeeecCCchHHHHHHHHHHHHHHHHHhhhCCCE
Confidence 3334456677877552 334667533 3455654 788776 457777777777777766666666664211
Q ss_pred e-EEEcCCCCHHHHHHHH
Q 012790 165 A-FIVCDDVDVPHVAQIA 181 (456)
Q Consensus 165 p-~iV~~daDl~~aa~~i 181 (456)
- .|+..+ +.+.|.++.
T Consensus 112 ~~GVLT~~-~~eQA~~Ra 128 (154)
T 1rvv_A 112 IFGIVTTE-NIEQAIERA 128 (154)
T ss_dssp EEEEEEES-SHHHHHHTE
T ss_pred EEEecCCC-CHHHHHHHh
Confidence 1 223333 687776654
No 68
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=23.61 E-value=3.4e+02 Score=23.06 Aligned_cols=85 Identities=24% Similarity=0.270 Sum_probs=49.2
Q ss_pred HHHHHHHHHcC-CCCCcEEE--EeCChH---hHHHHHh--ccCEEE-----ecCCHHHHHHHHHHhhccCCcccccCCCc
Q 012790 97 RIIQAALAAVG-APENLVDV--ITGFAE---TGEALVS--SVDKII-----FVGSPGVGRMIMRNASKTLTPVTLELGGK 163 (456)
Q Consensus 97 ~l~~~~l~~aG-lp~g~v~v--v~g~~~---~~~~L~~--~vd~i~-----fTGS~~~g~~v~~~aa~~~~pv~lElgGk 163 (456)
+-..+.|.+.| .++.-+.+ |||.=| ..+.|.+ ++|.|. ..|+|.--+.|...+.+.+..+.|+.+=.
T Consensus 32 ~gA~~~l~~~G~v~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~Va~~v~~Gl~~v~L~~~vP 111 (156)
T 3nq4_A 32 DGAVDALTRIGQVKDDNITVVWVPGAYELPLATEALAKSGKYDAVVALGTVIRGGTAHFEYVAGGASNGLASVAQDSGVP 111 (156)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEEESSTTTHHHHHHHHHHHCSCSEEEEEEEEECCSSTHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHcCCCcccceEEEEcCcHHHHHHHHHHHHhcCCCCEEEEeeeeecCCchHHHHHHHHHHHHHHHHHhccCCC
Confidence 33444566777 75544433 566422 3455554 688776 45777777777777777666666666422
Q ss_pred ceEEEcCCCCHHHHHHHH
Q 012790 164 DAFIVCDDVDVPHVAQIA 181 (456)
Q Consensus 164 ~p~iV~~daDl~~aa~~i 181 (456)
=-.-|+-.-+.+.|.++.
T Consensus 112 V~~GVLT~~~~eQA~~Ra 129 (156)
T 3nq4_A 112 VAFGVLTTESIEQAIERA 129 (156)
T ss_dssp EEEEEEEESCHHHHHHHB
T ss_pred EEEEEeCCCCHHHHHHHh
Confidence 112233334788877764
No 69
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=23.41 E-value=52 Score=30.07 Aligned_cols=66 Identities=14% Similarity=0.120 Sum_probs=42.2
Q ss_pred hHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh-ccCEEEecCCHHH
Q 012790 66 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGV 141 (456)
Q Consensus 66 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~i~fTGS~~~ 141 (456)
.+..++..+..||-||++.++..-. ..+..++... +|.+++++++.+.+ ..-. ..+.+.++.+...
T Consensus 20 ~F~~l~~~vl~GnQiIVrg~~~~~~--~s~~~~L~~l-----LP~~c~~l~~~s~~---Y~~~~~cnilgls~~v~i 86 (226)
T 3v42_A 20 SFRMLAWHVLMGNQVIWKSRDVDLV--QSAFEVLRTM-----LPVGCVRIIPYSSQ---YEEAYRCNFLGLSPHVQI 86 (226)
T ss_dssp HHHHHHHHHHHTCEEEEECSCHHHH--HHHHHHHGGG-----SCGGGCCEEEEESS---CCCTTTCSEEEECTTCCC
T ss_pred HHHHHHHHHhcCCEEEEEcCCHHHH--HHHHHHHHHh-----CCHHHHhccccchh---hcchhheeeecCCCCccc
Confidence 3456777889999999997764322 2234444443 89999999876432 1112 6666776666443
No 70
>1c2y_A Protein (lumazine synthase); riboflavin biosynthesis, transferase; HET: LMZ; 3.30A {Spinacia oleracea} SCOP: c.16.1.1
Probab=22.78 E-value=3.5e+02 Score=22.95 Aligned_cols=84 Identities=18% Similarity=0.125 Sum_probs=48.0
Q ss_pred HHHHHHHHHcCCCCC-cEEEEeCChH---hHHHHHh--ccCEEEe-----cCCHHHHHHHHHHhhccCCcccccCCCcce
Q 012790 97 RIIQAALAAVGAPEN-LVDVITGFAE---TGEALVS--SVDKIIF-----VGSPGVGRMIMRNASKTLTPVTLELGGKDA 165 (456)
Q Consensus 97 ~l~~~~l~~aGlp~g-~v~vv~g~~~---~~~~L~~--~vd~i~f-----TGS~~~g~~v~~~aa~~~~pv~lElgGk~p 165 (456)
+-..+.|.+.|...+ .+--|||.=| ..+.|.+ ++|.|.- .|++.--..|...+.+.+..+.|+.+=.=-
T Consensus 33 ~ga~~~l~~~Gv~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~Va~~v~~gl~~v~L~~~vPV~ 112 (156)
T 1c2y_A 33 EGALDTFKKYSVNEDIDVVWVPGAYELGVTAQALGKSGKYHAIVCLGAVVKGDTSHYDAVVNSASSGVLSAGLNSGVPCV 112 (156)
T ss_dssp HHHHHHHHHTTCCSCCEEEEESSHHHHHHHHHHHHHTTCCSEEEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHTSCEE
T ss_pred HHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHHHhcCCCCEEEEecccccCCchHHHHHHHHHHHHHHHHHhhcCCCEE
Confidence 333445667777522 1233667433 3455554 7888774 467766677777777666666666642212
Q ss_pred -EEEcCCCCHHHHHHHH
Q 012790 166 -FIVCDDVDVPHVAQIA 181 (456)
Q Consensus 166 -~iV~~daDl~~aa~~i 181 (456)
.|+..+ +.+.|.++.
T Consensus 113 ~GVLT~~-~~eQA~~Ra 128 (156)
T 1c2y_A 113 FGVLTCD-NMDQAINRA 128 (156)
T ss_dssp EEEECCS-SHHHHHHHE
T ss_pred EEEeCCC-CHHHHHHHc
Confidence 233344 788777654
No 71
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=20.32 E-value=2e+02 Score=21.30 Aligned_cols=37 Identities=27% Similarity=0.404 Sum_probs=26.2
Q ss_pred cCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh
Q 012790 76 SGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120 (456)
Q Consensus 76 aGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~ 120 (456)
++|-+|+|..|-+ +..++.++. +..+|. ++-.+-|+.
T Consensus 20 ~~n~vVikT~PG~---A~~vA~~iD----~~~~~e-IlGTIAGDD 56 (79)
T 2zfz_A 20 SGNLAVLRTPPGA---AHYLASAID----RAALPQ-VVGTIAGDD 56 (79)
T ss_dssp ETTEEEEECSTTC---HHHHHHHHH----HHCCTT-EEEEEECSS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHH----hCCCCC-eEEEEecCC
Confidence 7999999988776 445555554 455554 888888853
Done!