AmiGO: BLAST Results


BLAST match view associations BLAST with emb1138 emb1138 emb1138 AT5G26742	protein from Arabidopsis thaliana	2.4e-153
BLAST match view associations BLAST with PMH2 PMH2 PMH2 putative mitochondrial RNA helicase 2	protein from Arabidopsis thaliana	1.2e-51
BLAST match view associations BLAST with PMH1 PMH1 PMH1 putative mitochondrial RNA helicase 1	protein from Arabidopsis thaliana	3.6e-50
BLAST match view associations BLAST with ddx21 ddx21 ddx21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	gene_product from Danio rerio	9.4e-50
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Canis lupus familiaris	8.5e-49
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Bos taurus	1.2e-48
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Canis lupus familiaris	1.2e-48
BLAST match view associations BLAST with Ddx50 Ddx50 Ddx50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	protein from Mus musculus	2.5e-48
BLAST match view associations BLAST with DDX50 DDX50 DDX50 ATP-dependent RNA helicase DDX50	protein from Homo sapiens	2.7e-48
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Gallus gallus	2.6e-47
BLAST match view associations BLAST with Ddx50 Ddx50 Ddx50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	gene from Rattus norvegicus	4.2e-47
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Sus scrofa	8.6e-47
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Canis lupus familiaris	2.5e-46
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Canis lupus familiaris	2.5e-46
BLAST match view associations BLAST with Ddx21 Ddx21 Ddx21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	protein from Mus musculus	3.8e-46
BLAST match view associations BLAST with DDX21 DDX21 DDX21 DDX21 protein	protein from Bos taurus	4.1e-46
BLAST match view associations BLAST with Ddx21 Ddx21 Ddx21 DEAD (Asp-Glu-Ala-Asp) box helicase 21	gene from Rattus norvegicus	6.6e-46
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Nucleolar RNA helicase 2	protein from Homo sapiens	1.1e-45
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Sus scrofa	1.0e-44
BLAST match view associations BLAST with PRH75 PRH75 PRH75	protein from Arabidopsis thaliana	3.6e-44
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Gallus gallus	1.6e-38
BLAST match view associations BLAST with PFE0215w PFE0215w PFE0215w ATP-dependent helicase, putative	gene from Plasmodium falciparum	2.9e-34
BLAST match view associations BLAST with PFE0215w PFE0215w PFE0215w ATP-dependent helicase, putative	protein from Plasmodium falciparum 3D7	2.9e-34
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Gallus gallus	2.9e-32
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Geobacillus kaustophilus HTA426	6.0e-32
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 10987	1.7e-30
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis str. Al Hakam	5.1e-30
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus E33L	5.1e-30
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis serovar konkukian str. 97-27	5.1e-30
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus anthracis	5.1e-30
BLAST match view associations BLAST with BA_0247 BA_0247 BA_0247 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	5.1e-30
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 14579	5.5e-30
BLAST match view associations BLAST with deaD deaD deaD Cold-shock DEAD box protein A	protein from Pseudomonas protegens Pf-5	6.3e-30
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	1.9e-28
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	1.9e-28
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus subtilis subsp. subtilis str. 168	2.1e-28
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus licheniformis DSM 13 = ATCC 14580	7.2e-28
BLAST match view associations BLAST with SO_4034 SO_4034 SO_4034 ATP-dependent RNA helicase DeaD	protein from Shewanella oneidensis MR-1	8.1e-27
BLAST match view associations BLAST with PFL0100c PFL0100c PFL0100c ATP dependent RNA helicase, putative	gene from Plasmodium falciparum	4.5e-26
BLAST match view associations BLAST with PFL0100c PFL0100c PFL0100c ATP-dependent RNA Helicase, putative	protein from Plasmodium falciparum 3D7	4.5e-26
BLAST match view associations BLAST with DED1 DED1 DED1 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase	gene from Saccharomyces cerevisiae	7.1e-26
BLAST match view associations BLAST with orf19.7392 orf19.7392 orf19.7392	gene_product from Candida albicans	1.6e-25
BLAST match view associations BLAST with SPO_1443 SPO_1443 SPO_1443 ATP-dependent RNA helicase RhlE	protein from Ruegeria pomeroyi DSS-3	1.9e-25
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor str. N16961	3.2e-25
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor	3.2e-25
BLAST match view associations BLAST with CPS_1590 CPS_1590 CPS_1590 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	3.3e-25
BLAST match view associations BLAST with DBP1 DBP1 DBP1 Putative ATP-dependent RNA helicase of the DEAD-box protein family	gene from Saccharomyces cerevisiae	5.6e-25
BLAST match view associations BLAST with RRP3 RRP3 RRP3 Protein involved in rRNA processing	gene from Saccharomyces cerevisiae	5.7e-25
BLAST match view associations BLAST with AT5G14610 AT5G14610 AT5G14610	protein from Arabidopsis thaliana	1.0e-24
BLAST match view associations BLAST with DRH1 DRH1 DRH1 DEAD box RNA helicase 1	protein from Arabidopsis thaliana	1.5e-24
BLAST match view associations BLAST with deaD deaD deaD DeaD, DEAD-box RNA helicase	protein from Escherichia coli K-12	4.3e-24
BLAST match view associations BLAST with deaD deaD deaD Cold-shock DEAD box protein A homolog	protein from Mycobacterium tuberculosis	5.2e-24
BLAST match view associations BLAST with RH36 RH36 RH36 RNA helicase 36	protein from Arabidopsis thaliana	6.7e-24
BLAST match view associations BLAST with SO_1383 SO_1383 SO_1383 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	7.3e-24
BLAST match view associations BLAST with AT3G58510 AT3G58510 AT3G58510	protein from Arabidopsis thaliana	8.5e-24
BLAST match view associations BLAST with CPS_1726 CPS_1726 CPS_1726 RNA helicase DeaD	protein from Colwellia psychrerythraea 34H	1.4e-23
BLAST match view associations BLAST with Bt.75622 Bt.75622 Bt.75622 Uncharacterized protein	protein from Bos taurus	1.7e-23
BLAST match view associations BLAST with orf19.7546 orf19.7546 orf19.7546	gene_product from Candida albicans	3.4e-23
BLAST match view associations BLAST with dbpA dbpA dbpA	gene from Escherichia coli K-12	3.8e-23
BLAST match view associations BLAST with PSPPH_0449 PSPPH_0449 PSPPH_0449 ATP-dependent RNA helicase RhlE, putative	protein from Pseudomonas syringae pv. phaseolicola 1448A	4.0e-23
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase RhlE	protein from Hyphomonas neptunium ATCC 15444	4.1e-23
BLAST match view associations BLAST with laf-1 laf-1 laf-1	gene from Caenorhabditis elegans	4.2e-23
BLAST match view associations BLAST with GSU_0914 GSU_0914 GSU_0914 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	4.4e-23
BLAST match view associations BLAST with BAS5307 BAS5307 BAS5307 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis	4.8e-23
BLAST match view associations BLAST with BA_5703 BA_5703 BA_5703 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	4.8e-23
BLAST match view associations BLAST with AT2G42520 AT2G42520 AT2G42520	protein from Arabidopsis thaliana	6.8e-23
BLAST match view associations BLAST with AT3G06480 AT3G06480 AT3G06480	protein from Arabidopsis thaliana	7.0e-23
BLAST match view associations BLAST with rhlE_2 rhlE_2 rhlE_2 Putative ATP-dependent RNA helicase	protein from Pseudomonas protegens Pf-5	1.1e-22
BLAST match view associations BLAST with Rm62 Rm62 Rm62	protein from Drosophila melanogaster	1.2e-22
BLAST match view associations BLAST with AT5G63120 AT5G63120 AT5G63120	protein from Arabidopsis thaliana	1.2e-22
BLAST match view associations BLAST with vbh-1 vbh-1 vbh-1	gene from Caenorhabditis elegans	1.2e-22
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Sus scrofa	1.2e-22
BLAST match view associations BLAST with I3LHW0 I3LHW0 I3LHW0 Uncharacterized protein	protein from Sus scrofa	1.4e-22
BLAST match view associations BLAST with LOC100524536 LOC100524536 LOC100524536 Uncharacterized protein	protein from Sus scrofa	1.4e-22
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Bos taurus	2.0e-22
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Canis lupus familiaris	2.1e-22
BLAST match view associations BLAST with DDX3X DDX3X DDX3X ATP-dependent RNA helicase DDX3X	protein from Homo sapiens	2.1e-22
BLAST match view associations BLAST with CPS_0042 CPS_0042 CPS_0042 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	4.2e-22
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Coxiella burnetii RSA 493	4.2e-22
BLAST match view associations BLAST with CBU_0670 CBU_0670 CBU_0670 ATP-dependent RNA helicase RhlE, putative	protein from Coxiella burnetii RSA 493	4.2e-22
BLAST match view associations BLAST with CPS_0042 CPS_0042 CPS_0042 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	4.2e-22
BLAST match view associations BLAST with TIF1 TIF1 TIF1 ATP-dependent RNA helicase eIF4A	protein from Magnaporthe oryzae 70-15	1.0e-21
BLAST match view associations BLAST with Ddx3y Ddx3y Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	protein from Mus musculus	1.3e-21
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	protein from Mus musculus	1.4e-21
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	gene from Rattus norvegicus	1.4e-21
BLAST match view associations BLAST with SO_3388 SO_3388 SO_3388 ATP-dependent RNA helicase DEAD box family	protein from Shewanella oneidensis MR-1	1.4e-21
BLAST match view associations BLAST with SO_3388 SO_3388 SO_3388 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	1.4e-21
BLAST match view associations BLAST with pl10 pl10 pl10	gene_product from Danio rerio	1.5e-21
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Sus scrofa	1.9e-21
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Gallus gallus	2.0e-21
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Gallus gallus	2.0e-21
BLAST match view associations BLAST with GSU_0491 GSU_0491 GSU_0491 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	2.5e-21
BLAST match view associations BLAST with PFL1310c PFL1310c PFL1310c ATP-dependent RNA helicase, putative	gene from Plasmodium falciparum	4.2e-21
BLAST match view associations BLAST with AT3G58570 AT3G58570 AT3G58570	protein from Arabidopsis thaliana	5.4e-21
BLAST match view associations BLAST with Ddx3y Ddx3y Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked	gene from Rattus norvegicus	5.5e-21
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  012794
        (456 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504955106 - symbol:emb1138 "embryo defective 1...  1425  2.4e-153  2
TAIR|locus:2087852 - symbol:PMH2 "putative mitochondrial ...   536  1.2e-51   1
TAIR|locus:2087832 - symbol:PMH1 "putative mitochondrial ...   522  3.6e-50   1
ZFIN|ZDB-GENE-031113-10 - symbol:ddx21 "DEAD (Asp-Glu-Ala...   520  9.4e-50   1
UNIPROTKB|E2RPT4 - symbol:DDX50 "Uncharacterized protein"...   509  8.5e-49   1
UNIPROTKB|F1MMK3 - symbol:DDX50 "Uncharacterized protein"...   509  1.2e-48   1
UNIPROTKB|E2QTT0 - symbol:DDX50 "Uncharacterized protein"...   509  1.2e-48   1
MGI|MGI:2182303 - symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) bo...   506  2.5e-48   1
UNIPROTKB|Q9BQ39 - symbol:DDX50 "ATP-dependent RNA helica...   506  2.7e-48   1
UNIPROTKB|E1BW15 - symbol:DDX50 "Uncharacterized protein"...   495  2.6e-47   1
RGD|1310934 - symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) box po...   493  4.2e-47   1
UNIPROTKB|F1SUG8 - symbol:DDX50 "Uncharacterized protein"...   493  8.6e-47   1
UNIPROTKB|E2QTL6 - symbol:DDX21 "Uncharacterized protein"...   491  2.5e-46   1
UNIPROTKB|F6V8G4 - symbol:DDX21 "Uncharacterized protein"...   491  2.5e-46   1
MGI|MGI:1860494 - symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) bo...   491  3.8e-46   1
UNIPROTKB|A4FV23 - symbol:DDX21 "DDX21 protein" species:9...   489  4.1e-46   1
RGD|1307306 - symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box he...   487  6.6e-46   1
UNIPROTKB|F1LX16 - symbol:F1LX16 "Uncharacterized protein...   480  1.0e-45   1
UNIPROTKB|Q9NR30 - symbol:DDX21 "Nucleolar RNA helicase 2...   485  1.1e-45   1
UNIPROTKB|F1SUG7 - symbol:DDX21 "Uncharacterized protein"...   478  1.0e-44   1
TAIR|locus:2167903 - symbol:PRH75 species:3702 "Arabidops...   466  3.6e-44   1
UNIPROTKB|E1C6M6 - symbol:DDX21 "Uncharacterized protein"...   412  1.6e-38   1
GENEDB_PFALCIPARUM|PFE0215w - symbol:PFE0215w "ATP-depend...   380  2.9e-34   1
UNIPROTKB|Q8I457 - symbol:PFE0215w "ATP-dependent helicas...   380  2.9e-34   1
UNIPROTKB|F1NJ30 - symbol:DDX21 "Uncharacterized protein"...   353  2.9e-32   1
UNIPROTKB|Q5L3G9 - symbol:cshA "DEAD-box ATP-dependent RN...   350  6.0e-32   1
UNIPROTKB|Q73EU1 - symbol:cshA "DEAD-box ATP-dependent RN...   339  1.7e-30   1
UNIPROTKB|A0R8U6 - symbol:cshA "DEAD-box ATP-dependent RN...   335  5.1e-30   1
UNIPROTKB|Q63GX5 - symbol:cshA "DEAD-box ATP-dependent RN...   335  5.1e-30   1
UNIPROTKB|Q6HPE6 - symbol:cshA "DEAD-box ATP-dependent RN...   335  5.1e-30   1
UNIPROTKB|Q81VG0 - symbol:cshA "DEAD-box ATP-dependent RN...   335  5.1e-30   1
TIGR_CMR|BA_0247 - symbol:BA_0247 "ATP-dependent RNA heli...   335  5.1e-30   1
UNIPROTKB|Q81IT9 - symbol:cshA "DEAD-box ATP-dependent RN...   335  5.5e-30   1
UNIPROTKB|Q4K8U0 - symbol:deaD "Cold-shock DEAD box prote...   308  6.3e-30   2
UNIPROTKB|Q3AFI3 - symbol:CHY_0229 "ATP-dependent RNA hel...   317  1.9e-28   1
TIGR_CMR|CHY_0229 - symbol:CHY_0229 "ATP-dependent RNA he...   317  1.9e-28   1
UNIPROTKB|P96614 - symbol:cshA "DEAD-box ATP-dependent RN...   319  2.1e-28   1
UNIPROTKB|Q65N62 - symbol:cshA "DEAD-box ATP-dependent RN...   314  7.2e-28   1
ASPGD|ASPL0000077157 - symbol:AN10557 species:162425 "Eme...   311  6.0e-27   1
TIGR_CMR|SO_4034 - symbol:SO_4034 "ATP-dependent RNA heli...   309  8.1e-27   1
GENEDB_PFALCIPARUM|PFL0100c - symbol:PFL0100c "ATP depend...   305  4.5e-26   1
UNIPROTKB|Q8I625 - symbol:PFL0100c "ATP-dependent RNA Hel...   305  4.5e-26   1
SGD|S000005730 - symbol:DED1 "ATP-dependent DEAD (Asp-Glu...   300  7.1e-26   1
CGD|CAL0004832 - symbol:orf19.7392 species:5476 "Candida ...   298  1.6e-25   1
TIGR_CMR|SPO_1443 - symbol:SPO_1443 "ATP-dependent RNA he...   292  1.9e-25   1
UNIPROTKB|Q9KLE2 - symbol:VC_A0804 "ATP-dependent RNA hel...   295  3.2e-25   1
TIGR_CMR|VC_A0804 - symbol:VC_A0804 "ATP-dependent RNA he...   295  3.2e-25   1
TIGR_CMR|CPS_1590 - symbol:CPS_1590 "ATP-dependent RNA he...   289  3.3e-25   1
SGD|S000006040 - symbol:DBP1 "Putative ATP-dependent RNA ...   292  5.6e-25   1
SGD|S000001107 - symbol:RRP3 "Protein involved in rRNA pr...   289  5.7e-25   1
POMBASE|SPCC1795.11 - symbol:sum3 "translation initiation...   291  7.8e-25   1
TAIR|locus:2222617 - symbol:AT5G14610 species:3702 "Arabi...   291  1.0e-24   1
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1...   288  1.5e-24   1
UNIPROTKB|P0A9P6 - symbol:deaD "DeaD, DEAD-box RNA helica...   284  4.3e-24   1
UNIPROTKB|Q11039 - symbol:deaD "Cold-shock DEAD box prote...   282  5.2e-24   1
TAIR|locus:2032910 - symbol:RH36 "RNA helicase 36" specie...   279  6.7e-24   1
TIGR_CMR|SO_1383 - symbol:SO_1383 "ATP-dependent RNA heli...   276  7.3e-24   1
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi...   281  8.5e-24   1
TIGR_CMR|CPS_1726 - symbol:CPS_1726 "RNA helicase DeaD" s...   279  1.4e-23   1
UNIPROTKB|G3N2S5 - symbol:Bt.75622 "Uncharacterized prote...   277  1.7e-23   1
CGD|CAL0000056 - symbol:orf19.7546 species:5476 "Candida ...   274  3.4e-23   1
UNIPROTKB|P21693 - symbol:dbpA species:83333 "Escherichia...   271  3.8e-23   1
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer...   274  3.9e-23   1
UNIPROTKB|Q48PB7 - symbol:PSPPH_0449 "ATP-dependent RNA h...   275  4.0e-23   1
UNIPROTKB|Q0C354 - symbol:rhlE "ATP-dependent RNA helicas...   271  4.1e-23   1
WB|WBGene00002244 - symbol:laf-1 species:6239 "Caenorhabd...   276  4.2e-23   1
TIGR_CMR|GSU_0914 - symbol:GSU_0914 "ATP-dependent RNA he...   270  4.4e-23   1
UNIPROTKB|Q81JK1 - symbol:BAS5307 "ATP-dependent RNA heli...   271  4.8e-23   1
TIGR_CMR|BA_5703 - symbol:BA_5703 "ATP-dependent RNA heli...   271  4.8e-23   1
TAIR|locus:2041549 - symbol:AT2G42520 species:3702 "Arabi...   273  6.8e-23   1
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi...   277  7.0e-23   1
UNIPROTKB|Q4K4H4 - symbol:rhlE_2 "Putative ATP-dependent ...   271  1.1e-22   1
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph...   272  1.2e-22   1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi...   270  1.2e-22   1
WB|WBGene00006888 - symbol:vbh-1 species:6239 "Caenorhabd...   271  1.2e-22   1
UNIPROTKB|F1RX16 - symbol:DDX3X "Uncharacterized protein"...   271  1.2e-22   1
UNIPROTKB|I3LHW0 - symbol:I3LHW0 "Uncharacterized protein...   270  1.4e-22   1
UNIPROTKB|F1SQ03 - symbol:LOC100524536 "Uncharacterized p...   270  1.4e-22   1
UNIPROTKB|G5E631 - symbol:DDX3X "Uncharacterized protein"...   269  2.0e-22   1
UNIPROTKB|J9P0V9 - symbol:DDX3X "Uncharacterized protein"...   269  2.1e-22   1
UNIPROTKB|O00571 - symbol:DDX3X "ATP-dependent RNA helica...   269  2.1e-22   1
UNIPROTKB|Q48AV0 - symbol:CPS_0042 "ATP-dependent RNA hel...   266  4.2e-22   1
UNIPROTKB|Q83DM8 - symbol:rhlE "ATP-dependent RNA helicas...   266  4.2e-22   1
TIGR_CMR|CBU_0670 - symbol:CBU_0670 "ATP-dependent RNA he...   266  4.2e-22   1
TIGR_CMR|CPS_0042 - symbol:CPS_0042 "ATP-dependent RNA he...   266  4.2e-22   1
UNIPROTKB|A4QVP2 - symbol:TIF1 "ATP-dependent RNA helicas...   263  1.0e-21   1
MGI|MGI:1349406 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) bo...   267  1.3e-21   1
MGI|MGI:103064 - symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/Hi...   267  1.4e-21   1
RGD|1564771 - symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box po...   267  1.4e-21   1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli...   266  1.4e-21   1
UNIPROTKB|Q8EBV7 - symbol:SO_3388 "ATP-dependent RNA heli...   263  1.4e-21   1
TIGR_CMR|SO_3388 - symbol:SO_3388 "ATP-dependent RNA heli...   263  1.4e-21   1
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795...   267  1.5e-21   1
UNIPROTKB|I3LRT7 - symbol:DDX4 "Probable ATP-dependent RN...   251  1.9e-21   1
UNIPROTKB|F1NIX2 - symbol:DDX3X "Uncharacterized protein"...   266  2.0e-21   1
UNIPROTKB|F1NIX1 - symbol:DDX3X "Uncharacterized protein"...   266  2.0e-21   1
TIGR_CMR|GSU_0491 - symbol:GSU_0491 "ATP-dependent RNA he...   263  2.5e-21   1
GENEDB_PFALCIPARUM|PFL1310c - symbol:PFL1310c "ATP-depend...   265  4.2e-21   1
TAIR|locus:2076436 - symbol:AT3G58570 species:3702 "Arabi...   264  5.4e-21   1
RGD|2314437 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box po...   264  5.5e-21   1

WARNING:  Descriptions of 796 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:504955106 [details] [associations]
            symbol:emb1138 "embryo defective 1138" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
            dormancy" evidence=NAS] [GO:0009570 "chloroplast stroma"
            evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
            "chloroplast envelope" evidence=IDA] InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0009570 GO:GO:0016020 GO:GO:0046872 GO:GO:0008270
            GO:GO:0009941 GO:GO:0003723 EMBL:AF058914 Gene3D:4.10.60.10
            SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268805 UniGene:At.23875 EMBL:AJ010457 EMBL:AC137518
            EMBL:AY080625 EMBL:AY091068 EMBL:AY094485 EMBL:AY123000
            EMBL:AY128278 EMBL:BT000713 EMBL:BT002289 EMBL:BT002456
            EMBL:AY102126 EMBL:BT004533 EMBL:AK229821 IPI:IPI00523172
            IPI:IPI00656967 PIR:T01202 PIR:T51738 RefSeq:NP_001031943.1
            RefSeq:NP_680225.2 UniGene:At.66764 ProteinModelPortal:Q8L7S8
            SMR:Q8L7S8 STRING:Q8L7S8 PaxDb:Q8L7S8 PRIDE:Q8L7S8
            EnsemblPlants:AT5G26742.2 GeneID:832713 KEGG:ath:AT5G26742
            GeneFarm:1570 TAIR:At5g26742 InParanoid:Q8L7S8 OMA:ISHEQGW
            PhylomeDB:Q8L7S8 ProtClustDB:CLSN2680279 Genevestigator:Q8L7S8
            Uniprot:Q8L7S8
        Length = 748

 Score = 1425 (506.7 bits), Expect = 2.4e-153, Sum P(2) = 2.4e-153
 Identities = 276/328 (84%), Positives = 307/328 (93%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTS 73
             VG+QDEKLAEGIKLYAI+TT+TSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLAL++
Sbjct:   314 VGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSN 373

Query:    74 IIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 133
              IA+EALHGDISQHQRERTLN FRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPET
Sbjct:   374 SIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPET 433

Query:   134 FVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVV 193
             FVHRSGRTGRAGKEG+AILM TSSQ+RTVRSLERDVGC FEF+SPP V D+LESSA+QVV
Sbjct:   434 FVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVV 493

Query:   194 ATLNGVHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQ 253
             ATLNGVHP+S++FF+ TAQ+L EEKGTDALAAALA LSGFS+PPSSRSL++HE+GWVTLQ
Sbjct:   494 ATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALAHLSGFSQPPSSRSLLSHEKGWVTLQ 553

Query:   254 LTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLN 313
             L RD   +RGF+SARSV GFLSD+Y TAADE+GKI +IADDR+QGAVFDLPEEIAKELL 
Sbjct:   554 LIRDPTNARGFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLE 613

Query:   314 KQIPPGNTISKITKLPALQDDGPSSDNY 341
             K +P GN++S ITKLP LQDDGPSSDNY
Sbjct:   614 KDVPEGNSLSMITKLPPLQDDGPSSDNY 641

 Score = 92 (37.4 bits), Expect = 2.4e-153, Sum P(2) = 2.4e-153
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query:   417 DDWLIXXXXXXXXXX-XXXXXXXXACFNCGKSGHRASECPN 456
             DDWLI                   +CF CGKSGHRA++CP+
Sbjct:   704 DDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATDCPD 744


>TAIR|locus:2087852 [details] [associations]
            symbol:PMH2 "putative mitochondrial RNA helicase 2"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
            "cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
            evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
            [GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
            GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
            GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
            UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
            PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
            KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
            HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
            ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
            Uniprot:Q9LUW5
        Length = 616

 Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
 Identities = 105/169 (62%), Positives = 130/169 (76%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTS 73
             VG+ D+KLA+GI  Y+I   +  + +I+  L+T +AKGGK IVFTQTKRDAD +S AL  
Sbjct:   312 VGDSDQKLADGITTYSIIADSYGRASIIGPLVTEHAKGGKCIVFTQTKRDADRLSYALAR 371

Query:    74 IIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 133
                 EALHGDISQ QRERTL GFR G F +LVATDVAARGLD+PNVDLIIHYELPN+ ET
Sbjct:   372 SFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTET 431

Query:   134 FVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 182
             FVHR+GRTGRAGK+G+AIL+++  Q R V+ +ER+VG +F  +    VE
Sbjct:   432 FVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIEREVGSRFTELPSIAVE 480


>TAIR|locus:2087832 [details] [associations]
            symbol:PMH1 "putative mitochondrial RNA helicase 1"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
            cold" evidence=IEP] [GO:0009414 "response to water deprivation"
            evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
            [GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
            GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
            EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
            UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
            STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
            GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
            InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
            Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
        Length = 610

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 104/185 (56%), Positives = 133/185 (71%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTS 73
             VG+ D+KLA+GI +Y+I+  +  + +I+  L+  + KGGK IVFTQTKRDAD ++  L  
Sbjct:   324 VGDSDQKLADGITMYSIAADSYGRASIIGPLVKEHGKGGKCIVFTQTKRDADRLAFGLAK 383

Query:    74 IIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 133
                 EALHGDISQ QRERTL GFR G F++LVATDVAARGLD+PNVDL+IHYELPN+ ET
Sbjct:   384 SYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVPNVDLVIHYELPNNTET 443

Query:   134 FVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVV 193
             FVHR+GRTGRAGK+G+AIL+    Q R V+ +E++VG +F  +    VE    S  E V 
Sbjct:   444 FVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSRFNELPSIAVERGSASMFEGVG 503

Query:   194 ATLNG 198
             A   G
Sbjct:   504 ARSGG 508


>ZFIN|ZDB-GENE-031113-10 [details] [associations]
            symbol:ddx21 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            21" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012562 InterPro:IPR017956 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS51194 SMART:SM00384 SMART:SM00490
            ZFIN:ZDB-GENE-031113-10 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 CTD:9188 HOVERGEN:HBG051331
            OrthoDB:EOG46143T EMBL:BC160629 IPI:IPI00611974
            RefSeq:NP_001120807.1 UniGene:Dr.104447 ProteinModelPortal:B1H1J4
            STRING:B1H1J4 GeneID:799650 KEGG:dre:799650 NextBio:20933916
            Uniprot:B1H1J4
        Length = 759

 Score = 520 (188.1 bits), Expect = 9.4e-50, P = 9.4e-50
 Identities = 131/336 (38%), Positives = 194/336 (57%)

Query:     8 FSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADE 66
             F H   +G + +K A  ++  AI+   + + +++ D+I VY+   G+TIVF +TK++A E
Sbjct:   374 FIHVDLIGKKTQKAATTVEHLAIACHWSQRASVIGDVIQVYSGSHGRTIVFCETKKEATE 433

Query:    67 VSLALTSIIAS-EALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
             +SL  TSI  S ++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL+I  
Sbjct:   434 LSLN-TSIKQSAQSLHGDIPQKQREVTLKGFRNGSFEVLVATNVAARGLDIPEVDLVIQS 492

Query:   126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
               PND E+++HRSGRTGRAG+ G  I  +   +   ++ +E+  G  F+ V  P   D++
Sbjct:   493 SPPNDVESYIHRSGRTGRAGRTGICICFYQRKEESQLKFVEQKAGITFKRVGVPTAYDII 552

Query:   186 ESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLIN 244
             +SS++  V  L+ V   +V +F   AQ LI+++G  +ALAAALA +SG +     RSLIN
Sbjct:   553 QSSSKDAVRFLDSVPAVAVGYFREAAQELIQQRGAVEALAAALAHISG-ATSLEQRSLIN 611

Query:   245 HEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLP 304
              E G+ ++ L+          + R +   L +        I   H++     +G  FD+P
Sbjct:   612 SEPGFSSMILSCSQEMHSISFAWRGLKEQLGEEID---QHIS--HMVFIKGKKGVCFDVP 666

Query:   305 EEIAKELLNK-QIPPGNTISKITKLPALQDD-GPSS 338
                 KE+  K Q     T+S  T+LP L+    P+S
Sbjct:   667 VSKLKEVQEKWQDSRRWTLSTATQLPELEQSLRPNS 702


>UNIPROTKB|E2RPT4 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00680000100003
            EMBL:AAEX03002786 Ensembl:ENSCAFT00000038045 Uniprot:E2RPT4
        Length = 687

 Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
 Identities = 124/331 (37%), Positives = 190/331 (57%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALT 72
             VG   +K A  ++  AI    + +  ++ D++ VY+   G+ I+F +TK++  E+++   
Sbjct:   353 VGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPH 412

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
                 ++ LHGDI+Q QRE TL GFR+G F VLVAT+VAARGLDIP VDL+I    P D E
Sbjct:   413 IKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVE 472

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
             +++HRSGRTGRAG+ G  I  +   +R  +R +E+  G  F+ V  P   D+++S +   
Sbjct:   473 SYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDA 532

Query:   193 VATLNGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
             + +L  V   +V+FF P+AQRLIEEKG  DALAAALA +SG S     RSLI  ++G+VT
Sbjct:   533 IRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF-EPRSLITSDKGFVT 591

Query:   252 LQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKEL 311
             + L           + + +   LS     A  +I ++ ++  +   G  FD+P   ++ L
Sbjct:   592 MTLESPEEIQDVSCAWKELNRKLSS---NAVSQITRMCLLKGN--MGVCFDVPTTESERL 646

Query:   312 LNKQIPPGNTISKITKLPALQD--DGPSSDN 340
               +       +S   KLP +++  DG +S N
Sbjct:   647 QAEWHDSDWILSLPAKLPEIEEYYDGNTSSN 677


>UNIPROTKB|F1MMK3 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00680000100003 CTD:79009 KO:K13183
            OMA:GDTEEGC EMBL:DAAA02061828 IPI:IPI00689334 RefSeq:NP_001192982.1
            UniGene:Bt.55841 PRIDE:F1MMK3 Ensembl:ENSBTAT00000022002
            GeneID:534331 KEGG:bta:534331 NextBio:20876363 ArrayExpress:F1MMK3
            Uniprot:F1MMK3
        Length = 737

 Score = 509 (184.2 bits), Expect = 1.2e-48, P = 1.2e-48
 Identities = 124/331 (37%), Positives = 190/331 (57%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALT 72
             VG   +K A  ++  AI    + +  ++ D++ VY+   G+ I+F +TK++  E+++   
Sbjct:   351 VGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPH 410

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
                 ++ LHGDI+Q QRE TL GFR+G F VLVAT+VAARGLDIP VDL+I    P D E
Sbjct:   411 IKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVE 470

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
             +++HRSGRTGRAG+ G  I  +   +R  +R +E+  G  F+ V  P   D+++S +   
Sbjct:   471 SYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDA 530

Query:   193 VATLNGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
             + +L  V   +V+FF P+AQRLIEEKG  DALAAALA +SG S     RSLI  ++G+VT
Sbjct:   531 IRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF-EPRSLITSDKGFVT 589

Query:   252 LQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKEL 311
             + L           + + +   LS     A  +I ++ ++  +   G  FD+P   ++ L
Sbjct:   590 MTLESPEEIQDVSCAWKELNRKLSS---NAVSQITRMCLLKGN--MGVCFDVPTTESERL 644

Query:   312 LNKQIPPGNTISKITKLPALQD--DGPSSDN 340
               +       +S   KLP +++  DG +S N
Sbjct:   645 QAEWHDSDWILSVPAKLPEIEEYYDGNTSSN 675


>UNIPROTKB|E2QTT0 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 OMA:GDTEEGC EMBL:AAEX03002786
            Ensembl:ENSCAFT00000021867 NextBio:20898308 Uniprot:E2QTT0
        Length = 738

 Score = 509 (184.2 bits), Expect = 1.2e-48, P = 1.2e-48
 Identities = 124/331 (37%), Positives = 190/331 (57%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALT 72
             VG   +K A  ++  AI    + +  ++ D++ VY+   G+ I+F +TK++  E+++   
Sbjct:   352 VGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPH 411

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
                 ++ LHGDI+Q QRE TL GFR+G F VLVAT+VAARGLDIP VDL+I    P D E
Sbjct:   412 IKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVE 471

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
             +++HRSGRTGRAG+ G  I  +   +R  +R +E+  G  F+ V  P   D+++S +   
Sbjct:   472 SYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDA 531

Query:   193 VATLNGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
             + +L  V   +V+FF P+AQRLIEEKG  DALAAALA +SG S     RSLI  ++G+VT
Sbjct:   532 IRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF-EPRSLITSDKGFVT 590

Query:   252 LQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKEL 311
             + L           + + +   LS     A  +I ++ ++  +   G  FD+P   ++ L
Sbjct:   591 MTLESPEEIQDVSCAWKELNRKLSS---NAVSQITRMCLLKGN--MGVCFDVPTTESERL 645

Query:   312 LNKQIPPGNTISKITKLPALQD--DGPSSDN 340
               +       +S   KLP +++  DG +S N
Sbjct:   646 QAEWHDSDWILSLPAKLPEIEEYYDGNTSSN 676


>MGI|MGI:2182303 [details] [associations]
            symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 50"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 MGI:MGI:2182303 GO:GO:0005886 GO:GO:0005524
            GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00680000100003 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OrthoDB:EOG46143T CTD:79009 KO:K13183
            OMA:GDTEEGC EMBL:AF334104 IPI:IPI00117771 RefSeq:NP_444413.1
            UniGene:Mm.114116 ProteinModelPortal:Q99MJ9 SMR:Q99MJ9
            PhosphoSite:Q99MJ9 PaxDb:Q99MJ9 PRIDE:Q99MJ9
            Ensembl:ENSMUST00000020270 GeneID:94213 KEGG:mmu:94213
            UCSC:uc007fhp.1 InParanoid:Q99MJ9 NextBio:352175 Bgee:Q99MJ9
            CleanEx:MM_DDX50 Genevestigator:Q99MJ9
            GermOnline:ENSMUSG00000020076 Uniprot:Q99MJ9
        Length = 734

 Score = 506 (183.2 bits), Expect = 2.5e-48, P = 2.5e-48
 Identities = 122/331 (36%), Positives = 189/331 (57%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALT 72
             VG   +K A  ++  AI    + +  ++ D++ VY+   G+ I+F +TK++  E+++   
Sbjct:   348 VGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPH 407

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
                 ++ LHGDI+Q QRE TL GFR+G F VLVAT+VAARGLDIP VDL+I    P D E
Sbjct:   408 IKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVE 467

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
             +++HRSGRTGRAG+ G  +  +   +R  +R +E+  G  F+ V  P   D+++S +   
Sbjct:   468 SYIHRSGRTGRAGRTGICVCFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDA 527

Query:   193 VATLNGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
             + +L  V   +V+FF P+AQRLIEEKG  DALAAALA +SG S     RSLI  ++G+VT
Sbjct:   528 IRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF-EPRSLITSDKGFVT 586

Query:   252 LQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKEL 311
             + L           + + +   LS     A   + ++ ++  +   G  FD+P   ++ L
Sbjct:   587 MTLESPEEIQDVSCAWKELNRKLSS---NAVSHVTRMCLLKGN--MGVCFDVPTSESERL 641

Query:   312 LNKQIPPGNTISKITKLPALQD--DGPSSDN 340
               +       +S   KLP +++  DG +S N
Sbjct:   642 QAEWHDSDWILSVPAKLPEIEEYYDGNTSSN 672


>UNIPROTKB|Q9BQ39 [details] [associations]
            symbol:DDX50 "ATP-dependent RNA helicase DDX50"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005730
            EMBL:CH471083 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 EMBL:AL359844 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OrthoDB:EOG46143T EMBL:AF334103 EMBL:BC000210
            EMBL:BC000272 EMBL:BC018637 IPI:IPI00031554 RefSeq:NP_076950.1
            UniGene:Hs.522984 PDB:2E29 PDBsum:2E29 ProteinModelPortal:Q9BQ39
            SMR:Q9BQ39 IntAct:Q9BQ39 STRING:Q9BQ39 PhosphoSite:Q9BQ39
            DMDM:55976580 SWISS-2DPAGE:Q9BQ39 PaxDb:Q9BQ39 PeptideAtlas:Q9BQ39
            PRIDE:Q9BQ39 DNASU:79009 Ensembl:ENST00000373585 GeneID:79009
            KEGG:hsa:79009 UCSC:uc001jou.3 CTD:79009 GeneCards:GC10P070661
            HGNC:HGNC:17906 HPA:HPA037388 MIM:610373 neXtProt:NX_Q9BQ39
            PharmGKB:PA134948525 InParanoid:Q9BQ39 KO:K13183 OMA:GDTEEGC
            PhylomeDB:Q9BQ39 ChiTaRS:DDX50 EvolutionaryTrace:Q9BQ39
            GenomeRNAi:79009 NextBio:67657 ArrayExpress:Q9BQ39 Bgee:Q9BQ39
            CleanEx:HS_DDX50 Genevestigator:Q9BQ39 Uniprot:Q9BQ39
        Length = 737

 Score = 506 (183.2 bits), Expect = 2.7e-48, P = 2.7e-48
 Identities = 124/331 (37%), Positives = 190/331 (57%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALT 72
             VG   +K A  ++  AI    + +  ++ D++ VY+   G+ I+F +TK++  E+++   
Sbjct:   351 VGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPH 410

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
                 ++ LHGDI+Q QRE TL GFR+G F VLVAT+VAARGLDIP VDL+I    P D E
Sbjct:   411 IKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVE 470

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
             +++HRSGRTGRAG+ G  I  +   +R  +R +E+  G  F+ V  P   D+++S +   
Sbjct:   471 SYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDA 530

Query:   193 VATLNGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
             + +L  V   +V+FF P+AQRLIEEKG  DALAAALA +SG S     RSLI  ++G+VT
Sbjct:   531 IRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF-EPRSLITSDKGFVT 589

Query:   252 LQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKEL 311
             + L           + + +   LS     A  +I ++ ++  +   G  FD+P   ++ L
Sbjct:   590 MTLESLEEIQDVSCAWKELNRKLSS---NAVSQITRMCLLKGN--MGVCFDVPTTESERL 644

Query:   312 LNKQIPPGNTISKITKLPALQD--DGPSSDN 340
               +       +S   KLP +++  DG +S N
Sbjct:   645 QAEWHDSDWILSVPAKLPEIEEYYDGNTSSN 675


>UNIPROTKB|E1BW15 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
            "double-stranded RNA binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0009615 "response to virus" evidence=IEA]
            [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003725
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0043330 GeneTree:ENSGT00680000100003 OMA:EILCVAY
            EMBL:AADN02028009 IPI:IPI00582179 Ensembl:ENSGALT00000006591
            Uniprot:E1BW15
        Length = 693

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 105/243 (43%), Positives = 156/243 (64%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALT 72
             +G + +K A  ++  AI    + +  ++ D+I VY+   G+TIVF +TK+DA+E++L  +
Sbjct:   327 IGRKTQKAATTVEHLAIECHWSQRAAVIGDVIQVYSGSYGRTIVFCETKKDANELALNAS 386

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
                  ++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL++    P D E
Sbjct:   387 IKQDCQSLHGDIPQKQREITLKGFRNGAFKVLVATNVAARGLDIPEVDLVVQSSPPKDVE 446

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
             +++HRSGRTGRAG+ G  I  +   +   +R +E   G  F+ V  P   D++++S++  
Sbjct:   447 SYIHRSGRTGRAGRTGICICFYQRKEENQLRYVEVKAGITFKRVGVPTATDIIKASSKDA 506

Query:   193 VATLNGVHPESVEFFTPTAQRLIEEKG-TDALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
             +  L+ V   ++E+F  +AQ LIEEKG  +ALAAALA +SG +     RSL+N + G+VT
Sbjct:   507 IRCLDSVPQTAIEYFKESAQLLIEEKGPVNALAAALAHISG-ATSIEQRSLLNSDVGFVT 565

Query:   252 LQL 254
             + L
Sbjct:   566 MVL 568


>RGD|1310934 [details] [associations]
            symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 50"
            species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005886
            "plasma membrane" evidence=ISO] InterPro:IPR001650
            InterPro:IPR012562 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 RGD:1310934 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
            GO:GO:0004386 eggNOG:COG0513 EMBL:BC091427 IPI:IPI00764536
            UniGene:Rn.98470 SMR:Q5BJM0 Ensembl:ENSRNOT00000057582
            UCSC:RGD:1310934 HOGENOM:HOG000137600 NextBio:677841
            Genevestigator:Q5BJM0 Uniprot:Q5BJM0
        Length = 380

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 120/321 (37%), Positives = 186/321 (57%)

Query:    25 IKLY-AISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALTSIIASEALHG 82
             I L+ AI    + +  ++ D++ VY+   G+ I+F +TK++  E+++       ++ LHG
Sbjct:     4 INLHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHG 63

Query:    83 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 142
             DI+Q QRE TL GFR+G F VLVAT+VAARGLDIP VDL+I    P D E+++HRSGRTG
Sbjct:    64 DIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTG 123

Query:   143 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPE 202
             RAG+ G  +  +   +R  +R +E+  G  F+ V  P   D+++S +   + +L  V   
Sbjct:   124 RAGRTGICVCFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYA 183

Query:   203 SVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFS 261
             +V+FF P+AQRLIEEKG  DALAAALA +SG S     RSLI  ++G+VT+ L       
Sbjct:   184 AVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF-EPRSLITSDKGFVTMTLESPEEIQ 242

Query:   262 RGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNT 321
                 + + +   LS     A  ++ ++ ++  +   G  FD+P   ++ L  +       
Sbjct:   243 DVSCAWKELNRKLSS---NAVSQVTRMCLLKGN--MGVCFDVPTSESERLQAEWHDSDWI 297

Query:   322 ISKITKLPALQD--DGPSSDN 340
             +S   KLP +++  DG +S N
Sbjct:   298 LSVPAKLPEIEEYYDGNTSSN 318


>UNIPROTKB|F1SUG8 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00680000100003 OMA:GDTEEGC
            EMBL:CU468175 Ensembl:ENSSSCT00000011216 Uniprot:F1SUG8
        Length = 737

 Score = 493 (178.6 bits), Expect = 8.6e-47, P = 8.6e-47
 Identities = 121/331 (36%), Positives = 188/331 (56%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALT 72
             VG   +K A  ++  AI    + +  ++ D++ VY+   G+ I+F +TK++  E+++   
Sbjct:   351 VGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPH 410

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
                 ++ LHGDI+Q QRE TL GFR+G F VLVAT+VAARGLDIP VDL+I    P D E
Sbjct:   411 IKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVE 470

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
             +++HRSGRTGRAG+ G  I  +   +R  +R +E+  G  F+ V  P   D+++S +   
Sbjct:   471 SYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDA 530

Query:   193 VATLNGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
             + +L  V   +V+FF P+AQRLIEEKG  DALAAALA +SG S     RSLI  ++G+VT
Sbjct:   531 IRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF-EPRSLITSDKGFVT 589

Query:   252 LQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKEL 311
             + L           + + +   LS        +I ++ ++  +   G  FD+    ++ L
Sbjct:   590 MTLESPEEIQDVSCAWKELNKKLSS---NVLSQITRMCLLKGN--MGVCFDVSTAESERL 644

Query:   312 LNKQIPPGNTISKITKLPALQD--DGPSSDN 340
               +       +S   KLP +++  DG ++ N
Sbjct:   645 QAEWHDSDWILSVPAKLPEIEEHYDGNTASN 675


>UNIPROTKB|E2QTL6 [details] [associations]
            symbol:DDX21 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043330 "response to exogenous dsRNA"
            evidence=IEA] [GO:0009615 "response to virus" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0003725 "double-stranded
            RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0009615
            GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GO:GO:0043330 InterPro:IPR014014 PROSITE:PS51195
            CTD:9188 RefSeq:XP_851746.2 ProteinModelPortal:E2QTL6
            Ensembl:ENSCAFT00000021901 GeneID:476891 KEGG:cfa:476891
            NextBio:20852481 Uniprot:E2QTL6
        Length = 785

 Score = 491 (177.9 bits), Expect = 2.5e-46, P = 2.5e-46
 Identities = 103/243 (42%), Positives = 157/243 (64%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAK-GGKTIVFTQTKRDADEVSLALT 72
             +G + +K A  ++  AI    T +  ++ D+I VY+   G+TI+F +TK++A E+S  ++
Sbjct:   402 IGKKTQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGFHGRTIIFCETKKEAQELSQNVS 461

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
                 +++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL+I    P D E
Sbjct:   462 IRQDAQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAARGLDIPEVDLVIQSSPPKDVE 521

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
             +++HRSGRTGRAG+ G  I  +   +   +  +E+  G KF+ +  P   +++++S++  
Sbjct:   522 SYIHRSGRTGRAGRTGICICFYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDA 581

Query:   193 VATLNGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
             +  L+ V P ++  F  +A++LIEEKG  +ALAAALA +SG +     RSLIN + G+VT
Sbjct:   582 IRLLDSVPPTAISHFKQSAEKLIEEKGAVEALAAALAHISG-ATSVDQRSLINSDAGFVT 640

Query:   252 LQL 254
             + L
Sbjct:   641 MIL 643


>UNIPROTKB|F6V8G4 [details] [associations]
            symbol:DDX21 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 OMA:QCEPPRE EMBL:AAEX03002786
            Ensembl:ENSCAFT00000021901 Uniprot:F6V8G4
        Length = 786

 Score = 491 (177.9 bits), Expect = 2.5e-46, P = 2.5e-46
 Identities = 103/243 (42%), Positives = 157/243 (64%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAK-GGKTIVFTQTKRDADEVSLALT 72
             +G + +K A  ++  AI    T +  ++ D+I VY+   G+TI+F +TK++A E+S  ++
Sbjct:   402 IGKKTQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGFHGRTIIFCETKKEAQELSQNVS 461

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
                 +++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL+I    P D E
Sbjct:   462 IRQDAQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAARGLDIPEVDLVIQSSPPKDVE 521

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
             +++HRSGRTGRAG+ G  I  +   +   +  +E+  G KF+ +  P   +++++S++  
Sbjct:   522 SYIHRSGRTGRAGRTGICICFYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDA 581

Query:   193 VATLNGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
             +  L+ V P ++  F  +A++LIEEKG  +ALAAALA +SG +     RSLIN + G+VT
Sbjct:   582 IRLLDSVPPTAISHFKQSAEKLIEEKGAVEALAAALAHISG-ATSVDQRSLINSDAGFVT 640

Query:   252 LQL 254
             + L
Sbjct:   641 MIL 643


>MGI|MGI:1860494 [details] [associations]
            symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 21"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0003724 "RNA helicase
            activity" evidence=ISS] [GO:0003725 "double-stranded RNA binding"
            evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005730 "nucleolus" evidence=ISS] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0008152 "metabolic process"
            evidence=ISS] [GO:0009615 "response to virus" evidence=IMP]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0043330
            "response to exogenous dsRNA" evidence=IMP] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            MGI:MGI:1860494 GO:GO:0005524 GO:GO:0005730 EMBL:CH466553
            GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0043330 eggNOG:COG0513
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OMA:EILCVAY OrthoDB:EOG46143T EMBL:AF220365
            EMBL:AF159131 EMBL:AK160095 EMBL:BC043655 IPI:IPI00120691
            RefSeq:NP_062426.2 UniGene:Mm.413275 ProteinModelPortal:Q9JIK5
            SMR:Q9JIK5 DIP:DIP-48574N IntAct:Q9JIK5 STRING:Q9JIK5
            PhosphoSite:Q9JIK5 PaxDb:Q9JIK5 PRIDE:Q9JIK5
            Ensembl:ENSMUST00000045866 GeneID:56200 KEGG:mmu:56200
            InParanoid:Q3TVJ3 NextBio:312026 Bgee:Q9JIK5 CleanEx:MM_DDX21
            Genevestigator:Q9JIK5 GermOnline:ENSMUSG00000020075 Uniprot:Q9JIK5
        Length = 851

 Score = 491 (177.9 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 103/243 (42%), Positives = 156/243 (64%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALT 72
             +G + +K A  ++  AI    T +  ++ D+I VY+   G+TI+F +TK+DA E+S    
Sbjct:   472 IGKKTQKAAITVEHLAIKCHWTERAAVIGDVIRVYSGHQGRTIIFCETKKDAQELSQNTC 531

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
                 +++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL++    P D E
Sbjct:   532 IKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVE 591

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
             +++HRSGRTGRAG+ G  I  + + +   +  +E+  G KF+ +  P   +++++S++  
Sbjct:   592 SYIHRSGRTGRAGRTGVCICFYQNKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDA 651

Query:   193 VATLNGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
             +  L+ V P ++  F  +A++LIEEKG  +ALAAALA +SG +     RSLIN + G+VT
Sbjct:   652 IRLLDSVPPTAISHFKQSAEKLIEEKGAVEALAAALAHISG-ATSVDQRSLINSQAGFVT 710

Query:   252 LQL 254
             + L
Sbjct:   711 MIL 713


>UNIPROTKB|A4FV23 [details] [associations]
            symbol:DDX21 "DDX21 protein" species:9913 "Bos taurus"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OMA:EILCVAY OrthoDB:EOG46143T EMBL:DAAA02061828
            EMBL:BC123648 IPI:IPI00694353 RefSeq:NP_001076996.1
            UniGene:Bt.92068 Ensembl:ENSBTAT00000019351 GeneID:781917
            KEGG:bta:781917 InParanoid:A4FV23 NextBio:20925123 Uniprot:A4FV23
        Length = 784

 Score = 489 (177.2 bits), Expect = 4.1e-46, P = 4.1e-46
 Identities = 103/243 (42%), Positives = 156/243 (64%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAK-GGKTIVFTQTKRDADEVSLALT 72
             +G + +K A  ++  AI    T +  ++ D+I VY+   G+TI+F +TK++A E+S  + 
Sbjct:   401 IGKKTQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGFQGRTIIFCETKKEAQELSQNVA 460

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
                 +++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL++    P D E
Sbjct:   461 VRQDAQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAARGLDIPEVDLVVQSSPPKDVE 520

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
             +++HRSGRTGRAG+ G  I  +   +   +  +E+  G KF+ +  P   +++++S++  
Sbjct:   521 SYIHRSGRTGRAGRTGVCICFYQHKEEYQLAQVEQKAGIKFKRIGVPSPTEIIKASSKDA 580

Query:   193 VATLNGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
             +  L+ V P ++  F  +A++LIEEKG  +ALAAALA +SG +     RSLIN E G+VT
Sbjct:   581 IRLLDSVPPTAIGHFKQSAEKLIEEKGAVEALAAALAHISG-ATSVDQRSLINSEAGFVT 639

Query:   252 LQL 254
             + L
Sbjct:   640 MIL 642


>RGD|1307306 [details] [associations]
            symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box helicase 21"
            species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0003725 "double-stranded RNA binding"
            evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0009615 "response to virus" evidence=ISO] [GO:0043330 "response
            to exogenous dsRNA" evidence=ISO] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            RGD:1307306 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OrthoDB:EOG46143T EMBL:BC105878 IPI:IPI00198801
            RefSeq:NP_001032278.1 UniGene:Rn.162310 ProteinModelPortal:Q3B8Q1
            STRING:Q3B8Q1 PhosphoSite:Q3B8Q1 PRIDE:Q3B8Q1
            Ensembl:ENSRNOT00000068184 GeneID:317399 KEGG:rno:317399
            UCSC:RGD:1307306 NextBio:671745 Genevestigator:Q3B8Q1
            Uniprot:Q3B8Q1
        Length = 782

 Score = 487 (176.5 bits), Expect = 6.6e-46, P = 6.6e-46
 Identities = 103/243 (42%), Positives = 155/243 (63%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALT 72
             +G + +K A  ++  AI    T +  ++ D+I VY+   G+TI+F +TK+DA E+S    
Sbjct:   396 IGKKTQKAAITVEHLAIKCHWTERAAVIGDVIRVYSGHQGRTIIFCETKKDAQELSQNTC 455

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
                 +++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL++    P D E
Sbjct:   456 IKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVE 515

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
             +++HRSGRTGRAG+ G  I  +   +   +  +E+  G KF+ +  P   +++++S++  
Sbjct:   516 SYIHRSGRTGRAGRTGVCICFYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDA 575

Query:   193 VATLNGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
             +  L+ V P ++  F  +A++LIEEKG  +ALAAALA +SG +     RSLIN + G+VT
Sbjct:   576 IRLLDSVPPTAIGHFKQSAEKLIEEKGAVEALAAALAHISG-ATSVDQRSLINSQAGFVT 634

Query:   252 LQL 254
             + L
Sbjct:   635 MIL 637


>UNIPROTKB|F1LX16 [details] [associations]
            symbol:F1LX16 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00949361
            Ensembl:ENSRNOT00000004240 Uniprot:F1LX16
        Length = 659

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 102/243 (41%), Positives = 154/243 (63%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALT 72
             +G + +K A  ++  AI    T +  ++ D+I VY+   G+TI+F +TK+DA E+S    
Sbjct:   280 IGKKTQKAAITVEHLAIKCHWTERAAVIGDVIRVYSGHQGRTIIFCETKKDAQELSQNTC 339

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
                 +++LHGDI Q QRE TL GFR   F VLVAT+VAARGLDIP VDL++    P D E
Sbjct:   340 IKQDAQSLHGDIPQKQREITLKGFRNDNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVE 399

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
             +++HRSGRTGRAG+ G  I  +   +   +  +E+  G KF+ +  P   +++++S++  
Sbjct:   400 SYIHRSGRTGRAGRTGVCICFYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDA 459

Query:   193 VATLNGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
             +  L+ V P ++  F  +A++LIEEKG  +ALAAALA +SG +     RSLIN + G+VT
Sbjct:   460 IRLLDSVPPTAIGHFKQSAEKLIEEKGAVEALAAALAHISG-ATSVDQRSLINSQAGFVT 518

Query:   252 LQL 254
             + L
Sbjct:   519 MIL 521


>UNIPROTKB|Q9NR30 [details] [associations]
            symbol:DDX21 "Nucleolar RNA helicase 2" species:9606 "Homo
            sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
            "double-stranded RNA binding" evidence=IEA] [GO:0009615 "response
            to virus" evidence=IEA] [GO:0043330 "response to exogenous dsRNA"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005730 EMBL:CH471083 GO:GO:0009615 GO:GO:0003725
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0043330 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            EMBL:U41387 EMBL:AF261903 EMBL:AF261917 EMBL:AF261904 EMBL:AF261905
            EMBL:AF261906 EMBL:AF261907 EMBL:AF261908 EMBL:AF261909
            EMBL:AF261910 EMBL:AF261911 EMBL:AF261912 EMBL:AF261913
            EMBL:AF261914 EMBL:AF261915 EMBL:AF261916 EMBL:AK315585
            EMBL:CR749598 EMBL:AL359844 EMBL:BC008071 IPI:IPI00015953
            IPI:IPI00477179 PIR:PC6010 RefSeq:NP_001243839.1 RefSeq:NP_004719.2
            UniGene:Hs.223141 ProteinModelPortal:Q9NR30 SMR:Q9NR30
            IntAct:Q9NR30 MINT:MINT-231639 STRING:Q9NR30 PhosphoSite:Q9NR30
            DMDM:76803555 SWISS-2DPAGE:Q9NR30 PaxDb:Q9NR30 PeptideAtlas:Q9NR30
            PRIDE:Q9NR30 DNASU:9188 Ensembl:ENST00000354185 GeneID:9188
            KEGG:hsa:9188 UCSC:uc001jov.1 CTD:9188 GeneCards:GC10P070715
            H-InvDB:HIX0008880 HGNC:HGNC:2744 HPA:HPA036592 MIM:606357
            neXtProt:NX_Q9NR30 PharmGKB:PA27210 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 InParanoid:Q9NR30 OMA:EILCVAY OrthoDB:EOG46143T
            PhylomeDB:Q9NR30 ChiTaRS:DDX21 GenomeRNAi:9188 NextBio:34453
            ArrayExpress:Q9NR30 Bgee:Q9NR30 CleanEx:HS_DDX21
            Genevestigator:Q9NR30 GermOnline:ENSG00000165732 Uniprot:Q9NR30
        Length = 783

 Score = 485 (175.8 bits), Expect = 1.1e-45, P = 1.1e-45
 Identities = 103/243 (42%), Positives = 154/243 (63%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALT 72
             +G + +K A  ++  AI    T +  ++ D+I VY+   G+TI+F +TK++A E+S    
Sbjct:   400 IGKKTQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGHQGRTIIFCETKKEAQELSQNSA 459

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
                 +++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL+I    P D E
Sbjct:   460 IKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVE 519

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
             +++HRSGRTGRAG+ G  I  +   +   +  +E+  G KF+ +  P   +++++S++  
Sbjct:   520 SYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVPSATEIIKASSKDA 579

Query:   193 VATLNGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
             +  L+ V P ++  F  +A++LIEEKG  +ALAAALA +SG +     RSLIN   G+VT
Sbjct:   580 IRLLDSVPPTAISHFKQSAEKLIEEKGAVEALAAALAHISG-ATSVDQRSLINSNVGFVT 638

Query:   252 LQL 254
             + L
Sbjct:   639 MIL 641


>UNIPROTKB|F1SUG7 [details] [associations]
            symbol:DDX21 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
            [GO:0009615 "response to virus" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0003725 "double-stranded RNA binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005730 GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0043330
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00680000100003
            OMA:EILCVAY EMBL:CT737244 EMBL:CU468175 Ensembl:ENSSSCT00000011217
            Uniprot:F1SUG7
        Length = 855

 Score = 478 (173.3 bits), Expect = 1.0e-44, P = 1.0e-44
 Identities = 122/330 (36%), Positives = 186/330 (56%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAK-GGKTIVFTQTKRDADEVSLALT 72
             +G + +K A  ++  AI    T +  ++ D+I VY+   G+TI+F +TK++A E+S    
Sbjct:   472 IGKKTQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGYQGRTIIFCETKKEAQELSQNAA 531

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
                 +++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL++    P D E
Sbjct:   532 VRQDAQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAARGLDIPEVDLVVQSCPPKDVE 591

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
             +++HRSGRTGRAG+ G  I  +   +   +  +E+  G KF+ +  P   +++++S++  
Sbjct:   592 SYIHRSGRTGRAGRTGICICFYQHKEEYQLTLVEQKAGIKFKRIGVPSPTEIIKASSKDA 651

Query:   193 VATLNGVHPESVEFFTPTAQRLIEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
             +  L+ V P ++  F  +A++LIEEKG  +ALAAALA +SG +     RSLIN + G+VT
Sbjct:   652 IRLLDSVPPTAIGHFKQSAEKLIEEKGAVEALAAALAHISG-ATSVDQRSLINSDAGFVT 710

Query:   252 LQLTRDSA----FSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEI 307
             + L R S      S  +   +  +G   D+     D   K  +    + QG  FD+P   
Sbjct:   711 MIL-RCSIEMPNISYAWKELKEQLG--EDI-----DSKVKGMVFLKGK-QGVCFDIPTAA 761

Query:   308 AKELLNKQIPPGN-TISKITKLPALQDDGP 336
               E+  K        +S  T+ P L+  GP
Sbjct:   762 VTEVQEKWHDSRRWQLSVATEQPELE--GP 789


>TAIR|locus:2167903 [details] [associations]
            symbol:PRH75 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM;IEA;IDA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0001510 "RNA methylation" evidence=RCA] [GO:0051604 "protein
            maturation" evidence=RCA] [GO:0016070 "RNA metabolic process"
            evidence=TAS] [GO:0017151 "DEAD/H-box RNA helicase binding"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730
            GO:GO:0003723 GO:GO:0016070 GO:GO:0017151 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AB019235 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268805 EMBL:X99938 EMBL:AY039576 EMBL:AY056137
            EMBL:BT008581 IPI:IPI00520493 RefSeq:NP_201025.1 UniGene:At.22598
            ProteinModelPortal:Q39189 SMR:Q39189 IntAct:Q39189 STRING:Q39189
            PaxDb:Q39189 PRIDE:Q39189 EnsemblPlants:AT5G62190.1 GeneID:836340
            KEGG:ath:AT5G62190 GeneFarm:918 TAIR:At5g62190 InParanoid:Q39189
            OMA:QCEPPRE PhylomeDB:Q39189 ProtClustDB:CLSN2687322
            Genevestigator:Q39189 GermOnline:AT5G62190 Uniprot:Q39189
        Length = 671

 Score = 466 (169.1 bits), Expect = 3.6e-44, P = 3.6e-44
 Identities = 121/329 (36%), Positives = 177/329 (53%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTS 73
             VGN   K +  ++  AI     +   ++ D+I+ Y+ GG+TI+F +TK    E+S  L  
Sbjct:   313 VGNDKMKASNSVRHIAIPCNKAAMARLIPDIISCYSSGGQTIIFAETKVQVSELSGLLDG 372

Query:    74 IIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 133
                S ALHG+I Q QRE TL GFR GKF  LVAT+VAARGLDI +V LII  E P + E 
Sbjct:   373 ---SRALHGEIPQSQREVTLAGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEA 429

Query:   134 FVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVV 193
             ++HRSGRTGRAG  G A+ ++  S++ +V  +E++ G KFE ++ P  +++  S   +  
Sbjct:   430 YIHRSGRTGRAGNTGVAVTLY-DSRKSSVSRIEKEAGIKFEHLAAPQPDEIARSGGMEAA 488

Query:   194 ATLNGVHPESVEFFTPTAQRLIEEKGTDA---LAAALAQLSGFSRPPSSRSLINHEQGWV 250
               +  V    V  F   A+ L+E  G  A   LA ALA+ +GF+     RSL+   + +V
Sbjct:   489 EKVKQVCDSVVPAFLEAAKELLETSGLSAEVLLAKALAKTAGFTEI-KKRSLLTSMENYV 547

Query:   251 TLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADE-IGKIHIIADDRVQGAVFDLPE-EIA 308
             TL L       +   S   V G L  V P    E I  + + AD    GAVFD+ + ++ 
Sbjct:   548 TLHLEA----GKPIYSPSFVYGLLRRVLPDDKVEMIEGLSLTADKT--GAVFDVKQSDLD 601

Query:   309 KELLNKQIPPGNTISKITK-LPALQDDGP 336
               +   Q   G+   ++ K +P LQ+  P
Sbjct:   602 LFIAGAQKSAGSMSLEVVKVMPKLQEREP 630


>UNIPROTKB|E1C6M6 [details] [associations]
            symbol:DDX21 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR001650
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 GO:GO:0004386
            InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00680000100003
            EMBL:AADN02028008 IPI:IPI00822651 ProteinModelPortal:E1C6M6
            Ensembl:ENSGALT00000040808 OMA:DWLENEA ArrayExpress:E1C6M6
            Uniprot:E1C6M6
        Length = 294

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 87/225 (38%), Positives = 137/225 (60%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKG-GKTIVFTQTKRDADEVSLALT 72
             +G + ++ A  ++  AI   ++ +  +L D+I VY+   G+TIVF +TK++A+E  LAL 
Sbjct:    57 IGKKTQRTATTVEHLAIQCRSSQRAEVLGDIIQVYSGSHGRTIVFCETKKEANE--LALN 114

Query:    73 SIIASEA--LHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPND 130
             S +  EA  LHGDI Q QRE TL GFR G F VL+AT+VAARGLDIP VDL+I    P D
Sbjct:   115 SALKQEAQSLHGDIPQKQREVTLKGFRNGVFEVLIATNVAARGLDIPEVDLVIQCSPPKD 174

Query:   131 PETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAE 190
              ++++HRSGRTGRAG+ G  I  +   +   ++ +E+  G  F  +  P   D++++S++
Sbjct:   175 VDSYIHRSGRTGRAGRTGICICFYQRKEEDLLKQVEQKAGITFRRIGVPSATDIIKASSD 234

Query:   191 QVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSR 235
                  L+ V P ++++F    +  +EE+  DA +    +  GF +
Sbjct:   235 DAKKCLDAVPPSAIDYFRQLPE--LEEQPQDA-SRGPPRFGGFKK 276


>GENEDB_PFALCIPARUM|PFE0215w [details] [associations]
            symbol:PFE0215w "ATP-dependent helicase,
            putative" species:5833 "Plasmodium falciparum" [GO:0020011
            "apicoplast" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006200 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GO:GO:0020011 KO:K01509 RefSeq:XP_001351602.1
            ProteinModelPortal:Q8I457 EnsemblProtists:PFE0215w:mRNA
            GeneID:812915 KEGG:pfa:PFE0215w EuPathDB:PlasmoDB:PF3D7_0504400
            HOGENOM:HOG000284069 ProtClustDB:CLSZ2431865 Uniprot:Q8I457
        Length = 755

 Score = 380 (138.8 bits), Expect = 2.9e-34, P = 2.9e-34
 Identities = 106/321 (33%), Positives = 171/321 (53%)

Query:    14 VGNQDEKLAEGIKLYAISTT--ATSKRTILSDLITVYAKGGKTIVFTQTKRDADEV-SLA 70
             V +   K A+ IK  AI T      K  +L D+I V + GG+ I+FT+TK +AD + S  
Sbjct:   393 VVDSSNKTAKNIKHIAIKTPYDIKEKALLLEDIILVKSNGGQVIIFTRTKLEADILCSEG 452

Query:    71 LTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPND 130
                 ++   LHG+I+Q  RE T+  FRQG F +L+ATD+A+RGLDI NVDL+I    PN 
Sbjct:   453 SFKSLSFAVLHGNIAQSTREYTMQRFRQGMFQILIATDIASRGLDISNVDLVIQCFPPNY 512

Query:   131 PETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAE 190
                ++HR+GRTGRA K+GT+++++++  ++ +  +E++ G KF   + P  E V   ++ 
Sbjct:   513 SAVYIHRAGRTGRANKKGTSLVLYSNEDKQDLIKIEKNCGIKFNMETLPNNEQVFHCASA 572

Query:   191 QVVATLNGVHPESVEFFTPTAQRLIEEKGT---DALAAALAQLSGFSRPP--SSRSLINH 245
                  +  V+ E + FF  TA+ LI +  +   D +      L+  ++      RSLIN 
Sbjct:   573 IASKKVENVNKEILPFFHDTAKELINKSNSLKIDQIELISRCLAIIAKKEHIKKRSLING 632

Query:   246 EQGWVTLQ-LTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLP 304
                 VTL  + ++  +S        V    +++     ++I +I I   DR   + FD+ 
Sbjct:   633 LSETVTLNFINKNRKWSSEADIVYWVNKLSNELNVNTFNKILQIKIDNKDRAS-SFFDIN 691

Query:   305 EEIAKELLNKQIPPGNTISKI 325
             E +A EL  +      T+SKI
Sbjct:   692 ENLA-ELFLQNF---KTMSKI 708


>UNIPROTKB|Q8I457 [details] [associations]
            symbol:PFE0215w "ATP-dependent helicase, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006200 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GO:GO:0020011 KO:K01509 RefSeq:XP_001351602.1
            ProteinModelPortal:Q8I457 EnsemblProtists:PFE0215w:mRNA
            GeneID:812915 KEGG:pfa:PFE0215w EuPathDB:PlasmoDB:PF3D7_0504400
            HOGENOM:HOG000284069 ProtClustDB:CLSZ2431865 Uniprot:Q8I457
        Length = 755

 Score = 380 (138.8 bits), Expect = 2.9e-34, P = 2.9e-34
 Identities = 106/321 (33%), Positives = 171/321 (53%)

Query:    14 VGNQDEKLAEGIKLYAISTT--ATSKRTILSDLITVYAKGGKTIVFTQTKRDADEV-SLA 70
             V +   K A+ IK  AI T      K  +L D+I V + GG+ I+FT+TK +AD + S  
Sbjct:   393 VVDSSNKTAKNIKHIAIKTPYDIKEKALLLEDIILVKSNGGQVIIFTRTKLEADILCSEG 452

Query:    71 LTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPND 130
                 ++   LHG+I+Q  RE T+  FRQG F +L+ATD+A+RGLDI NVDL+I    PN 
Sbjct:   453 SFKSLSFAVLHGNIAQSTREYTMQRFRQGMFQILIATDIASRGLDISNVDLVIQCFPPNY 512

Query:   131 PETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAE 190
                ++HR+GRTGRA K+GT+++++++  ++ +  +E++ G KF   + P  E V   ++ 
Sbjct:   513 SAVYIHRAGRTGRANKKGTSLVLYSNEDKQDLIKIEKNCGIKFNMETLPNNEQVFHCASA 572

Query:   191 QVVATLNGVHPESVEFFTPTAQRLIEEKGT---DALAAALAQLSGFSRPP--SSRSLINH 245
                  +  V+ E + FF  TA+ LI +  +   D +      L+  ++      RSLIN 
Sbjct:   573 IASKKVENVNKEILPFFHDTAKELINKSNSLKIDQIELISRCLAIIAKKEHIKKRSLING 632

Query:   246 EQGWVTLQ-LTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLP 304
                 VTL  + ++  +S        V    +++     ++I +I I   DR   + FD+ 
Sbjct:   633 LSETVTLNFINKNRKWSSEADIVYWVNKLSNELNVNTFNKILQIKIDNKDRAS-SFFDIN 691

Query:   305 EEIAKELLNKQIPPGNTISKI 325
             E +A EL  +      T+SKI
Sbjct:   692 ENLA-ELFLQNF---KTMSKI 708


>UNIPROTKB|F1NJ30 [details] [associations]
            symbol:DDX21 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR012562 Pfam:PF00271 Pfam:PF08152
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003723 GO:GO:0004386 GeneTree:ENSGT00680000100003
            EMBL:AADN02028008 IPI:IPI00593310 ProteinModelPortal:F1NJ30
            Ensembl:ENSGALT00000040804 ArrayExpress:F1NJ30 Uniprot:F1NJ30
        Length = 271

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 72/161 (44%), Positives = 104/161 (64%)

Query:    95 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 154
             GFR G F VL+AT+VAARGLDIP VDL+I    P D ++++HRSGRTGRAG+ G  I  +
Sbjct:     2 GFRNGVFEVLIATNVAARGLDIPEVDLVIQCSPPKDVDSYIHRSGRTGRAGRTGICICFY 61

Query:   155 TSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRL 214
                +   ++ +E+  G  F  +  P   D++++S++     L+ V P ++++F  +A+ L
Sbjct:    62 QRKEEDLLKQVEQKAGITFRRIGVPSATDIIKASSDDAKKCLDAVPPSAIDYFRQSAREL 121

Query:   215 IEEKGT-DALAAALAQLSGFSRPPSSRSLINHEQGWVTLQL 254
             IEEKG  DALAAALA +SG S     RSL+N   G+VT+ L
Sbjct:   122 IEEKGAVDALAAALAHISGASSI-QQRSLLNSTAGFVTMVL 161


>UNIPROTKB|Q5L3G9 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
            binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
            OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
            ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
            KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
            BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
        Length = 467

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 82/223 (36%), Positives = 124/223 (55%)

Query:    19 EKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IAS 77
             E     I+ Y +      K  IL+ L+ + A     IVF +TKR  DE++ AL     A+
Sbjct:   209 EMTVPNIQQYYLEVHEKKKFDILTRLLDIQAPE-LAIVFGRTKRRVDELAEALNLRGYAA 267

Query:    78 EALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHR 137
             E +HGD+SQ +R   L  F++G   +LVATDVAARGLDI  V  + ++++P DPE++VHR
Sbjct:   268 EGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAARGLDISGVTHVYNFDIPQDPESYVHR 327

Query:   138 SGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL- 196
              GRTGRAGK G A+   T  +   +  +ER    K E + PP +++ LE      +  L 
Sbjct:   328 IGRTGRAGKTGVAMTFVTPREIGQLHHIERTTKRKMERMKPPTLDEALEGQQRIAIEKLL 387

Query:   197 NGVHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 239
             N V  E++ F+   A+ L+EE  +  + AA  ++   +R P +
Sbjct:   388 NVVETENLSFYKRAAEELLEEHDSVTIVAACLKM--LTREPDT 428


>UNIPROTKB|Q73EU1 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
            binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
            OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
            RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
            DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
            GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
            Uniprot:Q73EU1
        Length = 525

 Score = 339 (124.4 bits), Expect = 1.7e-30, P = 1.7e-30
 Identities = 75/217 (34%), Positives = 125/217 (57%)

Query:    25 IKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGD 83
             I+ + +      K  +L+ L+ + +     IVF +TKR  DE+S AL     A+E +HGD
Sbjct:   215 IQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGD 273

Query:    84 ISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGR 143
             ++Q +R   L  F++G   VLVATDVAARGLDI  V  + ++++P DPE++VHR GRTGR
Sbjct:   274 LTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGR 333

Query:   144 AGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL-NGVHPE 202
             AGK+G A+L  T  +   ++++ER    K + +  P +++ LE     +   L N +  E
Sbjct:   334 AGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQNTIENE 393

Query:   203 SVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 239
             ++ ++   A+ ++EE   D++    A L   ++ P +
Sbjct:   394 NLAYYKRIAEEMLEEN--DSVTVVAAALKMMTKEPDT 428


>UNIPROTKB|A0R8U6 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
            "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
            ProteinModelPortal:A0R8U6 STRING:A0R8U6
            EnsemblBacteria:EBBACT00000069056 GeneID:4546566
            GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
            HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
            BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
        Length = 528

 Score = 335 (123.0 bits), Expect = 5.1e-30, P = 5.1e-30
 Identities = 74/217 (34%), Positives = 124/217 (57%)

Query:    25 IKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGD 83
             I+ + +      K  +L+ L+ + +     IVF +TKR  DE+S AL     A+E +HGD
Sbjct:   215 IQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGD 273

Query:    84 ISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGR 143
             ++Q +R   L  F++G   VLVATDVAARGLDI  V  + ++++P DPE++VHR GRTGR
Sbjct:   274 LTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGR 333

Query:   144 AGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHPE 202
             AGK+G A+L  T  +   ++++ER    K + +  P +++ LE     +   L   +  E
Sbjct:   334 AGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENE 393

Query:   203 SVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 239
             ++ ++   A+ ++EE   D++    A L   ++ P +
Sbjct:   394 NLAYYKRIAEEMLEEN--DSVTVVAAALKMMTKEPDT 428


>UNIPROTKB|Q63GX5 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
            "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
            ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
            ProteinModelPortal:Q63GX5 STRING:Q63GX5
            EnsemblBacteria:EBBACT00000041470 GeneID:3022962
            GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
            BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
        Length = 528

 Score = 335 (123.0 bits), Expect = 5.1e-30, P = 5.1e-30
 Identities = 74/217 (34%), Positives = 124/217 (57%)

Query:    25 IKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGD 83
             I+ + +      K  +L+ L+ + +     IVF +TKR  DE+S AL     A+E +HGD
Sbjct:   215 IQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGD 273

Query:    84 ISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGR 143
             ++Q +R   L  F++G   VLVATDVAARGLDI  V  + ++++P DPE++VHR GRTGR
Sbjct:   274 LTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGR 333

Query:   144 AGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHPE 202
             AGK+G A+L  T  +   ++++ER    K + +  P +++ LE     +   L   +  E
Sbjct:   334 AGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENE 393

Query:   203 SVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 239
             ++ ++   A+ ++EE   D++    A L   ++ P +
Sbjct:   394 NLAYYKRIAEEMLEEN--DSVTVVAAALKMMTKEPDT 428


>UNIPROTKB|Q6HPE6 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:281309 "Bacillus thuringiensis serovar konkukian str.
            97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
            "ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
            ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
            ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
            GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
            PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
        Length = 528

 Score = 335 (123.0 bits), Expect = 5.1e-30, P = 5.1e-30
 Identities = 74/217 (34%), Positives = 124/217 (57%)

Query:    25 IKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGD 83
             I+ + +      K  +L+ L+ + +     IVF +TKR  DE+S AL     A+E +HGD
Sbjct:   215 IQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGD 273

Query:    84 ISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGR 143
             ++Q +R   L  F++G   VLVATDVAARGLDI  V  + ++++P DPE++VHR GRTGR
Sbjct:   274 LTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGR 333

Query:   144 AGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHPE 202
             AGK+G A+L  T  +   ++++ER    K + +  P +++ LE     +   L   +  E
Sbjct:   334 AGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENE 393

Query:   203 SVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 239
             ++ ++   A+ ++EE   D++    A L   ++ P +
Sbjct:   394 NLAYYKRIAEEMLEEN--DSVTVVAAALKMMTKEPDT 428


>UNIPROTKB|Q81VG0 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
            RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
            HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
            EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
            EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
            GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
            BioCyc:BANT260799:GJAJ-255-MONOMER
            BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
        Length = 528

 Score = 335 (123.0 bits), Expect = 5.1e-30, P = 5.1e-30
 Identities = 74/217 (34%), Positives = 124/217 (57%)

Query:    25 IKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGD 83
             I+ + +      K  +L+ L+ + +     IVF +TKR  DE+S AL     A+E +HGD
Sbjct:   215 IQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGD 273

Query:    84 ISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGR 143
             ++Q +R   L  F++G   VLVATDVAARGLDI  V  + ++++P DPE++VHR GRTGR
Sbjct:   274 LTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGR 333

Query:   144 AGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHPE 202
             AGK+G A+L  T  +   ++++ER    K + +  P +++ LE     +   L   +  E
Sbjct:   334 AGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENE 393

Query:   203 SVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 239
             ++ ++   A+ ++EE   D++    A L   ++ P +
Sbjct:   394 NLAYYKRIAEEMLEEN--DSVTVVAAALKMMTKEPDT 428


>TIGR_CMR|BA_0247 [details] [associations]
            symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
            GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
            RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
            HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
            EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
            EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
            GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
            BioCyc:BANT260799:GJAJ-255-MONOMER
            BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
        Length = 528

 Score = 335 (123.0 bits), Expect = 5.1e-30, P = 5.1e-30
 Identities = 74/217 (34%), Positives = 124/217 (57%)

Query:    25 IKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGD 83
             I+ + +      K  +L+ L+ + +     IVF +TKR  DE+S AL     A+E +HGD
Sbjct:   215 IQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGD 273

Query:    84 ISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGR 143
             ++Q +R   L  F++G   VLVATDVAARGLDI  V  + ++++P DPE++VHR GRTGR
Sbjct:   274 LTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGR 333

Query:   144 AGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHPE 202
             AGK+G A+L  T  +   ++++ER    K + +  P +++ LE     +   L   +  E
Sbjct:   334 AGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENE 393

Query:   203 SVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 239
             ++ ++   A+ ++EE   D++    A L   ++ P +
Sbjct:   394 NLAYYKRIAEEMLEEN--DSVTVVAAALKMMTKEPDT 428


>UNIPROTKB|Q81IT9 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
            binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
            ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
            STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
            GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
            PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
        Length = 533

 Score = 335 (123.0 bits), Expect = 5.5e-30, P = 5.5e-30
 Identities = 74/217 (34%), Positives = 124/217 (57%)

Query:    25 IKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGD 83
             I+ + +      K  +L+ L+ + +     IVF +TKR  DE+S AL     A+E +HGD
Sbjct:   215 IQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGD 273

Query:    84 ISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGR 143
             ++Q +R   L  F++G   VLVATDVAARGLDI  V  + ++++P DPE++VHR GRTGR
Sbjct:   274 LTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGR 333

Query:   144 AGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHPE 202
             AGK+G A+L  T  +   ++++ER    K + +  P +++ LE     +   L   +  E
Sbjct:   334 AGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENE 393

Query:   203 SVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 239
             ++ ++   A+ ++EE   D++    A L   ++ P +
Sbjct:   394 NLAYYKRIAEEMLEEN--DSVTVVAAALKMMTKEPDT 428


>UNIPROTKB|Q4K8U0 [details] [associations]
            symbol:deaD "Cold-shock DEAD box protein A" species:220664
            "Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
            evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
            GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
            OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
            GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
            ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
            Uniprot:Q4K8U0
        Length = 557

 Score = 308 (113.5 bits), Expect = 6.3e-30, Sum P(2) = 6.3e-30
 Identities = 68/176 (38%), Positives = 112/176 (63%)

Query:    55 IVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 113
             I+F +TK+   +++ AL +    + AL+GDI+Q+QRER ++  + G+  ++VATDVAARG
Sbjct:   249 IMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVVATDVAARG 308

Query:   114 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKF 173
             LD+P +  + + ++P DPE++VHR GRTGRAG+EG A+L+ T  +RR ++ +ER  G K 
Sbjct:   309 LDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVIERVTGQKV 368

Query:   174 EFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTD--ALAAAL 227
               V  P  + VL++  +++  +L+ +  ++         RL  + G    ALAAAL
Sbjct:   369 AEVRLPDAQAVLDARIKKLTNSLSPLVADAEATHGDLLDRLTADIGCSPRALAAAL 424

 Score = 50 (22.7 bits), Expect = 6.3e-30, Sum P(2) = 6.3e-30
 Identities = 19/79 (24%), Positives = 39/79 (49%)

Query:   256 RDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQ 315
             R +  +R  ++A++++G + +    A + IG+I +    R   ++ +LPE+    LL K 
Sbjct:   484 RTALGARDGIAAKNLLGAILNEGGLAREAIGRIQV----RDSFSLVELPEDGLDRLLTK- 538

Query:   316 IPPGNTISKITKLPALQDD 334
             +       K  KL   ++D
Sbjct:   539 LKDTRVAGKQLKLRRYRED 557


>UNIPROTKB|Q3AFI3 [details] [associations]
            symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
            family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
            ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
            KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
            BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
        Length = 430

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 71/183 (38%), Positives = 115/183 (62%)

Query:    53 KTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAA 111
             + IVF +TK+  DEV   L     A++ LHGD+SQ +R +T+  F+ GK  +LVATDVAA
Sbjct:   241 QAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAA 300

Query:   112 RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVG- 170
             RGLDIP+V  +I++++P +PE+++HR GRTGRAG+EG AI +    +R+ ++++E  +  
Sbjct:   301 RGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEAINK 360

Query:   171 -CKFEFVSPPV-VEDV-LESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAAL 227
               K E +  PV +E+   +  A++++ T+    P     +   A RL+EE+ ++ L  A 
Sbjct:   361 RLKREILPEPVDLEEARFKKIAKKILDTITKGVPA---LYLEMAARLLEEEESEQLLGAT 417

Query:   228 AQL 230
               L
Sbjct:   418 LYL 420


>TIGR_CMR|CHY_0229 [details] [associations]
            symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
            family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
            ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
            KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
            BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
        Length = 430

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 71/183 (38%), Positives = 115/183 (62%)

Query:    53 KTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAA 111
             + IVF +TK+  DEV   L     A++ LHGD+SQ +R +T+  F+ GK  +LVATDVAA
Sbjct:   241 QAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAA 300

Query:   112 RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVG- 170
             RGLDIP+V  +I++++P +PE+++HR GRTGRAG+EG AI +    +R+ ++++E  +  
Sbjct:   301 RGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEAINK 360

Query:   171 -CKFEFVSPPV-VEDV-LESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAAL 227
               K E +  PV +E+   +  A++++ T+    P     +   A RL+EE+ ++ L  A 
Sbjct:   361 RLKREILPEPVDLEEARFKKIAKKILDTITKGVPA---LYLEMAARLLEEEESEQLLGAT 417

Query:   228 AQL 230
               L
Sbjct:   418 LYL 420


>UNIPROTKB|P96614 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:224308 "Bacillus subtilis subsp. subtilis str. 168"
            [GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
            "response to cold" evidence=IGI] [GO:0010501 "RNA secondary
            structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
            evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
            GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
            EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
            ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
            EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
            PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
            GO:GO:0010501 Uniprot:P96614
        Length = 494

 Score = 319 (117.4 bits), Expect = 2.1e-28, P = 2.1e-28
 Identities = 75/221 (33%), Positives = 121/221 (54%)

Query:    19 EKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IAS 77
             E     I+ + +      K   L+ L+ + +     IVF +TKR  DE++ AL     A+
Sbjct:   210 EMTVSNIQQFYLEVQERKKFDTLTRLLDIQSPE-LAIVFGRTKRRVDELAEALNLRGYAA 268

Query:    78 EALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHR 137
             E +HGD++Q +R   L  F++G   VLVATDVAARGLDI  V  + ++++P DPE++VHR
Sbjct:   269 EGIHGDLTQAKRMVALRKFKEGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHR 328

Query:   138 SGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLN 197
              GRTGRAGK G A+   T  ++  +R++E+    K + +  P +++ LE   +  V  L 
Sbjct:   329 IGRTGRAGKTGMAMTFITPREKSMLRAIEQTTKRKMDRMKEPTLDEALEGQQQVTVERLR 388

Query:   198 GVHPES-VEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPP 237
                 E+ + F+   A  L+E+   DA+    A +   ++ P
Sbjct:   389 TTISENNLNFYMTAAAELLEDH--DAVTVVAAAIKMATKEP 427


>UNIPROTKB|Q65N62 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
            evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
            EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
            ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
            EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
            GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
            GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
            PATRIC:18946609 ProtClustDB:CLSK886742
            BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
        Length = 487

 Score = 314 (115.6 bits), Expect = 7.2e-28, P = 7.2e-28
 Identities = 72/223 (32%), Positives = 122/223 (54%)

Query:    19 EKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IAS 77
             E     I+ + +      K   L+ L+ + +     IVF +TKR  DE++ AL      +
Sbjct:   210 EMTVSNIQQFYLEVHERKKFDTLTRLLDIQSPE-LAIVFGRTKRRVDELTEALNLRGYTA 268

Query:    78 EALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHR 137
             E +HGD++Q +R   L  F+QG   VLVATDVAARGLDI  V  + ++++P DPE++VHR
Sbjct:   269 EGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHR 328

Query:   138 SGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLN 197
              GRTGRAGK G A+   T  ++  +R++E+    K + +  P +++ +E   +  V  + 
Sbjct:   329 IGRTGRAGKTGMAMTFITPREKDMLRAIEQTTKRKMDRMKAPTLDEAIEGQQQVTVDRIR 388

Query:   198 GVHPES-VEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 239
              +  E+ + F+   A  L+E+   D++    A +   ++ P +
Sbjct:   389 TIIEENNLNFYMTAAAELLEDH--DSVTVVAAAIKMMTKEPDN 429


>ASPGD|ASPL0000077157 [details] [associations]
            symbol:AN10557 species:162425 "Emericella nidulans"
            [GO:0071470 "cellular response to osmotic stress" evidence=IEA]
            [GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
            [GO:0031137 "regulation of conjugation with cellular fusion"
            evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            [GO:0010628 "positive regulation of gene expression" evidence=IEA]
            [GO:0097308 "cellular response to farnesol" evidence=IEP]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] [GO:0033592 "RNA strand annealing activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
            PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
        Length = 668

 Score = 311 (114.5 bits), Expect = 6.0e-27, P = 6.0e-27
 Identities = 66/154 (42%), Positives = 94/154 (61%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS-LAL 71
             +VG+  E + + ++ Y        KR++L D++  +   G T++F +TKR AD +S   +
Sbjct:   412 RVGSTSENITQKVE-YVEDH---DKRSVLLDILHTHGTTGLTLIFVETKRMADALSEFLI 467

Query:    72 TSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                  + A+HGD +Q +RER L  FR G++ +LVAT VAARGLDIPNV  +I+Y+LP D 
Sbjct:   468 NQRFPATAIHGDRTQRERERALEMFRSGRYPILVATAVAARGLDIPNVTHVINYDLPTDI 527

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             + +VHR GRTGRAG  G A   F    R  VR L
Sbjct:   528 DDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDL 561


>TIGR_CMR|SO_4034 [details] [associations]
            symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
            acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
            ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
            PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
        Length = 623

 Score = 309 (113.8 bits), Expect = 8.1e-27, P = 8.1e-27
 Identities = 73/189 (38%), Positives = 105/189 (55%)

Query:    55 IVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 113
             I+F +T+    E++  L +   AS  LHGD++Q  RER +   + GK  +L+ATDVAARG
Sbjct:   248 IIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVEQLKNGKLDILIATDVAARG 307

Query:   114 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKF 173
             LD+  +  +++Y++P D E +VHR GRTGRAG+ G AIL  TS + R +R++ER    + 
Sbjct:   308 LDVERIGHVVNYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTIERATNSRI 367

Query:   174 EFVSPPVVEDVLESS----AEQVVATLNGVHPESVEFFTPTAQRLIE--EKGTDALAAAL 227
               +  P  E V E       EQ+  T+N      +EF      +L +  E  TD LAAAL
Sbjct:   368 SPMKVPSPETVAERRLSRLGEQLAQTMNN----DLEFMREAVAQLCQQLEVDTDLLAAAL 423

Query:   228 AQLSGFSRP 236
                    RP
Sbjct:   424 LHQVQQERP 432


>GENEDB_PFALCIPARUM|PFL0100c [details] [associations]
            symbol:PFL0100c "ATP dependent RNA helicase,
            putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
            metabolic process" evidence=ISS] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
            evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014188 GO:GO:0016070 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 KO:K01509
            RefSeq:XP_001350429.2 GeneID:811073 KEGG:pfa:PFL0100c
            EuPathDB:PlasmoDB:PF3D7_1202000 HOGENOM:HOG000281143
            ProtClustDB:CLSZ2433078 Uniprot:Q8I625
        Length = 841

 Score = 305 (112.4 bits), Expect = 4.5e-26, P = 4.5e-26
 Identities = 69/213 (32%), Positives = 117/213 (54%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSIIASEA--LHGDISQHQRERTLNGFRQGKFTVLVAT 107
             K  K I+F  TK + ++  L   S++   A  +H ++   Q+   +N F+ GK  VL+ T
Sbjct:   505 KINKCIIFANTKEEVEK--LYEISLLKPHAVMMHSELLTIQKNENINLFKVGKKNVLITT 562

Query:   108 DVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLER 167
             D+ +RGLDI NV  I++Y  P  P  ++HRSGRTGR  ++G  + M+   + R V  + +
Sbjct:   563 DIISRGLDIDNVIFILNYSPPTSPNDYIHRSGRTGRGKEKGICLTMYHKYEYRNVDKIMK 622

Query:   168 DVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAAL 227
                 KFE +  P VEDV + S +++V  +  + PE  EFF   ++ L+++  T  +A  L
Sbjct:   623 YTKNKFEVILCPKVEDVYKFSVDKLVENVMKIAPEKYEFFNEKSKELLKKHNTKIIAQIL 682

Query:   228 AQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAF 260
             + L  F +     SL++ ++ +V + L +D  F
Sbjct:   683 SILLKFDKKSFDVSLLSGKKNYVAV-LIKDPFF 714


>UNIPROTKB|Q8I625 [details] [associations]
            symbol:PFL0100c "ATP-dependent RNA Helicase, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
            "cellular_component" evidence=ND] [GO:0016070 "RNA metabolic
            process" evidence=ISS] InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003676 EMBL:AE014188 GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            KO:K01509 RefSeq:XP_001350429.2 GeneID:811073 KEGG:pfa:PFL0100c
            EuPathDB:PlasmoDB:PF3D7_1202000 HOGENOM:HOG000281143
            ProtClustDB:CLSZ2433078 Uniprot:Q8I625
        Length = 841

 Score = 305 (112.4 bits), Expect = 4.5e-26, P = 4.5e-26
 Identities = 69/213 (32%), Positives = 117/213 (54%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSIIASEA--LHGDISQHQRERTLNGFRQGKFTVLVAT 107
             K  K I+F  TK + ++  L   S++   A  +H ++   Q+   +N F+ GK  VL+ T
Sbjct:   505 KINKCIIFANTKEEVEK--LYEISLLKPHAVMMHSELLTIQKNENINLFKVGKKNVLITT 562

Query:   108 DVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLER 167
             D+ +RGLDI NV  I++Y  P  P  ++HRSGRTGR  ++G  + M+   + R V  + +
Sbjct:   563 DIISRGLDIDNVIFILNYSPPTSPNDYIHRSGRTGRGKEKGICLTMYHKYEYRNVDKIMK 622

Query:   168 DVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAAL 227
                 KFE +  P VEDV + S +++V  +  + PE  EFF   ++ L+++  T  +A  L
Sbjct:   623 YTKNKFEVILCPKVEDVYKFSVDKLVENVMKIAPEKYEFFNEKSKELLKKHNTKIIAQIL 682

Query:   228 AQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAF 260
             + L  F +     SL++ ++ +V + L +D  F
Sbjct:   683 SILLKFDKKSFDVSLLSGKKNYVAV-LIKDPFF 714


>SGD|S000005730 [details] [associations]
            symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
            helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
            "translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
            [GO:0033592 "RNA strand annealing activity" evidence=IDA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
            EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
            EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
            RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
            DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
            PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
            GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
            KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
            GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
        Length = 604

 Score = 300 (110.7 bits), Expect = 7.1e-26, P = 7.1e-26
 Identities = 71/178 (39%), Positives = 109/178 (61%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS--LA 70
             +VG+  E + + + LY  +     K++ L DL++  +  G T++F +TKR AD+++  L 
Sbjct:   366 RVGSTSENITQKV-LYVENQ---DKKSALLDLLSA-STDGLTLIFVETKRMADQLTDFLI 420

Query:    71 LTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPND 130
             + +  A+ A+HGD +Q +RER L  FR G  T+LVAT VAARGLDIPNV  +I+Y+LP+D
Sbjct:   421 MQNFRAT-AIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHVINYDLPSD 479

Query:   131 PETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESS 188
              + +VHR GRTGRAG  G A   F S     V+ L  ++  +     P  ++D + S+
Sbjct:   480 VDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLH-EILTEANQEVPSFLKDAMMSA 536


>CGD|CAL0004832 [details] [associations]
            symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
            "cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
            evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
            [GO:0071470 "cellular response to osmotic stress" evidence=IEA]
            [GO:0031137 "regulation of conjugation with cellular fusion"
            evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
            ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
            KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
        Length = 672

 Score = 298 (110.0 bits), Expect = 1.6e-25, P = 1.6e-25
 Identities = 67/154 (43%), Positives = 97/154 (62%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +VG+  E + + I LY        K++++ DL++   + G TIVFT+TKR AD ++  L 
Sbjct:   410 RVGSTSENITQKI-LYVEDD---EKKSVILDLLSAN-ENGLTIVFTETKRMADNLADYLY 464

Query:    73 SI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                  + A+HGD SQ++RE+ L  F+ G   +LVAT VAARGLDIPNV  +I+Y+LP+D 
Sbjct:   465 DQGFPATAIHGDRSQYEREKALAAFKNGAAPILVATAVAARGLDIPNVSHVINYDLPSDI 524

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             + +VHR GRTGRAG  G A   F  + +  V+ L
Sbjct:   525 DDYVHRIGRTGRAGNVGIATAFFNRNNKNVVKGL 558


>TIGR_CMR|SPO_1443 [details] [associations]
            symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
            GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
            ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
            PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
        Length = 471

 Score = 292 (107.8 bits), Expect = 1.9e-25, P = 1.9e-25
 Identities = 69/175 (39%), Positives = 103/175 (58%)

Query:     3 NYFVMFSHSTQVGNQ---DEKLAEGIKLYAISTT---ATSKRTILSDLITVYAKGGK--- 53
             N F+      +V  Q    E + +G+ L+  S     A+ KR +L  LI   A+G K   
Sbjct:   197 NTFLSAPARIEVARQATASETIEQGVVLFKGSRRDREASEKRAVLRALID--AEGEKCTN 254

Query:    54 TIVFTQTKRDADEVSLALTSIIASEA-LHGDISQHQRERTLNGFRQGKFTVLVATDVAAR 112
              I+F   K D D V+ +L       A +HGD+ Q QR RTL+GFR+GK  +LVA+DVAAR
Sbjct:   255 AIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQRTRTLDGFREGKLRLLVASDVAAR 314

Query:   113 GLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLER 167
             GLD+P+V  + ++++P  PE +VHR GRTGRAG++G AI +      + + ++E+
Sbjct:   315 GLDVPSVSHVFNFDVPGHPEDYVHRIGRTGRAGRDGKAITLCIPRDEKALDAIEK 369


>UNIPROTKB|Q9KLE2 [details] [associations]
            symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
            process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
            ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
            KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
            Uniprot:Q9KLE2
        Length = 663

 Score = 295 (108.9 bits), Expect = 3.2e-25, P = 3.2e-25
 Identities = 71/187 (37%), Positives = 109/187 (58%)

Query:    54 TIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAAR 112
             +IVF +T++D + ++  L +    + ALHGDI Q  RERT++  +QG   +LVATDV AR
Sbjct:   268 SIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDVVAR 327

Query:   113 GLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCK 172
             GLD+P +  + +Y++P D E+++HR GRTGRAG++G AIL+  ++Q R +R++ER     
Sbjct:   328 GLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERVTRSS 387

Query:   173 FEFVSPPVVEDVLESSAEQVVATLNGVHP-ESVEFFTPTAQRLIEEKGTDA--LAAALAQ 229
              E +  P  + V ES   ++   L       S+E F    ++L      DA  LAA L +
Sbjct:   388 MEEIQLPHRDKVAESRLTKLGQELAADKEFSSLERFADLVEKLQASLEIDATTLAAILLK 447

Query:   230 LSGFSRP 236
                  RP
Sbjct:   448 RQQGKRP 454


>TIGR_CMR|VC_A0804 [details] [associations]
            symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
            "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
            ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
            KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
            Uniprot:Q9KLE2
        Length = 663

 Score = 295 (108.9 bits), Expect = 3.2e-25, P = 3.2e-25
 Identities = 71/187 (37%), Positives = 109/187 (58%)

Query:    54 TIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAAR 112
             +IVF +T++D + ++  L +    + ALHGDI Q  RERT++  +QG   +LVATDV AR
Sbjct:   268 SIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDVVAR 327

Query:   113 GLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCK 172
             GLD+P +  + +Y++P D E+++HR GRTGRAG++G AIL+  ++Q R +R++ER     
Sbjct:   328 GLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERVTRSS 387

Query:   173 FEFVSPPVVEDVLESSAEQVVATLNGVHP-ESVEFFTPTAQRLIEEKGTDA--LAAALAQ 229
              E +  P  + V ES   ++   L       S+E F    ++L      DA  LAA L +
Sbjct:   388 MEEIQLPHRDKVAESRLTKLGQELAADKEFSSLERFADLVEKLQASLEIDATTLAAILLK 447

Query:   230 LSGFSRP 236
                  RP
Sbjct:   448 RQQGKRP 454


>TIGR_CMR|CPS_1590 [details] [associations]
            symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
            STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
            OMA:AISECGY ProtClustDB:CLSK768209
            BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
        Length = 455

 Score = 289 (106.8 bits), Expect = 3.3e-25, P = 3.3e-25
 Identities = 75/177 (42%), Positives = 103/177 (58%)

Query:    19 EKLAEG-IKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS--LALTSII 75
             E    G IK      T   KR +LS+LI V     + +VF  TK  A+ ++  L L  I 
Sbjct:   229 ENTTSGKIKQAVYWVTEERKRELLSELIGVN-NWQQVLVFAGTKESANTLAKELKLDGIK 287

Query:    76 ASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFV 135
             A+   HGD +Q  R + L  F +GK  VLVATDVAARGLDIP++  ++++ LP  PE +V
Sbjct:   288 AA-LCHGDKTQGARNKALEQFSEGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYV 346

Query:   136 HRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE-DVLESSAEQ 191
             HR GRTGRAGK GTAI + +    R + ++E+ +  KFE +  P  E + LE+S  Q
Sbjct:   347 HRVGRTGRAGKSGTAISLVSPKDERFLENIEQLIERKFERIVAPGYEFNRLEASEYQ 403


>SGD|S000006040 [details] [associations]
            symbol:DBP1 "Putative ATP-dependent RNA helicase of the
            DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
            [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
            "translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
            helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
            SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
            STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
            KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
            NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
            Uniprot:P24784
        Length = 617

 Score = 292 (107.8 bits), Expect = 5.6e-25, P = 5.6e-25
 Identities = 70/165 (42%), Positives = 103/165 (62%)

Query:     3 NYFVMFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKR 62
             NY  +F    +VG+  E + + I LY        K++ L DL++   KG  T++F +TKR
Sbjct:   370 NY--IFLSVGRVGSTSENITQRI-LYVDDM---DKKSALLDLLSAEHKG-LTLIFVETKR 422

Query:    63 DADEVS--LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVD 120
              AD+++  L + +  A+ A+HGD +Q +RER L+ F+     +LVAT VAARGLDIPNV 
Sbjct:   423 MADQLTDFLIMQNFKAT-AIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNVT 481

Query:   121 LIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
              +I+Y+LP+D + +VHR GRTGRAG  G A   F S+ +  V+ L
Sbjct:   482 HVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNIVKGL 526


>SGD|S000001107 [details] [associations]
            symbol:RRP3 "Protein involved in rRNA processing"
            species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
            biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
            SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
            LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
            evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
            GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
            OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
            RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
            DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
            PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
            KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
            GermOnline:YHR065C Uniprot:P38712
        Length = 501

 Score = 289 (106.8 bits), Expect = 5.7e-25, P = 5.7e-25
 Identities = 66/176 (37%), Positives = 113/176 (64%)

Query:    37 KRTILSDLITVYAKGGKT-IVFTQTKRDADEVSLALTSII--ASEALHGDISQHQRERTL 93
             K T L  L+  +   GKT I+FT+TK +A+ +S  L +++  ++ ALHGD++Q+QR  +L
Sbjct:   308 KNTYLIYLLNEFI--GKTMIIFTRTKANAERLS-GLCNLLEFSATALHGDLNQNQRMGSL 364

Query:    94 NGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILM 153
             + F+ GK ++LVATDVAARGLDIP+VD++++Y++P D ++++HR GRT RAG+ G +I +
Sbjct:   365 DLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISL 424

Query:   154 FTSSQRRTVRSLERDVGCKF--EFVSPPVV---EDVLESSAEQVVATLNGVHPESV 204
              +      +  +E  +G K   E V   ++    D ++ +  +VV  +N  + E +
Sbjct:   425 VSQYDLELILRIEEVLGKKLPKESVDKNIILTLRDSVDKANGEVVMEMNRRNKEKI 480


>POMBASE|SPCC1795.11 [details] [associations]
            symbol:sum3 "translation initiation RNA helicase Sum3"
            species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
            translational initiation" evidence=IMP] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
            "regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
            "positive regulation of gene expression" evidence=IMP] [GO:0031047
            "gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
            conjugation with cellular fusion" evidence=IGI] [GO:0071470
            "cellular response to osmotic stress" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
            GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
            GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
            OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
            EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
            ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
            MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
            EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
            NextBio:20799875 Uniprot:O13370
        Length = 636

 Score = 291 (107.5 bits), Expect = 7.8e-25, P = 7.8e-25
 Identities = 60/154 (38%), Positives = 94/154 (61%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS-LAL 71
             +VG+  E + + +    +    + KR+ L D++      G T++F +TKR AD ++   L
Sbjct:   396 RVGSTSENITQKV----VHVEDSEKRSYLLDILHTLPPEGLTLIFVETKRMADTLTDYLL 451

Query:    72 TSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
              S   + ++HGD +Q +RER L  FR G+ +++VAT VA+RGLDIPNV  +I+Y+LP D 
Sbjct:   452 NSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDI 511

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             + +VHR GRTGRAG  G A+  F  + +   + L
Sbjct:   512 DDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKEL 545


>TAIR|locus:2222617 [details] [associations]
            symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
            "plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
            wall modification" evidence=RCA] InterPro:IPR000629
            InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
            PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
            SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
            Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
            ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
            EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
            OMA:YLIPGFM Uniprot:F4K6V1
        Length = 712

 Score = 291 (107.5 bits), Expect = 1.0e-24, P = 1.0e-24
 Identities = 66/170 (38%), Positives = 93/170 (54%)

Query:    14 VGNQDEKLAEGIKLYAISTTAT-SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +GN DE +A       I   A   K + L  ++     G K I+F  TKR  D+++  LT
Sbjct:   436 IGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCSTKRMCDQLARNLT 495

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
                 + A+HGD SQ +R+  LN FR G+  VLVATDVAARGLD+ ++ ++++Y+ PN  E
Sbjct:   496 RTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVE 555

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 182
              +VHR GRTGRAG  G A   F     +    L + +    + V P V E
Sbjct:   556 DYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQVRE 605


>TAIR|locus:2084178 [details] [associations]
            symbol:DRH1 "DEAD box RNA helicase 1" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
            PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
            SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
            EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
            EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
            PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
            RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
            ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
            PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
            EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
            KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
            OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
            Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
        Length = 619

 Score = 288 (106.4 bits), Expect = 1.5e-24, P = 1.5e-24
 Identities = 65/170 (38%), Positives = 92/170 (54%)

Query:    14 VGNQDEKLAEGIKLYAISTTAT-SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +GN DE +A       I   A   K+  L  ++     G K I+F  TKR  D+++  LT
Sbjct:   365 IGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLT 424

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
                 + A+HGD SQ +R+  LN FR G+  VLVATDVAARGLD+ ++  +++Y+ PN  E
Sbjct:   425 RQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVE 484

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 182
              +VHR GRTGRAG  G A   F     +    L + +    + V P + E
Sbjct:   485 DYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIRE 534


>UNIPROTKB|P0A9P6 [details] [associations]
            symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
            "Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0000027 "ribosomal large
            subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
            process" evidence=IGI] [GO:0003724 "RNA helicase activity"
            evidence=IDA] [GO:0070417 "cellular response to cold"
            evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
            GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
            GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
            RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
            DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
            PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
            EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
            KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
            EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
            BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
            Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
        Length = 629

 Score = 284 (105.0 bits), Expect = 4.3e-24, P = 4.3e-24
 Identities = 71/186 (38%), Positives = 109/186 (58%)

Query:    55 IVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 113
             I+F +TK    EV+ AL  +   S AL+GD++Q  RE+TL   + G+  +L+ATDVAARG
Sbjct:   249 IIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARG 308

Query:   114 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKF 173
             LD+  + L+++Y++P D E++VHR GRTGRAG+ G A+L   + +RR +R++ER +    
Sbjct:   309 LDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTI 368

Query:   174 EFVSPPVVEDV----LESSAEQVVATLNGVHPES----VEFFTPTAQRLIEEKGTDALAA 225
               V  P  E +    LE  A +V   L     +     +    PTA+   EE   + LAA
Sbjct:   369 PEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSKIQPTAEG--EELDLETLAA 426

Query:   226 ALAQLS 231
             AL +++
Sbjct:   427 ALLKMA 432


>UNIPROTKB|Q11039 [details] [associations]
            symbol:deaD "Cold-shock DEAD box protein A homolog"
            species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
            GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
            GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
            PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
            RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
            PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
            EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
            GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
            PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
            ProtClustDB:CLSK791051 Uniprot:Q11039
        Length = 563

 Score = 282 (104.3 bits), Expect = 5.2e-24, P = 5.2e-24
 Identities = 60/165 (36%), Positives = 99/165 (60%)

Query:    55 IVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 113
             IVF +TK+  +E++  L +   ++ A+ GD+ Q QRERT+   R G   +LVATDVAARG
Sbjct:   254 IVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAARG 313

Query:   114 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKF 173
             LD+  +  +++Y++P+D E++VHR GRTGRAG+ G A++  +  +   ++++E+      
Sbjct:   314 LDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAIEKATRQTL 373

Query:   174 EFVSPPVVEDV-LESSAEQVVATLNGVHPESVEFFTPTAQRLIEE 217
                  P VEDV  +  A+   +  N +    +E F    +RL+EE
Sbjct:   374 TEAQLPTVEDVNTQRVAKFADSITNALGGPGIELF----RRLVEE 414


>TAIR|locus:2032910 [details] [associations]
            symbol:RH36 "RNA helicase 36" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
            development" evidence=IMP] [GO:0009791 "post-embryonic development"
            evidence=IMP] [GO:0090406 "pollen tube" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0009561 "megagametogenesis"
            evidence=IMP] [GO:0006606 "protein import into nucleus"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
            GO:GO:0009791 GO:GO:0009561 EMBL:AC006341 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
            HOGENOM:HOG000268802 OMA:EVRTVEQ GO:GO:0090406 IPI:IPI00521131
            PIR:G86297 RefSeq:NP_173078.1 UniGene:At.51634
            ProteinModelPortal:Q9SA27 SMR:Q9SA27 PaxDb:Q9SA27 PRIDE:Q9SA27
            EnsemblPlants:AT1G16280.1 GeneID:838197 KEGG:ath:AT1G16280
            KEGG:dosa:Os07t0633500-00 GeneFarm:1012 TAIR:At1g16280
            InParanoid:Q9SA27 PhylomeDB:Q9SA27 ProtClustDB:CLSN2679781
            Genevestigator:Q9SA27 GermOnline:AT1G16280 Uniprot:Q9SA27
        Length = 491

 Score = 279 (103.3 bits), Expect = 6.7e-24, P = 6.7e-24
 Identities = 58/139 (41%), Positives = 87/139 (62%)

Query:    50 KGGKT-IVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVAT 107
             KG ++ ++F  T R    +SL L  + + + A+H   SQ  R   L+ F+ GK  +L+AT
Sbjct:   300 KGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLAT 359

Query:   108 DVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLER 167
             DVA+RGLDIP VDL+I+Y++P DP  +VHR GRT RAG+ G A+ + T +  + +  +E 
Sbjct:   360 DVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEE 419

Query:   168 DVGCKFEFVSPPVVEDVLE 186
             +VG K E  +  V+ D LE
Sbjct:   420 EVGKKMEPYNKKVITDSLE 438


>TIGR_CMR|SO_1383 [details] [associations]
            symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
            ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
            PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
        Length = 433

 Score = 276 (102.2 bits), Expect = 7.3e-24, P = 7.3e-24
 Identities = 63/147 (42%), Positives = 90/147 (61%)

Query:    37 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNG 95
             KR +LS+LI       + +VFT T+  AD +   L    I SE +HG+ +Q  R R L  
Sbjct:   231 KRELLSELIGK-KNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALRE 289

Query:    96 FRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 155
             F  GK  VLVAT+VAARGLDIP+++ +++++LP   E +VHR GRTGRAGK G AI   +
Sbjct:   290 FVSGKVRVLVATEVAARGLDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAISFVS 349

Query:   156 SSQRRTVRSLERDVGCKFEFVSPPVVE 182
               + RT+  +E+ +G K   ++ P  E
Sbjct:   350 REEERTLADIEKLIGQKIRRITVPGYE 376


>TAIR|locus:2076351 [details] [associations]
            symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
            evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
            GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
            EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
            IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
            RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
            UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
            STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
            EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
            KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
            OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
            Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
        Length = 612

 Score = 281 (104.0 bits), Expect = 8.5e-24, P = 8.5e-24
 Identities = 68/171 (39%), Positives = 100/171 (58%)

Query:     1 MLNYFVMFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYA----KGGKTIV 56
             M NY  +F    +VG+  + + + ++    S     KR+ L DL+        K   T+V
Sbjct:   360 MSNY--IFLAVGRVGSSTDLITQRVEFVQES----DKRSHLMDLLHAQRETQDKQSLTLV 413

Query:    57 FTQTKRDADEVS--LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGL 114
             F +TKR AD +   L +    A+ ++HGD +Q +RE  L  F+ G+  +LVATDVAARGL
Sbjct:   414 FVETKRGADTLENWLCMNEFPAT-SIHGDRTQQEREVALRSFKTGRTPILVATDVAARGL 472

Query:   115 DIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             DIP+V  +++++LPND + +VHR GRTGRAGK G A   F  +  +  RSL
Sbjct:   473 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSL 523


>TIGR_CMR|CPS_1726 [details] [associations]
            symbol:CPS_1726 "RNA helicase DeaD" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
            STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
            OMA:WIVKGVE ProtClustDB:CLSK741103
            BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
        Length = 611

 Score = 279 (103.3 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 60/150 (40%), Positives = 90/150 (60%)

Query:    19 EKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IAS 77
             +K    I  YA   +  +K T L  +  V  +    I+F +T+ D  +++  L      +
Sbjct:   223 KKAKANITQYAWKVSGITKMTALERIAEV-VEYDAMIIFVRTRNDTVDIAEKLERAGYPA 281

Query:    78 EALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHR 137
              AL+GD++Q QRER ++  + GK ++LVATDV ARGLDIP + L+I+Y+LP D E +VHR
Sbjct:   282 LALNGDLNQAQRERCIDQMKSGKSSILVATDVVARGLDIPRISLVINYDLPGDNEAYVHR 341

Query:   138 SGRTGRAGKEGTAILMFTSSQRRTVRSLER 167
              GRTGRAG+EG +I      +  ++R  ER
Sbjct:   342 IGRTGRAGREGMSIAFVRPREMYSIRHYER 371


>UNIPROTKB|G3N2S5 [details] [associations]
            symbol:Bt.75622 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00680000100003 EMBL:DAAA02039547
            Ensembl:ENSBTAT00000065964 Uniprot:G3N2S5
        Length = 546

 Score = 277 (102.6 bits), Expect = 1.7e-23, P = 1.7e-23
 Identities = 76/234 (32%), Positives = 117/234 (50%)

Query:    19 EKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASE 78
             +K+A  ++  AI    T K  ++ D        G TIVF + K++  E+S  +     ++
Sbjct:   251 QKMAITVEHLAIKCHRTRKAAVIGDS----GFQGPTIVFCEMKKETQELSQNVAVRYDAQ 306

Query:    79 ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRS 138
             +LH    + QR+ T  GFR G F V V T+VAARGLDIP V LI    LP D E+ +  S
Sbjct:   307 SLH----RKQRQITRKGFRNGDFGVWVPTNVAARGLDIPEVHLIFQSSLPKDAES-LRSS 361

Query:   139 GRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG 198
               T R G  G  I      +   +  +E+ VG  F+ +      +++++S E  +  L+ 
Sbjct:   362 FWTRRVGMTGICICFSQHKEEYQLAQVEQKVGITFKRIGVRSETEIIKASGEDAIRLLDS 421

Query:   199 VHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTL 252
             V P ++  F  +A+ L  E+GT   A AL   SG +     RS+ N   G+VT+
Sbjct:   422 VPPAAIGHFEQSAENLTGEQGTLEAATALTHFSG-ATSVDQRSVNNSNAGFVTM 474


>CGD|CAL0000056 [details] [associations]
            symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
            "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
            transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
            EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
            ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
            KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
        Length = 539

 Score = 274 (101.5 bits), Expect = 3.4e-23, P = 3.4e-23
 Identities = 66/162 (40%), Positives = 92/162 (56%)

Query:    37 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEA--LHGDISQHQRERTLN 94
             K TIL  L+  +  G   IVFT+T   A   +L L  I+   A  LHG +SQ QR  +LN
Sbjct:   349 KNTILIHLLNEFM-GKSIIVFTRTVAHAQRTAL-LARILGFNAVPLHGQLSQSQRLGSLN 406

Query:    95 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 154
              F+  +  +LVATDVAARGLDIP+VD++I+Y++P D + ++HR GRT RAG+ G +I + 
Sbjct:   407 KFKSNQANILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLI 466

Query:   155 TSSQRRTVRSLERDVGCKF--EFVSPPVVEDVLESSAEQVVA 194
             T         +E  +G K   E   P  V D L    ++  A
Sbjct:   467 TQYDLEMYLRIESVLGKKLPKEDKPPKEVLDALHVHVDKATA 508


>UNIPROTKB|P21693 [details] [associations]
            symbol:dbpA species:83333 "Escherichia coli K-12"
            [GO:0003724 "RNA helicase activity" evidence=IDA] [GO:0016887
            "ATPase activity" evidence=IDA] [GO:0033677 "DNA/RNA helicase
            activity" evidence=IDA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IDA]
            [GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
            [GO:0034459 "ATP-dependent 3'-5' RNA helicase activity"
            evidence=IDA] [GO:0019843 "rRNA binding" evidence=IDA] [GO:0043531
            "ADP binding" evidence=IDA] [GO:0005524 "ATP binding"
            evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043531
            GO:GO:0019843 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            EMBL:X52647 PIR:B64884 RefSeq:NP_415859.1 RefSeq:YP_489613.1
            ProteinModelPortal:P21693 SMR:P21693 IntAct:P21693 PRIDE:P21693
            EnsemblBacteria:EBESCT00000004879 EnsemblBacteria:EBESCT00000014318
            GeneID:12933991 GeneID:947153 KEGG:ecj:Y75_p1320 KEGG:eco:b1343
            PATRIC:32117966 EchoBASE:EB0206 EcoGene:EG10210
            HOGENOM:HOG000268809 KO:K05591 OMA:HIDPARF ProtClustDB:PRK11776
            BioCyc:EcoCyc:EG10210-MONOMER BioCyc:ECOL316407:JW1337-MONOMER
            BioCyc:MetaCyc:EG10210-MONOMER Genevestigator:P21693 GO:GO:0034459
            GO:GO:0033677 InterPro:IPR005580 Pfam:PF03880 Uniprot:P21693
        Length = 457

 Score = 271 (100.5 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 61/168 (36%), Positives = 92/168 (54%)

Query:    32 TTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASE-ALHGDISQHQRE 90
             T++  K  +L  L++++ +    +VF  TK+D   V  AL  +  S  +LHGD+ Q  R+
Sbjct:   223 TSSKGKIPLLQRLLSLH-QPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRD 281

Query:    91 RTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTA 150
             +TL  F  G   VLVATDVAARGLDI +++L++++EL  DPE  VHR GRT RAG  G A
Sbjct:   282 QTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLA 341

Query:   151 ILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG 198
             I      + +    +   +  K  + +PP    +    AE     ++G
Sbjct:   342 ISFCAPEEAQRANIISDMLQIKLNWQTPPANSSIATLEAEMATLCIDG 389


>ASPGD|ASPL0000006660 [details] [associations]
            symbol:AN5931 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
            EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
            ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
            EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
            OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
        Length = 563

 Score = 274 (101.5 bits), Expect = 3.9e-23, P = 3.9e-23
 Identities = 57/136 (41%), Positives = 86/136 (63%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             +G K +VFT TKR ADE++  L      + ++HGD  Q +R+  LN F+ GK  ++VATD
Sbjct:   386 RGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATD 445

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERD 168
             VA+RG+D+ ++  +I+Y+ PN+ E +VHR GRTGRAG +GTAI  FT+   +  R L   
Sbjct:   446 VASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNAKQARDLVTI 505

Query:   169 VGCKFEFVSPPVVEDV 184
             +    + + P + E V
Sbjct:   506 LSEAKQQIDPRLAEMV 521


>UNIPROTKB|Q48PB7 [details] [associations]
            symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
            putative" species:264730 "Pseudomonas syringae pv. phaseolicola
            1448A" [GO:0006139 "nucleobase-containing compound metabolic
            process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
            activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
            KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
            ProtClustDB:CLSK865855 Uniprot:Q48PB7
        Length = 625

 Score = 275 (101.9 bits), Expect = 4.0e-23, P = 4.0e-23
 Identities = 60/146 (41%), Positives = 93/146 (63%)

Query:    23 EGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 81
             E I+       A  KR++L+ LITV A   + +VFT+TK  A+ ++  L    +A+ A+H
Sbjct:   222 ERIEQRVFRLAANHKRSLLAHLITVGA-WEQVLVFTRTKHGANRLAEYLDKHGLAAVAIH 280

Query:    82 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 141
             G+ SQ+ R + L  F+ G   ++VATD+AARGLDI  +  ++++ELPN  E +VHR GRT
Sbjct:   281 GNKSQNARTKALADFKAGDVRIMVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRT 340

Query:   142 GRAGKEGTAILMFTSSQRRTVRSLER 167
             GRAG+ G AI +    + + ++S+ER
Sbjct:   341 GRAGRSGEAISLVAPDEEKLLKSIER 366


>UNIPROTKB|Q0C354 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase RhlE"
            species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
            GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
            GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
            BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
        Length = 464

 Score = 271 (100.5 bits), Expect = 4.1e-23, P = 4.1e-23
 Identities = 57/119 (47%), Positives = 78/119 (65%)

Query:    55 IVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 113
             IVFT+TK  AD V   L    I S A+HG+ SQ QRE+ L  F+ G+  +LVATD+AARG
Sbjct:   254 IVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPILVATDIAARG 313

Query:   114 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCK 172
             + +  +  +I+Y+LP+ PE FVHR GRT RAG  G AI   +  +R T+R++E+  G K
Sbjct:   314 IHVDALTHVINYDLPDVPEQFVHRIGRTARAGNSGVAISFCSRDERPTLRAIEKLTGLK 372


>WB|WBGene00002244 [details] [associations]
            symbol:laf-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
            "masculinization of hermaphroditic germ-line" evidence=IMP]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
            EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
            ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
            KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
            ArrayExpress:D0PV95 Uniprot:D0PV95
        Length = 708

 Score = 276 (102.2 bits), Expect = 4.2e-23, P = 4.2e-23
 Identities = 65/164 (39%), Positives = 90/164 (54%)

Query:     3 NYFVMFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKR 62
             NY  +F    +VG+  E + + I    +      KR+ L DL+        T+VF +TKR
Sbjct:   450 NY--VFLAVGRVGSTSENIMQKI----VWVEEDEKRSYLMDLLDATGDSSLTLVFVETKR 503

Query:    63 DADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDL 121
              A +++  L         +HGD+ Q +RE+ L+ FR G   +LVAT VAARGLDIPNV  
Sbjct:   504 GASDLAYYLNRQNYEVVTIHGDLKQFEREKHLDLFRTGTAPILVATAVAARGLDIPNVKH 563

Query:   122 IIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             +I+Y+LP+D + +VHR GRTGR G  G A   F    R   R L
Sbjct:   564 VINYDLPSDVDEYVHRIGRTGRVGNVGLATSFFNDKNRNIAREL 607


>TIGR_CMR|GSU_0914 [details] [associations]
            symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
            GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
            ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
            PATRIC:22024603 ProtClustDB:CLSK924451
            BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
        Length = 447

 Score = 270 (100.1 bits), Expect = 4.4e-23, P = 4.4e-23
 Identities = 58/165 (35%), Positives = 93/165 (56%)

Query:    11 STQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLA 70
             + QVG     +     LY +      K  +L +L+  +      ++FT+TK  A  +   
Sbjct:   202 TVQVGTVAPAVTVAHALYPVEQHL--KTPLLLELLR-HTDTESVLIFTRTKHRAKRLGEQ 258

Query:    71 LTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPN 129
             L      + +L G++SQ++R+  L+GFR G F +LVATD+AARG+D+  V  +I+Y++P+
Sbjct:   259 LEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQILVATDIAARGIDVSQVSHVINYDIPD 318

Query:   130 DPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFE 174
               E ++HR GRTGRA + G A  + TS     VR++ER +G   E
Sbjct:   319 TAEAYIHRIGRTGRAARSGDAFTLVTSDDGAMVRAIERSLGAPIE 363


>UNIPROTKB|Q81JK1 [details] [associations]
            symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:1392 "Bacillus anthracis" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
            InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
            RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
            SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
            EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
            EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
            GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
            ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
            BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
        Length = 481

 Score = 271 (100.5 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 57/154 (37%), Positives = 90/154 (58%)

Query:    37 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNG 95
             K ++L D+ T+       I+F +T+ + D V   L  +    + +HG + Q  R   ++ 
Sbjct:   229 KLSLLKDVTTI-ENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDD 287

Query:    96 FRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 155
             FR+GKF  LVATDVAARG+DI N+  +I+Y++P + E++VHR+GRTGRAG  G AI   T
Sbjct:   288 FRKGKFRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFIT 347

Query:   156 SSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSA 189
               + R +  +E  +G      + P  E+V++  A
Sbjct:   348 PYEDRFLEEIEAYIGFAIPKANAPSKEEVMKGKA 381


>TIGR_CMR|BA_5703 [details] [associations]
            symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
            InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
            RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
            SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
            EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
            EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
            GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
            ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
            BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
        Length = 481

 Score = 271 (100.5 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 57/154 (37%), Positives = 90/154 (58%)

Query:    37 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNG 95
             K ++L D+ T+       I+F +T+ + D V   L  +    + +HG + Q  R   ++ 
Sbjct:   229 KLSLLKDVTTI-ENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDD 287

Query:    96 FRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 155
             FR+GKF  LVATDVAARG+DI N+  +I+Y++P + E++VHR+GRTGRAG  G AI   T
Sbjct:   288 FRKGKFRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFIT 347

Query:   156 SSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSA 189
               + R +  +E  +G      + P  E+V++  A
Sbjct:   348 PYEDRFLEEIEAYIGFAIPKANAPSKEEVMKGKA 381


>TAIR|locus:2041549 [details] [associations]
            symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
            EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
            UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
            PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
            KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
            OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
            GermOnline:AT2G42520 Uniprot:Q84W89
        Length = 633

 Score = 273 (101.2 bits), Expect = 6.8e-23, P = 6.8e-23
 Identities = 67/173 (38%), Positives = 99/173 (57%)

Query:     1 MLNYFVMFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGG---K---T 54
             + NY  +F    +VG+  + + + ++    S     KR+ L DL+    + G   K   T
Sbjct:   368 LANY--IFLAVGRVGSSTDLIVQRVEFVLDS----DKRSHLMDLLHAQRENGIQGKQALT 421

Query:    55 IVFTQTKRDADEVS--LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAAR 112
             +VF +TKR AD +   L +    A+ ++HGD +Q +RE  L  F+ G+  +LVATDVAAR
Sbjct:   422 LVFVETKRGADSLENWLCINGFPAT-SIHGDRTQQEREVALKAFKSGRTPILVATDVAAR 480

Query:   113 GLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             GLDIP+V  +++++LPND + +VHR GRTGRAGK G A   F        R L
Sbjct:   481 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARPL 533


>TAIR|locus:2081061 [details] [associations]
            symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
            "vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
            evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
            PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
            SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
            UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
            PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
            KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
            HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
            ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
            Uniprot:Q9SQV1
        Length = 1088

 Score = 277 (102.6 bits), Expect = 7.0e-23, P = 7.0e-23
 Identities = 64/172 (37%), Positives = 92/172 (53%)

Query:    14 VGNQDEKLA-EGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +G  DE  A + I  Y        K   L  ++    +G K I+F  TKR  D ++ ++ 
Sbjct:   642 IGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSVG 701

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
                 +  +HGD +Q +R+  LN FR GK  VL+ATDVAARGLDI ++ ++I+Y+ P   E
Sbjct:   702 RHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVE 761

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDV 184
              +VHR GRTGRAG  G A   FT    +    L + +    + V PP V D+
Sbjct:   762 DYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQV-PPQVRDI 812


>UNIPROTKB|Q4K4H4 [details] [associations]
            symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
            EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
            ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
            PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
        Length = 622

 Score = 271 (100.5 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 59/146 (40%), Positives = 93/146 (63%)

Query:    23 EGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALH 81
             E I+       A+ KR +L+ LIT  A   + +VFT+TK  A+ ++  L    +++ A+H
Sbjct:   222 ERIEQRVFRLPASHKRALLAHLITAGA-WEQVLVFTRTKHGANRLAEYLDKHGLSAVAIH 280

Query:    82 GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 141
             G+ SQ+ R + L  F+ G+  +LVATD+AARGLDI  +  ++++ELPN  E +VHR GRT
Sbjct:   281 GNKSQNARTKALADFKAGEVRILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRT 340

Query:   142 GRAGKEGTAILMFTSSQRRTVRSLER 167
             GRAG+ G AI +    + + ++S+ER
Sbjct:   341 GRAGRSGEAISLVAPDEEKLLKSIER 366


>FB|FBgn0003261 [details] [associations]
            symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
            splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
            evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
            chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
            GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
            GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
            EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
            RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
            RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
            RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
            ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
            MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
            EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
            CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
            OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
            Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
        Length = 719

 Score = 272 (100.8 bits), Expect = 1.2e-22, P = 1.2e-22
 Identities = 57/152 (37%), Positives = 90/152 (59%)

Query:    38 RTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGF 96
             +T+LSD+       GK I+F +TKR  D +   + S  +   A+HGD SQ +R+  L  F
Sbjct:   517 KTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREF 576

Query:    97 RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS 156
             R GK  +LVATDVAARGLD+  +  +I+++ P + E ++HR GRTGR+  +GT+   FT 
Sbjct:   577 RSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTK 636

Query:   157 SQRRTVRSLERDVGCKFEFVSPPVVEDVLESS 188
             +  +  ++L  DV  +      P +E++  +S
Sbjct:   637 NNAKQAKALV-DVLREANQEINPALENLARNS 667


>TAIR|locus:2162022 [details] [associations]
            symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
            EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
            IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
            UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
            PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
            KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
            OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
            Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
        Length = 591

 Score = 270 (100.1 bits), Expect = 1.2e-22, P = 1.2e-22
 Identities = 61/185 (32%), Positives = 98/185 (52%)

Query:     5 FVMFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDA 64
             F+   +   +G+ D K  + I           K   L  L+     G K ++F +TKR  
Sbjct:   364 FLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGC 423

Query:    65 DEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLII 123
             D+V+  L      + A+HGD +Q +R+R L  F+ G+  ++ ATDVAARGLD+ ++  ++
Sbjct:   424 DQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVV 483

Query:   124 HYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVED 183
             +Y+ PN  E ++HR GRTGRAG +G A   FT    +  R L + +    + V PP +  
Sbjct:   484 NYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVV-PPTLSA 542

Query:   184 VLESS 188
             ++ SS
Sbjct:   543 LVRSS 547


>WB|WBGene00006888 [details] [associations]
            symbol:vbh-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0032502 "developmental process"
            evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
            evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
            germ-line" evidence=IMP] [GO:0042127 "regulation of cell
            proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
            evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
            GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
            GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
            ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
            MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
            EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
            GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
            WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
            ArrayExpress:Q65XX1 Uniprot:Q65XX1
        Length = 660

 Score = 271 (100.5 bits), Expect = 1.2e-22, P = 1.2e-22
 Identities = 61/146 (41%), Positives = 85/146 (58%)

Query:    22 AEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SIIASEAL 80
             +E I+   +      KR+ L +++         +VF +TKR A+E++  L    I S ++
Sbjct:   369 SENIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSI 428

Query:    81 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 140
             HGD+ Q +RER L  FR G+  +LVAT VAARGLDIPNV  +I+Y+LP D + +VHR GR
Sbjct:   429 HGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGR 488

Query:   141 TGRAGKEGTAILMFTSSQRRTVRSLE 166
             TGR G  G A   F    R   R L+
Sbjct:   489 TGRCGNLGIATSFFNDKNRGIGRDLK 514


>UNIPROTKB|F1RX16 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
            signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
            of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
            "intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
            "cellular response to osmotic stress" evidence=IEA] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=IEA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
            "positive regulation of translational initiation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
            response" evidence=IEA] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043024 "ribosomal small subunit
            binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
            evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
            "negative regulation of protein complex assembly" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=IEA]
            [GO:0030307 "positive regulation of cell growth" evidence=IEA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
            "response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
            signaling pathway via death domain receptors" evidence=IEA]
            [GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IEA] [GO:0007059
            "chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
            EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
        Length = 661

 Score = 271 (100.5 bits), Expect = 1.2e-22, P = 1.2e-22
 Identities = 62/154 (40%), Positives = 86/154 (55%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +VG+  E + + +    +    + KR+ L DL+    K   T+VF +TK+ AD +   L 
Sbjct:   407 RVGSTSENITQKV----VWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLY 462

Query:    73 SI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D 
Sbjct:   463 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDI 522

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             E +VHR GRTGR G  G A   F        + L
Sbjct:   523 EEYVHRIGRTGRVGNLGLATSFFNERNANITKDL 556


>UNIPROTKB|I3LHW0 [details] [associations]
            symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
            Uniprot:I3LHW0
        Length = 621

 Score = 270 (100.1 bits), Expect = 1.4e-22, P = 1.4e-22
 Identities = 65/179 (36%), Positives = 98/179 (54%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT- 72
             VG  D    + +K   I TT   KR++  + +   +   K IVF   K  AD++S  L+ 
Sbjct:   423 VGTLDLVAVDTVKQNIIITTEEEKRSLFQEFLQSLSPKDKVIVFVSRKLIADDLSSDLSI 482

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
               I  ++LHGD  Q  RER L+ F+ GK  +L+ATD+A+RGLD+ +V  + +Y  P + E
Sbjct:   483 QGIPVQSLHGDREQSDRERALDDFKTGKVKILIATDLASRGLDVSDVTHVFNYNFPRNIE 542

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQ 191
              +VHR GRTGRAGK G ++ + T    +    L   +    +  +  + ED+L S AEQ
Sbjct:   543 EYVHRVGRTGRAGKMGESVTLMTQDDWKVAGELIEIL----QRANQSIPEDLL-SMAEQ 596


>UNIPROTKB|F1SQ03 [details] [associations]
            symbol:LOC100524536 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
            ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
            GeneID:100524536 Uniprot:F1SQ03
        Length = 630

 Score = 270 (100.1 bits), Expect = 1.4e-22, P = 1.4e-22
 Identities = 65/179 (36%), Positives = 98/179 (54%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT- 72
             VG  D    + +K   I TT   KR++  + +   +   K IVF   K  AD++S  L+ 
Sbjct:   432 VGTLDLVAVDTVKQNIIITTEEEKRSLFQEFLQSLSPKDKVIVFVSRKLIADDLSSDLSI 491

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
               I  ++LHGD  Q  RER L+ F+ GK  +L+ATD+A+RGLD+ +V  + +Y  P + E
Sbjct:   492 QGIPVQSLHGDREQSDRERALDDFKTGKVKILIATDLASRGLDVSDVTHVFNYNFPRNIE 551

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQ 191
              +VHR GRTGRAGK G ++ + T    +    L   +    +  +  + ED+L S AEQ
Sbjct:   552 EYVHRVGRTGRAGKMGESVTLMTQDDWKVAGELIEIL----QRANQSIPEDLL-SMAEQ 605


>UNIPROTKB|G5E631 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
            signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
            of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
            "intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
            "cellular response to osmotic stress" evidence=IEA] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=IEA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
            "positive regulation of translational initiation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
            response" evidence=IEA] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043024 "ribosomal small subunit
            binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
            evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
            "negative regulation of protein complex assembly" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=IEA]
            [GO:0030307 "positive regulation of cell growth" evidence=IEA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
            "response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
            signaling pathway via death domain receptors" evidence=IEA]
            [GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IEA] [GO:0007059
            "chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
            OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
            PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
            KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
        Length = 661

 Score = 269 (99.8 bits), Expect = 2.0e-22, P = 2.0e-22
 Identities = 62/154 (40%), Positives = 86/154 (55%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +VG+  E + + +    +    + KR+ L DL+    K   T+VF +TK+ AD +   L 
Sbjct:   406 RVGSTSENITQKV----VWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLY 461

Query:    73 SI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D 
Sbjct:   462 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDI 521

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             E +VHR GRTGR G  G A   F        + L
Sbjct:   522 EEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 555


>UNIPROTKB|J9P0V9 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
            RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
            KEGG:cfa:480886 Uniprot:J9P0V9
        Length = 662

 Score = 269 (99.8 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 62/154 (40%), Positives = 86/154 (55%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +VG+  E + + +    +    + KR+ L DL+    K   T+VF +TK+ AD +   L 
Sbjct:   407 RVGSTSENITQKV----VWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLY 462

Query:    73 SI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D 
Sbjct:   463 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDI 522

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             E +VHR GRTGR G  G A   F        + L
Sbjct:   523 EEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 556


>UNIPROTKB|O00571 [details] [associations]
            symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
            "mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
            speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
            regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IDA] [GO:1900087
            "positive regulation of G1/S transition of mitotic cell cycle"
            evidence=IMP] [GO:0045948 "positive regulation of translational
            initiation" evidence=IMP] [GO:0031333 "negative regulation of
            protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
            initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
            regulation of translation" evidence=IMP] [GO:0034063 "stress
            granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
            stress" evidence=IDA] [GO:0071243 "cellular response to
            arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
            regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
            [GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
            "cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
            "positive regulation of translation" evidence=IDA] [GO:0008143
            "poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
            initiation factor binding" evidence=IDA] [GO:0042256 "mature
            ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
            subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
            evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
            "ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
            helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=IDA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0009615 "response to virus" evidence=IDA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IDA] [GO:0032728
            "positive regulation of interferon-beta production" evidence=TAS]
            [GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
            "positive regulation of chemokine (C-C motif) ligand 5 production"
            evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
            "transcription factor binding" evidence=IDA] [GO:0030308 "negative
            regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
            apoptotic signaling pathway via death domain receptors"
            evidence=IMP] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IMP] [GO:0043154 "negative regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
            evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IMP]
            [GO:0043065 "positive regulation of apoptotic process"
            evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0006200 "ATP catabolic process" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
            GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
            GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
            GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
            GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
            GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
            GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
            GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
            GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
            KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
            EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
            EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
            IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
            UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
            PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
            DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
            PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
            SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
            Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
            KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
            HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
            neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
            OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
            ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
            GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
            CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
            GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
            GO:GO:0032728 Uniprot:O00571
        Length = 662

 Score = 269 (99.8 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 62/154 (40%), Positives = 86/154 (55%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +VG+  E + + +    +    + KR+ L DL+    K   T+VF +TK+ AD +   L 
Sbjct:   407 RVGSTSENITQKV----VWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLY 462

Query:    73 SI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D 
Sbjct:   463 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDI 522

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             E +VHR GRTGR G  G A   F        + L
Sbjct:   523 EEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 556


>UNIPROTKB|Q48AV0 [details] [associations]
            symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
            GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
            BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
        Length = 420

 Score = 266 (98.7 bits), Expect = 4.2e-22, P = 4.2e-22
 Identities = 59/153 (38%), Positives = 94/153 (61%)

Query:    16 NQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTI-VFTQTKRDADEVSLALTSI 74
             ++  K A+ ++       A  KR + S LI   ++  K + VFT+TK+ AD+++  +T  
Sbjct:   212 DEKNKAADDVEQLVYGVDADRKRELTSFLIG--SRNWKQVLVFTRTKQCADDLAKEMTKD 269

Query:    75 -IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 133
              + S A+HGD SQ  RE+ L+ F++GK   L+ATDVAARG+DI  +  +I+YELP + E 
Sbjct:   270 GVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAARGIDIKGLSHVINYELPYNAED 329

Query:   134 FVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 166
             +VHR GRT RAG  G A+ + +  +   + ++E
Sbjct:   330 YVHRIGRTARAGNSGLAVSLVSPGEEWLLTAIE 362


>UNIPROTKB|Q83DM8 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase" species:227377
            "Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
            RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
            KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
            BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
        Length = 420

 Score = 266 (98.7 bits), Expect = 4.2e-22, P = 4.2e-22
 Identities = 61/133 (45%), Positives = 88/133 (66%)

Query:    37 KRTILSDLITVYAKGGKTI-VFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLN 94
             KR +LS +I   +K  + + VFT+TK  A+ +S  L S  ++S A+HG+ SQ  R R L 
Sbjct:   243 KRELLSFMIG--SKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALT 300

Query:    95 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 154
              F+QGK  VLVATDVAARGLDI  +  +I++ELP+  + +VHR GRTGRA  +G AI + 
Sbjct:   301 QFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLV 360

Query:   155 TSSQRRTVRSLER 167
             +  + R +R +E+
Sbjct:   361 SGDEVRLLRDIEK 373


>TIGR_CMR|CBU_0670 [details] [associations]
            symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
            putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
            GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
            ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
            Uniprot:Q83DM8
        Length = 420

 Score = 266 (98.7 bits), Expect = 4.2e-22, P = 4.2e-22
 Identities = 61/133 (45%), Positives = 88/133 (66%)

Query:    37 KRTILSDLITVYAKGGKTI-VFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLN 94
             KR +LS +I   +K  + + VFT+TK  A+ +S  L S  ++S A+HG+ SQ  R R L 
Sbjct:   243 KRELLSFMIG--SKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALT 300

Query:    95 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 154
              F+QGK  VLVATDVAARGLDI  +  +I++ELP+  + +VHR GRTGRA  +G AI + 
Sbjct:   301 QFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLV 360

Query:   155 TSSQRRTVRSLER 167
             +  + R +R +E+
Sbjct:   361 SGDEVRLLRDIEK 373


>TIGR_CMR|CPS_0042 [details] [associations]
            symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
            GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
            BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
        Length = 420

 Score = 266 (98.7 bits), Expect = 4.2e-22, P = 4.2e-22
 Identities = 59/153 (38%), Positives = 94/153 (61%)

Query:    16 NQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTI-VFTQTKRDADEVSLALTSI 74
             ++  K A+ ++       A  KR + S LI   ++  K + VFT+TK+ AD+++  +T  
Sbjct:   212 DEKNKAADDVEQLVYGVDADRKRELTSFLIG--SRNWKQVLVFTRTKQCADDLAKEMTKD 269

Query:    75 -IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 133
              + S A+HGD SQ  RE+ L+ F++GK   L+ATDVAARG+DI  +  +I+YELP + E 
Sbjct:   270 GVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAARGIDIKGLSHVINYELPYNAED 329

Query:   134 FVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 166
             +VHR GRT RAG  G A+ + +  +   + ++E
Sbjct:   330 YVHRIGRTARAGNSGLAVSLVSPGEEWLLTAIE 362


>UNIPROTKB|A4QVP2 [details] [associations]
            symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
            RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
            EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
            Uniprot:A4QVP2
        Length = 396

 Score = 263 (97.6 bits), Expect = 1.0e-21, P = 1.0e-21
 Identities = 64/172 (37%), Positives = 98/172 (56%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLI-TVYAKGGKTIVFTQTKRDADEVSLALTSI 74
             +DE   EGIK + I+      K   LSDL  TV     + ++F  T+R  D ++  LT+ 
Sbjct:   228 KDELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTIT--QAVIFCNTRRKVDWLTDKLTAR 285

Query:    75 -IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 133
                  A+HGD+ Q QR+  +  FR G   VL+ATD+ ARG+D+  V L+I+Y+LP + E 
Sbjct:   286 DFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANREN 345

Query:   134 FVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             ++HR GR GR G++G AI   T+   R +R +E+    + E + P  V D++
Sbjct:   346 YIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEM-PMNVADLI 396


>MGI|MGI:1349406 [details] [associations]
            symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
            Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
            CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
            RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
            SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
            PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
            InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
            GermOnline:ENSMUSG00000069045 Uniprot:Q62095
        Length = 658

 Score = 267 (99.0 bits), Expect = 1.3e-21, P = 1.3e-21
 Identities = 60/154 (38%), Positives = 85/154 (55%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEV-SLAL 71
             +VG+  E + + +    +      KR+ L DL+    K   T+VF +TK+ AD + +   
Sbjct:   406 RVGSTSENITQKV----VWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADSLENFLF 461

Query:    72 TSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR G+  +LVAT VAARGLDI NV  +I+++LP+D 
Sbjct:   462 QERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVINFDLPSDI 521

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             E +VHR GRTGR G  G A   F        + L
Sbjct:   522 EEYVHRIGRTGRVGNLGLATSFFNERNLNITKDL 555


>MGI|MGI:103064 [details] [associations]
            symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
            X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
            "RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
            "mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
            catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
            of translation" evidence=IEA] [GO:0006915 "apoptotic process"
            evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
            [GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=ISO]
            [GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
            initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
            apoptotic signaling pathway via death domain receptors"
            evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
            "RNA secondary structure unwinding" evidence=ISO] [GO:0016020
            "membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
            [GO:0017148 "negative regulation of translation" evidence=ISO]
            [GO:0030307 "positive regulation of cell growth" evidence=ISO]
            [GO:0030308 "negative regulation of cell growth" evidence=ISO]
            [GO:0031333 "negative regulation of protein complex assembly"
            evidence=ISO] [GO:0031369 "translation initiation factor binding"
            evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
            [GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
            "ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
            assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
            binding" evidence=ISO] [GO:0043065 "positive regulation of
            apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
            of apoptotic process" evidence=ISO] [GO:0043154 "negative
            regulation of cysteine-type endopeptidase activity involved in
            apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
            of cysteine-type endopeptidase activity involved in apoptotic
            process" evidence=ISO] [GO:0045087 "innate immune response"
            evidence=ISO] [GO:0045727 "positive regulation of translation"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0045948
            "positive regulation of translational initiation" evidence=ISO]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=ISO]
            [GO:0071470 "cellular response to osmotic stress" evidence=ISO]
            [GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
            [GO:1900087 "positive regulation of G1/S transition of mitotic cell
            cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
            apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
            GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
            GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
            GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
            GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
            GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
            GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
            GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
            GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
            HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
            GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
            IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
            ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
            MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
            REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
            Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
            InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
            Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
        Length = 662

 Score = 267 (99.0 bits), Expect = 1.4e-21, P = 1.4e-21
 Identities = 62/154 (40%), Positives = 85/154 (55%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +VG+  E + + +    +      KR+ L DL+    K   T+VF +TK+ AD +   L 
Sbjct:   407 RVGSTSENITQKV----VWVEEIDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLY 462

Query:    73 SI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D 
Sbjct:   463 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDI 522

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             E +VHR GRTGR G  G A   F        + L
Sbjct:   523 EEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 556


>RGD|1564771 [details] [associations]
            symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
            X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
            PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
            Uniprot:D4ADE8
        Length = 662

 Score = 267 (99.0 bits), Expect = 1.4e-21, P = 1.4e-21
 Identities = 62/154 (40%), Positives = 85/154 (55%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +VG+  E + + +    +      KR+ L DL+    K   T+VF +TK+ AD +   L 
Sbjct:   407 RVGSTSENITQKV----VWVEEIDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLY 462

Query:    73 SI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D 
Sbjct:   463 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDI 522

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             E +VHR GRTGR G  G A   F        + L
Sbjct:   523 EEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 556


>POMBASE|SPBP8B7.16c [details] [associations]
            symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
            species:4896 "Schizosaccharomyces pombe" [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
            GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
            EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
            EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
            ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
            EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
            NextBio:20802492 Uniprot:P24782
        Length = 550

 Score = 266 (98.7 bits), Expect = 1.4e-21, P = 1.4e-21
 Identities = 59/155 (38%), Positives = 90/155 (58%)

Query:    14 VGNQDEKLAEGIK-LYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLAL 71
             VG+ D   +  IK +  +   A  +  +  D+  V   +  K ++FT TKR AD+++  L
Sbjct:   330 VGSLDLAASHNIKQIVEVVDNADKRARLGKDIEEVLKDRDNKVLIFTGTKRVADDITRFL 389

Query:    72 TSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPND 130
                   + A+HGD +Q +R+  LN FR GK  ++VATDVA+RG+D+  +  + +Y+ P +
Sbjct:   390 RQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFNYDFPGN 449

Query:   131 PETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
              E +VHR GRTGRAG +GTA   FTS   +  R L
Sbjct:   450 TEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQAREL 484


>UNIPROTKB|Q8EBV7 [details] [associations]
            symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
            KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
            Uniprot:Q8EBV7
        Length = 409

 Score = 263 (97.6 bits), Expect = 1.4e-21, P = 1.4e-21
 Identities = 56/142 (39%), Positives = 88/142 (61%)

Query:    26 KLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDI 84
             ++YAI +    K   +S L+       + ++F++TK+  D+++  L  + +A+++ HGD+
Sbjct:   223 RVYAIDSDR--KTEFVSHLVRS-KNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDL 279

Query:    85 SQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRA 144
             SQ  RE+ L  F+QG   VLVATDVAARGLDI  +  +I++ELP   E ++HR GRTGRA
Sbjct:   280 SQGAREKVLQEFKQGLVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRA 339

Query:   145 GKEGTAILMFTSSQRRTVRSLE 166
             G  G AI +F+      +  +E
Sbjct:   340 GSAGLAITLFSQEDALLLEEVE 361


>TIGR_CMR|SO_3388 [details] [associations]
            symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
            KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
            Uniprot:Q8EBV7
        Length = 409

 Score = 263 (97.6 bits), Expect = 1.4e-21, P = 1.4e-21
 Identities = 56/142 (39%), Positives = 88/142 (61%)

Query:    26 KLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDI 84
             ++YAI +    K   +S L+       + ++F++TK+  D+++  L  + +A+++ HGD+
Sbjct:   223 RVYAIDSDR--KTEFVSHLVRS-KNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDL 279

Query:    85 SQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRA 144
             SQ  RE+ L  F+QG   VLVATDVAARGLDI  +  +I++ELP   E ++HR GRTGRA
Sbjct:   280 SQGAREKVLQEFKQGLVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRA 339

Query:   145 GKEGTAILMFTSSQRRTVRSLE 166
             G  G AI +F+      +  +E
Sbjct:   340 GSAGLAITLFSQEDALLLEEVE 361


>ZFIN|ZDB-GENE-980526-150 [details] [associations]
            symbol:pl10 "pl10" species:7955 "Danio rerio"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
            EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
            ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
            CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
            Uniprot:Q6PBB2
        Length = 688

 Score = 267 (99.0 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 61/154 (39%), Positives = 85/154 (55%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLAL- 71
             +VG+  E + + +    +      KR+ L DL+    K   T+VF +TK+ AD +   L 
Sbjct:   439 RVGSTSENITQKV----VWVEENDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLY 494

Query:    72 TSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR G+  +LVAT VAARGLDI NV  +I+++LP+D 
Sbjct:   495 REGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAARGLDISNVKHVINFDLPSDI 554

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             E +VHR GRTGR G  G A   F        + L
Sbjct:   555 EEYVHRIGRTGRVGNLGLATSFFNDKNGNITKDL 588


>UNIPROTKB|I3LRT7 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
            GeneTree:ENSGT00620000087942 EMBL:CU929824
            Ensembl:ENSSSCT00000031627 OMA:VGDERTM Uniprot:I3LRT7
        Length = 290

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 57/131 (43%), Positives = 80/131 (61%)

Query:    36 SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLN 94
             SKR  L +++       +T+VF +TK+ AD ++  L    I++ ++HGD  Q +RE+ L 
Sbjct:    93 SKREKLVEILRNIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALG 151

Query:    95 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 154
              FR GK  VLVAT VAARGLDI NV  +I+++LP+  + +VHR GRTGR G  G AI  F
Sbjct:   152 DFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFF 211

Query:   155 TSSQRRTVRSL 165
               S     + L
Sbjct:   212 DESDSHLAQPL 222


>UNIPROTKB|F1NIX2 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
            Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
        Length = 636

 Score = 266 (98.7 bits), Expect = 2.0e-21, P = 2.0e-21
 Identities = 62/154 (40%), Positives = 85/154 (55%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +VG+  E + + +    +      KR+ L DL+    K   T+VF +TK+ AD +   L 
Sbjct:   384 RVGSTSENITQKV----VWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLY 439

Query:    73 SI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D 
Sbjct:   440 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDI 499

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             E +VHR GRTGR G  G A   F        + L
Sbjct:   500 EEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 533


>UNIPROTKB|F1NIX1 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
            IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
            Uniprot:F1NIX1
        Length = 638

 Score = 266 (98.7 bits), Expect = 2.0e-21, P = 2.0e-21
 Identities = 62/154 (40%), Positives = 85/154 (55%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +VG+  E + + +    +      KR+ L DL+    K   T+VF +TK+ AD +   L 
Sbjct:   385 RVGSTSENITQKV----VWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLY 440

Query:    73 SI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D 
Sbjct:   441 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDI 500

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             E +VHR GRTGR G  G A   F        + L
Sbjct:   501 EEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 534


>TIGR_CMR|GSU_0491 [details] [associations]
            symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
            RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
            KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
            BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
        Length = 450

 Score = 263 (97.6 bits), Expect = 2.5e-21, P = 2.5e-21
 Identities = 57/135 (42%), Positives = 87/135 (64%)

Query:    37 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNG 95
             K  +L  LIT  +   + I+F+ TKRDA+ ++L L +   ++ ALHGD+ Q+ R RT+  
Sbjct:   231 KNRLLRHLITDESLR-RAIIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNRTIAA 289

Query:    96 FRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 155
              +QG+  +LVATDVAARGLD+  +  +I+++LP   E +VHR GRTGRAG  G AI   +
Sbjct:   290 MKQGRIRLLVATDVAARGLDVTGISHVINFDLPKFAEDYVHRIGRTGRAGASGIAISFAS 349

Query:   156 SSQRRTVRSLERDVG 170
              ++   +  +ER +G
Sbjct:   350 LNEVNYLARIERYIG 364


>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
            symbol:PFL1310c "ATP-dependent RNA helicase,
            putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
            metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
            HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
            ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
            EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
            EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
            Uniprot:Q8I5E7
        Length = 742

 Score = 265 (98.3 bits), Expect = 4.2e-21, P = 4.2e-21
 Identities = 53/144 (36%), Positives = 88/144 (61%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             Q+G  +    + I+   I +++   +  L D +    +  K ++F  TKR+ D +   L 
Sbjct:   562 QIGKNELTANKNIEQNVIISSSIDMKKKLLDWLKENYENNKILIFCDTKRNCDNLCKELR 621

Query:    73 -SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                  + ++HGD  Q +R+R LN ++  +  +LVATDVA+RGLDI N+ ++I+Y++PN  
Sbjct:   622 YHQYNALSIHGDKQQRERDRILNNYKTDRCNILVATDVASRGLDIKNISVVINYDIPNTI 681

Query:   132 ETFVHRSGRTGRAGKEGTAILMFT 155
             E ++HR GRTGRAGK+G +IL F+
Sbjct:   682 EDYIHRIGRTGRAGKKGKSILFFS 705


>TAIR|locus:2076436 [details] [associations]
            symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
            EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
            RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
            SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
            EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
            GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
            ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
            Uniprot:Q9M2F9
        Length = 646

 Score = 264 (98.0 bits), Expect = 5.4e-21, P = 5.4e-21
 Identities = 58/139 (41%), Positives = 83/139 (59%)

Query:    35 TSKRTILSDLITVYAKGGK------TIVFTQTKRDADEVS--LALTSIIASEALHGDISQ 86
             + KR+ L DL+    + G       T+VF +TK+ AD +   L +    A+  +HGD SQ
Sbjct:   383 SDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPAT-TIHGDRSQ 441

Query:    87 HQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK 146
              +RE  L  F+ G+  +LVATDVAARGLDIP+V  +++++LPND + +VHR GRTGRAG 
Sbjct:   442 QEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGN 501

Query:   147 EGTAILMFTSSQRRTVRSL 165
              G A   F  +     + L
Sbjct:   502 SGLATAFFNDNNTTMAKPL 520


>RGD|2314437 [details] [associations]
            symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
            species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
            evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
            EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
            UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
            GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
        Length = 652

 Score = 264 (98.0 bits), Expect = 5.5e-21, P = 5.5e-21
 Identities = 59/154 (38%), Positives = 85/154 (55%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEV-SLAL 71
             +VG+  E + + +    +      KR+ L DL+    +   T+VF +TK+ AD + +   
Sbjct:   400 RVGSTSENITQKV----VWVEELDKRSFLLDLLNATGRDSLTLVFVETKKGADSLENFLF 455

Query:    72 TSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR G+  +LVAT VAARGLDI NV  +I+++LP+D 
Sbjct:   456 QERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVINFDLPSDI 515

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             E +VHR GRTGR G  G A   F        + L
Sbjct:   516 EEYVHRIGRTGRVGNLGLATSFFNERNLNITKDL 549


>UNIPROTKB|I3LDV0 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
            Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
        Length = 667

 Score = 264 (98.0 bits), Expect = 5.8e-21, P = 5.8e-21
 Identities = 62/158 (39%), Positives = 91/158 (57%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +VG+  E + + +    +    + KR+ L DL+    K   T+VF +TK+ AD +   L 
Sbjct:   408 RVGSTSENITQKV----VWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLY 463

Query:    73 SI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D 
Sbjct:   464 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDI 523

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDV 169
             E +VHR GRTGR G  G   L  +    R + ++ +D+
Sbjct:   524 EEYVHRIGRTGRVGNLGLIGLATSFFNERNI-NITKDL 560


>UNIPROTKB|P25888 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase" species:83333
            "Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
            GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
            PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
            ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
            MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
            EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
            KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
            EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
            BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
            Genevestigator:P25888 Uniprot:P25888
        Length = 454

 Score = 261 (96.9 bits), Expect = 5.8e-21, P = 5.8e-21
 Identities = 59/134 (44%), Positives = 83/134 (61%)

Query:    37 KRTILSDLITVYAKGG--KTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTL 93
             KR +LS +I    KG   + +VFT+TK  A+ ++  L    I S A+HG+ SQ  R R L
Sbjct:   232 KRELLSHMI---GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRAL 288

Query:    94 NGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILM 153
               F+ G   VLVATD+AARGLDI  +  +++YELPN PE +VHR GRTGRA   G A+ +
Sbjct:   289 ADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSL 348

Query:   154 FTSSQRRTVRSLER 167
                 + + +R +E+
Sbjct:   349 VCVDEHKLLRDIEK 362


>UNIPROTKB|B4E132 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
            sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
            HOGENOM:HOG000268804 HOVERGEN:HBG015893 UniGene:Hs.99120
            HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK303638 IPI:IPI00908506
            ProteinModelPortal:B4E132 SMR:B4E132 STRING:B4E132
            Ensembl:ENST00000420730 Uniprot:B4E132
        Length = 407

 Score = 259 (96.2 bits), Expect = 6.1e-21, P = 6.1e-21
 Identities = 60/154 (38%), Positives = 84/154 (54%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +VG+  E + + +    +      KR+ L D++        T+VF +TK+ AD +   L 
Sbjct:   152 RVGSTSENITQKV----VWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLY 207

Query:    73 SI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D 
Sbjct:   208 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDI 267

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             E +VHR GRTGR G  G A   F        + L
Sbjct:   268 EEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDL 301


>UNIPROTKB|Q2NL22 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045727 "positive regulation of translation"
            evidence=IEA] [GO:0035145 "exon-exon junction complex"
            evidence=IEA] [GO:0017148 "negative regulation of translation"
            evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
            GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
            GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
            GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
            IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
            ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
            Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
            InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
            Uniprot:Q2NL22
        Length = 411

 Score = 259 (96.2 bits), Expect = 6.5e-21, P = 6.5e-21
 Identities = 60/171 (35%), Positives = 95/171 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             +DE   EGIK + ++      K   L DL        + ++F  TKR  D ++  +    
Sbjct:   243 RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREAN 301

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ++HGD+ Q +RE  +  FR G   VL++TDV ARGLD+P V LII+Y+LPN+ E +
Sbjct:   302 FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY 361

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR+GR G++G AI    +   R +R +E+    + + + P  V D++
Sbjct:   362 IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM-PMNVADLI 411


>UNIPROTKB|E2RDZ4 [details] [associations]
            symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045727 "positive regulation of translation" evidence=IEA]
            [GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
            "negative regulation of translation" evidence=IEA] [GO:0008143
            "poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
            GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
            EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
            GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
        Length = 411

 Score = 259 (96.2 bits), Expect = 6.5e-21, P = 6.5e-21
 Identities = 60/171 (35%), Positives = 95/171 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             +DE   EGIK + ++      K   L DL        + ++F  TKR  D ++  +    
Sbjct:   243 RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREAN 301

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ++HGD+ Q +RE  +  FR G   VL++TDV ARGLD+P V LII+Y+LPN+ E +
Sbjct:   302 FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY 361

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR+GR G++G AI    +   R +R +E+    + + + P  V D++
Sbjct:   362 IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM-PMNVADLI 411


>UNIPROTKB|P38919 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0048026 "positive
            regulation of mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
            step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
            of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
            evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
            "poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
            regulation of translation" evidence=IDA] [GO:0000288
            "nuclear-transcribed mRNA catabolic process,
            deadenylation-dependent decay" evidence=TAS] [GO:0000289
            "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
            evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
            [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
            "cytokine-mediated signaling pathway" evidence=TAS]
            Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
            GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
            GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
            GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
            PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
            PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
            OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
            EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
            EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
            UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
            SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
            STRING:P38919 PhosphoSite:P38919 DMDM:20532400
            REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
            PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
            KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
            HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
            InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
            EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
            CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
            Uniprot:P38919
        Length = 411

 Score = 259 (96.2 bits), Expect = 6.5e-21, P = 6.5e-21
 Identities = 60/171 (35%), Positives = 95/171 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             +DE   EGIK + ++      K   L DL        + ++F  TKR  D ++  +    
Sbjct:   243 RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREAN 301

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ++HGD+ Q +RE  +  FR G   VL++TDV ARGLD+P V LII+Y+LPN+ E +
Sbjct:   302 FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY 361

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR+GR G++G AI    +   R +R +E+    + + + P  V D++
Sbjct:   362 IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM-PMNVADLI 411


>UNIPROTKB|A6M931 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
            "regulation of translation" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
            GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
            GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
            OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
            UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
            GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
        Length = 411

 Score = 259 (96.2 bits), Expect = 6.5e-21, P = 6.5e-21
 Identities = 60/171 (35%), Positives = 95/171 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             +DE   EGIK + ++      K   L DL        + ++F  TKR  D ++  +    
Sbjct:   243 RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREAN 301

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ++HGD+ Q +RE  +  FR G   VL++TDV ARGLD+P V LII+Y+LPN+ E +
Sbjct:   302 FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY 361

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR+GR G++G AI    +   R +R +E+    + + + P  V D++
Sbjct:   362 IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM-PMNVADLI 411


>UNIPROTKB|F1RZ83 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
            translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
            evidence=IEA] [GO:0017148 "negative regulation of translation"
            evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
            EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
            Uniprot:F1RZ83
        Length = 411

 Score = 259 (96.2 bits), Expect = 6.5e-21, P = 6.5e-21
 Identities = 60/171 (35%), Positives = 95/171 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             +DE   EGIK + ++      K   L DL        + ++F  TKR  D ++  +    
Sbjct:   243 RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREAN 301

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ++HGD+ Q +RE  +  FR G   VL++TDV ARGLD+P V LII+Y+LPN+ E +
Sbjct:   302 FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY 361

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR+GR G++G AI    +   R +R +E+    + + + P  V D++
Sbjct:   362 IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM-PMNVADLI 411


>RGD|1591139 [details] [associations]
            symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
            isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
            "positive regulation of translation" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
            transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
            GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
            EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
            IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
            ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
            KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
        Length = 411

 Score = 259 (96.2 bits), Expect = 6.5e-21, P = 6.5e-21
 Identities = 60/171 (35%), Positives = 95/171 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             +DE   EGIK + ++      K   L DL        + ++F  TKR  D ++  +    
Sbjct:   243 RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREAN 301

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ++HGD+ Q +RE  +  FR G   VL++TDV ARGLD+P V LII+Y+LPN+ E +
Sbjct:   302 FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY 361

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR+GR G++G AI    +   R +R +E+    + + + P  V D++
Sbjct:   362 IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM-PMNVADLI 411


>UNIPROTKB|Q5ZM36 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
            catabolic process, nonsense-mediated decay" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
            "RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
            "nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
            GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
            OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
            RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
            SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
            InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
        Length = 412

 Score = 259 (96.2 bits), Expect = 6.7e-21, P = 6.7e-21
 Identities = 60/171 (35%), Positives = 95/171 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             +DE   EGIK + ++      K   L DL        + ++F  TKR  D ++  +    
Sbjct:   244 RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREAN 302

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ++HGD+ Q +RE  +  FR G   VL++TDV ARGLD+P V LII+Y+LPN+ E +
Sbjct:   303 FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY 362

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR+GR G++G AI    +   R +R +E+    + + + P  V D++
Sbjct:   363 IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM-PMNVADLI 412


>TAIR|locus:2008296 [details] [associations]
            symbol:AT1G51380 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009560
            "embryo sac egg cell differentiation" evidence=RCA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005730 EMBL:AC024261
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 EMBL:AC006085 KO:K13025
            EMBL:AY058890 EMBL:AY079046 IPI:IPI00529522 PIR:H96551
            RefSeq:NP_175549.1 UniGene:At.11244 ProteinModelPortal:Q9C8J1
            SMR:Q9C8J1 PaxDb:Q9C8J1 PRIDE:Q9C8J1 EnsemblPlants:AT1G51380.1
            GeneID:841562 KEGG:ath:AT1G51380 GeneFarm:1010 TAIR:At1g51380
            InParanoid:Q9C8J1 OMA:DITNITH PhylomeDB:Q9C8J1
            ProtClustDB:CLSN2912843 Genevestigator:Q9C8J1 GermOnline:AT1G51380
            Uniprot:Q9C8J1
        Length = 392

 Score = 258 (95.9 bits), Expect = 6.8e-21, P = 6.8e-21
 Identities = 61/161 (37%), Positives = 92/161 (57%)

Query:    18 DEKLAEGIKLYAISTTATS-KRTILSDL---ITVYAKGGKTIVFTQTKRDADEVSLALTS 73
             DE   EGIK Y +       K   L DL   +T+     + I+F  T++  D ++  + S
Sbjct:   228 DELTLEGIKQYYVDVDKEEWKFDTLCDLYGRLTI----NQAIIFCNTRQKVDWLTEKMRS 283

Query:    74 --IIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                I S ++HGD  Q +R+  +N FR  K  VL+A+DV ARG+D+  V  +I+Y++PN+P
Sbjct:   284 SNFIVS-SMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNP 342

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCK 172
             E ++HR GR GR G+EG AI    SS  + ++ +ER  G K
Sbjct:   343 ELYIHRIGRAGRFGREGVAINFVKSSDMKDLKDIERHYGTK 383


>TIGR_CMR|SO_3783 [details] [associations]
            symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
            RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
            KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
            Uniprot:Q8EAV8
        Length = 535

 Score = 262 (97.3 bits), Expect = 6.8e-21, P = 6.8e-21
 Identities = 56/147 (38%), Positives = 90/147 (61%)

Query:    22 AEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEAL 80
             A  +K +      T K  +L  LI       + +VF++TK  A+ ++ +L    I++ A+
Sbjct:   215 ATTVKQWICPVDKTQKSALLIQLIK-QENWQQVLVFSRTKHGANRLAKSLIQAEISAAAI 273

Query:    81 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 140
             HG+ SQ  R + L  F+ G+  VLVATD+AARGLDI  +  +++++LPN PE +VHR GR
Sbjct:   274 HGNKSQGARTKALADFKSGEVRVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGR 333

Query:   141 TGRAGKEGTAILMFTSSQRRTVRSLER 167
             TGRAG  G A+ + +S + + ++ +ER
Sbjct:   334 TGRAGATGQAVSLVSSEEIKLLKDIER 360


>UNIPROTKB|F1NTS2 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
            evidence=IEA] [GO:0017148 "negative regulation of translation"
            evidence=IEA] [GO:0035145 "exon-exon junction complex"
            evidence=IEA] [GO:0045727 "positive regulation of translation"
            evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
            GeneTree:ENSGT00530000062880 IPI:IPI00588271 EMBL:AADN02041229
            EMBL:AADN02041230 ProteinModelPortal:F1NTS2
            Ensembl:ENSGALT00000038969 OMA:KTRNGVD ArrayExpress:F1NTS2
            Uniprot:F1NTS2
        Length = 414

 Score = 259 (96.2 bits), Expect = 6.9e-21, P = 6.9e-21
 Identities = 60/171 (35%), Positives = 95/171 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             +DE   EGIK + ++      K   L DL        + ++F  TKR  D ++  +    
Sbjct:   246 RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREAN 304

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ++HGD+ Q +RE  +  FR G   VL++TDV ARGLD+P V LII+Y+LPN+ E +
Sbjct:   305 FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY 364

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR+GR G++G AI    +   R +R +E+    + + + P  V D++
Sbjct:   365 IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM-PMNVADLI 414


>WB|WBGene00012059 [details] [associations]
            symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
            evidence=IMP] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
            development" evidence=IMP] [GO:0006915 "apoptotic process"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
            GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
            OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
            ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
            EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
            UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
            NextBio:892086 Uniprot:P34580
        Length = 489

 Score = 256 (95.2 bits), Expect = 7.5e-21, Sum P(2) = 7.5e-21
 Identities = 57/156 (36%), Positives = 90/156 (57%)

Query:    20 KLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASE 78
             K  + +K + I      K T L  L+  +A G   IVF  T     ++++ L  + + + 
Sbjct:   253 KTVDNLKQHYIFVPNKYKETYLVYLLNEHA-GNSAIVFCATCATTMQIAVMLRQLGMQAV 311

Query:    79 ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRS 138
              LHG +SQ +R  +LN F+     +LV TDVAARGLDIP+VD++I+Y++P+  + +VHR 
Sbjct:   312 PLHGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRV 371

Query:   139 GRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFE 174
             GRT RAG+ G AI + T       + +E ++G K +
Sbjct:   372 GRTARAGRSGIAITVVTQYDVEAYQKIEANLGKKLD 407

 Score = 39 (18.8 bits), Expect = 7.5e-21, Sum P(2) = 7.5e-21
 Identities = 9/17 (52%), Positives = 10/17 (58%)

Query:    13 QVGNQDEKLAEGIKLYA 29
             Q+G Q E L  GI L A
Sbjct:   127 QIGQQFEALGSGIGLIA 143


>UNIPROTKB|E1BSE5 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:AADN02041229
            EMBL:AADN02041230 IPI:IPI00819993 Ensembl:ENSGALT00000013903
            ArrayExpress:E1BSE5 Uniprot:E1BSE5
        Length = 402

 Score = 258 (95.9 bits), Expect = 8.4e-21, P = 8.4e-21
 Identities = 57/153 (37%), Positives = 87/153 (56%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             +DE   EGIK + ++      K   L DL        + ++F  TKR  D ++  +    
Sbjct:   239 RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREAN 297

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ++HGD+ Q +RE  +  FR G   VL++TDV ARGLD+P V LII+Y+LPN+ E +
Sbjct:   298 FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY 357

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLER 167
             +HR GR+GR G++G AI    +   R +R +E+
Sbjct:   358 IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQ 390


>TAIR|locus:2035741 [details] [associations]
            symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
            IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
            UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
            PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
            KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
            OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
            Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
        Length = 501

 Score = 261 (96.9 bits), Expect = 8.6e-21, P = 8.6e-21
 Identities = 61/175 (34%), Positives = 94/175 (53%)

Query:     5 FVMFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDA 64
             F+   +   +G+ D K    I+      + + K   L  L+     G + +VF  TK+  
Sbjct:   298 FLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGC 357

Query:    65 DEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLII 123
             D+++  L      + ++HGD SQ +R+  L+ FR GK  ++ ATDVAARGLD+ +V  +I
Sbjct:   358 DQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVI 417

Query:   124 HYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSP 178
             +Y+ P   E +VHR GRTGRAG +GTA   FT +  R  + L   +    + VSP
Sbjct:   418 NYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQKVSP 472


>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
            symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
            RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
            Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
            OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
        Length = 709

 Score = 263 (97.6 bits), Expect = 9.5e-21, P = 9.5e-21
 Identities = 59/154 (38%), Positives = 85/154 (55%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLAL- 71
             +VG+  E + + +    +      KR+ L DL+    K   T+VF +TK+ AD +   L 
Sbjct:   455 RVGSTSENITQKV----VWVEENDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLY 510

Query:    72 TSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR G+  ++VAT VAARGLDI NV  +I+++LP+D 
Sbjct:   511 REGYACTSIHGDRSQRDREEALHQFRSGRCPIMVATAVAARGLDISNVKHVINFDLPSDI 570

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             E +VHR GRTGR G  G A   +        + L
Sbjct:   571 EEYVHRIGRTGRVGNLGLATSFYNDKNSNITKDL 604


>TIGR_CMR|CPS_2658 [details] [associations]
            symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
            ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
            PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
            Uniprot:Q480Z7
        Length = 399

 Score = 257 (95.5 bits), Expect = 1.1e-20, P = 1.1e-20
 Identities = 55/137 (40%), Positives = 81/137 (59%)

Query:    35 TSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTL 93
             ++K  +L +++T  A   K ++F +TK  AD +  AL    I + +LH   +Q  RE  L
Sbjct:   230 SNKVPLLFNILTK-ADYEKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEAL 288

Query:    94 NGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILM 153
               F+     VLVATDVAARG+D+ N+ L+I+Y LP DP  ++HR GRT RAGK G AI  
Sbjct:   289 QNFKDSTLRVLVATDVAARGIDVDNITLVINYNLPEDPRNYIHRIGRTARAGKSGMAISF 348

Query:   154 FTSSQRRTVRSLERDVG 170
                +  R + ++E  +G
Sbjct:   349 AVENDIRQLTNIENSIG 365


>RGD|1309586 [details] [associations]
            symbol:RGD1309586 "similar to probable ATP-dependent RNA
            helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
            OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
            RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
            GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
            NextBio:684798 Uniprot:D3ZN21
        Length = 659

 Score = 262 (97.3 bits), Expect = 1.2e-20, P = 1.2e-20
 Identities = 61/154 (39%), Positives = 84/154 (54%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +VG+  E + + +    +      KR+ L DL+    K    +VF +TK+ AD +   L 
Sbjct:   405 RVGSTSENITQKV----VWVEEADKRSFLLDLLNATGKDSLILVFVETKKGADSLEDFLY 460

Query:    73 SI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D 
Sbjct:   461 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDI 520

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             E +VHR GRTGR G  G A   F        + L
Sbjct:   521 EEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 554


>MGI|MGI:91842 [details] [associations]
            symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
            GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
            GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
            KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
            IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
            ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
            PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
            Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
            InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
            Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
            GermOnline:ENSMUSG00000039224 Uniprot:P16381
        Length = 660

 Score = 262 (97.3 bits), Expect = 1.2e-20, P = 1.2e-20
 Identities = 61/154 (39%), Positives = 84/154 (54%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +VG+  E + + +    +      KR+ L DL+    K    +VF +TK+ AD +   L 
Sbjct:   406 RVGSTSENITQKV----VWVEEADKRSFLLDLLNATGKDSLILVFVETKKGADSLEDFLY 461

Query:    73 SI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D 
Sbjct:   462 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDI 521

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             E +VHR GRTGR G  G A   F        + L
Sbjct:   522 EEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 555


>TIGR_CMR|VC_2564 [details] [associations]
            symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
            KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
            OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
            DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
            Uniprot:Q9KP15
        Length = 460

 Score = 253 (94.1 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
 Identities = 59/182 (32%), Positives = 94/182 (51%)

Query:    25 IKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLAL-TSIIASEALHGD 83
             I+ Y      ++ R    + + ++ +   ++VF  TKR+   V+ AL  S  +   LHGD
Sbjct:   217 IRQYFYKVEGSAARDEALETLLLHHQPTSSVVFCNTKREVQNVADALHQSGFSVIELHGD 276

Query:    84 ISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGR 143
             + Q +R++ L  F     ++LVATDVAARGLD+ N+D + +Y+L  DPE  VHR GRTGR
Sbjct:   277 MEQRERDQALVQFANKSISILVATDVAARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGR 336

Query:   144 AGKEGTAILMFTSSQRRTVRSLERDVGCKFE-FVSPPVVEDVLESSAEQVVATLNGVHPE 202
             AG +G A   F+ ++   V  ++  +    E    P         +A  V   ++G   +
Sbjct:   337 AGSKGLAFSFFSDNESYRVAQIDEYMDIAIEPSTLPQPAAGARPYAANMVTIQIDGGKKD 396

Query:   203 SV 204
              V
Sbjct:   397 KV 398

 Score = 40 (19.1 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query:   270 VMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNK 314
             ++G L+      A+ IGKI++    R   AV    ++IA + LNK
Sbjct:   403 ILGALTSDGELTAEHIGKINLFPM-RAYVAVH---KKIATKALNK 443


>UNIPROTKB|O05855 [details] [associations]
            symbol:rhlE "PROBABLE ATP-DEPENDENT RNA HELICASE RHLE"
            species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
            wall" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005618
            GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003676
            EMBL:BX842582 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            HOGENOM:HOG000268807 EMBL:CP003248 PIR:D70595 RefSeq:NP_217727.1
            RefSeq:NP_337835.1 RefSeq:YP_006516683.1 SMR:O05855
            EnsemblBacteria:EBMYCT00000003215 EnsemblBacteria:EBMYCT00000071518
            GeneID:13318029 GeneID:888840 GeneID:923099 KEGG:mtc:MT3307
            KEGG:mtu:Rv3211 KEGG:mtv:RVBD_3211 PATRIC:18129030
            TubercuList:Rv3211 OMA:RWQLIDK ProtClustDB:CLSK792349
            Uniprot:O05855
        Length = 527

 Score = 260 (96.6 bits), Expect = 1.4e-20, P = 1.4e-20
 Identities = 56/121 (46%), Positives = 79/121 (65%)

Query:    34 ATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERT 92
             A  K  ++S ++    +G  T++FT+TKR A +V+  LT    A  A+HGD+ Q  RE+ 
Sbjct:   254 ALDKVELVSRVLQARDRGA-TMIFTRTKRTAQKVADELTERGFAVGAVHGDLGQLAREKA 312

Query:    93 LNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAIL 152
             L  FR G   VLVATDVAARG+DI +V  +I+Y+ P D + +VHR GRTGRAG+ G A+ 
Sbjct:   313 LKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVT 372

Query:   153 M 153
             +
Sbjct:   373 L 373


>ASPGD|ASPL0000037981 [details] [associations]
            symbol:AN2932 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
            PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
            Uniprot:Q5B948
        Length = 398

 Score = 256 (95.2 bits), Expect = 1.5e-20, P = 1.5e-20
 Identities = 63/172 (36%), Positives = 97/172 (56%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLI-TVYAKGGKTIVFTQTKRDADEVSLALTSI 74
             + E   EGIK + I+      K   LSDL  TV     + ++F  T+R  D ++  LT+ 
Sbjct:   230 KQELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTIT--QAVIFCNTRRKVDWLTDKLTAR 287

Query:    75 -IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 133
                  A+HGD+ Q QR+  +  FR G   VL+ATD+ ARG+D+  V L+I+Y+LP + E 
Sbjct:   288 DFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANREN 347

Query:   134 FVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             ++HR GR GR G++G AI   T+   R +R +E+    + E + P  V D++
Sbjct:   348 YIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEM-PMNVADLI 398


>UNIPROTKB|Q90ZF6 [details] [associations]
            symbol:olvas "VASA" species:8090 "Oryzias latipes"
            [GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
            RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
            SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
        Length = 617

 Score = 261 (96.9 bits), Expect = 1.5e-20, P = 1.5e-20
 Identities = 57/138 (41%), Positives = 83/138 (60%)

Query:    30 ISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQ 88
             +  T  +KR  L DL+       +T+VF +TKR AD ++  L    + + ++HGD  Q +
Sbjct:   413 LQVTKFNKREQLLDLLRTIGSE-RTMVFVETKRQADFIAAFLCQEKVPTTSIHGDREQRE 471

Query:    89 RERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG 148
             RE+ L  FR GK  VLVAT VA+RGLDIP+V  +++++LPN  + +VHR GRTGR G  G
Sbjct:   472 REKALADFRSGKCPVLVATSVASRGLDIPDVQHVVNFDLPNTIDDYVHRIGRTGRCGNTG 531

Query:   149 TAILMFTSS-QRRTVRSL 165
              A+  +      +  RSL
Sbjct:   532 RAVSFYDPDVDSQLARSL 549


>WB|WBGene00002083 [details] [associations]
            symbol:inf-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0000003 "reproduction"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0040011
            "locomotion" evidence=IMP] [GO:0008340 "determination of adult
            lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
            GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
            GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
            EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
            UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
            DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
            PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
            EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
            UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
            InParanoid:P27639 NextBio:890522 Uniprot:P27639
        Length = 402

 Score = 256 (95.2 bits), Expect = 1.6e-20, P = 1.6e-20
 Identities = 56/171 (32%), Positives = 95/171 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SI 74
             +DE   EGI+ + I+      K   L DL  V     + ++F  T+R  D ++  +T + 
Sbjct:   234 KDELTLEGIRQFYINVQKDEWKFDCLCDLYNV-VNVTQAVIFCNTRRKVDTLTEKMTENQ 292

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                  LHGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP++ E +
Sbjct:   293 FTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENY 352

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR+GR G++G AI   T +  R ++ +E     + E + P  + D++
Sbjct:   353 IHRIGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEEM-PESIADLI 402


>TAIR|locus:2091191 [details] [associations]
            symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
            hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
            processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
            [GO:0035145 "exon-exon junction complex" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
            GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
            EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
            OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
            IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
            ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
            PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
            KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
            PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
            GermOnline:AT3G19760 Uniprot:Q94A52
        Length = 408

 Score = 256 (95.2 bits), Expect = 1.8e-20, P = 1.8e-20
 Identities = 59/171 (34%), Positives = 95/171 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             +DE   EGIK + ++      K   L DL        + ++F  TKR  D +S  + S  
Sbjct:   240 RDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDYLSEKMRSHN 298

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ++HGD+ Q +R+  +N FR G   VL+ TDV ARG+D+  V L+I+Y+LPN+ E +
Sbjct:   299 FTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELY 358

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR+GR G++G AI    S   + +R +E+    + + + P  V D++
Sbjct:   359 IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEM-PMNVADLI 408


>POMBASE|SPAC823.08c [details] [associations]
            symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
            processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
            GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
            OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
            SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
            KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
        Length = 465

 Score = 258 (95.9 bits), Expect = 1.9e-20, P = 1.9e-20
 Identities = 55/139 (39%), Positives = 82/139 (58%)

Query:    37 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNG 95
             K T L  L+   A G   I+F +T  D   +++ L ++  ++  LHG +SQ  R   LN 
Sbjct:   272 KDTYLVYLVNELA-GNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNK 330

Query:    96 FRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 155
             F+ G  + LVATDVAARGLDIP VD++I+Y++P D + ++HR GRT RAG+ G +I + T
Sbjct:   331 FKSGARSTLVATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIALVT 390

Query:   156 SSQRRTVRSLERDVGCKFE 174
                      +E  +G K +
Sbjct:   391 QYDLEPFLRIEATIGKKMQ 409


>UNIPROTKB|E2RRQ7 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
            Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
        Length = 706

 Score = 261 (96.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 63/156 (40%), Positives = 87/156 (55%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLI--TVYAKGGKTIVFTQTKRDADEVSLA 70
             +VG+  E + + +    +    + KR+ L DL+  T   K   T+VF +TK+ AD +   
Sbjct:   449 RVGSTSENITQKV----VWVEESDKRSFLLDLLNATESGKDSLTLVFVETKKGADSLEDF 504

Query:    71 LTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPN 129
             L     A  ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+
Sbjct:   505 LYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPS 564

Query:   130 DPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             D E +VHR GRTGR G  G A   F        + L
Sbjct:   565 DIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 600


>UNIPROTKB|G3MYF0 [details] [associations]
            symbol:LOC100300937 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
            Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
        Length = 608

 Score = 260 (96.6 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 62/179 (34%), Positives = 96/179 (53%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT- 72
             VG  D      +K   I TT   KR+++ + +   +   K IVF   K  AD++S  L+ 
Sbjct:   409 VGTLDLVTVNTVKQNIIVTTEEEKRSLVKEFLQSLSPKDKVIVFVSRKLVADDLSSDLSI 468

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
               I  ++LHGD  Q  R++ L  FR G+  +L+ATD+AARGLD+ +V  + +Y  P + E
Sbjct:   469 QGIPVQSLHGDREQSDRDQALEDFRTGRVKILIATDLAARGLDVSDVTHVYNYNFPRNIE 528

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQ 191
              +VHR GRTGRAGK G +I + T    +    L + +    + V PP +  + +   +Q
Sbjct:   529 EYVHRVGRTGRAGKIGESITLVTQDDWKIADELIKILQRANQIV-PPSLRSMADRFKKQ 586


>SGD|S000002428 [details] [associations]
            symbol:FAL1 "Nucleolar protein required for maturation of 18S
            rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
            "nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
            rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
            processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
            EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
            OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
            RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
            SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
            STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
            GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
            CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
            Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
            Uniprot:Q12099
        Length = 399

 Score = 255 (94.8 bits), Expect = 2.2e-20, P = 2.2e-20
 Identities = 56/153 (36%), Positives = 88/153 (57%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT-SI 74
             +DE   EGIK Y ++      K   L D+        + ++F  TK+  D +S  L  S 
Sbjct:   231 RDEISLEGIKQYVVNVDKEEWKFDTLCDIYDSLTIT-QCVIFCNTKKKVDWLSQRLIQSN 289

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
              A  ++HGD+ Q +R++ +N FR G   VL++TDV ARG+D+  V L+I+Y+LP   E +
Sbjct:   290 FAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENY 349

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLER 167
             +HR GR+GR G++G AI   T +    +R +E+
Sbjct:   350 IHRIGRSGRFGRKGVAINFITKADLAKLREIEK 382


>UNIPROTKB|D3IVZ2 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
            EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
            Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
        Length = 661

 Score = 260 (96.6 bits), Expect = 2.5e-20, P = 2.5e-20
 Identities = 60/143 (41%), Positives = 81/143 (56%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +VG+  E + + +    +      KR+ L DL+        T+VF +TK+ AD +   L 
Sbjct:   407 RVGSTSENITQKV----VWVEEADKRSFLLDLLNATGTDSLTLVFVETKKGADSLEDFLY 462

Query:    73 SI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP D 
Sbjct:   463 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPGDI 522

Query:   132 ETFVHRSGRTGRAGKEGTAILMF 154
             E +VHR GRTGR G  G A   F
Sbjct:   523 EEYVHRIGRTGRVGNLGLATSFF 545


>UNIPROTKB|Q9NZE6 [details] [associations]
            symbol:EIF4A2 "BM-010" species:9606 "Homo sapiens"
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CH471052 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            HOVERGEN:HBG107989 HSSP:P10081 EMBL:AC112907 UniGene:Hs.518475
            UniGene:Hs.599481 HGNC:HGNC:3284 ChiTaRS:EIF4A2 EMBL:AF208852
            IPI:IPI00030296 SMR:Q9NZE6 STRING:Q9NZE6 Ensembl:ENST00000356531
            UCSC:uc003fqv.3 Uniprot:Q9NZE6
        Length = 312

 Score = 241 (89.9 bits), Expect = 2.5e-20, P = 2.5e-20
 Identities = 53/152 (34%), Positives = 84/152 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGIK + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   144 KEELTLEGIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARD 202

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ALHGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   203 FTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 262

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 166
             +HR GR GR G++G AI   T   +R +R +E
Sbjct:   263 IHRIGRGGRFGRKGVAINFVTEEDKRILRDIE 294


>UNIPROTKB|F1LP27 [details] [associations]
            symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            IPI:IPI00949972 Ensembl:ENSRNOT00000066369 ArrayExpress:F1LP27
            Uniprot:F1LP27
        Length = 312

 Score = 241 (89.9 bits), Expect = 2.5e-20, P = 2.5e-20
 Identities = 53/152 (34%), Positives = 84/152 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGIK + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   144 KEELTLEGIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARD 202

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ALHGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   203 FTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 262

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 166
             +HR GR GR G++G AI   T   +R +R +E
Sbjct:   263 IHRIGRGGRFGRKGVAINFVTEEDKRILRDIE 294


>FB|FBgn0001942 [details] [associations]
            symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
            "Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0006413 "translational initiation"
            evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
            factor 4F complex" evidence=ISS] [GO:0003743 "translation
            initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
            evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
            ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
            unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
            cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
            [GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
            "instar larval development" evidence=TAS] [GO:0009950
            "dorsal/ventral axis specification" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
            splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
            [GO:0007052 "mitotic spindle organization" evidence=IMP]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
            damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
            cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
            maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
            [GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
            organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
            GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
            GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
            GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
            GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
            EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
            RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
            RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
            ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
            MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
            EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
            EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
            EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
            KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
            InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
            GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
            Uniprot:Q02748
        Length = 403

 Score = 254 (94.5 bits), Expect = 3.3e-20, P = 3.3e-20
 Identities = 53/154 (34%), Positives = 92/154 (59%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVS--LALTS 73
             ++E   EGIK + ++    + K   L DL    +   ++++F  T+R  D+++  +++ +
Sbjct:   235 KEELTLEGIKQFYVNVKQENWKLGTLCDLYDTLSIT-QSVIFCNTRRKVDQLTQEMSIHN 293

Query:    74 IIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 133
                S A+HGD+ Q  RE  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP++ E 
Sbjct:   294 FTVS-AMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNREN 352

Query:   134 FVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLER 167
             ++HR GR GR G++G AI   T   RR ++ +E+
Sbjct:   353 YIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQ 386


>UNIPROTKB|F1S0I6 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
            EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
            Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
        Length = 650

 Score = 259 (96.2 bits), Expect = 3.3e-20, P = 3.3e-20
 Identities = 66/182 (36%), Positives = 97/182 (53%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLAL-T 72
             VG  D      +K   I TT   KR+ +   I   +   K I+F   K  AD +S  L  
Sbjct:   452 VGTLDLVAVSTVKQNIIVTTEDEKRSHIQTFIESMSPKDKVIIFVSRKAVADHLSSDLGI 511

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
               I+ E+LHG+  Q  RER L  F+ GK  +L+ATD+A+RGLD+ +V  + +Y+ P + E
Sbjct:   512 RHISVESLHGNREQGDRERALKNFKTGKVRILIATDLASRGLDVHDVTHVYNYDFPRNIE 571

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
              +VHR GRTGRAG+ G +I + T S  +    L   +    E  +  + ED++E  AE+ 
Sbjct:   572 EYVHRVGRTGRAGRTGVSITLITRSDWKIAGELIHIL----ERANQSIPEDLVEM-AERY 626

Query:   193 VA 194
              A
Sbjct:   627 KA 628


>UNIPROTKB|B4DXX7 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
            sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
            UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
            IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
            UCSC:uc011nar.1 Uniprot:B4DXX7
        Length = 657

 Score = 259 (96.2 bits), Expect = 3.4e-20, P = 3.4e-20
 Identities = 60/154 (38%), Positives = 84/154 (54%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +VG+  E + + +    +      KR+ L D++        T+VF +TK+ AD +   L 
Sbjct:   402 RVGSTSENITQKV----VWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLY 457

Query:    73 SI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D 
Sbjct:   458 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDI 517

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             E +VHR GRTGR G  G A   F        + L
Sbjct:   518 EEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDL 551


>WB|WBGene00010260 [details] [associations]
            symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
            RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
            STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
            EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
            EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
            KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
            WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
            ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
        Length = 561

 Score = 258 (95.9 bits), Expect = 3.4e-20, P = 3.4e-20
 Identities = 54/133 (40%), Positives = 85/133 (63%)

Query:    36 SKRTILSDLIT--VYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERT 92
             +K+  L +L+   +  K  KTI+F +TKR ADE++ A+      +  +HGD +Q +R+  
Sbjct:   359 AKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWV 418

Query:    93 LNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAIL 152
             L  F+ GK  +++ATDVAARGLD+ ++  +I+Y+ PN+ E +VHR GRTGR+ K+GTA  
Sbjct:   419 LQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYT 478

Query:   153 MFTSSQRRTVRSL 165
              FT +     + L
Sbjct:   479 FFTHTNASKAKDL 491


>UNIPROTKB|O15523 [details] [associations]
            symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
            HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
            HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
            EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
            RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
            SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
            PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
            Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
            KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
            HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
            InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
            NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
            Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
        Length = 660

 Score = 259 (96.2 bits), Expect = 3.4e-20, P = 3.4e-20
 Identities = 60/154 (38%), Positives = 84/154 (54%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 72
             +VG+  E + + +    +      KR+ L D++        T+VF +TK+ AD +   L 
Sbjct:   405 RVGSTSENITQKV----VWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLY 460

Query:    73 SI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
                 A  ++HGD SQ  RE  L+ FR GK  +LVAT VAARGLDI NV  +I+++LP+D 
Sbjct:   461 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDI 520

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             E +VHR GRTGR G  G A   F        + L
Sbjct:   521 EEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDL 554


>CGD|CAL0003204 [details] [associations]
            symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
            EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
            ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
            GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
            Uniprot:Q59LU0
        Length = 562

 Score = 258 (95.9 bits), Expect = 3.4e-20, P = 3.4e-20
 Identities = 51/112 (45%), Positives = 74/112 (66%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  K +VF  TKR  DE++  L S    + A+HGD  Q++R+  L+ FR+GK +++VATD
Sbjct:   373 KDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATD 432

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRR 160
             VAARG+D+  +  +I+Y++P + E +VHR GRTGR G  GTAI  FT    +
Sbjct:   433 VAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSK 484


>FB|FBgn0035720 [details] [associations]
            symbol:CG10077 species:7227 "Drosophila melanogaster"
            [GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005875 "microtubule associated complex"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
            EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
            GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
            GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
            ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
            RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
            STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
            UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
        Length = 818

 Score = 260 (96.6 bits), Expect = 3.8e-20, P = 3.8e-20
 Identities = 51/114 (44%), Positives = 76/114 (66%)

Query:    53 KTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAA 111
             KTI+F +TK+  DE++  ++     + A+HGD SQ +R+  L+ FR G+ ++LVATDVAA
Sbjct:   406 KTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAA 465

Query:   112 RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             RGLD+ +V  +I+Y+ P++ E +VHR GRTGR+   GTA  +FT S       L
Sbjct:   466 RGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDL 519


>SGD|S000003046 [details] [associations]
            symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
            family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
            subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
            processing" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
            "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
            tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
            EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
            ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
            MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
            EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
            KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
            KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
            GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
        Length = 523

 Score = 257 (95.5 bits), Expect = 3.8e-20, P = 3.8e-20
 Identities = 66/180 (36%), Positives = 98/180 (54%)

Query:    14 VGNQDEKLAEG--IKLYAISTTATSKRTILSDLITVYAKGGK----TIVFTQTKRDADEV 67
             +GN D+  A     ++  +      +R +L +L+  Y  G K     ++F   K++A  V
Sbjct:   317 IGNTDQLTANKRITQIVEVVDPRGKERKLL-ELLKKYHSGPKKNEKVLIFALYKKEAARV 375

Query:    68 SLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYE 126
                L  +     A+HGD+SQ QR + LN F+ GK  +L+ATDVAARGLDIPNV  +I+  
Sbjct:   376 ERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLT 435

Query:   127 LPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLE 186
              P   E +VHR GRTGRAG+ GTA  +FT  ++     L   +       + PV ED+++
Sbjct:   436 FPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVLNG----ANQPVPEDLIK 491


>UNIPROTKB|A4QSS5 [details] [associations]
            symbol:DBP2 "ATP-dependent RNA helicase DBP2"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
            GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
            ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
            KEGG:mgr:MGG_16901 Uniprot:A4QSS5
        Length = 548

 Score = 257 (95.5 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 49/114 (42%), Positives = 77/114 (67%)

Query:    53 KTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAA 111
             K ++F  TKR ADE++  L      + ++HGD  Q++R+  L+ F+ GK  ++VATDVA+
Sbjct:   376 KILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVAS 435

Query:   112 RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             RG+D+ N+  +++Y+ PN+ E ++HR GRTGRAG +GTAI  FT+   +  R L
Sbjct:   436 RGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQARDL 489


>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
            symbol:PF14_0437 "helicase, truncated,
            putative" species:5833 "Plasmodium falciparum" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
            MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
            GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
            HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
        Length = 527

 Score = 256 (95.2 bits), Expect = 5.3e-20, P = 5.3e-20
 Identities = 53/139 (38%), Positives = 84/139 (60%)

Query:    47 VYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLV 105
             ++    + IVF +TK++AD ++ AL    + +  +HGD  Q +R   LN F+ GK  +++
Sbjct:   356 IFKDNDRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMI 415

Query:   106 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             ATDVA+RGLDI NV  +I+++ PN  E +VHR GRTGRAG  G +    T+ + R  + L
Sbjct:   416 ATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGRTGRAGSHGASFTFLTADKYRLAKDL 475

Query:   166 ERDVGCKFEFVSPPVVEDV 184
              + +  + E   PP +E +
Sbjct:   476 VKILR-ESEQPVPPQLEKI 493


>UNIPROTKB|Q8IL13 [details] [associations]
            symbol:PF14_0437 "Helicase, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
            ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
            PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
            KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
            HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
        Length = 527

 Score = 256 (95.2 bits), Expect = 5.3e-20, P = 5.3e-20
 Identities = 53/139 (38%), Positives = 84/139 (60%)

Query:    47 VYAKGGKTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLV 105
             ++    + IVF +TK++AD ++ AL    + +  +HGD  Q +R   LN F+ GK  +++
Sbjct:   356 IFKDNDRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMI 415

Query:   106 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             ATDVA+RGLDI NV  +I+++ PN  E +VHR GRTGRAG  G +    T+ + R  + L
Sbjct:   416 ATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGRTGRAGSHGASFTFLTADKYRLAKDL 475

Query:   166 ERDVGCKFEFVSPPVVEDV 184
              + +  + E   PP +E +
Sbjct:   476 VKILR-ESEQPVPPQLEKI 493


>UNIPROTKB|B4DLW8 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
            HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
            STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
            Uniprot:B4DLW8
        Length = 535

 Score = 256 (95.2 bits), Expect = 5.5e-20, P = 5.5e-20
 Identities = 52/117 (44%), Positives = 74/117 (63%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTIVF +TKR  DE++  +      +  +HGD SQ +R+  LN F+ GK  +L+ATD
Sbjct:   261 KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 320

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             VA+RGLD+ +V  +I+Y+ PN  E ++HR GRT R+ K GTA   FT +  + V  L
Sbjct:   321 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 377


>UNIPROTKB|F1NL04 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
            evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
            [GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
            of protein localization" evidence=IEA] [GO:0033391 "chromatoid
            body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
            GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
            EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
            Ensembl:ENSGALT00000038830 Uniprot:F1NL04
        Length = 542

 Score = 256 (95.2 bits), Expect = 5.8e-20, P = 5.8e-20
 Identities = 60/133 (45%), Positives = 82/133 (61%)

Query:    36 SKRTILSDLITVYAKGG-KTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTL 93
             SKR  L +++   + GG +T+VF  TK+ AD ++  L    + S ++HGD  Q +RE  L
Sbjct:   405 SKRDKLIEILQ--STGGERTMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIAL 462

Query:    94 NGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILM 153
               FR GK  +LVAT VA+RGLDI NV  +I+++LPN  E +VHR GRTGR G  G A+  
Sbjct:   463 RDFRSGKCQILVATSVASRGLDIENVQHVINFDLPNTIEDYVHRIGRTGRCGNTGKAVSF 522

Query:   154 FTS-SQRRTVRSL 165
             F   S    V+SL
Sbjct:   523 FDDQSDGHLVQSL 535


>ASPGD|ASPL0000014018 [details] [associations]
            symbol:fal1 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
            ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
            EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
            OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
        Length = 399

 Score = 252 (93.8 bits), Expect = 6.0e-20, P = 6.0e-20
 Identities = 59/171 (34%), Positives = 94/171 (54%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             +DE   EGIK Y I+      K   L DL        + ++F  T+R  D ++  +    
Sbjct:   230 RDELTLEGIKQYFIAVEKEEWKFDTLCDLYDTLTIT-QAVIFCNTRRKVDWLTDKMREAN 288

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ++HG++ Q +R+  +  FRQG   VL++TDV ARG+D+  V L+I+Y+LP + E +
Sbjct:   289 FTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENY 348

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR+GR G++G AI   TS   R +R +E     + + + P  V D+L
Sbjct:   349 IHRIGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEM-PMNVADLL 398


>UNIPROTKB|F1N991 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
            meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
            [GO:0032880 "regulation of protein localization" evidence=IEA]
            [GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
            GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
            OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
            IPI:IPI00819436 ProteinModelPortal:F1N991
            Ensembl:ENSGALT00000023724 Uniprot:F1N991
        Length = 568

 Score = 256 (95.2 bits), Expect = 6.5e-20, P = 6.5e-20
 Identities = 60/133 (45%), Positives = 82/133 (61%)

Query:    36 SKRTILSDLITVYAKGG-KTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTL 93
             SKR  L +++   + GG +T+VF  TK+ AD ++  L    + S ++HGD  Q +RE  L
Sbjct:   405 SKRDKLIEILQ--STGGERTMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIAL 462

Query:    94 NGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILM 153
               FR GK  +LVAT VA+RGLDI NV  +I+++LPN  E +VHR GRTGR G  G A+  
Sbjct:   463 RDFRSGKCQILVATSVASRGLDIENVQHVINFDLPNTIEDYVHRIGRTGRCGNTGKAVSF 522

Query:   154 FTS-SQRRTVRSL 165
             F   S    V+SL
Sbjct:   523 FDDQSDGHLVQSL 535


>TAIR|locus:2030285 [details] [associations]
            symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
            "plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
            membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
            to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
            stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
            GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
            ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
            EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
            RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
            SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
            EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
            GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
            PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
            Uniprot:Q9CAI7
        Length = 414

 Score = 252 (93.8 bits), Expect = 7.6e-20, P = 7.6e-20
 Identities = 59/171 (34%), Positives = 94/171 (54%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSII 75
             +DE   EGIK + ++      K   L DL    A   ++++F  T+R  D ++  + S  
Sbjct:   246 RDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRD 304

Query:    76 AS-EALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
              +  A HGD+ Q+ R+  +  FR G   VL+ TD+ ARG+D+  V L+I+++LP  PE +
Sbjct:   305 HTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENY 364

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR+GR G++G AI   TS   R +  ++R      E + P  V D+L
Sbjct:   365 LHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYNVVVEEL-PSNVADLL 414


>UNIPROTKB|F1MBQ8 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
            class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
            receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
            receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043517 "positive regulation of DNA damage response, signal
            transduction by p53 class mediator" evidence=IEA] [GO:0036002
            "pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
            of intracellular estrogen receptor signaling pathway" evidence=IEA]
            [GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
            "circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0003713 "transcription coactivator activity"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
            GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
            GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
            KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
            EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
            UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
            Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
            NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
        Length = 614

 Score = 256 (95.2 bits), Expect = 7.9e-20, P = 7.9e-20
 Identities = 52/117 (44%), Positives = 74/117 (63%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTIVF +TKR  DE++  +      +  +HGD SQ +R+  LN F+ GK  +L+ATD
Sbjct:   340 KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             VA+RGLD+ +V  +I+Y+ PN  E ++HR GRT R+ K GTA   FT +  + V  L
Sbjct:   400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456


>UNIPROTKB|J3KTA4 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
            Ensembl:ENST00000578804 Uniprot:J3KTA4
        Length = 614

 Score = 256 (95.2 bits), Expect = 7.9e-20, P = 7.9e-20
 Identities = 52/117 (44%), Positives = 74/117 (63%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTIVF +TKR  DE++  +      +  +HGD SQ +R+  LN F+ GK  +L+ATD
Sbjct:   340 KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             VA+RGLD+ +V  +I+Y+ PN  E ++HR GRT R+ K GTA   FT +  + V  L
Sbjct:   400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456


>UNIPROTKB|P17844 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0001701 "in utero embryonic development" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
            [GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
            "circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
            evidence=IEA] [GO:0045069 "regulation of viral genome replication"
            evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
            [GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
            evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0043517 "positive regulation of DNA damage response, signal
            transduction by p53 class mediator" evidence=IMP] [GO:0072332
            "intrinsic apoptotic signaling pathway by p53 class mediator"
            evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
            "regulation of skeletal muscle cell differentiation" evidence=ISS]
            [GO:0045667 "regulation of osteoblast differentiation"
            evidence=ISS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0050681
            "androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
            of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
            "positive regulation of intracellular estrogen receptor signaling
            pathway" evidence=IDA] [GO:0003713 "transcription coactivator
            activity" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
            "pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=IDA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
            GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
            GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
            GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
            GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
            EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
            RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
            PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
            IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
            DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
            PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
            Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
            CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
            HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
            InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
            EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
            ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
            Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
        Length = 614

 Score = 256 (95.2 bits), Expect = 7.9e-20, P = 7.9e-20
 Identities = 52/117 (44%), Positives = 74/117 (63%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTIVF +TKR  DE++  +      +  +HGD SQ +R+  LN F+ GK  +L+ATD
Sbjct:   340 KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             VA+RGLD+ +V  +I+Y+ PN  E ++HR GRT R+ K GTA   FT +  + V  L
Sbjct:   400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456


>UNIPROTKB|A5A6J2 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
            activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
            "estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=ISS]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
            cell differentiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
            GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
            CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
            UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
            GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
            Uniprot:A5A6J2
        Length = 614

 Score = 256 (95.2 bits), Expect = 7.9e-20, P = 7.9e-20
 Identities = 52/117 (44%), Positives = 74/117 (63%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTIVF +TKR  DE++  +      +  +HGD SQ +R+  LN F+ GK  +L+ATD
Sbjct:   340 KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             VA+RGLD+ +V  +I+Y+ PN  E ++HR GRT R+ K GTA   FT +  + V  L
Sbjct:   400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456


>UNIPROTKB|Q5R4I9 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
            activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
            "estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=ISS]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
            cell differentiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
            GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
            GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
            RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
            PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
            Uniprot:Q5R4I9
        Length = 614

 Score = 256 (95.2 bits), Expect = 7.9e-20, P = 7.9e-20
 Identities = 52/117 (44%), Positives = 74/117 (63%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTIVF +TKR  DE++  +      +  +HGD SQ +R+  LN F+ GK  +L+ATD
Sbjct:   340 KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             VA+RGLD+ +V  +I+Y+ PN  E ++HR GRT R+ K GTA   FT +  + V  L
Sbjct:   400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456


>MGI|MGI:105037 [details] [associations]
            symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
            "regulation of alternative mRNA splicing, via spliceosome"
            evidence=ISO] [GO:0001701 "in utero embryonic development"
            evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003712 "transcription cofactor activity" evidence=IDA]
            [GO:0003713 "transcription coactivator activity" evidence=ISO]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
            [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
            "nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
            evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
            acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
            receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
            complex" evidence=ISO] [GO:0033148 "positive regulation of
            intracellular estrogen receptor signaling pathway" evidence=ISO]
            [GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
            replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=IMP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
            evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
            [GO:0060765 "regulation of androgen receptor signaling pathway"
            evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
            p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
            skeletal muscle cell differentiation" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
            GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
            GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
            GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
            EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
            ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
            UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
            DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
            PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
            Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
        Length = 614

 Score = 256 (95.2 bits), Expect = 7.9e-20, P = 7.9e-20
 Identities = 52/117 (44%), Positives = 74/117 (63%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTIVF +TKR  DE++  +      +  +HGD SQ +R+  LN F+ GK  +L+ATD
Sbjct:   340 KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             VA+RGLD+ +V  +I+Y+ PN  E ++HR GRT R+ K GTA   FT +  + V  L
Sbjct:   400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456


>RGD|619906 [details] [associations]
            symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
            development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
            activity" evidence=ISO] [GO:0003713 "transcription coactivator
            activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
            evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
            rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
            evidence=IDA] [GO:0030331 "estrogen receptor binding"
            evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
            evidence=ISO] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
            "pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
            replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
            evidence=IDA] [GO:0050681 "androgen receptor binding"
            evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
            signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
            signaling pathway by p53 class mediator" evidence=IEA;ISO]
            [GO:2001014 "regulation of skeletal muscle cell differentiation"
            evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
            GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
            GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
            EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
            GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
            GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
            EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
            UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
            Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
            UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
            Genevestigator:Q6AYI1 Uniprot:Q6AYI1
        Length = 615

 Score = 256 (95.2 bits), Expect = 7.9e-20, P = 7.9e-20
 Identities = 52/117 (44%), Positives = 74/117 (63%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTIVF +TKR  DE++  +      +  +HGD SQ +R+  LN F+ GK  +L+ATD
Sbjct:   340 KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             VA+RGLD+ +V  +I+Y+ PN  E ++HR GRT R+ K GTA   FT +  + V  L
Sbjct:   400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456


>UNIPROTKB|E1C2R8 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
            development" evidence=IEA] [GO:0072358 "cardiovascular system
            development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
            Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
        Length = 496

 Score = 254 (94.5 bits), Expect = 8.5e-20, P = 8.5e-20
 Identities = 52/134 (38%), Positives = 82/134 (61%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTI+F +TKR  D+++  +      +  +HGD SQ +R+  LN FR GK  +L+ATD
Sbjct:   336 KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATD 395

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERD 168
             VA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    +  R L + 
Sbjct:   396 VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKV 455

Query:   169 VGCKFEFVSPPVVE 182
             +    + ++P +++
Sbjct:   456 LEEANQAINPKLMQ 469


>ZFIN|ZDB-GENE-040426-915 [details] [associations]
            symbol:eif4a3 "eukaryotic translation initiation
            factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
            translation" evidence=IEA] [GO:0016607 "nuclear speck"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
            GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
            GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
            GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
            OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
            UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
            PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
            NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
        Length = 406

 Score = 251 (93.4 bits), Expect = 9.1e-20, P = 9.1e-20
 Identities = 59/171 (34%), Positives = 94/171 (54%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             +DE   EGIK + ++      K   L DL        + ++F  TKR  D ++  +    
Sbjct:   238 RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREAN 296

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ++HGD+ Q +RE  +  FR G   VL++TDV ARGLD+  V LII+Y+LPN+ E +
Sbjct:   297 FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVSQVSLIINYDLPNNRELY 356

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR+GR G++G AI    +   R +R +E+    + + + P  V D++
Sbjct:   357 IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM-PMNVADLI 406


>UNIPROTKB|F1PEA6 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=IEA] [GO:0003712 "transcription cofactor
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
            GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
            Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
        Length = 671

 Score = 256 (95.2 bits), Expect = 9.6e-20, P = 9.6e-20
 Identities = 52/117 (44%), Positives = 74/117 (63%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTIVF +TKR  DE++  +      +  +HGD SQ +R+  LN F+ GK  +L+ATD
Sbjct:   397 KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 456

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             VA+RGLD+ +V  +I+Y+ PN  E ++HR GRT R+ K GTA   FT +  + V  L
Sbjct:   457 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 513


>CGD|CAL0001638 [details] [associations]
            symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
            evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
            rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
            RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
            SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
            KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
        Length = 399

 Score = 250 (93.1 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 59/174 (33%), Positives = 96/174 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRD----ADEVSLAL 71
             +DE    GIK Y +       K   L DL        + ++F  TK      AD++    
Sbjct:   231 RDEISLSGIKQYYVQCEREDWKFDTLCDLYDNLTIT-QAVIFCNTKLKVNWLADQMKKQN 289

Query:    72 TSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 131
              +++A   +HGD+ Q +R+  +N FR+G   VL++TDV ARG+D+  V L+I+Y+LP D 
Sbjct:   290 FTVVA---MHGDMKQDERDSIMNDFRRGNSRVLISTDVWARGIDVQQVSLVINYDLPTDK 346

Query:   132 ETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             E ++HR GR+GR G++GTAI + T     T++  E+    K + + P  + D++
Sbjct:   347 ENYIHRIGRSGRFGRKGTAINLITKDDVVTLKEFEKYYSTKIKEM-PMNINDIM 399


>CGD|CAL0005460 [details] [associations]
            symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
            precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
            ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
            (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
            "RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
            EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
            ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
            GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
            Uniprot:Q5APT8
        Length = 564

 Score = 254 (94.5 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 71/223 (31%), Positives = 114/223 (51%)

Query:     1 MLNYFVMFSHSTQVGNQDEKLAEGIKLYAIST-TATSKRTILSDLITVY----AKGGKTI 55
             + N F+       VG++DE  A       +       K   L  L+  Y    +   K +
Sbjct:   345 LANNFMNSPVKVTVGDRDELSANKRITQVVEVINKFDKEKKLIQLLRKYNANESSDNKIL 404

Query:    56 VFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGL 114
             +F   K++A  +   L  +  +  A+HGD+SQ QR   L+ F+ G+  +L+ATDVAARGL
Sbjct:   405 IFALYKKEASRIENFLKRNRFSVAAIHGDLSQQQRTAALSAFKSGQSNLLLATDVAARGL 464

Query:   115 DIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKF- 173
             DIPNV ++I+   P   E +VHR GRTGRAG +GTA  +FT  ++    +L     C   
Sbjct:   465 DIPNVKVVINLTFPLTIEDYVHRIGRTGRAGAKGTAHTLFTEDEKHLSGAL-----CNIL 519

Query:   174 EFVSPPVVEDVLE--SSAEQVVATLNGVHPESVEFFTPTAQRL 214
                + PV E++L+     ++   ++ G   + V+  T TA+++
Sbjct:   520 RGANQPVPEELLKFGGHTKKKAHSVYGAFYKDVDM-TKTAKKI 561


>ZFIN|ZDB-GENE-031030-2 [details] [associations]
            symbol:eif4a1a "eukaryotic translation initiation
            factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
            "helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0006413
            "translational initiation" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
            KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
            IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
            STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
            KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
            Uniprot:Q802C9
        Length = 406

 Score = 250 (93.1 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 54/152 (35%), Positives = 86/152 (56%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGI+ + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   238 KEELTLEGIRQFYINVEKEEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARD 296

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ALHGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   297 FTVSALHGDMEQKERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 356

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 166
             +HR GR GR G++G AI M T   +RT+R +E
Sbjct:   357 IHRIGRGGRFGRKGVAINMITEDDKRTLRDIE 388


>POMBASE|SPBC17D1.06 [details] [associations]
            symbol:dbp3 "ATP-dependent RNA helicase Dbp3
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
            "ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
            [GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
            processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
            GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
            PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
            STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
            GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
            Uniprot:Q10202
        Length = 578

 Score = 254 (94.5 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 61/151 (40%), Positives = 86/151 (56%)

Query:    14 VGNQDEKLAEGI-KLYAISTTATSKRTILSDLITVY-AKGGKT---IVFTQTKRDADEVS 68
             +G+ +   ++ I ++  I     SK  +L +L+  + + GGK    ++F   K++A  V 
Sbjct:   375 IGSDELAASQNITQIVEILDDPRSKERMLDNLLRKHLSSGGKDDKILIFVLYKKEAARVE 434

Query:    69 LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELP 128
               L        +HGD+SQ  R + LN F+ GK  VLVATDVAARGLDIP V L+I+   P
Sbjct:   435 GTLARKYNVVGIHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFP 494

Query:   129 NDPETFVHRSGRTGRAGKEGTAILMFTSSQR 159
                E +VHR GRTGRA  +GTAI  FT   +
Sbjct:   495 LTIEDYVHRIGRTGRANTKGTAITFFTPQDK 525


>ZFIN|ZDB-GENE-030131-18 [details] [associations]
            symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
            UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
            KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
            Uniprot:F1QBS1
        Length = 671

 Score = 255 (94.8 bits), Expect = 1.4e-19, P = 1.4e-19
 Identities = 53/134 (39%), Positives = 81/134 (60%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTI+F +TK+  DE++  +      +  +HGD SQ +R+  L  FR GK  +L+ATD
Sbjct:   341 KENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATD 400

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERD 168
             VA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    R  R L R 
Sbjct:   401 VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRV 460

Query:   169 VGCKFEFVSPPVVE 182
             +    + ++P +++
Sbjct:   461 LEEARQAINPKLLQ 474


>UNIPROTKB|F1NM08 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003712 "transcription cofactor activity" evidence=IEA]
            [GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
            ArrayExpress:F1NM08 Uniprot:F1NM08
        Length = 595

 Score = 254 (94.5 bits), Expect = 1.4e-19, P = 1.4e-19
 Identities = 51/117 (43%), Positives = 74/117 (63%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTIVF +TKR  D+++  +      +  +HGD SQ +R+  LN F+ GK  +L+ATD
Sbjct:   328 KENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 387

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             VA+RGLD+ +V  +I+Y+ PN  E ++HR GRT R+ K GTA   FT +  + V  L
Sbjct:   388 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVNDL 444


>UNIPROTKB|F1NXI3 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0003713 "transcription coactivator
            activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
            receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
            intracellular estrogen receptor signaling pathway" evidence=IEA]
            [GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=IEA]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
            GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
            GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
            GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
            ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
            ArrayExpress:F1NXI3 Uniprot:F1NXI3
        Length = 603

 Score = 254 (94.5 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 51/117 (43%), Positives = 74/117 (63%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTIVF +TKR  D+++  +      +  +HGD SQ +R+  LN F+ GK  +L+ATD
Sbjct:   336 KENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 395

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             VA+RGLD+ +V  +I+Y+ PN  E ++HR GRT R+ K GTA   FT +  + V  L
Sbjct:   396 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVNDL 452


>TIGR_CMR|SPO_3833 [details] [associations]
            symbol:SPO_3833 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            KO:K05592 InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_169021.1
            ProteinModelPortal:Q5LLT8 GeneID:3196362 KEGG:sil:SPO3833
            PATRIC:23381169 HOGENOM:HOG000268794 OMA:MQHRSGR Uniprot:Q5LLT8
        Length = 709

 Score = 255 (94.8 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 62/177 (35%), Positives = 94/177 (53%)

Query:    55 IVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 113
             IVF  T+     ++  L +   A  +L G++SQ +R   L   R G+  V VATDVAARG
Sbjct:   269 IVFANTRAAVARLTARLANRGFAVVSLSGELSQDERSHALQAMRDGRARVCVATDVAARG 328

Query:   114 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKF 173
             +D+PN+DL+IH +LP + E  +HRSGRTGRAG++G + L+      +    L +    + 
Sbjct:   329 IDLPNLDLVIHADLPTNTEGLLHRSGRTGRAGRKGISALIVPDKISKKASRLLKWAKIEA 388

Query:   174 EFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAALAQL 230
             E+   P  ED+L     +++A      P   E  T  A  L+E+     +A A  +L
Sbjct:   389 EWTQAPTPEDILAKDEARLLADPLWTDPVEDEE-TRIAAGLMEQFTAQQIAVACLRL 444


>FB|FBgn0037573 [details] [associations]
            symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
            melanogaster" [GO:0016281 "eukaryotic translation initiation factor
            4F complex" evidence=ISS] [GO:0003743 "translation initiation
            factor activity" evidence=ISS] [GO:0006413 "translational
            initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
            oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
            DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
            GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
            EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
            STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
            InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
        Length = 399

 Score = 249 (92.7 bits), Expect = 1.6e-19, P = 1.6e-19
 Identities = 57/171 (33%), Positives = 94/171 (54%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             +DE   EGIK + ++      K   L DL        + ++F  TKR  D ++  +    
Sbjct:   231 RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREAN 289

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ++HGD+ Q +R+  +  FR G+  VL+ TDV ARG+D+  V L+I+Y+LPN+ E +
Sbjct:   290 FTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELY 349

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR+GR G++G AI    S   R +R +E+    + + + P  V D++
Sbjct:   350 IHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEM-PVNVADLI 399


>UNIPROTKB|A7E307 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0072358 "cardiovascular system development"
            evidence=IEA] [GO:0009791 "post-embryonic development"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
            CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
            GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
            IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
            Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
            InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
        Length = 650

 Score = 254 (94.5 bits), Expect = 1.7e-19, P = 1.7e-19
 Identities = 52/134 (38%), Positives = 82/134 (61%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTI+F +TKR  D+++  +      +  +HGD SQ +R+  LN FR GK  +L+ATD
Sbjct:   338 KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATD 397

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERD 168
             VA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    +  R L + 
Sbjct:   398 VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKV 457

Query:   169 VGCKFEFVSPPVVE 182
             +    + ++P +++
Sbjct:   458 LEEANQAINPKLMQ 471


>UNIPROTKB|E2RJ60 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
            Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
        Length = 650

 Score = 254 (94.5 bits), Expect = 1.7e-19, P = 1.7e-19
 Identities = 52/134 (38%), Positives = 82/134 (61%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTI+F +TKR  D+++  +      +  +HGD SQ +R+  LN FR GK  +L+ATD
Sbjct:   338 KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATD 397

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERD 168
             VA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    +  R L + 
Sbjct:   398 VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKV 457

Query:   169 VGCKFEFVSPPVVE 182
             +    + ++P +++
Sbjct:   458 LEEANQAINPKLMQ 471


>MGI|MGI:1914290 [details] [associations]
            symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003713 "transcription coactivator activity" evidence=ISO]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0009791
            "post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
            evidence=ISO] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0072358 "cardiovascular system
            development" evidence=IMP] [GO:2001014 "regulation of skeletal
            muscle cell differentiation" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
            GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
            GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
            ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
            EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
            RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
            UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
            IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
            REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
            GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
            InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
            CleanEx:MM_DDX17 Genevestigator:Q501J6
            GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
        Length = 650

 Score = 254 (94.5 bits), Expect = 1.7e-19, P = 1.7e-19
 Identities = 52/134 (38%), Positives = 82/134 (61%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTI+F +TKR  D+++  +      +  +HGD SQ +R+  LN FR GK  +L+ATD
Sbjct:   338 KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATD 397

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERD 168
             VA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    +  R L + 
Sbjct:   398 VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKV 457

Query:   169 VGCKFEFVSPPVVE 182
             +    + ++P +++
Sbjct:   458 LEEANQAINPKLMQ 471


>UNIPROTKB|E9PT29 [details] [associations]
            symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
            norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
            PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
        Length = 651

 Score = 254 (94.5 bits), Expect = 1.7e-19, P = 1.7e-19
 Identities = 52/134 (38%), Positives = 82/134 (61%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTI+F +TKR  D+++  +      +  +HGD SQ +R+  LN FR GK  +L+ATD
Sbjct:   337 KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATD 396

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERD 168
             VA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    +  R L + 
Sbjct:   397 VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKV 456

Query:   169 VGCKFEFVSPPVVE 182
             +    + ++P +++
Sbjct:   457 LEEANQAINPKLMQ 470


>FB|FBgn0263231 [details] [associations]
            symbol:bel "belle" species:7227 "Drosophila melanogaster"
            [GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
            "spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
            development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
            [GO:0016442 "RNA-induced silencing complex" evidence=IDA]
            [GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
            particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
            "regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
            sister chromatid segregation" evidence=IMP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
            GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
            GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
            GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
            RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
            SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
            EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
            UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
            OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
            NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
        Length = 798

 Score = 255 (94.8 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 71/190 (37%), Positives = 100/190 (52%)

Query:     3 NYFVMFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITV------YAKGGKTIV 56
             NY  +F    +VG+  E + + I L+        KR+ L DL++       Y K   T++
Sbjct:   511 NY--IFLAVGRVGSTSENITQTI-LWVYEP---DKRSYLLDLLSSIRDGPEYTKDSLTLI 564

Query:    57 FTQTKRDADEVSLALTSIIAS-EALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLD 115
             F +TK+ AD +   L        ++HGD +Q +RE  L  FR G   +LVAT VAARGLD
Sbjct:   565 FVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLD 624

Query:   116 IPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL-ERDVGCKFE 174
             IP+V  +I+++LP+D E +VHR GRTGR G  G A   F    R     L E  +  K E
Sbjct:   625 IPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEKNRNICSDLLELLIETKQE 684

Query:   175 FVSPPVVEDV 184
                P  +ED+
Sbjct:   685 I--PSFMEDM 692


>WB|WBGene00018007 [details] [associations]
            symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0009790 "embryo development"
            evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
            "cell division" evidence=IMP] [GO:0000910 "cytokinesis"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0018996 "molting
            cycle, collagen and cuticulin-based cuticle" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
            GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
            EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
            ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
            MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
            EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
            KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
            WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
        Length = 399

 Score = 248 (92.4 bits), Expect = 2.1e-19, P = 2.1e-19
 Identities = 56/171 (32%), Positives = 93/171 (54%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             +DE   EGIK + ++      K   L DL        + ++F  T+R  D ++  +    
Sbjct:   231 RDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTIT-QAVLFCNTRRKVDWLTDKMKEAN 289

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ++HGD+ Q  R+  +  FR G   VL++TDV ARGLD+P V L+I+Y+LPN+ E +
Sbjct:   290 FTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELY 349

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR+GR G++G AI        R +R +E+    + + + P  + D++
Sbjct:   350 IHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDEM-PMNIADII 399


>WB|WBGene00022029 [details] [associations]
            symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
            "growth" evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] [GO:0018996 "molting cycle, collagen and
            cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0042127 "regulation of cell proliferation" evidence=IMP]
            [GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
            cell development" evidence=IMP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
            GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
            GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
            RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
            STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
            KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
            InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
        Length = 399

 Score = 248 (92.4 bits), Expect = 2.1e-19, P = 2.1e-19
 Identities = 56/171 (32%), Positives = 93/171 (54%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             +DE   EGIK + ++      K   L DL        + ++F  T+R  D ++  +    
Sbjct:   231 RDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTIT-QAVLFCNTRRKVDWLTDKMKEAN 289

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ++HGD+ Q  R+  +  FR G   VL++TDV ARGLD+P V L+I+Y+LPN+ E +
Sbjct:   290 FTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELY 349

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR+GR G++G AI        R +R +E+    + + + P  + D++
Sbjct:   350 IHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDEM-PMNIADII 399


>SGD|S000005056 [details] [associations]
            symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
            protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
            "nuclear polyadenylation-dependent mRNA catabolic process"
            evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
            ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
            evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
            "rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003724 "RNA helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
            GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
            OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
            RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
            SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
            STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
            GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
            CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
            Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
        Length = 546

 Score = 252 (93.8 bits), Expect = 2.1e-19, P = 2.1e-19
 Identities = 55/150 (36%), Positives = 86/150 (57%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGG--KTIVFTQTKRDADEVSLA 70
             QVG+ +   +  I       +   KR  L+  +   ++    KT++F  TKR  D+++  
Sbjct:   320 QVGSLELSASHNITQIVEVVSDFEKRDRLNKYLETASQDNEYKTLIFASTKRMCDDITKY 379

Query:    71 LTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPN 129
             L      + A+HGD  Q +R+  L  FR G+  ++VATDVAARG+D+  ++ +I+Y++P 
Sbjct:   380 LREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPG 439

Query:   130 DPETFVHRSGRTGRAGKEGTAILMFTSSQR 159
             + E +VHR GRTGRAG  GTAI  FT   +
Sbjct:   440 NIEDYVHRIGRTGRAGATGTAISFFTEQNK 469


>UNIPROTKB|Q92841 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0003713 "transcription coactivator activity" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0033148 "positive
            regulation of intracellular estrogen receptor signaling pathway"
            evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
            skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
            "protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
            evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
            EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
            GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
            EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
            IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
            RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
            ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
            MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
            REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
            DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
            UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
            HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
            HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
            GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
            CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
            GO:GO:2001014 Uniprot:Q92841
        Length = 729

 Score = 254 (94.5 bits), Expect = 2.2e-19, P = 2.2e-19
 Identities = 52/134 (38%), Positives = 82/134 (61%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTI+F +TKR  D+++  +      +  +HGD SQ +R+  LN FR GK  +L+ATD
Sbjct:   417 KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATD 476

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERD 168
             VA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    +  R L + 
Sbjct:   477 VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKV 536

Query:   169 VGCKFEFVSPPVVE 182
             +    + ++P +++
Sbjct:   537 LEEANQAINPKLMQ 550


>UNIPROTKB|H3BLZ8 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
            "post-embryonic development" evidence=IEA] [GO:0072358
            "cardiovascular system development" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
            ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
            Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
        Length = 731

 Score = 254 (94.5 bits), Expect = 2.2e-19, P = 2.2e-19
 Identities = 52/134 (38%), Positives = 82/134 (61%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTI+F +TKR  D+++  +      +  +HGD SQ +R+  LN FR GK  +L+ATD
Sbjct:   417 KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATD 476

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERD 168
             VA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    +  R L + 
Sbjct:   477 VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKV 536

Query:   169 VGCKFEFVSPPVVE 182
             +    + ++P +++
Sbjct:   537 LEEANQAINPKLMQ 550


>UNIPROTKB|F1PID8 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
            Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
        Length = 736

 Score = 254 (94.5 bits), Expect = 2.2e-19, P = 2.2e-19
 Identities = 52/134 (38%), Positives = 82/134 (61%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTI+F +TKR  D+++  +      +  +HGD SQ +R+  LN FR GK  +L+ATD
Sbjct:   419 KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATD 478

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERD 168
             VA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    +  R L + 
Sbjct:   479 VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKV 538

Query:   169 VGCKFEFVSPPVVE 182
             +    + ++P +++
Sbjct:   539 LEEANQAINPKLMQ 552


>UNIPROTKB|F1SKQ0 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0072358 "cardiovascular system development"
            evidence=IEA] [GO:0009791 "post-embryonic development"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
            EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
        Length = 736

 Score = 254 (94.5 bits), Expect = 2.2e-19, P = 2.2e-19
 Identities = 52/134 (38%), Positives = 82/134 (61%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTI+F +TKR  D+++  +      +  +HGD SQ +R+  LN FR GK  +L+ATD
Sbjct:   419 KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATD 478

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERD 168
             VA+RGLD+ +V  +I+Y+ PN  E +VHR GRT R+  +GTA   FT    +  R L + 
Sbjct:   479 VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKV 538

Query:   169 VGCKFEFVSPPVVE 182
             +    + ++P +++
Sbjct:   539 LEEANQAINPKLMQ 552


>UNIPROTKB|Q3SZ54 [details] [associations]
            symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
            species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
            IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
            ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
            Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
            InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
            NextBio:20866906 Uniprot:Q3SZ54
        Length = 406

 Score = 248 (92.4 bits), Expect = 2.3e-19, P = 2.3e-19
 Identities = 57/171 (33%), Positives = 93/171 (54%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGI+ + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   238 KEELTLEGIRQFYINVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARD 296

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 A+HGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   297 FTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 356

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR GR G++G AI M T   +RT+R +E       E + P  V D++
Sbjct:   357 IHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM-PLNVADLI 406


>UNIPROTKB|F1P895 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
            EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
            Uniprot:F1P895
        Length = 406

 Score = 248 (92.4 bits), Expect = 2.3e-19, P = 2.3e-19
 Identities = 57/171 (33%), Positives = 93/171 (54%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGI+ + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   238 KEELTLEGIRQFYINVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARD 296

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 A+HGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   297 FTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 356

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR GR G++G AI M T   +RT+R +E       E + P  V D++
Sbjct:   357 IHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM-PLNVADLI 406


>UNIPROTKB|J9NY67 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
            EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
            ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
            GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
        Length = 406

 Score = 248 (92.4 bits), Expect = 2.3e-19, P = 2.3e-19
 Identities = 57/171 (33%), Positives = 93/171 (54%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGI+ + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   238 KEELTLEGIRQFYINVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARD 296

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 A+HGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   297 FTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 356

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR GR G++G AI M T   +RT+R +E       E + P  V D++
Sbjct:   357 IHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM-PLNVADLI 406


>UNIPROTKB|P60842 [details] [associations]
            symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
            "mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
            evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
            [GO:0008135 "translation factor activity, nucleic acid binding"
            evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
            4F complex" evidence=TAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
            process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
            "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
            evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
            [GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
            pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
            process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
            Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
            Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
            Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
            GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
            GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
            OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
            EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
            EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
            RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
            PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
            ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
            MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
            PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
            Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
            GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
            neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
            EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
            ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
            Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
            Uniprot:P60842
        Length = 406

 Score = 248 (92.4 bits), Expect = 2.3e-19, P = 2.3e-19
 Identities = 57/171 (33%), Positives = 93/171 (54%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGI+ + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   238 KEELTLEGIRQFYINVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARD 296

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 A+HGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   297 FTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 356

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR GR G++G AI M T   +RT+R +E       E + P  V D++
Sbjct:   357 IHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM-PLNVADLI 406


>UNIPROTKB|A6M928 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
            OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
            UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
            Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
            Uniprot:A6M928
        Length = 406

 Score = 248 (92.4 bits), Expect = 2.3e-19, P = 2.3e-19
 Identities = 57/171 (33%), Positives = 93/171 (54%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGI+ + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   238 KEELTLEGIRQFYINVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARD 296

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 A+HGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   297 FTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 356

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR GR G++G AI M T   +RT+R +E       E + P  V D++
Sbjct:   357 IHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM-PLNVADLI 406


>MGI|MGI:95303 [details] [associations]
            symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
            initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
            KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
            EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
            EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
            PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
            UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
            MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
            REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
            Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
            InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
            Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
        Length = 406

 Score = 248 (92.4 bits), Expect = 2.3e-19, P = 2.3e-19
 Identities = 57/171 (33%), Positives = 93/171 (54%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGI+ + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   238 KEELTLEGIRQFYINVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARD 296

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 A+HGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   297 FTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 356

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR GR G++G AI M T   +RT+R +E       E + P  V D++
Sbjct:   357 IHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM-PLNVADLI 406


>UNIPROTKB|Q6P3V8 [details] [associations]
            symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
            norvegicus" [GO:0003743 "translation initiation factor activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
            GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
            OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
            UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
            Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
            InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
            Uniprot:Q6P3V8
        Length = 406

 Score = 248 (92.4 bits), Expect = 2.3e-19, P = 2.3e-19
 Identities = 57/171 (33%), Positives = 93/171 (54%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGI+ + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   238 KEELTLEGIRQFYINVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARD 296

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 A+HGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   297 FTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 356

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR GR G++G AI M T   +RT+R +E       E + P  V D++
Sbjct:   357 IHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM-PLNVADLI 406


>UNIPROTKB|Q4R6M5 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
            activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
            "estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=ISS]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
            cell differentiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
            GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
            HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
            Uniprot:Q4R6M5
        Length = 614

 Score = 252 (93.8 bits), Expect = 2.9e-19, P = 2.9e-19
 Identities = 52/117 (44%), Positives = 73/117 (62%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTIVF +TKR  DE++  +      +  +HGD SQ +R   LN F+ GK  +L+ATD
Sbjct:   340 KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERGWVLNEFKHGKAPILIATD 399

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             VA+RGLD+ +V  +I+Y+ PN  E ++HR GRT R+ K GTA   FT +  + V  L
Sbjct:   400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456


>UNIPROTKB|J9NU36 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
            EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
        Length = 423

 Score = 248 (92.4 bits), Expect = 2.9e-19, P = 2.9e-19
 Identities = 57/171 (33%), Positives = 93/171 (54%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGI+ + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   255 KEELTLEGIRQFYINVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARD 313

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 A+HGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   314 FTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 373

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR GR G++G AI M T   +RT+R +E       E + P  V D++
Sbjct:   374 IHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM-PLNVADLI 423


>UNIPROTKB|Q3MSQ8 [details] [associations]
            symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
            evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
            ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
        Length = 724

 Score = 253 (94.1 bits), Expect = 3.0e-19, P = 3.0e-19
 Identities = 58/140 (41%), Positives = 86/140 (61%)

Query:    53 KTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAA 111
             +T+VF +TK+ AD ++  L    + S ++HGD  Q +RE  L  FR G+  V+VAT VAA
Sbjct:   540 RTMVFVKTKKKADFIATFLCQEKVPSTSIHGDREQKERETALRDFRTGQCPVIVATSVAA 599

Query:   112 RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS---SQRRTVRSLERD 168
             RGLDI NV  +I++++P+D + +VHR GRTGR G  G AI  F      ++R  RSL + 
Sbjct:   600 RGLDIENVSYVINFDIPDDIDEYVHRIGRTGRCGNTGRAISFFDKRGDDEQRIARSLVKV 659

Query:   169 VGCKFEFVSPPVVEDVLESS 188
             +    + V P  +E+V  S+
Sbjct:   660 LSDAHQEV-PAWLEEVAFSA 678


>ZFIN|ZDB-GENE-040120-6 [details] [associations]
            symbol:eif4a1b "eukaryotic translation initiation
            factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
            IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
            SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
        Length = 429

 Score = 248 (92.4 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 54/152 (35%), Positives = 85/152 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGI+ + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   261 KEELTLEGIRQFYINVEKEEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARD 319

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ALHGD+ Q  R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   320 FTVSALHGDMDQKDRDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 379

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 166
             +HR GR GR G++G AI M T   +RT+R +E
Sbjct:   380 IHRIGRGGRFGRKGVAINMVTEDDKRTLRDIE 411


>UNIPROTKB|Q9NXZ2 [details] [associations]
            symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
            species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
            HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
            IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
            ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
            PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
            Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
            CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
            HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
            InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
            ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
            Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
            GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
        Length = 648

 Score = 252 (93.8 bits), Expect = 3.2e-19, P = 3.2e-19
 Identities = 57/153 (37%), Positives = 82/153 (53%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT- 72
             VG  D      +K   I TT   K + +   +   +   K IVF   K  AD +S  L  
Sbjct:   450 VGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLIL 509

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
               I+ E+LHGD  Q  RE+ L  F+ GK  +L+ATD+A+RGLD+ +V  + +++ P + E
Sbjct:   510 GNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIE 569

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
              +VHR GRTGRAG+ G +I   T +  R    L
Sbjct:   570 EYVHRIGRTGRAGRTGVSITTLTRNDWRVASEL 602


>DICTYBASE|DDB_G0269192 [details] [associations]
            symbol:tifA "eukaryotic translation initiation factor
            4A" species:44689 "Dictyostelium discoideum" [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
            "translational initiation" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
            EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
            SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
            KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
        Length = 405

 Score = 247 (92.0 bits), Expect = 3.2e-19, P = 3.2e-19
 Identities = 53/153 (34%), Positives = 88/153 (57%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSII 75
             +DE   +GIK + +S      K   L D+        + ++F  TK+  D+++  +    
Sbjct:   237 RDELTLDGIKQFFVSVEKEDWKFGTLCDIYDSLTIT-QAVIFCNTKKKVDQLTEQMRDAN 295

Query:    76 ASEA-LHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
              + A +HGD+ Q +RE  +  FR G+  VL+ TD+ ARG+D+  V L+I+Y+LP D E +
Sbjct:   296 FTVASMHGDMVQKEREEIIKSFRSGENRVLITTDILARGIDVQQVSLVINYDLPIDRENY 355

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLER 167
             +HR GR+GR G++G AI    +S  R +R +E+
Sbjct:   356 IHRIGRSGRFGRKGVAINFVKNSDIRILRDIEQ 388


>TIGR_CMR|BA_4509 [details] [associations]
            symbol:BA_4509 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268806 OMA:YAHVEPK HSSP:P10081
            RefSeq:NP_846734.1 RefSeq:YP_021153.1 RefSeq:YP_030436.1
            ProteinModelPortal:Q81LV0 SMR:Q81LV0
            EnsemblBacteria:EBBACT00000013143 EnsemblBacteria:EBBACT00000016547
            EnsemblBacteria:EBBACT00000022918 GeneID:1088235 GeneID:2818505
            GeneID:2850064 KEGG:ban:BA_4509 KEGG:bar:GBAA_4509 KEGG:bat:BAS4187
            ProtClustDB:CLSK887589 BioCyc:BANT260799:GJAJ-4244-MONOMER
            BioCyc:BANT261594:GJ7F-4386-MONOMER Uniprot:Q81LV0
        Length = 436

 Score = 248 (92.4 bits), Expect = 3.3e-19, P = 3.3e-19
 Identities = 55/162 (33%), Positives = 93/162 (57%)

Query:    16 NQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             N  +  A  I+ Y + +   +K  +++ ++  + K    +VFT TK+ AD+V+  L    
Sbjct:   212 NPKQVAAGNIEHYLVPSKHRNKIDLVNKMLLQF-KPYLAVVFTNTKKMADQVADGLMERG 270

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
             +    +HGD+S   R++ +   R  +F  +VATD+AARG+DI  +  +I+YELP+D + F
Sbjct:   271 LKVGRIHGDLSPRDRKKMMKQIRDLEFQYIVATDLAARGIDIEGISHVINYELPSDLDFF 330

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFV 176
             VHR GRT RAG  G A+ ++  +    + SLE+    +F+ V
Sbjct:   331 VHRVGRTARAGHSGIAVTIYDPANEEALDSLEKQRHIEFKHV 372


>UNIPROTKB|D4ADV9 [details] [associations]
            symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
            Uniprot:D4ADV9
        Length = 674

 Score = 252 (93.8 bits), Expect = 3.5e-19, P = 3.5e-19
 Identities = 63/155 (40%), Positives = 92/155 (59%)

Query:    36 SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLN 94
             SKR  L +++       +T+VF +TK+ AD ++  L    I++ ++HGD  Q +RE+ L 
Sbjct:   500 SKREKLVEILRNIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALG 558

Query:    95 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 154
              FR GK  VLVAT VAARGLDI NV  +I+++LP+  + +VHR GRTGR G  G AI  F
Sbjct:   559 DFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFF 618

Query:   155 -TSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESS 188
              T S     + L + +    + V P  +E++  SS
Sbjct:   619 DTESDNHLAQPLVKVLSDAQQDV-PAWLEEIAFSS 652


>UNIPROTKB|Q81QF0 [details] [associations]
            symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:1392 "Bacillus anthracis" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
            RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
            DNASU:1085525 EnsemblBacteria:EBBACT00000011128
            EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
            GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
            KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
            ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
            BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
        Length = 450

 Score = 248 (92.4 bits), Expect = 3.8e-19, P = 3.8e-19
 Identities = 59/173 (34%), Positives = 94/173 (54%)

Query:    18 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIAS 77
             +E   + I+   I TT  +K   L   +    +    ++F +TK  A ++   L  +  +
Sbjct:   212 EEVTVDTIEQRVIETTDRAKPDALR-FVMDRDQPFLAVIFCRTKVRASKLYDNLKGLGYN 270

Query:    78 EA-LHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 136
              A LHGDI Q +RER +  FR+ K   L+ATDVAARGLD+  V  + +Y++P D E+++H
Sbjct:   271 CAELHGDIPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIH 330

Query:   137 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKF--EFVSPPVVEDVLES 187
             R GRTGRAG  G AI    +   + +  +E+ +G     E +  P ++ V E+
Sbjct:   331 RIGRTGRAGGSGLAITFVAAKDEKHLEEIEKTLGAPIQREIIEQPKIKRVDEN 383


>TIGR_CMR|BA_2475 [details] [associations]
            symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
            RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
            DNASU:1085525 EnsemblBacteria:EBBACT00000011128
            EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
            GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
            KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
            ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
            BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
        Length = 450

 Score = 248 (92.4 bits), Expect = 3.8e-19, P = 3.8e-19
 Identities = 59/173 (34%), Positives = 94/173 (54%)

Query:    18 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIAS 77
             +E   + I+   I TT  +K   L   +    +    ++F +TK  A ++   L  +  +
Sbjct:   212 EEVTVDTIEQRVIETTDRAKPDALR-FVMDRDQPFLAVIFCRTKVRASKLYDNLKGLGYN 270

Query:    78 EA-LHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 136
              A LHGDI Q +RER +  FR+ K   L+ATDVAARGLD+  V  + +Y++P D E+++H
Sbjct:   271 CAELHGDIPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIH 330

Query:   137 RSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKF--EFVSPPVVEDVLES 187
             R GRTGRAG  G AI    +   + +  +E+ +G     E +  P ++ V E+
Sbjct:   331 RIGRTGRAGGSGLAITFVAAKDEKHLEEIEKTLGAPIQREIIEQPKIKRVDEN 383


>ZFIN|ZDB-GENE-990415-272 [details] [associations]
            symbol:vasa "vasa homolog" species:7955 "Danio
            rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
            EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
            ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
            GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
            NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
        Length = 716

 Score = 252 (93.8 bits), Expect = 3.9e-19, P = 3.9e-19
 Identities = 63/156 (40%), Positives = 93/156 (59%)

Query:    36 SKRTILSDLITVYAKGG-KTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTL 93
             SKR  L +L+   A G  +T+VF +TKR AD ++  L    I++ ++HGD  Q +RE+ L
Sbjct:   515 SKRDQLLELLR--ATGNERTMVFVETKRSADFIATFLCQEKISTTSIHGDREQREREKAL 572

Query:    94 NGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILM 153
             + FR G   VLVAT VAARGLDI  V  ++++++P+  + +VHR GRTGR G  G A+  
Sbjct:   573 SDFRLGHCPVLVATSVAARGLDIEQVQHVVNFDMPSSIDEYVHRIGRTGRCGNTGRAVSF 632

Query:   154 FT-SSQRRTVRSLERDVGCKFEFVSPPVVEDVLESS 188
             F   S     RSL + +    + V P  +E+V  S+
Sbjct:   633 FNPESDTPLARSLVKVLSGAQQVV-PKWLEEVAFSA 667


>DICTYBASE|DDB_G0280147 [details] [associations]
            symbol:ddx47 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
            GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
            EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
            RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
            EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
            Uniprot:Q54VT4
        Length = 546

 Score = 250 (93.1 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 49/106 (46%), Positives = 75/106 (70%)

Query:    51 GGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDV 109
             G  TI+FT T   + ++++ L ++   +  ++GD+ Q +R  +LN F+QG  ++LVATDV
Sbjct:   358 GNLTIIFTSTCASSTKIAMMLRNLGFGAIPINGDMDQGKRLASLNKFKQGTKSILVATDV 417

Query:   110 AARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 155
             AARGLDIP+VDL+I+Y++P + + +VHR GRT RAG  G AI + T
Sbjct:   418 AARGLDIPSVDLVINYDVPTNSKEYVHRVGRTARAGNSGRAITIVT 463


>TIGR_CMR|BA_2109 [details] [associations]
            symbol:BA_2109 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 OMA:MMAINTI HSSP:P10081 HOGENOM:HOG000268811
            RefSeq:NP_844507.1 RefSeq:YP_018751.1 RefSeq:YP_028224.1
            ProteinModelPortal:Q81RE0 DNASU:1085806
            EnsemblBacteria:EBBACT00000011412 EnsemblBacteria:EBBACT00000014072
            EnsemblBacteria:EBBACT00000023039 GeneID:1085806 GeneID:2818618
            GeneID:2851363 KEGG:ban:BA_2109 KEGG:bar:GBAA_2109 KEGG:bat:BAS1961
            ProtClustDB:CLSK886848 BioCyc:BANT260799:GJAJ-2029-MONOMER
            BioCyc:BANT261594:GJ7F-2106-MONOMER Uniprot:Q81RE0
        Length = 389

 Score = 245 (91.3 bits), Expect = 4.5e-19, P = 4.5e-19
 Identities = 48/122 (39%), Positives = 74/122 (60%)

Query:    53 KTIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAA 111
             K + F       DE++  L    + + ALH + S+ +RE T+  FR GK  +L+ATD+AA
Sbjct:   236 KAVAFLNDPFRLDEITEKLKFRKMKAAALHAEASKQEREATMRAFRGGKLEILLATDIAA 295

Query:   112 RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGC 171
             RG+DI ++  +IH ELP+  + ++HRSGRTGR GKEGT + + T  + R +    + +G 
Sbjct:   296 RGIDIDDLTHVIHLELPDTVDQYIHRSGRTGRMGKEGTVVSLVTPQEERKLLQFAKKLGI 355

Query:   172 KF 173
              F
Sbjct:   356 VF 357


>DICTYBASE|DDB_G0293064 [details] [associations]
            symbol:DDB_G0293064 species:44689 "Dictyostelium
            discoideum" [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
            RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
            EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
            InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
        Length = 573

 Score = 250 (93.1 bits), Expect = 4.5e-19, P = 4.5e-19
 Identities = 55/145 (37%), Positives = 86/145 (59%)

Query:    13 QVGNQDEKLAEGI--KLYAISTTATSKRTILSDLITVYAKGGK--TIVFTQTKRDADEVS 68
             Q+G+      + I  K   + T A     ++  L  +Y+   K  T++FT TK+ AD + 
Sbjct:   346 QIGSSQLTANKNISQKFKIVPTDADKVDALMDTLGEIYSADEKAQTLIFTMTKKGADTLK 405

Query:    69 LALTSI---IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
               + S    +  + LHGD+ Q++RER +  F+  +  ++VATDVA+RGLDI  +  +I++
Sbjct:   406 HYIQSNGDNVRIDTLHGDVDQNRRERIVQDFKNKRLDIVVATDVASRGLDIKGISHVINF 465

Query:   126 ELPNDPETFVHRSGRTGRAGKEGTA 150
              LP+D ET+VHR GRTGRAG  GT+
Sbjct:   466 SLPSDCETYVHRIGRTGRAGALGTS 490


>POMBASE|SPAC1006.07 [details] [associations]
            symbol:SPAC1006.07 "translation initiation factor eIF4A
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
            "cytoplasmic translational initiation" evidence=NAS] [GO:0003743
            "translation initiation factor activity" evidence=ISO] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
            "ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
            "eukaryotic translation initiation factor 4F complex" evidence=ISO]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
            EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
            EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
            ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
            EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
            OMA:PILEMED NextBio:20803983 Uniprot:P47943
        Length = 392

 Score = 245 (91.3 bits), Expect = 4.7e-19, P = 4.7e-19
 Identities = 57/172 (33%), Positives = 95/172 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLI-TVYAKGGKTIVFTQTKRDADEVSLALTSI 74
             +DE   EGIK + ++      K   L DL  TV     + ++F  T+R  D ++  LT  
Sbjct:   224 KDELTLEGIKQFYVAVEKEEWKLDTLCDLYETVTVT--QAVIFCNTRRKVDWLTEQLTER 281

Query:    75 -IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 133
                  ++HGD+ Q QR+  ++ FR G   +L+ TD+ ARG+D+  V L+I+Y+LP + E 
Sbjct:   282 DFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLPANREN 341

Query:   134 FVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             ++HR GR GR G++G +I   T+   R +R +E+      E + P  + D++
Sbjct:   342 YIHRIGRGGRFGRKGVSINFVTNDDVRMMREIEQFYNTHIEEM-PMNIADLI 392


>UNIPROTKB|Q47Z59 [details] [associations]
            symbol:CPS_3215 "Putative ATP-dependent RNA helicase SrmB"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0042254
            "ribosome biogenesis" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
            STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
            OMA:PKFIVAT ProtClustDB:CLSK869483
            BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
        Length = 448

 Score = 247 (92.0 bits), Expect = 5.2e-19, P = 5.2e-19
 Identities = 53/151 (35%), Positives = 90/151 (59%)

Query:    26 KLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDI 84
             K + ++   T K  +L   + V  K  + I+FT T+ D D ++  LT   + + AL G++
Sbjct:   222 KRFYLADNLTQKEALLQHFL-VTEKSQQIIIFTATRSDTDRLAKLLTEQNLNAVALSGEL 280

Query:    85 SQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRA 144
             +Q QR + +  F +G+  +LV TD+A+RGLD+ NV  +I++++P   E FVHR GRTGRA
Sbjct:   281 NQGQRNQIMESFSKGQHKILVTTDLASRGLDLINVSHVINFDMPKHTEEFVHRIGRTGRA 340

Query:   145 GKEGTAILMFTSSQRRTVRSLERDVGCKFEF 175
             G +G AI +   +   +++++E  +  K  F
Sbjct:   341 GTKGDAISLVGPNDWLSLKNVEAFLQQKISF 371


>TIGR_CMR|CPS_3215 [details] [associations]
            symbol:CPS_3215 "putative ATP-dependent RNA helicase SrmB"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
            "RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
            biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
            STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
            OMA:PKFIVAT ProtClustDB:CLSK869483
            BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
        Length = 448

 Score = 247 (92.0 bits), Expect = 5.2e-19, P = 5.2e-19
 Identities = 53/151 (35%), Positives = 90/151 (59%)

Query:    26 KLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDI 84
             K + ++   T K  +L   + V  K  + I+FT T+ D D ++  LT   + + AL G++
Sbjct:   222 KRFYLADNLTQKEALLQHFL-VTEKSQQIIIFTATRSDTDRLAKLLTEQNLNAVALSGEL 280

Query:    85 SQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRA 144
             +Q QR + +  F +G+  +LV TD+A+RGLD+ NV  +I++++P   E FVHR GRTGRA
Sbjct:   281 NQGQRNQIMESFSKGQHKILVTTDLASRGLDLINVSHVINFDMPKHTEEFVHRIGRTGRA 340

Query:   145 GKEGTAILMFTSSQRRTVRSLERDVGCKFEF 175
             G +G AI +   +   +++++E  +  K  F
Sbjct:   341 GTKGDAISLVGPNDWLSLKNVEAFLQQKISF 371


>UNIPROTKB|Q485I3 [details] [associations]
            symbol:dbpA "ATP-dependent RNA helicase DbpA"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
            InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
            ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
            KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
            BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
        Length = 468

 Score = 239 (89.2 bits), Expect = 5.8e-19, Sum P(2) = 5.8e-19
 Identities = 52/114 (45%), Positives = 71/114 (62%)

Query:    54 TIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAAR 112
             T +F  TK++  +V+ AL     +  ALHGD+ Q  R++TL  F     ++LVATDVAAR
Sbjct:   252 TAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILVATDVAAR 311

Query:   113 GLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 166
             GLDI ++DL+I+Y +  D E  VHR GRTGRAG  G A  +F+  +   V  LE
Sbjct:   312 GLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAYSLFSDKESYKVGLLE 365

 Score = 45 (20.9 bits), Expect = 5.8e-19, Sum P(2) = 5.8e-19
 Identities = 16/88 (18%), Positives = 40/88 (45%)

Query:   236 PPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDR 295
             P  S +++++E+    +   +     +  + A  ++G L+        ++GKI ++ D++
Sbjct:   376 PLPSLAVLSNERPQAKMATIQIDGGKKQKVRAGDILGALTGDNGVQGSQVGKISVL-DNK 434

Query:   296 VQGAVFDLPEEIAKELLNKQIPPGNTIS 323
                AV      +A + ++K    G T +
Sbjct:   435 AYVAVTKAALNLALKKISKGKMKGRTFN 462


>TIGR_CMR|CPS_1540 [details] [associations]
            symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
            activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
            InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
            ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
            KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
            BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
        Length = 468

 Score = 239 (89.2 bits), Expect = 5.8e-19, Sum P(2) = 5.8e-19
 Identities = 52/114 (45%), Positives = 71/114 (62%)

Query:    54 TIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAAR 112
             T +F  TK++  +V+ AL     +  ALHGD+ Q  R++TL  F     ++LVATDVAAR
Sbjct:   252 TAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILVATDVAAR 311

Query:   113 GLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 166
             GLDI ++DL+I+Y +  D E  VHR GRTGRAG  G A  +F+  +   V  LE
Sbjct:   312 GLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAYSLFSDKESYKVGLLE 365

 Score = 45 (20.9 bits), Expect = 5.8e-19, Sum P(2) = 5.8e-19
 Identities = 16/88 (18%), Positives = 40/88 (45%)

Query:   236 PPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDR 295
             P  S +++++E+    +   +     +  + A  ++G L+        ++GKI ++ D++
Sbjct:   376 PLPSLAVLSNERPQAKMATIQIDGGKKQKVRAGDILGALTGDNGVQGSQVGKISVL-DNK 434

Query:   296 VQGAVFDLPEEIAKELLNKQIPPGNTIS 323
                AV      +A + ++K    G T +
Sbjct:   435 AYVAVTKAALNLALKKISKGKMKGRTFN 462


>SGD|S000001212 [details] [associations]
            symbol:DBP8 "ATPase, putative RNA helicase" species:4932
            "Saccharomyces cerevisiae" [GO:0030686 "90S preribosome"
            evidence=IDA] [GO:0000472 "endonucleolytic cleavage to generate
            mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006364 "rRNA processing" evidence=IEA] [GO:0000447
            "endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
            rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
            rRNA, LSU-rRNA)" evidence=IMP] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IMP] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
            tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
            [GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000001212 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:U00027 GO:GO:0030686
            GO:GO:0004004 GO:GO:0000447 GO:GO:0000472 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 KO:K14778 HOGENOM:HOG000268802
            OrthoDB:EOG4PP1RW PIR:S48908 RefSeq:NP_012039.1
            ProteinModelPortal:P38719 SMR:P38719 DIP:DIP-5628N IntAct:P38719
            MINT:MINT-485349 STRING:P38719 PaxDb:P38719 PeptideAtlas:P38719
            EnsemblFungi:YHR169W GeneID:856574 KEGG:sce:YHR169W CYGD:YHR169w
            GeneTree:ENSGT00700000105515 OMA:FRNLCAI NextBio:982426
            Genevestigator:P38719 GermOnline:YHR169W GO:GO:0000480
            Uniprot:P38719
        Length = 431

 Score = 246 (91.7 bits), Expect = 5.9e-19, P = 5.9e-19
 Identities = 56/163 (34%), Positives = 89/163 (54%)

Query:    13 QVGNQDE-KLAEGIKLYAISTTATSKRTILSDLITVYAKGGKT-IVFTQTKRDADEVSLA 70
             QV + D   +   +K+  I      K   L  L+T      KT I+F      A+ +   
Sbjct:   214 QVESVDNVAIPSTLKIEYILVPEHVKEAYLYQLLTCEEYENKTAIIFVNRTMTAEILRRT 273

Query:    71 LTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPN 129
             L  + +   +LH  + Q +R  +L+ FR     +L+ATDVA+RGLDIP V+L+++Y++P+
Sbjct:   274 LKQLEVRVASLHSQMPQQERTNSLHRFRANAARILIATDVASRGLDIPTVELVVNYDIPS 333

Query:   130 DPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCK 172
             DP+ F+HRSGRT RAG+ G AI   T      ++++E  +  K
Sbjct:   334 DPDVFIHRSGRTARAGRIGDAISFVTQRDVSRIQAIEDRINKK 376


>UNIPROTKB|E1BII7 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
            EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
            Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
        Length = 647

 Score = 250 (93.1 bits), Expect = 5.9e-19, P = 5.9e-19
 Identities = 65/182 (35%), Positives = 96/182 (52%)

Query:    14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLAL-T 72
             VG  D      +    I TT   KR+ +   I   +   K I+F   K  AD +S  L  
Sbjct:   449 VGTLDLVAVSTVTQNIIVTTEDEKRSHIQAFIDSMSPKDKVIIFVSRKAVADHLSSDLGI 508

Query:    73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
               I+ E+LHG+  Q  RER L  F+ GK  +L+ATD+A+RGLD+ +V  + +Y+ P + E
Sbjct:   509 RRISVESLHGNREQSDRERALKSFKTGKVRILIATDLASRGLDVHDVTHVYNYDFPRNIE 568

Query:   133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
              +VHR GRTGRAG+ G +I + T +  +    L   +    E  +  V ED++ S AE+ 
Sbjct:   569 EYVHRVGRTGRAGRTGVSITLITRNDWKIAGELINIL----ERANQSVPEDLV-SMAERY 623

Query:   193 VA 194
              A
Sbjct:   624 KA 625


>TAIR|locus:2176192 [details] [associations]
            symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
            evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
            evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
            GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
            OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
            RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
            SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
            EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
            GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
            ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
            Uniprot:Q9LU46
        Length = 591

 Score = 238 (88.8 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19
 Identities = 51/147 (34%), Positives = 84/147 (57%)

Query:    55 IVFTQTKRDADEV-SLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 113
             ++F + K D D++    L   + + A+HG   Q  RE  ++ F+ GK  VLVATDVA++G
Sbjct:   401 LIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKG 460

Query:   114 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKF 173
             LD P++  +I+Y++P + E +VHR GRTGR GK G A      +Q  T     + +  + 
Sbjct:   461 LDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEA 520

Query:   174 EFVSPPVVEDVLESSAE-QVVATLNGV 199
             +   PPV+ ++ +   E + +A  +GV
Sbjct:   521 KQRIPPVLAELNDPMEEAETIANASGV 547

 Score = 51 (23.0 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19
 Identities = 8/15 (53%), Positives = 9/15 (60%)

Query:   441 CFNCGKSGHRASECP 455
             C  CG  GHR  +CP
Sbjct:   550 CAYCGGLGHRIRDCP 564


>ASPGD|ASPL0000069536 [details] [associations]
            symbol:AN7424 species:162425 "Emericella nidulans"
            [GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
            from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
            GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
        Length = 488

 Score = 247 (92.0 bits), Expect = 7.0e-19, P = 7.0e-19
 Identities = 55/126 (43%), Positives = 76/126 (60%)

Query:    37 KRTILSDLITVYAKG--GKTIVFTQTKRDADEVSLAL-TSIIASEALHGDISQHQRERTL 93
             K   L  ++  + +G   K + F   K++A  V   L T       +HGD+SQ +R R+L
Sbjct:   307 KEQRLVQILNRHQRGTPDKVLAFCLYKKEAMRVERLLRTKGFKVAGIHGDLSQQERFRSL 366

Query:    94 NGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILM 153
               F+ G  TVLVATDVAARGLDIP+V L+++   P   E +VHR GRTGRAG +G AI +
Sbjct:   367 EAFKSGAATVLVATDVAARGLDIPHVKLVVNVTFPLTVEDYVHRIGRTGRAGADGHAITL 426

Query:   154 FTSSQR 159
             FT + +
Sbjct:   427 FTETDK 432


>DICTYBASE|DDB_G0283661 [details] [associations]
            symbol:ddx3 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
            EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
            SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
            KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
        Length = 712

 Score = 250 (93.1 bits), Expect = 7.2e-19, P = 7.2e-19
 Identities = 51/124 (41%), Positives = 74/124 (59%)

Query:    37 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNG 95
             K + L D ++     G  ++F +TKR  D ++  L      +  +HGD++Q +RE  L  
Sbjct:   490 KNSYLLDYLSGLKSDGLCLIFVETKRSCDTLTYFLNQRNFPTTCIHGDLTQPERENALQS 549

Query:    96 FRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 155
             FR      LVATD+A+RGL I NV+L+I+++LP D   +VHR GRTGRAGK+G AI  F 
Sbjct:   550 FRSFATPFLVATDIASRGLHIGNVNLVINFDLPTDIHIYVHRIGRTGRAGKKGLAISFFN 609

Query:   156 SSQR 159
                +
Sbjct:   610 EKNK 613


>UNIPROTKB|I3LLD5 [details] [associations]
            symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
            Uniprot:I3LLD5
        Length = 401

 Score = 244 (91.0 bits), Expect = 7.5e-19, P = 7.5e-19
 Identities = 56/165 (33%), Positives = 90/165 (54%)

Query:    23 EGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEAL 80
             EGI+ + I+      K   L DL        + ++F  T+R  D ++  + +      A+
Sbjct:   239 EGIRQFYINVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAM 297

Query:    81 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 140
             HGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E ++HR GR
Sbjct:   298 HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGR 357

Query:   141 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
              GR G++G AI M T   +RT+R +E       E + P  V D++
Sbjct:   358 GGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM-PLNVADLI 401


>MGI|MGI:102670 [details] [associations]
            symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
            evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
            [GO:0032880 "regulation of protein localization" evidence=IMP]
            [GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
            part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
            "piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
            GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
            GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
            HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
            EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
            UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
            PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
            REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
            Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
            UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
            CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
            Uniprot:Q61496
        Length = 702

 Score = 249 (92.7 bits), Expect = 9.3e-19, P = 9.3e-19
 Identities = 58/132 (43%), Positives = 81/132 (61%)

Query:    36 SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLN 94
             SKR  L +++       +T+VF +TK+ AD ++  L    I++ ++HGD  Q +RE+ L 
Sbjct:   499 SKREKLVEILRNIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALG 557

Query:    95 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 154
              FR GK  VLVAT VAARGLDI NV  +I+++LP+  + +VHR GRTGR G  G AI  F
Sbjct:   558 DFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFF 617

Query:   155 -TSSQRRTVRSL 165
              T S     + L
Sbjct:   618 DTDSDNHLAQPL 629


>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
            symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
            IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
            Uniprot:F1QQ09
        Length = 473

 Score = 222 (83.2 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
 Identities = 47/140 (33%), Positives = 80/140 (57%)

Query:    55 IVFTQTKRDADEV-SLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 113
             ++F + K D D +    L   + + A+HG   Q +R + +  F++GK  VLVATDVA++G
Sbjct:   287 LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVATDVASKG 346

Query:   114 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKF 173
             LD P +  +++Y++P + E +VHR GRTGR+GK G A          +V    + +  + 
Sbjct:   347 LDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGKTGIATTFINKGCDESVLMDLKALLVEA 406

Query:   174 EFVSPPVVEDVLESSAEQVV 193
             +   PPV++ VL +  E ++
Sbjct:   407 KQKVPPVLQ-VLHTGDETML 425

 Score = 52 (23.4 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query:   441 CFNCGKSGHRASECP 455
             C  CG  GHR ++CP
Sbjct:   433 CTFCGGLGHRITDCP 447

 Score = 44 (20.5 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
 Identities = 13/23 (56%), Positives = 16/23 (69%)

Query:    39 TILS--DLITVYAKG-GKTIVFT 58
             TILS  D+I +   G GKT+VFT
Sbjct:    70 TILSGRDMIGIAFTGSGKTLVFT 92


>UNIPROTKB|B2C6E9 [details] [associations]
            symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
            [GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
        Length = 704

 Score = 248 (92.4 bits), Expect = 1.2e-18, P = 1.2e-18
 Identities = 55/120 (45%), Positives = 78/120 (65%)

Query:    36 SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLN 94
             SKR  L +++    +  +T+VF +TK+ AD ++  L    I++ ++HGD  Q +RE+ L 
Sbjct:   506 SKREKLVEILRNIGEE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALG 564

Query:    95 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 154
              FR GK  VLVAT VAARGLDI NV  +I+++LP+  + +VHR GRTGR G  G AI  F
Sbjct:   565 DFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGKAISFF 624


>TAIR|locus:2130918 [details] [associations]
            symbol:AT4G16630 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0003723 EMBL:Z97341 EMBL:AL161544 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000265456 KO:K13181
            OMA:RIRKRDH EMBL:AJ010475 EMBL:AK228353 IPI:IPI00542014 PIR:D71433
            PIR:T51310 RefSeq:NP_193396.3 UniGene:At.49
            ProteinModelPortal:Q9ZRZ8 SMR:Q9ZRZ8 IntAct:Q9ZRZ8 STRING:Q9ZRZ8
            PaxDb:Q9ZRZ8 PRIDE:Q9ZRZ8 EnsemblPlants:AT4G16630.1 GeneID:827364
            KEGG:ath:AT4G16630 GeneFarm:955 TAIR:At4g16630 InParanoid:Q9ZRZ8
            PhylomeDB:Q9ZRZ8 ProtClustDB:CLSN2690957 Genevestigator:Q9ZRZ8
            GermOnline:AT4G16630 Uniprot:Q9ZRZ8
        Length = 789

 Score = 248 (92.4 bits), Expect = 1.5e-18, P = 1.5e-18
 Identities = 63/178 (35%), Positives = 101/178 (56%)

Query:    32 TTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSL--ALTSIIASEALHGDISQHQR 89
             T   ++  +L  L T   K  K I+F+ TK+ A  + +   L  + A+E LHG+++Q QR
Sbjct:   394 TREANQEAVLLSLCTRTFKS-KVIIFSGTKQAAHRLKILFGLAGLKAAE-LHGNLTQAQR 451

Query:    90 ERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGT 149
               +L  FR+ +   L+ATDVAARGLDI  V  +I+Y  P + +++VHR GRT RAG+EG 
Sbjct:   452 LDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGY 511

Query:   150 AILMFTSSQRRTVRSLERDVGCKFEF-VSPP--VVE--DVLESSAEQVVATLNGVHPE 202
             A+   T S R  ++ + + VG K +  V P   +V+   +++   +Q  A ++    E
Sbjct:   512 AVTFVTDSDRSLLKVIAKKVGSKLKSRVIPEQSIVKWSQIIDEMEDQYSAVISAERDE 569


>UNIPROTKB|E2RMU5 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
            [GO:0032880 "regulation of protein localization" evidence=IEA]
            [GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
            "spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
            "leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
            GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
            Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
        Length = 728

 Score = 247 (92.0 bits), Expect = 1.8e-18, P = 1.8e-18
 Identities = 55/120 (45%), Positives = 77/120 (64%)

Query:    36 SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLN 94
             SKR  L +++       +T+VF +TK+ AD ++  L    I++ ++HGD  Q +RE+ L 
Sbjct:   527 SKREKLVEILRSIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALG 585

Query:    95 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 154
              FR GK  VLVAT VAARGLDI NV  +I+++LP+  + +VHR GRTGR G  G AI  F
Sbjct:   586 DFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFF 645


>TIGR_CMR|GSU_0189 [details] [associations]
            symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
            biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
            InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
            ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
            PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
            Uniprot:Q74GQ7
        Length = 460

 Score = 243 (90.6 bits), Expect = 1.8e-18, P = 1.8e-18
 Identities = 56/149 (37%), Positives = 82/149 (55%)

Query:    18 DEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IA 76
             DE   EG          + +R    + I  + +    ++F  TK +  EV+ AL     A
Sbjct:   209 DEVHGEGAIEQVFYEVDSGQRIEAVERILGHYRPESALIFCNTKLECQEVANALAVRGYA 268

Query:    77 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH 136
             + A+HGD+ Q +R+R L  F     +VLVATDVAARGLDI  +  +I+YEL  +PE   H
Sbjct:   269 ALAIHGDLDQRERDRVLVRFANRSASVLVATDVAARGLDIKELSAVINYELTRNPEVHTH 328

Query:   137 RSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
             R GRTGRAG+ G A+ + T  + R + ++
Sbjct:   329 RIGRTGRAGERGLAVSLVTPRESRLIAAI 357


>UNIPROTKB|Q8JFP1 [details] [associations]
            symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
            species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
            KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
            EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
            ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
            Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
            KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
            ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
        Length = 407

 Score = 241 (89.9 bits), Expect = 2.0e-18, P = 2.0e-18
 Identities = 53/152 (34%), Positives = 84/152 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGIK + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   239 KEELTLEGIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARD 297

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ALHGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   298 FTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 357

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 166
             +HR GR GR G++G AI   T   +R +R +E
Sbjct:   358 IHRIGRGGRFGRKGVAINFVTEEDKRILRDIE 389


>UNIPROTKB|Q3SZ65 [details] [associations]
            symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
            species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
            OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
            RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
            SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
            GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
            OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
        Length = 407

 Score = 241 (89.9 bits), Expect = 2.0e-18, P = 2.0e-18
 Identities = 53/152 (34%), Positives = 84/152 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGIK + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   239 KEELTLEGIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARD 297

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ALHGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   298 FTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 357

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 166
             +HR GR GR G++G AI   T   +R +R +E
Sbjct:   358 IHRIGRGGRFGRKGVAINFVTEEDKRILRDIE 389


>UNIPROTKB|E2R3J1 [details] [associations]
            symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
            EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
            SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
            KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
        Length = 407

 Score = 241 (89.9 bits), Expect = 2.0e-18, P = 2.0e-18
 Identities = 53/152 (34%), Positives = 84/152 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGIK + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   239 KEELTLEGIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARD 297

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ALHGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   298 FTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 357

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 166
             +HR GR GR G++G AI   T   +R +R +E
Sbjct:   358 IHRIGRGGRFGRKGVAINFVTEEDKRILRDIE 389


>UNIPROTKB|Q14240 [details] [associations]
            symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
            "helicase activity" evidence=TAS] [GO:0006446 "regulation of
            translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
            translation initiation factor 4F complex" evidence=TAS] [GO:0000288
            "nuclear-transcribed mRNA catabolic process,
            deadenylation-dependent decay" evidence=TAS] [GO:0000289
            "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
            evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
            [GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
            pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
            process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
            GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
            GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
            CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
            EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
            IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
            UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
            ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
            STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
            PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
            Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
            UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
            HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
            PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
            EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
            PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
            Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
        Length = 407

 Score = 241 (89.9 bits), Expect = 2.0e-18, P = 2.0e-18
 Identities = 53/152 (34%), Positives = 84/152 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGIK + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   239 KEELTLEGIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARD 297

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ALHGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   298 FTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 357

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 166
             +HR GR GR G++G AI   T   +R +R +E
Sbjct:   358 IHRIGRGGRFGRKGVAINFVTEEDKRILRDIE 389


>UNIPROTKB|A6M930 [details] [associations]
            symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
            isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003743 "translation initiation factor activity"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
            EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
            ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
            Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
            Uniprot:A6M930
        Length = 407

 Score = 241 (89.9 bits), Expect = 2.0e-18, P = 2.0e-18
 Identities = 53/152 (34%), Positives = 84/152 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGIK + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   239 KEELTLEGIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARD 297

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ALHGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   298 FTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 357

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 166
             +HR GR GR G++G AI   T   +R +R +E
Sbjct:   358 IHRIGRGGRFGRKGVAINFVTEEDKRILRDIE 389


>MGI|MGI:106906 [details] [associations]
            symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
            initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
            OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
            EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
            RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
            SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
            PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
            Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
            NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
            GermOnline:ENSMUSG00000022884 Uniprot:P10630
        Length = 407

 Score = 241 (89.9 bits), Expect = 2.0e-18, P = 2.0e-18
 Identities = 53/152 (34%), Positives = 84/152 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGIK + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   239 KEELTLEGIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARD 297

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ALHGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   298 FTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 357

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 166
             +HR GR GR G++G AI   T   +R +R +E
Sbjct:   358 IHRIGRGGRFGRKGVAINFVTEEDKRILRDIE 389


>RGD|1309225 [details] [associations]
            symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
            species:10116 "Rattus norvegicus" [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
            KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
            RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
            SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
            World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
            UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
            ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
            GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
        Length = 407

 Score = 241 (89.9 bits), Expect = 2.0e-18, P = 2.0e-18
 Identities = 53/152 (34%), Positives = 84/152 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGIK + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   239 KEELTLEGIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARD 297

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ALHGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   298 FTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 357

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 166
             +HR GR GR G++G AI   T   +R +R +E
Sbjct:   358 IHRIGRGGRFGRKGVAINFVTEEDKRILRDIE 389


>UNIPROTKB|F8WFX2 [details] [associations]
            symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
            OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
            Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
        Length = 408

 Score = 241 (89.9 bits), Expect = 2.0e-18, P = 2.0e-18
 Identities = 53/152 (34%), Positives = 84/152 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGIK + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   240 KEELTLEGIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARD 298

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ALHGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   299 FTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 358

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 166
             +HR GR GR G++G AI   T   +R +R +E
Sbjct:   359 IHRIGRGGRFGRKGVAINFVTEEDKRILRDIE 390


>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
            symbol:eif4a2 "eukaryotic translation initiation
            factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0006413
            "translational initiation" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
            EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
            ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
            ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
        Length = 411

 Score = 241 (89.9 bits), Expect = 2.1e-18, P = 2.1e-18
 Identities = 53/152 (34%), Positives = 84/152 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             ++E   EGIK + I+      K   L DL        + ++F  T+R  D ++  + +  
Sbjct:   243 KEELTLEGIKQFYINVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARD 301

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ALHGD+ Q +R+  +  FR G   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   302 FTVSALHGDMDQKERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 361

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLE 166
             +HR GR GR G++G AI   T   +R +R +E
Sbjct:   362 IHRIGRGGRFGRKGVAINFVTEEDKRILRDIE 393


>TAIR|locus:2020078 [details] [associations]
            symbol:EIF4A-2 "eif4a-2" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=ISS]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005774
            "vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
            "plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
            evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
            [GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
            salt stress" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
            GO:GO:0005524 GO:GO:0005774 GO:GO:0046686 EMBL:AC005287
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 KO:K03257 EMBL:X65053
            EMBL:AF386923 EMBL:AF428462 EMBL:BT008504 EMBL:AK226344
            EMBL:AY087965 IPI:IPI00522023 PIR:JC1453 RefSeq:NP_175829.1
            UniGene:At.195 ProteinModelPortal:P41377 SMR:P41377 STRING:P41377
            PaxDb:P41377 PRIDE:P41377 ProMEX:P41377 EnsemblPlants:AT1G54270.1
            GeneID:841868 KEGG:ath:AT1G54270 GeneFarm:936 TAIR:At1g54270
            InParanoid:P41377 OMA:QVVWEEN PhylomeDB:P41377
            ProtClustDB:CLSN2679594 Genevestigator:P41377 GermOnline:AT1G54270
            Uniprot:P41377
        Length = 412

 Score = 241 (89.9 bits), Expect = 2.1e-18, P = 2.1e-18
 Identities = 57/171 (33%), Positives = 94/171 (54%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSII 75
             +DE   EGIK + ++      K   L DL    A   ++++F  T+R  D ++  + S  
Sbjct:   244 RDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRD 302

Query:    76 AS-EALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
              +  A HGD+ Q+ R+  +  FR G   VL+ TD+ ARG+D+  V L+I+++LP  PE +
Sbjct:   303 HTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENY 362

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
             +HR GR+GR G++G AI   T   +R +  +++      E + P  V D+L
Sbjct:   363 LHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEEL-PSNVADLL 412


>UNIPROTKB|D6RDK4 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
            UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
            GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
            ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
            Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
            Bgee:D6RDK4 Uniprot:D6RDK4
        Length = 704

 Score = 246 (91.7 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 55/120 (45%), Positives = 77/120 (64%)

Query:    36 SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLN 94
             SKR  L +++       +T+VF +TK+ AD ++  L    I++ ++HGD  Q +RE+ L 
Sbjct:   506 SKREKLVEILRNIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALG 564

Query:    95 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 154
              FR GK  VLVAT VAARGLDI NV  +I+++LP+  + +VHR GRTGR G  G AI  F
Sbjct:   565 DFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFF 624


>FB|FBgn0030631 [details] [associations]
            symbol:CG6227 species:7227 "Drosophila melanogaster"
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
            activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
            evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
            "regulation of alternative mRNA splicing, via spliceosome"
            evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
            HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
            EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
            EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
            RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
            EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
            UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
            Uniprot:Q9VXW2
        Length = 1224

 Score = 249 (92.7 bits), Expect = 2.3e-18, P = 2.3e-18
 Identities = 51/121 (42%), Positives = 75/121 (61%)

Query:    41 LSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQG 99
             L +L+ +Y + G  IVF   + +AD +   L        +LHG I Q  R+ T+  F+ G
Sbjct:   747 LLELLGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSG 806

Query:   100 KFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQR 159
             K  +L+AT VAARGLD+ ++ L+++Y++PN  E +VHR GRTGRAGK+G+A    T  Q 
Sbjct:   807 KVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQS 866

Query:   160 R 160
             R
Sbjct:   867 R 867


>ZFIN|ZDB-GENE-030131-925 [details] [associations]
            symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
            ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
        Length = 617

 Score = 245 (91.3 bits), Expect = 2.3e-18, P = 2.3e-18
 Identities = 48/134 (35%), Positives = 82/134 (61%)

Query:    50 KGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATD 108
             K  KTI+F +TKR  D+++  +      +  +HGD +Q +R+  LN F+ GK  +L+ATD
Sbjct:   342 KENKTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKNQQERDWVLNEFKYGKAPILIATD 401

Query:   109 VAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERD 168
             VA+RGLD+ +V  +I+++ PN+ E ++HR GRT R+ K GTA   FT +  +    L   
Sbjct:   402 VASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHDLVSV 461

Query:   169 VGCKFEFVSPPVVE 182
             +    + ++P +++
Sbjct:   462 LREANQAINPKLIQ 475


>UNIPROTKB|Q6GWX0 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
            "piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
            GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
            GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
            ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
            KEGG:ssc:431672 Uniprot:Q6GWX0
        Length = 722

 Score = 246 (91.7 bits), Expect = 2.3e-18, P = 2.3e-18
 Identities = 55/120 (45%), Positives = 77/120 (64%)

Query:    36 SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLN 94
             SKR  L +++       +T+VF +TK+ AD ++  L    I++ ++HGD  Q +RE+ L 
Sbjct:   524 SKREKLLEILRNIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALG 582

Query:    95 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 154
              FR GK  VLVAT VAARGLDI NV  +I+++LP+  + +VHR GRTGR G  G AI  F
Sbjct:   583 DFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFF 642


>UNIPROTKB|Q9NQI0 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0000237
            "leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
            "spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
            localization" evidence=IEA] [GO:0033391 "chromatoid body"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
            [GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
            GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
            OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
            EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
            IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
            RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
            ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
            PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
            PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
            Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
            KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
            GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
            HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
            InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
            NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
            Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
            Uniprot:Q9NQI0
        Length = 724

 Score = 246 (91.7 bits), Expect = 2.4e-18, P = 2.4e-18
 Identities = 55/120 (45%), Positives = 77/120 (64%)

Query:    36 SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLN 94
             SKR  L +++       +T+VF +TK+ AD ++  L    I++ ++HGD  Q +RE+ L 
Sbjct:   526 SKREKLVEILRNIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALG 584

Query:    95 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 154
              FR GK  VLVAT VAARGLDI NV  +I+++LP+  + +VHR GRTGR G  G AI  F
Sbjct:   585 DFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFF 644


>UNIPROTKB|Q4R5S7 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
            "piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
            GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
            ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
        Length = 725

 Score = 246 (91.7 bits), Expect = 2.4e-18, P = 2.4e-18
 Identities = 55/120 (45%), Positives = 77/120 (64%)

Query:    36 SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLN 94
             SKR  L +++       +T+VF +TK+ AD ++  L    I++ ++HGD  Q +RE+ L 
Sbjct:   527 SKREKLVEILRNIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALG 585

Query:    95 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 154
              FR GK  VLVAT VAARGLDI NV  +I+++LP+  + +VHR GRTGR G  G AI  F
Sbjct:   586 DFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFF 645


>UNIPROTKB|F1MYC6 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
            evidence=IEA] [GO:0032880 "regulation of protein localization"
            evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
            meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
            GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
            GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
            OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
            EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
            Uniprot:F1MYC6
        Length = 729

 Score = 246 (91.7 bits), Expect = 2.4e-18, P = 2.4e-18
 Identities = 55/120 (45%), Positives = 77/120 (64%)

Query:    36 SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLN 94
             SKR  L +++       +T+VF +TK+ AD ++  L    I++ ++HGD  Q +RE+ L 
Sbjct:   528 SKREKLVEILRNIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALG 586

Query:    95 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 154
              FR GK  VLVAT VAARGLDI NV  +I+++LP+  + +VHR GRTGR G  G AI  F
Sbjct:   587 DFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFF 646


>UNIPROTKB|Q5W5U4 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
            "piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
            GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
            IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
            ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
            GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
            OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
        Length = 729

 Score = 246 (91.7 bits), Expect = 2.4e-18, P = 2.4e-18
 Identities = 55/120 (45%), Positives = 77/120 (64%)

Query:    36 SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLN 94
             SKR  L +++       +T+VF +TK+ AD ++  L    I++ ++HGD  Q +RE+ L 
Sbjct:   528 SKREKLVEILRNIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALG 586

Query:    95 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMF 154
              FR GK  VLVAT VAARGLDI NV  +I+++LP+  + +VHR GRTGR G  G AI  F
Sbjct:   587 DFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFF 646


>ASPGD|ASPL0000013201 [details] [associations]
            symbol:AN4233 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
            RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
            STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
            KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
        Length = 465

 Score = 242 (90.2 bits), Expect = 2.5e-18, P = 2.5e-18
 Identities = 53/120 (44%), Positives = 72/120 (60%)

Query:    37 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNG 95
             K   L  L+  +A G   I+FT T  +   V+  L ++   +  LHG +SQ  R   L  
Sbjct:   272 KNLYLVYLLNEFA-GQSAIIFTTTVHETQRVAFMLRALGFGAIPLHGQLSQSARLGALGK 330

Query:    96 FRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 155
             FR     +LVATDVAARGLDIP+VD++ +++LP D +T++HR GRT RAGK G AI   T
Sbjct:   331 FRSRSRDILVATDVAARGLDIPSVDVVFNFDLPMDSKTYIHRVGRTARAGKSGVAISFVT 390


>FB|FBgn0015331 [details] [associations]
            symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
            "establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
            system development" evidence=NAS] [GO:0005634 "nucleus"
            evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
            evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
            GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
            GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
            EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
            ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
            MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
            EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
            UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
            OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
            NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
        Length = 619

 Score = 230 (86.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
 Identities = 44/109 (40%), Positives = 70/109 (64%)

Query:    55 IVFTQTKRDADEV-SLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 113
             ++F + K+D D +    L   + + A+HG   Q +R R ++ +R GK  VLVATDVA++G
Sbjct:   432 LIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKG 491

Query:   114 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTV 162
             LD PNV  +I+Y++P+D E +VHR GRTGR+  +G A  +   +  ++V
Sbjct:   492 LDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSV 540

 Score = 56 (24.8 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
 Identities = 9/15 (60%), Positives = 10/15 (66%)

Query:   441 CFNCGKSGHRASECP 455
             C  CG  GHR +ECP
Sbjct:   579 CTYCGGLGHRITECP 593


>GENEDB_PFALCIPARUM|PFE0925c [details] [associations]
            symbol:PFE0925c "snrnp protein, putative"
            species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
            HSSP:Q58083 HOGENOM:HOG000268796 RefSeq:XP_001351742.1
            ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
            GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
            ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
        Length = 1123

 Score = 248 (92.4 bits), Expect = 2.6e-18, P = 2.6e-18
 Identities = 52/124 (41%), Positives = 79/124 (63%)

Query:    33 TATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRER 91
             T   K+  L +++ +Y      IVF   K+ AD +S ++T +   + ALHG  +Q  RE+
Sbjct:   951 TEGKKKQKLQEILEMYEP--PIIVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQ 1008

Query:    92 TLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAI 151
             TL+ F+  +F +LVATDVA RG+D+  V L+I++++P D E++ HR GRTGRAG +G AI
Sbjct:  1009 TLSAFKNAEFDILVATDVAGRGIDVHGVKLVINFDMPKDIESYTHRIGRTGRAGMKGLAI 1068

Query:   152 LMFT 155
                T
Sbjct:  1069 SFIT 1072


>UNIPROTKB|Q8I0W7 [details] [associations]
            symbol:PFE0925c "Snrnp protein, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL844504
            InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
            HOGENOM:HOG000268796 RefSeq:XP_001351742.1
            ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
            GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
            ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
        Length = 1123

 Score = 248 (92.4 bits), Expect = 2.6e-18, P = 2.6e-18
 Identities = 52/124 (41%), Positives = 79/124 (63%)

Query:    33 TATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRER 91
             T   K+  L +++ +Y      IVF   K+ AD +S ++T +   + ALHG  +Q  RE+
Sbjct:   951 TEGKKKQKLQEILEMYEP--PIIVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQ 1008

Query:    92 TLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAI 151
             TL+ F+  +F +LVATDVA RG+D+  V L+I++++P D E++ HR GRTGRAG +G AI
Sbjct:  1009 TLSAFKNAEFDILVATDVAGRGIDVHGVKLVINFDMPKDIESYTHRIGRTGRAGMKGLAI 1068

Query:   152 LMFT 155
                T
Sbjct:  1069 SFIT 1072


>POMBASE|SPAC1F5.10 [details] [associations]
            symbol:SPAC1F5.10 "ATP-dependent RNA helicase
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
            processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
            GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
            OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
            ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
            EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
            NextBio:20802696 Uniprot:Q10055
        Length = 394

 Score = 239 (89.2 bits), Expect = 3.1e-18, P = 3.1e-18
 Identities = 51/153 (33%), Positives = 86/153 (56%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             +DE   EG+K Y I+      K   L DL        + ++F  ++R  D ++  +    
Sbjct:   226 RDELTLEGLKQYFIAVEKEEWKFDTLCDLYDTLTIT-QAVIFCNSRRKVDWLTEKMREAN 284

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 ++HG++ Q +R+  +  FRQG   VL+ TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   285 FTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVINYDLPANRENY 344

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLER 167
             +HR GR+GR G++G AI   T+   R +R +E+
Sbjct:   345 IHRIGRSGRFGRKGVAINFVTNEDVRILRDIEQ 377


>UNIPROTKB|Q9KLH6 [details] [associations]
            symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
            family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
            N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
            OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
            DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
            ProtClustDB:CLSK869757 Uniprot:Q9KLH6
        Length = 422

 Score = 240 (89.5 bits), Expect = 3.1e-18, P = 3.1e-18
 Identities = 55/148 (37%), Positives = 90/148 (60%)

Query:    22 AEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS--LALTSIIASEA 79
             AE ++          KR +LS LI       + +VFT+T++ +D ++  L L  I A  +
Sbjct:   223 AETVQQMVYPVDKKRKRELLSYLIGS-KNWQQVLVFTKTRQGSDALAEELKLDGIKAV-S 280

Query:    80 LHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSG 139
             ++GD SQ  R++ L+ F+ GK   L+ATDVAARGLDI  ++ +++Y++P   E +VHR G
Sbjct:   281 INGDKSQGARQKALDDFKAGKVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIG 340

Query:   140 RTGRAGKEGTAILMFTSSQRRTVRSLER 167
             RTGRAG  G A+ + +  ++  + ++ER
Sbjct:   341 RTGRAGLAGLAVSLLSHDEQPQLEAIER 368


>TIGR_CMR|VC_A0768 [details] [associations]
            symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
            OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
            DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
            ProtClustDB:CLSK869757 Uniprot:Q9KLH6
        Length = 422

 Score = 240 (89.5 bits), Expect = 3.1e-18, P = 3.1e-18
 Identities = 55/148 (37%), Positives = 90/148 (60%)

Query:    22 AEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS--LALTSIIASEA 79
             AE ++          KR +LS LI       + +VFT+T++ +D ++  L L  I A  +
Sbjct:   223 AETVQQMVYPVDKKRKRELLSYLIGS-KNWQQVLVFTKTRQGSDALAEELKLDGIKAV-S 280

Query:    80 LHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSG 139
             ++GD SQ  R++ L+ F+ GK   L+ATDVAARGLDI  ++ +++Y++P   E +VHR G
Sbjct:   281 INGDKSQGARQKALDDFKAGKVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIG 340

Query:   140 RTGRAGKEGTAILMFTSSQRRTVRSLER 167
             RTGRAG  G A+ + +  ++  + ++ER
Sbjct:   341 RTGRAGLAGLAVSLLSHDEQPQLEAIER 368


>POMBASE|SPBC543.06c [details] [associations]
            symbol:dbp8 "ATP-dependent RNA helicase Dbp8
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPBC543.06c GO:GO:0005524 GO:GO:0005730
            EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ OrthoDB:EOG4PP1RW
            RefSeq:NP_596794.1 ProteinModelPortal:Q9HGM5 STRING:Q9HGM5
            EnsemblFungi:SPBC543.06c.1 GeneID:2541069 KEGG:spo:SPBC543.06c
            NextBio:20802183 Uniprot:Q9HGM5
        Length = 453

 Score = 241 (89.9 bits), Expect = 3.1e-18, P = 3.1e-18
 Identities = 58/154 (37%), Positives = 89/154 (57%)

Query:    30 ISTTATSKRTILSDLITVYAKGGKT-IVFTQTKRDADEVS--LALTSIIASEALHGDISQ 86
             I  ++  +   L  L+T+     K+ I+F    R A+ +   L L  +  +E LH ++ Q
Sbjct:   236 IFVSSQVREAYLVHLLTIPENAKKSAIIFVNRTRTAELIYSILRLLELRVTE-LHSEMVQ 294

Query:    87 HQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK 146
              +R  +L  FR     +LVATDVA+RGLDIP+V L+I+++LP DP+ ++HR GRT RAG+
Sbjct:   295 RERINSLGRFRAEAAKILVATDVASRGLDIPSVQLVINFDLPRDPDDYIHRVGRTARAGR 354

Query:   147 EGTAILMFTSSQRRTVRSLERDVGCK---FEFVS 177
              G +I + T      V ++E  VG K   +E VS
Sbjct:   355 SGESISIVTERDVDLVHAIEDRVGTKLSEYEHVS 388


>TIGR_CMR|DET_0183 [details] [associations]
            symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:243164 "Dehalococcoides ethenogenes 195"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
            STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
            OMA:NFAPAVM ProtClustDB:CLSK837629
            BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
        Length = 560

 Score = 243 (90.6 bits), Expect = 3.3e-18, P = 3.3e-18
 Identities = 51/157 (32%), Positives = 91/157 (57%)

Query:    13 QVGNQDEKLAEGIKLYAISTTATSKRTILSDLI-TVYAKGGKTIVFTQTKRDADEVSLAL 71
             Q+G Q    +    +Y +      K  +L +++ T   K    ++F +TK  A+ ++  +
Sbjct:   204 QIGTQAPASSVSHSVYPVKNH--QKTPLLIEILKTTETKS--VLIFARTKYGAENLADEI 259

Query:    72 TSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPND 130
             +     + +L G++SQ++R   + GFR+G F +LVATD+AARGLDI ++  +I+Y++P+ 
Sbjct:   260 SRAGFTTASLQGNLSQNRRHAVMEGFRRGNFKILVATDIAARGLDIDHISHVINYDMPDT 319

Query:   131 PETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLER 167
             PE + HR GRTGR  + G A+ + T      VR +++
Sbjct:   320 PEDYTHRIGRTGRFDRTGQALSLVTGRDGDMVRDIQK 356


>UNIPROTKB|F1NA53 [details] [associations]
            symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00670000098028 EMBL:AADN02071779 EMBL:AADN02071780
            IPI:IPI00684751 ProteinModelPortal:F1NA53
            Ensembl:ENSGALT00000004949 ArrayExpress:F1NA53 Uniprot:F1NA53
        Length = 402

 Score = 239 (89.2 bits), Expect = 3.4e-18, P = 3.4e-18
 Identities = 53/134 (39%), Positives = 79/134 (58%)

Query:    55 IVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 113
             I+FT+T ++   +++ L      S ALH  + Q QR   L  F+   F +L+ATDVAARG
Sbjct:   252 IIFTKTCKECQILNMMLRKFSFPSVALHSMMKQRQRFAALAKFKSSIFKILIATDVAARG 311

Query:   114 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKF 173
             LDIP V ++I++  P  P+ ++HR GRT RAG+ G +I M T      V ++E ++  K 
Sbjct:   312 LDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGISITMVTQYDIHLVHAIEEEIKLKL 371

Query:   174 -EF-VSPPVVEDVL 185
              EF V   +V D+L
Sbjct:   372 QEFSVEEKLVLDIL 385


>WB|WBGene00018776 [details] [associations]
            symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0040010 "positive regulation of growth rate"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
            "morphogenesis of an epithelium" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
            [GO:0040018 "positive regulation of multicellular organism growth"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
            "growth" evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
            GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
            GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
            HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
            RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
            PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
            KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
            InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
        Length = 970

 Score = 246 (91.7 bits), Expect = 3.8e-18, P = 3.8e-18
 Identities = 55/138 (39%), Positives = 80/138 (57%)

Query:    41 LSDLITVYAKGGKTIVFTQTKRDADEV--SLALTSIIASEALHGDISQHQRERTLNGFRQ 98
             L +L+ +Y + G +IVF   +  AD++   L  T   +   LHG I QH R+ ++  F+ 
Sbjct:   541 LLELLGMYYEEGSSIVFVDKQEKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKT 600

Query:    99 GKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAI-LMFTSS 157
             G   VLVAT VAARGLD+ N+ L+++Y+ PN  E +VHR GRTGRAG++G A   +    
Sbjct:   601 GVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFVLPEH 660

Query:   158 QRRTVRSLER---DVGCK 172
             Q +    + R     GCK
Sbjct:   661 QEKMAGEICRAFETAGCK 678


>DICTYBASE|DDB_G0287361 [details] [associations]
            symbol:ddx41 "DEAD box protein abstrakt"
            species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
            GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
            GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
            EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
            IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
            KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
        Length = 671

 Score = 234 (87.4 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
 Identities = 41/97 (42%), Positives = 66/97 (68%)

Query:    55 IVFTQTKRDADEV-SLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 113
             ++F + K+D D++    L   + + ++HGD SQ +RE  +  FR+GK  VLVATDVA++G
Sbjct:   478 LIFCENKKDVDDIYEYLLLKQVEAVSIHGDKSQDERESAIKAFREGKKDVLVATDVASKG 537

Query:   114 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTA 150
             LD P +  +I++++P + E ++HR GRTGR G +G A
Sbjct:   538 LDFPEIQHVINFDMPREIENYIHRIGRTGRRGNKGVA 574

 Score = 43 (20.2 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
 Identities = 12/22 (54%), Positives = 15/22 (68%)

Query:    40 ILS--DLITV-YAKGGKTIVFT 58
             ILS  D+I + Y   GKT+VFT
Sbjct:   256 ILSGRDMIGIAYTGSGKTLVFT 277

 Score = 41 (19.5 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
 Identities = 7/15 (46%), Positives = 7/15 (46%)

Query:   441 CFNCGKSGHRASECP 455
             C  C   GHR   CP
Sbjct:   637 CEYCDGRGHRLVNCP 651


>SGD|S000001767 [details] [associations]
            symbol:TIF1 "Translation initiation factor eIF4A"
            species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
            initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0006413 "translational
            initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
            "eukaryotic translation initiation factor 4F complex"
            evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
            SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
            EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
            OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
            EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
            RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
            PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
            PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
            SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
            STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
            EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
            KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
            EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
            GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
        Length = 395

 Score = 238 (88.8 bits), Expect = 4.1e-18, P = 4.1e-18
 Identities = 51/160 (31%), Positives = 89/160 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             +DE   EGIK + ++      K   L+DL    +   + ++F  T+R  +E++  L +  
Sbjct:   226 KDELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVT-QAVIFCNTRRKVEELTTKLRNDK 284

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 A++ D+ Q +R+  +  FR G   +L++TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   285 FTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENY 344

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFE 174
             +HR GR GR G++G AI   T+     +R LE+    + E
Sbjct:   345 IHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIE 384


>SGD|S000003674 [details] [associations]
            symbol:TIF2 "Translation initiation factor eIF4A"
            species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
            initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
            initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
            [GO:0016281 "eukaryotic translation initiation factor 4F complex"
            evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0006413 "translational initiation"
            evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
            GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
            OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
            EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
            RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
            PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
            PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
            SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
            STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
            EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
            KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
            EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
            GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
        Length = 395

 Score = 238 (88.8 bits), Expect = 4.1e-18, P = 4.1e-18
 Identities = 51/160 (31%), Positives = 89/160 (55%)

Query:    17 QDEKLAEGIKLYAISTTATS-KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI- 74
             +DE   EGIK + ++      K   L+DL    +   + ++F  T+R  +E++  L +  
Sbjct:   226 KDELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVT-QAVIFCNTRRKVEELTTKLRNDK 284

Query:    75 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF 134
                 A++ D+ Q +R+  +  FR G   +L++TD+ ARG+D+  V L+I+Y+LP + E +
Sbjct:   285 FTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENY 344

Query:   135 VHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFE 174
             +HR GR GR G++G AI   T+     +R LE+    + E
Sbjct:   345 IHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIE 384

WARNING:  HSPs involving 646 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.132   0.378    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      456       366   0.00084  117 3  11 22  0.41    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  896
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  212 KB (2118 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.45u 0.08s 29.53t   Elapsed:  00:00:03
  Total cpu time:  29.48u 0.08s 29.56t   Elapsed:  00:00:03
  Start:  Sat May 11 13:27:12 2013   End:  Sat May 11 13:27:15 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with emb1138 emb1138 emb1138 AT5G26742	protein from Arabidopsis thaliana	2.4e-153
BLAST match view associations BLAST with PMH2 PMH2 PMH2 putative mitochondrial RNA helicase 2	protein from Arabidopsis thaliana	1.2e-51
BLAST match view associations BLAST with PMH1 PMH1 PMH1 putative mitochondrial RNA helicase 1	protein from Arabidopsis thaliana	3.6e-50
BLAST match view associations BLAST with ddx21 ddx21 ddx21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	gene_product from Danio rerio	9.4e-50
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Canis lupus familiaris	8.5e-49
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Bos taurus	1.2e-48
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Canis lupus familiaris	1.2e-48
BLAST match view associations BLAST with Ddx50 Ddx50 Ddx50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	protein from Mus musculus	2.5e-48
BLAST match view associations BLAST with DDX50 DDX50 DDX50 ATP-dependent RNA helicase DDX50	protein from Homo sapiens	2.7e-48
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Gallus gallus	2.6e-47
BLAST match view associations BLAST with Ddx50 Ddx50 Ddx50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	gene from Rattus norvegicus	4.2e-47
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Sus scrofa	8.6e-47
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Canis lupus familiaris	2.5e-46
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Canis lupus familiaris	2.5e-46
BLAST match view associations BLAST with Ddx21 Ddx21 Ddx21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	protein from Mus musculus	3.8e-46
BLAST match view associations BLAST with DDX21 DDX21 DDX21 DDX21 protein	protein from Bos taurus	4.1e-46
BLAST match view associations BLAST with Ddx21 Ddx21 Ddx21 DEAD (Asp-Glu-Ala-Asp) box helicase 21	gene from Rattus norvegicus	6.6e-46
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Nucleolar RNA helicase 2	protein from Homo sapiens	1.1e-45
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Sus scrofa	1.0e-44
BLAST match view associations BLAST with PRH75 PRH75 PRH75	protein from Arabidopsis thaliana	3.6e-44
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Gallus gallus	1.6e-38
BLAST match view associations BLAST with PFE0215w PFE0215w PFE0215w ATP-dependent helicase, putative	gene from Plasmodium falciparum	2.9e-34
BLAST match view associations BLAST with PFE0215w PFE0215w PFE0215w ATP-dependent helicase, putative	protein from Plasmodium falciparum 3D7	2.9e-34
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Gallus gallus	2.9e-32
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Geobacillus kaustophilus HTA426	6.0e-32
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 10987	1.7e-30
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis str. Al Hakam	5.1e-30
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus E33L	5.1e-30
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis serovar konkukian str. 97-27	5.1e-30
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus anthracis	5.1e-30
BLAST match view associations BLAST with BA_0247 BA_0247 BA_0247 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	5.1e-30
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 14579	5.5e-30
BLAST match view associations BLAST with deaD deaD deaD Cold-shock DEAD box protein A	protein from Pseudomonas protegens Pf-5	6.3e-30
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	1.9e-28
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	1.9e-28
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus subtilis subsp. subtilis str. 168	2.1e-28
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus licheniformis DSM 13 = ATCC 14580	7.2e-28
BLAST match view associations BLAST with SO_4034 SO_4034 SO_4034 ATP-dependent RNA helicase DeaD	protein from Shewanella oneidensis MR-1	8.1e-27
BLAST match view associations BLAST with PFL0100c PFL0100c PFL0100c ATP dependent RNA helicase, putative	gene from Plasmodium falciparum	4.5e-26
BLAST match view associations BLAST with PFL0100c PFL0100c PFL0100c ATP-dependent RNA Helicase, putative	protein from Plasmodium falciparum 3D7	4.5e-26
BLAST match view associations BLAST with DED1 DED1 DED1 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase	gene from Saccharomyces cerevisiae	7.1e-26
BLAST match view associations BLAST with orf19.7392 orf19.7392 orf19.7392	gene_product from Candida albicans	1.6e-25
BLAST match view associations BLAST with SPO_1443 SPO_1443 SPO_1443 ATP-dependent RNA helicase RhlE	protein from Ruegeria pomeroyi DSS-3	1.9e-25
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor str. N16961	3.2e-25
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor	3.2e-25
BLAST match view associations BLAST with CPS_1590 CPS_1590 CPS_1590 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	3.3e-25
BLAST match view associations BLAST with DBP1 DBP1 DBP1 Putative ATP-dependent RNA helicase of the DEAD-box protein family	gene from Saccharomyces cerevisiae	5.6e-25
BLAST match view associations BLAST with RRP3 RRP3 RRP3 Protein involved in rRNA processing	gene from Saccharomyces cerevisiae	5.7e-25
BLAST match view associations BLAST with AT5G14610 AT5G14610 AT5G14610	protein from Arabidopsis thaliana	1.0e-24
BLAST match view associations BLAST with DRH1 DRH1 DRH1 DEAD box RNA helicase 1	protein from Arabidopsis thaliana	1.5e-24
BLAST match view associations BLAST with deaD deaD deaD DeaD, DEAD-box RNA helicase	protein from Escherichia coli K-12	4.3e-24
BLAST match view associations BLAST with deaD deaD deaD Cold-shock DEAD box protein A homolog	protein from Mycobacterium tuberculosis	5.2e-24
BLAST match view associations BLAST with RH36 RH36 RH36 RNA helicase 36	protein from Arabidopsis thaliana	6.7e-24
BLAST match view associations BLAST with SO_1383 SO_1383 SO_1383 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	7.3e-24
BLAST match view associations BLAST with AT3G58510 AT3G58510 AT3G58510	protein from Arabidopsis thaliana	8.5e-24
BLAST match view associations BLAST with CPS_1726 CPS_1726 CPS_1726 RNA helicase DeaD	protein from Colwellia psychrerythraea 34H	1.4e-23
BLAST match view associations BLAST with Bt.75622 Bt.75622 Bt.75622 Uncharacterized protein	protein from Bos taurus	1.7e-23
BLAST match view associations BLAST with orf19.7546 orf19.7546 orf19.7546	gene_product from Candida albicans	3.4e-23
BLAST match view associations BLAST with dbpA dbpA dbpA	gene from Escherichia coli K-12	3.8e-23
BLAST match view associations BLAST with PSPPH_0449 PSPPH_0449 PSPPH_0449 ATP-dependent RNA helicase RhlE, putative	protein from Pseudomonas syringae pv. phaseolicola 1448A	4.0e-23
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase RhlE	protein from Hyphomonas neptunium ATCC 15444	4.1e-23
BLAST match view associations BLAST with laf-1 laf-1 laf-1	gene from Caenorhabditis elegans	4.2e-23
BLAST match view associations BLAST with GSU_0914 GSU_0914 GSU_0914 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	4.4e-23
BLAST match view associations BLAST with BAS5307 BAS5307 BAS5307 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis	4.8e-23
BLAST match view associations BLAST with BA_5703 BA_5703 BA_5703 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	4.8e-23
BLAST match view associations BLAST with AT2G42520 AT2G42520 AT2G42520	protein from Arabidopsis thaliana	6.8e-23
BLAST match view associations BLAST with AT3G06480 AT3G06480 AT3G06480	protein from Arabidopsis thaliana	7.0e-23
BLAST match view associations BLAST with rhlE_2 rhlE_2 rhlE_2 Putative ATP-dependent RNA helicase	protein from Pseudomonas protegens Pf-5	1.1e-22
BLAST match view associations BLAST with Rm62 Rm62 Rm62	protein from Drosophila melanogaster	1.2e-22
BLAST match view associations BLAST with AT5G63120 AT5G63120 AT5G63120	protein from Arabidopsis thaliana	1.2e-22
BLAST match view associations BLAST with vbh-1 vbh-1 vbh-1	gene from Caenorhabditis elegans	1.2e-22
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Sus scrofa	1.2e-22
BLAST match view associations BLAST with I3LHW0 I3LHW0 I3LHW0 Uncharacterized protein	protein from Sus scrofa	1.4e-22
BLAST match view associations BLAST with LOC100524536 LOC100524536 LOC100524536 Uncharacterized protein	protein from Sus scrofa	1.4e-22
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Bos taurus	2.0e-22
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Canis lupus familiaris	2.1e-22
BLAST match view associations BLAST with DDX3X DDX3X DDX3X ATP-dependent RNA helicase DDX3X	protein from Homo sapiens	2.1e-22
BLAST match view associations BLAST with CPS_0042 CPS_0042 CPS_0042 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	4.2e-22
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Coxiella burnetii RSA 493	4.2e-22
BLAST match view associations BLAST with CBU_0670 CBU_0670 CBU_0670 ATP-dependent RNA helicase RhlE, putative	protein from Coxiella burnetii RSA 493	4.2e-22
BLAST match view associations BLAST with CPS_0042 CPS_0042 CPS_0042 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	4.2e-22
BLAST match view associations BLAST with TIF1 TIF1 TIF1 ATP-dependent RNA helicase eIF4A	protein from Magnaporthe oryzae 70-15	1.0e-21
BLAST match view associations BLAST with Ddx3y Ddx3y Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	protein from Mus musculus	1.3e-21
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	protein from Mus musculus	1.4e-21
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	gene from Rattus norvegicus	1.4e-21
BLAST match view associations BLAST with SO_3388 SO_3388 SO_3388 ATP-dependent RNA helicase DEAD box family	protein from Shewanella oneidensis MR-1	1.4e-21
BLAST match view associations BLAST with SO_3388 SO_3388 SO_3388 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	1.4e-21
BLAST match view associations BLAST with pl10 pl10 pl10	gene_product from Danio rerio	1.5e-21
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Sus scrofa	1.9e-21
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Gallus gallus	2.0e-21
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Gallus gallus	2.0e-21
BLAST match view associations BLAST with GSU_0491 GSU_0491 GSU_0491 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	2.5e-21
BLAST match view associations BLAST with PFL1310c PFL1310c PFL1310c ATP-dependent RNA helicase, putative	gene from Plasmodium falciparum	4.2e-21
BLAST match view associations BLAST with AT3G58570 AT3G58570 AT3G58570	protein from Arabidopsis thaliana	5.4e-21
BLAST match view associations BLAST with Ddx3y Ddx3y Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked	gene from Rattus norvegicus	5.5e-21