BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012794
(456 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L7S8|RH3_ARATH DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Arabidopsis
thaliana GN=RH3 PE=1 SV=2
Length = 748
Score = 575 bits (1483), Expect = e-163, Method: Compositional matrix adjust.
Identities = 284/337 (84%), Positives = 315/337 (93%)
Query: 14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTS 73
VG+QDEKLAEGIKLYAI+TT+TSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLAL++
Sbjct: 314 VGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSN 373
Query: 74 IIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 133
IA+EALHGDISQHQRERTLN FRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPET
Sbjct: 374 SIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPET 433
Query: 134 FVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVV 193
FVHRSGRTGRAGKEG+AILM TSSQ+RTVRSLERDVGC FEF+SPP V D+LESSA+QVV
Sbjct: 434 FVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVV 493
Query: 194 ATLNGVHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQ 253
ATLNGVHP+S++FF+ TAQ+L EEKGTDALAAALA LSGFS+PPSSRSL++HE+GWVTLQ
Sbjct: 494 ATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALAHLSGFSQPPSSRSLLSHEKGWVTLQ 553
Query: 254 LTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLN 313
L RD +RGF+SARSV GFLSD+Y TAADE+GKI +IADDR+QGAVFDLPEEIAKELL
Sbjct: 554 LIRDPTNARGFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLE 613
Query: 314 KQIPPGNTISKITKLPALQDDGPSSDNYGRFSSRDRF 350
K +P GN++S ITKLP LQDDGPSSDNYGRFSSRDR
Sbjct: 614 KDVPEGNSLSMITKLPPLQDDGPSSDNYGRFSSRDRM 650
>sp|Q0DM51|RH3_ORYSJ DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza
sativa subsp. japonica GN=Os03g0827700 PE=2 SV=2
Length = 758
Score = 569 bits (1467), Expect = e-161, Method: Compositional matrix adjust.
Identities = 273/335 (81%), Positives = 308/335 (91%)
Query: 14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTS 73
VG+QDEKLAEGIKLYAI T+TSKRT+LSDLITVYAKGGKTIVFT+TKRDADEVSLALT+
Sbjct: 314 VGDQDEKLAEGIKLYAIPLTSTSKRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTN 373
Query: 74 IIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 133
IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET
Sbjct: 374 SIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 433
Query: 134 FVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVV 193
FVHRSGRTGRAGK GTAILMFT+SQRRTVRSLERDVGC+F+F+SPP +EDVLESSAE V+
Sbjct: 434 FVHRSGRTGRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVI 493
Query: 194 ATLNGVHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQ 253
ATL GVH ES+++F P A+RL EE G +ALA+ALA LSGFS+PPSSRSLI+HEQGWVTLQ
Sbjct: 494 ATLRGVHTESIQYFIPAAERLQEELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQ 553
Query: 254 LTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLN 313
LTRD + RGF S RSV GFLSDV AADE+GKI + AD++VQGAVFDLPEEIA++LL+
Sbjct: 554 LTRDPGYGRGFFSPRSVTGFLSDVSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLS 613
Query: 314 KQIPPGNTISKITKLPALQDDGPSSDNYGRFSSRD 348
++PPGNTI+K+TKLPALQDDGP++D+YGRFS+ D
Sbjct: 614 MELPPGNTITKVTKLPALQDDGPATDSYGRFSNSD 648
>sp|Q0D8N0|RH53_ORYSJ DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa subsp.
japonica GN=Os07g0143700 PE=2 SV=2
Length = 602
Score = 222 bits (565), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 137/175 (78%), Gaps = 2/175 (1%)
Query: 14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTS 73
VG++D+KL EGI LY+I++ K +IL LI +A GGK IVFTQTKR+AD ++ A+
Sbjct: 291 VGDEDQKLPEGISLYSIASEHYGKPSILGPLIKEHANGGKCIVFTQTKREADRLAYAMGR 350
Query: 74 IIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 133
A +ALHGDISQ+QRERTL+GFR G+F +LVATDVAARGLDIPNVDL+IHYELPN E
Sbjct: 351 SYACQALHGDISQNQRERTLSGFRDGRFNILVATDVAARGLDIPNVDLVIHYELPNTSEL 410
Query: 134 FVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESS 188
FVHRSGRT RAGK+G+AIL++T+ Q R VR +E+D+GCKF + P +E E+S
Sbjct: 411 FVHRSGRTARAGKKGSAILIYTNDQARAVRIIEQDIGCKFTEL--PKIEVADEAS 463
>sp|Q9LUW5|RH53_ARATH DEAD-box ATP-dependent RNA helicase 53 OS=Arabidopsis thaliana
GN=RH53 PE=2 SV=1
Length = 616
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 130/169 (76%)
Query: 14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTS 73
VG+ D+KLA+GI Y+I + + +I+ L+T +AKGGK IVFTQTKRDAD +S AL
Sbjct: 312 VGDSDQKLADGITTYSIIADSYGRASIIGPLVTEHAKGGKCIVFTQTKRDADRLSYALAR 371
Query: 74 IIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 133
EALHGDISQ QRERTL GFR G F +LVATDVAARGLD+PNVDLIIHYELPN+ ET
Sbjct: 372 SFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTET 431
Query: 134 FVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 182
FVHR+GRTGRAGK+G+AIL+++ Q R V+ +ER+VG +F + VE
Sbjct: 432 FVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIEREVGSRFTELPSIAVE 480
>sp|Q0ILZ4|RH9_ORYSJ DEAD-box ATP-dependent RNA helicase 9 OS=Oryza sativa subsp.
japonica GN=Os12g0611200 PE=2 SV=1
Length = 628
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/160 (63%), Positives = 124/160 (77%)
Query: 14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTS 73
VG D+KLAEGI LY+I++ +K +L +LI +AKGGK IVFTQTKRDAD +S +
Sbjct: 305 VGEDDQKLAEGISLYSIASEGHAKPAVLGELIKEHAKGGKCIVFTQTKRDADRLSYTMGR 364
Query: 74 IIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 133
+ALHGDI+Q QRERTL GFR+G F +L+ATDVAARGLDIPNVDL+IH+ELPN E
Sbjct: 365 SFQCQALHGDITQAQRERTLKGFREGHFNILIATDVAARGLDIPNVDLVIHFELPNSSEL 424
Query: 134 FVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKF 173
FVHRSGRTGRAGK+G AI+M + Q R +R +E DVGCKF
Sbjct: 425 FVHRSGRTGRAGKKGKAIVMHSYQQSRAIRMVENDVGCKF 464
>sp|Q9LUW6|RH9_ARATH DEAD-box ATP-dependent RNA helicase 9 OS=Arabidopsis thaliana
GN=RH9 PE=2 SV=1
Length = 610
Score = 209 bits (532), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/169 (58%), Positives = 128/169 (75%)
Query: 14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTS 73
VG+ D+KLA+GI +Y+I+ + + +I+ L+ + KGGK IVFTQTKRDAD ++ L
Sbjct: 324 VGDSDQKLADGITMYSIAADSYGRASIIGPLVKEHGKGGKCIVFTQTKRDADRLAFGLAK 383
Query: 74 IIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 133
EALHGDISQ QRERTL GFR G F++LVATDVAARGLD+PNVDL+IHYELPN+ ET
Sbjct: 384 SYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVPNVDLVIHYELPNNTET 443
Query: 134 FVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVE 182
FVHR+GRTGRAGK+G+AIL+ Q R V+ +E++VG +F + VE
Sbjct: 444 FVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSRFNELPSIAVE 492
>sp|Q650T9|RH7_ORYSJ DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp.
japonica GN=Os09g0520700 PE=2 SV=1
Length = 696
Score = 191 bits (486), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 127/328 (38%), Positives = 184/328 (56%), Gaps = 21/328 (6%)
Query: 14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTS 73
VG++ K + ++ A+ ++ ++ D+I Y++GG+TI+FT+TK A + L+
Sbjct: 332 VGDEKLKASASVRHLALPCNRAARAQVIPDIIRCYSRGGRTIIFTETKESASD----LSG 387
Query: 74 IIA-SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
+IA S ALHGD++Q QRE L GFR GKF VLVAT+VAARGLDI +V LII E P D E
Sbjct: 388 LIAGSRALHGDVAQAQREVILAGFRSGKFLVLVATNVAARGLDINDVQLIIQCEPPRDVE 447
Query: 133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
++HRSGRTGRAG G A+++F + V +ER+ G KFE +S P DV +S+ +
Sbjct: 448 AYIHRSGRTGRAGNTGVAVMLFEPRYKFNVNRIERESGVKFEHISAPQPTDVAQSAGTEA 507
Query: 193 VATLNGVHPESVEFFTPTAQRLIEEKG---TDALAAALAQLSGFSRPPSSRSLINHEQGW 249
++ V + F A++L+ G D LA ALA+ G++ RSL++
Sbjct: 508 AEAISSVSDSVIPVFREQAEQLLNSSGMSAVDLLAKALAKAVGYTD-IKKRSLLSSMDNH 566
Query: 250 VTLQL-TRDSAFSRGFMSARSVMGFLSDVYPT--AADEIGKIHIIADDRVQGAVFDLPE- 305
TL L T S ++ GF V+ L P AD G I I AD GAVFD+P
Sbjct: 567 TTLLLQTGRSVYAAGF-----VLSTLKRFMPEERLADVKG-ITITADG--TGAVFDVPSA 618
Query: 306 EIAKELLNKQIPPGNTISKITKLPALQD 333
E+ + Q T+ ++ +LP LQ+
Sbjct: 619 EVEDYIQGAQNAAMVTVEEVKQLPPLQE 646
>sp|Q9JIK5|DDX21_MOUSE Nucleolar RNA helicase 2 OS=Mus musculus GN=Ddx21 PE=1 SV=3
Length = 851
Score = 191 bits (486), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 212/398 (53%), Gaps = 45/398 (11%)
Query: 14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALT 72
+G + +K A ++ AI T + ++ D+I VY+ G+TI+F +TK+DA E+S
Sbjct: 472 IGKKTQKAAITVEHLAIKCHWTERAAVIGDVIRVYSGHQGRTIIFCETKKDAQELSQNTC 531
Query: 73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
+++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL++ P D E
Sbjct: 532 IKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVE 591
Query: 133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
+++HRSGRTGRAG+ G I + + + + +E+ G KF+ + P +++++S++
Sbjct: 592 SYIHRSGRTGRAGRTGVCICFYQNKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDA 651
Query: 193 VATLNGVHPESVEFFTPTAQRLIEEKG-TDALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
+ L+ V P ++ F +A++LIEEKG +ALAAALA +SG + RSLIN + G+VT
Sbjct: 652 IRLLDSVPPTAISHFKQSAEKLIEEKGAVEALAAALAHISGATS-VDQRSLINSQAGFVT 710
Query: 252 LQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAV---------FD 302
+ + M +S + +++G+ D +V+G V FD
Sbjct: 711 M-----------ILRCSIEMPNISYAWKELKEQLGE---SIDAKVKGMVFLKGKLGVCFD 756
Query: 303 LPEEIAKELLNKQIPPGN-TISKITKLPALQDDGPSSDNYGRFSSRD------RFSRGGG 355
+ E E+ K ++ T+ P L +GP GR RD R RGG
Sbjct: 757 VRTEAVTEIQEKWHDSRRWQLTVATEQPEL--EGPPDGYRGRMGQRDGSRGAFRGQRGGS 814
Query: 356 SRFSRGGARGGAR--------GGGSMDRRGFRSSRSWG 385
F G RGG+R GG +R F S+++G
Sbjct: 815 RNFRGQGQRGGSRNFRGQRPGGGNRGQKRSF--SKAFG 850
>sp|Q9NR30|DDX21_HUMAN Nucleolar RNA helicase 2 OS=Homo sapiens GN=DDX21 PE=1 SV=5
Length = 783
Score = 188 bits (477), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 216/406 (53%), Gaps = 45/406 (11%)
Query: 14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALT 72
+G + +K A ++ AI T + ++ D+I VY+ G+TI+F +TK++A E+S
Sbjct: 400 IGKKTQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGHQGRTIIFCETKKEAQELSQNSA 459
Query: 73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
+++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL+I P D E
Sbjct: 460 IKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVE 519
Query: 133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
+++HRSGRTGRAG+ G I + + + +E+ G KF+ + P +++++S++
Sbjct: 520 SYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVPSATEIIKASSKDA 579
Query: 193 VATLNGVHPESVEFFTPTAQRLIEEKG-TDALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
+ L+ V P ++ F +A++LIEEKG +ALAAALA +SG + RSLIN G+VT
Sbjct: 580 IRLLDSVPPTAISHFKQSAEKLIEEKGAVEALAAALAHISGATS-VDQRSLINSNVGFVT 638
Query: 252 LQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAV---------FD 302
+ + M +S + +++G+ D +V+G V FD
Sbjct: 639 M-----------ILQCSIEMPNISYAWKELKEQLGE---EIDSKVKGMVFLKGKLGVCFD 684
Query: 303 LPEEIAKELLNKQIPPGN-TISKITKLPALQDDGPSSDNYGRFSSRDRFSRG------GG 355
+P E+ K +S T+ P L +GP + YG F + SRG G
Sbjct: 685 VPTASVTEIQEKWHDSRRWQLSVATEQPEL--EGP-REGYGGFRGQREGSRGFRGQRDGN 741
Query: 356 SRF--SRGGARG--GARGGGSMDRRGFRSSRSWGSDDEDGFSSSRG 397
RF R G+RG G R GG G +S+RS + FS + G
Sbjct: 742 RRFRGQREGSRGPRGQRSGG-----GNKSNRSQNKGQKRSFSKAFG 782
>sp|Q3B8Q1|DDX21_RAT Nucleolar RNA helicase 2 OS=Rattus norvegicus GN=Ddx21 PE=2 SV=1
Length = 782
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/403 (34%), Positives = 212/403 (52%), Gaps = 36/403 (8%)
Query: 14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALT 72
+G + +K A ++ AI T + ++ D+I VY+ G+TI+F +TK+DA E+S
Sbjct: 396 IGKKTQKAAITVEHLAIKCHWTERAAVIGDVIRVYSGHQGRTIIFCETKKDAQELSQNTC 455
Query: 73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
+++LHGDI Q QRE TL GFR G F VLVAT+VAARGLDIP VDL++ P D E
Sbjct: 456 IKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVE 515
Query: 133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
+++HRSGRTGRAG+ G I + + + +E+ G KF+ + P +++++S++
Sbjct: 516 SYIHRSGRTGRAGRTGVCICFYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDA 575
Query: 193 VATLNGVHPESVEFFTPTAQRLIEEKG-TDALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
+ L+ V P ++ F +A++LIEEKG +ALAAALA +SG + RSLIN + G+VT
Sbjct: 576 IRLLDSVPPTAIGHFKQSAEKLIEEKGAVEALAAALAHISGATS-VDQRSLINSQAGFVT 634
Query: 252 LQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAV---------FD 302
+ + M +S + +++G+ D +V+G V FD
Sbjct: 635 M-----------ILRCSVEMPNISYAWKELKEQLGE---SIDAKVKGMVFLKGKLGVCFD 680
Query: 303 LPEEIAKELLNKQIPPGN-TISKITKLPALQDDGPSSDNYGRFSSRD------RFSRGGG 355
+ E E+ K ++ T+ P L +GP G RD R RGG
Sbjct: 681 VRTEAVTEIKEKWHDSRRWQLTVATEQPEL--EGPPEGYRGGRGQRDGSRGSFRGQRGGS 738
Query: 356 SRFSRGGARGGARG-GGSMDRRGFRSSRSWGSDDEDGFSSSRG 397
F G RGG+R G G +S+RS + FS + G
Sbjct: 739 RNFRGQGQRGGSRNFRGQRPGGGNKSNRSPNKGQKRSFSKAFG 781
>sp|Q9BQ39|DDX50_HUMAN ATP-dependent RNA helicase DDX50 OS=Homo sapiens GN=DDX50 PE=1 SV=1
Length = 737
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/331 (37%), Positives = 190/331 (57%), Gaps = 10/331 (3%)
Query: 14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALT 72
VG +K A ++ AI + + ++ D++ VY+ G+ I+F +TK++ E+++
Sbjct: 351 VGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPH 410
Query: 73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
++ LHGDI+Q QRE TL GFR+G F VLVAT+VAARGLDIP VDL+I P D E
Sbjct: 411 IKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVE 470
Query: 133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
+++HRSGRTGRAG+ G I + +R +R +E+ G F+ V P D+++S +
Sbjct: 471 SYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDA 530
Query: 193 VATLNGVHPESVEFFTPTAQRLIEEKG-TDALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
+ +L V +V+FF P+AQRLIEEKG DALAAALA +SG S RSLI ++G+VT
Sbjct: 531 IRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGAS-SFEPRSLITSDKGFVT 589
Query: 252 LQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKEL 311
+ L + + + LS A +I ++ ++ + G FD+P ++ L
Sbjct: 590 MTLESLEEIQDVSCAWKELNRKLSS---NAVSQITRMCLLKGN--MGVCFDVPTTESERL 644
Query: 312 LNKQIPPGNTISKITKLPALQD--DGPSSDN 340
+ +S KLP +++ DG +S N
Sbjct: 645 QAEWHDSDWILSVPAKLPEIEEYYDGNTSSN 675
>sp|Q99MJ9|DDX50_MOUSE ATP-dependent RNA helicase DDX50 OS=Mus musculus GN=Ddx50 PE=2 SV=1
Length = 734
Score = 185 bits (469), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 189/331 (57%), Gaps = 10/331 (3%)
Query: 14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYA-KGGKTIVFTQTKRDADEVSLALT 72
VG +K A ++ AI + + ++ D++ VY+ G+ I+F +TK++ E+++
Sbjct: 348 VGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPH 407
Query: 73 SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPE 132
++ LHGDI+Q QRE TL GFR+G F VLVAT+VAARGLDIP VDL+I P D E
Sbjct: 408 IKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVE 467
Query: 133 TFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQV 192
+++HRSGRTGRAG+ G + + +R +R +E+ G F+ V P D+++S +
Sbjct: 468 SYIHRSGRTGRAGRTGICVCFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDA 527
Query: 193 VATLNGVHPESVEFFTPTAQRLIEEKG-TDALAAALAQLSGFSRPPSSRSLINHEQGWVT 251
+ +L V +V+FF P+AQRLIEEKG DALAAALA +SG S RSLI ++G+VT
Sbjct: 528 IRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGAS-SFEPRSLITSDKGFVT 586
Query: 252 LQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKEL 311
+ L + + + LS A + ++ ++ + G FD+P ++ L
Sbjct: 587 MTLESPEEIQDVSCAWKELNRKLSS---NAVSHVTRMCLLKGN--MGVCFDVPTSESERL 641
Query: 312 LNKQIPPGNTISKITKLPALQD--DGPSSDN 340
+ +S KLP +++ DG +S N
Sbjct: 642 QAEWHDSDWILSVPAKLPEIEEYYDGNTSSN 672
>sp|Q41382|RH7_SPIOL DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia oleracea GN=RH7
PE=2 SV=1
Length = 685
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/324 (36%), Positives = 180/324 (55%), Gaps = 14/324 (4%)
Query: 14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTS 73
V +Q K + ++ I +A+++ ++ D+I Y GG++I+FT+TK A +++ LT
Sbjct: 324 VSDQKMKASISVRHIVIPCSASARPDLIPDIIRCYGSGGRSIIFTETKESASQLAGLLT- 382
Query: 74 IIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 133
+ LHGDI Q QRE TL GFR GKF LVAT+VAARGLDI +V LII E P D E
Sbjct: 383 --GARPLHGDIQQTQREVTLKGFRTGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVED 440
Query: 134 FVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVV 193
++HRSGRTGRAG G A++++ +R +V +ER+ G KFE +S P DV ++ +
Sbjct: 441 YIHRSGRTGRAGNTGVAVMLY-DPKRSSVTKIERESGVKFEHLSAPQPVDVAKAVGIEAA 499
Query: 194 ATLNGVHPESVEFFTPTAQRLIEEKG---TDALAAALAQLSGFSRPPSSRSLINHEQGWV 250
A + + + F A+ L+ G D L+ ALA+ +G+S RSL+ +G+V
Sbjct: 500 AAILQISDSVIPAFKDAAEELLSTSGLSAVDILSKALAKAAGYSD-IKERSLLTGMEGYV 558
Query: 251 TLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLP-EEIAK 309
TL L F + + FL T AD I + + AD GAVFD+P +++
Sbjct: 559 TLLLDAGRPFYGQSFAYTVLKRFLP---ATKADSIMGVALTADK--SGAVFDVPVDDLET 613
Query: 310 ELLNKQIPPGNTISKITKLPALQD 333
L+ + G + + LP L++
Sbjct: 614 FLVGAENAAGVNLDVVKALPPLEE 637
>sp|Q39189|RH7_ARATH DEAD-box ATP-dependent RNA helicase 7 OS=Arabidopsis thaliana
GN=RH7 PE=1 SV=2
Length = 671
Score = 175 bits (444), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 120/329 (36%), Positives = 177/329 (53%), Gaps = 17/329 (5%)
Query: 14 VGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTS 73
VGN K + ++ AI + ++ D+I+ Y+ GG+TI+F +TK E+S L
Sbjct: 313 VGNDKMKASNSVRHIAIPCNKAAMARLIPDIISCYSSGGQTIIFAETKVQVSELSGLLD- 371
Query: 74 IIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 133
S ALHG+I Q QRE TL GFR GKF LVAT+VAARGLDI +V LII E P + E
Sbjct: 372 --GSRALHGEIPQSQREVTLAGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEA 429
Query: 134 FVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVV 193
++HRSGRTGRAG G A+ ++ S++ +V +E++ G KFE ++ P +++ S +
Sbjct: 430 YIHRSGRTGRAGNTGVAVTLY-DSRKSSVSRIEKEAGIKFEHLAAPQPDEIARSGGMEAA 488
Query: 194 ATLNGVHPESVEFFTPTAQRLIEEKGTDA---LAAALAQLSGFSRPPSSRSLINHEQGWV 250
+ V V F A+ L+E G A LA ALA+ +GF+ RSL+ + +V
Sbjct: 489 EKVKQVCDSVVPAFLEAAKELLETSGLSAEVLLAKALAKTAGFTE-IKKRSLLTSMENYV 547
Query: 251 TLQLTRDSAFSRGFMSARSVMGFLSDVYP-TAADEIGKIHIIADDRVQGAVFDLPE-EIA 308
TL L + S V G L V P + I + + AD GAVFD+ + ++
Sbjct: 548 TLHLEA----GKPIYSPSFVYGLLRRVLPDDKVEMIEGLSLTADK--TGAVFDVKQSDLD 601
Query: 309 KELLNKQIPPGNTISKITK-LPALQDDGP 336
+ Q G+ ++ K +P LQ+ P
Sbjct: 602 LFIAGAQKSAGSMSLEVVKVMPKLQEREP 630
>sp|Q5L3G9|CSHA_GEOKA DEAD-box ATP-dependent RNA helicase CshA OS=Geobacillus
kaustophilus (strain HTA426) GN=cshA PE=3 SV=1
Length = 467
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 123/223 (55%), Gaps = 5/223 (2%)
Query: 19 EKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IAS 77
E I+ Y + K IL+ L+ + A IVF +TKR DE++ AL A+
Sbjct: 209 EMTVPNIQQYYLEVHEKKKFDILTRLLDIQAPE-LAIVFGRTKRRVDELAEALNLRGYAA 267
Query: 78 EALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHR 137
E +HGD+SQ +R L F++G +LVATDVAARGLDI V + ++++P DPE++VHR
Sbjct: 268 EGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAARGLDISGVTHVYNFDIPQDPESYVHR 327
Query: 138 SGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVV-ATL 196
GRTGRAGK G A+ T + + +ER K E + PP +++ LE + L
Sbjct: 328 IGRTGRAGKTGVAMTFVTPREIGQLHHIERTTKRKMERMKPPTLDEALEGQQRIAIEKLL 387
Query: 197 NGVHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 239
N V E++ F+ A+ L+EE D++ A L +R P +
Sbjct: 388 NVVETENLSFYKRAAEELLEEH--DSVTIVAACLKMLTREPDT 428
>sp|Q73EU1|CSHA_BACC1 DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus cereus (strain
ATCC 10987) GN=cshA PE=3 SV=1
Length = 525
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 125/217 (57%), Gaps = 5/217 (2%)
Query: 25 IKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHGD 83
I+ + + K +L+ L+ + + IVF +TKR DE+S AL A+E +HGD
Sbjct: 215 IQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGD 273
Query: 84 ISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGR 143
++Q +R L F++G VLVATDVAARGLDI V + ++++P DPE++VHR GRTGR
Sbjct: 274 LTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGR 333
Query: 144 AGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATL-NGVHPE 202
AGK+G A+L T + ++++ER K + + P +++ LE + L N + E
Sbjct: 334 AGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQNTIENE 393
Query: 203 SVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 239
++ ++ A+ ++EE D++ A L ++ P +
Sbjct: 394 NLAYYKRIAEEMLEE--NDSVTVVAAALKMMTKEPDT 428
>sp|Q6HPE6|CSHA_BACHK DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus thuringiensis
subsp. konkukian (strain 97-27) GN=cshA PE=3 SV=1
Length = 528
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 124/218 (56%), Gaps = 5/218 (2%)
Query: 24 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 82
I+ + + K +L+ L+ + + IVF +TKR DE+S AL A+E +HG
Sbjct: 214 NIQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHG 272
Query: 83 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 142
D++Q +R L F++G VLVATDVAARGLDI V + ++++P DPE++VHR GRTG
Sbjct: 273 DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTG 332
Query: 143 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHP 201
RAGK+G A+L T + ++++ER K + + P +++ LE + L +
Sbjct: 333 RAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIEN 392
Query: 202 ESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 239
E++ ++ A+ ++EE D++ A L ++ P +
Sbjct: 393 ENLAYYKRIAEEMLEE--NDSVTVVAAALKMMTKEPDT 428
>sp|Q81VG0|CSHA_BACAN DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus anthracis
GN=cshA PE=3 SV=1
Length = 528
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 124/218 (56%), Gaps = 5/218 (2%)
Query: 24 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 82
I+ + + K +L+ L+ + + IVF +TKR DE+S AL A+E +HG
Sbjct: 214 NIQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHG 272
Query: 83 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 142
D++Q +R L F++G VLVATDVAARGLDI V + ++++P DPE++VHR GRTG
Sbjct: 273 DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTG 332
Query: 143 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHP 201
RAGK+G A+L T + ++++ER K + + P +++ LE + L +
Sbjct: 333 RAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIEN 392
Query: 202 ESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 239
E++ ++ A+ ++EE D++ A L ++ P +
Sbjct: 393 ENLAYYKRIAEEMLEE--NDSVTVVAAALKMMTKEPDT 428
>sp|A0R8U6|CSHA_BACAH DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus thuringiensis
(strain Al Hakam) GN=cshA PE=3 SV=1
Length = 528
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 124/218 (56%), Gaps = 5/218 (2%)
Query: 24 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 82
I+ + + K +L+ L+ + + IVF +TKR DE+S AL A+E +HG
Sbjct: 214 NIQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHG 272
Query: 83 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 142
D++Q +R L F++G VLVATDVAARGLDI V + ++++P DPE++VHR GRTG
Sbjct: 273 DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTG 332
Query: 143 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHP 201
RAGK+G A+L T + ++++ER K + + P +++ LE + L +
Sbjct: 333 RAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIEN 392
Query: 202 ESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 239
E++ ++ A+ ++EE D++ A L ++ P +
Sbjct: 393 ENLAYYKRIAEEMLEE--NDSVTVVAAALKMMTKEPDT 428
>sp|Q63GX5|CSHA_BACCZ DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus cereus (strain
ZK / E33L) GN=cshA PE=3 SV=1
Length = 528
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 124/218 (56%), Gaps = 5/218 (2%)
Query: 24 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 82
I+ + + K +L+ L+ + + IVF +TKR DE+S AL A+E +HG
Sbjct: 214 NIQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHG 272
Query: 83 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 142
D++Q +R L F++G VLVATDVAARGLDI V + ++++P DPE++VHR GRTG
Sbjct: 273 DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTG 332
Query: 143 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHP 201
RAGK+G A+L T + ++++ER K + + P +++ LE + L +
Sbjct: 333 RAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIEN 392
Query: 202 ESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 239
E++ ++ A+ ++EE D++ A L ++ P +
Sbjct: 393 ENLAYYKRIAEEMLEE--NDSVTVVAAALKMMTKEPDT 428
>sp|Q81IT9|CSHA_BACCR DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus cereus (strain
ATCC 14579 / DSM 31) GN=cshA PE=3 SV=2
Length = 533
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 124/218 (56%), Gaps = 5/218 (2%)
Query: 24 GIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEALHG 82
I+ + + K +L+ L+ + + IVF +TKR DE+S AL A+E +HG
Sbjct: 214 NIQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHG 272
Query: 83 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 142
D++Q +R L F++G VLVATDVAARGLDI V + ++++P DPE++VHR GRTG
Sbjct: 273 DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTG 332
Query: 143 RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNG-VHP 201
RAGK+G A+L T + ++++ER K + + P +++ LE + L +
Sbjct: 333 RAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIEN 392
Query: 202 ESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSS 239
E++ ++ A+ ++EE D++ A L ++ P +
Sbjct: 393 ENLAYYKRIAEEMLEE--NDSVTVVAAALKMMTKEPDT 428
>sp|Q4WP13|DED1_ASPFU ATP-dependent RNA helicase ded1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ded1
PE=3 SV=1
Length = 674
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 95/160 (59%), Gaps = 5/160 (3%)
Query: 7 MFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 66
+F +VG+ E + + ++ KR++L D++ + G T++F +TKR AD
Sbjct: 410 VFLSVGRVGSTSENITQKVEY----VEDHDKRSVLLDILHTHGTSGLTLIFVETKRMADA 465
Query: 67 VS-LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
+S L + A+HGD +Q +RER L FR G+ +LVAT VAARGLDIPNV +I+Y
Sbjct: 466 LSDFLLNQRFPATAIHGDRTQRERERALEMFRSGRCPILVATAVAARGLDIPNVTHVINY 525
Query: 126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
+LP D + +VHR GRTGRAG G A F S R VR L
Sbjct: 526 DLPTDIDDYVHRIGRTGRAGNTGIATAFFNRSNRGVVREL 565
>sp|C8V8H4|DED1_EMENI ATP-dependent RNA helicase ded1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ded1
PE=3 SV=1
Length = 668
Score = 125 bits (314), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 95/160 (59%), Gaps = 5/160 (3%)
Query: 7 MFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 66
+F +VG+ E + + ++ KR++L D++ + G T++F +TKR AD
Sbjct: 406 VFLSVGRVGSTSENITQKVEY----VEDHDKRSVLLDILHTHGTTGLTLIFVETKRMADA 461
Query: 67 VS-LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
+S + + A+HGD +Q +RER L FR G++ +LVAT VAARGLDIPNV +I+Y
Sbjct: 462 LSEFLINQRFPATAIHGDRTQRERERALEMFRSGRYPILVATAVAARGLDIPNVTHVINY 521
Query: 126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
+LP D + +VHR GRTGRAG G A F R VR L
Sbjct: 522 DLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDL 561
>sp|Q2HBE7|DED1_CHAGB ATP-dependent RNA helicase DED1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=DED1 PE=3 SV=1
Length = 688
Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 99/166 (59%), Gaps = 7/166 (4%)
Query: 1 MLNYFVMFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQT 60
LN +V S +VG+ E + + ++ KR++L D++ +A GG T++F +T
Sbjct: 412 FLNDYVFLS-VGRVGSTSENITQKVEY----VEDVDKRSVLLDILHTHA-GGLTLIFVET 465
Query: 61 KRDADEVS-LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNV 119
KR AD +S + + ++HGD +Q +RER L FR GK +LVAT VAARGLDIPNV
Sbjct: 466 KRMADSLSDFLINQNFPATSIHGDRTQRERERALELFRNGKCPILVATAVAARGLDIPNV 525
Query: 120 DLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
+I+Y+LP D + +VHR GRTGRAG G A F R VR L
Sbjct: 526 THVINYDLPTDVDDYVHRIGRTGRAGNTGIATAFFNRGNRGIVREL 571
>sp|Q4P733|DED1_USTMA ATP-dependent RNA helicase DED1 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=DED1 PE=3 SV=1
Length = 672
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 97/160 (60%), Gaps = 5/160 (3%)
Query: 7 MFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 66
+F +VG+ E + + I+ KR++L D++ GG T++F +TKR AD
Sbjct: 410 VFLSVGRVGSTSENITQKIEY----VEDDDKRSVLLDVLASMPSGGLTLIFVETKRMADM 465
Query: 67 VS-LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
+S L S I + ++HGD +Q +RER L FR GK ++VAT VAARGLDIPNV +++Y
Sbjct: 466 LSDFLLRSKIGATSIHGDRTQRERERALELFRSGKTPIMVATAVAARGLDIPNVTHVVNY 525
Query: 126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
+LP+D + +VHR GRTGRAG G A F + VR L
Sbjct: 526 DLPSDVDDYVHRIGRTGRAGNVGHATAFFNRGNKNIVRDL 565
>sp|A1CXK7|DED1_NEOFI ATP-dependent RNA helicase ded1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ded1
PE=3 SV=1
Length = 676
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 94/160 (58%), Gaps = 5/160 (3%)
Query: 7 MFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 66
+F +VG+ E + + ++ KR++L D++ + G T++F +TKR AD
Sbjct: 412 VFLSVGRVGSTSENITQKVEY----VEDHDKRSVLLDILHTHGTSGLTLIFVETKRMADA 467
Query: 67 VS-LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
+S L + A+HGD +Q +RER L FR G+ +LVAT VAARGLDIPNV +I+Y
Sbjct: 468 LSDFLLNQRFPATAIHGDRTQRERERALEMFRSGRCPILVATAVAARGLDIPNVTHVINY 527
Query: 126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
+LP D + +VHR GRTGRAG G A F R VR L
Sbjct: 528 DLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVREL 567
>sp|Q2UGK3|DED1_ASPOR ATP-dependent RNA helicase ded1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=ded1 PE=3 SV=1
Length = 675
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 94/160 (58%), Gaps = 5/160 (3%)
Query: 7 MFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 66
+F +VG+ E + + ++ KR++L D++ + G T++F +TKR AD
Sbjct: 408 VFLSVGRVGSTSENITQKVEY----VEDHDKRSVLLDILHTHGTSGLTLIFVETKRMADS 463
Query: 67 VS-LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
+S L + A+HGD +Q +RER L FR G+ +LVAT VAARGLDIPNV +I+Y
Sbjct: 464 LSDFLLNQRFPATAIHGDRTQRERERALEMFRSGRCPILVATAVAARGLDIPNVTHVINY 523
Query: 126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
+LP D + +VHR GRTGRAG G A F R VR L
Sbjct: 524 DLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDL 563
>sp|A2QI25|DED1_ASPNC ATP-dependent RNA helicase ded1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=ded1 PE=3 SV=1
Length = 678
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 94/160 (58%), Gaps = 5/160 (3%)
Query: 7 MFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 66
+F +VG+ E + + ++ KR++L D++ + G T++F +TKR AD
Sbjct: 409 VFLSVGRVGSTSENITQKVEY----VEDHDKRSVLLDILHTHGTSGLTLIFVETKRMADS 464
Query: 67 VS-LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
+S L + A+HGD +Q +RER L FR G+ +LVAT VAARGLDIPNV +I+Y
Sbjct: 465 LSDFLLNQRFPATAIHGDRTQRERERALEMFRSGRCPILVATAVAARGLDIPNVTHVINY 524
Query: 126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
+LP D + +VHR GRTGRAG G A F R VR L
Sbjct: 525 DLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDL 564
>sp|P96614|CSHA_BACSU DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus subtilis
(strain 168) GN=cshA PE=1 SV=2
Length = 494
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 4/185 (2%)
Query: 55 IVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 113
IVF +TKR DE++ AL A+E +HGD++Q +R L F++G VLVATDVAARG
Sbjct: 245 IVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDVAARG 304
Query: 114 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKF 173
LDI V + ++++P DPE++VHR GRTGRAGK G A+ T ++ +R++E+ K
Sbjct: 305 LDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLRAIEQTTKRKM 364
Query: 174 EFVSPPVVEDVLESSAEQVVATL-NGVHPESVEFFTPTAQRLIEEKGTDALAAALAQLSG 232
+ + P +++ LE + V L + ++ F+ A L+E+ DA+ A +
Sbjct: 365 DRMKEPTLDEALEGQQQVTVERLRTTISENNLNFYMTAAAELLEDH--DAVTVVAAAIKM 422
Query: 233 FSRPP 237
++ P
Sbjct: 423 ATKEP 427
>sp|Q9P6U9|DED1_NEUCR ATP-dependent RNA helicase ded-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ded-1 PE=3 SV=1
Length = 688
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 96/160 (60%), Gaps = 6/160 (3%)
Query: 7 MFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 66
+F +VG+ E + + ++ KR++L D++ +A GG T++F +TKR AD
Sbjct: 414 IFLSVGRVGSTSENITQKVEY----VEDIDKRSVLLDILHTHA-GGLTLIFVETKRMADS 468
Query: 67 VS-LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
+S + + ++HGD +Q +RER L FR G+ +LVAT VAARGLDIPNV +I+Y
Sbjct: 469 LSDFLINQNFPATSIHGDRTQRERERALEMFRNGRCPILVATAVAARGLDIPNVTHVINY 528
Query: 126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
+LP D + +VHR GRTGRAG G A F R VR L
Sbjct: 529 DLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVREL 568
>sp|Q75B50|DED1_ASHGO ATP-dependent RNA helicase DED1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DED1
PE=3 SV=2
Length = 623
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 104/182 (57%), Gaps = 18/182 (9%)
Query: 22 AEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS-LALTSIIASEAL 80
+E I + KR++L DL+ + GG T+VF +TKR AD ++ + +++ A+
Sbjct: 374 SENITQKVLHVEDIDKRSVLLDLLAA-SDGGLTLVFVETKRMADALTDFLIMQNLSATAI 432
Query: 81 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 140
HGD +Q +RER L FR G+ VLVAT VAARGLDIPNV +I+Y+LP+D + +VHR GR
Sbjct: 433 HGDRTQAERERALAFFRTGRANVLVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGR 492
Query: 141 TGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVH 200
TGRAG G A F + V+ L D+LE + ++V + L+ +
Sbjct: 493 TGRAGNTGLATAFFNRGNKNVVKEL----------------VDILEEANQEVPSFLSQIA 536
Query: 201 PE 202
E
Sbjct: 537 KE 538
>sp|Q65N62|CSHA_BACLD DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus licheniformis
(strain DSM 13 / ATCC 14580) GN=cshA PE=3 SV=1
Length = 487
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Query: 55 IVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 113
IVF +TKR DE++ AL +E +HGD++Q +R L F+QG VLVATDVAARG
Sbjct: 245 IVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAARG 304
Query: 114 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKF 173
LDI V + ++++P DPE++VHR GRTGRAGK G A+ T ++ +R++E+ K
Sbjct: 305 LDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAIEQTTKRKM 364
Query: 174 EFVSPPVVEDVLESSAEQVVATLNGVHPE-SVEFFTPTAQRLIEEKGTDALAAALAQLSG 232
+ + P +++ +E + V + + E ++ F+ A L+E+ D++ A +
Sbjct: 365 DRMKAPTLDEAIEGQQQVTVDRIRTIIEENNLNFYMTAAAELLEDH--DSVTVVAAAIKM 422
Query: 233 FSRPPSS 239
++ P +
Sbjct: 423 MTKEPDN 429
>sp|A1CH78|DED1_ASPCL ATP-dependent RNA helicase ded1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=ded1 PE=3 SV=1
Length = 681
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
Query: 7 MFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 66
+F +VG+ E + + ++ KR++L D++ + G T++F +TKR AD
Sbjct: 411 VFLSVGRVGSTSENITQKVEY----VEDVDKRSVLLDILHTHGTSGLTLIFVETKRMADA 466
Query: 67 VS-LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
+S + + A+HGD +Q +RER L FR + +LVAT VAARGLDIPNV +I+Y
Sbjct: 467 LSDFLINQRFPATAIHGDRTQRERERALEMFRSARCPILVATAVAARGLDIPNVTHVINY 526
Query: 126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
+LP D + +VHR GRTGRAG G A F R VR L
Sbjct: 527 DLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVREL 566
>sp|Q0CLJ6|DED1_ASPTN ATP-dependent RNA helicase ded1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=ded1 PE=3 SV=1
Length = 674
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
Query: 7 MFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 66
+F +VG+ E + + ++ KR++L D++ + G T++F +TKR AD
Sbjct: 408 VFLSVGRVGSTSENITQKVEY----VEDHDKRSVLLDILHTHGTSGLTLIFVETKRMADS 463
Query: 67 VS-LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
+S L + A+HGD +Q +RER L FR G+ +LVAT VAA GLDIPNV +I+Y
Sbjct: 464 LSDFLLNQRFPATAIHGDRTQRERERALEMFRSGRCPILVATAVAASGLDIPNVTHVINY 523
Query: 126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
+LP D + +VHR GRTGRAG G A F R VR L
Sbjct: 524 DLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDL 563
>sp|A7TKR8|DED1_VANPO ATP-dependent RNA helicase DED1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DED1 PE=3 SV=1
Length = 650
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 106/183 (57%), Gaps = 7/183 (3%)
Query: 7 MFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 66
+F +VG+ E + + I LY K++ L DL++ + G T++F +TKR ADE
Sbjct: 378 IFLSVGKVGSTSENITQRI-LYV---EDMDKKSTLLDLLSA-SNDGLTLIFVETKRMADE 432
Query: 67 VS-LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
++ + + A+HGD +Q +RER L F+ G +LVAT VAARGLDIPNV +++Y
Sbjct: 433 LTDFLIMQDFRATAIHGDRTQSERERALAAFKNGNANLLVATAVAARGLDIPNVTHVVNY 492
Query: 126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
+LP+D + +VHR GRTGRAG G A F R V+ + + + + PP + DV+
Sbjct: 493 DLPSDIDDYVHRIGRTGRAGNTGVATAFFNRGNRNIVKGMYELLAEANQEI-PPFLNDVM 551
Query: 186 ESS 188
S
Sbjct: 552 RES 554
>sp|Q5A4E2|DED1_CANAL ATP-dependent RNA helicase DED1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DED1 PE=3 SV=1
Length = 672
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 99/160 (61%), Gaps = 6/160 (3%)
Query: 7 MFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 66
+F +VG+ E + + I LY K++++ DL++ + G TIVFT+TKR AD
Sbjct: 404 VFLSVGRVGSTSENITQKI-LY---VEDDEKKSVILDLLSA-NENGLTIVFTETKRMADN 458
Query: 67 VSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
++ L + A+HGD SQ++RE+ L F+ G +LVAT VAARGLDIPNV +I+Y
Sbjct: 459 LADYLYDQGFPATAIHGDRSQYEREKALAAFKNGAAPILVATAVAARGLDIPNVSHVINY 518
Query: 126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
+LP+D + +VHR GRTGRAG G A F + + V+ L
Sbjct: 519 DLPSDIDDYVHRIGRTGRAGNVGIATAFFNRNNKNVVKGL 558
>sp|P57453|DEAD_BUCAI Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=deaD PE=3 SV=1
Length = 601
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
Query: 54 TIVFTQTKRDADEVSLALT-SIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAAR 112
TI+F +TK EVS AL + S AL+GD++Q RE+TL + G+ +L+ATDVAAR
Sbjct: 247 TIIFVRTKNATLEVSEALERNGYNSAALNGDMNQALREQTLERLKNGRLDILIATDVAAR 306
Query: 113 GLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCK 172
GLD+ + +I+Y++P D E++VHR GRTGRAG+ G A+L + +RR +R++ER +
Sbjct: 307 GLDVDRISFVINYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKQS 366
Query: 173 FEFVSPPVVEDVLESSAEQVVATL-NGVHPESVEFFTPTAQRLIEEKGTD--ALAAALAQ 229
V P VE + + EQ + + ++ ++ +L D LAAAL +
Sbjct: 367 IPEVQLPKVELLCQRRLEQFAKKVQQQLESRDLDEYSALLDKLYSTDDLDIKTLAAALLK 426
Query: 230 LSGFSRP 236
++ RP
Sbjct: 427 MAQGERP 433
>sp|Q89AF9|DEAD_BUCBP Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=deaD PE=3 SV=1
Length = 602
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 54 TIVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAAR 112
TI+F +TK EVS L S AL+GD++Q RE+TL + G+ +L+ATDVAAR
Sbjct: 247 TIIFVRTKNATLEVSEVLERYGYNSAALNGDMNQSLREQTLEKLKDGRLDILIATDVAAR 306
Query: 113 GLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCK 172
GLD+ + +I+Y++P D E++VHR GRTGRAG++G A+L + +RR +R++ER +
Sbjct: 307 GLDVDRISFVINYDIPMDSESYVHRIGRTGRAGRKGKALLFVENRERRLLRNIERAMNIS 366
Query: 173 FEFVSPP----VVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAALA 228
V+ P + + LE A++V L+ P Q ++LAAAL
Sbjct: 367 ISEVNLPKSDFLSKRRLEKFAQKVQIQLDSKDLHEYRGLLPKLQPNNNSLDIESLAAALL 426
Query: 229 QLS 231
+++
Sbjct: 427 KMA 429
>sp|A3LQ01|DED1_PICST ATP-dependent RNA helicase DED1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DED1 PE=3 SV=3
Length = 647
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 98/160 (61%), Gaps = 6/160 (3%)
Query: 7 MFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 66
+F +VG+ E + + I LY K+++L DL++ G TI+FT+TKR AD
Sbjct: 386 IFLSVGRVGSTSENITQKI-LY---VEDEEKKSVLLDLLSA-GDAGLTIIFTETKRMADN 440
Query: 67 VSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
++ L + A+HGD SQ++RE+ L F+ G +LVAT VAARGLDIPNV +I+Y
Sbjct: 441 LADFLYDQGFPATAIHGDRSQYEREKALAAFKSGAAPILVATAVAARGLDIPNVAHVINY 500
Query: 126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
+LP+D + +VHR GRTGRAG G A F + + V+ L
Sbjct: 501 DLPSDIDDYVHRIGRTGRAGNVGIATAFFNRNNKNVVKGL 540
>sp|Q6BU54|DED1_DEBHA ATP-dependent RNA helicase DED1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DED1 PE=3 SV=1
Length = 630
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 98/160 (61%), Gaps = 6/160 (3%)
Query: 7 MFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 66
+F +VG+ E + + I LY K+++L DL++ G TI+FT+TKR AD
Sbjct: 374 IFLSVGRVGSTSENITQKI-LY---VEDEEKKSVLLDLLSA-NDNGLTIIFTETKRMADN 428
Query: 67 VSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
++ L + A+HGD SQ++RE+ L F+ G +LVAT VAARGLDIPNV I++Y
Sbjct: 429 LADFLYDQGFPATAIHGDRSQYEREKALAAFKTGTAPILVATAVAARGLDIPNVSHIVNY 488
Query: 126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
+LP+D + +VHR GRTGRAG G A F + + V+ L
Sbjct: 489 DLPSDIDDYVHRIGRTGRAGNIGIATAFFNRNNKNIVKGL 528
>sp|A5DZE6|DED1_LODEL ATP-dependent RNA helicase DED1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DED1 PE=3 SV=1
Length = 664
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 92/145 (63%), Gaps = 2/145 (1%)
Query: 22 AEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSI-IASEAL 80
+E I + K++++ DL+ ++G TIVFT+TKR AD ++ L + A+
Sbjct: 404 SENITQKVLYVEDEEKKSVILDLLNANSEG-LTIVFTETKRMADNLADFLYDQGFPATAI 462
Query: 81 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 140
HGD SQ++RE+ L F+ G+ +LVAT VAARGLDIPNV +I+Y+LP+D + +VHR GR
Sbjct: 463 HGDRSQYEREKALAAFKSGQAPILVATAVAARGLDIPNVSHVINYDLPSDIDDYVHRIGR 522
Query: 141 TGRAGKEGTAILMFTSSQRRTVRSL 165
TGRAG G A F + + V+ +
Sbjct: 523 TGRAGNVGIATAFFNRNNKNIVKGM 547
>sp|A5DQS0|DED1_PICGU ATP-dependent RNA helicase DED1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DED1 PE=3 SV=3
Length = 637
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 97/160 (60%), Gaps = 6/160 (3%)
Query: 7 MFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 66
+F +VG+ E + + + LY K+++L DL++ G TI+FT+TKR AD
Sbjct: 387 IFLSVGRVGSTSENITQKV-LY---VEDDEKKSVLLDLLSA-NDNGLTIIFTETKRMADN 441
Query: 67 VSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
++ L + A+HGD SQ++RE+ L F+ G +LVAT VAARGLDIPNV +++Y
Sbjct: 442 LADFLYDQGFPATAIHGDRSQYEREKALAAFKSGTAPILVATAVAARGLDIPNVSHVVNY 501
Query: 126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
+LP D + +VHR GRTGRAG G A F + R V+ +
Sbjct: 502 DLPGDIDDYVHRIGRTGRAGNVGIATAFFNRNNRNVVKGM 541
>sp|Q4I7K4|DED1_GIBZE ATP-dependent RNA helicase DED1 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DED1 PE=3
SV=1
Length = 675
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 108/198 (54%), Gaps = 22/198 (11%)
Query: 7 MFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 66
+F +VG+ E + + ++ KR++L D++ +A G T++F +TKR AD
Sbjct: 406 IFLSVGRVGSTSENITQKVEY----VEDVDKRSVLLDILHSHANG-LTLIFVETKRMADS 460
Query: 67 VS-LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
+S + + ++HGD +Q +RER L FR G+ +LVAT VAARGLDIP+V +I+Y
Sbjct: 461 LSDFLINQNFPATSIHGDRTQRERERALEFFRNGRCPILVATAVAARGLDIPHVTHVINY 520
Query: 126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
+LP D + +VHR GRTGRAG G A F R VR L D+L
Sbjct: 521 DLPTDVDDYVHRIGRTGRAGNTGIATAFFNRGNRGIVREL----------------MDLL 564
Query: 186 ESSAEQVVATLNGVHPES 203
+ + ++V A L + ES
Sbjct: 565 KEANQEVPAFLETIARES 582
>sp|Q1DJF0|DED1_COCIM ATP-dependent RNA helicase DED1 OS=Coccidioides immitis (strain RS)
GN=DED1 PE=3 SV=2
Length = 665
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 94/160 (58%), Gaps = 6/160 (3%)
Query: 7 MFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 66
+F +VG+ E + + ++ KR++L D++ + G T++F +TKR AD
Sbjct: 403 VFLSVGRVGSTSENITQKVEY----VEDADKRSVLLDILHTHGTG-LTLIFVETKRMADS 457
Query: 67 VS-LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
+S + + A+HGD +Q +RER L FR G+ +LVAT VAARGLDIPNV +++Y
Sbjct: 458 LSEFLINQNFPATAIHGDRTQRERERALEYFRNGRCPILVATAVAARGLDIPNVTHVVNY 517
Query: 126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
+LP D + +VHR GRTGRAG G + F R VR L
Sbjct: 518 DLPTDIDDYVHRIGRTGRAGNTGLSTAFFNRGNRGVVRDL 557
>sp|Q8TFK8|DED1_CANGA ATP-dependent RNA helicase DED1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DED1 PE=3 SV=1
Length = 617
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 103/180 (57%), Gaps = 7/180 (3%)
Query: 7 MFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 66
+F +VG+ E + + I LY K + L DL+ + T++F +TKR AD+
Sbjct: 363 IFLSVGRVGSTSENITQRI-LY---VENRDKNSALLDLLAA-SNDNLTLIFVETKRMADQ 417
Query: 67 VS-LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
++ + ++ A+HGD SQ +RER L FR G+ +LVAT VAARGLDIPNV +I+Y
Sbjct: 418 LTDFLIMQNFSATAIHGDRSQAERERALAAFRSGRANILVATAVAARGLDIPNVTHVINY 477
Query: 126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVL 185
+LP+D + +VHR GRTGRAG G A F V+ L + + + PP +ED L
Sbjct: 478 DLPSDVDDYVHRIGRTGRAGNTGVATAFFNRDNNNIVKGLYEILEEANQEI-PPFLEDCL 536
>sp|O13370|DED1_SCHPO ATP-dependent RNA helicase ded1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ded1 PE=1 SV=1
Length = 636
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 89/145 (61%), Gaps = 1/145 (0%)
Query: 22 AEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS-LALTSIIASEAL 80
+E I + + KR+ L D++ G T++F +TKR AD ++ L S + ++
Sbjct: 401 SENITQKVVHVEDSEKRSYLLDILHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSI 460
Query: 81 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 140
HGD +Q +RER L FR G+ +++VAT VA+RGLDIPNV +I+Y+LP D + +VHR GR
Sbjct: 461 HGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGR 520
Query: 141 TGRAGKEGTAILMFTSSQRRTVRSL 165
TGRAG G A+ F + + + L
Sbjct: 521 TGRAGNTGQAVAFFNRNNKGIAKEL 545
>sp|A6ZP47|DED1_YEAS7 ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DED1 PE=3 SV=1
Length = 604
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 89/146 (60%), Gaps = 2/146 (1%)
Query: 22 AEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS-LALTSIIASEAL 80
+E I + K++ L DL++ + G T++F +TKR AD+++ + + A+
Sbjct: 371 SENITQKVLYVENQDKKSALLDLLSA-STDGLTLIFVETKRMADQLTDFLIMQNFRATAI 429
Query: 81 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 140
HGD +Q +RER L FR G T+LVAT VAARGLDIPNV +I+Y+LP+D + +VHR GR
Sbjct: 430 HGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGR 489
Query: 141 TGRAGKEGTAILMFTSSQRRTVRSLE 166
TGRAG G A F S V+ L
Sbjct: 490 TGRAGNTGLATAFFNSENSNIVKGLH 515
>sp|P06634|DED1_YEAST ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DED1 PE=1 SV=2
Length = 604
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 89/146 (60%), Gaps = 2/146 (1%)
Query: 22 AEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS-LALTSIIASEAL 80
+E I + K++ L DL++ + G T++F +TKR AD+++ + + A+
Sbjct: 371 SENITQKVLYVENQDKKSALLDLLSA-STDGLTLIFVETKRMADQLTDFLIMQNFRATAI 429
Query: 81 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 140
HGD +Q +RER L FR G T+LVAT VAARGLDIPNV +I+Y+LP+D + +VHR GR
Sbjct: 430 HGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGR 489
Query: 141 TGRAGKEGTAILMFTSSQRRTVRSLE 166
TGRAG G A F S V+ L
Sbjct: 490 TGRAGNTGLATAFFNSENSNIVKGLH 515
>sp|A7EJY3|DED1_SCLS1 ATP-dependent RNA helicase ded1 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=ded1 PE=3 SV=1
Length = 678
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 94/160 (58%), Gaps = 6/160 (3%)
Query: 7 MFSHSTQVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 66
+F +VG+ E + + ++ KR++L D++ + G T++F +TKR AD
Sbjct: 406 VFLSVGRVGSTSENITQKVEY----VEDIDKRSVLLDILHTHG-AGLTLIFVETKRMADS 460
Query: 67 VS-LALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 125
+S + + ++HGD +Q +RER L FR G+ +LVAT VAARGLDIPNV +++Y
Sbjct: 461 LSDFLINQNFPATSIHGDRTQRERERALEMFRNGRCPILVATAVAARGLDIPNVTHVVNY 520
Query: 126 ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 165
+LP D + +VHR GRTGRAG G + F R VR L
Sbjct: 521 DLPTDIDDYVHRIGRTGRAGNTGISTAFFNRGNRGVVRDL 560
>sp|Q2FWH5|Y2316_STAA8 Probable DEAD-box ATP-dependent RNA helicase SAOUHSC_02316
OS=Staphylococcus aureus (strain NCTC 8325)
GN=SAOUHSC_02316 PE=3 SV=1
Length = 506
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 55 IVFTQTKRDADEVSLALTSI-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 113
IVF +TKR DE++ AL S +E LHGDI+Q +R L F+ + +LVATDVAARG
Sbjct: 244 IVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARG 303
Query: 114 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKF 173
LDI V + ++++P D E++ HR GRTGRAGKEG A+ + +R +E G K
Sbjct: 304 LDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEDANGRKM 363
Query: 174 EFVSPPVVEDVLESSAEQVVATL-NGVHPESVEFFTPTAQRLIEEKGTDALAAALAQ 229
+ PP ++VL++ + + + N + ES + L+ E L AAL Q
Sbjct: 364 SALRPPHRKEVLQAREDDIKEKVENWMSKESESRLKRISTELLNEYNDVDLVAALLQ 420
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,684,848
Number of Sequences: 539616
Number of extensions: 7345368
Number of successful extensions: 40652
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1880
Number of HSP's successfully gapped in prelim test: 554
Number of HSP's that attempted gapping in prelim test: 29852
Number of HSP's gapped (non-prelim): 7000
length of query: 456
length of database: 191,569,459
effective HSP length: 121
effective length of query: 335
effective length of database: 126,275,923
effective search space: 42302434205
effective search space used: 42302434205
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)