Query 012797
Match_columns 456
No_of_seqs 326 out of 2096
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 16:25:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012797.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012797hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.8 7.3E-18 2.5E-22 156.3 16.3 156 34-201 4-164 (195)
2 2nyi_A Unknown protein; protei 99.8 3.5E-18 1.2E-22 158.4 14.1 144 267-415 4-162 (195)
3 1u8s_A Glycine cleavage system 99.7 2.5E-16 8.4E-21 145.5 18.1 140 268-415 6-165 (192)
4 1u8s_A Glycine cleavage system 99.7 2.6E-16 8.7E-21 145.4 13.5 156 34-201 5-167 (192)
5 3p96_A Phosphoserine phosphata 98.9 2.3E-08 8E-13 102.4 16.8 122 267-393 11-149 (415)
6 3p96_A Phosphoserine phosphata 98.9 3.1E-08 1.1E-12 101.5 16.7 153 34-201 11-167 (415)
7 2f06_A Conserved hypothetical 98.6 1.3E-06 4.4E-11 76.2 14.4 110 269-390 7-116 (144)
8 2f06_A Conserved hypothetical 98.5 2.8E-06 9.5E-11 74.0 14.5 113 35-174 6-118 (144)
9 1zpv_A ACT domain protein; str 98.2 6.2E-06 2.1E-10 65.7 9.5 66 127-199 4-69 (91)
10 1zpv_A ACT domain protein; str 98.1 3E-05 1E-09 61.6 10.4 51 34-84 4-54 (91)
11 3l76_A Aspartokinase; alloster 97.9 0.0041 1.4E-07 66.5 27.0 270 36-378 271-562 (600)
12 2ko1_A CTR148A, GTP pyrophosph 97.9 5.1E-05 1.8E-09 59.6 9.1 63 127-196 4-66 (88)
13 2ko1_A CTR148A, GTP pyrophosph 97.8 8.8E-05 3E-09 58.3 8.8 64 346-414 5-68 (88)
14 2re1_A Aspartokinase, alpha an 97.7 0.00034 1.2E-08 62.3 12.8 102 267-377 24-137 (167)
15 3obi_A Formyltetrahydrofolate 97.7 0.00054 1.9E-08 66.5 14.1 115 34-163 5-124 (288)
16 3obi_A Formyltetrahydrofolate 97.6 0.0014 4.7E-08 63.7 16.4 104 268-376 6-119 (288)
17 3o1l_A Formyltetrahydrofolate 97.6 0.0004 1.4E-08 67.8 12.0 50 34-83 21-72 (302)
18 3o1l_A Formyltetrahydrofolate 97.5 0.0014 4.6E-08 64.1 14.7 98 269-373 23-132 (302)
19 3n0v_A Formyltetrahydrofolate 97.5 0.00096 3.3E-08 64.7 13.4 49 34-82 7-57 (286)
20 2re1_A Aspartokinase, alpha an 97.5 0.00058 2E-08 60.8 10.8 110 34-160 24-138 (167)
21 3nrb_A Formyltetrahydrofolate 97.5 0.00093 3.2E-08 64.8 12.6 49 34-82 6-56 (287)
22 3n0v_A Formyltetrahydrofolate 97.5 0.0021 7.3E-08 62.2 15.0 101 268-374 8-118 (286)
23 3nrb_A Formyltetrahydrofolate 97.4 0.0034 1.2E-07 60.9 15.3 102 267-375 6-117 (287)
24 3lou_A Formyltetrahydrofolate 97.4 0.0033 1.1E-07 61.1 15.1 101 268-374 10-123 (292)
25 2dtj_A Aspartokinase; protein- 97.4 0.0031 1E-07 56.7 13.8 103 267-378 14-130 (178)
26 3lou_A Formyltetrahydrofolate 97.3 0.0032 1.1E-07 61.2 13.5 49 34-82 9-59 (292)
27 2dt9_A Aspartokinase; protein- 97.2 0.0023 7.8E-08 56.9 10.4 106 266-377 14-129 (167)
28 2dtj_A Aspartokinase; protein- 97.1 0.0034 1.2E-07 56.4 11.1 111 33-160 13-130 (178)
29 2f1f_A Acetolactate synthase i 96.9 0.003 1E-07 56.1 8.5 63 128-198 3-67 (164)
30 3l76_A Aspartokinase; alloster 96.9 0.063 2.2E-06 57.3 20.0 184 127-380 269-479 (600)
31 2f1f_A Acetolactate synthase i 96.8 0.0029 9.8E-08 56.2 8.0 63 347-415 4-68 (164)
32 2pc6_A Probable acetolactate s 96.7 0.0047 1.6E-07 54.8 8.4 64 128-199 4-69 (165)
33 2dt9_A Aspartokinase; protein- 96.6 0.0042 1.4E-07 55.1 7.2 106 33-159 14-129 (167)
34 2jhe_A Transcription regulator 96.6 0.0084 2.9E-07 53.0 9.1 59 348-414 2-60 (190)
35 2pc6_A Probable acetolactate s 96.6 0.0073 2.5E-07 53.6 8.4 63 347-415 5-69 (165)
36 2fgc_A Acetolactate synthase, 96.4 0.25 8.5E-06 44.6 17.7 123 35-177 29-155 (193)
37 3s1t_A Aspartokinase; ACT doma 96.3 0.032 1.1E-06 50.2 11.1 110 34-160 15-131 (181)
38 2fgc_A Acetolactate synthase, 96.2 0.018 6.1E-07 52.2 9.0 64 128-199 29-94 (193)
39 3s1t_A Aspartokinase; ACT doma 96.0 0.071 2.4E-06 47.8 11.8 106 267-378 15-131 (181)
40 2jhe_A Transcription regulator 95.8 0.035 1.2E-06 48.9 9.2 59 130-198 2-60 (190)
41 4go7_X Aspartokinase; transfer 95.7 0.055 1.9E-06 49.5 10.0 107 266-378 33-150 (200)
42 1y7p_A Hypothetical protein AF 95.5 0.019 6.4E-07 52.9 6.0 49 127-175 3-56 (223)
43 3ab4_A Aspartokinase; aspartat 95.4 0.15 5.1E-06 51.9 13.0 103 266-377 262-378 (421)
44 3ab4_A Aspartokinase; aspartat 95.1 0.44 1.5E-05 48.4 15.6 109 34-159 263-378 (421)
45 3c1m_A Probable aspartokinase; 94.9 0.15 5.2E-06 52.7 11.5 112 267-392 317-451 (473)
46 1y7p_A Hypothetical protein AF 94.8 0.053 1.8E-06 49.9 6.9 48 35-82 4-56 (223)
47 4go7_X Aspartokinase; transfer 94.7 0.057 1.9E-06 49.4 6.9 121 21-160 22-150 (200)
48 3mwb_A Prephenate dehydratase; 94.2 0.25 8.6E-06 48.2 10.6 106 289-414 161-269 (313)
49 3c1m_A Probable aspartokinase; 94.1 0.2 6.8E-06 51.8 10.2 114 34-158 317-437 (473)
50 2qmw_A PDT, prephenate dehydra 93.9 0.35 1.2E-05 46.1 10.8 100 290-414 152-255 (267)
51 2qmx_A Prephenate dehydratase; 92.7 0.27 9.1E-06 47.3 7.8 55 346-401 200-255 (283)
52 3luy_A Probable chorismate mut 91.3 0.98 3.4E-05 44.3 10.2 46 355-401 217-263 (329)
53 1sc6_A PGDH, D-3-phosphoglycer 91.3 0.84 2.9E-05 46.1 10.0 50 127-176 330-379 (404)
54 1ygy_A PGDH, D-3-phosphoglycer 91.0 0.72 2.5E-05 48.3 9.5 63 344-410 452-516 (529)
55 3tvi_A Aspartokinase; structur 91.0 1 3.5E-05 46.1 10.4 103 267-378 297-409 (446)
56 1ygy_A PGDH, D-3-phosphoglycer 90.8 0.77 2.6E-05 48.1 9.5 53 124-176 450-504 (529)
57 1sc6_A PGDH, D-3-phosphoglycer 90.8 0.41 1.4E-05 48.4 7.1 47 346-392 331-377 (404)
58 3tvi_A Aspartokinase; structur 90.0 3.4 0.00012 42.2 13.2 120 35-176 298-423 (446)
59 2qmx_A Prephenate dehydratase; 88.1 1.8 6.1E-05 41.5 9.0 64 127-197 199-263 (283)
60 3mwb_A Prephenate dehydratase; 86.5 2.5 8.5E-05 41.1 9.1 55 126-182 199-255 (313)
61 3mah_A Aspartokinase; aspartat 86.1 2 6.8E-05 37.1 7.5 108 267-393 17-134 (157)
62 2qmw_A PDT, prephenate dehydra 86.1 2.7 9.3E-05 39.9 8.9 51 126-176 184-238 (267)
63 3k5p_A D-3-phosphoglycerate de 85.5 3.9 0.00013 41.4 10.3 50 126-175 341-390 (416)
64 3luy_A Probable chorismate mut 85.5 5.3 0.00018 39.0 10.9 53 128-182 206-261 (329)
65 3mah_A Aspartokinase; aspartat 83.6 4.3 0.00015 34.9 8.4 113 34-176 17-135 (157)
66 3mtj_A Homoserine dehydrogenas 83.2 0.98 3.4E-05 46.2 4.7 34 346-379 359-392 (444)
67 3mtj_A Homoserine dehydrogenas 82.7 2.9 9.9E-05 42.7 8.0 51 126-176 357-409 (444)
68 2cdq_A Aspartokinase; aspartat 80.9 2.8 9.6E-05 43.6 7.2 117 267-392 340-466 (510)
69 2cdq_A Aspartokinase; aspartat 80.5 22 0.00074 36.8 13.8 138 34-201 340-483 (510)
70 3k5p_A D-3-phosphoglycerate de 80.4 6.9 0.00023 39.5 9.7 49 266-314 341-389 (416)
71 1phz_A Protein (phenylalanine 76.5 3 0.0001 42.2 5.5 68 345-415 33-101 (429)
72 1phz_A Protein (phenylalanine 58.7 8.4 0.00029 38.9 4.5 52 125-176 31-83 (429)
73 1ib8_A Conserved protein SP14. 48.2 79 0.0027 27.3 8.6 93 281-381 14-111 (164)
74 1rwu_A Hypothetical UPF0250 pr 40.7 1.3E+02 0.0045 24.1 8.2 62 268-336 36-100 (109)
75 1tdj_A Biosynthetic threonine 38.4 1.4E+02 0.0047 30.8 10.0 134 36-176 339-483 (514)
76 3g12_A Putative lactoylglutath 35.7 1.1E+02 0.0037 24.3 7.2 49 34-89 66-115 (128)
77 2j0w_A Lysine-sensitive aspart 35.2 19 0.00065 36.6 2.8 118 267-393 307-432 (449)
78 1tdj_A Biosynthetic threonine 34.2 91 0.0031 32.1 7.8 113 269-388 339-474 (514)
79 3g12_A Putative lactoylglutath 27.8 1.3E+02 0.0045 23.7 6.4 49 267-322 66-115 (128)
80 1zhv_A Hypothetical protein AT 26.6 48 0.0016 27.8 3.4 50 354-416 73-122 (134)
81 1rwu_A Hypothetical UPF0250 pr 25.9 2.5E+02 0.0087 22.4 8.4 63 126-196 34-99 (109)
82 1f59_C NSP1P, FXFG nucleoporin 23.6 25 0.00086 20.3 0.7 12 441-452 4-15 (28)
83 1zhv_A Hypothetical protein AT 23.3 68 0.0023 26.8 3.7 45 127-176 61-108 (134)
84 2j0w_A Lysine-sensitive aspart 20.6 64 0.0022 32.6 3.6 106 34-159 307-418 (449)
85 2qrr_A Methionine import ATP-b 20.3 2.9E+02 0.01 21.1 6.9 59 281-377 39-97 (101)
86 2qsw_A Methionine import ATP-b 20.1 2.9E+02 0.01 21.1 6.8 56 357-417 37-92 (100)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.77 E-value=7.3e-18 Score=156.29 Aligned_cols=156 Identities=15% Similarity=0.106 Sum_probs=117.0
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCC---CC
Q 012797 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHI---TA 110 (456)
Q Consensus 34 ~~~~V~V~~~DrpGLl~~i~~vL~~~glnI~~A~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~l~~---~~ 110 (456)
..++|+|+|+|||||++.++++|+++|+||+++++++..|.+.-.|.|..+.. .....++.|++.|...... ..
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~~~---~~~~~~~~l~~~L~~~~~~~~~~~ 80 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLNAK---DGKLIQSALESALPGFQISTRRAS 80 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSS---SSHHHHHHHHHHSTTCEEEEEECC
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEecCc---cchhHHHHHHHHHHHHHHhcCCeE
Confidence 45799999999999999999999999999999999986666555788865421 2224678899998764311 00
Q ss_pred CcccCCcccccccCCCceEEEEEEeCCcccHHHHHHHHHHhCCceEEEEEEecCC--ceeEEEEEEEeCCCCCcCCChHH
Q 012797 111 GAKTWPSKQVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHN--RRIACVLYVNDDTTCRAVGDQTR 188 (456)
Q Consensus 111 ~~~~~~~~~v~~~~~~~~t~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~T~~--~~~~d~F~v~~~~~g~~l~d~~~ 188 (456)
..+. +. . ......++|+|.|+|||||+++|+++|+++|+||.+++..|.+ .+..++|++.. ..+.+ ++..
T Consensus 81 ~~~~--~~--~-~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~-~~~~~--~~~~ 152 (195)
T 2nyi_A 81 SVAE--RH--V-SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGS-RVAFP--FPLY 152 (195)
T ss_dssp CC--------C-CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEE-EEEEE--GGGH
T ss_pred EEEe--CC--c-CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEE-EEEcC--CCcc
Confidence 1111 10 1 3345689999999999999999999999999999999999976 66778888877 33333 2345
Q ss_pred HHHHHHHHHHHhc
Q 012797 189 LSLMEEQLKNILR 201 (456)
Q Consensus 189 ~~~l~~~L~~~L~ 201 (456)
+.|+++|.....
T Consensus 153 -~~l~~~l~~~a~ 164 (195)
T 2nyi_A 153 -QEVVTALSRVEE 164 (195)
T ss_dssp -HHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHH
Confidence 788888876543
No 2
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.77 E-value=3.5e-18 Score=158.44 Aligned_cols=144 Identities=15% Similarity=0.126 Sum_probs=113.4
Q ss_pred CeEEEEEEeeCchhHHHHHHHHHHhCCcEEEEEEEEecCCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhh-----
Q 012797 267 GYSVVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRR----- 341 (456)
Q Consensus 267 ~~~~v~V~~~Dr~gll~~i~~~L~~~~l~I~~a~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l~~----- 341 (456)
..++|+|+|+|||||+++|+++|+++|+||.++++++..|.+.-.|.|.... . ......+.|++.|.+.+..
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~~-~--~~~~~~~~l~~~L~~~~~~~~~~~ 80 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLNA-K--DGKLIQSALESALPGFQISTRRAS 80 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESS-S--SSHHHHHHHHHHSTTCEEEEEECC
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEecC-c--cchhHHHHHHHHHHHHHHhcCCeE
Confidence 4578999999999999999999999999999999998766544377775432 1 2234567777777644321
Q ss_pred --------cCCCceEEEEEeCCCcchHHHHHHHHHHCCceEEEEEEeecC--ceeeeEEEEEeCCCCCCChHHHHHHHHH
Q 012797 342 --------RVSEGLSLELCAKDRVGLLSEVTRILRENGLSVTRAGVSTVG--EQAVNVFYVRDASGNPVDMKTIEALRKE 411 (456)
Q Consensus 342 --------r~~~~~~lev~~~DrpGlL~~It~~l~~~gi~I~~a~i~T~g--~~~~d~F~v~d~~g~~l~~~~~~~L~~~ 411 (456)
.....++|+|.|+|||||+++||++|+++|+||..++..|.+ +++.++||++...+.+ .+.. ++|+++
T Consensus 81 ~~~~~~~~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~-~~~~-~~l~~~ 158 (195)
T 2nyi_A 81 SVAERHVSPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFP-FPLY-QEVVTA 158 (195)
T ss_dssp CC----CCTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEE-GGGH-HHHHHH
T ss_pred EEEeCCcCCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcC-CCcc-HHHHHH
Confidence 012358999999999999999999999999999999999998 7789999998766544 2345 788888
Q ss_pred HHHh
Q 012797 412 IGHT 415 (456)
Q Consensus 412 l~~~ 415 (456)
|.+.
T Consensus 159 l~~~ 162 (195)
T 2nyi_A 159 LSRV 162 (195)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 3
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.71 E-value=2.5e-16 Score=145.49 Aligned_cols=140 Identities=15% Similarity=0.174 Sum_probs=109.5
Q ss_pred eEEEEEEeeCchhHHHHHHHHHHhCCcEEEEEEEEecCCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhh------
Q 012797 268 YSVVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRR------ 341 (456)
Q Consensus 268 ~~~v~V~~~Dr~gll~~i~~~L~~~~l~I~~a~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l~~------ 341 (456)
.++|+|.|+||||++++++++|+++|+||.++++++..|.+.-.|.|..+ +...+.|++.|.+...+
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~-------~~~~~~l~~~L~~~~~~~~~~~~ 78 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGS-------PSNITRVETTLPLLGQQHDLITM 78 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEEC-------HHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecC-------CCCHHHHHHHHHHHHHhcCCEEE
Confidence 46899999999999999999999999999999999987766657777532 24667788877765421
Q ss_pred --cC--------CCceEEEEEeCCCcchHHHHHHHHHHCCceEEEEEEeecCc----eeeeEEEEEeCCCCCCChHHHHH
Q 012797 342 --RV--------SEGLSLELCAKDRVGLLSEVTRILRENGLSVTRAGVSTVGE----QAVNVFYVRDASGNPVDMKTIEA 407 (456)
Q Consensus 342 --r~--------~~~~~lev~~~DrpGlL~~It~~l~~~gi~I~~a~i~T~g~----~~~d~F~v~d~~g~~l~~~~~~~ 407 (456)
+. ...++|+|.++||||++++|+++|+++|+||..++..|.++ ++.+.|+++...+.+ .+...++
T Consensus 79 ~~~~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~-~~~~~~~ 157 (192)
T 1u8s_A 79 MKRTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVD-SGCNLMQ 157 (192)
T ss_dssp EEEECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEEC-TTSCHHH
T ss_pred EEeCCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCC-CCCCHHH
Confidence 11 13579999999999999999999999999999999999985 689999997765443 2234577
Q ss_pred HHHHHHHh
Q 012797 408 LRKEIGHT 415 (456)
Q Consensus 408 L~~~l~~~ 415 (456)
|+++|.+.
T Consensus 158 l~~~l~~~ 165 (192)
T 1u8s_A 158 LQEEFDAL 165 (192)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888754
No 4
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.68 E-value=2.6e-16 Score=145.38 Aligned_cols=156 Identities=15% Similarity=0.187 Sum_probs=110.2
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCC---CCCC
Q 012797 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKG---HITA 110 (456)
Q Consensus 34 ~~~~V~V~~~DrpGLl~~i~~vL~~~glnI~~A~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~l---~~~~ 110 (456)
...+|+|+|+||||++++++++|+++|+||.++++++..|.+...+.|..+. ...+.|++.|.... ....
T Consensus 5 ~~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~~-------~~~~~l~~~L~~~~~~~~~~~ 77 (192)
T 1u8s_A 5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSP-------SNITRVETTLPLLGQQHDLIT 77 (192)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEECH-------HHHHHHHHHHHHHHHHHTCEE
T ss_pred cEEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecCC-------CCHHHHHHHHHHHHHhcCCEE
Confidence 3578999999999999999999999999999999999777777688886431 24455555554311 1111
Q ss_pred CcccCCcccccccCCCceEEEEEEeCCcccHHHHHHHHHHhCCceEEEEEEecCCc----eeEEEEEEEeCCCCCcCCCh
Q 012797 111 GAKTWPSKQVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNR----RIACVLYVNDDTTCRAVGDQ 186 (456)
Q Consensus 111 ~~~~~~~~~v~~~~~~~~t~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~T~~~----~~~d~F~v~~~~~g~~l~d~ 186 (456)
..+...+. ........++|+|.|+||||++++|+++|+++|+||.+++..|.+. +..++|+++. ..+.+ ++
T Consensus 78 ~~~~~~~~--~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~-~~~~~--~~ 152 (192)
T 1u8s_A 78 MMKRTSPH--DHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAI-SARVD--SG 152 (192)
T ss_dssp EEEEECCC--CCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEE-EEEEC--TT
T ss_pred EEEeCCCC--CCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEE-EEeCC--CC
Confidence 01110000 0123446899999999999999999999999999999999999774 5778888876 23322 22
Q ss_pred HHHHHHHHHHHHHhc
Q 012797 187 TRLSLMEEQLKNILR 201 (456)
Q Consensus 187 ~~~~~l~~~L~~~L~ 201 (456)
...+.|+++|.....
T Consensus 153 ~~~~~l~~~l~~~~~ 167 (192)
T 1u8s_A 153 CNLMQLQEEFDALCT 167 (192)
T ss_dssp SCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 346788888876543
No 5
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.91 E-value=2.3e-08 Score=102.44 Aligned_cols=122 Identities=8% Similarity=-0.007 Sum_probs=89.4
Q ss_pred CeEEEEEEeeCchhHHHHHHHHHHhCCcEEEEEEEEecCCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHH---Hh---
Q 012797 267 GYSVVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAA---IR--- 340 (456)
Q Consensus 267 ~~~~v~V~~~Dr~gll~~i~~~L~~~~l~I~~a~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~---l~--- 340 (456)
..++|+|.|+||||+++.++++|+++|+||.+++....+|++.-...+..+.+. ...+.|++.|... +.
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~~~~-----~~~~~l~~~l~~~~~~~~~~~ 85 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADV-----ADGPALRHDVEAAIRKVGLDV 85 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEECHHH-----HTSHHHHHHHHHHHHHTTCEE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEecCCc-----CCHHHHHHHHHHHHHHcCeEE
Confidence 456899999999999999999999999999999999888876544444321110 0125666666543 21
Q ss_pred --h------c--CCCceEEEEEeCC-CcchHHHHHHHHHHCCceEEEEEEeecCceeeeEEEEE
Q 012797 341 --R------R--VSEGLSLELCAKD-RVGLLSEVTRILRENGLSVTRAGVSTVGEQAVNVFYVR 393 (456)
Q Consensus 341 --~------r--~~~~~~lev~~~D-rpGlL~~It~~l~~~gi~I~~a~i~T~g~~~~d~F~v~ 393 (456)
+ | ....+.+++.+.| +||++.+|+.+|+++|+||.....-+......=-|++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v~ 149 (415)
T 3p96_A 86 SIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRVS 149 (415)
T ss_dssp EEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEEEEEE
T ss_pred EEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEEEEee
Confidence 0 1 1246899999999 99999999999999999999988777322222236664
No 6
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.89 E-value=3.1e-08 Score=101.54 Aligned_cols=153 Identities=13% Similarity=0.095 Sum_probs=101.8
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCC---CCCCCC
Q 012797 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGP---KGHITA 110 (456)
Q Consensus 34 ~~~~V~V~~~DrpGLl~~i~~vL~~~glnI~~A~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~---~l~~~~ 110 (456)
...+|+|.|+||||+++.++++|+++|+||.+++.++.+|++.....+.-+.+. .+ .+.|++.|.. .+....
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~~~~-~~----~~~l~~~l~~~~~~~~~~~ 85 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADV-AD----GPALRHDVEAAIRKVGLDV 85 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEECHHH-HT----SHHHHHHHHHHHHHTTCEE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEecCCc-CC----HHHHHHHHHHHHHHcCeEE
Confidence 467899999999999999999999999999999999988888766666533211 01 1344444432 122111
Q ss_pred CcccCCcccccccCCCceEEEEEEeCC-cccHHHHHHHHHHhCCceEEEEEEecCCceeEEEEEEEeCCCCCcCCChHHH
Q 012797 111 GAKTWPSKQVGVHSVGDHTAIELIGRD-RPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQTRL 189 (456)
Q Consensus 111 ~~~~~~~~~v~~~~~~~~t~i~v~~~D-rpGLL~~I~~~l~~~gi~I~~a~i~T~~~~~~d~F~v~~~~~g~~l~d~~~~ 189 (456)
.+...... .......+..+++.+.| +||++.+|+.+++++|+||...+..+......--|.+..+ + .+ .
T Consensus 86 ~~~~~~~~--~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v~~~----~-~~---~ 155 (415)
T 3p96_A 86 SIERSDDV--PIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRVSVP----P-GA---D 155 (415)
T ss_dssp EEEECSSS--CSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEEEEEECC----T-TC---H
T ss_pred EEEECCcc--cccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEEEEeeCC----C-CC---H
Confidence 11110000 00133468899999999 9999999999999999999998887743333333666553 1 12 3
Q ss_pred HHHHHHHHHHhc
Q 012797 190 SLMEEQLKNILR 201 (456)
Q Consensus 190 ~~l~~~L~~~L~ 201 (456)
+.++.++.+.+.
T Consensus 156 ~~l~~~l~~l~~ 167 (415)
T 3p96_A 156 EALRTALNRVSS 167 (415)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 556666665443
No 7
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.56 E-value=1.3e-06 Score=76.17 Aligned_cols=110 Identities=11% Similarity=0.101 Sum_probs=74.4
Q ss_pred EEEEEEeeCchhHHHHHHHHHHhCCcEEEEEEEEecCCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhhcCCCceE
Q 012797 269 SVVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRRRVSEGLS 348 (456)
Q Consensus 269 ~~v~V~~~Dr~gll~~i~~~L~~~~l~I~~a~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l~~r~~~~~~ 348 (456)
.+++|..+|+||.++++++.|++.|+||....+....+...-.|.+ .+. ++.++.|++. .-......+
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~--------~d~---~~a~~~L~~~-G~~v~~~sv 74 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIV--------SDP---DKAYKALKDN-HFAVNITDV 74 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEE--------SCH---HHHHHHHHHT-TCCEEEEEE
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEEe--------CCH---HHHHHHHHHc-CCeEeeeeE
Confidence 4688899999999999999999999999988776443322222432 122 3333444431 001111246
Q ss_pred EEEEeCCCcchHHHHHHHHHHCCceEEEEEEeecCceeeeEE
Q 012797 349 LELCAKDRVGLLSEVTRILRENGLSVTRAGVSTVGEQAVNVF 390 (456)
Q Consensus 349 lev~~~DrpGlL~~It~~l~~~gi~I~~a~i~T~g~~~~d~F 390 (456)
+-+..+|+||.+++|+++|++.|+||.+......+.+..-.|
T Consensus 75 v~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i 116 (144)
T 2f06_A 75 VGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVI 116 (144)
T ss_dssp EEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEE
T ss_pred EEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEE
Confidence 777888999999999999999999998877653334444344
No 8
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.48 E-value=2.8e-06 Score=74.00 Aligned_cols=113 Identities=19% Similarity=0.180 Sum_probs=75.7
Q ss_pred eEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCCCCccc
Q 012797 35 CTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHITAGAKT 114 (456)
Q Consensus 35 ~~~V~V~~~DrpGLl~~i~~vL~~~glnI~~A~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~l~~~~~~~~ 114 (456)
..+|+|..+|+||.++++++.|++.|+||..-.+....+..+-.|.+.+ . +..++.|+.. . +.
T Consensus 6 ~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~~d--------~---~~a~~~L~~~-G----~~- 68 (144)
T 2f06_A 6 AKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIVSD--------P---DKAYKALKDN-H----FA- 68 (144)
T ss_dssp EEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEESC--------H---HHHHHHHHHT-T----CC-
T ss_pred EEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEEeCC--------H---HHHHHHHHHc-C----Ce-
Confidence 3578999999999999999999999999998777632221222244321 1 2223333321 0 00
Q ss_pred CCcccccccCCCceEEEEEEeCCcccHHHHHHHHHHhCCceEEEEEEecCCceeEEEEEE
Q 012797 115 WPSKQVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYV 174 (456)
Q Consensus 115 ~~~~~v~~~~~~~~t~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~T~~~~~~d~F~v 174 (456)
. ....++.+..+|+||.+++++++|+++|+||.....+..+.+..-+|.+
T Consensus 69 ---v-------~~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~~ 118 (144)
T 2f06_A 69 ---V-------NITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIRP 118 (144)
T ss_dssp ---E-------EEEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEE
T ss_pred ---E-------eeeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEEe
Confidence 0 1135677788999999999999999999999887765334445444444
No 9
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.22 E-value=6.2e-06 Score=65.73 Aligned_cols=66 Identities=15% Similarity=0.348 Sum_probs=52.9
Q ss_pred ceEEEEEEeCCcccHHHHHHHHHHhCCceEEEEEEecCCceeEEEEEEEeCCCCCcCCChHHHHHHHHHHHHH
Q 012797 127 DHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNI 199 (456)
Q Consensus 127 ~~t~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~T~~~~~~d~F~v~~~~~g~~l~d~~~~~~l~~~L~~~ 199 (456)
..+.|+|.++||||+|++|+++|+++|+||.+....+..+.+.-.+.+..+ + . ..++.|.++|.+.
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~--~-~----~~l~~l~~~L~~~ 69 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD--E-K----QDFTYLRNEFEAF 69 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--S-C----CCHHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC--C-C----CCHHHHHHHHHHH
Confidence 467899999999999999999999999999999998876777777777553 2 1 2357777777653
No 10
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.05 E-value=3e-05 Score=61.61 Aligned_cols=51 Identities=20% Similarity=0.215 Sum_probs=44.6
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEEeCCEEEEEEEEEeC
Q 012797 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQ 84 (456)
Q Consensus 34 ~~~~V~V~~~DrpGLl~~i~~vL~~~glnI~~A~i~t~~g~~~d~f~V~~~ 84 (456)
....|+|.|+||||++++++++|+++|+||.+....+.++.+.-.+.+.-+
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~ 54 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD 54 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC
Confidence 357899999999999999999999999999999999877887777777533
No 11
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=97.92 E-value=0.0041 Score=66.53 Aligned_cols=270 Identities=12% Similarity=0.156 Sum_probs=156.3
Q ss_pred EEEEEE-ecCCcchHHHHHHHHhhCCceEEEEEEEE-eCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCCCCcc
Q 012797 36 TVVKVD-SVNKPGILLEVVQVLSDLDLIITKAYISS-DGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHITAGAK 113 (456)
Q Consensus 36 ~~V~V~-~~DrpGLl~~i~~vL~~~glnI~~A~i~t-~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~l~~~~~~~ 113 (456)
+.|+|. .++.||.++++.+.|+++|++|.--..+. .+|..--.|.|...+ . +...+.|+ .+...+......
T Consensus 271 ~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~~~Isftv~~~~-~----~~a~~~l~-~~~~el~~~~~~- 343 (600)
T 3l76_A 271 AKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKDL-L----NTAEAVTS-AIAPALRSYPEA- 343 (600)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTEEEEEEEECGGG-H----HHHHHHHH-HHGGGGSSSTTC-
T ss_pred EEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCCceEEEEEeHHH-H----HHHHHHHH-HHHHHhhccccc-
Confidence 344544 47899999999999999999995332222 455554457775321 0 11222222 232222100000
Q ss_pred cCCcccccccCCCceEEEEEEeC---CcccHHHHHHHHHHhCCceEEEEEEecCCceeEEEEEEEeCCCCCcCCChHHHH
Q 012797 114 TWPSKQVGVHSVGDHTAIELIGR---DRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQTRLS 190 (456)
Q Consensus 114 ~~~~~~v~~~~~~~~t~i~v~~~---DrpGLL~~I~~~l~~~gi~I~~a~i~T~~~~~~d~F~v~~~~~g~~l~d~~~~~ 190 (456)
.....+ .-..+...|.|.|. .+||+.+++..+|++.|+||.... |. .....|.|... ..+
T Consensus 344 -~~~~~v--~~~~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS--e~~Is~vI~~~----------d~~ 406 (600)
T 3l76_A 344 -DQEAEI--IVEKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS--EVKVSCVIDQR----------DAD 406 (600)
T ss_dssp -SSSSEE--EEECSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC--SSEEEEEEEGG----------GHH
T ss_pred -cCccee--EecCCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC--CCEEEEEEcHH----------HHH
Confidence 000111 22346888999986 789999999999999999997766 22 33444555542 234
Q ss_pred HHHHHHHHHhcCCCCcccccccceeecccccCchhHHHHhhhcCccccCCCCCcCccCCCCCCCCCEEEEEecCCCCeEE
Q 012797 191 LMEEQLKNILRGCDDEDSEKVARTSFSMGFTHVDRRLHQMFFADRDYEGGGVTTADQVDHTPSFKPEITVERLEDKGYSV 270 (456)
Q Consensus 191 ~l~~~L~~~L~~~~~~~~~~~~~~~~~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~n~~~~~~~~ 270 (456)
+.-++|++.+..... . .. . .+...+ . ..-.-|..+ .+...
T Consensus 407 ~Av~aLh~~f~~~~t----~------------~~---~----~~~~~~------------~-~~v~Gia~~----~~~a~ 446 (600)
T 3l76_A 407 RAIAALSNAFGVTLS----P------------PK---N----QTDTSH------------L-PAVRGVALD----QDQAQ 446 (600)
T ss_dssp HHHHHHHHHTTCCBC----C------------CC---C----CCC---------------C-CSCCEEEEE----CSEEE
T ss_pred HHHHHHHHhhcccCC----C------------cc---c----cccccc------------c-CceEEEEee----CCEEE
Confidence 444566666543210 0 00 0 000000 0 001133332 25566
Q ss_pred EEEE-eeCchhHHHHHHHHHHhCCcEEEEEEEEec----CC--ceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhh--
Q 012797 271 VNVK-CRDRAKLMFDIVCTLTDMQYVVFHAAISSD----GP--HASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRR-- 341 (456)
Q Consensus 271 v~V~-~~Dr~gll~~i~~~L~~~~l~I~~a~i~t~----~g--~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l~~-- 341 (456)
|++. .+|+||+.+++.+.|++.|+||---..... +| ..--.|.|.. ...++..+.|++....
T Consensus 447 i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~---------~d~~~a~~~l~~~~~~~~ 517 (600)
T 3l76_A 447 IAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE---------GDSSQAEAILQPLIKDWL 517 (600)
T ss_dssp EEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH---------HHHHHHHHHHHHHTTTST
T ss_pred EEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH---------HHHHHHHHHHHHHHHhcC
Confidence 7765 599999999999999999999953333322 24 2233466643 3344444445442110
Q ss_pred --c---CCCceEEEEEe---CCCcchHHHHHHHHHHCCceEEEEE
Q 012797 342 --R---VSEGLSLELCA---KDRVGLLSEVTRILRENGLSVTRAG 378 (456)
Q Consensus 342 --r---~~~~~~lev~~---~DrpGlL~~It~~l~~~gi~I~~a~ 378 (456)
. .+....|.|.| ..+||+.+++.++|++.||||....
T Consensus 518 ~~~v~~~~~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis 562 (600)
T 3l76_A 518 DAAIVVNKAIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA 562 (600)
T ss_dssp TCEEEEECCEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE
T ss_pred CceEEEeCCeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE
Confidence 0 12456788887 4999999999999999999998866
No 12
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.91 E-value=5.1e-05 Score=59.62 Aligned_cols=63 Identities=17% Similarity=0.401 Sum_probs=48.4
Q ss_pred ceEEEEEEeCCcccHHHHHHHHHHhCCceEEEEEEecCCceeEEEEEEEeCCCCCcCCChHHHHHHHHHH
Q 012797 127 DHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQL 196 (456)
Q Consensus 127 ~~t~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~T~~~~~~d~F~v~~~~~g~~l~d~~~~~~l~~~L 196 (456)
-.+.|.|.+.||||+|++|+++|++.|+||.+..+.+.++.+...|.+..+ +...++++.++|
T Consensus 4 ~~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~-------~~~~l~~l~~~L 66 (88)
T 2ko1_A 4 FLAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVK-------NTDKLTTLMDKL 66 (88)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEES-------SHHHHHHHHHHH
T ss_pred EEEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEEC-------CHHHHHHHHHHH
Confidence 367889999999999999999999999999999998866555566666552 234455555444
No 13
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.80 E-value=8.8e-05 Score=58.25 Aligned_cols=64 Identities=6% Similarity=0.148 Sum_probs=48.7
Q ss_pred ceEEEEEeCCCcchHHHHHHHHHHCCceEEEEEEeecCceeeeEEEEEeCCCCCCChHHHHHHHHHHHH
Q 012797 346 GLSLELCAKDRVGLLSEVTRILRENGLSVTRAGVSTVGEQAVNVFYVRDASGNPVDMKTIEALRKEIGH 414 (456)
Q Consensus 346 ~~~lev~~~DrpGlL~~It~~l~~~gi~I~~a~i~T~g~~~~d~F~v~d~~g~~l~~~~~~~L~~~l~~ 414 (456)
.+.|.|.+.||||+|++|+++|+++|+||.++.+.+.++.+...|.+.-. +...++++.++|.+
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~-----~~~~l~~l~~~L~~ 68 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVK-----NTDKLTTLMDKLRK 68 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEES-----SHHHHHHHHHHHTT
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEEC-----CHHHHHHHHHHHhc
Confidence 35689999999999999999999999999999998876654555544322 23456667666654
No 14
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.75 E-value=0.00034 Score=62.34 Aligned_cols=102 Identities=15% Similarity=0.244 Sum_probs=72.3
Q ss_pred CeEEEEEEe-eCchhHHHHHHHHHHhCCcEEEEEEEEec-CCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHH---Hhh
Q 012797 267 GYSVVNVKC-RDRAKLMFDIVCTLTDMQYVVFHAAISSD-GPHASQEYYIRHMDGCILDTEGEKERVIKCLEAA---IRR 341 (456)
Q Consensus 267 ~~~~v~V~~-~Dr~gll~~i~~~L~~~~l~I~~a~i~t~-~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~---l~~ 341 (456)
+...|+|.+ +|+||.++++...|+++|+||........ +|...-.|.|.. ...++..+.|++. +..
T Consensus 24 ~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~---------~~~~~a~~~l~~~~~~l~~ 94 (167)
T 2re1_A 24 NQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPR---------GDYKQTLEILSERQDSIGA 94 (167)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECG---------GGHHHHHHHHHHSSTTTTC
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEec---------hHHHHHHHHHHHHHHHcCC
Confidence 567888885 99999999999999999999987765432 444444577732 1123333444432 111
Q ss_pred c----CCCceEEEEEeCC---CcchHHHHHHHHHHCCceEEEE
Q 012797 342 R----VSEGLSLELCAKD---RVGLLSEVTRILRENGLSVTRA 377 (456)
Q Consensus 342 r----~~~~~~lev~~~D---rpGlL~~It~~l~~~gi~I~~a 377 (456)
. ......+.|.|.+ +||+++++.++|.+.|+||...
T Consensus 95 ~~i~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~i 137 (167)
T 2re1_A 95 ASIDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMI 137 (167)
T ss_dssp SEEEEESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEE
T ss_pred ceEEecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEE
Confidence 0 1245789999987 9999999999999999999994
No 15
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.68 E-value=0.00054 Score=66.53 Aligned_cols=115 Identities=13% Similarity=0.113 Sum_probs=70.1
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEE--eCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCC---CCCC
Q 012797 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISS--DGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGP---KGHI 108 (456)
Q Consensus 34 ~~~~V~V~~~DrpGLl~~i~~vL~~~glnI~~A~i~t--~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~---~l~~ 108 (456)
....|+|.|+||||+++.++++|+++|+||.+.+.++ ..|++.....+.-+.+. .+ .+.|+++|.. .+..
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~-~~----~~~L~~~f~~la~~~~m 79 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKV-IP----LASLRTGFGVIAAKFTM 79 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCC-CC----HHHHHHHHHHHHHHTTC
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCC-CC----HHHHHHHHHHHHHHcCC
Confidence 3478999999999999999999999999999999986 46777766666533321 22 2445544432 1111
Q ss_pred CCCcccCCcccccccCCCceEEEEEEeCCcccHHHHHHHHHHhCCceEEEEEEec
Q 012797 109 TAGAKTWPSKQVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWT 163 (456)
Q Consensus 109 ~~~~~~~~~~~v~~~~~~~~t~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~T 163 (456)
.+..........|-|.+.-+-.-|.+|......-.++++-+-+.+
T Consensus 80 ----------~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Vis 124 (288)
T 3obi_A 80 ----------GWHMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVS 124 (288)
T ss_dssp ----------EEEEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEE
T ss_pred ----------EEEeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEc
Confidence 111111122334444444445566677666666555544343433
No 16
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.65 E-value=0.0014 Score=63.65 Aligned_cols=104 Identities=13% Similarity=0.117 Sum_probs=68.5
Q ss_pred eEEEEEEeeCchhHHHHHHHHHHhCCcEEEEEEEEec--CCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHH---Hh--
Q 012797 268 YSVVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSD--GPHASQEYYIRHMDGCILDTEGEKERVIKCLEAA---IR-- 340 (456)
Q Consensus 268 ~~~v~V~~~Dr~gll~~i~~~L~~~~l~I~~a~i~t~--~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~---l~-- 340 (456)
.++++|.|+||||++++++++|+++|+||.+++.++. .|++.-...+.-+.+. . ..+.|++.|++. +.
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~-~----~~~~L~~~f~~la~~~~m~ 80 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKV-I----PLASLRTGFGVIAAKFTMG 80 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCC-C----CHHHHHHHHHHHHHHTTCE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCC-C----CHHHHHHHHHHHHHHcCCE
Confidence 4679999999999999999999999999999999854 5666544444333221 1 245566666533 21
Q ss_pred ---hcCCCceEEEEEeCCCcchHHHHHHHHHHCCceEEE
Q 012797 341 ---RRVSEGLSLELCAKDRVGLLSEVTRILRENGLSVTR 376 (456)
Q Consensus 341 ---~r~~~~~~lev~~~DrpGlL~~It~~l~~~gi~I~~ 376 (456)
+...+...|-|-.-.+---|.+|-.....-.++++-
T Consensus 81 ~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i 119 (288)
T 3obi_A 81 WHMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIP 119 (288)
T ss_dssp EEEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEE
T ss_pred EEeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEE
Confidence 112233344444445555888888888776665443
No 17
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.61 E-value=0.0004 Score=67.83 Aligned_cols=50 Identities=24% Similarity=0.358 Sum_probs=43.4
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEEe--CCEEEEEEEEEe
Q 012797 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISSD--GGWFMDVFHVID 83 (456)
Q Consensus 34 ~~~~V~V~~~DrpGLl~~i~~vL~~~glnI~~A~i~t~--~g~~~d~f~V~~ 83 (456)
....++|.|+||||+++.+++.|+++|+||.+++.+++ .|+++....+..
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~ 72 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRA 72 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEG
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEec
Confidence 45789999999999999999999999999999999985 688776665543
No 18
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.54 E-value=0.0014 Score=64.08 Aligned_cols=98 Identities=12% Similarity=0.087 Sum_probs=63.2
Q ss_pred EEEEEEeeCchhHHHHHHHHHHhCCcEEEEEEEEec--CCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHH---Hh---
Q 012797 269 SVVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSD--GPHASQEYYIRHMDGCILDTEGEKERVIKCLEAA---IR--- 340 (456)
Q Consensus 269 ~~v~V~~~Dr~gll~~i~~~L~~~~l~I~~a~i~t~--~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~---l~--- 340 (456)
++++|.|+||||++++|+++|+++|+||.+++.++. .|++.-...+..+.+. . ..+.|++.|++. +.
T Consensus 23 ~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~~-~----~~~~L~~~l~~la~~l~m~~ 97 (302)
T 3o1l_A 23 FRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTLP-F----DLDGFREAFTPIAEEFSMDW 97 (302)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGSS-S----CHHHHHHHHHHHHHHHTCEE
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCCC-C----CHHHHHHHHHHHHHHhCCee
Confidence 568999999999999999999999999999999975 5666544444332221 1 245566655432 21
Q ss_pred --hcC--CCceEEEEEeCCCcchHHHHHHHHHHCCce
Q 012797 341 --RRV--SEGLSLELCAKDRVGLLSEVTRILRENGLS 373 (456)
Q Consensus 341 --~r~--~~~~~lev~~~DrpGlL~~It~~l~~~gi~ 373 (456)
+.. +....|=+++. ---|.+|......-.++
T Consensus 98 ~l~~~~~~~ri~vl~Sg~--g~nl~~ll~~~~~g~l~ 132 (302)
T 3o1l_A 98 RITDSAQKKRVVLMASRE--SHCLADLLHRWHSDELD 132 (302)
T ss_dssp EEEETTSCCEEEEEECSC--CHHHHHHHHHHHTTCSC
T ss_pred eecccCCCcEEEEEEeCC--chhHHHHHHHHHCCCCC
Confidence 111 22334444444 34677777777665443
No 19
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.53 E-value=0.00096 Score=64.71 Aligned_cols=49 Identities=14% Similarity=0.114 Sum_probs=42.2
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEE--eCCEEEEEEEEE
Q 012797 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISS--DGGWFMDVFHVI 82 (456)
Q Consensus 34 ~~~~V~V~~~DrpGLl~~i~~vL~~~glnI~~A~i~t--~~g~~~d~f~V~ 82 (456)
....|+|.|+||||+++.+++.|+++|+||.+.+.++ ..|++.-...+.
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~ 57 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFR 57 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEE
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEe
Confidence 3478999999999999999999999999999999997 457776555554
No 20
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.51 E-value=0.00058 Score=60.79 Aligned_cols=110 Identities=14% Similarity=0.179 Sum_probs=75.0
Q ss_pred CeEEEEEE-ecCCcchHHHHHHHHhhCCceEEEEEEEE-eCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCCCC
Q 012797 34 ECTVVKVD-SVNKPGILLEVVQVLSDLDLIITKAYISS-DGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHITAG 111 (456)
Q Consensus 34 ~~~~V~V~-~~DrpGLl~~i~~vL~~~glnI~~A~i~t-~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~l~~~~~ 111 (456)
+...|+|. .+|+||.++++.++|+++|+||.--.... .+|..--.|.|...+. +...+.|++ +...+..
T Consensus 24 ~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~~~-----~~a~~~l~~-~~~~l~~--- 94 (167)
T 2re1_A 24 NQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDY-----KQTLEILSE-RQDSIGA--- 94 (167)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGGGH-----HHHHHHHHH-SSTTTTC---
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEechHH-----HHHHHHHHH-HHHHcCC---
Confidence 56888998 49999999999999999999998665542 3454444577753111 122333333 3222211
Q ss_pred cccCCcccccccCCCceEEEEEEeCC---cccHHHHHHHHHHhCCceEEEEE
Q 012797 112 AKTWPSKQVGVHSVGDHTAIELIGRD---RPGLLSEISAVLANLRFNVAAAE 160 (456)
Q Consensus 112 ~~~~~~~~v~~~~~~~~t~i~v~~~D---rpGLL~~I~~~l~~~gi~I~~a~ 160 (456)
..+ ....+...++|.|.+ +||+++++..+|+++|+||....
T Consensus 95 ------~~i--~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~is 138 (167)
T 2re1_A 95 ------ASI--DGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMIS 138 (167)
T ss_dssp ------SEE--EEESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEE
T ss_pred ------ceE--EecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEE
Confidence 011 123468899999987 99999999999999999999854
No 21
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.48 E-value=0.00093 Score=64.84 Aligned_cols=49 Identities=24% Similarity=0.217 Sum_probs=42.3
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEE--eCCEEEEEEEEE
Q 012797 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISS--DGGWFMDVFHVI 82 (456)
Q Consensus 34 ~~~~V~V~~~DrpGLl~~i~~vL~~~glnI~~A~i~t--~~g~~~d~f~V~ 82 (456)
....|+|.|+||||+++.+++.|+++|+||.+++.++ ..|+++....+.
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~ 56 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVE 56 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEE
Confidence 4578999999999999999999999999999999986 467777555554
No 22
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.47 E-value=0.0021 Score=62.23 Aligned_cols=101 Identities=10% Similarity=-0.004 Sum_probs=64.2
Q ss_pred eEEEEEEeeCchhHHHHHHHHHHhCCcEEEEEEEEec--CCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhh----
Q 012797 268 YSVVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSD--GPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRR---- 341 (456)
Q Consensus 268 ~~~v~V~~~Dr~gll~~i~~~L~~~~l~I~~a~i~t~--~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l~~---- 341 (456)
.++++|.|+||||++++++++|+++|+||.+++.++. .|++.-...+..+.+ ...+.|++.|.+.-.+
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~------~~~~~L~~~f~~la~~l~m~ 81 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPDD------FDEAGFRAGLAERSEAFGMA 81 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCSS------CCHHHHHHHHHHHHGGGTCE
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCCC------CCHHHHHHHHHHHHHHcCCE
Confidence 4679999999999999999999999999999999964 566553444432221 1256666666543211
Q ss_pred ----cCCCceEEEEEeCCCcchHHHHHHHHHHCCceE
Q 012797 342 ----RVSEGLSLELCAKDRVGLLSEVTRILRENGLSV 374 (456)
Q Consensus 342 ----r~~~~~~lev~~~DrpGlL~~It~~l~~~gi~I 374 (456)
...+...|-|-+-.+---|.+|-.....-.++.
T Consensus 82 ~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~ 118 (286)
T 3n0v_A 82 FELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGM 118 (286)
T ss_dssp EEEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCC
T ss_pred EEeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCc
Confidence 112222333333333457777777776654443
No 23
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.40 E-value=0.0034 Score=60.86 Aligned_cols=102 Identities=9% Similarity=0.074 Sum_probs=64.6
Q ss_pred CeEEEEEEeeCchhHHHHHHHHHHhCCcEEEEEEEEec--CCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhh---
Q 012797 267 GYSVVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSD--GPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRR--- 341 (456)
Q Consensus 267 ~~~~v~V~~~Dr~gll~~i~~~L~~~~l~I~~a~i~t~--~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l~~--- 341 (456)
..++++|.|+||||++++|+++|+++|+||.+++.++. .|++.-...+.. .+. ..+.|++.|++.-.+
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~-~~~------~~~~L~~~f~~la~~~~m 78 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEI-PVA------GVNDFNSAFGKVVEKYNA 78 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEEC-CC---------CHHHHHHHHHHGGGTC
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEc-CCC------CHHHHHHHHHHHHHHcCC
Confidence 45689999999999999999999999999999999854 566653333322 111 123566666543211
Q ss_pred -----cCCCceEEEEEeCCCcchHHHHHHHHHHCCceEE
Q 012797 342 -----RVSEGLSLELCAKDRVGLLSEVTRILRENGLSVT 375 (456)
Q Consensus 342 -----r~~~~~~lev~~~DrpGlL~~It~~l~~~gi~I~ 375 (456)
...+...|-|-+-.+---|.+|-.....-.++++
T Consensus 79 ~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~ 117 (287)
T 3nrb_A 79 EWWFRPRTDRKKVVIMVSKFDHCLGDLLYRHRLGELDME 117 (287)
T ss_dssp EEEEEETTCCCEEEEEECSCCHHHHHHHHHHHHTSSCCE
T ss_pred eeEeeccCCCcEEEEEEeCCCcCHHHHHHHHHCCCCCeE
Confidence 1122333434344444578888888877655443
No 24
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.38 E-value=0.0033 Score=61.09 Aligned_cols=101 Identities=14% Similarity=0.138 Sum_probs=63.5
Q ss_pred eEEEEEEeeCchhHHHHHHHHHHhCCcEEEEEEEEec--CCceEEEEEEEcc-CCCCCCCHHHHHHHHHHHHHH---Hh-
Q 012797 268 YSVVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSD--GPHASQEYYIRHM-DGCILDTEGEKERVIKCLEAA---IR- 340 (456)
Q Consensus 268 ~~~v~V~~~Dr~gll~~i~~~L~~~~l~I~~a~i~t~--~g~~~d~f~V~~~-~g~~~~~~~~~~~l~~~L~~~---l~- 340 (456)
.++++|.|+||||++++|+++|+++|+||.+++.++. .|++.-...+... .+... ..+.|++.|++. +.
T Consensus 10 ~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~----~~~~L~~~f~~la~~~~m 85 (292)
T 3lou_A 10 QFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADAL----RVDALRREFEPIAERFRM 85 (292)
T ss_dssp EEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----C----CHHHHHHHHHHHHHHHTC
T ss_pred cEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCC----CHHHHHHHHHHHHHhcCc
Confidence 4679999999999999999999999999999999963 5665533333222 01011 245566666432 21
Q ss_pred ----hcC--CCceEEEEEeCCCcchHHHHHHHHHHCCceE
Q 012797 341 ----RRV--SEGLSLELCAKDRVGLLSEVTRILRENGLSV 374 (456)
Q Consensus 341 ----~r~--~~~~~lev~~~DrpGlL~~It~~l~~~gi~I 374 (456)
+.. +....|=+++.+ --|.+|-.....-.+++
T Consensus 86 ~~~l~~~~~~~ri~vl~Sg~g--~~l~~ll~~~~~g~l~~ 123 (292)
T 3lou_A 86 QWAIHDVAARPKVLIMVSKLE--HCLADLLFRWKMGELKM 123 (292)
T ss_dssp EEEEEETTSCCEEEEEECSCC--HHHHHHHHHHHHTSSCC
T ss_pred EEEeeccCCCCEEEEEEcCCC--cCHHHHHHHHHcCCCCc
Confidence 111 223444444443 47788887777655543
No 25
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.37 E-value=0.0031 Score=56.71 Aligned_cols=103 Identities=12% Similarity=0.121 Sum_probs=71.4
Q ss_pred CeEEEEEE-eeCchhHHHHHHHHHHhCCcEEEEEEEEec---CCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhh-
Q 012797 267 GYSVVNVK-CRDRAKLMFDIVCTLTDMQYVVFHAAISSD---GPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRR- 341 (456)
Q Consensus 267 ~~~~v~V~-~~Dr~gll~~i~~~L~~~~l~I~~a~i~t~---~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l~~- 341 (456)
+.+.|+|. .+|+||.++++...|++.|+||......+. ++..--.|.+.. ...++..+.|++....
T Consensus 14 ~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~---------~d~~~a~~~l~~~~~~~ 84 (178)
T 2dtj_A 14 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPR---------SDGRRAMEILKKLQVQG 84 (178)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEH---------HHHHHHHHHHHTTTTTT
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEcc---------ccHHHHHHHHHHHHHhc
Confidence 56778884 699999999999999999999987665543 222222366642 2223334444432111
Q ss_pred --c----CCCceEEEEEeC---CCcchHHHHHHHHHHCCceEEEEE
Q 012797 342 --R----VSEGLSLELCAK---DRVGLLSEVTRILRENGLSVTRAG 378 (456)
Q Consensus 342 --r----~~~~~~lev~~~---DrpGlL~~It~~l~~~gi~I~~a~ 378 (456)
. ..+...|.|.|. ++||+++++.++|++.||||....
T Consensus 85 ~~~~v~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~is 130 (178)
T 2dtj_A 85 NWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS 130 (178)
T ss_dssp TCSEEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred CCCeEEEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEE
Confidence 1 124567788887 899999999999999999999843
No 26
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.27 E-value=0.0032 Score=61.20 Aligned_cols=49 Identities=12% Similarity=0.079 Sum_probs=42.1
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEE--eCCEEEEEEEEE
Q 012797 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISS--DGGWFMDVFHVI 82 (456)
Q Consensus 34 ~~~~V~V~~~DrpGLl~~i~~vL~~~glnI~~A~i~t--~~g~~~d~f~V~ 82 (456)
....++|.|+||||+++++++.|+++|+||.+++.++ ..|+++-...+.
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~ 59 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFH 59 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEE
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEE
Confidence 4578999999999999999999999999999999997 467776555554
No 27
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.16 E-value=0.0023 Score=56.87 Aligned_cols=106 Identities=7% Similarity=0.041 Sum_probs=70.8
Q ss_pred CCeEEEEEEe-eCchhHHHHHHHHHHhCCcEEEEEEEEec---CCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhh
Q 012797 266 KGYSVVNVKC-RDRAKLMFDIVCTLTDMQYVVFHAAISSD---GPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRR 341 (456)
Q Consensus 266 ~~~~~v~V~~-~Dr~gll~~i~~~L~~~~l~I~~a~i~t~---~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l~~ 341 (456)
++.+.|+|.+ +|+||.++++..+|++.|+||.-...... .|...-.|.|...+. +...++...+...+.-
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~d~------~~a~~~L~~~~~~~~~ 87 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFA------QEALEALEPVLAEIGG 87 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGGGH------HHHHHHHHHHHHHHCC
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehHHH------HHHHHHHHHHHHHhCC
Confidence 3667788876 89999999999999999999987554322 233334577743111 1111221222222321
Q ss_pred c---CCCceEEEEEeCC---CcchHHHHHHHHHHCCceEEEE
Q 012797 342 R---VSEGLSLELCAKD---RVGLLSEVTRILRENGLSVTRA 377 (456)
Q Consensus 342 r---~~~~~~lev~~~D---rpGlL~~It~~l~~~gi~I~~a 377 (456)
. ......+.|.|.+ +||+++++.++|++.||||...
T Consensus 88 ~v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 129 (167)
T 2dt9_A 88 EAILRPDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMI 129 (167)
T ss_dssp EEEEECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEE
T ss_pred cEEEeCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEE
Confidence 1 1244668899987 9999999999999999999655
No 28
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.11 E-value=0.0034 Score=56.39 Aligned_cols=111 Identities=18% Similarity=0.201 Sum_probs=73.5
Q ss_pred CCeEEEEE-EecCCcchHHHHHHHHhhCCceEEEEEEEEe---CCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCC
Q 012797 33 PECTVVKV-DSVNKPGILLEVVQVLSDLDLIITKAYISSD---GGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHI 108 (456)
Q Consensus 33 ~~~~~V~V-~~~DrpGLl~~i~~vL~~~glnI~~A~i~t~---~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~l~~ 108 (456)
.+.+.|+| ..+|+||.++++.+.|++.|+||.--...+. ++..--.|.+... ..+...+.|+... .
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~~---------d~~~a~~~l~~~~-~ 82 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRS---------DGRRAMEILKKLQ-V 82 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHH---------HHHHHHHHHHTTT-T
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEccc---------cHHHHHHHHHHHH-H
Confidence 35778888 4799999999999999999999986555442 3333223666531 1122233443311 0
Q ss_pred CCCcccCCcccccccCCCceEEEEEEeC---CcccHHHHHHHHHHhCCceEEEEE
Q 012797 109 TAGAKTWPSKQVGVHSVGDHTAIELIGR---DRPGLLSEISAVLANLRFNVAAAE 160 (456)
Q Consensus 109 ~~~~~~~~~~~v~~~~~~~~t~i~v~~~---DrpGLL~~I~~~l~~~gi~I~~a~ 160 (456)
.... ..+ ....+...|+|.|. ++||+++++..+|++.|+||....
T Consensus 83 ~~~~-----~~v--~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~is 130 (178)
T 2dtj_A 83 QGNW-----TNV--LYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS 130 (178)
T ss_dssp TTTC-----SEE--EEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred hcCC-----CeE--EEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEE
Confidence 0000 011 12346788888887 899999999999999999998854
No 29
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.89 E-value=0.003 Score=56.07 Aligned_cols=63 Identities=16% Similarity=0.279 Sum_probs=50.3
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCceEEEEEEec-CC-ceeEEEEEEEeCCCCCcCCChHHHHHHHHHHHH
Q 012797 128 HTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWT-HN-RRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKN 198 (456)
Q Consensus 128 ~t~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~T-~~-~~~~d~F~v~~~~~g~~l~d~~~~~~l~~~L~~ 198 (456)
...|+|.+.|+||+|++|+++|+++|+||.+..+.+ .+ +...-+|.+.. +...++.+...|.+
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~--------d~~~leqI~kqL~K 67 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVG--------DEKVLEQIEKQLHK 67 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEES--------CHHHHHHHHHHHHH
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEec--------cHHHHHHHHHHHcC
Confidence 467899999999999999999999999999999875 43 55666666653 24667888877765
No 30
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=96.86 E-value=0.063 Score=57.30 Aligned_cols=184 Identities=19% Similarity=0.222 Sum_probs=113.7
Q ss_pred ceEEEEEEe-CCcccHHHHHHHHHHhCCceEEEEEEec-CCceeEEEEEEEeCCCCCcCCChHHHHHHHHHHHHHhcCCC
Q 012797 127 DHTAIELIG-RDRPGLLSEISAVLANLRFNVAAAEVWT-HNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNILRGCD 204 (456)
Q Consensus 127 ~~t~i~v~~-~DrpGLL~~I~~~l~~~gi~I~~a~i~T-~~~~~~d~F~v~~~~~g~~l~d~~~~~~l~~~L~~~L~~~~ 204 (456)
+.+.|++.. .|.||++++|...|+++|++|.-..... .++...-.|.+... ...+.+..|.+ +..++
T Consensus 269 ~~~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~~~Isftv~~~----------~~~~a~~~l~~-~~~el 337 (600)
T 3l76_A 269 DQAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKD----------LLNTAEAVTSA-IAPAL 337 (600)
T ss_dssp CCEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTEEEEEEEECGG----------GHHHHHHHHHH-HGGGG
T ss_pred CEEEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCCceEEEEEeHH----------HHHHHHHHHHH-HHHHh
Confidence 344555553 6899999999999999999997765544 44555556666552 12222222222 21111
Q ss_pred CcccccccceeecccccCchhHHHHhhhcCccccCCCCCcCccCCCCCCCCCEEEEEecCCCCeEEEEEEee---CchhH
Q 012797 205 DEDSEKVARTSFSMGFTHVDRRLHQMFFADRDYEGGGVTTADQVDHTPSFKPEITVERLEDKGYSVVNVKCR---DRAKL 281 (456)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~n~~~~~~~~v~V~~~---Dr~gl 281 (456)
. . + . .......|.++ .+...|.|.|. ++||+
T Consensus 338 ~----~-----------------~----~-----------------~~~~~~~v~~~----~~~a~VsvVG~gm~~~~Gv 371 (600)
T 3l76_A 338 R----S-----------------Y----P-----------------EADQEAEIIVE----KGIAKIAIAGAGMIGRPGI 371 (600)
T ss_dssp S----S-----------------S----T-----------------TCSSSSEEEEE----CSEEEEEEECGGGTTCTTH
T ss_pred h----c-----------------c----c-----------------cccCcceeEec----CCeEEEEEECCCcccCccH
Confidence 0 0 0 0 00001123332 25678899976 68999
Q ss_pred HHHHHHHHHhCCcEEEEEEEEecCCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhhc-CC----------------
Q 012797 282 MFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRRR-VS---------------- 344 (456)
Q Consensus 282 l~~i~~~L~~~~l~I~~a~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l~~r-~~---------------- 344 (456)
.+++..+|++.|+||.-.. ....-+ .|.|.. +..++..++|.+.+... .+
T Consensus 372 ~a~if~aL~~~~Ini~~is---tSe~~I-s~vI~~---------~d~~~Av~aLh~~f~~~~t~~~~~~~~~~~~~v~Gi 438 (600)
T 3l76_A 372 AAKMFKTLADVGVNIEMIS---TSEVKV-SCVIDQ---------RDADRAIAALSNAFGVTLSPPKNQTDTSHLPAVRGV 438 (600)
T ss_dssp HHHHHHHHHHTTCCCCEEE---ECSSEE-EEEEEG---------GGHHHHHHHHHHHTTCCBCCCCCCCC---CCSCCEE
T ss_pred HHHHHHHHHhCCCcEEEEe---cCCCEE-EEEEcH---------HHHHHHHHHHHHhhcccCCCccccccccccCceEEE
Confidence 9999999999999997554 333333 355532 33455556676665321 10
Q ss_pred ----CceEEEEE-eCCCcchHHHHHHHHHHCCceEEEEEEe
Q 012797 345 ----EGLSLELC-AKDRVGLLSEVTRILRENGLSVTRAGVS 380 (456)
Q Consensus 345 ----~~~~lev~-~~DrpGlL~~It~~l~~~gi~I~~a~i~ 380 (456)
+-..|.|. .+|+||+.++|-..|++.||+|....-+
T Consensus 439 a~~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~ 479 (600)
T 3l76_A 439 ALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQS 479 (600)
T ss_dssp EEECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEE
T ss_pred EeeCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEec
Confidence 12345553 4799999999999999999999766544
No 31
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.85 E-value=0.0029 Score=56.18 Aligned_cols=63 Identities=17% Similarity=0.295 Sum_probs=49.7
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHCCceEEEEEEeecCc--eeeeEEEEEeCCCCCCChHHHHHHHHHHHHh
Q 012797 347 LSLELCAKDRVGLLSEVTRILRENGLSVTRAGVSTVGE--QAVNVFYVRDASGNPVDMKTIEALRKEIGHT 415 (456)
Q Consensus 347 ~~lev~~~DrpGlL~~It~~l~~~gi~I~~a~i~T~g~--~~~d~F~v~d~~g~~l~~~~~~~L~~~l~~~ 415 (456)
+.|.|.+.||||+|++|+.+|+++|+||.++.+.+..+ ...=+|.+. +. +..+++|.++|.+.
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~---~d---~~~leqI~kqL~Kl 68 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV---GD---EKVLEQIEKQLHKL 68 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE---SC---HHHHHHHHHHHHHS
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe---cc---HHHHHHHHHHHcCC
Confidence 56899999999999999999999999999999875543 334345553 21 46788999998875
No 32
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.72 E-value=0.0047 Score=54.79 Aligned_cols=64 Identities=17% Similarity=0.282 Sum_probs=50.9
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCceEEEEEEec-C-CceeEEEEEEEeCCCCCcCCChHHHHHHHHHHHHH
Q 012797 128 HTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWT-H-NRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNI 199 (456)
Q Consensus 128 ~t~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~T-~-~~~~~d~F~v~~~~~g~~l~d~~~~~~l~~~L~~~ 199 (456)
...|+|...|+||.|++|+++|+++|+||.+..+.+ . .+...-+|.+..+ ...++.+...|.+.
T Consensus 4 ~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d--------~~~leql~kQL~Kl 69 (165)
T 2pc6_A 4 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGP--------DEIVEQITKQLNKL 69 (165)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEEC--------HHHHHHHHHHHHHS
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEecc--------HHHHHHHHHHhcCC
Confidence 467899999999999999999999999999999875 4 3556666677652 45677787777653
No 33
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.59 E-value=0.0042 Score=55.15 Aligned_cols=106 Identities=14% Similarity=0.218 Sum_probs=72.6
Q ss_pred CCeEEEEEEe-cCCcchHHHHHHHHhhCCceEEEEEEEEe---CCEEEEEEEEEeCCCCCCCChhHHHHHHH---HHCCC
Q 012797 33 PECTVVKVDS-VNKPGILLEVVQVLSDLDLIITKAYISSD---GGWFMDVFHVIDQQGKKITDGKTIDYIEK---ALGPK 105 (456)
Q Consensus 33 ~~~~~V~V~~-~DrpGLl~~i~~vL~~~glnI~~A~i~t~---~g~~~d~f~V~~~~g~~~~~~~~~~~L~~---~L~~~ 105 (456)
.+...|+|.+ +|+||.++++.++|++.|+||.--..... .|..--.|.|...+. +...+.|++ .+.-
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~d~-----~~a~~~L~~~~~~~~~- 87 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFA-----QEALEALEPVLAEIGG- 87 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGGGH-----HHHHHHHHHHHHHHCC-
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehHHH-----HHHHHHHHHHHHHhCC-
Confidence 4577888876 89999999999999999999986444322 344444577753211 122233332 2320
Q ss_pred CCCCCCcccCCcccccccCCCceEEEEEEeCC---cccHHHHHHHHHHhCCceEEEE
Q 012797 106 GHITAGAKTWPSKQVGVHSVGDHTAIELIGRD---RPGLLSEISAVLANLRFNVAAA 159 (456)
Q Consensus 106 l~~~~~~~~~~~~~v~~~~~~~~t~i~v~~~D---rpGLL~~I~~~l~~~gi~I~~a 159 (456)
. .....+...+.|.|.+ +||+++++..+|++.|+||...
T Consensus 88 -------------~--v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 129 (167)
T 2dt9_A 88 -------------E--AILRPDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMI 129 (167)
T ss_dssp -------------E--EEEECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEE
T ss_pred -------------c--EEEeCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEE
Confidence 0 1123467889999987 9999999999999999999544
No 34
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.57 E-value=0.0084 Score=53.01 Aligned_cols=59 Identities=25% Similarity=0.496 Sum_probs=44.0
Q ss_pred EEEEEeCCCcchHHHHHHHHHHCCceEEEEEEeecCceeeeEEEEEeCCCCCCChHHHHHHHHHHHH
Q 012797 348 SLELCAKDRVGLLSEVTRILRENGLSVTRAGVSTVGEQAVNVFYVRDASGNPVDMKTIEALRKEIGH 414 (456)
Q Consensus 348 ~lev~~~DrpGlL~~It~~l~~~gi~I~~a~i~T~g~~~~d~F~v~d~~g~~l~~~~~~~L~~~l~~ 414 (456)
.|+|.+.||+|+|++|+++|+++++||..+.+.+.|. +|+.-+ .........|..++..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g~-----i~~~~~---~~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGR-----IYLNFA---ELEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETTTE-----EEEEEC---CCCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecCCE-----EEEEEE---eCCHHHHHHHHHHHHc
Confidence 4899999999999999999999999999999977632 555433 1223445555555554
No 35
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.55 E-value=0.0073 Score=53.55 Aligned_cols=63 Identities=16% Similarity=0.289 Sum_probs=49.5
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHCCceEEEEEEeecC--ceeeeEEEEEeCCCCCCChHHHHHHHHHHHHh
Q 012797 347 LSLELCAKDRVGLLSEVTRILRENGLSVTRAGVSTVG--EQAVNVFYVRDASGNPVDMKTIEALRKEIGHT 415 (456)
Q Consensus 347 ~~lev~~~DrpGlL~~It~~l~~~gi~I~~a~i~T~g--~~~~d~F~v~d~~g~~l~~~~~~~L~~~l~~~ 415 (456)
+.|.|...||||+|++|+.+|+++|+||.++.+.+.. +...=+|.+. +. +..+++|.++|.+.
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~---~d---~~~leql~kQL~Kl 69 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTN---GP---DEIVEQITKQLNKL 69 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEE---EC---HHHHHHHHHHHHHS
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEe---cc---HHHHHHHHHHhcCC
Confidence 5689999999999999999999999999999987544 3344355553 21 46788999998875
No 36
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.41 E-value=0.25 Score=44.65 Aligned_cols=123 Identities=18% Similarity=0.179 Sum_probs=82.8
Q ss_pred eEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEE-EeC-CEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCCCCc
Q 012797 35 CTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYIS-SDG-GWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHITAGA 112 (456)
Q Consensus 35 ~~~V~V~~~DrpGLl~~i~~vL~~~glnI~~A~i~-t~~-g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~l~~~~~~ 112 (456)
...|+|+..|+||.|++++++|+..|+||.+-.+. |.+ |..--++.|... +...++|.+.|....+.-...
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~-------e~~ieqL~kQL~KLidVikV~ 101 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD-------DKTIEQIEKQAYKLVEVVKVT 101 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC-------TTHHHHHHHHHTTSTTEEEEE
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC-------HHHHHHHHHHhcCcCceEEEE
Confidence 56899999999999999999999999999998886 544 666656677532 247788888888753321000
Q ss_pred ccCC--cccccccCCCceEEEEEEeCCcccHHHHHHHHHHhCCceEEEEEEecCCceeEEEEEEEeC
Q 012797 113 KTWP--SKQVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDD 177 (456)
Q Consensus 113 ~~~~--~~~v~~~~~~~~t~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~T~~~~~~d~F~v~~~ 177 (456)
.... ... -...-..+.|.+... -.+|.+....++.+|.+..- -.-++.+++.
T Consensus 102 dl~~~~~~~----v~REl~LiKV~~~~~---r~ei~~i~~~fra~ivDv~~------~s~~iE~tG~ 155 (193)
T 2fgc_A 102 PIDPLPENR----VEREMALIKVRFDED---KQEIFQLVEIFRGKIIDVSR------EGAIIEITGA 155 (193)
T ss_dssp ECCSSGGGE----EEEEEEEEEEECSSC---HHHHHHHHHHTTCEEEEECS------SEEEEEEEEC
T ss_pred EecCCCCcc----ceeEEEEEEEeCCcC---HHHHHHHHHHcCCEEEEEcC------CEEEEEEcCC
Confidence 0000 000 112456777776543 67888888888888887742 2345777773
No 37
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.27 E-value=0.032 Score=50.17 Aligned_cols=110 Identities=19% Similarity=0.255 Sum_probs=72.1
Q ss_pred CeEEEEEE-ecCCcchHHHHHHHHhhCCceEEEEEEEE-e--CCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCC
Q 012797 34 ECTVVKVD-SVNKPGILLEVVQVLSDLDLIITKAYISS-D--GGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHIT 109 (456)
Q Consensus 34 ~~~~V~V~-~~DrpGLl~~i~~vL~~~glnI~~A~i~t-~--~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~l~~~ 109 (456)
+.+.|+|. .+|+||.++++...|++.|+||.--.... . +|..--.|.|...+-.. ..+.+++++..+..
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~~~~--a~~~L~~~~~el~~----- 87 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVGPA--AVEKLDSLRNEIGF----- 87 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTTHHH--HHHHHHHTHHHHCC-----
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhHHHH--HHHHHHHHHHhcCc-----
Confidence 45566654 68999999999999999999997544332 2 56655567775321110 01122222222210
Q ss_pred CCcccCCcccccccCCCceEEEEEEeC---CcccHHHHHHHHHHhCCceEEEEE
Q 012797 110 AGAKTWPSKQVGVHSVGDHTAIELIGR---DRPGLLSEISAVLANLRFNVAAAE 160 (456)
Q Consensus 110 ~~~~~~~~~~v~~~~~~~~t~i~v~~~---DrpGLL~~I~~~l~~~gi~I~~a~ 160 (456)
..+ .-..+...+.|.|. ++||+.+++..+|++.|+||....
T Consensus 88 --------~~v--~~~~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 88 --------SQL--LYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp --------SEE--EEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred --------ceE--EEeCCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 011 12245778888876 899999999999999999998877
No 38
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.22 E-value=0.018 Score=52.18 Aligned_cols=64 Identities=17% Similarity=0.389 Sum_probs=49.1
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCceEEEEEEe-cCC-ceeEEEEEEEeCCCCCcCCChHHHHHHHHHHHHH
Q 012797 128 HTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVW-THN-RRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNI 199 (456)
Q Consensus 128 ~t~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~-T~~-~~~~d~F~v~~~~~g~~l~d~~~~~~l~~~L~~~ 199 (456)
...|+|...|+||.|++|+++|+..|+||.+..+. |.+ +...-++.+..+ ...+++|...|.+.
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~--------e~~ieqL~kQL~KL 94 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD--------DKTIEQIEKQAYKL 94 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC--------TTHHHHHHHHHTTS
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC--------HHHHHHHHHHhcCc
Confidence 57899999999999999999999999999998886 544 445556666652 23456777666543
No 39
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=95.96 E-value=0.071 Score=47.85 Aligned_cols=106 Identities=8% Similarity=0.029 Sum_probs=69.3
Q ss_pred CeEEEEEE-eeCchhHHHHHHHHHHhCCcEEEEEEEEec---CCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhh-
Q 012797 267 GYSVVNVK-CRDRAKLMFDIVCTLTDMQYVVFHAAISSD---GPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRR- 341 (456)
Q Consensus 267 ~~~~v~V~-~~Dr~gll~~i~~~L~~~~l~I~~a~i~t~---~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l~~- 341 (456)
+.+.|+|. .+|+||.++++...|++.|+||.--..... .|..--.|.|...+ .....++.+.+.+.+.-
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~------~~~a~~~L~~~~~el~~~ 88 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDV------GPAAVEKLDSLRNEIGFS 88 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTT------HHHHHHHHHHTHHHHCCS
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhH------HHHHHHHHHHHHHhcCcc
Confidence 44555554 689999999999999999999975543222 34444457774321 11222222222222210
Q ss_pred c---CCCceEEEEEeC---CCcchHHHHHHHHHHCCceEEEEE
Q 012797 342 R---VSEGLSLELCAK---DRVGLLSEVTRILRENGLSVTRAG 378 (456)
Q Consensus 342 r---~~~~~~lev~~~---DrpGlL~~It~~l~~~gi~I~~a~ 378 (456)
. ......|.|.|. ++||+.+++.++|++.||||....
T Consensus 89 ~v~~~~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 89 QLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp EEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred eEEEeCCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 1 124567777776 899999999999999999999876
No 40
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.83 E-value=0.035 Score=48.87 Aligned_cols=59 Identities=20% Similarity=0.282 Sum_probs=44.9
Q ss_pred EEEEEeCCcccHHHHHHHHHHhCCceEEEEEEecCCceeEEEEEEEeCCCCCcCCChHHHHHHHHHHHH
Q 012797 130 AIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKN 198 (456)
Q Consensus 130 ~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~T~~~~~~d~F~v~~~~~g~~l~d~~~~~~l~~~L~~ 198 (456)
.|+|.|.||+|+|++|+.+|+++++||..+.+.+.| . +++.-+ . .+.+....+...+..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g-~----i~~~~~--~---~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIG-R----IYLNFA--E---LEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETTT-E----EEEEEC--C---CCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecCC-E----EEEEEE--e---CCHHHHHHHHHHHHc
Confidence 478999999999999999999999999999997763 2 445542 1 124556677766653
No 41
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.70 E-value=0.055 Score=49.46 Aligned_cols=107 Identities=8% Similarity=0.047 Sum_probs=69.3
Q ss_pred CCeEEEEEE-eeCchhHHHHHHHHHHhCCcEEEEEEEEec---CCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhh
Q 012797 266 KGYSVVNVK-CRDRAKLMFDIVCTLTDMQYVVFHAAISSD---GPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRR 341 (456)
Q Consensus 266 ~~~~~v~V~-~~Dr~gll~~i~~~L~~~~l~I~~a~i~t~---~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l~~ 341 (456)
++...|++. .+|+||+.+++...|++.|+||---..... ++.....|.+...+ ......+...+...+..
T Consensus 33 ~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~d------~~~~~~~l~~~~~~~~~ 106 (200)
T 4go7_X 33 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDV------GPAAVEKLDSLRNEIGF 106 (200)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGGG------HHHHHHHHHTTHHHHCC
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchhh------HHHHHHHHHHHHhhhce
Confidence 356777876 599999999999999999999875543322 23444457664311 11222222222222211
Q ss_pred -c---CCCceEEEEEe---CCCcchHHHHHHHHHHCCceEEEEE
Q 012797 342 -R---VSEGLSLELCA---KDRVGLLSEVTRILRENGLSVTRAG 378 (456)
Q Consensus 342 -r---~~~~~~lev~~---~DrpGlL~~It~~l~~~gi~I~~a~ 378 (456)
+ .+....|.|.| ..+||+.+++-++|++.||||...-
T Consensus 107 ~~v~~~~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIs 150 (200)
T 4go7_X 107 SQLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 150 (200)
T ss_dssp SEEEEECCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred eeEEEecCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEE
Confidence 1 12334555555 4899999999999999999999874
No 42
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.50 E-value=0.019 Score=52.86 Aligned_cols=49 Identities=12% Similarity=0.271 Sum_probs=35.8
Q ss_pred ceEEEEEEeCCcccHHHHHHHHHHhCCceEEEEEEecCC-----ceeEEEEEEE
Q 012797 127 DHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHN-----RRIACVLYVN 175 (456)
Q Consensus 127 ~~t~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~T~~-----~~~~d~F~v~ 175 (456)
....|.+.+.||||+|++|+.+|+++++||...+..+.. +.+.-.+.+.
T Consensus 3 ~~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~ 56 (223)
T 1y7p_A 3 MLRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIE 56 (223)
T ss_dssp -CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEEC
T ss_pred ceEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEEC
Confidence 356889999999999999999999999999999999853 3454444443
No 43
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.36 E-value=0.15 Score=51.93 Aligned_cols=103 Identities=13% Similarity=0.094 Sum_probs=70.6
Q ss_pred CCeEEEEEE-eeCchhHHHHHHHHHHhCCcEEEEEEEEec---CCceEEEEEEEccCCCCCCCHHHHHHHHHHHHH---H
Q 012797 266 KGYSVVNVK-CRDRAKLMFDIVCTLTDMQYVVFHAAISSD---GPHASQEYYIRHMDGCILDTEGEKERVIKCLEA---A 338 (456)
Q Consensus 266 ~~~~~v~V~-~~Dr~gll~~i~~~L~~~~l~I~~a~i~t~---~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~---~ 338 (456)
++.+.|+|. .+|+||.++++...|+++|+||......+. .|...-.|.|... +. ++..+.|++ .
T Consensus 262 ~~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~------~~---~~a~~~l~~~~~~ 332 (421)
T 3ab4_A 262 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS------DG---RRAMEILKKLQVQ 332 (421)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT------TH---HHHHHHHHHHHTT
T ss_pred CCEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech------hH---HHHHHHHHHHHHH
Confidence 356788888 699999999999999999999987655333 3433445777431 11 122233333 2
Q ss_pred Hhh-c---CCCceEEEEEeC---CCcchHHHHHHHHHHCCceEEEE
Q 012797 339 IRR-R---VSEGLSLELCAK---DRVGLLSEVTRILRENGLSVTRA 377 (456)
Q Consensus 339 l~~-r---~~~~~~lev~~~---DrpGlL~~It~~l~~~gi~I~~a 377 (456)
+.- . ..+...+.|.|. ++||+++++.++|.+.||||...
T Consensus 333 ~~~~~v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 378 (421)
T 3ab4_A 333 GNWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI 378 (421)
T ss_dssp TTCSEEEEECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEE
T ss_pred cCCceEEEeCCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEE
Confidence 211 0 123456788886 79999999999999999999955
No 44
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.12 E-value=0.44 Score=48.44 Aligned_cols=109 Identities=21% Similarity=0.285 Sum_probs=72.9
Q ss_pred CeEEEEEE-ecCCcchHHHHHHHHhhCCceEEEEEEEEe---CCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCC
Q 012797 34 ECTVVKVD-SVNKPGILLEVVQVLSDLDLIITKAYISSD---GGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHIT 109 (456)
Q Consensus 34 ~~~~V~V~-~~DrpGLl~~i~~vL~~~glnI~~A~i~t~---~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~l~~~ 109 (456)
+.+.|+|. .+|+||.++++.+.|+++|+||.--.+.|. +|..--.|.|... . .++..+.|++ +...+...
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~--~---~~~a~~~l~~-~~~~~~~~ 336 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS--D---GRRAMEILKK-LQVQGNWT 336 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT--T---HHHHHHHHHH-HHTTTTCS
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech--h---HHHHHHHHHH-HHHHcCCc
Confidence 34567777 699999999999999999999986654432 4544445777531 1 1223344443 32222210
Q ss_pred CCcccCCcccccccCCCceEEEEEEeC---CcccHHHHHHHHHHhCCceEEEE
Q 012797 110 AGAKTWPSKQVGVHSVGDHTAIELIGR---DRPGLLSEISAVLANLRFNVAAA 159 (456)
Q Consensus 110 ~~~~~~~~~~v~~~~~~~~t~i~v~~~---DrpGLL~~I~~~l~~~gi~I~~a 159 (456)
.+ .-..+...+.|.|. ++||+++++..+|++.|+||.-.
T Consensus 337 ---------~v--~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 378 (421)
T 3ab4_A 337 ---------NV--LYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI 378 (421)
T ss_dssp ---------EE--EEECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEE
T ss_pred ---------eE--EEeCCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEE
Confidence 11 11346778888886 79999999999999999999844
No 45
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=94.89 E-value=0.15 Score=52.71 Aligned_cols=112 Identities=13% Similarity=0.188 Sum_probs=74.9
Q ss_pred CeEEEEEEe---eCchhHHHHHHHHHHhCCcEEEEEEEEecCCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHH----
Q 012797 267 GYSVVNVKC---RDRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAI---- 339 (456)
Q Consensus 267 ~~~~v~V~~---~Dr~gll~~i~~~L~~~~l~I~~a~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l---- 339 (456)
+...|+|.+ +++||+++++..+|+++|+||.-....+.. . --.|.|... ..++..+.|.+.+
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse-~-~Is~~V~~~---------d~~~a~~~L~~~l~~~~ 385 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSE-T-NISLVVSEE---------DVDKALKALKREFGDFG 385 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTT-C-CEEEEEEGG---------GHHHHHHHHHHHHCC--
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCC-C-EEEEEEech---------HHHHHHHHHHHHHhhhc
Confidence 567889986 688999999999999999998766553322 2 224777432 1334445555544
Q ss_pred ----hhc--------CCCceEEEEEeC---CCcchHHHHHHHHHHCCceEEEEEEeecCceeee-EEEE
Q 012797 340 ----RRR--------VSEGLSLELCAK---DRVGLLSEVTRILRENGLSVTRAGVSTVGEQAVN-VFYV 392 (456)
Q Consensus 340 ----~~r--------~~~~~~lev~~~---DrpGlL~~It~~l~~~gi~I~~a~i~T~g~~~~d-~F~v 392 (456)
... ..+...+.|.|. ++||+++++.++|.+.||||... ++|..... .|.|
T Consensus 386 ~~~~~~~~~~~~v~~~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~mi---sqgtSe~~Is~vV 451 (473)
T 3c1m_A 386 KKSFLNNNLIRDVSVDKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMI---AQGSSEVNISFVI 451 (473)
T ss_dssp --CTTSCCCEEEEEEEEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEE---EESSCSSEEEEEE
T ss_pred ccccccccccceEEEeCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEE---ecCCCCceEEEEE
Confidence 211 012345778886 59999999999999999999443 44544444 3444
No 46
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=94.84 E-value=0.053 Score=49.88 Aligned_cols=48 Identities=19% Similarity=0.131 Sum_probs=36.9
Q ss_pred eEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEEe-----CCEEEEEEEEE
Q 012797 35 CTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISSD-----GGWFMDVFHVI 82 (456)
Q Consensus 35 ~~~V~V~~~DrpGLl~~i~~vL~~~glnI~~A~i~t~-----~g~~~d~f~V~ 82 (456)
...|.|.+.||||+|++++.+|++++.||...+..++ ++.+.-.+.+.
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~ 56 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIE 56 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEEC
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEEC
Confidence 4678999999999999999999999999999999984 56766555554
No 47
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=94.73 E-value=0.057 Score=49.36 Aligned_cols=121 Identities=18% Similarity=0.186 Sum_probs=74.6
Q ss_pred CCCEE-EEecCCCCCeEEEEEE-ecCCcchHHHHHHHHhhCCceEEEEEEEE---eCCEEEEEEEEEeCCCCCCCChhHH
Q 012797 21 NPPRA-SVDNSSCPECTVVKVD-SVNKPGILLEVVQVLSDLDLIITKAYISS---DGGWFMDVFHVIDQQGKKITDGKTI 95 (456)
Q Consensus 21 ~~p~V-~v~~~~~~~~~~V~V~-~~DrpGLl~~i~~vL~~~glnI~~A~i~t---~~g~~~d~f~V~~~~g~~~~~~~~~ 95 (456)
.+|.| -|... .+...|+|. .||+||..+++.+.|++.|+||---.... .++.....|.+...+ .
T Consensus 22 E~~vVtGIa~~--~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~d---------~ 90 (200)
T 4go7_X 22 EDPILTGVAHD--RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDV---------G 90 (200)
T ss_dssp CSCEEEEEEEE--CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGGG---------H
T ss_pred ccCcEEEEEcc--CCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchhh---------H
Confidence 45544 33322 356777776 69999999999999999999997543322 245565567775321 1
Q ss_pred HHHHHHHCCCCCCCCCcccCCcccccccCCCceEEEEEEe---CCcccHHHHHHHHHHhCCceEEEEE
Q 012797 96 DYIEKALGPKGHITAGAKTWPSKQVGVHSVGDHTAIELIG---RDRPGLLSEISAVLANLRFNVAAAE 160 (456)
Q Consensus 96 ~~L~~~L~~~l~~~~~~~~~~~~~v~~~~~~~~t~i~v~~---~DrpGLL~~I~~~l~~~gi~I~~a~ 160 (456)
+...+.|..... . .. ...+ ..+.+...+.+.| ..+||+.+++..+|++.|+||.-..
T Consensus 91 ~~~~~~l~~~~~-~----~~-~~~v--~~~~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIs 150 (200)
T 4go7_X 91 PAAVEKLDSLRN-E----IG-FSQL--LYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 150 (200)
T ss_dssp HHHHHHHHTTHH-H----HC-CSEE--EEECCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred HHHHHHHHHHHh-h----hc-eeeE--EEecCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEE
Confidence 222222322100 0 00 0011 1123455666664 5899999999999999999998875
No 48
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=94.22 E-value=0.25 Score=48.16 Aligned_cols=106 Identities=14% Similarity=0.248 Sum_probs=69.0
Q ss_pred HHhCC-cEEEEEEEEecCCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhhcCCCceEEEEEeC-CCcchHHHHHHH
Q 012797 289 LTDMQ-YVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRRRVSEGLSLELCAK-DRVGLLSEVTRI 366 (456)
Q Consensus 289 L~~~~-l~I~~a~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l~~r~~~~~~lev~~~-DrpGlL~~It~~ 366 (456)
-..+| |+|..-.|....+.. -.|+|.......... .....|.|-+..+ |+||-|+++-..
T Consensus 161 A~~Yg~L~il~~~I~D~~~N~-TRFlvl~~~~~~~~~-----------------~~~~kTSl~f~~~~~~pGaL~~~L~~ 222 (313)
T 3mwb_A 161 AAEQPGLNVLAEDIGDNPDAV-TRFILVSRPGALPER-----------------TGADKTTVVVPLPEDHPGALMEILDQ 222 (313)
T ss_dssp HHHCTTCEEEESCCCSCTTCE-EEEEEEECSCCCCCC-----------------CSSEEEEEEEECSSCCTTHHHHHHHH
T ss_pred HHHcCChhhhhhcccCCCcce-eEEEEEecCCCCCCC-----------------CCCCeEEEEEEeCCCCCCHHHHHHHH
Confidence 34578 999987776653322 248876554321110 0123567777775 999999999999
Q ss_pred HHHCCceEEEEEEeecCcee-eeEEEEEeCCCCCCChHHHHHHHHHHHH
Q 012797 367 LRENGLSVTRAGVSTVGEQA-VNVFYVRDASGNPVDMKTIEALRKEIGH 414 (456)
Q Consensus 367 l~~~gi~I~~a~i~T~g~~~-~d~F~v~d~~g~~l~~~~~~~L~~~l~~ 414 (456)
|+.+|||+.+.+..-....- +=.||| |.+|..-+ ..+++.-++|..
T Consensus 223 Fa~~gINLtkIESRP~~~~~~~Y~Ffi-D~eg~~~d-~~v~~aL~~L~~ 269 (313)
T 3mwb_A 223 FASRGVNLSRIESRPTGQYLGHYFFSI-DADGHATD-SRVADALAGLHR 269 (313)
T ss_dssp HHTTTCCEEEEEEEECSSSTTSEEEEE-EEESCTTS-HHHHHHHHHHHH
T ss_pred HHHCCccEEEEEEeecCCCCccEEEEE-EEeCCCCc-HHHHHHHHHHHH
Confidence 99999999999987766554 447888 66676533 333333334443
No 49
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=94.08 E-value=0.2 Score=51.81 Aligned_cols=114 Identities=13% Similarity=0.179 Sum_probs=72.0
Q ss_pred CeEEEEEEe---cCCcchHHHHHHHHhhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCCC
Q 012797 34 ECTVVKVDS---VNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHITA 110 (456)
Q Consensus 34 ~~~~V~V~~---~DrpGLl~~i~~vL~~~glnI~~A~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~l~~~~ 110 (456)
+...|+|.+ +++||..+++..+|+++|+||.--...+. .. --.|.|...+ .++..+.|++.+.+....
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~ts-e~-~Is~~V~~~d-----~~~a~~~L~~~l~~~~~~-- 387 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSS-ET-NISLVVSEED-----VDKALKALKREFGDFGKK-- 387 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCT-TC-CEEEEEEGGG-----HHHHHHHHHHHHCC------
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCC-CC-EEEEEEechH-----HHHHHHHHHHHHhhhccc--
Confidence 456778886 67889999999999999999976554332 22 2236665321 135667777777111000
Q ss_pred CcccCCc-ccccccCCCceEEEEEEeC---CcccHHHHHHHHHHhCCceEEE
Q 012797 111 GAKTWPS-KQVGVHSVGDHTAIELIGR---DRPGLLSEISAVLANLRFNVAA 158 (456)
Q Consensus 111 ~~~~~~~-~~v~~~~~~~~t~i~v~~~---DrpGLL~~I~~~l~~~gi~I~~ 158 (456)
.+..... ..+ .-..+...+.|.|. ++||.++++..+|++.|+||.-
T Consensus 388 ~~~~~~~~~~v--~~~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~m 437 (473)
T 3c1m_A 388 SFLNNNLIRDV--SVDKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKM 437 (473)
T ss_dssp CTTSCCCEEEE--EEEEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCE
T ss_pred ccccccccceE--EEeCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEE
Confidence 0000000 011 11345777888886 5899999999999999999943
No 50
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=93.94 E-value=0.35 Score=46.05 Aligned_cols=100 Identities=14% Similarity=0.203 Sum_probs=66.3
Q ss_pred HhCCcEEEEEEEEecCCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhhcCCCceEEEEEe---CCCcchHHHHHHH
Q 012797 290 TDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRRRVSEGLSLELCA---KDRVGLLSEVTRI 366 (456)
Q Consensus 290 ~~~~l~I~~a~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l~~r~~~~~~lev~~---~DrpGlL~~It~~ 366 (456)
..+||+|..-.|....+.. -.|+|..... +.. ...|.|-+.. .|+||-|+++-..
T Consensus 152 ~~ygL~il~~~I~D~~~N~-TRF~vl~~~~-~~~--------------------~~ktsl~f~~~~~~~~pGaL~~~L~~ 209 (267)
T 2qmw_A 152 EAYGFTPIDTHIEDYPHNV-TRFLVIKNQQ-QFD--------------------QNATSLMFLITPMHDKPGLLASVLNT 209 (267)
T ss_dssp GGGTCCEEEECCCSCSCCE-EEEEEEESCC-CCC--------------------SSCSEEEEEEEESSCCTTHHHHHHHH
T ss_pred HHCCCcEeeccccCCCCCc-eEEEEEecCC-CCC--------------------CCeEEEEEEcCCCCCCcChHHHHHHH
Confidence 3458888888776654322 2477765443 110 1356677777 8999999999999
Q ss_pred HHHCCceEEEEEEeecCce-eeeEEEEEeCCCCCCChHHHHHHHHHHHH
Q 012797 367 LRENGLSVTRAGVSTVGEQ-AVNVFYVRDASGNPVDMKTIEALRKEIGH 414 (456)
Q Consensus 367 l~~~gi~I~~a~i~T~g~~-~~d~F~v~d~~g~~l~~~~~~~L~~~l~~ 414 (456)
|+.+|||+.+.+....... .+=.||| |.+ .. .+..+++.-++|..
T Consensus 210 Fa~~gINLtkIESRP~~~~~~~Y~Ffi-D~e-~~-~d~~v~~aL~~L~~ 255 (267)
T 2qmw_A 210 FALFNINLSWIESRPLKTQLGMYRFFV-QAD-SA-ITTDIKKVIAILET 255 (267)
T ss_dssp HHTTTCCEEEEEEEECSSSTTCEEEEE-EES-CC-SCHHHHHHHHHHHH
T ss_pred HHHcCCCeeEEEEeecCCCCccEEEEE-EEe-cC-CcHHHHHHHHHHHH
Confidence 9999999999998877665 4458888 444 33 33333433344433
No 51
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=92.70 E-value=0.27 Score=47.31 Aligned_cols=55 Identities=18% Similarity=0.253 Sum_probs=44.1
Q ss_pred ceEEEEEeCCCcchHHHHHHHHHHCCceEEEEEEeecCce-eeeEEEEEeCCCCCCC
Q 012797 346 GLSLELCAKDRVGLLSEVTRILRENGLSVTRAGVSTVGEQ-AVNVFYVRDASGNPVD 401 (456)
Q Consensus 346 ~~~lev~~~DrpGlL~~It~~l~~~gi~I~~a~i~T~g~~-~~d~F~v~d~~g~~l~ 401 (456)
.|.|-+..+|+||-|+++-..|+.+|||+.+.+......+ -+=.||| |.+|..-+
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffv-D~eg~~~d 255 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYA-DFIGHRED 255 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEE-EEESCTTS
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEE-EEecCCCc
Confidence 4566666789999999999999999999999998877665 4457888 66676544
No 52
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=91.30 E-value=0.98 Score=44.27 Aligned_cols=46 Identities=20% Similarity=0.348 Sum_probs=38.5
Q ss_pred CCcchHHHHHHHHHHCCceEEEEEEeecCceeee-EEEEEeCCCCCCC
Q 012797 355 DRVGLLSEVTRILRENGLSVTRAGVSTVGEQAVN-VFYVRDASGNPVD 401 (456)
Q Consensus 355 DrpGlL~~It~~l~~~gi~I~~a~i~T~g~~~~d-~F~v~d~~g~~l~ 401 (456)
|+||-||++-..|+.+|||+.+.+......+-++ .||| |.+|..-+
T Consensus 217 ~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffi-D~eg~~~d 263 (329)
T 3luy_A 217 TGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIV-TLDAAPWE 263 (329)
T ss_dssp CSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEE-EESSCTTS
T ss_pred CCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEE-EEeCCcCC
Confidence 7999999999999999999999998877766555 7777 66686644
No 53
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=91.29 E-value=0.84 Score=46.12 Aligned_cols=50 Identities=22% Similarity=0.318 Sum_probs=44.7
Q ss_pred ceEEEEEEeCCcccHHHHHHHHHHhCCceEEEEEEecCCceeEEEEEEEe
Q 012797 127 DHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVND 176 (456)
Q Consensus 127 ~~t~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~T~~~~~~d~F~v~~ 176 (456)
+...|.+.-.|+||.+..|+.+|.++|+||....+.+.|+.+.-++.+..
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidvD~ 379 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEA 379 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEEC
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEcCC
Confidence 45668889999999999999999999999999999998888888877765
No 54
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=91.01 E-value=0.72 Score=48.27 Aligned_cols=63 Identities=21% Similarity=0.300 Sum_probs=47.4
Q ss_pred CCceEEEEEeCCCcchHHHHHHHHHHCCceEEEEEEeecC--ceeeeEEEEEeCCCCCCChHHHHHHHH
Q 012797 344 SEGLSLELCAKDRVGLLSEVTRILRENGLSVTRAGVSTVG--EQAVNVFYVRDASGNPVDMKTIEALRK 410 (456)
Q Consensus 344 ~~~~~lev~~~DrpGlL~~It~~l~~~gi~I~~a~i~T~g--~~~~d~F~v~d~~g~~l~~~~~~~L~~ 410 (456)
+..+.|-+.-.|+||.+..|+..|.++||||...++.... +.+.=++.+ ..+++++.+++|++
T Consensus 452 ~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~v----d~~~~~~~l~~l~~ 516 (529)
T 1ygy_A 452 AQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRL----DQDVPDDVRTAIAA 516 (529)
T ss_dssp SCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEE----SSCCCHHHHHHHHH
T ss_pred CCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEE----CCCCCHHHHHHHhc
Confidence 3467788899999999999999999999999999998753 334433333 33566666666664
No 55
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=90.96 E-value=1 Score=46.08 Aligned_cols=103 Identities=11% Similarity=0.160 Sum_probs=69.1
Q ss_pred CeEEEEEEe---eCchhHHHHHHHHHHhCCcEEEEEEEEecCCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhh-c
Q 012797 267 GYSVVNVKC---RDRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRR-R 342 (456)
Q Consensus 267 ~~~~v~V~~---~Dr~gll~~i~~~L~~~~l~I~~a~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l~~-r 342 (456)
+.+.|+|.+ ++.||.++++...|+++|++|.... .+. .--.|.|...+-. ...+++.+.|.+.+.- .
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~---~~~-~~is~~V~~~d~~-----~~~~~~~~el~~~~~~~~ 367 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMP---SGV-DSVSLVIEDCKLD-----GKCDKIIEEIKKQCNPDS 367 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBC---EET-TEEEEEEEHHHHT-----TTHHHHHHHHHHHSCCSE
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEe---cCC-CEEEEEEecchHH-----HHHHHHHHHHHHhcCCCc
Confidence 567888886 6999999999999999999997432 222 2224677432211 0223344444433310 1
Q ss_pred ---CCCceEEEEEeC---CCcchHHHHHHHHHHCCceEEEEE
Q 012797 343 ---VSEGLSLELCAK---DRVGLLSEVTRILRENGLSVTRAG 378 (456)
Q Consensus 343 ---~~~~~~lev~~~---DrpGlL~~It~~l~~~gi~I~~a~ 378 (456)
......|.|.|. .+||+.+++.++|++.||||....
T Consensus 368 v~v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIs 409 (446)
T 3tvi_A 368 IEIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMID 409 (446)
T ss_dssp EEEEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEE
Confidence 123457888876 589999999999999999998764
No 56
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=90.80 E-value=0.77 Score=48.07 Aligned_cols=53 Identities=21% Similarity=0.288 Sum_probs=43.9
Q ss_pred CCCceEEEEEEeCCcccHHHHHHHHHHhCCceEEEEEEec--CCceeEEEEEEEe
Q 012797 124 SVGDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWT--HNRRIACVLYVND 176 (456)
Q Consensus 124 ~~~~~t~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~T--~~~~~~d~F~v~~ 176 (456)
..+..+.+.+.-.|+||.+..|+..|.++|+||.+.++.. .++.+.-++.+..
T Consensus 450 ~~~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~ 504 (529)
T 1ygy_A 450 LRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQ 504 (529)
T ss_dssp EESCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESS
T ss_pred ecCCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECC
Confidence 3456788889999999999999999999999999999987 4556665665544
No 57
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=90.77 E-value=0.41 Score=48.44 Aligned_cols=47 Identities=21% Similarity=0.371 Sum_probs=40.1
Q ss_pred ceEEEEEeCCCcchHHHHHHHHHHCCceEEEEEEeecCceeeeEEEE
Q 012797 346 GLSLELCAKDRVGLLSEVTRILRENGLSVTRAGVSTVGEQAVNVFYV 392 (456)
Q Consensus 346 ~~~lev~~~DrpGlL~~It~~l~~~gi~I~~a~i~T~g~~~~d~F~v 392 (456)
...|-+.-.|+||.+..|+.+|.++|+||......+.|+.+-=++-+
T Consensus 331 ~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidv 377 (404)
T 1sc6_A 331 GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 377 (404)
T ss_dssp SEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEE
T ss_pred cceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEc
Confidence 35677888999999999999999999999999999977766555545
No 58
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=90.02 E-value=3.4 Score=42.22 Aligned_cols=120 Identities=15% Similarity=0.212 Sum_probs=73.7
Q ss_pred eEEEEEEe---cCCcchHHHHHHHHhhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCCCC
Q 012797 35 CTVVKVDS---VNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHITAG 111 (456)
Q Consensus 35 ~~~V~V~~---~DrpGLl~~i~~vL~~~glnI~~A~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~l~~~~~ 111 (456)
.+.|+|.+ ++.||.++++..+|+++|++|.-- .+ +...+ .|.|...+-.. ......++|+..+...
T Consensus 298 ~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i--~~-~~~~i-s~~V~~~d~~~-~~~~~~~el~~~~~~~------ 366 (446)
T 3tvi_A 298 FTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHM--PS-GVDSV-SLVIEDCKLDG-KCDKIIEEIKKQCNPD------ 366 (446)
T ss_dssp EEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEB--CE-ETTEE-EEEEEHHHHTT-THHHHHHHHHHHSCCS------
T ss_pred EEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEE--ec-CCCEE-EEEEecchHHH-HHHHHHHHHHHhcCCC------
Confidence 44677775 689999999999999999999632 22 22122 36665321110 0112333444333210
Q ss_pred cccCCcccccccCCCceEEEEEEeC---CcccHHHHHHHHHHhCCceEEEEEEecCCceeEEEEEEEe
Q 012797 112 AKTWPSKQVGVHSVGDHTAIELIGR---DRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVND 176 (456)
Q Consensus 112 ~~~~~~~~v~~~~~~~~t~i~v~~~---DrpGLL~~I~~~l~~~gi~I~~a~i~T~~~~~~d~F~v~~ 176 (456)
.+ .-..+...|.|.|. ++||+.+++..+|++.|+||......|..- .-.|.|..
T Consensus 367 -------~v--~v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqgtSei--~Is~vV~~ 423 (446)
T 3tvi_A 367 -------SI--EIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGSSEI--NVIVGVET 423 (446)
T ss_dssp -------EE--EEEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEECSCTT--EEEEEEEG
T ss_pred -------cE--EEeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEecCCCc--eEEEEEcH
Confidence 11 11235778899876 589999999999999999998766443322 23355544
No 59
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=88.11 E-value=1.8 Score=41.50 Aligned_cols=64 Identities=16% Similarity=0.160 Sum_probs=49.3
Q ss_pred ceEEEEEEeCCcccHHHHHHHHHHhCCceEEEEEEec-CCceeEEEEEEEeCCCCCcCCChHHHHHHHHHHH
Q 012797 127 DHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWT-HNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLK 197 (456)
Q Consensus 127 ~~t~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~T-~~~~~~d~F~v~~~~~g~~l~d~~~~~~l~~~L~ 197 (456)
..|.|-+..+|+||-|+++-..|+.+|+|+....... .+....-+|||.-. |+.- | ..++++|.
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~e--g~~~-d----~~v~~aL~ 263 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADFI--GHRE-D----QNVHNALE 263 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEEE--SCTT-S----HHHHHHHH
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEEe--cCCC-c----HHHHHHHH
Confidence 4677777888999999999999999999999998876 45557888999773 5442 3 34555554
No 60
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=86.48 E-value=2.5 Score=41.08 Aligned_cols=55 Identities=24% Similarity=0.230 Sum_probs=44.6
Q ss_pred CceEEEEEEeC-CcccHHHHHHHHHHhCCceEEEEEEec-CCceeEEEEEEEeCCCCCc
Q 012797 126 GDHTAIELIGR-DRPGLLSEISAVLANLRFNVAAAEVWT-HNRRIACVLYVNDDTTCRA 182 (456)
Q Consensus 126 ~~~t~i~v~~~-DrpGLL~~I~~~l~~~gi~I~~a~i~T-~~~~~~d~F~v~~~~~g~~ 182 (456)
...|.|-+..+ |+||-|+++-..|+.+|+|+....... .++...=+|||.-. |+.
T Consensus 199 ~~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e--g~~ 255 (313)
T 3mwb_A 199 ADKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDAD--GHA 255 (313)
T ss_dssp SEEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEEE--SCT
T ss_pred CCeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEEe--CCC
Confidence 35788888885 999999999999999999999988876 45556778998763 543
No 61
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=86.13 E-value=2 Score=37.11 Aligned_cols=108 Identities=19% Similarity=0.214 Sum_probs=64.8
Q ss_pred CeEEEEEEe---eCchhHHHHHHHHHHhCCcEEEEEEEEecCCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhhc-
Q 012797 267 GYSVVNVKC---RDRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRRR- 342 (456)
Q Consensus 267 ~~~~v~V~~---~Dr~gll~~i~~~L~~~~l~I~~a~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l~~r- 342 (456)
+...|+|.+ +++||..+++...|+++|+||.-.. .... --.|.|.+.+ ..+++.+.|.+ + ..
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~---~s~~-~Isf~v~~~~--------~~~~il~~l~~-~-~~v 82 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA---TSEV-GVSLTIDNDK--------NLPDIVRALSD-I-GDV 82 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE---CCSS-EEEEEESCCT--------THHHHHHHHTT-T-EEE
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE---ecCC-EEEEEECChH--------HHHHHHHHHhc-c-CeE
Confidence 456788874 5789999999999999999985433 2222 2246663211 12233333322 1 11
Q ss_pred --CCCceEEEEEeC---CCcchHHHHHHHHHHCCceEEEEEEeecCceeee-EEEEE
Q 012797 343 --VSEGLSLELCAK---DRVGLLSEVTRILRENGLSVTRAGVSTVGEQAVN-VFYVR 393 (456)
Q Consensus 343 --~~~~~~lev~~~---DrpGlL~~It~~l~~~gi~I~~a~i~T~g~~~~d-~F~v~ 393 (456)
......|.|.|. ++||+.+++..+|+ |++|.... +|..... .|.|.
T Consensus 83 ~~~~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~is---qg~Se~~is~vv~ 134 (157)
T 3mah_A 83 TVDKDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMIS---YGGSNYNVSVLVK 134 (157)
T ss_dssp EEEEEEEEEEEEC------CCHHHHHHHTTT--TSCCSEEE---ECSSSSCEEEEEE
T ss_pred EEeCCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEe---eCCCCCEEEEEEc
Confidence 113356777765 68999999999999 99988753 3433333 45553
No 62
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=86.09 E-value=2.7 Score=39.86 Aligned_cols=51 Identities=20% Similarity=0.322 Sum_probs=43.0
Q ss_pred CceEEEEEEe---CCcccHHHHHHHHHHhCCceEEEEEEec-CCceeEEEEEEEe
Q 012797 126 GDHTAIELIG---RDRPGLLSEISAVLANLRFNVAAAEVWT-HNRRIACVLYVND 176 (456)
Q Consensus 126 ~~~t~i~v~~---~DrpGLL~~I~~~l~~~gi~I~~a~i~T-~~~~~~d~F~v~~ 176 (456)
...|.|-+.. .|+||-|+++-..|+.+|+|+....... .+....-+|||.-
T Consensus 184 ~~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~ 238 (267)
T 2qmw_A 184 QNATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQA 238 (267)
T ss_dssp SSCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEE
T ss_pred CCeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEE
Confidence 4567777777 8999999999999999999999998876 4455778899977
No 63
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=85.52 E-value=3.9 Score=41.36 Aligned_cols=50 Identities=20% Similarity=0.270 Sum_probs=44.9
Q ss_pred CceEEEEEEeCCcccHHHHHHHHHHhCCceEEEEEEecCCceeEEEEEEE
Q 012797 126 GDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVN 175 (456)
Q Consensus 126 ~~~t~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~T~~~~~~d~F~v~ 175 (456)
+....|.+.-.|.||.|..|+.+|+++|+||......|.|+-+.-+.-+.
T Consensus 341 ~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~~ 390 (416)
T 3k5p_A 341 PTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEAD 390 (416)
T ss_dssp SSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEEC
T ss_pred CCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEec
Confidence 45789999999999999999999999999999999999998877666665
No 64
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=85.46 E-value=5.3 Score=39.04 Aligned_cols=53 Identities=15% Similarity=0.186 Sum_probs=41.0
Q ss_pred eEEEEEEeC--CcccHHHHHHHHHHhCCceEEEEEEec-CCceeEEEEEEEeCCCCCc
Q 012797 128 HTAIELIGR--DRPGLLSEISAVLANLRFNVAAAEVWT-HNRRIACVLYVNDDTTCRA 182 (456)
Q Consensus 128 ~t~i~v~~~--DrpGLL~~I~~~l~~~gi~I~~a~i~T-~~~~~~d~F~v~~~~~g~~ 182 (456)
.+.+.+... |+||-|+++-..|+.+|+|+....... .+....=+|||.-. |+.
T Consensus 206 kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e--g~~ 261 (329)
T 3luy_A 206 YESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTLD--AAP 261 (329)
T ss_dssp EEEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEEES--SCT
T ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEEEe--CCc
Confidence 344444444 799999999999999999999988876 55557778998773 544
No 65
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=83.59 E-value=4.3 Score=34.92 Aligned_cols=113 Identities=18% Similarity=0.140 Sum_probs=68.2
Q ss_pred CeEEEEEEe---cCCcchHHHHHHHHhhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCCC
Q 012797 34 ECTVVKVDS---VNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHITA 110 (456)
Q Consensus 34 ~~~~V~V~~---~DrpGLl~~i~~vL~~~glnI~~A~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~l~~~~ 110 (456)
+...|+|.+ ++.||..+++.+.|+++|+||.--. + +... -.|.|.+. . ...++.+.|... .
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~--~-s~~~-Isf~v~~~--~------~~~~il~~l~~~-~--- 80 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA--T-SEVG-VSLTIDND--K------NLPDIVRALSDI-G--- 80 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE--C-CSSE-EEEEESCC--T------THHHHHHHHTTT-E---
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE--e-cCCE-EEEEECCh--H------HHHHHHHHHhcc-C---
Confidence 567888874 5789999999999999999985322 2 2221 23556421 1 123333344331 0
Q ss_pred CcccCCcccccccCCCceEEEEEEeC---CcccHHHHHHHHHHhCCceEEEEEEecCCceeEEEEEEEe
Q 012797 111 GAKTWPSKQVGVHSVGDHTAIELIGR---DRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVND 176 (456)
Q Consensus 111 ~~~~~~~~~v~~~~~~~~t~i~v~~~---DrpGLL~~I~~~l~~~gi~I~~a~i~T~~~~~~d~F~v~~ 176 (456)
.+ .-..+...+.+.|. ++||+.+++..+|+ |+||......+.. ..-.|.|..
T Consensus 81 --------~v--~~~~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~isqg~Se--~~is~vv~~ 135 (157)
T 3mah_A 81 --------DV--TVDKDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMISYGGSN--YNVSVLVKA 135 (157)
T ss_dssp --------EE--EEEEEEEEEEEEC------CCHHHHHHHTTT--TSCCSEEEECSSS--SCEEEEEEG
T ss_pred --------eE--EEeCCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEeeCCCC--CEEEEEEcH
Confidence 01 11235678888875 68999999999999 9998776543332 233455544
No 66
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=83.21 E-value=0.98 Score=46.19 Aligned_cols=34 Identities=35% Similarity=0.505 Sum_probs=30.0
Q ss_pred ceEEEEEeCCCcchHHHHHHHHHHCCceEEEEEE
Q 012797 346 GLSLELCAKDRVGLLSEVTRILRENGLSVTRAGV 379 (456)
Q Consensus 346 ~~~lev~~~DrpGlL~~It~~l~~~gi~I~~a~i 379 (456)
.|-+.+...|+||+|.+|+.+|.++||+|.+..=
T Consensus 359 ~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q 392 (444)
T 3mtj_A 359 AYYLRLRAFDRPGVLADITRILADSSISIDAMVQ 392 (444)
T ss_dssp EEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred eeEEEEEecCcccHHHHHHHHHHhcCCceeEEee
Confidence 4678999999999999999999999999998753
No 67
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=82.72 E-value=2.9 Score=42.69 Aligned_cols=51 Identities=20% Similarity=0.307 Sum_probs=37.9
Q ss_pred CceEEEEEEeCCcccHHHHHHHHHHhCCceEEEEEEecC--CceeEEEEEEEe
Q 012797 126 GDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTH--NRRIACVLYVND 176 (456)
Q Consensus 126 ~~~t~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~T~--~~~~~d~F~v~~ 176 (456)
...+-+.+...|+||.|+.|+++|.++|++|.+....-. ++....+..+|.
T Consensus 357 ~~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th 409 (444)
T 3mtj_A 357 RTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTH 409 (444)
T ss_dssp EEEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEEC
T ss_pred ceeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEec
Confidence 457788889999999999999999999999999876542 122345666665
No 68
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=80.87 E-value=2.8 Score=43.59 Aligned_cols=117 Identities=15% Similarity=0.210 Sum_probs=73.4
Q ss_pred CeEEEEEEe---eCchhHHHHHHHHHHhCCcEEEEEEEEecCCceEEEEEEEccCCCCCC-CHHHHHHHHHHHHHHHhhc
Q 012797 267 GYSVVNVKC---RDRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILD-TEGEKERVIKCLEAAIRRR 342 (456)
Q Consensus 267 ~~~~v~V~~---~Dr~gll~~i~~~L~~~~l~I~~a~i~t~~g~~~d~f~V~~~~g~~~~-~~~~~~~l~~~L~~~l~~r 342 (456)
+.+.|+|.+ ++++|.++++..+|+++|++|..-. +. . .--.|.|...+..... ..+.++++.+.|.. + ..
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~--ss-e-~sis~~v~~~~~~~~~~~~~~l~~~~~el~~-~-~~ 413 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVA--TS-E-VSISLTLDPSKLWSRELIQQELDHVVEELEK-I-AV 413 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEE--EE-T-TEEEEEECCGGGSSSCCCHHHHHHHHHHHTT-T-SE
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEE--eC-C-CeEEEEEechHhhhhhHHHHHHHHHHHHhCC-C-Ce
Confidence 567889986 6799999999999999999998763 21 1 1223666432211100 12233333333321 0 01
Q ss_pred ---CCCceEEEEEeC--CCcchHHHHHHHHHHCCceEEEEEEeecCceeee-EEEE
Q 012797 343 ---VSEGLSLELCAK--DRVGLLSEVTRILRENGLSVTRAGVSTVGEQAVN-VFYV 392 (456)
Q Consensus 343 ---~~~~~~lev~~~--DrpGlL~~It~~l~~~gi~I~~a~i~T~g~~~~d-~F~v 392 (456)
..+-..|.|.|. .+||+.+++..+|.+.||||... ++|..... .|.|
T Consensus 414 v~~~~~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mI---sqGsSei~Is~vV 466 (510)
T 2cdq_A 414 VNLLKGRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMI---SQGASKVNISFIV 466 (510)
T ss_dssp EEEEEEEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEE---EECTTCSEEEEEE
T ss_pred EEEeCCcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEE---EecCCcceEEEEE
Confidence 113456777777 78899999999999999999876 34544444 4555
No 69
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=80.51 E-value=22 Score=36.84 Aligned_cols=138 Identities=14% Similarity=0.155 Sum_probs=83.0
Q ss_pred CeEEEEEEe---cCCcchHHHHHHHHhhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCC-ChhHHHHHHHHHCCCCCCC
Q 012797 34 ECTVVKVDS---VNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKIT-DGKTIDYIEKALGPKGHIT 109 (456)
Q Consensus 34 ~~~~V~V~~---~DrpGLl~~i~~vL~~~glnI~~A~i~t~~g~~~d~f~V~~~~g~~~~-~~~~~~~L~~~L~~~l~~~ 109 (456)
+.+.|+|.+ +++||.++++..+|+++|+||.--. + +...+ .|.|...+..... ..+.++.+.+.|... .
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~--s-se~si-s~~v~~~~~~~~~~~~~~l~~~~~el~~~-~-- 412 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVA--T-SEVSI-SLTLDPSKLWSRELIQQELDHVVEELEKI-A-- 412 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEE--E-ETTEE-EEEECCGGGSSSCCCHHHHHHHHHHHTTT-S--
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEE--e-CCCeE-EEEEechHhhhhhHHHHHHHHHHHHhCCC-C--
Confidence 445677875 6799999999999999999998552 2 12222 3555432111100 123445555555431 1
Q ss_pred CCcccCCcccccccCCCceEEEEEEeC--CcccHHHHHHHHHHhCCceEEEEEEecCCceeEEEEEEEeCCCCCcCCChH
Q 012797 110 AGAKTWPSKQVGVHSVGDHTAIELIGR--DRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQT 187 (456)
Q Consensus 110 ~~~~~~~~~~v~~~~~~~~t~i~v~~~--DrpGLL~~I~~~l~~~gi~I~~a~i~T~~~~~~d~F~v~~~~~g~~l~d~~ 187 (456)
... -..+...|.|.|. .+||+.+++..+|++.|+||.-....+ ....-.|.|.. +
T Consensus 413 -------~v~----~~~~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIsqGs--Sei~Is~vV~~----------~ 469 (510)
T 2cdq_A 413 -------VVN----LLKGRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMISQGA--SKVNISFIVNE----------A 469 (510)
T ss_dssp -------EEE----EEEEEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEEECT--TCSEEEEEEEH----------H
T ss_pred -------eEE----EeCCcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEEecC--CcceEEEEEeH----------H
Confidence 011 1235778888887 788999999999999999998664322 22333355544 2
Q ss_pred HHHHHHHHHHHHhc
Q 012797 188 RLSLMEEQLKNILR 201 (456)
Q Consensus 188 ~~~~l~~~L~~~L~ 201 (456)
..++.-++|++.+-
T Consensus 470 d~~~Av~aLH~~f~ 483 (510)
T 2cdq_A 470 EAEGCVQALHKSFF 483 (510)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 33444455555554
No 70
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=80.39 E-value=6.9 Score=39.53 Aligned_cols=49 Identities=6% Similarity=0.019 Sum_probs=42.0
Q ss_pred CCeEEEEEEeeCchhHHHHHHHHHHhCCcEEEEEEEEecCCceEEEEEE
Q 012797 266 KGYSVVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYI 314 (456)
Q Consensus 266 ~~~~~v~V~~~Dr~gll~~i~~~L~~~~l~I~~a~i~t~~g~~~d~f~V 314 (456)
.+...|.+.=+|+||.+.+|..+|+++|+||.+-...|.+++.+.+.-|
T Consensus 341 ~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~ 389 (416)
T 3k5p_A 341 PTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 389 (416)
T ss_dssp SSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEE
T ss_pred CCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEe
Confidence 3567899999999999999999999999999998888888877544333
No 71
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=76.47 E-value=3 Score=42.15 Aligned_cols=68 Identities=19% Similarity=0.298 Sum_probs=48.6
Q ss_pred CceEEEEEeCCCcchHHHHHHHHHHCCceEEEEEEeecCce-eeeEEEEEeCCCCCCChHHHHHHHHHHHHh
Q 012797 345 EGLSLELCAKDRVGLLSEVTRILRENGLSVTRAGVSTVGEQ-AVNVFYVRDASGNPVDMKTIEALRKEIGHT 415 (456)
Q Consensus 345 ~~~~lev~~~DrpGlL~~It~~l~~~gi~I~~a~i~T~g~~-~~d~F~v~d~~g~~l~~~~~~~L~~~l~~~ 415 (456)
..|.|-+...|+||-|+++-..|+.+|||+.+.+..-.... .+=.||| |.+ .. .+..++++-++|...
T Consensus 33 dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfV-D~e-h~-~d~~v~~AL~eL~~~ 101 (429)
T 1phz_A 33 GAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFT-YLD-KR-TKPVLGSIIKSLRND 101 (429)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEE-CBC-GG-GHHHHHHHHHHHHHT
T ss_pred CeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEE-EEe-eC-CCHHHHHHHHHHHhh
Confidence 35667777789999999999999999999999888766544 4557888 554 22 333444444555544
No 72
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=58.66 E-value=8.4 Score=38.88 Aligned_cols=52 Identities=8% Similarity=0.098 Sum_probs=42.8
Q ss_pred CCceEEEEEEeCCcccHHHHHHHHHHhCCceEEEEEEec-CCceeEEEEEEEe
Q 012797 125 VGDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWT-HNRRIACVLYVND 176 (456)
Q Consensus 125 ~~~~t~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~T-~~~~~~d~F~v~~ 176 (456)
....|.|-+..+|+||-|+++-..|+.+|+|+....... .+....=.|+|.-
T Consensus 31 g~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~ 83 (429)
T 1phz_A 31 QNGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYL 83 (429)
T ss_dssp SSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECB
T ss_pred CCCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEE
Confidence 345777888889999999999999999999999888765 4445677888865
No 73
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=48.16 E-value=79 Score=27.29 Aligned_cols=93 Identities=10% Similarity=0.111 Sum_probs=60.8
Q ss_pred HHHHHHHHHHhCCcEEEEEEEEecCC-ceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhh----cCCCceEEEEEeCC
Q 012797 281 LMFDIVCTLTDMQYVVFHAAISSDGP-HASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRR----RVSEGLSLELCAKD 355 (456)
Q Consensus 281 ll~~i~~~L~~~~l~I~~a~i~t~~g-~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l~~----r~~~~~~lev~~~D 355 (456)
+-.-+..++.. |+.+.+..+...++ +.+. .++....|- +-+.++.+-+.|.+.|.+ ..+..|.|||+++.
T Consensus 14 v~~li~p~~~~-g~eLvdve~~~~g~~~~Lr-V~ID~~~gi---~lddC~~vSr~is~~LD~~~~d~i~~~Y~LEVSSPG 88 (164)
T 1ib8_A 14 VREVVEPVIEA-PFELVDIEYGKIGSDMILS-IFVDKPEGI---TLNDTADLTEMISPVLDTIKPDPFPEQYFLEITSPG 88 (164)
T ss_dssp HHHHHHHHHCS-SSEEEEEEEEEETTEEEEE-EEEECSSCC---CHHHHHHHHHHHGGGTTTCCSCCCCSCEEEEEECCS
T ss_pred HHHHHHHHHcC-CcEEEEEEEEecCCCcEEE-EEEECCCCC---CHHHHHHHHHHHHHHhccccccCCCCCeEEEEeCCC
Confidence 44455566777 99999999987654 4553 445333442 336788888888888872 23578999999884
Q ss_pred CcchHHHHHHHHHHCCceEEEEEEee
Q 012797 356 RVGLLSEVTRILRENGLSVTRAGVST 381 (456)
Q Consensus 356 rpGlL~~It~~l~~~gi~I~~a~i~T 381 (456)
--.-|..--.+-.-.|-.| +|.+
T Consensus 89 ldRpL~~~~df~r~~G~~V---~V~l 111 (164)
T 1ib8_A 89 LERPLKTKDAVAGAVGKYI---HVGL 111 (164)
T ss_dssp SSSCCSSHHHHHHHCSEEE---EEEC
T ss_pred CCCCCCCHHHHHHhCCcEE---EEEE
Confidence 4444555555556666443 4555
No 74
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=40.69 E-value=1.3e+02 Score=24.08 Aligned_cols=62 Identities=18% Similarity=0.065 Sum_probs=43.6
Q ss_pred eEEEEEEeeCchhHHHHHHHHHHhC---CcEEEEEEEEecCCceEEEEEEEccCCCCCCCHHHHHHHHHHHH
Q 012797 268 YSVVNVKCRDRAKLMFDIVCTLTDM---QYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLE 336 (456)
Q Consensus 268 ~~~v~V~~~Dr~gll~~i~~~L~~~---~l~I~~a~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~ 336 (456)
.+.+.|.|++.+++...|..++..+ +..+ ..+-++.|.|..-...| ...+.+.+..|-++|.
T Consensus 36 ~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~Ss~GkY~Svtv~v------~v~S~eQv~aiY~~L~ 100 (109)
T 1rwu_A 36 PFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKPSSKGNYHSVSITI------NATHIEQVETLYEELG 100 (109)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEESSCSSEEEEEEEE------CCSSHHHHHHHHHHHS
T ss_pred CceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecCCCCCeEEEEEEEE------EECCHHHHHHHHHHHh
Confidence 4678999999999999999999988 7777 33444445565544444 2455667777766663
No 75
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=38.42 E-value=1.4e+02 Score=30.78 Aligned_cols=134 Identities=17% Similarity=0.144 Sum_probs=80.2
Q ss_pred EEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCC----CCC-
Q 012797 36 TVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGH----ITA- 110 (456)
Q Consensus 36 ~~V~V~~~DrpGLl~~i~~vL~~~glnI~~A~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~l~----~~~- 110 (456)
..+.|.-|||||-|.+++.+|. +-||.+-.-...+.....++....-.+. .+..+.|.++|...-- ...
T Consensus 339 ~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~l~~~g~~~~~~~~~ 412 (514)
T 1tdj_A 339 ALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRFADAKNACIFVGVRLSRG----LEERKEILQMLNDGGYSVVDLSDD 412 (514)
T ss_dssp EEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEECCCSSBCEEEEEEECSST----HHHHHHHHHHHTSSSCEEETTSSC
T ss_pred ccccccCCCCCchHHHHHHHhC--CCceEEEEeeccCCCeEEEEEEEEeCCc----HHHHHHHHHHHHhCCCCeEECCCC
Confidence 5677889999999999999888 6888765543222112223333332221 3577888888876411 110
Q ss_pred -CcccCCccccccc-C-CCceEEEEEEeCCcccHHHHHHHHHHhCCceEEEEEEecCC---ceeEEEEEEEe
Q 012797 111 -GAKTWPSKQVGVH-S-VGDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHN---RRIACVLYVND 176 (456)
Q Consensus 111 -~~~~~~~~~v~~~-~-~~~~t~i~v~~~DrpGLL~~I~~~l~~~gi~I~~a~i~T~~---~~~~d~F~v~~ 176 (456)
..+.+.+-.|--. + -.+..+..+.=+.|||-|.+.-..|.. +.||.-.+-.-+| +++.-=|.+..
T Consensus 413 ~~~~~h~~~~~g~~~~~~~~e~~~~~~fpe~~gal~~fl~~~~~-~~~i~~~~yr~~g~~~~~~~~~~~~~~ 483 (514)
T 1tdj_A 413 EMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGT-YWNISLFHYRSHGTDYGRVLAAFELGD 483 (514)
T ss_dssp HHHHHTGGGTCCCCCSSCCCCEEEEEECCCCTTHHHHHHHHHCS-CCCCCEEECBCTTTCSSCEEEEEC---
T ss_pred HHHHHHHHHhhCCcCccCCCceEEEEeCCCCCCHHHHHHHhcCC-CceEEEEeecCCCCCcccEEEEEEcCC
Confidence 0000111111111 1 235667888899999999999998875 6888877776665 44555555544
No 76
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=35.66 E-value=1.1e+02 Score=24.27 Aligned_cols=49 Identities=18% Similarity=0.103 Sum_probs=36.0
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCce-EEEEEEEEeCCEEEEEEEEEeCCCCCC
Q 012797 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLI-ITKAYISSDGGWFMDVFHVIDQQGKKI 89 (456)
Q Consensus 34 ~~~~V~V~~~DrpGLl~~i~~vL~~~gln-I~~A~i~t~~g~~~d~f~V~~~~g~~~ 89 (456)
+...+.+.+.| +..+...|.+.|+. +...-.....|.. +++.||+|+.+
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~~---~~~~DPdGn~i 115 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGKK---AIVLDPDGHSI 115 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CEE---EEEECTTCCEE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCccE---EEEECCCCCEE
Confidence 45678888888 88888999999999 7754433344543 78999999854
No 77
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=35.17 E-value=19 Score=36.62 Aligned_cols=118 Identities=13% Similarity=0.103 Sum_probs=72.5
Q ss_pred CeEEEEEEe---eCchhHHHHHHHHHHhCCcEEEEEEEEecCCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhhc-
Q 012797 267 GYSVVNVKC---RDRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRRR- 342 (456)
Q Consensus 267 ~~~~v~V~~---~Dr~gll~~i~~~L~~~~l~I~~a~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l~~r- 342 (456)
+.+.|+|.+ .+.+|..+++..+|+++|++|..-.. +.. --.|.|...+...-......+++...|...-.-.
T Consensus 307 ~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i~s---s~~-sis~~v~~~~~~~~~~~~~~~~~~~el~~~~~v~~ 382 (449)
T 2j0w_A 307 NQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLITT---SEV-SVALTLDTTGSTSTGDTLLTQSLLMELSALCRVEV 382 (449)
T ss_dssp EEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEEE---ETT-EEEEEECCCCCSSTTCCSSCHHHHHHHHHHSCEEE
T ss_pred CEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEEEe---CCC-eEEEEEeccccchhhHHHHHHHHHHHhccCCeEEE
Confidence 567888887 47889999999999999999876552 122 2246664432211001123455555555310000
Q ss_pred CCCceEEEEEeC---CCcchHHHHHHHHHHCCceEEEEEEeecCceeee-EEEEE
Q 012797 343 VSEGLSLELCAK---DRVGLLSEVTRILRENGLSVTRAGVSTVGEQAVN-VFYVR 393 (456)
Q Consensus 343 ~~~~~~lev~~~---DrpGlL~~It~~l~~~gi~I~~a~i~T~g~~~~d-~F~v~ 393 (456)
..+-..|.|.|. ..||+.+++..+|.+ +||... ++|..... .|.|.
T Consensus 383 ~~~~a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~mI---sqg~Se~~Is~vV~ 432 (449)
T 2j0w_A 383 EEGLALVALIGNDLSKACGVGKEVFGVLEP--FNIRMI---CYGASSHNLCFLVP 432 (449)
T ss_dssp EEEEEEEEEEESSCTTSSSHHHHHHSSCTT--SCCCEE---EESSCTTEEEEEEE
T ss_pred eCCeEEEEEECCCccccccHHHHHHHHHhC--CCeEEE---EecCCCcEEEEEEe
Confidence 123456888887 589999999999966 777644 45555444 45553
No 78
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=34.16 E-value=91 Score=32.15 Aligned_cols=113 Identities=9% Similarity=0.039 Sum_probs=76.9
Q ss_pred EEEEEEeeCchhHHHHHHHHHHhCCcEEEEEEEEecCCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHH------Hh--
Q 012797 269 SVVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAA------IR-- 340 (456)
Q Consensus 269 ~~v~V~~~Dr~gll~~i~~~L~~~~l~I~~a~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~------l~-- 340 (456)
..+.|.-|||||-|.+++..|. +-||.+..-...+.....++......+. .+..+.|.+.|++. +.
T Consensus 339 ~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~l~~~g~~~~~~~~~ 412 (514)
T 1tdj_A 339 ALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRFADAKNACIFVGVRLSRG----LEERKEILQMLNDGGYSVVDLSDD 412 (514)
T ss_dssp EEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEECCCSSBCEEEEEEECSST----HHHHHHHHHHHTSSSCEEETTSSC
T ss_pred ccccccCCCCCchHHHHHHHhC--CCceEEEEeeccCCCeEEEEEEEEeCCc----HHHHHHHHHHHHhCCCCeEECCCC
Confidence 4577889999999999999988 6888876654333223333443332221 36778888887643 10
Q ss_pred ------------hcC---CCceEEEEEeCCCcchHHHHHHHHHHCCceEEEEEEeecCceeee
Q 012797 341 ------------RRV---SEGLSLELCAKDRVGLLSEVTRILRENGLSVTRAGVSTVGEQAVN 388 (456)
Q Consensus 341 ------------~r~---~~~~~lev~~~DrpGlL~~It~~l~~~gi~I~~a~i~T~g~~~~d 388 (456)
.|. ++.-+....=+.|||-|.+.-..|.. +-||.-.+-..+|...-.
T Consensus 413 ~~~~~h~~~~~g~~~~~~~~e~~~~~~fpe~~gal~~fl~~~~~-~~~i~~~~yr~~g~~~~~ 474 (514)
T 1tdj_A 413 EMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGT-YWNISLFHYRSHGTDYGR 474 (514)
T ss_dssp HHHHHTGGGTCCCCCSSCCCCEEEEEECCCCTTHHHHHHHHHCS-CCCCCEEECBCTTTCSSC
T ss_pred HHHHHHHHHhhCCcCccCCCceEEEEeCCCCCCHHHHHHHhcCC-CceEEEEeecCCCCCccc
Confidence 011 24456888899999999999998875 678888888888865333
No 79
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=27.79 E-value=1.3e+02 Score=23.72 Aligned_cols=49 Identities=10% Similarity=0.038 Sum_probs=34.7
Q ss_pred CeEEEEEEeeCchhHHHHHHHHHHhCCcE-EEEEEEEecCCceEEEEEEEccCCCCC
Q 012797 267 GYSVVNVKCRDRAKLMFDIVCTLTDMQYV-VFHAAISSDGPHASQEYYIRHMDGCIL 322 (456)
Q Consensus 267 ~~~~v~V~~~Dr~gll~~i~~~L~~~~l~-I~~a~i~t~~g~~~d~f~V~~~~g~~~ 322 (456)
++..+.+.+.| +..+...|...|+. +...-.....|.. +++.|++|..+
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~~---~~~~DPdGn~i 115 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGKK---AIVLDPDGHSI 115 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CEE---EEEECTTCCEE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCccE---EEEECCCCCEE
Confidence 44567778888 88889999999999 7653332223332 78999999864
No 80
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=26.64 E-value=48 Score=27.76 Aligned_cols=50 Identities=22% Similarity=0.282 Sum_probs=33.3
Q ss_pred CCCcchHHHHHHHHHHCCceEEEEEEeecCceeeeEEEEEeCCCCCCChHHHHHHHHHHHHhh
Q 012797 354 KDRVGLLSEVTRILRENGLSVTRAGVSTVGEQAVNVFYVRDASGNPVDMKTIEALRKEIGHTM 416 (456)
Q Consensus 354 ~DrpGlL~~It~~l~~~gi~I~~a~i~T~g~~~~d~F~v~d~~g~~l~~~~~~~L~~~l~~~~ 416 (456)
-|-.|+++.|+..|++.||+|... +|+- .|-.+|. .+..++..+.|.+..
T Consensus 73 ~~~vGilA~is~pLA~agIsif~i--Sty~---tD~IlVp--------~~~~~~Ai~aL~~~~ 122 (134)
T 1zhv_A 73 FDETGIVLSVISPLSTNGIGIFVV--STFD---GDHLLVR--------SNDLEKTADLLANAG 122 (134)
T ss_dssp CSSCCHHHHHHHHHHTTTCCCEEE--ECSS---CEEEEEE--------GGGHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHhCCCCeEEE--Eecc---ccEEEEe--------HHHHHHHHHHHHHcC
Confidence 488899999999999999999764 4443 3444452 123445555555543
No 81
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=25.86 E-value=2.5e+02 Score=22.37 Aligned_cols=63 Identities=11% Similarity=0.230 Sum_probs=45.8
Q ss_pred CceEEEEEEeCCcccHHHHHHHHHHhC---CceEEEEEEecCCceeEEEEEEEeCCCCCcCCChHHHHHHHHHH
Q 012797 126 GDHTAIELIGRDRPGLLSEISAVLANL---RFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQL 196 (456)
Q Consensus 126 ~~~t~i~v~~~DrpGLL~~I~~~l~~~---gi~I~~a~i~T~~~~~~d~F~v~~~~~g~~l~d~~~~~~l~~~L 196 (456)
|..+.+.|.+.+.+++...|..++..+ +..+ ..+-+..|....-.+.+.-. +.+++..|-++|
T Consensus 34 Pc~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~Ss~GkY~Svtv~v~v~-------S~eQv~aiY~~L 99 (109)
T 1rwu_A 34 PTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKPSSKGNYHSVSITINAT-------HIEQVETLYEEL 99 (109)
T ss_dssp CCCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEESSCSSEEEEEEEECCS-------SHHHHHHHHHHH
T ss_pred CCCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecCCCCCeEEEEEEEEEEC-------CHHHHHHHHHHH
Confidence 457999999999999999999999988 6777 44666667666655555442 356666665544
No 82
>1f59_C NSP1P, FXFG nucleoporin repeats; protein-protein complex, transport protein receptor; 2.80A {Saccharomyces cerevisiae} SCOP: j.70.1.1
Probab=23.57 E-value=25 Score=20.33 Aligned_cols=12 Identities=33% Similarity=0.631 Sum_probs=9.3
Q ss_pred CCcccchhhhhh
Q 012797 441 PKTSFFFGNLFE 452 (456)
Q Consensus 441 ~~~~~~~~~~~~ 452 (456)
.+|+||||....
T Consensus 4 skpafsfg~~~~ 15 (28)
T 1f59_C 4 SKPAFSFGXXXX 15 (28)
T ss_dssp CCCCCCSSSCCC
T ss_pred CCcccccccccc
Confidence 689999997643
No 83
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=23.33 E-value=68 Score=26.82 Aligned_cols=45 Identities=13% Similarity=0.238 Sum_probs=33.2
Q ss_pred ceEEEEEEeC---CcccHHHHHHHHHHhCCceEEEEEEecCCceeEEEEEEEe
Q 012797 127 DHTAIELIGR---DRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVND 176 (456)
Q Consensus 127 ~~t~i~v~~~---DrpGLL~~I~~~l~~~gi~I~~a~i~T~~~~~~d~F~v~~ 176 (456)
.+-.|+|.+. |-.|+++.|+..|++.||.|.-...+ -.|-.+|..
T Consensus 61 ~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~iSty-----~tD~IlVp~ 108 (134)
T 1zhv_A 61 GWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFVVSTF-----DGDHLLVRS 108 (134)
T ss_dssp EEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEEECS-----SCEEEEEEG
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEEEEec-----cccEEEEeH
Confidence 4566777655 88899999999999999999776533 344455543
No 84
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=20.58 E-value=64 Score=32.62 Aligned_cols=106 Identities=17% Similarity=0.199 Sum_probs=63.5
Q ss_pred CeEEEEEEe---cCCcchHHHHHHHHhhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCCC
Q 012797 34 ECTVVKVDS---VNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHITA 110 (456)
Q Consensus 34 ~~~~V~V~~---~DrpGLl~~i~~vL~~~glnI~~A~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~l~~~~ 110 (456)
+.+.|+|.+ ++.+|..+++..+|+++|++|.--. + ++..+ .|.|...+..........+++...|... .
T Consensus 307 ~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i~--s-s~~si-s~~v~~~~~~~~~~~~~~~~~~~el~~~-~--- 378 (449)
T 2j0w_A 307 NQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLIT--T-SEVSV-ALTLDTTGSTSTGDTLLTQSLLMELSAL-C--- 378 (449)
T ss_dssp EEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEE--E-ETTEE-EEEECCCCCSSTTCCSSCHHHHHHHHHH-S---
T ss_pred CEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEEE--e-CCCeE-EEEEeccccchhhHHHHHHHHHHHhccC-C---
Confidence 345666665 4678999999999999999987443 2 22222 3556432210000112334444444321 0
Q ss_pred CcccCCcccccccCCCceEEEEEEeC---CcccHHHHHHHHHHhCCceEEEE
Q 012797 111 GAKTWPSKQVGVHSVGDHTAIELIGR---DRPGLLSEISAVLANLRFNVAAA 159 (456)
Q Consensus 111 ~~~~~~~~~v~~~~~~~~t~i~v~~~---DrpGLL~~I~~~l~~~gi~I~~a 159 (456)
+. .-..+...|.|.|. .+||+.+++..+|++ +||.-.
T Consensus 379 ------~v----~~~~~~a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~mI 418 (449)
T 2j0w_A 379 ------RV----EVEEGLALVALIGNDLSKACGVGKEVFGVLEP--FNIRMI 418 (449)
T ss_dssp ------CE----EEEEEEEEEEEEESSCTTSSSHHHHHHSSCTT--SCCCEE
T ss_pred ------eE----EEeCCeEEEEEECCCccccccHHHHHHHHHhC--CCeEEE
Confidence 01 11235788899987 588999999999965 777644
No 85
>2qrr_A Methionine import ATP-binding protein METN; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 1.71A {Vibrio parahaemolyticus} SCOP: d.58.18.13
Probab=20.34 E-value=2.9e+02 Score=21.11 Aligned_cols=59 Identities=20% Similarity=0.212 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhCCcEEEEEEEEecCCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhhcCCCceEEEEEeCCCcchH
Q 012797 281 LMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLL 360 (456)
Q Consensus 281 ll~~i~~~L~~~~l~I~~a~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~l~~r~~~~~~lev~~~DrpGlL 360 (456)
+++++++.+ ...+||..+.|...+|..+-.+. +++.+.+.. +
T Consensus 39 vis~l~~~~-~v~vnIl~g~i~~i~~~~~G~L~-----------------------------------v~l~G~~~~--~ 80 (101)
T 2qrr_A 39 LMSQISRKY-NIDVSILSSDLDYAGGVKFGMMV-----------------------------------AELFGNEQD--D 80 (101)
T ss_dssp HHHHHHHHS-CCEEEEEEEEEEEETTEEEEEEE-----------------------------------EEEESCHHH--H
T ss_pred HHHHHHHHh-CCCEEEEEeeeeEcCCeeEEEEE-----------------------------------EEEeCCHHH--H
Q ss_pred HHHHHHHHHCCceEEEE
Q 012797 361 SEVTRILRENGLSVTRA 377 (456)
Q Consensus 361 ~~It~~l~~~gi~I~~a 377 (456)
.+....|.++|+.++..
T Consensus 81 ~~ai~~L~~~~v~vEvl 97 (101)
T 2qrr_A 81 SAAIEYLRENNVKVEVL 97 (101)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcCCEEEEe
No 86
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=20.09 E-value=2.9e+02 Score=21.09 Aligned_cols=56 Identities=14% Similarity=0.265 Sum_probs=41.5
Q ss_pred cchHHHHHHHHHHCCceEEEEEEeecCceeeeEEEEEeCCCCCCChHHHHHHHHHHHHhhh
Q 012797 357 VGLLSEVTRILRENGLSVTRAGVSTVGEQAVNVFYVRDASGNPVDMKTIEALRKEIGHTML 417 (456)
Q Consensus 357 pGlL~~It~~l~~~gi~I~~a~i~T~g~~~~d~F~v~d~~g~~l~~~~~~~L~~~l~~~~~ 417 (456)
.-+++++++.| ...+||..+.|...++.....+.+.-. |. +...++..+.|.+..+
T Consensus 37 ~pvis~l~~~~-~v~vnIl~g~i~~i~~~~~G~L~v~l~-G~---~~~~~~ai~~L~~~~v 92 (100)
T 2qsw_A 37 LPIISHIVQEY-QVEVSIIQGNIQQTKQGAVGSLYIQLL-GE---EQNILAAIEGLRKLRV 92 (100)
T ss_dssp SCHHHHHHHHH-TCEEEEEEEEEEEETTEEEEEEEEEEE-SC---HHHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHh-CCCEEEEEeeceEcCCeeEEEEEEEEE-CC---HHHHHHHHHHHHHcCC
Confidence 35778887777 477889999999999999998888543 42 3456667777766655
Done!