Your job contains 1 sequence.
>012799
MEIETETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISD
HELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDG
RQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQ
TGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHT
LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF
DHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQ
QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPS
NFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVT
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012799
(456 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2176897 - symbol:AT5G52820 "AT5G52820" species... 1810 1.8e-194 2
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 1261 1.7e-128 1
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 1256 5.9e-128 1
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 1255 7.6e-128 1
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 1254 9.6e-128 1
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 1247 5.3e-127 1
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 1223 1.9e-124 1
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 1220 3.9e-124 1
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 1208 7.2e-123 1
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 1132 8.2e-115 1
WB|WBGene00021074 - symbol:W07E6.2 species:6239 "Caenorha... 1053 1.9e-106 1
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 1033 2.5e-104 1
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 916 6.3e-92 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 908 4.5e-91 1
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 881 3.2e-88 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 456 7.9e-42 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 396 3.2e-35 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 364 2.0e-33 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 356 1.4e-32 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 337 1.4e-30 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 332 4.9e-30 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 329 1.0e-29 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 325 2.7e-29 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 325 2.7e-29 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 325 2.7e-29 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 325 2.7e-29 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 325 2.7e-29 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 325 2.7e-29 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 321 7.1e-29 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 305 4.4e-27 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 300 1.4e-25 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 292 1.5e-25 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 288 4.4e-25 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 288 4.4e-25 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 288 4.4e-25 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 306 5.5e-25 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 294 7.1e-25 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 285 9.6e-25 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 285 9.6e-25 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 284 1.3e-24 1
UNIPROTKB|G4MNI3 - symbol:MGG_05616 "Pre-mRNA-splicing fa... 299 2.4e-24 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 280 3.6e-24 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 290 5.4e-24 1
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 277 7.9e-24 1
ASPGD|ASPL0000046644 - symbol:AN2021 species:162425 "Emer... 302 9.1e-24 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 288 1.0e-23 1
UNIPROTKB|E1BVN5 - symbol:PLRG1 "Uncharacterized protein"... 288 2.1e-23 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 283 3.8e-23 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 284 4.3e-23 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 282 4.7e-23 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 267 1.1e-22 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 267 1.1e-22 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 267 1.1e-22 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 267 1.1e-22 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 280 1.3e-22 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 266 1.4e-22 1
UNIPROTKB|Q2KID6 - symbol:PLRG1 "Pleiotropic regulator 1"... 284 1.4e-22 2
MGI|MGI:1858197 - symbol:Plrg1 "pleiotropic regulator 1, ... 284 1.4e-22 2
UNIPROTKB|O43660 - symbol:PLRG1 "Pleiotropic regulator 1"... 284 1.4e-22 2
UNIPROTKB|E2QYT6 - symbol:PLRG1 "Uncharacterized protein"... 284 1.5e-22 2
POMBASE|SPBP22H7.07 - symbol:prp5 "WD repeat protein Prp5... 283 1.5e-22 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 283 1.5e-22 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 265 1.8e-22 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 278 1.8e-22 1
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 291 1.8e-22 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 286 2.3e-22 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 277 3.1e-22 1
RGD|621047 - symbol:Plrg1 "pleiotropic regulator 1" speci... 281 3.5e-22 2
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 196 7.2e-22 2
FB|FBgn0036354 - symbol:Poc1 "Proteome of centrioles 1" s... 271 8.6e-22 1
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 279 9.7e-22 1
ASPGD|ASPL0000058626 - symbol:AN1208 species:162425 "Emer... 274 1.4e-21 1
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 277 2.0e-21 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 233 2.1e-21 2
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 276 2.2e-21 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 276 2.6e-21 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 254 3.0e-21 1
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 277 3.3e-21 1
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 276 3.4e-21 1
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 276 3.4e-21 1
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 276 3.9e-21 1
ZFIN|ZDB-GENE-040426-2787 - symbol:plrg1 "pleiotropic reg... 272 4.3e-21 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 272 6.1e-21 1
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 251 6.4e-21 1
ASPGD|ASPL0000005389 - symbol:sconB species:162425 "Emeri... 273 6.8e-21 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 272 8.5e-21 1
FB|FBgn0030365 - symbol:Tango4 "Transport and Golgi organ... 268 9.6e-21 1
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 271 1.1e-20 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 271 1.1e-20 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 271 1.1e-20 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 271 1.1e-20 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 267 1.7e-20 1
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 269 1.8e-20 1
DICTYBASE|DDB_G0293070 - symbol:DDB_G0293070 "TROVE domai... 276 2.1e-20 1
DICTYBASE|DDB_G0279507 - symbol:plrg1 "putative RNA splic... 266 2.1e-20 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 262 4.7e-20 1
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 264 5.3e-20 1
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 264 5.3e-20 1
FB|FBgn0020618 - symbol:Rack1 "Receptor of activated prot... 223 5.3e-20 2
WB|WBGene00007972 - symbol:prp-4 species:6239 "Caenorhabd... 260 9.1e-20 1
WARNING: Descriptions of 1517 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 1810 (642.2 bits), Expect = 1.8e-194, Sum P(2) = 1.8e-194
Identities = 320/406 (78%), Positives = 369/406 (90%)
Query: 3 IETETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDHE 62
++T+ VMCLLTDPEG LG+ MY PQ AGP QL+Q+VN+ L+NEE LPY+FY+SD E
Sbjct: 4 MDTDEGKTVMCLLTDPEGTHLGSAMYIPQKAGPLQLTQLVNRFLDNEEMLPYSFYVSDEE 63
Query: 63 LLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQ 122
LLVP+G+YLEK+KVSVEKVL+IVYQ QAVFRIRPVNRCS TIAGH EAVL V+FSPDG+Q
Sbjct: 64 LLVPVGTYLEKNKVSVEKVLTIVYQQQAVFRIRPVNRCSQTIAGHAEAVLCVSFSPDGKQ 123
Query: 123 LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTG 182
LASGSGDTTVRLWDL T+TP+F C GHKNWVL +AWS DGKHLVSGSK+GE+ CW+P+ G
Sbjct: 124 LASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKG 183
Query: 183 KPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLA 242
+ G+PL+GHKKWITGISWEPVHL++PCRRFV++SKDGDARIWD++L+K +ICLSGHTLA
Sbjct: 184 ELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLA 243
Query: 243 VTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDH 302
VTCVKWGGDG+IYTGSQDCTIK+WETTQGKLIRELKGHGHW+NSLALSTEY LRTGAFDH
Sbjct: 244 VTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTEYVLRTGAFDH 303
Query: 303 TGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
TG+QY P E K+ ALERYNK KG++PERLVSGSDDFTMFLWEP+VSKQPK R+TGHQQL
Sbjct: 304 TGRQYP-PNEEKQKALERYNKTKGDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQL 362
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
VNHVYFSPDG+W+ASASFDKS++LWNG TG+FV VFRGHVGPVYQ+
Sbjct: 363 VNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQV 408
Score = 233 (87.1 bits), Expect = 9.9e-17, P = 9.9e-17
Identities = 85/318 (26%), Positives = 143/318 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT-QTPMFKCTGHKNWVLCIAW--- 158
T GH VL+VA+SPDG+ L SGS + W+ + TGHK W+ I+W
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPV 205
Query: 159 --SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
S+ + V+ SK G+ + WD T K S LSGH +T + W + +
Sbjct: 206 HLSSPCRRFVTSSKDGDARIWDI-TLKKSIICLSGHTLAVTCVKWGGDGI------IYTG 258
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRE 276
S+D ++W+ + K + L GH + + + V+ TG+ D T + + + K +
Sbjct: 259 SQDCTIKMWETTQGKLIRELKGHGHWINSLALSTEYVLRTGAFDHTGRQYPPNEEKQ-KA 317
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKGN---APER- 331
L+ + N + L +G+ D T + S + K L + ++ + +P+
Sbjct: 318 LERY----NKTKGDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGK 373
Query: 332 -LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
+ S S D ++ LW ++ Q T GH V V +S D + + S S D ++K+W
Sbjct: 374 WIASASFDKSVRLWN-GITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIR 432
Query: 391 TGKFVAVFRGHVGPVYQI 408
T K GH V+ +
Sbjct: 433 TKKLKQDLPGHADEVFAV 450
Score = 188 (71.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 49/153 (32%), Positives = 79/153 (51%)
Query: 117 SPDGRQLASGSGDTTVRLWDLN-TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQ 175
SP+ +L SGS D T+ LW+ + ++ P + TGH+ V + +S DGK + S S ++
Sbjct: 328 SPE--RLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVR 385
Query: 176 CWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVIC 235
W+ TG+ GH + +SW +A R +S SKD +IW++ +K
Sbjct: 386 LWNGITGQ-FVTVFRGHVGPVYQVSW-----SADSRLLLSGSKDSTLKIWEIRTKKLKQD 439
Query: 236 LSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
L GH V V W DG + +G +D +K+W+
Sbjct: 440 LPGHADEVFAVDWSPDGEKVVSGGKDRVLKLWK 472
Score = 183 (69.5 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 44/122 (36%), Positives = 64/122 (52%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH + V V FSPDG+ +AS S D +VRLW+ T + GH V ++WSAD +
Sbjct: 356 LTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSR 415
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L+SGSK L+ W+ +T K + L GH + + W P + VS KD +
Sbjct: 416 LLLSGSKDSTLKIWEIRTKKLKQD-LPGHADEVFAVDWSP-----DGEKVVSGGKDRVLK 469
Query: 224 IW 225
+W
Sbjct: 470 LW 471
Score = 140 (54.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 42/143 (29%), Positives = 72/143 (50%)
Query: 254 IYTGSQDCTIKVWETTQGKLIRE-LKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPE 311
+ +GS D T+ +WE + K ++ L GH VN + S + + + +FD + + ++
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 312 EMKKAALERY----NKIKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV 366
+ ++ +A RL+ SGS D T+ +WE +K+ K + GH V V
Sbjct: 392 GQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIR-TKKLKQDLPGHADEVFAV 450
Query: 367 YFSPDGQWVASASFDKSIKLWNG 389
+SPDG+ V S D+ +KLW G
Sbjct: 451 DWSPDGEKVVSGGKDRVLKLWKG 473
Score = 96 (38.9 bits), Expect = 1.8e-194, Sum P(2) = 1.8e-194
Identities = 19/20 (95%), Positives = 20/20 (100%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
SWSADSRLLLSGSKDSTLK+
Sbjct: 409 SWSADSRLLLSGSKDSTLKI 428
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 1261 (449.0 bits), Expect = 1.7e-128, P = 1.7e-128
Identities = 230/398 (57%), Positives = 288/398 (72%)
Query: 17 DPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKV 76
D G LG+P P + P +L + N LL E+ LP AF++ D E++ LG LE V
Sbjct: 23 DEGGQLLGSPFDVPVDITPDRLQLVCNALLAQEDPLPLAFFVHDAEIVSSLGKTLESQAV 82
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
EKVL I+YQPQA+FR+R V RC++++ GH+EAV+SVAFSP G+ LASGSGDTTVR WD
Sbjct: 83 ETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWD 142
Query: 137 LNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI 196
L+T+TP F C GH++WVL I+WS DG+ L SG K G++ WDP TGK G L+GH KWI
Sbjct: 143 LSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWI 202
Query: 197 TGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT 256
TG+SWEP+H N CR S+SKDG RIWD + +C L+GHT +VTC++WGGDG++Y+
Sbjct: 203 TGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYS 262
Query: 257 GSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS------SP 310
SQD TIKVW G L R L+GHGHWVN++ALST+YALRTGAF+ + S
Sbjct: 263 ASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSL 322
Query: 311 EEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP 370
+E+K+ AL RYN ++G PERLVSGSDDFT+FLW PA K+P TRMTGHQ L+N V FSP
Sbjct: 323 QELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSP 382
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
D + VASASFDKSIKLW+G TGK++A RGHV VYQI
Sbjct: 383 DSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI 420
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 82/162 (50%), Positives = 102/162 (62%)
Query: 309 SPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYF 368
S +E+K+ AL RYN ++G PERLVSGSDDFT+FLW PA K+P TRMTGHQ L+N V F
Sbjct: 321 SLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLF 380
Query: 369 SPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE----LIYCFRYPSNF-- 422
SPD + VASASFDKSIKLW+G TGK++A RGHV VYQI + L+ S
Sbjct: 381 SPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKV 440
Query: 423 YCVVDMSCCMSL-------YS--WSADSRLLLSGSKDSTLKV 455
+ V M L Y+ WS D + + SG KD L++
Sbjct: 441 WDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRI 482
Score = 256 (95.2 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 91/324 (28%), Positives = 147/324 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAW--- 158
T GH VLS+++SPDGR+LASG + + LWD +T + + GH W+ ++W
Sbjct: 151 TCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPL 210
Query: 159 --SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ + +++ S SK G ++ WD G+ L+GH + +T + W L SA
Sbjct: 211 HANPECRYVASSSKDGSVRIWDTTAGRCE-RILTGHTQSVTCLRWGGDGL------LYSA 263
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIYTGS-QDCTIKVW-ETTQGK 272
S+D ++W V+C L GH V + D + TG+ + V + QG
Sbjct: 264 SQDRTIKVWRA--HDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGS 321
Query: 273 LIRELKGHG-HWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER------YNKIK 325
L +ELK N + L +G+ D T +S P E KK N++
Sbjct: 322 L-QELKERALSRYNLVRGQGPERLVSGSDDFTLFLWS-PAEDKKPLTRMTGHQALINQVL 379
Query: 326 GNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+ R+V S S D ++ LW+ K + + GH V + +S D + + S S D ++
Sbjct: 380 FSPDSRIVASASFDKSIKLWDGRTGKYLAS-LRGHVAAVYQIAWSADSRLLVSGSSDSTL 438
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQI 408
K+W+ K GH VY +
Sbjct: 439 KVWDVKAQKLAMDLPGHADEVYAV 462
Score = 246 (91.7 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 82/298 (27%), Positives = 134/298 (44%)
Query: 103 TIAGHTEAVLSVAF-----SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
T+AGH++ + +++ +P+ R +AS S D +VR+WD TGH V C+
Sbjct: 194 TLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLR 253
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
W DG L S S+ ++ W G L GH W+ ++ L+ A
Sbjct: 254 WGGDGL-LYSASQDRTIKVWRAHDGVLC-RTLQGHGHWVNTMA-----LSTDYALRTGAF 306
Query: 218 KDGDARIWDVSLRKCVICLSGHTLA-VTCVKWGGDGVIYTGSQDCTIKVWETTQGKL-IR 275
+ +A + L+ + L L+ V+ G + +GS D T+ +W + K +
Sbjct: 307 EPAEASVNPQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLT 366
Query: 276 ELKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPEEMKKAALERY----NKIKGNAPE 330
+ GH +N + S + + A FD + K + A+L + +I +A
Sbjct: 367 RMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADS 426
Query: 331 RL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
RL VSGS D T+ +W+ K + GH V V +SPDGQ VAS DK +++W
Sbjct: 427 RLLVSGSSDSTLKVWDVKAQKLAMD-LPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 160 (61.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A++ GH AV +A+S D R L SGS D+T+++WD+ Q GH + V + WS D
Sbjct: 408 ASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPD 467
Query: 162 GKHLVSGSKAGELQCW 177
G+ + SG K L+ W
Sbjct: 468 GQRVASGGKDKCLRIW 483
Score = 128 (50.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 39/145 (26%), Positives = 74/145 (51%)
Query: 277 LKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALE--RYNKIKGN-APE-- 330
L+GH V S+A S T L +G+ D T + + E + R+ + + +P+
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGR 169
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV-----YFSPDGQWVASASFDKSIK 385
+L SG + + LW+P+ KQ + GH + + + + +P+ ++VAS+S D S++
Sbjct: 170 KLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVR 229
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRF 410
+W+ T G+ + GH V +R+
Sbjct: 230 IWDTTAGRCERILTGHTQSVTCLRW 254
Score = 45 (20.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 437 WSADSRLLLSGSKDSTLKV 455
W D LL S S+D T+KV
Sbjct: 254 WGGDG-LLYSASQDRTIKV 271
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 1256 (447.2 bits), Expect = 5.9e-128, P = 5.9e-128
Identities = 233/418 (55%), Positives = 295/418 (70%)
Query: 1 MEIETETT-NNVMCLLT---DPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAF 56
+E+ E ++V LL D G LG+P P + P QL + N LL +E LP AF
Sbjct: 5 VEVSDEAAASDVQRLLVQFQDEGGQLLGSPFDVPVDITPDQLQLVCNALLAQDEPLPLAF 64
Query: 57 YISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAF 116
Y+ D E++ LG LE V EK++ I+YQPQAVFR+R V RC++++ GH+EAV+SVAF
Sbjct: 65 YVHDAEIVSSLGKTLESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAF 124
Query: 117 SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQC 176
SP G+ LASGSGDTTVR WDL+T+TP F C GH++WVL I+WS DGK L SG K G++
Sbjct: 125 SPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILL 184
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
WDP TG G L+GH KWITG+SWEP+H+N CR S+SKDG R+WD + +C L
Sbjct: 185 WDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERIL 244
Query: 237 SGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR 296
+GHT +VTC++WGGDG++Y+ SQD TIKVW G L R L+GHGHWVN++ALST+YALR
Sbjct: 245 TGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALR 304
Query: 297 TGAFD------HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSK 350
TGAF+ + S +E+K+ A RYN ++G PERLVSGSDDFT+FLW PA K
Sbjct: 305 TGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDK 364
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
+P RMTGHQ L+N V FSPD + VASASFDKSIKLW+G TGK++A RGHV VYQI
Sbjct: 365 KPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI 422
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 78/162 (48%), Positives = 99/162 (61%)
Query: 309 SPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYF 368
S +E+K+ A RYN ++G PERLVSGSDDFT+FLW PA K+P RMTGHQ L+N V F
Sbjct: 323 SLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLF 382
Query: 369 SPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE----LIYCFRYPSNFYC 424
SPD + VASASFDKSIKLW+G TGK++A RGHV VYQI + L+ S
Sbjct: 383 SPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKV 442
Query: 425 --------VVDM-SCCMSLYS--WSADSRLLLSGSKDSTLKV 455
D+ +Y+ WS D + + SG KD L++
Sbjct: 443 WDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRI 484
Score = 275 (101.9 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 91/324 (28%), Positives = 150/324 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAW--- 158
T GH VLS+++SPDG++LASG + + LWD +T T + + TGH W+ ++W
Sbjct: 153 TCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPL 212
Query: 159 --SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ + +++ S SK G ++ WD G+ L+GH + +T + W L SA
Sbjct: 213 HMNPECRYVASSSKDGSVRVWDTTAGRCE-RILTGHTQSVTCLRWGGDGL------LYSA 265
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIYTGS---QDCTIKVWETTQG 271
S+D ++W V+C L GH V + D + TG+ + T+ + QG
Sbjct: 266 SQDRTIKVWRA--HDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNA-QDLQG 322
Query: 272 KLIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALER-----YNKIK 325
L +ELK +L L +G+ D T +S E+ K A N++
Sbjct: 323 SL-KELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVL 381
Query: 326 GNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+ R+V S S D ++ LW+ K + + GH V + +S D + + S S D ++
Sbjct: 382 FSPDSRIVASASFDKSIKLWDGRTGKYLAS-LRGHVAAVYQIAWSADSRLLVSGSSDSTL 440
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQI 408
K+W+ K GH VY +
Sbjct: 441 KVWDVKAQKLTTDLPGHADEVYAV 464
Score = 241 (89.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 82/297 (27%), Positives = 132/297 (44%)
Query: 103 TIAGHTEAVLSVAF-----SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
T+ GH++ + +++ +P+ R +AS S D +VR+WD TGH V C+
Sbjct: 196 TLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLR 255
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
W DG L S S+ ++ W G L GH W+ ++ + F A
Sbjct: 256 WGGDGL-LYSASQDRTIKVWRAHDGVLC-RTLQGHGHWVNTMALSTDYA-LRTGAFEPAE 312
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL-IRE 276
+A+ SL++ S V+ G + +GS D T+ +W + K +
Sbjct: 313 ATVNAQDLQGSLKELKERASSR---YNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLAR 369
Query: 277 LKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPEEMKKAALERY----NKIKGNAPER 331
+ GH +N + S + + A FD + K + A+L + +I +A R
Sbjct: 370 MTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 429
Query: 332 L-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
L VSGS D T+ +W+ K T + GH V V +SPDGQ VAS DK +++W
Sbjct: 430 LLVSGSSDSTLKVWDVKAQKLT-TDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 194 (73.4 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 47/124 (37%), Positives = 62/124 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A + GH + V FSPD R +AS S D +++LWD T + GH V IAWSAD
Sbjct: 368 ARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSAD 427
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ LVSGS L+ WD + K + + L GH + + W P +R S KD
Sbjct: 428 SRLLVSGSSDSTLKVWDVKAQKLTTD-LPGHADEVYAVDWSP-----DGQRVASGGKDKC 481
Query: 222 ARIW 225
RIW
Sbjct: 482 LRIW 485
Score = 128 (50.1 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 39/145 (26%), Positives = 74/145 (51%)
Query: 277 LKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALE--RYNKIKGN-APE-- 330
L+GH V S+A S T L +G+ D T + + E + R+ + + +P+
Sbjct: 112 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGK 171
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV-----YFSPDGQWVASASFDKSIK 385
+L SG + + LW+P+ Q +TGH + + + + +P+ ++VAS+S D S++
Sbjct: 172 KLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVR 231
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRF 410
+W+ T G+ + GH V +R+
Sbjct: 232 VWDTTAGRCERILTGHTQSVTCLRW 256
Score = 45 (20.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 437 WSADSRLLLSGSKDSTLKV 455
W D LL S S+D T+KV
Sbjct: 256 WGGDG-LLYSASQDRTIKV 273
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 1255 (446.8 bits), Expect = 7.6e-128, P = 7.6e-128
Identities = 229/413 (55%), Positives = 289/413 (69%)
Query: 2 EIETETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDH 61
E T ++ D G LG+P P + P +L + N LL E+ LP AFY+ D
Sbjct: 9 EAATRDVQRLLVQFQDEGGQLLGSPFDVPVDITPDKLQLVCNALLAQEDPLPLAFYVHDA 68
Query: 62 ELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGR 121
E++ LG LE V EKVL I+YQPQA+FR+R V RC++++ GH+EAV+SVAFSP G+
Sbjct: 69 EIVSSLGRTLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGK 128
Query: 122 QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT 181
LASGSGDTTVR WDL+T+TP F C GH++WVL I+WS DGK L SG K G++ WDP T
Sbjct: 129 YLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPST 188
Query: 182 GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTL 241
GK G L+GH KWIT +SWEP+H N CR S+SKDG R+WD + +C L+GH
Sbjct: 189 GKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQ 248
Query: 242 AVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFD 301
+VTC++WGGDG++Y+ SQD TIKVW G L R L+GHGHWVN++ALST+YALRTGAF+
Sbjct: 249 SVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFE 308
Query: 302 HTGKQYS------SPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTR 355
+ S +E+K+ AL RYN ++G PERLVSGSDDFT+FLW PA K+P R
Sbjct: 309 PAEASVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLAR 368
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
MTGHQ L+N V FSPD + +ASASFDKSIKLW+G TGK++A RGHV VYQI
Sbjct: 369 MTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI 421
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 79/163 (48%), Positives = 101/163 (61%)
Query: 309 SPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYF 368
S +E+K+ AL RYN ++G PERLVSGSDDFT+FLW PA K+P RMTGHQ L+N V F
Sbjct: 322 SLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVF 381
Query: 369 SPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE----LIYCFRYPSNFYC 424
SPD + +ASASFDKSIKLW+G TGK++A RGHV VYQI + L+ S
Sbjct: 382 SPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK- 440
Query: 425 VVDMSC----------CMSLYS--WSADSRLLLSGSKDSTLKV 455
V D+ +Y+ WS D + + SG KD L++
Sbjct: 441 VWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRI 483
Score = 262 (97.3 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 87/324 (26%), Positives = 149/324 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAW--- 158
T GH VLS+++SPDG++LASG + + LWD +T + + TGH W+ ++W
Sbjct: 152 TCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPL 211
Query: 159 --SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ + +++ S SK G ++ WD G+ L+GH + +T + W L SA
Sbjct: 212 HANPECRYVASSSKDGSVRVWDTTAGRCE-RTLTGHAQSVTCLRWGGDGL------LYSA 264
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIYTGS---QDCTIKVWETTQG 271
S+D ++W V+C L GH V + D + TG+ + ++ + +G
Sbjct: 265 SQDRTIKVWRA--HDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNA-QDLRG 321
Query: 272 KLIRELKGHG-HWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER-----YNKIK 325
L +ELK N + L +G+ D T +S E+ K A N++
Sbjct: 322 SL-QELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVV 380
Query: 326 GNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+ R++ S S D ++ LW+ K + + GH V + +S D + + S S D ++
Sbjct: 381 FSPDSRVIASASFDKSIKLWDGRTGKYLAS-LRGHVAAVYQIAWSADSRLLVSGSSDSTL 439
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQI 408
K+W+ K GH VY +
Sbjct: 440 KVWDVKAQKLSTDLPGHADEVYAV 463
Score = 250 (93.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 81/297 (27%), Positives = 135/297 (45%)
Query: 104 IAGHTEAVLSVAF-----SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+ GH++ + ++++ +P+ R +AS S D +VR+WD TGH V C+ W
Sbjct: 196 LTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRW 255
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG L S S+ ++ W G L GH W+ ++ L+ A +
Sbjct: 256 GGDGL-LYSASQDRTIKVWRAHDGVLC-RTLQGHGHWVNTMA-----LSTDYALRTGAFE 308
Query: 219 DGDARIWDVSLRKCVICLSGHTLA-VTCVKWGGDGVIYTGSQDCTIKVWETTQGKL-IRE 276
+A + LR + L L+ V+ G + +GS D T+ +W + K +
Sbjct: 309 PAEASVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLAR 368
Query: 277 LKGHGHWVNSLALSTEY-ALRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGNAPER 331
+ GH +N + S + + + +FD + K + A+L + +I +A R
Sbjct: 369 MTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 428
Query: 332 L-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
L VSGS D T+ +W+ K T + GH V V +SPDGQ VAS DK +++W
Sbjct: 429 LLVSGSSDSTLKVWDVKAQKL-STDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 200 (75.5 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 48/124 (38%), Positives = 62/124 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A + GH + V FSPD R +AS S D +++LWD T + GH V IAWSAD
Sbjct: 367 ARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSAD 426
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ LVSGS L+ WD + K S + L GH + + W P +R S KD
Sbjct: 427 SRLLVSGSSDSTLKVWDVKAQKLSTD-LPGHADEVYAVDWSP-----DGQRVASGGKDKC 480
Query: 222 ARIW 225
RIW
Sbjct: 481 LRIW 484
Score = 130 (50.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 40/145 (27%), Positives = 74/145 (51%)
Query: 277 LKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALE--RYNKIKGN-APE-- 330
L+GH V S+A S T L +G+ D T + + E + R+ + + +P+
Sbjct: 111 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 170
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV-----YFSPDGQWVASASFDKSIK 385
+L SG + + LW+P+ KQ +TGH + + + + +P+ ++VAS+S D S++
Sbjct: 171 KLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVR 230
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRF 410
+W+ T G+ GH V +R+
Sbjct: 231 VWDTTAGRCERTLTGHAQSVTCLRW 255
Score = 45 (20.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 437 WSADSRLLLSGSKDSTLKV 455
W D LL S S+D T+KV
Sbjct: 255 WGGDG-LLYSASQDRTIKV 272
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 1254 (446.5 bits), Expect = 9.6e-128, P = 9.6e-128
Identities = 232/415 (55%), Positives = 292/415 (70%)
Query: 3 IETETTNNVMCLLT---DPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYIS 59
+E +V LL D G LG+P P + P +L + N LL EE LP AFY+
Sbjct: 6 VEEAAAGDVQRLLVQFQDEGGQLLGSPFDVPVDITPDKLQLVCNALLAQEEPLPLAFYVH 65
Query: 60 DHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPD 119
D E++ LG LE V EK++ I+YQPQAVFR+R V RC++++ GH+EAV+SVAFSP
Sbjct: 66 DAEIVSSLGKTLESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPT 125
Query: 120 GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDP 179
G+ LASGSGDTTVR WDL+T+TP F C GH++WVL I+WS DGK L SG K G++ WDP
Sbjct: 126 GKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDP 185
Query: 180 QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGH 239
TG G L+GH KWITG+SWEP+H+N CR S+SKDG R+WD + +C L+GH
Sbjct: 186 STGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGH 245
Query: 240 TLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGA 299
T +VTC++WGGDG++Y+ SQD TIKVW G L R L+GHGHWVN++ALST+YALRTGA
Sbjct: 246 TQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGA 305
Query: 300 FD------HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPK 353
F+ + S +E+K+ A RYN ++G PERLVSGSDDFT+FLW PA K+P
Sbjct: 306 FEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPL 365
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
RMTGHQ L+N V FSPD + VASASFDKSIKLW+G TGK++A RGHV VYQI
Sbjct: 366 ARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI 420
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 79/162 (48%), Positives = 99/162 (61%)
Query: 309 SPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYF 368
S +E+K+ A RYN ++G PERLVSGSDDFT+FLW PA K+P RMTGHQ L+N V F
Sbjct: 321 SLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLF 380
Query: 369 SPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE----LIYCFRYPSNF-- 422
SPD + VASASFDKSIKLW+G TGK++A RGHV VYQI + L+ S
Sbjct: 381 SPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKV 440
Query: 423 YCVVDMSCCMSL-------YS--WSADSRLLLSGSKDSTLKV 455
+ V L Y+ WS D + + SG KD L++
Sbjct: 441 WDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRI 482
Score = 270 (100.1 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 91/324 (28%), Positives = 149/324 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAW--- 158
T GH VLS+++SPDG++LASG + V LWD +T + + TGH W+ ++W
Sbjct: 151 TCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPL 210
Query: 159 --SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ + +++ S SK G ++ WD G+ L+GH + +T + W L SA
Sbjct: 211 HMNPECRYVASSSKDGSVRVWDTTAGRCE-RILTGHTQSVTCLRWGGDGL------LYSA 263
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIYTGS---QDCTIKVWETTQG 271
S+D ++W V+C L GH V + D + TG+ + T+ + QG
Sbjct: 264 SQDRTIKVWRA--HDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNA-QDLQG 320
Query: 272 KLIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALER-----YNKIK 325
L +ELK +L L +G+ D T +S E+ K A N++
Sbjct: 321 SL-KELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVL 379
Query: 326 GNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+ R+V S S D ++ LW+ K + + GH V + +S D + + S S D ++
Sbjct: 380 FSPDSRIVASASFDKSIKLWDGRTGKYLAS-LRGHVAAVYQIAWSADSRLLVSGSSDSTL 438
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQI 408
K+W+ K GH VY +
Sbjct: 439 KVWDVKAQKLATDLPGHADEVYAV 462
Score = 241 (89.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 82/297 (27%), Positives = 132/297 (44%)
Query: 103 TIAGHTEAVLSVAF-----SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
T+ GH++ + +++ +P+ R +AS S D +VR+WD TGH V C+
Sbjct: 194 TLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLR 253
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
W DG L S S+ ++ W G L GH W+ ++ + F A
Sbjct: 254 WGGDGL-LYSASQDRTIKVWRAHDGVLC-RTLQGHGHWVNTMALSTDYA-LRTGAFEPAE 310
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL-IRE 276
+A+ SL++ S V+ G + +GS D T+ +W + K +
Sbjct: 311 ATVNAQDLQGSLKELKERASSR---YNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLAR 367
Query: 277 LKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPEEMKKAALERY----NKIKGNAPER 331
+ GH +N + S + + A FD + K + A+L + +I +A R
Sbjct: 368 MTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 427
Query: 332 L-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
L VSGS D T+ +W+ K T + GH V V +SPDGQ VAS DK +++W
Sbjct: 428 LLVSGSSDSTLKVWDVKAQKLA-TDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 194 (73.4 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 47/124 (37%), Positives = 62/124 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A + GH + V FSPD R +AS S D +++LWD T + GH V IAWSAD
Sbjct: 366 ARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSAD 425
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ LVSGS L+ WD + K + + L GH + + W P +R S KD
Sbjct: 426 SRLLVSGSSDSTLKVWDVKAQKLATD-LPGHADEVYAVDWSP-----DGQRVASGGKDKC 479
Query: 222 ARIW 225
RIW
Sbjct: 480 LRIW 483
Score = 127 (49.8 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 39/145 (26%), Positives = 74/145 (51%)
Query: 277 LKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALE--RYNKIKGN-APE-- 330
L+GH V S+A S T L +G+ D T + + E + R+ + + +P+
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGK 169
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV-----YFSPDGQWVASASFDKSIK 385
+L SG + + LW+P+ Q +TGH + + + + +P+ ++VAS+S D S++
Sbjct: 170 KLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVR 229
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRF 410
+W+ T G+ + GH V +R+
Sbjct: 230 VWDTTAGRCERILTGHTQSVTCLRW 254
Score = 45 (20.9 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 437 WSADSRLLLSGSKDSTLKV 455
W D LL S S+D T+KV
Sbjct: 254 WGGDG-LLYSASQDRTIKV 271
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 1247 (444.0 bits), Expect = 5.3e-127, P = 5.3e-127
Identities = 228/398 (57%), Positives = 285/398 (71%)
Query: 17 DPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKV 76
D G LG+P P + P +L + N LL E+ LP AFY+ D E++ LG LE V
Sbjct: 23 DEGGQLLGSPFDVPVDITPDKLQLVCNALLAQEDPLPLAFYVHDAEIISSLGKTLESQAV 82
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
EKVL I+YQPQAVFR+R V RC++++ GH+EAV+SVAFSP G+ LASGSGDTTVR WD
Sbjct: 83 ETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWD 142
Query: 137 LNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI 196
L+T+TP F C GH++WVL I+WS DGK L SG K G++ WDP TGK G L+GH KWI
Sbjct: 143 LSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWI 202
Query: 197 TGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT 256
T +SWEP+H N CR S+SKDG R+WD + +C L+GHT +VTC++WGGDG++Y+
Sbjct: 203 TALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYS 262
Query: 257 GSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS------SP 310
SQD TIKVW G L R L+GHGHWVN++ALST+YALRTGAF+ + S
Sbjct: 263 ASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSL 322
Query: 311 EEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP 370
+E+K+ AL RYN ++G ERLVSGSDDFT+FLW PA K+P RMTGHQ L+N V FSP
Sbjct: 323 QELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSP 382
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
D + +ASASFDKSIKLW+G TGK++A RGHV VYQI
Sbjct: 383 DSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI 420
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 78/162 (48%), Positives = 99/162 (61%)
Query: 309 SPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYF 368
S +E+K+ AL RYN ++G ERLVSGSDDFT+FLW PA K+P RMTGHQ L+N V F
Sbjct: 321 SLQELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLF 380
Query: 369 SPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE----LIYCFRYPSNF-- 422
SPD + +ASASFDKSIKLW+G TGK++A RGHV VYQI + L+ S
Sbjct: 381 SPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKV 440
Query: 423 YCVVDMSCCMSL-------YS--WSADSRLLLSGSKDSTLKV 455
+ V L Y+ WS D + + SG KD L++
Sbjct: 441 WDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRI 482
Score = 260 (96.6 bits), Expect = 8.4e-20, P = 8.4e-20
Identities = 87/324 (26%), Positives = 149/324 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAW--- 158
T GH VLS+++SPDG++LASG + + LWD +T + + GH W+ ++W
Sbjct: 151 TCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPL 210
Query: 159 --SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ + +++ S SK G ++ WD G+ L+GH + +T + W L SA
Sbjct: 211 HANPECRYVASSSKDGSVRVWDTTAGRCE-RILTGHTQSVTCLRWGGDGL------LYSA 263
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIYTGS---QDCTIKVWETTQG 271
S+D ++W V+C L GH V + D + TG+ + ++ + +G
Sbjct: 264 SQDRTIKVWRA--HDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNA-QDLRG 320
Query: 272 KLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALER-----YNKIK 325
L +ELK +L L +G+ D T +S E+ K A N++
Sbjct: 321 SL-QELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVL 379
Query: 326 GNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+ R++ S S D ++ LW+ K + + GH V + +S D + + S S D ++
Sbjct: 380 FSPDSRIIASASFDKSIKLWDGRTGKYLAS-LRGHVAAVYQIAWSADSRLLVSGSSDSTL 438
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQI 408
K+W+ K A GH VY +
Sbjct: 439 KVWDVKAQKLAADLPGHADEVYAV 462
Score = 241 (89.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 82/297 (27%), Positives = 134/297 (45%)
Query: 104 IAGHTEAVLSVAF-----SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+AGH++ + ++++ +P+ R +AS S D +VR+WD TGH V C+ W
Sbjct: 195 LAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRW 254
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG L S S+ ++ W G L GH W+ ++ L+ A +
Sbjct: 255 GGDGL-LYSASQDRTIKVWRAHDGVLC-RTLQGHGHWVNTMA-----LSTDYALRTGAFE 307
Query: 219 DGDARIWDVSLRKCVICLSGHTLA-VTCVKWGGDGVIYTGSQDCTIKVWETTQGKL-IRE 276
+A + LR + L L+ V+ G + +GS D T+ +W + K +
Sbjct: 308 PAEASVNAQDLRGSLQELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLAR 367
Query: 277 LKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPEEMKKAALERY----NKIKGNAPER 331
+ GH +N + S + + A FD + K + A+L + +I +A R
Sbjct: 368 MTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 427
Query: 332 L-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
L VSGS D T+ +W+ K + GH V V +SPDGQ VAS DK +++W
Sbjct: 428 LLVSGSSDSTLKVWDVKAQKLAAD-LPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 197 (74.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 47/124 (37%), Positives = 62/124 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A + GH + V FSPD R +AS S D +++LWD T + GH V IAWSAD
Sbjct: 366 ARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSAD 425
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ LVSGS L+ WD + K + + L GH + + W P +R S KD
Sbjct: 426 SRLLVSGSSDSTLKVWDVKAQKLAAD-LPGHADEVYAVDWSP-----DGQRVASGGKDKC 479
Query: 222 ARIW 225
RIW
Sbjct: 480 LRIW 483
Score = 128 (50.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 39/145 (26%), Positives = 74/145 (51%)
Query: 277 LKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALE--RYNKIKGN-APE-- 330
L+GH V S+A S T L +G+ D T + + E + R+ + + +P+
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 169
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV-----YFSPDGQWVASASFDKSIK 385
+L SG + + LW+P+ KQ + GH + + + + +P+ ++VAS+S D S++
Sbjct: 170 KLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVR 229
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRF 410
+W+ T G+ + GH V +R+
Sbjct: 230 VWDTTAGRCERILTGHTQSVTCLRW 254
Score = 45 (20.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 437 WSADSRLLLSGSKDSTLKV 455
W D LL S S+D T+KV
Sbjct: 254 WGGDG-LLYSASQDRTIKV 271
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
Identities = 227/410 (55%), Positives = 282/410 (68%)
Query: 5 TETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDHELL 64
TE ++ D G PLG+P P + P +L + N LL +E +P AF+ D E++
Sbjct: 24 TEDVERLLIQFRDEAGEPLGSPFDVPVSITPDKLQLVCNALLQQDEPVPLAFFFHDAEIV 83
Query: 65 VPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLA 124
V L L V EKVL I+YQPQAVFR+R V RC++++ GHTEAV+SVAFSP G+ LA
Sbjct: 84 VSLEKTLAGQAVETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHTEAVISVAFSPTGKYLA 143
Query: 125 SGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKP 184
SGSGDTTVR WDL+T+TP F GH++WVL IAWS DGK L SG K ++ WDP TG
Sbjct: 144 SGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQ 203
Query: 185 SGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVT 244
G L+GH KWIT + WEP+H+N CR SASKDG RIWD + +C L+GHT +VT
Sbjct: 204 IGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVT 263
Query: 245 CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFD--- 301
CVKWGGDG++Y+ SQD TIKVW + G L R L+GH HWVN++ALST+Y LRTGAF+
Sbjct: 264 CVKWGGDGLLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVLRTGAFEPAE 323
Query: 302 ---HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTG 358
+ S E+K A +RY+K++G PERLVSGSDDFT+FLW PA K+P RMTG
Sbjct: 324 ATINPQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTG 383
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
HQ L+N V FSPD + +ASASFDKSIKLW G TGK++ RGHV VYQI
Sbjct: 384 HQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQI 433
Score = 342 (125.4 bits), Expect = 4.3e-31, P = 4.3e-31
Identities = 74/159 (46%), Positives = 97/159 (61%)
Query: 312 EMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPD 371
E+K A +RY+K++G PERLVSGSDDFT+FLW PA K+P RMTGHQ L+N V FSPD
Sbjct: 337 ELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPD 396
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE----LIYCFRYPSNFYC--- 424
+ +ASASFDKSIKLW G TGK++ RGHV VYQI + L+ S
Sbjct: 397 TRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDA 456
Query: 425 -----VVDM-SCCMSLYS--WSADSRLLLSGSKDSTLKV 455
+D+ +++ WS D + + SG KD L++
Sbjct: 457 ETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRI 495
Score = 286 (105.7 bits), Expect = 8.2e-23, P = 8.2e-23
Identities = 95/324 (29%), Positives = 152/324 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAW--- 158
T GH VLS+A+SPDG++LASG ++ + LWD T + + TGH W+ C+ W
Sbjct: 164 TAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPL 223
Query: 159 --SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ + ++L S SK G ++ WD G+ L+GH + +T + W L S+
Sbjct: 224 HINPECRYLASASKDGSIRIWDTLMGR-CDKILTGHTQSVTCVKWGGDGL------LYSS 276
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIYTGS---QDCTIKVWETTQG 271
S+D ++W + ++C L GH V + D V+ TG+ + TI + + G
Sbjct: 277 SQDRTIKVW--RSQDGILCRTLQGHAHWVNTMALSTDYVLRTGAFEPAEATINPQDMS-G 333
Query: 272 KLIRELKGHGHW-VNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-------NK 323
L ELK + + L +G+ D T + P E KK LER N+
Sbjct: 334 SLA-ELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWR-PAEDKKP-LERMTGHQALINQ 390
Query: 324 IKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ + R++ S S D ++ LWE K T + GH V + +S D + + S S D
Sbjct: 391 VLFSPDTRIIASASFDKSIKLWEGRTGKY-LTSLRGHVSAVYQIAWSADSRLLVSGSSDS 449
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVY 406
++K+W+ T K GH V+
Sbjct: 450 TLKVWDAETKKLAIDLPGHADEVF 473
Score = 232 (86.7 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 83/307 (27%), Positives = 137/307 (44%)
Query: 98 NRCSATIAGHTEAVLSVAF-----SPDGRQLASGSGDTTVRLWDLNTQTPMFKC----TG 148
N+ + GH++ + + + +P+ R LAS S D ++R+WD T M +C TG
Sbjct: 202 NQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWD----TLMGRCDKILTG 257
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA 208
H V C+ W DG L S S+ ++ W Q G L GH W+ ++ ++
Sbjct: 258 HTQSVTCVKWGGDGL-LYSSSQDRTIKVWRSQDGILC-RTLQGHAHWVNTMALSTDYV-- 313
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLA-VTCVKWGGDGVIYTGSQDCTIKVWE 267
R A + +A I + + L V+ G + +GS D T+ +W
Sbjct: 314 -LR--TGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWR 370
Query: 268 TTQGKL-IRELKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPEEMKKAALERY---- 321
+ K + + GH +N + S + + A FD + K + +L +
Sbjct: 371 PAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAV 430
Query: 322 NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
+I +A RL VSGS D T+ +W+ A +K+ + GH V +SPDGQ VAS
Sbjct: 431 YQIAWSADSRLLVSGSSDSTLKVWD-AETKKLAIDLPGHADEVFATDWSPDGQRVASGGK 489
Query: 381 DKSIKLW 387
DK +++W
Sbjct: 490 DKCLRIW 496
Score = 160 (61.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 58/203 (28%), Positives = 89/203 (43%)
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNS 286
++ +C L GHT AV V + G + +GS D T++ W+ + KGH HWV S
Sbjct: 115 AVTRCTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLS 174
Query: 287 LALSTE-YALRTGA-------FDH-TGKQYSS--PEEMKKAALERYNKIKGNAPER-LVS 334
+A S + L +G +D TG Q K + + N R L S
Sbjct: 175 IAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLAS 234
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
S D ++ +W+ + + K +TGH Q V V + DG + S+S D++IK+W G
Sbjct: 235 ASKDGSIRIWDTLMGRCDKI-LTGHTQSVTCVKWGGDGL-LYSSSQDRTIKVWRSQDGIL 292
Query: 395 VAVFRGHVGPVYQIRFELIYCFR 417
+GH V + Y R
Sbjct: 293 CRTLQGHAHWVNTMALSTDYVLR 315
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 1220 (434.5 bits), Expect = 3.9e-124, P = 3.9e-124
Identities = 219/394 (55%), Positives = 292/394 (74%)
Query: 17 DPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKV 76
D E + G P+ QN +QL ++N LLNN+E+LPY+F+++D E+ L ++LE +
Sbjct: 51 DSENDTTGPPINISQNVTTEQLQMLINSLLNNDEQLPYSFFVNDQEITNNLKNHLEG--L 108
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
S E LSI YQPQAVFR+RPV RC+++++GHTEAVL+ AFSPDG+ S GDTTVR+WD
Sbjct: 109 SDETTLSIYYQPQAVFRVRPVTRCASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWD 168
Query: 137 LNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI 196
+ T TP GH NWVL +AWS D K + + G+++ W PQTGK G+ L GH K+I
Sbjct: 169 IYTSTPTHTLKGHTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFI 228
Query: 197 TGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT 256
TG+SWEP HLN C R S+SKD RIWD K ++ LSGHT++VTC+KWGG+G+IY+
Sbjct: 229 TGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEGLIYS 288
Query: 257 GSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKA 316
GSQD T++V+ TT G+L+R L GH HWVN+LAL+T+Y LRTG++DHTGK+Y + EE ++
Sbjct: 289 GSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDYVLRTGSYDHTGKEYDTLEEAQRV 348
Query: 317 ALERYNKIKGNAP--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQW 374
ALERYN +K + E L+SGSDDFT+ +W P+V+K +R+TGHQQL+N V FSPDG++
Sbjct: 349 ALERYNDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRY 408
Query: 375 VASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
ASASFDKSIKLW+G +GKF+ FRGHVG VYQ+
Sbjct: 409 FASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQV 442
Score = 290 (107.1 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 66/148 (44%), Positives = 90/148 (60%)
Query: 323 KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
K K E L+SGSDDFT+ +W P+V+K +R+TGHQQL+N V FSPDG++ ASASFDK
Sbjct: 357 KAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDK 416
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVYQIRF--ELIYCFRYPSNFYCVV-DMSC--------- 430
SIKLW+G +GKF+ FRGHVG VYQ+ + + Y + + D+
Sbjct: 417 SIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPG 476
Query: 431 -CMSLYS--WSADSRLLLSGSKDSTLKV 455
+Y+ WS D + SGSKD L++
Sbjct: 477 HADEVYTVDWSPDGDRVASGSKDRLLRI 504
Score = 231 (86.4 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 75/298 (25%), Positives = 140/298 (46%)
Query: 102 ATIAGHTEAVLSVAFSP---DGR--QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
+T+ GHT+ + +++ P + + +LAS S D+T+R+WD + + +GH V C+
Sbjct: 219 STLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCL 278
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
W +G + SGS+ ++ ++ G+ L GH W+ ++ ++ + R +
Sbjct: 279 KWGGEGL-IYSGSQDRTVRVFNTTDGRLV-RVLDGHAHWVNTLA---LNTDYVLR---TG 330
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL-IR 275
S D + +D + L + K G ++ +GS D T+ +W + K I
Sbjct: 331 SYDHTGKEYDTLEEAQRVALERYNDVKAKSK--GMEILISGSDDFTVIMWNPSVTKTSIS 388
Query: 276 ELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMK----KAALERYNKIKGNAPE 330
L GH +N ++ S + + +FD + K + + + ++ ++
Sbjct: 389 RLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDS 448
Query: 331 R-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
R LVSGS D T+ +W+ K K + GH V V +SPDG VAS S D+ +++W
Sbjct: 449 RYLVSGSKDSTLKIWDIKTKKMEK-ELPGHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 229 (85.7 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 85/320 (26%), Positives = 144/320 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSA- 160
T+ GHT VL VA+SPD +++A+ + +R+W T + GH ++ ++W
Sbjct: 177 TLKGHTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPF 236
Query: 161 --DGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ K L S SK ++ WD ++ K + LSGH +T + W L S
Sbjct: 237 HLNPKCVRLASSSKDSTIRIWDTESCKNLMS-LSGHTMSVTCLKWGGEGL------IYSG 289
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRE 276
S+D R+++ + + V L GH V + D V+ TGS D T K ++T +
Sbjct: 290 SQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDYVLRTGSYDHTGKEYDTLEEAQRVA 349
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-------NKIKGNAP 329
L+ + V + + E + +G+ D T ++ P + K ++ R N + +
Sbjct: 350 LERYND-VKAKSKGMEILI-SGSDDFTVIMWN-PS-VTKTSISRLTGHQQLINLVSFSPD 405
Query: 330 ER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
R S S D ++ LW+ K GH V V +S D +++ S S D ++K+W+
Sbjct: 406 GRYFASASFDKSIKLWDGQSGKF-LGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWD 464
Query: 389 GTTGKFVAVFRGHVGPVYQI 408
T K GH VY +
Sbjct: 465 IKTKKMEKELPGHADEVYTV 484
Score = 204 (76.9 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 47/124 (37%), Positives = 64/124 (51%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH + + V+FSPDGR AS S D +++LWD + + GH V + WS+D +
Sbjct: 390 LTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSR 449
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+LVSGSK L+ WD +T K L GH + + W P R S SKD R
Sbjct: 450 YLVSGSKDSTLKIWDIKTKKME-KELPGHADEVYTVDWSP-----DGDRVASGSKDRLLR 503
Query: 224 IWDV 227
IW V
Sbjct: 504 IWTV 507
Score = 157 (60.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 65/249 (26%), Positives = 115/249 (46%)
Query: 231 KCVICLSGHTLAV-TCV-KWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLA 288
+C +SGHT AV C G G + G D T+++W+ LKGH +WV +A
Sbjct: 131 RCASSMSGHTEAVLNCAFSPDGKGFVSVGG-DTTVRIWDIYTSTPTHTLKGHTNWVLQVA 189
Query: 289 LSTEYA-LRTGAFDHTGKQYSSPEEMKK--AALERYNK-IKGNAPE---------RLVSG 335
S + + T + + + P+ K+ + L+ + K I G + E RL S
Sbjct: 190 WSPDSKKIATAGMEGDIRIWC-PQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASS 248
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T+ +W+ K + ++GH V + + +G + S S D++++++N T G+ V
Sbjct: 249 SKDSTIRIWDTESCKNLMS-LSGHTMSVTCLKWGGEGL-IYSGSQDRTVRVFNTTDGRLV 306
Query: 396 AVFRGHVGPVYQIRFELIYCFR-----YPSNFYCVVDMSCCMSLYSWS---ADSR---LL 444
V GH V + Y R + Y ++ + ++L ++ A S+ +L
Sbjct: 307 RVLDGHAHWVNTLALNTDYVLRTGSYDHTGKEYDTLEEAQRVALERYNDVKAKSKGMEIL 366
Query: 445 LSGSKDSTL 453
+SGS D T+
Sbjct: 367 ISGSDDFTV 375
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 1208 (430.3 bits), Expect = 7.2e-123, P = 7.2e-123
Identities = 217/366 (59%), Positives = 270/366 (73%)
Query: 49 EEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHT 108
E+ LP AFY+ D E+ LG LE V EKVL I+YQPQA+FR+R V RC++++ GH+
Sbjct: 6 EDPLPLAFYVHDAEITSSLGKTLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHS 65
Query: 109 EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSG 168
EAV+SVAFSP G+ LASGSGDTTVR WDL+T+TP F C GH++WVL I+WS DGK L SG
Sbjct: 66 EAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTLASG 125
Query: 169 SKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVS 228
K G++ WDP TGK G L+GH KWITG+SWEP+H N CR S+SKDG R+WD +
Sbjct: 126 CKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTT 185
Query: 229 LRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLA 288
+C L+GHT +VTC++WGGDG++Y+ SQD TIKVW G L R L+GHGHWVN++A
Sbjct: 186 AGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMA 245
Query: 289 LSTEYALRTGAFDHTGKQYS------SPEEMKKAALERYNKIKGNAPERLVSGSDDFTMF 342
LST+YALRTGAF+ + S +E+K AL RYN ++G PERLVSGSDDFT+F
Sbjct: 246 LSTDYALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVRGQGPERLVSGSDDFTLF 305
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
+W PA K+P RMTGHQ L+N V FSPD + +ASASFDKSIKLW+G TGK++A RGHV
Sbjct: 306 MWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHV 365
Query: 403 GPVYQI 408
VYQI
Sbjct: 366 AAVYQI 371
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 78/162 (48%), Positives = 99/162 (61%)
Query: 309 SPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYF 368
S +E+K AL RYN ++G PERLVSGSDDFT+F+W PA K+P RMTGHQ L+N V F
Sbjct: 272 SLQELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLF 331
Query: 369 SPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE----LIYCFRYPSNF-- 422
SPD + +ASASFDKSIKLW+G TGK++A RGHV VYQI + L+ S
Sbjct: 332 SPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKV 391
Query: 423 YCVVDMSCCMSL-------YS--WSADSRLLLSGSKDSTLKV 455
+ V L Y+ WS D + + SG KD L++
Sbjct: 392 WDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRI 433
Score = 266 (98.7 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 89/324 (27%), Positives = 148/324 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAW--- 158
T GH VLS+++SPDG+ LASG + + LWD +T + + GH W+ ++W
Sbjct: 102 TCQGHRHWVLSISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPL 161
Query: 159 --SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ + +++ S SK G ++ WD G+ L+GH + +T + W L SA
Sbjct: 162 HANPECRYMASSSKDGSVRVWDTTAGRCE-RILTGHTQSVTCLRWGGDGL------LYSA 214
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIYTGS---QDCTIKVWETTQG 271
S+D ++W V+C L GH V + D + TG+ + +I + QG
Sbjct: 215 SQDRTIKVWRA--HDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASINA-QDLQG 271
Query: 272 KLIRELKGHG-HWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER-----YNKIK 325
L +ELK N + L +G+ D T +S E+ K A N++
Sbjct: 272 SL-QELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVL 330
Query: 326 GNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+ R++ S S D ++ LW+ K + + GH V + +S D + + S S D ++
Sbjct: 331 FSPDSRIIASASFDKSIKLWDGRTGKYLAS-LRGHVAAVYQIAWSADSRLLVSGSSDSTL 389
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQI 408
K+W+ K A GH VY +
Sbjct: 390 KVWDVKAQKLAADLPGHADEVYAV 413
Score = 240 (89.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 82/297 (27%), Positives = 132/297 (44%)
Query: 104 IAGHTEAVLSVAF-----SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+AGH++ + +++ +P+ R +AS S D +VR+WD TGH V C+ W
Sbjct: 146 LAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRW 205
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG L S S+ ++ W G L GH W+ ++ L+ A +
Sbjct: 206 GGDGL-LYSASQDRTIKVWRAHDGVLC-RTLQGHGHWVNTMA-----LSTDYALRTGAFE 258
Query: 219 DGDARIWDVSLRKCVICLSGHTLA-VTCVKWGGDGVIYTGSQDCTIKVWETTQGKL-IRE 276
+A I L+ + L L V+ G + +GS D T+ +W + K +
Sbjct: 259 PAEASINAQDLQGSLQELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLAR 318
Query: 277 LKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPEEMKKAALERY----NKIKGNAPER 331
+ GH +N + S + + A FD + K + A+L + +I +A R
Sbjct: 319 MTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 378
Query: 332 L-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
L VSGS D T+ +W+ K + GH V V +SPDGQ VAS DK +++W
Sbjct: 379 LLVSGSSDSTLKVWDVKAQKLAAD-LPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 197 (74.4 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 47/124 (37%), Positives = 62/124 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A + GH + V FSPD R +AS S D +++LWD T + GH V IAWSAD
Sbjct: 317 ARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSAD 376
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ LVSGS L+ WD + K + + L GH + + W P +R S KD
Sbjct: 377 SRLLVSGSSDSTLKVWDVKAQKLAAD-LPGHADEVYAVDWSP-----DGQRVASGGKDKC 430
Query: 222 ARIW 225
RIW
Sbjct: 431 LRIW 434
Score = 120 (47.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 38/145 (26%), Positives = 73/145 (50%)
Query: 277 LKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALE--RYNKIKGN-APE-- 330
L+GH V S+A S T L +G+ D T + + E + R+ + + +P+
Sbjct: 61 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 120
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV-----YFSPDGQWVASASFDKSIK 385
L SG + + LW+P+ KQ + GH + + + + +P+ +++AS+S D S++
Sbjct: 121 TLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVR 180
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRF 410
+W+ T G+ + GH V +R+
Sbjct: 181 VWDTTAGRCERILTGHTQSVTCLRW 205
Score = 45 (20.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 437 WSADSRLLLSGSKDSTLKV 455
W D LL S S+D T+KV
Sbjct: 205 WGGDG-LLYSASQDRTIKV 222
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 1132 (403.5 bits), Expect = 8.2e-115, P = 8.2e-115
Identities = 214/415 (51%), Positives = 279/415 (67%)
Query: 2 EIETE---TTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYI 58
E +TE T + + L G G P+ P QQL I N LL NEE PY F++
Sbjct: 10 ETDTEQEATPHTIQARLVSDTGEEAGPPIDLPAGITTQQLGLICNALLKNEEATPYLFFV 69
Query: 59 SDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSP 118
+ E+ L L+ V E V+ IVYQPQAVF++RPV RC++++ GH EAV+S+ FSP
Sbjct: 70 GEDEIKKSLEDTLDLASVDTENVIDIVYQPQAVFKVRPVTRCTSSMPGHAEAVVSLNFSP 129
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
DG LASGSGDTTVRLWDLNT+TP F CTGHK WVLC++W+ DGK L SG KAG + WD
Sbjct: 130 DGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRLASGCKAGSIIIWD 189
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSG 238
P+TG+ G PLSGHKK I ++WEP H + CR+ SAS DGD RIWDV L +C++ ++G
Sbjct: 190 PETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAG 249
Query: 239 HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTG 298
HT AVT V+WGG G+IYT S+D T+K+W G L R GH HWVN++ALST+Y LRTG
Sbjct: 250 HTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTG 309
Query: 299 AF----DHTGKQYS-SPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPK 353
F D + S S EE++++AL+RY + + E LVS SDD T++LW +K +
Sbjct: 310 PFHPVKDRSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVE 369
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
RMTGHQ +VN V +SPD + +ASASFDKS++LW + G+++A FRGHV VY +
Sbjct: 370 -RMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTV 423
Score = 246 (91.7 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 61/162 (37%), Positives = 89/162 (54%)
Query: 309 SPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYF 368
S EE++++AL+RY + + E LVS SDD T++LW +K + RMTGHQ +VN V +
Sbjct: 325 STEELQESALKRYQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVE-RMTGHQNVVNDVKY 383
Query: 369 SPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE----LIYCFRYPSNF-- 422
SPD + +ASASFDKS++LW + G+++A FRGHV VY + + LI S
Sbjct: 384 SPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKV 443
Query: 423 YCVVDMSCCMSL---------YSWSADSRLLLSGSKDSTLKV 455
+ V L W+ D + SG KD +K+
Sbjct: 444 WSVQTKKLAQELPGHADEVFGVDWAPDGSRVASGGKDKVIKL 485
Score = 232 (86.7 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 81/302 (26%), Positives = 128/302 (42%)
Query: 104 IAGHTEAVLSVAFSP-----DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
++GH + + +A+ P + R+LAS SGD R+WD+ + GH N V + W
Sbjct: 200 LSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRW 259
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI--SWEPVHLNAPCRRFVSA 216
G + + SK ++ W G SGH W+ I S + V P
Sbjct: 260 GGAGL-IYTSSKDRTVKMWRAADGILC-RTFSGHAHWVNNIALSTDYVLRTGPFHPVKDR 317
Query: 217 SKD----GDARIWDVSLRKC-VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
SK + + +L++ +C V+C S D T+ +W Q
Sbjct: 318 SKSHLSLSTEELQESALKRYQAVCPDEVESLVSC------------SDDNTLYLWRNNQN 365
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPEEMKKAALERYNK----IKG 326
K + + GH + VN + S + L A FD + + + + + A + + +
Sbjct: 366 KCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAW 425
Query: 327 NAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+A RL VSGS D T+ +W K + + GH V V ++PDG VAS DK IK
Sbjct: 426 SADSRLIVSGSKDSTLKVWSVQTKKLAQ-ELPGHADEVFGVDWAPDGSRVASGGKDKVIK 484
Query: 386 LW 387
LW
Sbjct: 485 LW 486
Score = 203 (76.5 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 47/128 (36%), Positives = 62/128 (48%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
N+C + GH V V +SPD + +AS S D +VRLW + M GH V +A
Sbjct: 365 NKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVA 424
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
WSAD + +VSGSK L+ W QT K L GH + G+ W P R S
Sbjct: 425 WSADSRLIVSGSKDSTLKVWSVQT-KKLAQELPGHADEVFGVDWAP-----DGSRVASGG 478
Query: 218 KDGDARIW 225
KD ++W
Sbjct: 479 KDKVIKLW 486
Score = 138 (53.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 55/216 (25%), Positives = 90/216 (41%)
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
+C + GH AV + + DG + +GS D T+++W+ GH WV ++
Sbjct: 110 RCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSW 169
Query: 290 STE-YALRTGA-------FD-HTGKQYSSP-----EEMKKAALERYNKIKGNAPE--RLV 333
+ + L +G +D TG+Q P + + A E Y++ PE +L
Sbjct: 170 APDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHR----DPECRKLA 225
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
S S D +W+ + Q + GH V V + G + ++S D+++K+W G
Sbjct: 226 SASGDGDCRIWDVKLG-QCLMNIAGHTNAVTAVRWGGAGL-IYTSSKDRTVKMWRAADGI 283
Query: 394 FVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMS 429
F GH V I Y R F+ V D S
Sbjct: 284 LCRTFSGHAHWVNNIALSTDYVLR-TGPFHPVKDRS 318
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 199/412 (48%), Positives = 275/412 (66%)
Query: 5 TETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLL-NNEEKLPYAFYISDH-E 62
TE+ + +++ E G+ + P + +L + N+LL ++++ +P +F+ ++ E
Sbjct: 2 TESPQISVSFVSEDENELGGSGILVPVDISTNELQILCNQLLGSSDDPVPISFFTTEGAE 61
Query: 63 LLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQ 122
++ + LE+ + E L +VYQPQAVFR+RPV RCSA+I GH E V+S FSPDGR
Sbjct: 62 IVDSIRKSLEE--IDFETTLKLVYQPQAVFRVRPVTRCSASIPGHGEPVISAQFSPDGRG 119
Query: 123 LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTG 182
LASGSGD T+R+WD+ + P+ C HK+WVLCIAWS D + S K GE+ W+ +TG
Sbjct: 120 LASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTG 179
Query: 183 KPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLA 242
+ G L HK+WIT ++W+P+H + CR S KDG+ IWD V CLSGHT +
Sbjct: 180 EQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTVVRCLSGHTAS 239
Query: 243 VTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDH 302
VTC++WGG+G+IY+GSQD T+K+W G + R + GH HW+N+LAL+T+YALRT F+
Sbjct: 240 VTCLRWGGEGLIYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLALNTDYALRTSCFEP 299
Query: 303 TGKQYSSP---EEMKKAALERYN---KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
+ K+ P EE +K A RY +I G ERLVSGSDDFT+F+W P +KQ RM
Sbjct: 300 S-KRCIKPDTVEECQKVAQTRYEAALEIAGG--ERLVSGSDDFTLFMWNPKETKQSINRM 356
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
TGH QLVN V FSPD +++ASASFDKS+KLW G TGK++A RGHVGPVYQ+
Sbjct: 357 TGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQV 408
Score = 321 (118.1 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 73/163 (44%), Positives = 96/163 (58%)
Query: 311 EEMKKAALERYN---KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY 367
EE +K A RY +I G ERLVSGSDDFT+F+W P +KQ RMTGH QLVN V
Sbjct: 310 EECQKVAQTRYEAALEIAGG--ERLVSGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVV 367
Query: 368 FSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFEL--------------- 412
FSPD +++ASASFDKS+KLW G TGK++A RGHVGPVYQ+ +
Sbjct: 368 FSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSRLLVSGSADSTLK 427
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
++ + S +Y + + WS + ++SG KD LK+
Sbjct: 428 VFELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGKDKVLKL 470
Score = 216 (81.1 bits), Expect = 8.4e-15, P = 8.4e-15
Identities = 83/300 (27%), Positives = 138/300 (46%)
Query: 103 TIAGHTEAVLSVAFSP---DG--RQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCI 156
T+ H + + S+A+ P D R LAS D + +WD Q + +C +GH V C+
Sbjct: 185 TLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWD-TVQGTVVRCLSGHTASVTCL 243
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
W +G + SGS+ ++ W G N ++GH WI ++ LN S
Sbjct: 244 RWGGEGL-IYSGSQDRTVKMWRADDGVMCRN-MTGHAHWINTLA-----LNTDYALRTSC 296
Query: 217 SKDGDARIWDVSLRKCV-ICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL-I 274
+ I ++ +C + + + A+ GG+ ++ +GS D T+ +W + K I
Sbjct: 297 FEPSKRCIKPDTVEECQKVAQTRYEAALEIA--GGERLV-SGSDDFTLFMWNPKETKQSI 353
Query: 275 RELKGHGHWVNSLALS--TEYALRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGNA 328
+ GH VN + S T Y + + +FD + K + A+L + ++ +A
Sbjct: 354 NRMTGHMQLVNQVVFSPDTRY-IASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSA 412
Query: 329 PERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
RL VSGS D T+ ++E +K + GH V V +SP+G V S DK +KLW
Sbjct: 413 DSRLLVSGSADSTLKVFE-LKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGKDKVLKLW 471
Score = 162 (62.1 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 77/325 (23%), Positives = 136/325 (41%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG-HKNWVLCIAWSAD 161
T H VL +A+SPD ++AS + + +W+ T + K HK W+ +AW
Sbjct: 142 TCKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPM 201
Query: 162 GKH-----LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
K L S K G + WD G LSGH +T + W L S
Sbjct: 202 HKDPTCRLLASCGKDGNIFIWDTVQGTVV-RCLSGHTASVTCLRWGGEGL------IYSG 254
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIYTG----SQDCTIKVWETTQ 270
S+D ++W V+C ++GH + + D + T S+ C IK +
Sbjct: 255 SQDRTVKMWRAD--DGVMCRNMTGHAHWINTLALNTDYALRTSCFEPSKRC-IKPDTVEE 311
Query: 271 GKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAA------LERYNKI 324
+ + + + + +L ++ L +G+ D T ++ P+E K++ ++ N++
Sbjct: 312 CQKVAQTR----YEAALEIAGGERLVSGSDDFTLFMWN-PKETKQSINRMTGHMQLVNQV 366
Query: 325 KGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ R + S S D ++ LW K + + GH V V +S D + + S S D +
Sbjct: 367 VFSPDTRYIASASFDKSVKLWCGRTGKYLAS-LRGHVGPVYQVAWSADSRLLVSGSADST 425
Query: 384 IKLWNGTTGKFVAVFRGHVGPVYQI 408
+K++ T GH V+ +
Sbjct: 426 LKVFELKTKSLYYDLPGHGDEVFTV 450
Score = 148 (57.2 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A++ GH V VA+S D R L SGS D+T+++++L T++ + GH + V + WS +
Sbjct: 396 ASLRGHVGPVYQVAWSADSRLLVSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPE 455
Query: 162 GKHLVSGSKAGELQCW 177
G +VSG K L+ W
Sbjct: 456 GTKVVSGGKDKVLKLW 471
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 1033 (368.7 bits), Expect = 2.5e-104, P = 2.5e-104
Identities = 195/401 (48%), Positives = 268/401 (66%)
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPD-GRQLASGSGDTTVRLW 135
S E ++++Y P+AVF+++PV R S+ IAGH +L AF+P ++ +G+GD T R+W
Sbjct: 112 STEDQITLLYTPRAVFKVKPVTRSSSAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIW 171
Query: 136 DLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKW 195
D +TQTPM GH NWVLC++WS DG+ + +GS ++ WDP++G+ G+ L GH KW
Sbjct: 172 DCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKW 231
Query: 196 ITGISWEPVHLNAPCR--RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV 253
IT +SWEP+HL P R S+SKDG +IWD R C +SGHT +V+CVKWGG G+
Sbjct: 232 ITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGL 291
Query: 254 IYTGSQDCTIKVWE-TTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
+Y+GS D T++VW+ +QG+ I LK H HWVN L+LST+YALR GAFDHTGK+ S+PEE
Sbjct: 292 LYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEE 351
Query: 313 MKKAALERYNKI---KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFS 369
+K ALE Y KI GN+ E +V+ SDD+TMFLW P S +P RMTGHQ+LVNHV FS
Sbjct: 352 AQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFS 411
Query: 370 PDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRYPS-NFY 423
PDG+++ SASFD SIKLW+G GKF++ FRGHV VYQ+ + L+ C + + +
Sbjct: 412 PDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVW 471
Query: 424 CVVDMSCCMSL-------YS--WSADSRLLLSGSKDSTLKV 455
V + L Y+ WS D + + SG KD +++
Sbjct: 472 DVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRL 512
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 106/264 (40%), Positives = 162/264 (61%)
Query: 20 GNPLGAPMYFPQNAGPQQLSQIVNKLLN-NEEKLPYAFYI-------SDHELLVPLGSYL 71
G+ +G + P +QL +++N+L +++ +PY F SD + + L
Sbjct: 42 GDNVGGALRVPGAISEKQLEELLNQLNGTSDDPVPYTFSCTIQGKKASDPVKTIDITDNL 101
Query: 72 EKHKV-----SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPD-GRQLAS 125
+ S E ++++Y P+AVF+++PV R S+ IAGH +L AF+P ++ +
Sbjct: 102 YSSLIKPGYNSTEDQITLLYTPRAVFKVKPVTRSSSAIAGHGSTILCSAFAPHTSSRMVT 161
Query: 126 GSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPS 185
G+GD T R+WD +TQTPM GH NWVLC++WS DG+ + +GS ++ WDP++G+
Sbjct: 162 GAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCL 221
Query: 186 GNPLSGHKKWITGISWEPVHLNAPCR--RFVSASKDGDARIWDVSLRKCVICLSGHTLAV 243
G+ L GH KWIT +SWEP+HL P R S+SKDG +IWD R C +SGHT +V
Sbjct: 222 GDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSV 281
Query: 244 TCVKWGGDGVIYTGSQDCTIKVWE 267
+CVKWGG G++Y+GS D T++VW+
Sbjct: 282 SCVKWGGQGLLYSGSHDRTVRVWD 305
Score = 207 (77.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 76/300 (25%), Positives = 128/300 (42%)
Query: 104 IAGHTEAVLSVAFSP-----DGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
+ GH++ + S+++ P G + LAS S D T+++WD ++ + +GH N V C+
Sbjct: 225 LRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCV 284
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
W G L SGS ++ WD + N L H W+ +S + R +
Sbjct: 285 KWGGQGL-LYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDY----ALRIGAF 339
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQG-KLI 274
G +K + C K G + ++ T S D T+ +W + K I
Sbjct: 340 DHTGKKPSTPEEAQKKAL----ENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPI 395
Query: 275 RELKGHGHWVNSLALSTE--YALRTGAFDHTGKQYSSPE-----EMKKAALERYNKIKGN 327
+ GH VN +A S + Y + + +FD++ K + + + Y +
Sbjct: 396 ARMTGHQKLVNHVAFSPDGRYIV-SASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSS 454
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
LVS S D T+ +W+ K + GH+ V V +S DG+ V S DK ++LW
Sbjct: 455 DCRLLVSCSKDTTLKVWDVRTRKL-SVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 155 (59.6 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
+T GH +V VA+S D R L S S DTT+++WD+ T+ GHK+ V + WS D
Sbjct: 438 STFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVD 497
Query: 162 GKHLVSGSKAGELQCW 177
GK + SG K ++ W
Sbjct: 498 GKRVCSGGKDKMVRLW 513
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 916 (327.5 bits), Expect = 6.3e-92, P = 6.3e-92
Identities = 199/458 (43%), Positives = 266/458 (58%)
Query: 20 GNPLGAPMYFP-QNAGPQQLSQIVNKLLNNEE--KLPYAF-YISDH---------ELLVP 66
G+ G + P +A + L ++N L NEE ++PY F + SD ++L
Sbjct: 46 GSATGPAVSVPVADATVKNLETLLNTLQGNEEDERVPYRFTFQSDDKDSKDSQTIDILAD 105
Query: 67 LGSYLEKHKV-SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSP-DGRQLA 124
+ L K V + E + + + PQA+FR++ V+RCSA+IAGH EA+L+ +FSP +
Sbjct: 106 IYHSLLKPGVKTTEDTIQLYFTPQAIFRVKAVSRCSASIAGHGEAILATSFSPVSSSTMV 165
Query: 125 SGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKP 184
SGSGD+T R+WD +T TP+ GH +WVL +++S +G + +GS ++ WD + G+
Sbjct: 166 SGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQA 225
Query: 185 SGNPLSGHKKWITGISWEPVHLNAPCR-RFVSASKDGDARIWDVSLRKCVICLSGHTLAV 243
G PL GH KWIT ++WEP HL R SASKD RIWDV ++ I LSGH +V
Sbjct: 226 LGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSV 285
Query: 244 TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHT 303
TCV+WGG G IYT S D TIKVW + G LI+ L H H VN LALST++ LRT DHT
Sbjct: 286 TCVRWGGTGKIYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHT 345
Query: 304 GKQYSSPEEMKKAALERYNK---IKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQ 360
GK S + A +R+ K I E+LVS SDDFTM+LW+P S +P R+ GHQ
Sbjct: 346 GKVPESDADKVAMAKKRFEKAATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQ 405
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPS 420
+ VNHV FSPD ++ASA FD +KLWNG GKF+ RGHVG VYQ CF S
Sbjct: 406 KEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQC------CFSADS 459
Query: 421 NFYCVVDMSCCMSLYSWSADSRLL---LSGSKDSTLKV 455
+V S +L W+ + L L G KD V
Sbjct: 460 RL--LVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAV 495
Score = 272 (100.8 bits), Expect = 4.3e-21, P = 4.3e-21
Identities = 63/158 (39%), Positives = 83/158 (52%)
Query: 313 MKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
M K E+ I E+LVS SDDFTM+LW+P S +P R+ GHQ+ VNHV FSPD
Sbjct: 358 MAKKRFEKAATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDM 417
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRYPS-NFYCVV 426
++ASA FD +KLWNG GKF+ RGHVG VYQ F L+ + + + V
Sbjct: 418 AYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVR 477
Query: 427 DMSCCMSL---------YSWSADSRLLLSGSKDSTLKV 455
L WS D + + SG KD +++
Sbjct: 478 TGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRI 515
Score = 228 (85.3 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 83/301 (27%), Positives = 137/301 (45%)
Query: 102 ATIAGHTEAVLSVAFSP-----DGR-QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
A + GH + + S+A+ P G +LAS S D+TVR+WD+ ++ +GHK V C
Sbjct: 228 APLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTC 287
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV- 214
+ W GK + + S ++ W+ QTG LS H + HL A F+
Sbjct: 288 VRWGGTGK-IYTSSHDRTIKVWNSQTGTLI-QTLSAHAHRVN-------HL-ALSTDFIL 337
Query: 215 -SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWET-TQGK 272
+A D ++ + K + A T + ++ + S D T+ +W+ + K
Sbjct: 338 RTAYHDHTGKVPESDADKVAMAKKRFEKAATINNKIVEKLV-SASDDFTMYLWDPESSSK 396
Query: 273 LIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGN 327
+ L GH VN + S + A + + FD+ K ++ + L + + +
Sbjct: 397 PVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFS 456
Query: 328 APERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
A RL VS S D T+ +W K + + GH+ V V +SPDGQ V S DK+I++
Sbjct: 457 ADSRLLVSSSKDTTLKVWNVRTGKLSED-LPGHKDEVFAVDWSPDGQKVGSGGKDKAIRI 515
Query: 387 W 387
W
Sbjct: 516 W 516
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 908 (324.7 bits), Expect = 4.5e-91, P = 4.5e-91
Identities = 181/408 (44%), Positives = 253/408 (62%)
Query: 10 NVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLL-NNEEKLPYAFYISDHELLVPLG 68
NV +D + N L A + P N+ +QL ++N+LL N+++ +PY F + + + +
Sbjct: 32 NVQFRASD-DSNEL-ASLLVPGNSSVRQLEALLNQLLENSDDPVPYNFALHHEDETIEIQ 89
Query: 69 SYLEK---HK--VSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPD-GRQ 122
L H + E L+++Y PQAVFR+R V RC+A++ GH ++S FSP +
Sbjct: 90 DNLYTSVFHNGLMKTEDHLTLLYTPQAVFRVRAVTRCTASMNGHDGTIISAQFSPSTSSR 149
Query: 123 LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTG 182
L +GSGD T RLWD +TQTP+ GH NWV C+AW+ D + +GS ++ WDP+ G
Sbjct: 150 LVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKG 209
Query: 183 KPSGNPLSGHKKWITGISWEPVHLNAPCRRFV--SASKDGDARIWDVSLRKCVICLSGHT 240
P G+ L H K I + W+P+HL ++ S SKD RIW+V LR + LSGHT
Sbjct: 210 SPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHT 269
Query: 241 LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF 300
+TCV+WGG IY+ S D TI++W+ GK + LKGH VN L+LSTE+ LR+GA+
Sbjct: 270 APITCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAY 329
Query: 301 DHTG-KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGH 359
DHT K S +E +KA ERY + ERLVS SDD + LW+P S +P T+M GH
Sbjct: 330 DHTDFKPKSFSDERRKAK-ERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGH 388
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
Q++VNH FSPDG+ +A+ASFD S++LW+G TGKF+A RGHV VYQ
Sbjct: 389 QKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQ 436
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 110/257 (42%), Positives = 150/257 (58%)
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLI 274
S SKD RIW+V LR + LSGHT +TCV+WGG IY+ S D TI++W+ GK +
Sbjct: 244 SGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSSYDKTIRIWDAKDGKCL 303
Query: 275 RELKGHGHWVNSLALSTEYALRTGAFDHTG-KQYSSPEEMKKAALERYNKIKGNAPERLV 333
LKGH VN L+LSTE+ LR+GA+DHT K S +E +KA ERY + ERLV
Sbjct: 304 HILKGHAARVNHLSLSTEHVLRSGAYDHTDFKPKSFSDERRKAK-ERYEACLKQSGERLV 362
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
S SDD + LW+P S +P T+M GHQ++VNH FSPDG+ +A+ASFD S++LW+G TGK
Sbjct: 363 SASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGK 422
Query: 394 FVAVFRGHVGPVYQIRFEL---------------IYCFRYPSNFYCVVDMSCCMSLYSWS 438
F+A RGHV VYQ + ++ R + + + WS
Sbjct: 423 FLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWS 482
Query: 439 ADSRLLLSGSKDSTLKV 455
D + + SG D +++
Sbjct: 483 PDGQRVASGGADKAVRI 499
Score = 241 (89.9 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 79/296 (26%), Positives = 137/296 (46%)
Query: 107 HTEAVLSVAF-----SPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
HT+ ++++ + +PD LASGS D TVR+W++ +T +F +GH + C+ W
Sbjct: 219 HTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWG 278
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+ S S ++ WD + GK + L GH + +S H+ R D
Sbjct: 279 GQN-WIYSSSYDKTIRIWDAKDGKCL-HILKGHAARVNHLSLSTEHV---LRSGAYDHTD 333
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG-KLIRELK 278
+ + RK C+K G+ ++ + S D + +W+ + K I ++
Sbjct: 334 FKPKSFSDERRKA------KERYEACLKQSGERLV-SASDDLQLILWDPQKSTKPITKMH 386
Query: 279 GHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGNAPERL- 332
GH VN + S + + T +FD + + + A L + + + RL
Sbjct: 387 GHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLL 446
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
VS S D T+ +W+ SK+ K + GH+ V V +SPDGQ VAS DK++++W+
Sbjct: 447 VSSSQDTTLKVWDVR-SKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 213 (80.0 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 85/323 (26%), Positives = 141/323 (43%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG-HKNWVLCIAWSA 160
AT+ GHT V VA++PD +A+GS D T+R WD +P+ H ++ + W
Sbjct: 171 ATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQP 230
Query: 161 ------DGKHLV-SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
G +L+ SGSK ++ W+ + + LSGH IT + W +
Sbjct: 231 LHLAPDSGPYLLASGSKDNTVRIWNVKL-RTLLFTLSGHTAPITCVRWGGQNW------I 283
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCT-IKVWETTQGK 272
S+S D RIWD KC+ L GH V + + V+ +G+ D T K + +
Sbjct: 284 YSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAYDHTDFKPKSFSDER 343
Query: 273 LIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKK--AALERYNKIKGNA-- 328
R+ K + L S E + A D P++ K + + K+ +A
Sbjct: 344 --RKAKER--YEACLKQSGERLV--SASDDLQLILWDPQKSTKPITKMHGHQKVVNHASF 397
Query: 329 -PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
P+ + + S D ++ LW+ K T + GH V +S D + + S+S D ++K
Sbjct: 398 SPDGRCIATASFDSSVRLWDGKTGKFLAT-LRGHVAAVYQCAWSTDSRLLVSSSQDTTLK 456
Query: 386 LWNGTTGKFVAVFRGHVGPVYQI 408
+W+ + K GH V+ +
Sbjct: 457 VWDVRSKKMKFDLPGHEDQVFAV 479
Score = 185 (70.2 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 48/142 (33%), Positives = 71/142 (50%)
Query: 84 IVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPM 143
I++ PQ +P+ + + GH + V +FSPDGR +A+ S D++VRLWD T +
Sbjct: 371 ILWDPQK--STKPITK----MHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFL 424
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
GH V AWS D + LVS S+ L+ WD ++ K + L GH+ + + W P
Sbjct: 425 ATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFD-LPGHEDQVFAVDWSP 483
Query: 204 VHLNAPCRRFVSASKDGDARIW 225
+R S D RIW
Sbjct: 484 -----DGQRVASGGADKAVRIW 500
Score = 177 (67.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 52/208 (25%), Positives = 99/208 (47%)
Query: 228 SLRKCVICLSGHTLAVTCVKWGGD--GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
++ +C ++GH + ++ + TGS D T ++W+ I +KGH +WV+
Sbjct: 122 AVTRCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVS 181
Query: 286 SLALSTEYAL-RTGAFDHTGKQYSSPEEMKKA--ALERYNK------------IKGNAPE 330
+A + + ++ TG+ D+T + + P++ AL R+ K + P
Sbjct: 182 CVAWAPDASIIATGSMDNTIR-FWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPY 240
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ-WVASASFDKSIKLWNG 389
L SGS D T+ +W + T ++GH + V + GQ W+ S+S+DK+I++W+
Sbjct: 241 LLASGSKDNTVRIWNVKLRTLLFT-LSGHTAPITCVRWG--GQNWIYSSSYDKTIRIWDA 297
Query: 390 TTGKFVAVFRGHVGPVYQIRFELIYCFR 417
GK + + +GH V + + R
Sbjct: 298 KDGKCLHILKGHAARVNHLSLSTEHVLR 325
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
Identities = 178/374 (47%), Positives = 232/374 (62%)
Query: 48 NEEKLPYAFYISDHELLVPLGSYLEKHKV--SVEKVLSIVYQPQAVFRIRPVNRCSATIA 105
N+E++ Y SD LG+ L +H + + E L++ +PQAVF+++ V+R + I
Sbjct: 96 NKEEIVIDSYPSD------LGALLRQHGIEDAFETTLTLAAEPQAVFKVQAVSRLAHRIP 149
Query: 106 GHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
GH E +L FSP +LA+GSGD T R+WD T TP GH WVL ++WS DG
Sbjct: 150 GHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTR 209
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL-NAPCRRFVSASKDGDAR 223
L + S ++ WDP+TGK G+ L GH KW+ GI+WEP+HL R VSASKD AR
Sbjct: 210 LATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTAR 269
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWG---GDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
IW V+ + LSGH +V+CV+WG G GV+YT S D T+KVW+ +G L+ +LK H
Sbjct: 270 IWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLLHDLKSH 329
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNK---IKGNAPERLVSGSD 337
HWVN LALST++ RTG FDHT ++ EE A ERY K + G ERLVS SD
Sbjct: 330 AHWVNHLALSTDFVCRTGFFDHTKTVPATAEEKTAKAKERYEKAARVGGKIVERLVSASD 389
Query: 338 DFTMFLWEPAVS-KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA 396
DFTM+L++P +P RM GHQ+ VNHV FSPDG +ASA +D + KLWN GKF+
Sbjct: 390 DFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFIN 449
Query: 397 VFRGHVGPVYQIRF 410
RGHV PVYQ F
Sbjct: 450 TLRGHVAPVYQCSF 463
Score = 248 (92.4 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 61/157 (38%), Positives = 83/157 (52%)
Query: 315 KAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVS-KQPKTRMTGHQQLVNHVYFSPDGQ 373
K E+ ++ G ERLVS SDDFTM+L++P +P RM GHQ+ VNHV FSPDG
Sbjct: 367 KERYEKAARVGGKIVERLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGS 426
Query: 374 WVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRYPS-NFYCVVD 427
+ASA +D + KLWN GKF+ RGHV PVYQ F L+ + + + V
Sbjct: 427 MIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRT 486
Query: 428 MSCCMSL-------YS--WSADSRLLLSGSKDSTLKV 455
L Y WS D + + SG +D +++
Sbjct: 487 GKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRL 523
Score = 248 (92.4 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 94/323 (29%), Positives = 139/323 (43%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPM-FKCTGHKNWVLCIAWSA- 160
T+ GH VL V++SPDG +LA+ S D TVR+WD T + + GH WV IAW
Sbjct: 190 TLKGHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPL 249
Query: 161 ----DGK-HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
DG LVS SK + W TG+ + LSGHK ++ + W + +
Sbjct: 250 HLWRDGTPRLVSASKDFTARIWTVNTGRTE-HVLSGHKGSVSCVRWGAGNGTGVV---YT 305
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
AS D ++WD + L H V + D V TG D T V T + K +
Sbjct: 306 ASHDKTVKVWDAVKGTLLHDLKSHAHWVNHLALSTDFVCRTGFFDHTKTVPATAEEKTAK 365
Query: 276 ELKGH-------GHWVNSL-ALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN 327
+ + G V L + S ++ + FD + P ++ N + +
Sbjct: 366 AKERYEKAARVGGKIVERLVSASDDFTMYL--FDPLNDG-TKPIARMIGHQKQVNHVTFS 422
Query: 328 APERLVS--GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+++ G D+ T LW K T + GH V FS D + + +AS D ++K
Sbjct: 423 PDGSMIASAGWDNATK-LWNARDGKFINT-LRGHVAPVYQCSFSADSRLLVTASKDTTLK 480
Query: 386 LWNGTTGKFVAVFRGHVGPVYQI 408
+WN TGK GH VY +
Sbjct: 481 VWNVRTGKLATDLPGHEDEVYGV 503
Score = 198 (74.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 81/303 (26%), Positives = 135/303 (44%)
Query: 104 IAGHTEAVLSVAFSP-----DGR-QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
+ GH + V +A+ P DG +L S S D T R+W +NT +GHK V C+
Sbjct: 234 LKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVR 293
Query: 158 WSA-DGKHLV-SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR-FV 214
W A +G +V + S ++ WD G + L H W+ ++ + + CR F
Sbjct: 294 WGAGNGTGVVYTASHDKTVKVWDAVKGTLL-HDLKSHAHWVNHLA---LSTDFVCRTGFF 349
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV--IYTGSQDCTIKVWET-TQG 271
+K A + K + A + GG V + + S D T+ +++ G
Sbjct: 350 DHTKTVPA----TAEEKTAKAKERYEKAA---RVGGKIVERLVSASDDFTMYLFDPLNDG 402
Query: 272 -KLIRELKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPE----EMKKAALERYNKIK 325
K I + GH VN + S + ++ A +D+ K +++ + + + +
Sbjct: 403 TKPIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCS 462
Query: 326 GNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+A RL V+ S D T+ +W K T + GH+ V V +SPDGQ V S DK++
Sbjct: 463 FSADSRLLVTASKDTTLKVWNVRTGKLA-TDLPGHEDEVYGVDWSPDGQRVGSGGRDKAV 521
Query: 385 KLW 387
+LW
Sbjct: 522 RLW 524
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 47/151 (31%), Positives = 74/151 (49%)
Query: 78 VEKVLSIVYQPQAVFRIRPVNRCSATIA---GHTEAVLSVAFSPDGRQLASGSGDTTVRL 134
VE+++S ++ P+N + IA GH + V V FSPDG +AS D +L
Sbjct: 381 VERLVS-ASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKL 439
Query: 135 WDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKK 194
W+ + GH V ++SAD + LV+ SK L+ W+ +TGK + + L GH+
Sbjct: 440 WNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGKLATD-LPGHED 498
Query: 195 WITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+ G+ W P +R S +D R+W
Sbjct: 499 EVYGVDWSP-----DGQRVGSGGRDKAVRLW 524
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 456 (165.6 bits), Expect = 7.9e-42, P = 7.9e-42
Identities = 108/300 (36%), Positives = 168/300 (56%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH+++V SVAFSPDG+QLAS S DTT++LW+ T GH W+ +A+S DG
Sbjct: 955 TLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDG 1014
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
KHLVSGS ++ WD T + + L H + + +++ P ++ S+S D
Sbjct: 1015 KHLVSGSDDNTIKLWDLATSELQQS-LEDHSRSVHAVAFSPDD-----KQLASSSLDSTI 1068
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WD + + L GH+ V V + DG ++ + S D TIK+W G+L + L G
Sbjct: 1069 KLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRS 1128
Query: 282 HWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYN-KIKGN--APER--LVSG 335
WV+S+A S + L +G +D T K + S LE ++ +I+ +P+ L SG
Sbjct: 1129 DWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASG 1188
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T LW+PA + + GH + V V FSPDG+ +AS+S+ ++IKLW+ TG+ +
Sbjct: 1189 SYDQTAKLWDPATGELLQI-FEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELL 1247
Score = 444 (161.4 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 104/315 (33%), Positives = 170/315 (53%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T GH ++ SVAF+PDG++LAS S D+T+++WDL T H V +A+S DG
Sbjct: 829 TFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDG 888
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S S ++ W+P TG+ + L G W+ +++ P ++ S S+
Sbjct: 889 KLLASSSLDSTIKVWNPATGELQQS-LEGRSGWVKSVAFSP-----DGKKLASGSEKNTV 942
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
++W+ + + + L GH+ +V V + DG + + S D TIK+W +T G+L + KGH
Sbjct: 943 KLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHD 1002
Query: 282 HWVNSLALSTEYA-LRTGAFDHTGKQYS-SPEEMKKAALERYNKIKGNA--PE--RLVSG 335
W+ ++A S + L +G+ D+T K + + E++++ + + A P+ +L S
Sbjct: 1003 LWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASS 1062
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T+ LW+ A + +T + GH Q V V FSPDG+ +AS S+D +IKLWN TG+
Sbjct: 1063 SLDSTIKLWDSATGELQRT-LEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQ 1121
Query: 396 AVFRGHVGPVYQIRF 410
G V + F
Sbjct: 1122 QTLTGRSDWVDSVAF 1136
Score = 425 (154.7 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 104/315 (33%), Positives = 167/315 (53%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ G + V SVAFSPDG++LASGS TV+LW+ T + GH V +A+S DG
Sbjct: 913 SLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDG 972
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S S ++ W+ TG+ GH WI +++ P + VS S D
Sbjct: 973 KQLASSSSDTTIKLWNSTTGELQ-QTFKGHDLWIRAVAFSP-----DGKHLVSGSDDNTI 1026
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WD++ + L H+ +V V + D + + S D TIK+W++ G+L R L+GH
Sbjct: 1027 KLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHS 1086
Query: 282 HWVNSLALSTE-YALRTGAFDHTGKQYSS-PEEMKKAALERYNKIKGNA--PE--RLVSG 335
V S+ S + L + ++D T K ++ E+++ R + + A P+ +L SG
Sbjct: 1087 QGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASG 1146
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
D T+ LW+ A + +T + GH + V FSPDG+ +AS S+D++ KLW+ TG+ +
Sbjct: 1147 YYDSTIKLWDSATGELLQT-LEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELL 1205
Query: 396 AVFRGHVGPVYQIRF 410
+F GH V + F
Sbjct: 1206 QIFEGHSKWVESVAF 1220
Score = 423 (154.0 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 100/315 (31%), Positives = 168/315 (53%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ H+++V SVAFSPDG+ LAS S D+T+++W+ T G WV +A+S DG
Sbjct: 871 TLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDG 930
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L SGS+ ++ W+P TG+ L GH + + +++ P ++ S+S D
Sbjct: 931 KKLASGSEKNTVKLWNPATGELL-QTLEGHSQSVRSVAFSP-----DGKQLASSSSDTTI 984
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
++W+ + + GH L + V + DG + +GS D TIK+W+ +L + L+ H
Sbjct: 985 KLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHS 1044
Query: 282 HWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNK-IKGN--APER--LVSG 335
V+++A S + L + + D T K + S + LE +++ ++ +P+ L S
Sbjct: 1045 RSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASN 1104
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T+ LW P + +T +TG V+ V FSPDG+ +AS +D +IKLW+ TG+ +
Sbjct: 1105 SYDGTIKLWNPLTGELQQT-LTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELL 1163
Query: 396 AVFRGHVGPVYQIRF 410
GH + + F
Sbjct: 1164 QTLEGHSDRIQSVVF 1178
Score = 399 (145.5 bits), Expect = 9.5e-36, P = 9.5e-36
Identities = 105/315 (33%), Positives = 156/315 (49%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ H V SV FSPDG+QL SGS D TV++WD T + GH V +A+S DG
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDG 804
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L SGS + WD TG+ GH I +++ P + SAS D
Sbjct: 805 KLLASGSYDNTIDLWDSATGELL-QTFEGHPHSIWSVAFAP-----DGKELASASDDSTI 858
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
+IWD++ + L H+ +V V + DG ++ + S D TIKVW G+L + L+G
Sbjct: 859 KIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRS 918
Query: 282 HWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNK-IKGNA--PE--RLVSG 335
WV S+A S + L +G+ +T K ++ LE +++ ++ A P+ +L S
Sbjct: 919 GWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASS 978
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T+ LW + +T GH + V FSPDG+ + S S D +IKLW+ T +
Sbjct: 979 SSDTTIKLWNSTTGELQQT-FKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQ 1037
Query: 396 AVFRGHVGPVYQIRF 410
H V+ + F
Sbjct: 1038 QSLEDHSRSVHAVAF 1052
Score = 361 (132.1 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 95/307 (30%), Positives = 151/307 (49%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T GH + +VAFSPDG+ L SGS D T++LWDL T H V +A+S D
Sbjct: 997 TFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDD 1056
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S S ++ WD TG+ L GH + + +++ P + S S DG
Sbjct: 1057 KQLASSSLDSTIKLWDSATGELQ-RTLEGHSQGVRSVTFSP-----DGKLLASNSYDGTI 1110
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
++W+ + L+G + V V + DG + +G D TIK+W++ G+L++ L+GH
Sbjct: 1111 KLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHS 1170
Query: 282 HWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNK-IKGNA--PER--LVSG 335
+ S+ S + L +G++D T K + E ++K ++ A P+ L S
Sbjct: 1171 DRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASS 1230
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS-FDKSIKLWNGTTGKF 394
S T+ LW+P + +T + + V FSPDG +AS FD K+W+ TG+
Sbjct: 1231 SYGETIKLWDPVTGELLQT-LNDPDESAGSVAFSPDGNRLASVDIFDT--KIWDPATGEL 1287
Query: 395 VAVFRGH 401
+ +GH
Sbjct: 1288 LQALKGH 1294
Score = 264 (98.0 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 60/183 (32%), Positives = 96/183 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ G ++ V SVAFSPDG+QLASG D+T++LWD T + GH + + + +S DG
Sbjct: 1123 TLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDG 1182
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L SGS + WDP TG+ GH KW+ +++ +P + +++S G+
Sbjct: 1183 KLLASGSYDQTAKLWDPATGELL-QIFEGHSKWVESVAF------SPDGKLLASSSYGET 1235
Query: 223 -RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WD + + L+ + V + DG K+W+ G+L++ LKGH
Sbjct: 1236 IKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDTKIWDPATGELLQALKGHS 1295
Query: 282 HWV 284
WV
Sbjct: 1296 KWV 1298
Score = 171 (65.3 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 48/141 (34%), Positives = 75/141 (53%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
++LVSGS D T+ +W+PA + +T + GH V + FSPDG+ +AS S+D +I LW+
Sbjct: 763 KQLVSGSYDDTVKIWDPATGELLQT-LDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDS 821
Query: 390 TTGKFVAVFRGHVGPVYQIRF-----EL--------IYCFRYPSN-FYCVVDM-SCCMSL 434
TG+ + F GH ++ + F EL I + + +D S +
Sbjct: 822 ATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRS 881
Query: 435 YSWSADSRLLLSGSKDSTLKV 455
++S D +LL S S DST+KV
Sbjct: 882 VAFSPDGKLLASSSLDSTIKV 902
Score = 167 (63.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 48/141 (34%), Positives = 72/141 (51%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
++L SGS+ T+ LW PA + +T + GH Q V V FSPDG+ +AS+S D +IKLWN
Sbjct: 931 KKLASGSEKNTVKLWNPATGELLQT-LEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNS 989
Query: 390 TTGKFVAVFRGHVGPVYQIRFE-----LI----------YCFRYPSNFYCVVDMSCCMSL 434
TTG+ F+GH + + F L+ + + D S +
Sbjct: 990 TTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHA 1049
Query: 435 YSWSADSRLLLSGSKDSTLKV 455
++S D + L S S DST+K+
Sbjct: 1050 VAFSPDDKQLASSSLDSTIKL 1070
Score = 140 (54.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 46/141 (32%), Positives = 68/141 (48%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
++L S S D T+ LW+ A + +T + GH Q V V FSPDG+ +AS S+D +IKLWN
Sbjct: 1057 KQLASSSLDSTIKLWDSATGELQRT-LEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNP 1115
Query: 390 TTGKFVAVFRGHVGPVYQIRF----ELIYCFRYPSNFY----CVVDMSCCMSLYS----- 436
TG+ G V + F + + Y S ++ + +S
Sbjct: 1116 LTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQS 1175
Query: 437 --WSADSRLLLSGSKDSTLKV 455
+S D +LL SGS D T K+
Sbjct: 1176 VVFSPDGKLLASGSYDQTAKL 1196
Score = 138 (53.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 42/139 (30%), Positives = 65/139 (46%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S S D T+ LW P + +T +TG V+ V FSPDG+ +AS +D +IKLW+ T
Sbjct: 1101 LASNSYDGTIKLWNPLTGELQQT-LTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSAT 1159
Query: 392 GKFVAVFRGHVGPVYQIRF----ELIYCFRY--------PSN---FYCVVDMSCCMSLYS 436
G+ + GH + + F +L+ Y P+ S + +
Sbjct: 1160 GELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVA 1219
Query: 437 WSADSRLLLSGSKDSTLKV 455
+S D +LL S S T+K+
Sbjct: 1220 FSPDGKLLASSSYGETIKL 1238
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 396 (144.5 bits), Expect = 3.2e-35, P = 3.2e-35
Identities = 104/305 (34%), Positives = 148/305 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH E V SV FS D R LAS S D TV++WD T T GH + V + +S D
Sbjct: 300 TLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDS 359
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ + SGS ++ W+ TG + H+ + +S+ H RR SAS G+
Sbjct: 360 RLIASGSNDRTVRIWETTTGLLR-HTFEDHEDSVMAVSF--AH---DSRRLASASDGGNV 413
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
+IWD L GH V V + D ++ + S D T+K+W G L R L+GH
Sbjct: 414 KIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHN 473
Query: 282 HWVNSLALSTEYALRTGAFDH-TGKQYSSPEEMKKAALERY-NKIKG---NAPERLV-SG 335
WV S+ S + L A D T K + + + LE + N ++ + RL+ S
Sbjct: 474 DWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASA 533
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
SDD T+ +W+ A T + GH VN V FSPD + +ASAS D ++K+W TG
Sbjct: 534 SDDMTVKIWDTATGSLENT-LEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQ 592
Query: 396 AVFRG 400
F G
Sbjct: 593 HTFDG 597
Score = 366 (133.9 bits), Expect = 5.0e-32, P = 5.0e-32
Identities = 100/316 (31%), Positives = 143/316 (45%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A GH AV SV+FS D R LAS SGD TV++WD T GH WV + +S D
Sbjct: 257 AQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHD 316
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ L S S G ++ WD TG L GH + + + H R S S D
Sbjct: 317 SRLLASASDDGTVKIWDTATGTLQ-RMLKGHNDSVRSVVFS--H---DSRLIASGSNDRT 370
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
RIW+ + H +V V + D + + S +K+W+T G L L+GH
Sbjct: 371 VRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGH 430
Query: 281 GHWVNSLALSTEYALRTGAFD-HTGKQYSSPEEMKKAALERYN----KIKGNAPERLV-S 334
VNS++ S + L A D T K + + + LE +N + + RL+ S
Sbjct: 431 DDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIAS 490
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
SDD T+ +W+ A + + H V V FS D + +ASAS D ++K+W+ TG
Sbjct: 491 ASDDMTVKIWDTATVPL-QNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSL 549
Query: 395 VAVFRGHVGPVYQIRF 410
GH V + F
Sbjct: 550 ENTLEGHDDRVNSVSF 565
Score = 346 (126.9 bits), Expect = 6.7e-30, P = 6.7e-30
Identities = 91/292 (31%), Positives = 139/292 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH ++V SV FS D R +ASGS D TVR+W+ T H++ V+ ++++ D +
Sbjct: 343 LKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSR 402
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S G ++ WD +TG N L GH + +S+ P R SAS D +
Sbjct: 403 RLASASDGGNVKIWDTRTGSLQ-NVLEGHDDCVNSVSFSP-----DSRLLASASDDRTVK 456
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IW + L GH V V + D +I + S D T+K+W+T L L+ H +
Sbjct: 457 IWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDN 516
Query: 283 WVNSLALSTEYALRTGAFDH-TGKQYSSPEEMKKAALE----RYNKIKGNAPERLV-SGS 336
WV S+ S + L A D T K + + + LE R N + + RL+ S S
Sbjct: 517 WVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASAS 576
Query: 337 DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
DD T+ +W A T G ++ + FS +ASA D ++K+W+
Sbjct: 577 DDGTVKIWYAATGTVQHT-FDGSGRVAISLAFSHTSNLLASAMDDGTVKIWD 627
Score = 145 (56.1 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 39/126 (30%), Positives = 59/126 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ H V SV FS D R LAS S D TV++WD T + GH + V +++S D +
Sbjct: 511 LESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSR 570
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S G ++ W TG + G + +++ H + SA DG +
Sbjct: 571 LLASASDDGTVKIWYAATGTVQ-HTFDGSGRVAISLAFS--HTS---NLLASAMDDGTVK 624
Query: 224 IWDVSL 229
IWD+ +
Sbjct: 625 IWDMEI 630
Score = 141 (54.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 43/139 (30%), Positives = 63/139 (45%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S SDD T+ +W+ A + + GH V V FS D + +AS S D+++++W TT
Sbjct: 320 LASASDDGTVKIWDTATGTLQRM-LKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTT 378
Query: 392 GKFVAVFRGHVGPVYQIRFE---------------LIYCFRYPSNFYCVVDMSCCMSLYS 436
G F H V + F I+ R S + C++ S
Sbjct: 379 GLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVS 438
Query: 437 WSADSRLLLSGSKDSTLKV 455
+S DSRLL S S D T+K+
Sbjct: 439 FSPDSRLLASASDDRTVKI 457
Score = 127 (49.8 bits), Expect = 0.00037, P = 0.00037
Identities = 29/76 (38%), Positives = 39/76 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + V SV+FSPD R LAS S D TV++W T T G + +A+S
Sbjct: 552 TLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTS 611
Query: 163 KHLVSGSKAGELQCWD 178
L S G ++ WD
Sbjct: 612 NLLASAMDDGTVKIWD 627
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 98/297 (32%), Positives = 152/297 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH++ + +V FSPDGR LASGS DTT++LWD + GH + V +A+S +G
Sbjct: 36 TLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNG 95
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ L SGS ++ W+ + + + GH + +++ P +
Sbjct: 96 QLLASGSSDTTIKLWNSASDSLK-HTMEGHSDRVESVAFSP-----------------NG 137
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
++W+ ++ + GH+ V V + DG ++ +GS + TIK+W++ L L GH
Sbjct: 138 QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHS 197
Query: 282 HWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERY-NKIKGNA--P--ERLVSG 335
+WV L S + L +G+ D T K + P K LE + NKI+ A P + L SG
Sbjct: 198 NWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASG 257
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
S D T+ LW+ A T + GH +V V FSPD Q + S S D +IKLW+ TG
Sbjct: 258 SSDATIKLWDTATGSFRHT-LKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATG 313
Score = 318 (117.0 bits), Expect = 2.1e-28, P = 2.1e-28
Identities = 87/248 (35%), Positives = 123/248 (49%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN 138
++V S+ + P + TI GH++ VLSVAFSPDG+ LASGS + T++LWD
Sbjct: 126 DRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSA 185
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T GH NWVL + +S DG+ L SGS ++ WDP +G + L GH I
Sbjct: 186 TCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLK-HTLEGHSNKIES 244
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTG 257
+++ P N + S S D ++WD + L GH+ V V + D ++ +G
Sbjct: 245 LAFSP---NG--QLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESG 299
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRT--GAFD----HTGKQYSSP 310
S D TIK+W+ G L ++ G V S+ S E L T G F HTG Y S
Sbjct: 300 SGDNTIKLWDPATGILKHSMRTPGI-VRSIEFSIELPQLITNLGTFSIQAWHTG--YPSR 356
Query: 311 EEMKKAAL 318
KK A+
Sbjct: 357 SSGKKTAV 364
Score = 282 (104.3 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 79/269 (29%), Positives = 127/269 (47%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GH +W+ + +S DG+ L SGS ++ WDP +G L GH + +++ P N
Sbjct: 39 GHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLK-QTLEGHSSSVQSVAFSP---N 94
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWE 267
+ S S D ++W+ + + GH+ V V + +G ++W
Sbjct: 95 G--QLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG-----------QLWN 141
Query: 268 TTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNK--- 323
G L ++GH WV S+A S + L +G+ + T K + S K L ++
Sbjct: 142 PAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVL 201
Query: 324 -IKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
+ + RL+ SGS+D T+ LW+P S K + GH + + FSP+GQ +AS S D
Sbjct: 202 PLVFSPDGRLLASGSNDATIKLWDPP-SGSLKHTLEGHSNKIESLAFSPNGQLLASGSSD 260
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+IKLW+ TG F +GH V + F
Sbjct: 261 ATIKLWDTATGSFRHTLKGHSDMVLSVVF 289
Score = 231 (86.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 81/291 (27%), Positives = 129/291 (44%)
Query: 184 PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV 243
P L GH WI +++ P R S S D ++WD + L GH+ +V
Sbjct: 32 PELQTLEGHSDWIETVTFSP-----DGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSV 86
Query: 244 TCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL---RTGA 299
V + +G ++ +GS D TIK+W + L ++GH V S+A S L G+
Sbjct: 87 QSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGS 146
Query: 300 FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGH 359
HT + +S + + A ++ L SGS + T+ LW+ A T + GH
Sbjct: 147 LKHTIEGHS--DWVLSVAFSPDGQL-------LASGSAEKTIKLWDSATCGLKHT-LGGH 196
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIYC 415
V + FSPDG+ +AS S D +IKLW+ +G GH + + F +L+
Sbjct: 197 SNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLAS 256
Query: 416 FRYPSNF-----------YCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
+ + + S + +S DS+LL SGS D+T+K+
Sbjct: 257 GSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKL 307
Score = 140 (54.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 61/210 (29%), Positives = 87/210 (41%)
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNK-I 324
E G ++ L+GH W+ ++ S + L +G+ D T K + K LE ++ +
Sbjct: 27 EDNWGPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSV 86
Query: 325 KGNA--P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
+ A P + L SGS D T+ LW A S K M GH V V FSP+GQ
Sbjct: 87 QSVAFSPNGQLLASGSSDTTIKLWNSA-SDSLKHTMEGHSDRVESVAFSPNGQ------- 138
Query: 381 DKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE---LIYCFRYPSNFYCVVDMSCC-----M 432
LWN G GH V + F + + D + C +
Sbjct: 139 -----LWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTL 193
Query: 433 SLYS-W------SADSRLLLSGSKDSTLKV 455
+S W S D RLL SGS D+T+K+
Sbjct: 194 GGHSNWVLPLVFSPDGRLLASGSNDATIKL 223
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 95/302 (31%), Positives = 161/302 (53%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT--GHKNWVLCIAWSA 160
T+ GH +++ SV FSPDG+ LAS S D T+++W F+ T GHK + IAWS
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIW--GAYDGKFERTLEGHKEGISDIAWSQ 98
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
D K + S S ++ WD ++GK L GHK+++ G+S+ P N VS S D
Sbjct: 99 DSKLICSASDDKTIKIWDVESGKMV-KTLKGHKEYVFGVSFNP-QSNL----IVSGSFDE 152
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
+ RIWDV+ +C +S H+ VT V + DG ++ +GS D T+++W+TT G+L+ +
Sbjct: 153 NVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTIST 212
Query: 280 H-GHWVNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAAL----ERY---NKIKGN 327
G V+ + S ++ L G D+T + Y++ ++ K E+Y +
Sbjct: 213 EDGKEVSFVKFSPNGKFVL-AGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVT 271
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF--DKSIK 385
+ +V+GS+D ++++ + +T + GH+ +V V P +AS + D+S+K
Sbjct: 272 CGKWIVTGSEDNLIYIYNLQTREIVQT-LAGHEDVVLTVACHPTENIIASGALEKDRSVK 330
Query: 386 LW 387
+W
Sbjct: 331 IW 332
Score = 230 (86.0 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 65/228 (28%), Positives = 109/228 (47%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L GH K I+ + + P + SAS D +IW K L GH ++ + W
Sbjct: 42 LKGHLKSISSVKFSP-----DGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAW 96
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQ 306
D +I + S D TIK+W+ GK+++ LKGH +V ++ + + L +G+FD +
Sbjct: 97 SQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRI 156
Query: 307 YS-SPEEMKKAALERYNKIKG---NAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + E K + + G N LV SGS D T+ +W+ + T T +
Sbjct: 157 WDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGK 216
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWN-GTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G++V + + D +++LW+ K + + GH Y I
Sbjct: 217 EVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCI 264
Score = 218 (81.8 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 75/277 (27%), Positives = 127/277 (45%)
Query: 140 QTPMF--KCT--GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKW 195
QTP + K T GH + + +S DGK L S S ++ W GK L GHK+
Sbjct: 32 QTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFE-RTLEGHKEG 90
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VI 254
I+ I+W + + SAS D +IWDV K V L GH V V + +I
Sbjct: 91 ISDIAW-----SQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLI 145
Query: 255 YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSP--E 311
+GS D +++W+ G+ + + H V + + + L +G++D T + + + +
Sbjct: 146 VSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQ 205
Query: 312 EMKKAALE---RYNKIKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY 367
+ + E + +K + + V +G+ D T+ LW +K+ TGH+ ++
Sbjct: 206 LLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIF 265
Query: 368 --FSPD-GQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
FS G+W+ + S D I ++N T + V GH
Sbjct: 266 STFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGH 302
Score = 165 (63.1 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 52/182 (28%), Positives = 89/182 (48%)
Query: 93 RIRPVN--RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT-QTPMFKCTGH 149
RI VN C+ I+ H++ V V F+ DG + SGS D TVR+WD T Q T
Sbjct: 155 RIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTED 214
Query: 150 KNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP 209
V + +S +GK +++G+ L+ W K +GHK I +
Sbjct: 215 GKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFST---FSVT 271
Query: 210 CRRF-VSASKDGDARIWDVSLRKCVICLSGHT-LAVTCVKWGGDGVIYTGS--QDCTIKV 265
C ++ V+ S+D I+++ R+ V L+GH + +T + +I +G+ +D ++K+
Sbjct: 272 CGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKI 331
Query: 266 WE 267
W+
Sbjct: 332 WK 333
Score = 136 (52.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 44/157 (28%), Positives = 79/157 (50%)
Query: 315 KAALERYNKIKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ 373
K L+ + +K + + L S S D T+ +W K +T + GH++ ++ + +S D +
Sbjct: 43 KGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERT-LEGHKEGISDIAWSQDSK 101
Query: 374 WVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE----LIYCFRYPSN--FYCVVD 427
+ SAS DK+IK+W+ +GK V +GH V+ + F LI + N + V
Sbjct: 102 LICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNT 161
Query: 428 MSCC--MSLYS-------WSADSRLLLSGSKDSTLKV 455
C +S +S ++ D L++SGS D T+++
Sbjct: 162 GECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRI 198
Score = 134 (52.2 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 49/193 (25%), Positives = 88/193 (45%)
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLV-SGSDDF 339
G W+ S + + GA+D GK + E K E + I + +L+ S SDD
Sbjct: 58 GKWLASASADKTIKI-WGAYD--GKFERTLEGHK----EGISDIAWSQDSKLICSASDDK 110
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFR 399
T+ +W+ K KT + GH++ V V F+P + S SFD+++++W+ TG+ +
Sbjct: 111 TIKIWDVESGKMVKT-LKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMIS 169
Query: 400 GHVGPVYQIRFE----LIYCFRYPSNFYCVVDMSCC-------------MSLYSWSADSR 442
H PV + F L+ Y + D + +S +S + +
Sbjct: 170 AHSDPVTGVHFNRDGTLVVSGSYDGTVR-IWDTTTGQLLNTISTEDGKEVSFVKFSPNGK 228
Query: 443 LLLSGSKDSTLKV 455
+L+G+ D+TL++
Sbjct: 229 FVLAGTLDNTLRL 241
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 101/312 (32%), Positives = 153/312 (49%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV +V FSP+G LAS S D +++W +GHK +
Sbjct: 58 VKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 117
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D + LVSGS L+ W+ TGK S L GH ++ ++ P N
Sbjct: 118 SDVAWSSDSRLLVSGSDDKTLKVWELSTGK-SLKTLKGHSNYVFCCNFNP-QSNL----I 171
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 172 VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 231
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 232 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 290
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W SK+ ++ GH V P +ASA+
Sbjct: 291 ANFSVTGGKWIVSGSEDNMVYIWN-LQSKEVVQKLQGHTDTVLCTACHPTENIIASAALE 349
Query: 381 -DKSIKLWNGTT 391
DK+IKLW T
Sbjct: 350 NDKTIKLWKSDT 361
Score = 247 (92.0 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 69/231 (29%), Positives = 115/231 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 68 LAGHTKAVSAVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 122
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ +GS D T+KVWE + GK ++ LKGH ++V + + L +G+FD
Sbjct: 123 SSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 182
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 183 WDVRTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 238
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I
Sbjct: 239 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 289
Score = 235 (87.8 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 71/277 (25%), Positives = 132/277 (47%)
Query: 141 TPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
T F GH V + +S +G+ L S S ++ W GK +SGHK I+ ++
Sbjct: 63 TLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVA 121
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQ 259
W ++ R VS S D ++W++S K + L GH+ V C + +I +GS
Sbjct: 122 W-----SSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSF 176
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE-EMKKAA 317
D ++++W+ GK ++ L H V+++ + + +L + ++D + + + + K
Sbjct: 177 DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 236
Query: 318 LERYN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS 369
++ N K N + +++ + D T+ LW+ + K KT TGH+ ++ FS
Sbjct: 237 IDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCLKT-YTGHKNEKYCIFANFS 294
Query: 370 -PDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
G+W+ S S D + +WN + + V +GH V
Sbjct: 295 VTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTV 331
Score = 151 (58.2 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
LVSGSDD T+ +WE + K KT + GH V F+P + S SFD+S+++W+ T
Sbjct: 129 LVSGSDDKTLKVWELSTGKSLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 187
Query: 392 GKFVAVFRGHVGPVYQIRF 410
GK + H PV + F
Sbjct: 188 GKCLKTLPAHSDPVSAVHF 206
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 95/303 (31%), Positives = 149/303 (49%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT-----QTPMFKCTGHKNWVLC 155
S T+ H AV SV FS DGR LAS S D T+R + +NT P+ + TGH+N +
Sbjct: 17 SQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISD 76
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+A+S+D + +VS S L+ WD +TG L GH + +++ P VS
Sbjct: 77 VAFSSDARFIVSASDDKTLKLWDVETGSLI-KTLIGHTNYAFCVNFNP-----QSNMIVS 130
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLI 274
S D RIWDV+ KC+ L H+ VT V + DG +I + S D ++W++ G +
Sbjct: 131 GSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCV 190
Query: 275 REL-KGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS-SPEEMKKAALERYNK---IKG-- 326
+ L V+ + S + G D+T + ++ S + K N I
Sbjct: 191 KTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAF 250
Query: 327 --NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+R+VSGS+D + +WE SK+ ++ GH + V +V P +AS S DK++
Sbjct: 251 SVTNGKRIVSGSEDNCVHMWE-LNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTV 309
Query: 385 KLW 387
++W
Sbjct: 310 RIW 312
Score = 243 (90.6 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 75/260 (28%), Positives = 116/260 (44%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
P+ GH + VAFS D R + S S D T++LWD+ T + + GH N+ C
Sbjct: 59 PIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFC 118
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ ++ +VSGS ++ WD TGK L H +T + + N VS
Sbjct: 119 VNFNPQSNMIVSGSFDETVRIWDVTTGKCL-KVLPAHSDPVTAVDF-----NRDGSLIVS 172
Query: 216 ASKDGDARIWDVSLRKCVICL-SGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKL 273
+S DG RIWD CV L V+ V++ +G I G+ D T+++W + K
Sbjct: 173 SSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKF 232
Query: 274 IRELKGH--GHWVNSLALSTEYALR--TGAFDHTGKQYSSPEEMKKAALERYNKIKGNA- 328
++ GH + S A S R +G+ D+ + + LE + + N
Sbjct: 233 LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVA 292
Query: 329 --P-ERLV-SGSDDFTMFLW 344
P E L+ SGS D T+ +W
Sbjct: 293 CHPTENLIASGSLDKTVRIW 312
Score = 216 (81.1 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 74/278 (26%), Positives = 126/278 (45%)
Query: 147 TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPL---SGHKKWITGISWE 202
T H V + +S+DG+ L S S ++ + T P P+ +GH+ GIS
Sbjct: 21 TSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHEN---GIS-- 75
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
V ++ R VSAS D ++WDV + L GHT CV + +I +GS D
Sbjct: 76 DVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDE 135
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE-EMKKAALE 319
T+++W+ T GK ++ L H V ++ + + +L + ++D + + S K ++
Sbjct: 136 TVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLID 195
Query: 320 RYN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGH---QQLVNHVYFSP 370
N + N LV G+ D T+ LW + +K KT TGH Q ++ +
Sbjct: 196 DENPPVSFVRFSPNGKFILV-GTLDNTLRLWNISSAKFLKT-YTGHVNAQYCISSAFSVT 253
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
+G+ + S S D + +W + K + GH V +
Sbjct: 254 NGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNV 291
Score = 145 (56.1 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 44/140 (31%), Positives = 70/140 (50%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VS SDD T+ LW+ KT + GH V F+P + S SFD+++++W+ TT
Sbjct: 86 IVSASDDKTLKLWDVETGSLIKT-LIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTT 144
Query: 392 GKFVAVFRGHVGPVYQIRFE----LI----Y---CFRYPSNF-YCVV----DMSCCMSLY 435
GK + V H PV + F LI Y C + S +CV D + +S
Sbjct: 145 GKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFV 204
Query: 436 SWSADSRLLLSGSKDSTLKV 455
+S + + +L G+ D+TL++
Sbjct: 205 RFSPNGKFILVGTLDNTLRL 224
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+P TGH+ ++ V FS D +++ SAS DK++KLW+ TG + GH + + F
Sbjct: 62 EPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNF 121
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 31 VKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 144
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIF 263
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEVVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 323 NDKTIKLW 330
Score = 243 (90.6 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 75/277 (27%), Positives = 132/277 (47%)
Query: 141 TPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
T F GH V + +S +G+ L S S ++ W GK +SGHK I+ ++
Sbjct: 36 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVA 94
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQ 259
W ++ VSAS D +IWDVS KC+ L GH+ V C + +I +GS
Sbjct: 95 W-----SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE-EMKKAA 317
D ++++W+ GK ++ L H V+++ + + +L + ++D + + + + K
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 318 LERYN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS 369
++ N K N + +++ + D T+ LW+ + K KT T H+ ++ FS
Sbjct: 210 IDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCLKT-YTCHKNEKYCIFANFS 267
Query: 370 -PDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
G+W+ S S D + +WN T + V +GH V
Sbjct: 268 VTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVV 304
Score = 231 (86.4 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 65/231 (28%), Positives = 113/231 (48%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + H Y I
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCI 262
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
LVS SDD T+ +W+ + K KT + GH V F+P + S SFD+S+++W+ T
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 392 GKFVAVFRGHVGPVYQIRF 410
GK + H PV + F
Sbjct: 161 GKCLKTLPAHSDPVSAVHF 179
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 34/118 (28%), Positives = 58/118 (49%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFEL 412
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH + + +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 413 ---IYCFRYPSNFYCVVDMS---CCMSL-----Y----SWSADSRLLLSGSKDSTLKV 455
+ + D+S C +L Y +++ S L++SGS D ++++
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Score = 114 (45.2 bits), Expect = 0.00099, P = 0.00099
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E L S S D + +W K KT ++GH+ ++ V +S D + SAS DK++K+W+
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Query: 390 TTGKFVAVFRGHVGPVYQIRF 410
++GK + +GH V+ F
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNF 137
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 5 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 64
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 65 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 118
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 119 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 178
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 179 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 237
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 238 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 296
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 297 NDKTIKLW 304
Score = 252 (93.8 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 75/274 (27%), Positives = 132/274 (48%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
F GH V + +S +G+ L S S ++ W GK +SGHK I+ ++W
Sbjct: 13 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAW-- 69
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
++ VSAS D +IWDVS KC+ L GH+ V C + +I +GS D +
Sbjct: 70 ---SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 126
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE-EMKKAALER 320
+++W+ GK ++ L H V+++ + + +L + ++D + + + + K ++
Sbjct: 127 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 186
Query: 321 YN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS-PD 371
N K N + +++ + D T+ LW+ + K KT TGH+ ++ FS
Sbjct: 187 DNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCLKT-YTGHKNEKYCIFANFSVTG 244
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
G+W+ S S D + +WN T + V +GH V
Sbjct: 245 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 278
Score = 240 (89.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 66/231 (28%), Positives = 114/231 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 15 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 69
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 70 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 129
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 130 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 185
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I
Sbjct: 186 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 236
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
LVS SDD T+ +W+ + K KT + GH V F+P + S SFD+S+++W+ T
Sbjct: 76 LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 134
Query: 392 GKFVAVFRGHVGPVYQIRF 410
GK + H PV + F
Sbjct: 135 GKCLKTLPAHSDPVSAVHF 153
Score = 127 (49.8 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH
Sbjct: 12 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 60
Score = 114 (45.2 bits), Expect = 0.00085, P = 0.00085
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E L S S D + +W K KT ++GH+ ++ V +S D + SAS DK++K+W+
Sbjct: 32 EWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 90
Query: 390 TTGKFVAVFRGHVGPVYQIRF 410
++GK + +GH V+ F
Sbjct: 91 SSGKCLKTLKGHSNYVFCCNF 111
Score = 66 (28.3 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
+WS+DS LL+S S D TLK+
Sbjct: 68 AWSSDSNLLVSASDDKTLKI 87
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 144
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 323 NDKTIKLW 330
Score = 252 (93.8 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 75/274 (27%), Positives = 132/274 (48%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
F GH V + +S +G+ L S S ++ W GK +SGHK I+ ++W
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAW-- 95
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
++ VSAS D +IWDVS KC+ L GH+ V C + +I +GS D +
Sbjct: 96 ---SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE-EMKKAALER 320
+++W+ GK ++ L H V+++ + + +L + ++D + + + + K ++
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 321 YN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS-PD 371
N K N + +++ + D T+ LW+ + K KT TGH+ ++ FS
Sbjct: 213 DNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCLKT-YTGHKNEKYCIFANFSVTG 270
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
G+W+ S S D + +WN T + V +GH V
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Score = 240 (89.5 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 66/231 (28%), Positives = 114/231 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
LVS SDD T+ +W+ + K KT + GH V F+P + S SFD+S+++W+ T
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 392 GKFVAVFRGHVGPVYQIRF 410
GK + H PV + F
Sbjct: 161 GKCLKTLPAHSDPVSAVHF 179
Score = 127 (49.8 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 86
Score = 114 (45.2 bits), Expect = 0.00099, P = 0.00099
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E L S S D + +W K KT ++GH+ ++ V +S D + SAS DK++K+W+
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Query: 390 TTGKFVAVFRGHVGPVYQIRF 410
++GK + +GH V+ F
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNF 137
Score = 66 (28.3 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
+WS+DS LL+S S D TLK+
Sbjct: 94 AWSSDSNLLVSASDDKTLKI 113
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 144
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 323 NDKTIKLW 330
Score = 252 (93.8 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 75/274 (27%), Positives = 132/274 (48%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
F GH V + +S +G+ L S S ++ W GK +SGHK I+ ++W
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAW-- 95
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
++ VSAS D +IWDVS KC+ L GH+ V C + +I +GS D +
Sbjct: 96 ---SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE-EMKKAALER 320
+++W+ GK ++ L H V+++ + + +L + ++D + + + + K ++
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 321 YN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS-PD 371
N K N + +++ + D T+ LW+ + K KT TGH+ ++ FS
Sbjct: 213 DNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCLKT-YTGHKNEKYCIFANFSVTG 270
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
G+W+ S S D + +WN T + V +GH V
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Score = 240 (89.5 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 66/231 (28%), Positives = 114/231 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
LVS SDD T+ +W+ + K KT + GH V F+P + S SFD+S+++W+ T
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 392 GKFVAVFRGHVGPVYQIRF 410
GK + H PV + F
Sbjct: 161 GKCLKTLPAHSDPVSAVHF 179
Score = 127 (49.8 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 86
Score = 114 (45.2 bits), Expect = 0.00099, P = 0.00099
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E L S S D + +W K KT ++GH+ ++ V +S D + SAS DK++K+W+
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Query: 390 TTGKFVAVFRGHVGPVYQIRF 410
++GK + +GH V+ F
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNF 137
Score = 66 (28.3 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
+WS+DS LL+S S D TLK+
Sbjct: 94 AWSSDSNLLVSASDDKTLKI 113
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 144
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 323 NDKTIKLW 330
Score = 252 (93.8 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 75/274 (27%), Positives = 132/274 (48%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
F GH V + +S +G+ L S S ++ W GK +SGHK I+ ++W
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAW-- 95
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
++ VSAS D +IWDVS KC+ L GH+ V C + +I +GS D +
Sbjct: 96 ---SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE-EMKKAALER 320
+++W+ GK ++ L H V+++ + + +L + ++D + + + + K ++
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 321 YN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS-PD 371
N K N + +++ + D T+ LW+ + K KT TGH+ ++ FS
Sbjct: 213 DNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCLKT-YTGHKNEKYCIFANFSVTG 270
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
G+W+ S S D + +WN T + V +GH V
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Score = 240 (89.5 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 66/231 (28%), Positives = 114/231 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
LVS SDD T+ +W+ + K KT + GH V F+P + S SFD+S+++W+ T
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 392 GKFVAVFRGHVGPVYQIRF 410
GK + H PV + F
Sbjct: 161 GKCLKTLPAHSDPVSAVHF 179
Score = 127 (49.8 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 86
Score = 114 (45.2 bits), Expect = 0.00099, P = 0.00099
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E L S S D + +W K KT ++GH+ ++ V +S D + SAS DK++K+W+
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Query: 390 TTGKFVAVFRGHVGPVYQIRF 410
++GK + +GH V+ F
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNF 137
Score = 66 (28.3 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
+WS+DS LL+S S D TLK+
Sbjct: 94 AWSSDSNLLVSASDDKTLKI 113
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 144
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 323 NDKTIKLW 330
Score = 252 (93.8 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 75/274 (27%), Positives = 132/274 (48%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
F GH V + +S +G+ L S S ++ W GK +SGHK I+ ++W
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAW-- 95
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
++ VSAS D +IWDVS KC+ L GH+ V C + +I +GS D +
Sbjct: 96 ---SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE-EMKKAALER 320
+++W+ GK ++ L H V+++ + + +L + ++D + + + + K ++
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 321 YN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS-PD 371
N K N + +++ + D T+ LW+ + K KT TGH+ ++ FS
Sbjct: 213 DNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCLKT-YTGHKNEKYCIFANFSVTG 270
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
G+W+ S S D + +WN T + V +GH V
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Score = 240 (89.5 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 66/231 (28%), Positives = 114/231 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
LVS SDD T+ +W+ + K KT + GH V F+P + S SFD+S+++W+ T
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 392 GKFVAVFRGHVGPVYQIRF 410
GK + H PV + F
Sbjct: 161 GKCLKTLPAHSDPVSAVHF 179
Score = 127 (49.8 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 86
Score = 114 (45.2 bits), Expect = 0.00099, P = 0.00099
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E L S S D + +W K KT ++GH+ ++ V +S D + SAS DK++K+W+
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Query: 390 TTGKFVAVFRGHVGPVYQIRF 410
++GK + +GH V+ F
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNF 137
Score = 66 (28.3 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
+WS+DS LL+S S D TLK+
Sbjct: 94 AWSSDSNLLVSASDDKTLKI 113
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 144
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 323 NDKTIKLW 330
Score = 252 (93.8 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 75/274 (27%), Positives = 132/274 (48%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
F GH V + +S +G+ L S S ++ W GK +SGHK I+ ++W
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAW-- 95
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
++ VSAS D +IWDVS KC+ L GH+ V C + +I +GS D +
Sbjct: 96 ---SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE-EMKKAALER 320
+++W+ GK ++ L H V+++ + + +L + ++D + + + + K ++
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 321 YN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS-PD 371
N K N + +++ + D T+ LW+ + K KT TGH+ ++ FS
Sbjct: 213 DNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCLKT-YTGHKNEKYCIFANFSVTG 270
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
G+W+ S S D + +WN T + V +GH V
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Score = 240 (89.5 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 66/231 (28%), Positives = 114/231 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
LVS SDD T+ +W+ + K KT + GH V F+P + S SFD+S+++W+ T
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 392 GKFVAVFRGHVGPVYQIRF 410
GK + H PV + F
Sbjct: 161 GKCLKTLPAHSDPVSAVHF 179
Score = 127 (49.8 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 86
Score = 114 (45.2 bits), Expect = 0.00099, P = 0.00099
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E L S S D + +W K KT ++GH+ ++ V +S D + SAS DK++K+W+
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Query: 390 TTGKFVAVFRGHVGPVYQIRF 410
++GK + +GH V+ F
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNF 137
Score = 66 (28.3 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
+WS+DS LL+S S D TLK+
Sbjct: 94 AWSSDSNLLVSASDDKTLKI 113
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 94/303 (31%), Positives = 150/303 (49%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW---DLNTQTPMFKCTGHKNWVLCIAWS 159
T+AGH+ A+ SV FSP+G LAS + D + +W D N + ++ GH + +AWS
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLY---GHSLEISDVAWS 90
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+D LVS S L+ WD ++GK L GH ++ + P P VS S D
Sbjct: 91 SDSSRLVSASDDKTLKVWDMRSGKCL-KTLKGHSDFVFCCDFNP-----PSNLIVSGSFD 144
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELK 278
+IW+V KC+ LS H+ ++ V + +G +I +GS D ++W+ G+ +R L
Sbjct: 145 ESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLA 204
Query: 279 GHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAA---LERY---NKIKGN 327
G+ V+ + S +Y L T D+T K YS +K E+Y
Sbjct: 205 DEGNPPVSFVKFSPNGKYIL-TATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVT 263
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF--DKSIK 385
+ +VSGS+D +++W +K+ R+ GH +V P +ASA+ DK+IK
Sbjct: 264 GRKWVVSGSEDNMVYIWN-LQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIK 322
Query: 386 LWN 388
+W+
Sbjct: 323 VWS 325
Score = 235 (87.8 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 56/183 (30%), Positives = 96/183 (52%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH+ + VA+S D +L S S D T+++WD+ + + GH ++V C ++
Sbjct: 73 CKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFN 132
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+VSGS ++ W+ +TGK LS H I+ +++ N VS S D
Sbjct: 133 PPSNLIVSGSFDESVKIWEVKTGKCL-KTLSAHSDPISAVNF-----NCNGSLIVSGSYD 186
Query: 220 GDARIWDVSLRKCVICLSGH-TLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL 277
G RIWD + +C+ L+ V+ VK+ +G I T + D T+K+W+ ++G+ ++
Sbjct: 187 GLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTY 246
Query: 278 KGH 280
GH
Sbjct: 247 TGH 249
Score = 225 (84.3 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 71/270 (26%), Positives = 129/270 (47%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GH + + +S +G+ L S + + W G L GH I+ ++W +
Sbjct: 37 GHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCK-KTLYGHSLEISDVAW-----S 90
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVW 266
+ R VSAS D ++WD+ KC+ L GH+ V C + +I +GS D ++K+W
Sbjct: 91 SDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIW 150
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQY--SSPEEMKKAALE---- 319
E GK ++ L H ++++ + +L +G++D + + +S + ++ A E
Sbjct: 151 EVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPP 210
Query: 320 -RYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FSPDGQ-WV 375
+ K N + +++ + D T+ LW+ + + KT TGH+ ++ FS G+ WV
Sbjct: 211 VSFVKFSPNG-KYILTATLDNTLKLWDYSRGRCLKT-YTGHKNEKYCLFASFSVTGRKWV 268
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
S S D + +WN T + V +GH V
Sbjct: 269 VSGSEDNMVYIWNLQTKEIVQRLQGHTDVV 298
Score = 219 (82.2 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 63/225 (28%), Positives = 108/225 (48%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH I+ + + P N S++ D IW C L GH+L ++ V W
Sbjct: 35 LAGHSAAISSVKFSP---NGEW--LASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAW 89
Query: 249 GGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGK- 305
D + + S D T+KVW+ GK ++ LKGH +V + L +G+FD + K
Sbjct: 90 SSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKI 149
Query: 306 -QYSSPEEMK--KAALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + + +K A + + + N L VSGS D +W+ A + +T
Sbjct: 150 WEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNP 209
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY 406
V+ V FSP+G+++ +A+ D ++KLW+ + G+ + + GH Y
Sbjct: 210 PVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKY 254
Score = 198 (74.8 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 53/218 (24%), Positives = 104/218 (47%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GH++ V F+P + SGS D +V++W++ T + + H + + + +
Sbjct: 114 KCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNF 173
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
+ +G +VSGS G + WD +G+ ++ + + P N + ++A+
Sbjct: 174 NCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSP---NG--KYILTATL 228
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCV----KWGGDGVIYTGSQDCTIKVWETTQGKLI 274
D ++WD S +C+ +GH C+ G + +GS+D + +W +++
Sbjct: 229 DNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIV 288
Query: 275 RELKGHGHWVNSLALS-TEYALRTGAF--DHTGKQYSS 309
+ L+GH V S A T+ + + A D T K +SS
Sbjct: 289 QRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWSS 326
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 46/185 (24%), Positives = 89/185 (48%)
Query: 234 ICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
+ L+GH+ A++ VK+ +G + + + D I +W G + L GH ++ +A S++
Sbjct: 33 LTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSD 92
Query: 293 YA-LRTGAFDHTGKQYSSPEEMKKAALERYNKI----KGNAPERL-VSGSDDFTMFLWEP 346
+ L + + D T K + L+ ++ N P L VSGS D ++ +WE
Sbjct: 93 SSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEV 152
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGP-V 405
K KT ++ H ++ V F+ +G + S S+D ++W+ +G+ + P V
Sbjct: 153 KTGKCLKT-LSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPV 211
Query: 406 YQIRF 410
++F
Sbjct: 212 SFVKF 216
Score = 143 (55.4 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 51/192 (26%), Positives = 82/192 (42%)
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDF 339
+G W+ S A + GA+D K+ + +LE + + RLVS SDD
Sbjct: 50 NGEWLASSAADALIII-WGAYDGNCKK-----TLYGHSLEISDVAWSSDSSRLVSASDDK 103
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFR 399
T+ +W+ K KT + GH V F+P + S SFD+S+K+W TGK +
Sbjct: 104 TLKVWDMRSGKCLKT-LKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLS 162
Query: 400 GHVGPVYQIRFE----LIYCFRYPS--NFYCVVDMSCC----------MSLYSWSADSRL 443
H P+ + F LI Y + C +S +S + +
Sbjct: 163 AHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKY 222
Query: 444 LLSGSKDSTLKV 455
+L+ + D+TLK+
Sbjct: 223 ILTATLDNTLKL 234
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 305 (112.4 bits), Expect = 4.4e-27, P = 4.4e-27
Identities = 88/302 (29%), Positives = 142/302 (47%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
+TI GHT+++ +V FSP G+ L + S D TV++W+++ + TGHK V AWSAD
Sbjct: 73 STIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSAD 132
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
K +V+ S L+ ++ T K + L GH ++ ++ P VS S D
Sbjct: 133 SKSIVTASDDKTLKIYEVPTVKMA-KTLKGHTNYVFCCNFNP-----QSSLVVSGSFDES 186
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT-GSQDCTIKVWETTQGKLIREL--- 277
RIWDV CV L H+ V+ V + DG + T GS D +++W+T G+ ++ L
Sbjct: 187 VRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDD 246
Query: 278 ----------KGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN 327
+G ++ S L L T KQY E K ++ G
Sbjct: 247 ENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGG- 305
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF--DKSIK 385
+ ++SGS+D +++W +K+ + GH Q V P +AS + D +I+
Sbjct: 306 --KWIISGSEDCKIYVWN-LQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIR 362
Query: 386 LW 387
+W
Sbjct: 363 IW 364
Score = 245 (91.3 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 68/238 (28%), Positives = 118/238 (49%)
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGDARIWDVSLRKCVICLS 237
P G + + GH K I+ + + +PC +F+ ++S D +IW++S C L+
Sbjct: 65 PGAGYKLISTIEGHTKSISAVKF------SPCGKFLGTSSADKTVKIWNMSDLSCERTLT 118
Query: 238 GHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR 296
GH L V W D I T S D T+K++E K+ + LKGH ++V + + +L
Sbjct: 119 GHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLV 178
Query: 297 -TGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPERLV-SGSDDFTMFLWEPAVSK 350
+G+FD + + + M L ++ + N L+ SGS D + +W+ A +
Sbjct: 179 VSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQ 238
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
KT + V V FSP+G+++ S++ D ++KLW+ GK + ++GH Y I
Sbjct: 239 CVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCI 296
Score = 217 (81.4 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 56/209 (26%), Positives = 100/209 (47%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V A+S D + + + S D T++++++ T GH N+V C ++
Sbjct: 113 CERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFN 172
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+VSGS ++ WD +TG L H ++ +S+ N S S D
Sbjct: 173 PQSSLVVSGSFDESVRIWDVRTGM-CVKTLPAHSDPVSAVSF-----NRDGSLITSGSYD 226
Query: 220 GDARIWDVSLRKCVICL-SGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL 277
G RIWD + +CV L V VK+ +G I + + D T+K+W+ +GK +++
Sbjct: 227 GLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQY 286
Query: 278 KGHGHWVNSLALSTEYALRTGAFDHTGKQ 306
+GH + N + +++ G + +G +
Sbjct: 287 QGHEN--NKYCIFANFSVTGGKWIISGSE 313
Score = 206 (77.6 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 51/190 (26%), Positives = 89/190 (46%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
P + + T+ GHT V F+P + SGS D +VR+WD+ T + H + V
Sbjct: 151 PTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSA 210
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
++++ DG + SGS G ++ WD G+ + + + + P N + +S
Sbjct: 211 VSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSP---NG--KYILS 265
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCV-----KWGGDGVIYTGSQDCTIKVWETTQ 270
++ D ++WD K + GH C+ GG +I +GS+DC I VW
Sbjct: 266 SNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWII-SGSEDCKIYVWNLQT 324
Query: 271 GKLIRELKGH 280
++++ L+GH
Sbjct: 325 KEVVQSLEGH 334
Score = 205 (77.2 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 67/270 (24%), Positives = 124/270 (45%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GH + + +S GK L + S ++ W+ + L+GHK + +W +
Sbjct: 77 GHTKSISAVKFSPCGKFLGTSSADKTVKIWN-MSDLSCERTLTGHKLGVNDFAW-----S 130
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVW 266
A + V+AS D +I++V K L GHT V C + ++ +GS D ++++W
Sbjct: 131 ADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIW 190
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYALRT-GAFDHTGKQYSSPE-EMKKAALERYN-- 322
+ G ++ L H V++++ + + +L T G++D + + + + K ++ N
Sbjct: 191 DVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPP 250
Query: 323 ----KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS-PDGQWV 375
K N + ++S + D T+ LW+ K K + GH+ ++ FS G+W+
Sbjct: 251 VAFVKFSPNG-KYILSSNLDNTLKLWDFGKGKTLK-QYQGHENNKYCIFANFSVTGGKWI 308
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
S S D I +WN T + V GH V
Sbjct: 309 ISGSEDCKIYVWNLQTKEVVQSLEGHTQAV 338
Score = 146 (56.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 61/222 (27%), Positives = 100/222 (45%)
Query: 256 TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMK 314
T SQ+ TI KLI ++GH ++++ S L T + D T K ++ +
Sbjct: 57 TTSQESTIP---GAGYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSC 113
Query: 315 KAALERY----NKIKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFS 369
+ L + N +A + +V+ SDD T+ ++E K KT + GH V F+
Sbjct: 114 ERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKT-LKGHTNYVFCCNFN 172
Query: 370 PDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE----LIYCFRYP------ 419
P V S SFD+S+++W+ TG V H PV + F LI Y
Sbjct: 173 PQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIW 232
Query: 420 --SNFYCVV----DMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
+N CV D + ++ +S + + +LS + D+TLK+
Sbjct: 233 DTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKL 274
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 300 (110.7 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 83/315 (26%), Positives = 152/315 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD-G 162
+ H + +VA + G +GS D T +LWD + + GH+N V IA++ G
Sbjct: 88 LRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +GS + W +TGK + GH I +S+ P + S D A
Sbjct: 148 DKIATGSFDKTCKLWSVETGK-CYHTFRGHTAEIVCLSFNP-----QSTLVATGSMDTTA 201
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WD+ + V L+GH+ + + + G I TGS D T+ VWE G+ + L GH
Sbjct: 202 KLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHC 261
Query: 282 HWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALERYN-KIKGNAPE---RLVS-G 335
++S + + +L TG+ D T K + + A L ++ +I + + +L++
Sbjct: 262 AEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATA 321
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T ++ A +++ T++ GH+ ++ + F+P G + + S DK+ ++W+ TG+ +
Sbjct: 322 SADGTARIFS-AATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCL 380
Query: 396 AVFRGHVGPVYQIRF 410
V GH ++ F
Sbjct: 381 QVLEGHTDEIFSCAF 395
Score = 286 (105.7 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 80/293 (27%), Positives = 137/293 (46%)
Query: 103 TIAGHTEAVLSVAFS-PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T+ GH V ++AF+ P G ++A+GS D T +LW + T GH ++C++++
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ 188
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ +GS + WD Q+G+ L+GH I +S+ N R ++ S D
Sbjct: 189 STLVATGSMDTTAKLWDIQSGEEVFT-LTGHSAEIISLSF-----NTSGNRIITGSFDHT 242
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGH 280
+W+ + V L GH ++ + D +I TGS D T K+W+ GK + L GH
Sbjct: 243 VTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGH 302
Query: 281 GHWV-NSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGNAP-ERLVS 334
+ +S T + T + D T + +S+ LE + +KI N RL++
Sbjct: 303 DDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLT 362
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
GS D T +W+ A + Q + GH + F+ G + + S D + ++W
Sbjct: 363 GSSDKTARIWD-AQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 261 (96.9 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 66/254 (25%), Positives = 126/254 (49%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T GHT ++ ++F+P +A+GS DTT +LWD+ + +F TGH ++ +++
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSF 227
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
+ G +++GS + W+ TG+ L GH I+ + N C ++ S
Sbjct: 228 NTSGNRIITGSFDHTVTVWEADTGRKVYT-LIGHCAEISSAVF-----NWDCSLILTGSM 281
Query: 219 DGDARIWDVSLRKCVICLSGHTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRE 276
D ++WD KCV L+GH + +C + G +I T S D T +++ + + +
Sbjct: 282 DKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGK-LIATASADGTARIFSAATRECVTK 340
Query: 277 LKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERY-NKIKGNA----PE 330
L+GH ++ ++ + + L TG+ D T + + + LE + ++I A +
Sbjct: 341 LEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGD 400
Query: 331 RLVSGSDDFTMFLW 344
+++GS D T +W
Sbjct: 401 IIITGSKDNTCRIW 414
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 292 (107.8 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 82/299 (27%), Positives = 142/299 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSADG 162
++GH AV ++ F+P G +ASGS D + LW ++ F GHKN +L + W++DG
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+VS S ++ WD +TGK ++ H ++ P P +S S DG A
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQI-KKMAEHSSFVNSCC--PTRRGPPL--IISGSDDGTA 163
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WD+ R + +T V + I+TG D +KVW+ +G+ L+GH
Sbjct: 164 KLWDMRQRGAIQTFPDK-YQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQ 222
Query: 282 HWVNSLALSTEYA-LRTGAFDHT----GKQYSSPEEMKKAALERY------NKIKGN-AP 329
+ ++LS + + L T D+ + +P+ E + N +K + +P
Sbjct: 223 DTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSP 282
Query: 330 E--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+ ++ +GS D + +W+ S++ ++ GH VN F P + S S DK+I L
Sbjct: 283 DGTKVTAGSSDRMVHIWD-TTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYL 340
Score = 184 (69.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 71/287 (24%), Positives = 124/287 (43%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ P+ +GH + V + ++ G + SGS E+ W + L GHK I +
Sbjct: 43 EAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDL 102
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVT--CVKWGGDGVIYTG 257
W + + VSAS D R WDV K + ++ H+ V C G +I +G
Sbjct: 103 HW-----TSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISG 157
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY-ALRTGAFDHTGKQYSSPEEMKKA 316
S D T K+W+ Q I+ + + +++ S + TG D+ K + +
Sbjct: 158 SDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATM 216
Query: 317 ALERY-NKIKGNA--PER---LVSGSDDFTMFLWE--PAVSKQPKTRM-TGHQQLVNH-- 365
LE + + I G + P+ L +G D+ + +W+ P + ++ GHQ
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDN-KLCVWDMRPYAPQNRCVKIFEGHQHNFEKNL 275
Query: 366 --VYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+SPDG V + S D+ + +W+ T+ + + GH G V + F
Sbjct: 276 LKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVF 322
Score = 134 (52.2 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 53/185 (28%), Positives = 76/185 (41%)
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQG-KLIRELKGHG---- 281
SL ++ LSGH AV +K+ G +I +GS D I +W K LKGH
Sbjct: 41 SLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAIL 100
Query: 282 --HWVN--SLALSTEYALRTGAFD-HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGS 336
HW + S +S A+D TGKQ E +G P ++SGS
Sbjct: 101 DLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRG--PPLIISGS 158
Query: 337 DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA 396
DD T LW+ +T +Q + V FS + + D +K+W+ G+
Sbjct: 159 DDGTAKLWDMRQRGAIQTFPDKYQ--ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATM 216
Query: 397 VFRGH 401
GH
Sbjct: 217 TLEGH 221
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 30/99 (30%), Positives = 47/99 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GH-----KNWV 153
T+ GH + + ++ SPDG L + D + +WD+ P +C GH KN +
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLL 276
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGH 192
C +WS DG + +GS + WD T + + L GH
Sbjct: 277 KC-SWSPDGTKVTAGSSDRMVHIWDT-TSRRTIYKLPGH 313
Score = 39 (18.8 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
SWS D + +GS D + +
Sbjct: 279 SWSPDGTKVTAGSSDRMVHI 298
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 288 (106.4 bits), Expect = 4.4e-25, P = 4.4e-25
Identities = 86/303 (28%), Positives = 144/303 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT+++ S FSP G+ L + S D TV++W+++ TGHK V IAWS+D
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +VS S L+ ++ T + + L GH ++ ++ P VS S D
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMT-KTLKGHNNYVFCCNFNP-----QSSLVVSGSFDESV 195
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL---- 277
RIWDV C+ L H+ V+ V + DG +I +GS D +++W+T G+ I+ L
Sbjct: 196 RIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE 255
Query: 278 ---------KGHGHWVNSLALSTEYALRTGAFDH--TGKQYSSPEEMKKAALERYNKIKG 326
+G ++ LA + + L+ F T KQY+ E K ++ G
Sbjct: 256 NPPVAFVKFSPNGKYI--LASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGG 313
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF--DKSI 384
+ ++SGS+D +++W +++ + GH Q V P +AS + D I
Sbjct: 314 ---KWIISGSEDCKIYIWN-LQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKI 369
Query: 385 KLW 387
+W
Sbjct: 370 HIW 372
Score = 233 (87.1 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 66/262 (25%), Positives = 124/262 (47%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFV-SASKDGDARIWDVSLRKCVICLSGHTLAVTCVK 247
L GH K I+ + +PC +++ ++S D +IW++ C L+GH L V +
Sbjct: 83 LEGHTKSISSAKF------SPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 248 WGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGK 305
W D + + S D T+K++E ++ + LKGH ++V + + +L +G+FD + +
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 306 QYSSPEEMKKAALERYNK----IKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQ 360
+ M L ++ + N L+ SGS D + +W+ A + KT +
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDEN 256
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPS 420
V V FSP+G+++ +++ D ++KLW+ + GK + + GH Y I F
Sbjct: 257 PPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFAN----FSVTG 312
Query: 421 NFYCVVDMSCCMSLYSWSADSR 442
+ + C +Y W+ +R
Sbjct: 313 GKWIISGSEDC-KIYIWNLQTR 333
Score = 225 (84.3 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 76/270 (28%), Positives = 119/270 (44%)
Query: 16 TDPEGNPL-GAPMYFPQ-NAGPQQLSQIVN-KLLNNEEKLPYAFYISDHELLVPLGSYLE 72
++P G P GA P NA S N KL+ E + IS + P G YL
Sbjct: 47 SNPTGTPAPGASAQTPNPNAAGASASGSANYKLMCTLEG--HTKSISSAKFS-PCGKYLG 103
Query: 73 KHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTV 132
S +K + I + C T+ GH V +A+S D R + S S D T+
Sbjct: 104 TS--SADKTVKIWNMDHMI--------CERTLTGHKLGVNDIAWSSDSRCVVSASDDKTL 153
Query: 133 RLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGH 192
+++++ T GH N+V C ++ +VSGS ++ WD +TG L H
Sbjct: 154 KIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCI-KTLPAH 212
Query: 193 KKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL-SGHTLAVTCVKWGGD 251
++ +S+ N S S DG RIWD + +C+ L V VK+ +
Sbjct: 213 SDPVSAVSF-----NRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPN 267
Query: 252 G-VIYTGSQDCTIKVWETTQGKLIRELKGH 280
G I + D T+K+W+ ++GK +++ GH
Sbjct: 268 GKYILASNLDSTLKLWDFSKGKTLKQYTGH 297
Score = 214 (80.4 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 69/273 (25%), Positives = 128/273 (46%)
Query: 146 CT--GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
CT GH + +S GK+L + S ++ W+ L+GHK + I+W
Sbjct: 81 CTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWN-MDHMICERTLTGHKLGVNDIAW-- 137
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
++ R VSAS D +I+++ + L GH V C + ++ +GS D +
Sbjct: 138 ---SSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPE-EMKKAALER 320
+++W+ G I+ L H V++++ + + +L +G++D + + + + K ++
Sbjct: 195 VRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDD 254
Query: 321 YNK----IKGNAPERLVSGSD-DFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS-PDG 372
N +K + + + S+ D T+ LW+ + K K + TGH+ ++ FS G
Sbjct: 255 ENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLK-QYTGHENSKYCIFANFSVTGG 313
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
+W+ S S D I +WN T + V GH PV
Sbjct: 314 KWIISGSEDCKIYIWNLQTREIVQCLEGHTQPV 346
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 322 NKIKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
N I ++ R +VS SDD T+ ++E S+ KT + GH V F+P V S SF
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKT-LKGHNNYVFCCNFNPQSSLVVSGSF 191
Query: 381 DKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE----LIYCFRYP--------SNFYCVV-- 426
D+S+++W+ TG + H PV + F LI Y +N C+
Sbjct: 192 DESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTL 251
Query: 427 --DMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
D + ++ +S + + +L+ + DSTLK+
Sbjct: 252 VDDENPPVAFVKFSPNGKYILASNLDSTLKL 282
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 288 (106.4 bits), Expect = 4.4e-25, P = 4.4e-25
Identities = 86/303 (28%), Positives = 144/303 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT+++ S FSP G+ L + S D TV++W+++ TGHK V IAWS+D
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +VS S L+ ++ T + + L GH ++ ++ P VS S D
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMT-KTLKGHNNYVFCCNFNP-----QSSLVVSGSFDESV 195
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL---- 277
RIWDV C+ L H+ V+ V + DG +I +GS D +++W+T G+ I+ L
Sbjct: 196 RIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE 255
Query: 278 ---------KGHGHWVNSLALSTEYALRTGAFDH--TGKQYSSPEEMKKAALERYNKIKG 326
+G ++ LA + + L+ F T KQY+ E K ++ G
Sbjct: 256 NPPVAFVKFSPNGKYI--LASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGG 313
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF--DKSI 384
+ ++SGS+D +++W +++ + GH Q V P +AS + D I
Sbjct: 314 ---KWIISGSEDCKIYIWN-LQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKI 369
Query: 385 KLW 387
+W
Sbjct: 370 HIW 372
Score = 233 (87.1 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 66/262 (25%), Positives = 124/262 (47%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFV-SASKDGDARIWDVSLRKCVICLSGHTLAVTCVK 247
L GH K I+ + +PC +++ ++S D +IW++ C L+GH L V +
Sbjct: 83 LEGHTKSISSAKF------SPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 248 WGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGK 305
W D + + S D T+K++E ++ + LKGH ++V + + +L +G+FD + +
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 306 QYSSPEEMKKAALERYNK----IKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQ 360
+ M L ++ + N L+ SGS D + +W+ A + KT +
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDEN 256
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPS 420
V V FSP+G+++ +++ D ++KLW+ + GK + + GH Y I F
Sbjct: 257 PPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFAN----FSVTG 312
Query: 421 NFYCVVDMSCCMSLYSWSADSR 442
+ + C +Y W+ +R
Sbjct: 313 GKWIISGSEDC-KIYIWNLQTR 333
Score = 225 (84.3 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 76/270 (28%), Positives = 119/270 (44%)
Query: 16 TDPEGNPL-GAPMYFPQ-NAGPQQLSQIVN-KLLNNEEKLPYAFYISDHELLVPLGSYLE 72
++P G P GA P NA S N KL+ E + IS + P G YL
Sbjct: 47 SNPTGTPAPGASAQTPNPNAAGASASGSANYKLMCTLEG--HTKSISSAKFS-PCGKYLG 103
Query: 73 KHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTV 132
S +K + I + C T+ GH V +A+S D R + S S D T+
Sbjct: 104 TS--SADKTVKIWNMDHMI--------CERTLTGHKLGVNDIAWSSDSRCVVSASDDKTL 153
Query: 133 RLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGH 192
+++++ T GH N+V C ++ +VSGS ++ WD +TG L H
Sbjct: 154 KIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCI-KTLPAH 212
Query: 193 KKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL-SGHTLAVTCVKWGGD 251
++ +S+ N S S DG RIWD + +C+ L V VK+ +
Sbjct: 213 SDPVSAVSF-----NRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPN 267
Query: 252 G-VIYTGSQDCTIKVWETTQGKLIRELKGH 280
G I + D T+K+W+ ++GK +++ GH
Sbjct: 268 GKYILASNLDSTLKLWDFSKGKTLKQYTGH 297
Score = 214 (80.4 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 69/273 (25%), Positives = 128/273 (46%)
Query: 146 CT--GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
CT GH + +S GK+L + S ++ W+ L+GHK + I+W
Sbjct: 81 CTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWN-MDHMICERTLTGHKLGVNDIAW-- 137
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
++ R VSAS D +I+++ + L GH V C + ++ +GS D +
Sbjct: 138 ---SSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPE-EMKKAALER 320
+++W+ G I+ L H V++++ + + +L +G++D + + + + K ++
Sbjct: 195 VRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDD 254
Query: 321 YNK----IKGNAPERLVSGSD-DFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS-PDG 372
N +K + + + S+ D T+ LW+ + K K + TGH+ ++ FS G
Sbjct: 255 ENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLK-QYTGHENSKYCIFANFSVTGG 313
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
+W+ S S D I +WN T + V GH PV
Sbjct: 314 KWIISGSEDCKIYIWNLQTREIVQCLEGHTQPV 346
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 322 NKIKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
N I ++ R +VS SDD T+ ++E S+ KT + GH V F+P V S SF
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKT-LKGHNNYVFCCNFNPQSSLVVSGSF 191
Query: 381 DKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE----LIYCFRYP--------SNFYCVV-- 426
D+S+++W+ TG + H PV + F LI Y +N C+
Sbjct: 192 DESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTL 251
Query: 427 --DMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
D + ++ +S + + +L+ + DSTLK+
Sbjct: 252 VDDENPPVAFVKFSPNGKYILASNLDSTLKL 282
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 288 (106.4 bits), Expect = 4.4e-25, P = 4.4e-25
Identities = 83/299 (27%), Positives = 139/299 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT A+ V FS DG LAS S D T+ LW + + + GH + + +AWS+D
Sbjct: 38 TLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDS 97
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ S S L+ WD ++ L GH ++ +++ P P VS S D
Sbjct: 98 HYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNP-----PSNLIVSGSFDETI 152
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
RIW+V KCV + H++ ++ V + DG +I + S D + K+W+ +G ++ L
Sbjct: 153 RIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDK 212
Query: 282 HWVNSLALSTEYA--LRTGAFDHTGK--QYSSPEEMKKAALERYNKI-------KGNAPE 330
S A + + D T K Y++ + +K NK+ +
Sbjct: 213 SPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLK-VYTGHTNKVFCITSAFSVTNGK 271
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS--FDKSIKLW 387
+VSGS+D ++LW+ ++ R+ GH V V P ++S+ DK+I++W
Sbjct: 272 YIVSGSEDNCVYLWD-LQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 202 (76.2 bits), Expect = 9.3e-14, P = 9.3e-14
Identities = 67/254 (26%), Positives = 115/254 (45%)
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT--GSQDCTIKVWETTQG- 271
SAS D +W + + GH+ ++ + W D YT S DCT+++W+
Sbjct: 60 SASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSH-YTCSASDDCTLRIWDARSPY 118
Query: 272 KLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE----EMKKAALERYNKIKG 326
+ ++ L+GH ++V + + L +G+FD T + + M KA + +
Sbjct: 119 ECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHF 178
Query: 327 NAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
N L VS S D + +W+ KT + V+ FSP+G+++ A+ D ++K
Sbjct: 179 NRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLK 238
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
L N TGKF+ V+ GH V+ I F + Y +V S +Y W +R +L
Sbjct: 239 LSNYATGKFLKVYTGHTNKVFCITS----AFSVTNGKY-IVSGSEDNCVYLWDLQARNIL 293
Query: 446 S---GSKDSTLKVT 456
G D+ + V+
Sbjct: 294 QRLEGHTDAVISVS 307
Score = 172 (65.6 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 49/203 (24%), Positives = 92/203 (45%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ R C + GHT V V F+P + SGS D T+R+W++ T + H
Sbjct: 111 IWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
+ + ++ DG +VS S G + WD + G + ++ + P N
Sbjct: 171 MPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSP---NG-- 225
Query: 211 RRFVS-ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG---GDG-VIYTGSQDCTIKV 265
+F+ A+ D ++ + + K + +GHT V C+ +G I +GS+D + +
Sbjct: 226 -KFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYL 284
Query: 266 WETTQGKLIRELKGHGHWVNSLA 288
W+ +++ L+GH V S++
Sbjct: 285 WDLQARNILQRLEGHTDAVISVS 307
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 306 (112.8 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 94/311 (30%), Positives = 142/311 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C + GH AVLSV++S D R LAS S D TV++WD T + GH + V + +S
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
D + L S S + ++ WD TG + L GH+ W+ + + H + SAS D
Sbjct: 348 HDSRLLASASDS-TVKIWDTGTGSLQ-HTLEGHRDWVRSVIFS--H---DSQLLASASDD 400
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELK 278
+IWD L GH V V + D ++ + S D T+K+W+T G L L+
Sbjct: 401 STVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLE 460
Query: 279 GHGHWVNSLALSTEYALRTGAFD-HTGKQYSSPEEMKKAALERYNKIKGNAP----ERLV 333
GH WV S+ S + L A D T + + + + K LE ++ + + RL+
Sbjct: 461 GHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLL 520
Query: 334 -SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
S S+D T+ +W+ + R H F D + + FDK+ LW T
Sbjct: 521 ASASNDQTVRIWDI------EARSLQHT-------FDLDAT-IEAMRFDKATSLWIQVTV 566
Query: 393 KFVAVFRGHVG 403
K A R +G
Sbjct: 567 K--ASIRSAMG 575
Score = 248 (92.4 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 68/233 (29%), Positives = 103/233 (44%)
Query: 184 PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV 243
P L GH+ + +S+ H R SAS D +IWD L GH+ V
Sbjct: 287 PCLQALEGHEAAVLSVSYS--H---DSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLV 341
Query: 244 TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDH- 302
V + D + + D T+K+W+T G L L+GH WV S+ S + L A D
Sbjct: 342 RSVIFSHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDS 401
Query: 303 TGKQYSSPEEMKKAALERYNK-----IKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
T K + + + LE + I + + L S SDD T+ +W+ T +
Sbjct: 402 TVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHT-LE 460
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
GH+ V V FS D + +ASAS D+++++W+ G GH V + F
Sbjct: 461 GHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSF 513
Score = 140 (54.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 43/139 (30%), Positives = 64/139 (46%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S SDD T+ +W+ T + GH+ V V FS D Q +ASAS D ++K+W+ T
Sbjct: 394 LASASDDSTVKIWDTGTGSLQHT-LEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 452
Query: 392 GKFVAVFRGHVGPVYQIRFE---------------LIYCFRYPSNFYCVVDMSCCMSLYS 436
G GH V + F I+ S+ + + S ++ S
Sbjct: 453 GSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVS 512
Query: 437 WSADSRLLLSGSKDSTLKV 455
+S DSRLL S S D T+++
Sbjct: 513 FSHDSRLLASASNDQTVRI 531
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 294 (108.6 bits), Expect = 7.1e-25, P = 7.1e-25
Identities = 84/292 (28%), Positives = 135/292 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +AV SV FS + +QLASGS D+ + +W + QT ++ GHK+ V C+ +S G L
Sbjct: 17 GHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
SGS+ ++ W P K H + VH + + FV+AS D ++W
Sbjct: 77 ASGSRDKTVRIWVPNV-KGESTVFRAHTATVRS-----VHFCSDGQSFVTASDDKTVKVW 130
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
+K + LS H V C K+ DG +I + S D T+K+W+ T + + HG +V
Sbjct: 131 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 285 NSLALSTE-YALRTGAFDHTGKQYS-------SPEEMKKAALERYN-KIKGNAPERLVSG 335
+ + D+T K + ++ AA+ + GN LV+
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY---LVTA 247
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GHQ V FS G++ AS D+ + +W
Sbjct: 248 SSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 242 (90.2 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 59/205 (28%), Positives = 98/205 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ + S D TV++W + Q +F + H NWV C +S
Sbjct: 96 STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSP 155
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD +T + + H ++T + + P + C +A D
Sbjct: 156 DGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHP---SGTC--IAAAGMDN 209
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WDV + + H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHG 269
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H ++A S RTG + +G
Sbjct: 270 HQGPATTVAFS-----RTGEYFASG 289
Score = 235 (87.8 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 71/218 (32%), Positives = 102/218 (46%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ ++P R + AGH +AV V FSP G LASGS D TVR+W N + H
Sbjct: 45 VWHMKPQTR-AYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHT 103
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
V + + +DG+ V+ S ++ W K + LS H W+ + P
Sbjct: 104 ATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFS-LSQHINWVRCAKFSP-----DG 157
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETT 269
R VSAS D ++WD + R+CV H VT V + G I D T+KVW+
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 217
Query: 270 QGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGK 305
+L++ + H VN+L+ S Y L T + D T K
Sbjct: 218 THRLLQHYQLHSAAVNALSFHPSGNY-LVTASSDSTLK 254
Score = 221 (82.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 76/274 (27%), Positives = 119/274 (43%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWD--PQTGKPSGNPLSGHKKWITGISWEPV- 204
GH++ V + +S + K L SGS L W PQT +GHK +T +++ P
Sbjct: 17 GHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQT---RAYRFAGHKDAVTCVNFSPSG 73
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
HL A S S+D RIW +++ HT V V + DG + T S D T+
Sbjct: 74 HLLA------SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTV 127
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDH-TGKQYS-SPEEMKKAALER- 320
KVW T + K + L H +WV S + L A D T K + + E + E
Sbjct: 128 KVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 187
Query: 321 ----YNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVA 376
Y + +G D+ T+ +W+ + + H VN + F P G ++
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDN-TVKVWDVRTHRLLQHYQL-HSAAVNALSFHPSGNYLV 245
Query: 377 SASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+AS D ++K+ + G+ + GH GP + F
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF 279
Score = 118 (46.6 bits), Expect = 0.00051, P = 0.00051
Identities = 44/142 (30%), Positives = 63/142 (44%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
++L SGS D + +W + Q + R GH+ V V FSP G +AS S DK++++W
Sbjct: 32 KQLASGSMDSCLMVWH--MKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWV 89
Query: 389 GTTGKFVAVFRGHVGPVYQIRF-ELIYCFRYPSNFYCVVDMSCCMS--LYS------W-- 437
VFR H V + F F S+ V S L+S W
Sbjct: 90 PNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVR 149
Query: 438 ----SADSRLLLSGSKDSTLKV 455
S D RL++S S D T+K+
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKL 171
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 285 (105.4 bits), Expect = 9.6e-25, P = 9.6e-25
Identities = 86/309 (27%), Positives = 143/309 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +A+ SV FS + +QLASGS D+ +++W + Q + GHK+ V+C+ +S G HL
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSG-HL 76
Query: 166 V-SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
V SGS+ + W P K H + VH ++ + V+AS D ++
Sbjct: 77 VASGSRDKTVCLWVPSV-KGESTVFKAHTATVRS-----VHFSSDGQSLVTASDDKTIKV 130
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W V +K + LS H V C ++ DG +I + S D T+K+W+ T + I HG +
Sbjct: 131 WTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGF 190
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERY-------NKIKGN-APERLVS 334
N + + D T K + M + L+ Y N + + + L++
Sbjct: 191 ANHVEFHPSGTCIAAAGTDKTVKVWDV--RMNRL-LQHYQVHTAAVNSLSFHPSGNYLIT 247
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW--NGTTG 392
S+D T+ + + + T + GHQ V FS G + AS D+ + +W N +
Sbjct: 248 ASNDSTLKILDLLEGRLLYT-LHGHQGPATCVAFSRTGDFFASGGSDEQVMVWKTNFSAA 306
Query: 393 KFVAVFRGH 401
+ V + H
Sbjct: 307 DYDGVLKTH 315
Score = 244 (91.0 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 60/205 (29%), Positives = 98/205 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV FS DG+ L + S D T+++W ++ Q +F + H NWV C +S
Sbjct: 97 STVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSP 156
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ + S S ++ WD +T + + H + + + P + C +A D
Sbjct: 157 DGRLIASASDDKTVKLWD-KTSRECIHSFCEHGGFANHVEFHP---SGTC--IAAAGTDK 210
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WDV + + + HT AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 211 TVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHG 270
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H +A S RTG F +G
Sbjct: 271 HQGPATCVAFS-----RTGDFFASG 290
Score = 223 (83.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 67/220 (30%), Positives = 105/220 (47%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW--DLNTQTPMFKCTG 148
++ ++P R + GH +AV+ V FSP G +ASGS D TV LW + ++ +FK
Sbjct: 46 IWSMKPQMRAYCLV-GHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKA-- 102
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA 208
H V + +S+DG+ LV+ S ++ W K + LS H W+ + P
Sbjct: 103 HTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFS-LSQHINWVRCARFSP----- 156
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
R SAS D ++WD + R+C+ H V++ G I D T+KVW+
Sbjct: 157 DGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWD 216
Query: 268 TTQGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGK 305
+L++ + H VNSL+ S Y + T + D T K
Sbjct: 217 VRMNRLLQHYQVHTAAVNSLSFHPSGNYLI-TASNDSTLK 255
Score = 214 (80.4 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 65/228 (28%), Positives = 115/228 (50%)
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GH+ IT + + LN ++ S S D +IW + + CL GH AV CV++
Sbjct: 18 GHRDAITSVDFS---LNK--KQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSP 72
Query: 251 DG-VIYTGSQDCTIKVW-ETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQY 307
G ++ +GS+D T+ +W + +G+ K H V S+ S++ +L T + D T K +
Sbjct: 73 SGHLVASGSRDKTVCLWVPSVKGEST-VFKAHTATVRSVHFSSDGQSLVTASDDKTIKVW 131
Query: 308 SSPEEMKKAALERY-NKIKGN--APE-RLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
+ + +L ++ N ++ +P+ RL+ S SDD T+ LW+ S++ H
Sbjct: 132 TVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKT-SRECIHSFCEHGGF 190
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
NHV F P G +A+A DK++K+W+ + + ++ H V + F
Sbjct: 191 ANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSF 238
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R +NR HT AV S++F P G L + S D+T+++ DL ++ GH+
Sbjct: 214 VWDVR-MNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQ 272
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCW 177
C+A+S G SG ++ W
Sbjct: 273 GPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 115 (45.5 bits), Expect = 0.00071, P = 0.00071
Identities = 43/142 (30%), Positives = 65/142 (45%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+ LV+ SDD T+ +W V +Q ++ H V FSPDG+ +ASAS DK++KLW+
Sbjct: 117 QSLVTASDDKTIKVW--TVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWD 174
Query: 389 GTTGKFVAVFRGHVGPVYQIRFELI-YCFRYPSNFYCV----VDMSCCMSLY-------- 435
T+ + + F H G + F C V V M+ + Y
Sbjct: 175 KTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVN 234
Query: 436 --SWSADSRLLLSGSKDSTLKV 455
S+ L++ S DSTLK+
Sbjct: 235 SLSFHPSGNYLITASNDSTLKI 256
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 285 (105.4 bits), Expect = 9.6e-25, P = 9.6e-25
Identities = 83/292 (28%), Positives = 135/292 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +AV V FS + +QLASGS D+ + +W + Q+ ++ TGHK+ V C+ +S G L
Sbjct: 48 GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 107
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
SGS+ ++ W P K H + VH + + FV+AS D ++W
Sbjct: 108 ASGSRDKTVRIWVPNI-KGESTVFRAHTATVRS-----VHFCSDGQSFVTASDDKTIKVW 161
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
+K + LS H V C K+ DG +I + S D T+K+W+ T + + HG +V
Sbjct: 162 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 221
Query: 285 NSLALSTE-YALRTGAFDHTGKQYS-------SPEEMKKAALERYN-KIKGNAPERLVSG 335
+ + D+T K + ++ AA+ + GN LV+
Sbjct: 222 TYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY---LVTA 278
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GHQ V FS G++ AS D+ + +W
Sbjct: 279 SSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 240 (89.5 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 58/205 (28%), Positives = 98/205 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ + S D T+++W + Q +F + H NWV C +S
Sbjct: 127 STVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSP 186
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD +T + + H ++T + + P + C +A D
Sbjct: 187 DGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHP---SGTC--VAAAGMDN 240
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WDV + + H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 241 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHG 300
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H ++A S RTG + +G
Sbjct: 301 HQGPATTVAFS-----RTGEYFASG 320
Score = 228 (85.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 77/274 (28%), Positives = 119/274 (43%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP--LSGHKKWITGISWEPV- 204
GH++ V C+ +S + K L SGS L W KP +GHK +T +++ P
Sbjct: 48 GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHM---KPQSRAYRFTGHKDAVTCVNFSPSG 104
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
HL A S S+D RIW +++ HT V V + DG + T S D TI
Sbjct: 105 HLLA------SGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTI 158
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDH-TGKQYS-SPEEMKKAALER- 320
KVW T + K + L H +WV S + L A D T K + + E + E
Sbjct: 159 KVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 218
Query: 321 ----YNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVA 376
Y + +G D+ T+ +W+ + + H VN + F P G ++
Sbjct: 219 GFVTYVDFHPSGTCVAAAGMDN-TVKVWDVRTHRLLQHYQL-HSAAVNALSFHPSGNYLV 276
Query: 377 SASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+AS D ++K+ + G+ + GH GP + F
Sbjct: 277 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF 310
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 44/142 (30%), Positives = 64/142 (45%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
++L SGS D + +W + Q + R TGH+ V V FSP G +AS S DK++++W
Sbjct: 63 KQLASGSMDSCLMVWH--MKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWV 120
Query: 389 GTTGKFVAVFRGHVGPVYQIRF-ELIYCFRYPSNFYCVVDMSCCMS--LYS------W-- 437
VFR H V + F F S+ + S L+S W
Sbjct: 121 PNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVR 180
Query: 438 ----SADSRLLLSGSKDSTLKV 455
S D RL++S S D T+K+
Sbjct: 181 CAKFSPDGRLIVSASDDKTVKL 202
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 284 (105.0 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 72/206 (34%), Positives = 102/206 (49%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+AGH V S FSPDGR +AS S D ++RLWD+ + GH+ V +++S D K
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSK 123
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L SG W+ Q+G+ + L GH I + P + + S D
Sbjct: 124 QLASGGWDKRAIVWEVQSGRRV-HLLVGHCDSIQSSDFSPTSDS-----LATGSWDSTVH 177
Query: 224 IWDVSLRKCVIC---LSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
IWD+ V+ L GHT ++C+ + G++ +GS D TI VW+ T L +LKGH
Sbjct: 178 IWDLRASTPVVSYHNLEGHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGH 237
Query: 281 GHWVNSLALST-EYALRTGAFDHTGK 305
WVNSLA S E L + + T K
Sbjct: 238 TIWVNSLAFSPDELKLASAGYSRTVK 263
Score = 275 (101.9 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 78/261 (29%), Positives = 122/261 (46%)
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA 208
H V C A+S DG+ L++ S G + W ++G+ L+GH+ + + P
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWR-LAGHRGPVKSCCFSP----- 78
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
R S+S D R+WDV+ KC+ L GH +V V + D + +G D VWE
Sbjct: 79 DGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWE 138
Query: 268 TTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG 326
G+ + L GH + S S T +L TG++D T + + G
Sbjct: 139 VQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTG 198
Query: 327 N-------APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
N A L SGS D T+ +W+P + P ++ GH VN + FSPD +ASA
Sbjct: 199 NISCLCYSASGLLASGSWDKTICVWKPTTNNLP-LQLKGHTIWVNSLAFSPDELKLASAG 257
Query: 380 FDKSIKLWNGTTGKFVAVFRG 400
+ +++K+W+ TGK + +G
Sbjct: 258 YSRTVKVWDCLTGKCLETLKG 278
Score = 215 (80.7 bits), Expect = 6.6e-16, P = 6.6e-16
Identities = 73/283 (25%), Positives = 129/283 (45%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
H E S AFSPDGR L + S D V +W + +++ GH+ V +S DG+ +
Sbjct: 26 HGEVNCS-AFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 167 SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
S S ++ WD K + L GH++ + +S+ P ++ S D A +W+
Sbjct: 85 SSSSDHSIRLWDVARSKCL-HVLKGHQRSVETVSFSP-----DSKQLASGGWDKRAIVWE 138
Query: 227 VSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE---TTQGKLIRELKGHGH 282
V + V L GH ++ + + TGS D T+ +W+ +T L+GH
Sbjct: 139 VQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTG 198
Query: 283 WVNSLALSTEYALRTGAFDHT---GKQYSS--PEEMKKAALERYNKIKGNAPE-RLVSGS 336
++ L S L +G++D T K ++ P ++K + N + + E +L S
Sbjct: 199 NISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIW-VNSLAFSPDELKLASAG 257
Query: 337 DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
T+ +W+ K +T + G + + F+PDG+ + S +
Sbjct: 258 YSRTVKVWDCLTGKCLET-LKGMLDVAHACIFTPDGKLLVSGA 299
Score = 188 (71.2 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 51/185 (27%), Positives = 85/185 (45%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
++C + GH +V +V+FSPD +QLASG D +W++ + + GH + +
Sbjct: 100 SKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSD 159
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKP--SGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+S L +GS + WD + P S + L GH I+ + + L A S
Sbjct: 160 FSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGLLA------S 213
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLI 274
S D +W + + L GHT+ V + + D + + + T+KVW+ GK +
Sbjct: 214 GSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCL 273
Query: 275 RELKG 279
LKG
Sbjct: 274 ETLKG 278
Score = 171 (65.3 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 54/209 (25%), Positives = 99/209 (47%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETT 269
R ++AS DG +W + + L+GH V + DG +I + S D +I++W+
Sbjct: 39 RTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVA 98
Query: 270 QGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERY-NKIKGN 327
+ K + LKGH V +++ S + L +G +D + + L + + I+ +
Sbjct: 99 RSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSS 158
Query: 328 --AP--ERLVSGSDDFTMFLWEPAVSKQPKT--RMTGHQQLVNHVYFSPDGQWVASASFD 381
+P + L +GS D T+ +W+ S + + GH ++ + +S G +AS S+D
Sbjct: 159 DFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGL-LASGSWD 217
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
K+I +W TT +GH V + F
Sbjct: 218 KTICVWKPTTNNLPLQLKGHTIWVNSLAF 246
Score = 126 (49.4 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 43/177 (24%), Positives = 74/177 (41%)
Query: 239 HTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-R 296
H V C + DG + T S D + VW T G+L+ L GH V S S + L
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGN---APE--RLVSGSDDFTMFLWEPAVSKQ 351
+ + DH+ + + L+ + + +P+ +L SG D +WE ++
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRR 144
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFR---GHVGPV 405
+ GH + FSP +A+ S+D ++ +W+ V + GH G +
Sbjct: 145 VHL-LVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNI 200
Score = 37 (18.1 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 432 MSLYSWSADSRLLLSGSKDSTLKV 455
+S +SA S LL SGS D T+ V
Sbjct: 200 ISCLCYSA-SGLLASGSWDKTICV 222
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 299 (110.3 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 88/297 (29%), Positives = 139/297 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V ++A PD + ASG+GD T+++WDL + TGH + V +A S
Sbjct: 197 ISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPRHP 256
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S ++ ++CWD +T K + GH + ++ P L+ V+ +DG AR
Sbjct: 257 YLFSCAEDKMVKCWDLETNKVIRH-YHGHLSGVYTLALHPT-LDV----LVTGGRDGVAR 310
Query: 224 IWDVSLRKCVICLSGHTLAVT-CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+WD+ R + LSGHT V+ V D + TGS D T+++W+ GK + L H
Sbjct: 311 VWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKK 370
Query: 283 WVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V +LA TE+ +G+ KQ+ PE E +N I N SG+D
Sbjct: 371 GVRALATHPTEFTFASGSAGSI-KQWKCPEGAFMQNFEGHNSIINTLSVNDQNVFFSGAD 429
Query: 338 DFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVY---FSPDGQWVASASFDKSIKLW 387
+ +M W+ + T G Q + ++ F G + DK+IK+W
Sbjct: 430 NGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIFTSTFDQSGSRLICGEADKTIKIW 486
Score = 204 (76.9 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 68/269 (25%), Positives = 120/269 (44%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
R T+ GH V +A SP L S + D V+ WDL T + GH + V +A
Sbjct: 234 RLRLTLTGHISTVRGLAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLAL 293
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
LV+G + G + WD +T + + + LSGH TG E V A + ++ S
Sbjct: 294 HPTLDVLVTGGRDGVARVWDMRT-RSNIHVLSGH----TGTVSELVCQEAD-PQVITGSL 347
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D R+WD++ K + L+ H V + + +IK W+ +G ++ +
Sbjct: 348 DSTVRMWDLAAGKTMGVLTHHKKGVRALATHPTEFTFASGSAGSIKQWKCPEGAFMQNFE 407
Query: 279 GHGHWVNSLALSTEYALRTGA-------FD-HTGKQYSSPEEMKK-AALER----YNKIK 325
GH +N+L+++ + +GA +D TG ++ S + + +L+ +
Sbjct: 408 GHNSIINTLSVNDQNVFFSGADNGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIFTSTF 467
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKT 354
+ RL+ G D T+ +W+ + P+T
Sbjct: 468 DQSGSRLICGEADKTIKIWKEDMEATPET 496
Score = 167 (63.8 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 58/220 (26%), Positives = 97/220 (44%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ ++ EP + + F S + D +IWD++ + + L+GH V +
Sbjct: 197 ISGHLGWVRALAVEPDN-----KWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAV 251
Query: 249 GG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ ++D +K W+ K+IR GH V +LAL T L TG D +
Sbjct: 252 SPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARV 311
Query: 307 YSSPEEMKKAALERYNK-----IKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ L + + A ++++GS D T+ +W+ A K +T H++
Sbjct: 312 WDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGV-LTHHKK 370
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V + P AS S SIK W G F+ F GH
Sbjct: 371 GVRALATHPTEFTFASGSAG-SIKQWKCPEGAFMQNFEGH 409
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 280 (103.6 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 79/292 (27%), Positives = 135/292 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +AV V FS + + LASGS D+T+ +W + Q+ ++ TGHK+ V C+ +S G L
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
SGS+ ++ W P K H + VH + + V+AS D ++W
Sbjct: 77 ASGSRDKTVRIWVPNV-KGESTVFRAHTATVRS-----VHFCSDGQLLVTASDDKTVKVW 130
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
++ + L+ H V C K+ DG +I + S D T+K+W+ T + + HG +V
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 285 NSLALSTE-YALRTGAFDHTGKQYSSPE-------EMKKAALERYN-KIKGNAPERLVSG 335
+ + D+T K + + ++ AA+ + GN L++
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNY---LITA 247
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GHQ V FS G++ AS D+ + +W
Sbjct: 248 SSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 247 (92.0 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 61/205 (29%), Positives = 98/205 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ L + S D TV++W + Q +F T H NWV C +S
Sbjct: 96 STVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSP 155
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD +T + + H ++T + + P + C +A D
Sbjct: 156 DGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHP---SGTC--IAAAGMDN 209
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WD + V H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 210 TVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 269
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H ++A S RTG + +G
Sbjct: 270 HQGPATTVAFS-----RTGEYFASG 289
Score = 239 (89.2 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 76/274 (27%), Positives = 121/274 (44%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP--LSGHKKWITGISWEPV- 204
GH++ V C+ +S + KHL SGS L W KP +GHK +T +++ P
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHM---KPQSRAYRFTGHKDAVTCVNFSPSG 73
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
HL A S S+D RIW +++ HT V V + DG ++ T S D T+
Sbjct: 74 HLLA------SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTV 127
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDH-TGKQYS-SPEEMKKAALER- 320
KVW T + + + L H +WV S + L A D T K + + E + E
Sbjct: 128 KVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 187
Query: 321 ----YNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVA 376
Y + +G D+ T+ +W+ + + H VN + F P G ++
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDN-TVKVWDTRTHRLVQHYQL-HSAAVNALSFHPSGNYLI 245
Query: 377 SASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+AS D ++K+ + G+ + GH GP + F
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF 279
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 43/142 (30%), Positives = 63/142 (44%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+ L SGS D T+ +W + Q + R TGH+ V V FSP G +AS S DK++++W
Sbjct: 32 KHLASGSMDSTLMIWH--MKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWV 89
Query: 389 GTTGKFVAVFRGHVGPVYQIRF----ELIYCFRYPSNF--YCVVDMSCCMSL---YSW-- 437
VFR H V + F +L+ + SL +W
Sbjct: 90 PNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVR 149
Query: 438 ----SADSRLLLSGSKDSTLKV 455
S D RL++S S D T+K+
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKL 171
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 290 (107.1 bits), Expect = 5.4e-24, P = 5.4e-24
Identities = 82/316 (25%), Positives = 154/316 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD-G 162
+ H + +VA + G +GS D T ++WD + + GH+N V IA++ G
Sbjct: 88 LRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +GS + W +TGK + GH I +S+ P + S D A
Sbjct: 148 DKIATGSFDKTCKLWSAETGK-CYHTFRGHTAEIVCLSFNPQSTVV-----ATGSMDTTA 201
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + V+ L+GH + + + GD +I TGS D T+ VW+ + G+ + L GH
Sbjct: 202 KLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRII-TGSFDHTVVVWDASTGRKVHTLIGH 260
Query: 281 GHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALERYN-KIKGNAPE---RLVS- 334
++S S + +L TG+ D T + + A L ++ +I + + +L++
Sbjct: 261 CAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIAT 320
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
S D T ++ A +++ T++ GH+ ++ + F+P G + + S DK+ ++W+ TG+
Sbjct: 321 ASADGTARVYN-ATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQC 379
Query: 395 VAVFRGHVGPVYQIRF 410
+ V GH ++ F
Sbjct: 380 LQVLEGHTDEIFSCAF 395
Score = 281 (104.0 bits), Expect = 9.4e-23, P = 9.4e-23
Identities = 81/293 (27%), Positives = 136/293 (46%)
Query: 103 TIAGHTEAVLSVAFS-PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T+ GH V ++AF+ P G ++A+GS D T +LW T GH ++C++++
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQ 188
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ +GS + WD Q+G+ L+GH I +S++ R ++ S D
Sbjct: 189 STVVATGSMDTTAKLWDIQSGEEVVT-LTGHLAEIISLSFD-----TSGDRIITGSFDHT 242
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGH 280
+WD S + V L GH ++ + D +I TGS D T +W+ T GK + L GH
Sbjct: 243 VVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGH 302
Query: 281 GHWV-NSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGNAP-ERLVS 334
+ +S T + T + D T + Y++ LE + +KI N RL++
Sbjct: 303 DDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLT 362
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
GS D T +W+ + + + GH + F+ G V + S D S ++W
Sbjct: 363 GSSDKTARIWDVQTGQCLQV-LEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 265 (98.3 bits), Expect = 9.7e-21, P = 9.7e-21
Identities = 71/259 (27%), Positives = 124/259 (47%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T GHT ++ ++F+P +A+GS DTT +LWD+ + + TGH ++ +++
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSF 227
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG--ISWEPVHLNAPCRRFVSA 216
G +++GS + WD TG+ + L GH I+ SW+ C ++
Sbjct: 228 DTSGDRIITGSFDHTVVVWDASTGRKV-HTLIGHCAEISSALFSWD-------CSLILTG 279
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLI 274
S D +WD + KCV L+GH + +C + G +I T S D T +V+ T K I
Sbjct: 280 SMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGK-LIATASADGTARVYNATTRKCI 338
Query: 275 RELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYN--------KIK 325
+L+GH ++ ++ + + L TG+ D T + + LE + K
Sbjct: 339 TKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYK 398
Query: 326 GNAPERLVSGSDDFTMFLW 344
GN +++GS D + +W
Sbjct: 399 GNI---VITGSKDNSCRIW 414
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 39/146 (26%), Positives = 68/146 (46%)
Query: 273 LIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGN 327
L + L+ H + ++AL+ + TG++D T K + + + LE + I N
Sbjct: 84 LFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 328 AP--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
P +++ +GS D T LW K T GH + + F+P VA+ S D + K
Sbjct: 144 NPYGDKIATGSFDKTCKLWSAETGKCYHT-FRGHTAEIVCLSFNPQSTVVATGSMDTTAK 202
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFE 411
LW+ +G+ V GH+ + + F+
Sbjct: 203 LWDIQSGEEVVTLTGHLAEIISLSFD 228
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 37/141 (26%), Positives = 63/141 (44%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+R+++GS D T+ +W+ + ++ T + GH ++ FS D + + S DK+ LW+
Sbjct: 232 DRIITGSFDHTVVVWDASTGRKVHT-LIGHCAEISSALFSWDCSLILTGSMDKTCMLWDA 290
Query: 390 TTGKFVAVFRGHVGPVYQIRFE----LIYCFRYP--SNFYCVVDMSCCMSL--------- 434
T+GK VA GH + F+ LI + Y C L
Sbjct: 291 TSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISK 350
Query: 435 YSWSADSRLLLSGSKDSTLKV 455
S++ LL+GS D T ++
Sbjct: 351 ISFNPQGNRLLTGSSDKTARI 371
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 277 (102.6 bits), Expect = 7.9e-24, P = 7.9e-24
Identities = 89/322 (27%), Positives = 151/322 (46%)
Query: 89 QAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-T 147
QAV R +N + GH+ V +V F P + +ASGS D ++ LW+ Q + +
Sbjct: 47 QAVPRTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQCENYGILS 106
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GHK +L + WS D K + S S L WD ++G+ + GH++ I + +
Sbjct: 107 GHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYI-GHEEVINSVE---ISKR 162
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVW 266
VSAS DG IWD ++ + L L +T V G +++G D I VW
Sbjct: 163 GQ-EMLVSASDDGTMGIWDPRQKEAIDYLETE-LPITAVAQSEAGNEVFSGGIDNAIHVW 220
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYS-SPEEMKKAALERY--- 321
+ + ++ + GH + SL +S + L + +FD T + + P + Y
Sbjct: 221 DIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGA 280
Query: 322 ------NKIKGN---APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
N I+ + A +++ +GS D ++ +W+ K ++ GH+ VN V F+P+
Sbjct: 281 PVGLEKNLIRASWNPAGDKIAAGSGDRSVVVWDFKTGKI-LYKLPGHKGTVNDVRFTPNN 339
Query: 373 Q-WVASASFDKSIKLWNGTTGK 393
+ + SAS D+++ L G GK
Sbjct: 340 EPIIVSASSDRNLML--GELGK 359
Score = 170 (64.9 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 67/304 (22%), Positives = 126/304 (41%)
Query: 124 ASGSGDTTVRLWDLNT--QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT 181
+SG T V+ + P+ + TGH V + + +H+ SGS + W+
Sbjct: 38 SSGQDGTLVQAVPRTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYG 97
Query: 182 GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTL 241
+ LSGHK I + W + + SAS D WD+ + + GH
Sbjct: 98 QCENYGILSGHKGAILDLQW-----SRDSKTIFSASADMTLASWDIESGQRIRRYIGHEE 152
Query: 242 AVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTG 298
+ V+ G ++ + S D T+ +W+ Q + I L+ + ++A S + +G
Sbjct: 153 VINSVEISKRGQEMLVSASDDGTMGIWDPRQKEAIDYLETELP-ITAVAQSEAGNEVFSG 211
Query: 299 AFDHTGKQYSSPEEM----KKAALERYNKIKGNAPER-LVSGSDDFTMFLWE--PAVSKQ 351
D+ + ++ ++ ++ + + L+S S D T+ W+ P
Sbjct: 212 GIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTN 271
Query: 352 PKTRM-----TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY 406
R G ++ + ++P G +A+ S D+S+ +W+ TGK + GH G V
Sbjct: 272 RHIRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVN 331
Query: 407 QIRF 410
+RF
Sbjct: 332 DVRF 335
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 302 (111.4 bits), Expect = 9.1e-24, P = 9.1e-24
Identities = 102/361 (28%), Positives = 168/361 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ ++AFS D RQL +GS D TVRLW+ T GH VL +A S+DG+
Sbjct: 770 LKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGR 829
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS ++ WD TG SG + +++ P R+ + KDG
Sbjct: 830 QIVSGSIEA-VKLWDAATGDLLKTLASG---FAGSVAFSP-----DSRQIAAGFKDGKIF 880
Query: 224 IWDVS--LRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGH 280
IWD + L+K L H A+ + + D + T S D TIK W+ T G ++E GH
Sbjct: 881 IWDAAGTLQKT---LERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGG-VQEAVGH 936
Query: 281 GHWVNSLALSTE-YALRTGAFDHTGKQYSSPE-EMKKAA---LERYNKIKGNAPERLVSG 335
V ++ LS + + +G+ D T K + + +++K L+ K+ + R +
Sbjct: 937 SKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVS 996
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
+ +W+ A K + + + V SPDG+ +AS + IKLW+ TG +
Sbjct: 997 CSSEAVKIWDAATGKVQNSFES--DDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLL 1054
Query: 396 AVFRGHVGPVYQIRFE-LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLK 454
G Y+ +F+ L+ + + + L +S D++L+LS S D +K
Sbjct: 1055 KTMAG-----YRSKFDSLVTTEVFDIQLQEAIFNTQITGLV-FSPDAKLILSTSTDRAIK 1108
Query: 455 V 455
+
Sbjct: 1109 L 1109
Score = 263 (97.6 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 84/296 (28%), Positives = 142/296 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ H A++S+AFSPD +QL + S D+T++ WD+ T + + GH V + S DG
Sbjct: 891 TLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDI-TIGGVQEAVGHSKHVTTMVLSPDG 949
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K + SGS ++ WD TG L+GH + E V + R+ VS S +
Sbjct: 950 KVIASGSADKTIKLWDAATGDLQ-KTLTGHLDTV-----EKVVFSLDNRQIVSCSSEA-V 1002
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
+IWD + K + T V DG I +G + IK+W+ G L++ + G+
Sbjct: 1003 KIWDAATGKVQNSFESDDV-FTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAGYR 1061
Query: 282 HWVNSLALSTEY--ALRTGAFDH--TGKQYSSPEEM-----KKAALERYNKIKGNAPERL 332
+SL + + L+ F+ TG +S ++ A++ ++ G+ +RL
Sbjct: 1062 SKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQKRL 1121
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
SD ++ +R +G+ + V FS DGQ +A+AS DK+I++W+
Sbjct: 1122 PCHSD---------SIITDAFSRSSGYPNWIFSVAFSSDGQHIAAASADKTIRVWS 1168
Score = 260 (96.6 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 104/380 (27%), Positives = 165/380 (43%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T GHT VLSVA S DGRQ+ SGS + V+LWD T + K T + +A+S D
Sbjct: 811 TFVGHTGTVLSVAISSDGRQIVSGSIEA-VKLWDAATGD-LLK-TLASGFAGSVAFSPDS 867
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ + +G K G++ WD G L H I I++ P ++ V+ S D
Sbjct: 868 RQIAAGFKDGKIFIWDA-AGTLQ-KTLERHPGAIMSIAFSP-----DVKQLVTCSTDSTI 920
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
+ WD+++ + GH+ VT + DG VI +GS D TIK+W+ G L + L GH
Sbjct: 921 KRWDITIGGVQEAV-GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHL 979
Query: 282 HWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYN--KIKGNAPE--RLVSGSD 337
V + S + K + + + + E + I +P+ + SG
Sbjct: 980 DTVEKVVFSLDNRQIVSCSSEAVKIWDAATGKVQNSFESDDVFTIVAVSPDGKHIASGHC 1039
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQ--------------QLVNHVY--------FSPDGQWV 375
+ + LW+ A KT M G++ QL ++ FSPD + +
Sbjct: 1040 NGRIKLWDMATGSLLKT-MAGYRSKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLI 1098
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLY 435
S S D++IKLW+ TG H + F YP+ + V
Sbjct: 1099 LSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSR--SSGYPNWIFSV---------- 1146
Query: 436 SWSADSRLLLSGSKDSTLKV 455
++S+D + + + S D T++V
Sbjct: 1147 AFSSDGQHIAAASADKTIRV 1166
Score = 209 (78.6 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 83/289 (28%), Positives = 138/289 (47%)
Query: 115 AFSPDGRQLAS-G-SGDTT-VRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKA 171
AFS D +Q+A+ G S D+T + L+D T GH + +A+S+D + LV+GS
Sbjct: 736 AFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVD 795
Query: 172 GELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK 231
++ W+ TG GH + ++ +++ R+ VS S + ++WD +
Sbjct: 796 CTVRLWNTTTGDLE-KTFVGHTGTVLSVA-----ISSDGRQIVSGSIEA-VKLWDAATGD 848
Query: 232 CVICL-SGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
+ L SG +V + D I G +D I +W+ G L + L+ H + S+A
Sbjct: 849 LLKTLASGFAGSVA---FSPDSRQIAAGFKDGKIFIWDAA-GTLQKTLERHPGAIMSIAF 904
Query: 290 STEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN--APERLV--SGSDDFTMFLW 344
S + L T + D T K++ + A+ + +P+ V SGS D T+ LW
Sbjct: 905 SPDVKQLVTCSTDSTIKRWDITIGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLW 964
Query: 345 EPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
+ A KT +TGH V V FS D + + S S +++K+W+ TGK
Sbjct: 965 DAATGDLQKT-LTGHLDTVEKVVFSLDNRQIVSCS-SEAVKIWDAATGK 1011
Score = 149 (57.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 35/89 (39%), Positives = 49/89 (55%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG-H--------KNWV 153
T+ GH+EAV VAFSPDG+Q+ASGS ++LWD T + +G H + V
Sbjct: 615 TLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQV 674
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTG 182
+A+ D K ++SG G + WD TG
Sbjct: 675 KAMAFLPDSKLIISGYYDGSVMLWDTTTG 703
Score = 124 (48.7 bits), Expect = 0.00053, P = 0.00053
Identities = 41/127 (32%), Positives = 60/127 (47%)
Query: 113 SVAFSPDGRQLASGSGDTTVRLW-----DL-NTQTPMFKC-TGHKNWVLCIAWSADGKHL 165
++ FSP+ + G V +W + ++ TPM + TGH V +A+S DGK +
Sbjct: 577 AIIFSPES-SVVKGENLHKVPVWLGRAPPMEDSWTPMIQTLTGHSEAVWRVAFSPDGKQI 635
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSG-HKKWITGISWEPVHLNA--P-CRRFVSASKDGD 221
SGS +G ++ WD TG LSG H K I E V A P + +S DG
Sbjct: 636 ASGSDSGLIKLWDTTTGSLQ-KTLSGSHPKRRYQIQQEQVKAMAFLPDSKLIISGYYDGS 694
Query: 222 ARIWDVS 228
+WD +
Sbjct: 695 VMLWDTT 701
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 288 (106.4 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 83/293 (28%), Positives = 136/293 (46%)
Query: 103 TIAGHTEAVLSVAFS-PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T+ GH V ++AF+ P G ++A+GS D T +LW + T GH ++C++++
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ 188
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ +GS + WD Q G+ L GH I +S+ N R ++ S D
Sbjct: 189 STLVATGSMDTTAKLWDIQNGEEVYT-LRGHSAEIISLSF-----NTSGDRIITGSFDHT 242
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGH 280
+WD + V L GH ++ + D +I TGS D T K+W+ T GK + L GH
Sbjct: 243 VVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGH 302
Query: 281 GHWV-NSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGNAP-ERLVS 334
+ +S T + T + D T + +S+ A LE + +KI N L++
Sbjct: 303 DDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLT 362
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
GS D T +W+ A + Q + GH + F+ G V + S D + ++W
Sbjct: 363 GSSDKTARIWD-AQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 288 (106.4 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 82/316 (25%), Positives = 153/316 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD-G 162
+ H + +VA + G +GS D T +LWD + + GH+N V IA++ G
Sbjct: 88 LKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYG 147
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +GS + W +TGK + GH I +S+ P + S D A
Sbjct: 148 DKIATGSFDKTCKLWSVETGK-CYHTFRGHTAEIVCLSFNP-----QSTLVATGSMDTTA 201
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + V L GH+ + + + GD +I TGS D T+ VW+ G+ + L GH
Sbjct: 202 KLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRII-TGSFDHTVVVWDADTGRKVNILIGH 260
Query: 281 GHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALERYN-KIKGNAPE---RLVS- 334
++S + + + +L TG+ D T K + + A L ++ +I + + +L++
Sbjct: 261 CAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIAT 320
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
S D T ++ A +++ ++ GH+ ++ + F+P G + + S DK+ ++W+ TG+
Sbjct: 321 ASADGTARIFS-AATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQC 379
Query: 395 VAVFRGHVGPVYQIRF 410
+ V GH ++ F
Sbjct: 380 LQVLEGHTDEIFSCAF 395
Score = 273 (101.2 bits), Expect = 9.7e-22, P = 9.7e-22
Identities = 70/257 (27%), Positives = 125/257 (48%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T GHT ++ ++F+P +A+GS DTT +LWD+ ++ GH ++ +++
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSF 227
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
+ G +++GS + WD TG+ N L GH I+ S+ N C ++ S
Sbjct: 228 NTSGDRIITGSFDHTVVVWDADTGRKV-NILIGHCAEISSASF-----NWDCSLILTGSM 281
Query: 219 DGDARIWDVSLRKCVICLSGHTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRE 276
D ++WD + KCV L+GH + +C + G +I T S D T +++ K I +
Sbjct: 282 DKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGK-LIATASADGTARIFSAATRKCIAK 340
Query: 277 LKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYN--------KIKGN 327
L+GH ++ ++ + + L TG+ D T + + + LE + KGN
Sbjct: 341 LEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGN 400
Query: 328 APERLVSGSDDFTMFLW 344
+++GS D T +W
Sbjct: 401 I---VITGSKDNTCRIW 414
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 288 (106.4 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 80/248 (32%), Positives = 121/248 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V +A P + +GS D T+++WDL + TGH + V + SA
Sbjct: 202 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSP 261
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + G+ P ++ V+ S+D AR
Sbjct: 262 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYGLDLHPT-IDV----LVTCSRDSTAR 315
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IWDV + V LSGHT AV VK + + TGS D TI++W+ GK L H
Sbjct: 316 IWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKK 375
Query: 283 WVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V ++ L Y +G+ D+ KQ+ P+ L +N I N+ LVSG+D
Sbjct: 376 SVRAVILHPRHYTFASGSPDNI-KQWKFPDGNFIQNLSGHNAIINTLTVNSDGVLVSGAD 434
Query: 338 DFTMFLWE 345
+ TM LW+
Sbjct: 435 NGTMHLWD 442
Score = 192 (72.6 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 64/220 (29%), Positives = 101/220 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 202 ISGHLGWVRCIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 256
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 257 SARSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 316
Query: 307 YSSPEEMKKAALERYNK----IKGNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + +K A E ++V+GS D T+ LW+ V+ + + +T H++
Sbjct: 317 WDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWD-LVAGKTRVTLTNHKK 375
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V V P AS S D +IK W G F+ GH
Sbjct: 376 SVRAVILHPRHYTFASGSPD-NIKQWKFPDGNFIQNLSGH 414
Score = 185 (70.2 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 55/209 (26%), Positives = 91/209 (43%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV + P L + S D+T R+WD+ T+ + +GH N V + A +
Sbjct: 288 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQV 347
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
V+GS ++ WD GK L+ HKK + + P H F S S D + + W
Sbjct: 348 VTGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVILHPRHYT-----FASGSPD-NIKQW 400
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ LSGH + + DGV+ +G+ + T+ +W+ G + + H V
Sbjct: 401 KFPDGNFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRV--HAA-VQ 457
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMK 314
+L +E + FD + + + E K
Sbjct: 458 PGSLDSESGIFACVFDQSESRLLTAEADK 486
Score = 177 (67.4 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 63/253 (24%), Positives = 111/253 (43%)
Query: 147 TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
+GH WV CIA + V+GS ++ WD +GK + L+GH + G+ V
Sbjct: 203 SGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLS-LTGHISTVRGVI---VSA 258
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKV 265
+P S +D + WD+ K + GH AV + V+ T S+D T ++
Sbjct: 259 RSPY--LFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 316
Query: 266 WETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK- 323
W+ + L GH + V ++ + E + TG+ D T + + + L + K
Sbjct: 317 WDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKS 376
Query: 324 IKGNA--PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
++ P SGS D + W+ + ++GH ++N + + DG V+ A
Sbjct: 377 VRAVILHPRHYTFASGSPD-NIKQWKFPDGNFIQN-LSGHNAIINTLTVNSDGVLVSGAD 434
Query: 380 FDKSIKLWNGTTG 392
+ ++ LW+ TG
Sbjct: 435 -NGTMHLWDWRTG 446
Score = 169 (64.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 56/202 (27%), Positives = 89/202 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V V S L S D V+ WDL + GH + V +
Sbjct: 243 SLTGHISTVRGVIVSARSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 302
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K S + LSGH + + + P + V+ S D
Sbjct: 303 DVLVTCSRDSTARIWDVRT-KASVHTLSGHTNAVATVKCQAAE---P--QVVTGSHDTTI 356
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K + L+ H +V V + +GS D IK W+ G I+ L GH
Sbjct: 357 RLWDLVAGKTRVTLTNHKKSVRAVILHPRHYTFASGSPD-NIKQWKFPDGNFIQNLSGHN 415
Query: 282 HWVNSLALSTEYALRTGAFDHT 303
+N+L ++++ L +GA + T
Sbjct: 416 AIINTLTVNSDGVLVSGADNGT 437
Score = 122 (48.0 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 39/124 (31%), Positives = 55/124 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GHT AV +V Q+ +GS DTT+RLWDL T HK V +
Sbjct: 327 TLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHPRH 386
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
SGS ++ W G N LSGH I ++ +N+ VS + +G
Sbjct: 387 YTFASGSP-DNIKQWKFPDGNFIQN-LSGHNAIINTLT-----VNSD-GVLVSGADNGTM 438
Query: 223 RIWD 226
+WD
Sbjct: 439 HLWD 442
Score = 41 (19.5 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVY 86
V+ L+ K + +++D+ VPL E HKV + L Y
Sbjct: 10 VHTLVFRSLKRTHDMFVADNAKPVPLDD--ESHKVKMAVKLRTEY 52
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 283 (104.7 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 84/307 (27%), Positives = 139/307 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +AV V FS + +QLASGS D+ + +W + Q+ ++ TGHK+ V C+ +S G L
Sbjct: 17 GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
SGS+ ++ W P K H + VH + + FV+AS D ++W
Sbjct: 77 ASGSRDKTVRIWVPNV-KGESTVFRAHTATVRS-----VHFCSDGQSFVTASDDKTVKVW 130
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
+K + LS H V C K+ DG +I + S D T+K+W+ + + + HG +V
Sbjct: 131 ATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFV 190
Query: 285 NSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNK-IKGNA--PER--LVSGSDD 338
+ + D+T K + + ++ + G + P L++ S D
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSD 250
Query: 339 FTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVF 398
T+ + + + T + GHQ V FS G++ AS D+ + +W F V
Sbjct: 251 STLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN---FDIVD 306
Query: 399 RGHVGPV 405
G V V
Sbjct: 307 HGEVTKV 313
Score = 233 (87.1 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 58/205 (28%), Positives = 98/205 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ + S D TV++W + Q +F + H NWV C +S
Sbjct: 96 STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSP 155
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD ++ + + H ++T + + P + C +A D
Sbjct: 156 DGRLIVSASDDKTVKLWD-KSSRECVHSYCEHGGFVTYVDFHP---SGTC--IAAAGMDN 209
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WDV + + H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 269
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H ++A S RTG + +G
Sbjct: 270 HQGPATTVAFS-----RTGEYFASG 289
Score = 229 (85.7 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 77/274 (28%), Positives = 119/274 (43%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP--LSGHKKWITGISWEPV- 204
GH++ V C+ +S + K L SGS L W KP +GHK +T +++ P
Sbjct: 17 GHRDAVTCVDFSINTKQLASGSMDSCLMVWHM---KPQSRAYRFTGHKDAVTCVNFSPSG 73
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
HL A S S+D RIW +++ HT V V + DG + T S D T+
Sbjct: 74 HLLA------SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTV 127
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDH-TGKQYS-SPEEMKKAALER- 320
KVW T + K + L H +WV S + L A D T K + S E + E
Sbjct: 128 KVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHG 187
Query: 321 ----YNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVA 376
Y + +G D+ T+ +W+ + + H VN + F P G ++
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDN-TVKVWDVRTHRLLQHYQL-HSAAVNGLSFHPSGNYLI 245
Query: 377 SASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+AS D ++K+ + G+ + GH GP + F
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF 279
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 43/142 (30%), Positives = 63/142 (44%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
++L SGS D + +W + Q + R TGH+ V V FSP G +AS S DK++++W
Sbjct: 32 KQLASGSMDSCLMVWH--MKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWV 89
Query: 389 GTTGKFVAVFRGHVGPVYQIRF-ELIYCFRYPSN-----FYCVVDMSCCMSL---YSW-- 437
VFR H V + F F S+ + SL +W
Sbjct: 90 PNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVR 149
Query: 438 ----SADSRLLLSGSKDSTLKV 455
S D RL++S S D T+K+
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKL 171
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 284 (105.0 bits), Expect = 4.3e-23, P = 4.3e-23
Identities = 84/293 (28%), Positives = 129/293 (44%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH + SV F P + S S D T+++WD + GH N V I + G
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN 161
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD QT L GH ++ + + P + +S+S+D +
Sbjct: 162 LLASCSADLTIKLWDFQT-YDCVKTLHGHDHNVSCVRFTPSG-----DQLISSSRDKTIK 215
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+ + C+ L GH V + DG I + S D TIK W +G+ + + H H
Sbjct: 216 VWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSH 275
Query: 283 WVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMF 342
V LA ST D G S+PE K + G L +GS D T+
Sbjct: 276 VVECLAFST-----ANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGY-LATGSRDKTIK 329
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
+WE A + T + GH V V F P G+++ S DK+I++W+ G+ +
Sbjct: 330 IWELATGRCLATYI-GHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCI 381
Score = 230 (86.0 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 78/290 (26%), Positives = 127/290 (43%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT AV + F G LAS S D T++LWD T + GH + V C+ ++ G
Sbjct: 143 TLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSG 202
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L+S S+ ++ W+ TG L GH+ W+ I+ V + C S S D
Sbjct: 203 DQLISSSRDKTIKVWEAATGYCI-KTLVGHEDWVRKIT---VSEDGSC--IASCSNDQTI 256
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+ W++ +C+ H+ V C+ + +I D + T +GK + +G G
Sbjct: 257 KTWNIVKGECLATYREHSHVVECLAFSTANII-----DIPGSLLSTPEGKS-KVKQGPG- 309
Query: 283 WVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAA-LERYNKIKGNA--P--ERLVSGSD 337
+L Y L TG+ D T K + A + N ++ P + L+S D
Sbjct: 310 --GNLVGQCGY-LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGD 366
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
D T+ +W+ A + KT H ++ + F +A+ D IK+W
Sbjct: 367 DKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 225 (84.3 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 74/268 (27%), Positives = 127/268 (47%)
Query: 147 TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-H 205
TGH+N + + + +VS S+ ++ WD ++G+ L GH + I ++ +
Sbjct: 103 TGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFE-RTLKGHTNAVQDIDFDKTGN 161
Query: 206 LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDCTI 263
L A C S D ++WD CV L GH V+CV++ GD +I + S+D TI
Sbjct: 162 LLASC------SADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLI-SSSRDKTI 214
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYN 322
KVWE G I+ L GH WV + +S + + + + + D T K ++ +K L Y
Sbjct: 215 KVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNI---VKGECLATYR 271
Query: 323 KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ + E L + + + + K+++ +Q G ++A+ S DK
Sbjct: 272 E-HSHVVECLAFSTANIIDIPGSLLSTPEGKSKV---KQGPGGNLVGQCG-YLATGSRDK 326
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+IK+W TG+ +A + GH V +RF
Sbjct: 327 TIKIWELATGRCLATYIGHDNWVRAVRF 354
Score = 193 (73.0 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 63/230 (27%), Positives = 106/230 (46%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
L+GH + VK+ ++ + S+D TIKVW+ G+ R LKGH + V + T
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN 161
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IKGN-APERLVSGSDDFTMFLWEPAV 348
L + + D T K + + + +K +N ++ + ++L+S S D T+ +WE A
Sbjct: 162 LLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAAT 221
Query: 349 SKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
KT + GH+ V + S DG +AS S D++IK WN G+ +A +R H V +
Sbjct: 222 GYCIKT-LVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECL 280
Query: 409 RFELIYCFRYPSNFYCVVDMSCCMSLYSWS---ADSRLLLSGSKDSTLKV 455
F P + + + L +GS+D T+K+
Sbjct: 281 AFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKI 330
Score = 134 (52.2 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V V F+P G QL S S D T+++W+ T + GH++WV I S
Sbjct: 182 CVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVS 241
Query: 160 ADGKHLVSGSKAGELQCWDPQTGK 183
DG + S S ++ W+ G+
Sbjct: 242 EDGSCIASCSNDQTIKTWNIVKGE 265
Score = 125 (49.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 30/107 (28%), Positives = 56/107 (52%)
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGDA 222
+L +GS+ ++ W+ TG+ + GH W+ + + H PC +F+ S D
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYI-GHDNWVRAVRF---H---PCGKFLLSVGDDKTI 370
Query: 223 RIWDVSLRKCVICLS-GHTLAVTCVKWG-GDGVIYTGSQDCTIKVWE 267
R+WD++ +C+ ++ HT ++C+ + + I TG D IKVW+
Sbjct: 371 RVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWK 417
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 31/103 (30%), Positives = 50/103 (48%)
Query: 184 PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV 243
P + L+GH+ I + + P VSAS+D ++WD + L GHT AV
Sbjct: 97 PEKHILTGHRNCINSVKFHPSF-----SLMVSASEDATIKVWDFESGEFERTLKGHTNAV 151
Query: 244 TCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ + G ++ + S D TIK+W+ ++ L GH H V+
Sbjct: 152 QDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVS 194
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 345 EPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
E A+ + P+ +TGH+ +N V F P + SAS D +IK+W+ +G+F +GH
Sbjct: 90 EDALPRPPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTN 149
Query: 404 PVYQIRFE 411
V I F+
Sbjct: 150 AVQDIDFD 157
Score = 90 (36.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH + V + S DG +AS S D T++ W++ + H + V C+A+S
Sbjct: 224 CIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFS 283
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 282 (104.3 bits), Expect = 4.7e-23, P = 4.7e-23
Identities = 80/292 (27%), Positives = 135/292 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +AV V FS + + LASGS D+T+ +W + Q+ ++ TGHK+ V C+ +S G L
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
SGS+ ++ W P K H + VH + + V+AS D ++W
Sbjct: 77 ASGSRDKTVRIWVPNV-KGESTVFRAHTATVRS-----VHFCSDGQSLVTASDDKTVKVW 130
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
++ + L+ H V C K+ DG +I + S D T+K+W+ T + I HG +V
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFV 190
Query: 285 NSLALSTE-YALRTGAFDHTGKQYSSPE-------EMKKAALERYN-KIKGNAPERLVSG 335
+ + D+T K + + ++ AA+ + GN L++
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNY---LITA 247
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GHQ V FS G++ AS D+ + +W
Sbjct: 248 SSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 251 (93.4 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 69/241 (28%), Positives = 112/241 (46%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ L + S D TV++W + Q +F T H NWV C +S
Sbjct: 96 STVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSP 155
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD +T + + H ++T + + P + C +A D
Sbjct: 156 DGRLIVSASDDKTVKLWD-KTSRECIHSYCEHGGFVTYVDFHP---SGTC--IAAAGMDN 209
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WD + + H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 210 TVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 269
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMK--KAALE--RYNKIKGNAPERLVSG 335
H ++A S RTG + +G S E++ K+ + Y +K P L S
Sbjct: 270 HQGPATTVAFS-----RTGEYFASG---GSDEQVMVWKSNFDIVDYGDMKARRPPPLTSS 321
Query: 336 S 336
S
Sbjct: 322 S 322
Score = 234 (87.4 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 74/275 (26%), Positives = 119/275 (43%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP--LSGHKKWITGISWEPV- 204
GH++ V C+ +S + KHL SGS L W KP +GHK +T +++ P
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHM---KPQSRAYRFTGHKDAVTCVNFSPSG 73
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTI 263
HL A S S+D RIW +++ HT V V + DG + T S D T+
Sbjct: 74 HLLA------SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTV 127
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNK 323
KVW T + + + L H +WV S + L A D K ++ + + Y +
Sbjct: 128 KVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDD--KTVKLWDKTSRECIHSYCE 185
Query: 324 IKGNA------PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
G P + + D T+ +W+ + + H VN + F P G ++
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQL-HSAAVNALSFHPSGNYL 244
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+AS D ++K+ + G+ + GH GP + F
Sbjct: 245 ITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF 279
Score = 152 (58.6 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 55/215 (25%), Positives = 94/215 (43%)
Query: 238 GHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YAL 295
GH AVTCV + + +GS D T+ +W GH V + S + L
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 296 RTGAFDHTGKQYSSPEEMKKAALERYNK-IKG----NAPERLVSGSDDFTMFLWEPAVSK 350
+G+ D T + + + + + ++ + + LV+ SDD T+ +W +
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTH-RQ 135
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ +T H V FSPDG+ + SAS DK++KLW+ T+ + + + H G V + F
Sbjct: 136 RFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDF 195
Query: 411 ELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+PS C+ ++ W A + LL
Sbjct: 196 -------HPSGT-CIAAAGMDNTVKVWDARTHRLL 222
Score = 129 (50.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 43/142 (30%), Positives = 63/142 (44%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+ L SGS D T+ +W + Q + R TGH+ V V FSP G +AS S DK++++W
Sbjct: 32 KHLASGSMDSTLMIWH--MKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWV 89
Query: 389 GTTGKFVAVFRGHVGPVYQIRF-----ELIYCFRYPS-NFYCVVDMSCCMSL---YSW-- 437
VFR H V + F L+ + + SL +W
Sbjct: 90 PNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVR 149
Query: 438 ----SADSRLLLSGSKDSTLKV 455
S D RL++S S D T+K+
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKL 171
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 267 (99.0 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 90/320 (28%), Positives = 154/320 (48%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW++
Sbjct: 42 PGALLQAGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC 100
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 157
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K I +T V V + D +I +G
Sbjct: 158 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQII-SGG 213
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 313 -MK--KAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+K + + + K ++ + +P+ ++ +GS D +++W+ S++ ++ GH +N
Sbjct: 274 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRILYKLPGHAGSIN 332
Query: 365 HVYFSPDGQWVASASFDKSI 384
V F PD + SAS DK +
Sbjct: 333 EVAFHPDEPIILSASSDKRL 352
Score = 188 (71.2 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 71/273 (26%), Positives = 125/273 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC--VICLSGHTLAVTCV 246
LSGH+ + + P N SA D +W+V C L GH+ AV +
Sbjct: 63 LSGHEGEVYCCKFHP---NGST--LASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMEL 116
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHT 303
+ DG ++++ S D T+ VW++ G+ ++ LKGH +VNS A + TG+ D T
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 304 GKQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
K + + KKAA++ + N + + ++++SG D + +W+ +K T M
Sbjct: 177 VKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-M 232
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGPVYQIRFEL 412
GH V + S +G ++ S + D ++++W+ + V +F+G+V + L
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV---HNFEKNL 289
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ C P S +Y W SR +L
Sbjct: 290 LRCSWSPDGSKIAAG-SADRFVYVWDTTSRRIL 321
Score = 178 (67.7 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 66/286 (23%), Positives = 127/286 (44%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ +GH+ V C + +G L S + W+ + L GH +G
Sbjct: 57 QAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGH----SGA 112
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV-TCVKWG-GDGVIYTG 257
E +H N SAS D +WD + V L GHT V +C G ++ TG
Sbjct: 113 VME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 171
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
S D T+K+W+ + I+ + + + V ++ + T + +G D+ K + +
Sbjct: 172 SDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 230
Query: 317 ALERY-NKIKG----NAPERLVSGSDDFTMFLWE--PAVSKQPKTRM-TGH----QQLVN 364
+ + + + G + L+S + D T+ +W+ P K+ ++ G+ ++ +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+SPDG +A+ S D+ + +W+ T+ + + GH G + ++ F
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAF 336
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 267 (99.0 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 90/320 (28%), Positives = 154/320 (48%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW++
Sbjct: 41 PGALLQAGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC 99
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 100 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 156
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K I +T V V + D +I +G
Sbjct: 157 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQII-SGG 212
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 213 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 272
Query: 313 -MK--KAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+K + + + K ++ + +P+ ++ +GS D +++W+ S++ ++ GH +N
Sbjct: 273 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRILYKLPGHAGSIN 331
Query: 365 HVYFSPDGQWVASASFDKSI 384
V F PD + SAS DK +
Sbjct: 332 EVAFHPDEPIIISASSDKRL 351
Score = 188 (71.2 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 71/273 (26%), Positives = 125/273 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC--VICLSGHTLAVTCV 246
LSGH+ + + P N SA D +W+V C L GH+ AV +
Sbjct: 62 LSGHEGEVYCCKFHP---NGST--LASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMEL 115
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHT 303
+ DG ++++ S D T+ VW++ G+ ++ LKGH +VNS A + TG+ D T
Sbjct: 116 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 175
Query: 304 GKQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
K + + KKAA++ + N + + ++++SG D + +W+ +K T M
Sbjct: 176 VKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-M 231
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGPVYQIRFEL 412
GH V + S +G ++ S + D ++++W+ + V +F+G+V + L
Sbjct: 232 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV---HNFEKNL 288
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ C P S +Y W SR +L
Sbjct: 289 LRCSWSPDGSKIAAG-SADRFVYVWDTTSRRIL 320
Score = 178 (67.7 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 66/286 (23%), Positives = 127/286 (44%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ +GH+ V C + +G L S + W+ + L GH +G
Sbjct: 56 QAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGH----SGA 111
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV-TCVKWG-GDGVIYTG 257
E +H N SAS D +WD + V L GHT V +C G ++ TG
Sbjct: 112 VME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 170
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
S D T+K+W+ + I+ + + + V ++ + T + +G D+ K + +
Sbjct: 171 SDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 229
Query: 317 ALERY-NKIKG----NAPERLVSGSDDFTMFLWE--PAVSKQPKTRM-TGH----QQLVN 364
+ + + + G + L+S + D T+ +W+ P K+ ++ G+ ++ +
Sbjct: 230 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 289
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+SPDG +A+ S D+ + +W+ T+ + + GH G + ++ F
Sbjct: 290 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAF 335
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 267 (99.0 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 90/320 (28%), Positives = 154/320 (48%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW++
Sbjct: 42 PGALLQAGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC 100
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 157
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K I +T V V + D +I +G
Sbjct: 158 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQII-SGG 213
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 313 -MK--KAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+K + + + K ++ + +P+ ++ +GS D +++W+ S++ ++ GH +N
Sbjct: 274 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRILYKLPGHAGSIN 332
Query: 365 HVYFSPDGQWVASASFDKSI 384
V F PD + SAS DK +
Sbjct: 333 EVAFHPDEPIILSASSDKRL 352
Score = 188 (71.2 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 71/273 (26%), Positives = 125/273 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC--VICLSGHTLAVTCV 246
LSGH+ + + P N SA D +W+V C L GH+ AV +
Sbjct: 63 LSGHEGEVYCCKFHP---NGST--LASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMEL 116
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHT 303
+ DG ++++ S D T+ VW++ G+ ++ LKGH +VNS A + TG+ D T
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 304 GKQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
K + + KKAA++ + N + + ++++SG D + +W+ +K T M
Sbjct: 177 VKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-M 232
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGPVYQIRFEL 412
GH V + S +G ++ S + D ++++W+ + V +F+G+V + L
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV---HNFEKNL 289
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ C P S +Y W SR +L
Sbjct: 290 LRCSWSPDGSKIAAG-SADRFVYVWDTTSRRIL 321
Score = 178 (67.7 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 66/286 (23%), Positives = 127/286 (44%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ +GH+ V C + +G L S + W+ + L GH +G
Sbjct: 57 QAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGH----SGA 112
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV-TCVKWG-GDGVIYTG 257
E +H N SAS D +WD + V L GHT V +C G ++ TG
Sbjct: 113 VME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 171
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
S D T+K+W+ + I+ + + + V ++ + T + +G D+ K + +
Sbjct: 172 SDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 230
Query: 317 ALERY-NKIKG----NAPERLVSGSDDFTMFLWE--PAVSKQPKTRM-TGH----QQLVN 364
+ + + + G + L+S + D T+ +W+ P K+ ++ G+ ++ +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+SPDG +A+ S D+ + +W+ T+ + + GH G + ++ F
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAF 336
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 267 (99.0 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 89/320 (27%), Positives = 154/320 (48%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW++
Sbjct: 42 PGALLQAGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC 100
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 157
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K + +T V V + D +I +G
Sbjct: 158 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAVQTFQNTYQVLAVTFNDTSDQII-SGG 213
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 313 -MK--KAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+K + + + K ++ + +P+ ++ +GS D +++W+ S++ ++ GH +N
Sbjct: 274 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRVLYKLPGHAGSIN 332
Query: 365 HVYFSPDGQWVASASFDKSI 384
V F PD + SAS DK +
Sbjct: 333 EVAFHPDEPIILSASSDKRL 352
Score = 186 (70.5 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 71/273 (26%), Positives = 125/273 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC--VICLSGHTLAVTCV 246
LSGH+ + + P N SA D +W+V C L GH+ AV +
Sbjct: 63 LSGHEGEVYCCKFHP---NGST--LASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMEL 116
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHT 303
+ DG ++++ S D T+ VW++ G+ ++ LKGH +VNS A + TG+ D T
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 304 GKQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
K + + KKAA++ + N + + ++++SG D + +W+ +K T M
Sbjct: 177 VKLW---DIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-M 232
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGPVYQIRFEL 412
GH V + S +G ++ S + D ++++W+ + V +F+G+V + L
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV---HNFEKNL 289
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ C P S +Y W SR +L
Sbjct: 290 LRCSWSPDGSKIAAG-SADRFVYVWDTTSRRVL 321
Score = 176 (67.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 65/286 (22%), Positives = 127/286 (44%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ +GH+ V C + +G L S + W+ + L GH +G
Sbjct: 57 QAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGH----SGA 112
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV-TCVKWG-GDGVIYTG 257
E +H N SAS D +WD + V L GHT V +C G ++ TG
Sbjct: 113 VME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 171
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
S D T+K+W+ + ++ + + + V ++ + T + +G D+ K + +
Sbjct: 172 SDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 230
Query: 317 ALERY-NKIKG----NAPERLVSGSDDFTMFLWE--PAVSKQPKTRM-TGH----QQLVN 364
+ + + + G + L+S + D T+ +W+ P K+ ++ G+ ++ +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+SPDG +A+ S D+ + +W+ T+ + + GH G + ++ F
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAF 336
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 280 (103.6 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 84/294 (28%), Positives = 141/294 (47%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +A+ S+ FSP G+Q+ASGS D +V +W++ Q+ ++ TGHK+ V C+ +S L
Sbjct: 16 GHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLL 75
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
S S+ ++ W P K H TG S V +A + ++AS D ++W
Sbjct: 76 ASSSRDKTVRLWVPSV-KGESVLFRAH----TG-SVRSVCFSADGQSLLTASDDQSIKLW 129
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIR---ELKGHG 281
V +K + L H V C ++ DG + S D T+K+W+ + +LI E G+
Sbjct: 130 SVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYS 189
Query: 282 HWVNSLALSTEYALRTGAFDHTGKQYS-------SPEEMKKAALERYN-KIKGNAPERLV 333
+V+ ST + T + D+T + + ++ AA+ + GN L+
Sbjct: 190 SYVDFHPSST--CIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGN---HLL 244
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
+ S D T+ + + + T + GHQ + V FS G ASA D+ + +W
Sbjct: 245 TASSDSTLKILDLLEGRLLYT-LHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
Score = 222 (83.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 71/273 (26%), Positives = 120/273 (43%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP--LSGHKKWITGISWEP-V 204
GH++ + + +S GK + SGS + W+ KP +GHK +T + + P
Sbjct: 16 GHRDAITSLDFSPSGKQIASGSVDASVMVWNM---KPQSRAYRFTGHKDAVTCVQFSPSA 72
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTI 263
HL A S+S+D R+W S++ + HT +V V + DG + T S D +I
Sbjct: 73 HLLA------SSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSI 126
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFD-HTGKQY-SSPEEMKKAALER- 320
K+W + K+I L+ H +WV S + L D T K + +S ++ E
Sbjct: 127 KLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPG 186
Query: 321 -YNKIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVAS 377
Y+ P + + S D T+ +W+ + H VN + F P G + +
Sbjct: 187 GYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQV-HSAAVNALSFHPSGNHLLT 245
Query: 378 ASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
AS D ++K+ + G+ + GH G + F
Sbjct: 246 ASSDSTLKILDLLEGRLLYTLHGHQGSASCVSF 278
Score = 216 (81.1 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 56/183 (30%), Positives = 87/183 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT +V SV FS DG+ L + S D +++LW ++ Q + H NWV C +S
Sbjct: 95 SVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSP 154
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG--ISWEPVHLNAPCRRFVSASK 218
DG+ +VS S ++ WD S L H G S+ H ++ C +AS
Sbjct: 155 DGQLMVSVSDDRTVKLWDA-----SSRQLI-HTFCEPGGYSSYVDFHPSSTC--IATASS 206
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIREL 277
D R+WD+ + H+ AV + + G + T S D T+K+ + +G+L+ L
Sbjct: 207 DNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTL 266
Query: 278 KGH 280
GH
Sbjct: 267 HGH 269
Score = 126 (49.4 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 38/114 (33%), Positives = 53/114 (46%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S S D T+ LW P+V K H V V FS DGQ + +AS D+SIKLW+
Sbjct: 75 LASSSRDKTVRLWVPSV-KGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHR 133
Query: 392 GKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
K + R H + C R+ + +V +S ++ W A SR L+
Sbjct: 134 QKIICTLREHNN--------WVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLI 179
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 266 (98.7 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 89/320 (27%), Positives = 153/320 (47%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW++
Sbjct: 42 PGALLQAGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC 100
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 157
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K I +T V V + D +I +G
Sbjct: 158 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQII-SGG 213
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 313 ---MKKAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+ + + + K ++ + +P+ ++ +GS D +++W+ S++ ++ GH +N
Sbjct: 274 CVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRILYKLPGHAGSIN 332
Query: 365 HVYFSPDGQWVASASFDKSI 384
V F PD + SAS DK +
Sbjct: 333 EVAFHPDEPIILSASSDKRL 352
Score = 188 (71.2 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 71/273 (26%), Positives = 125/273 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC--VICLSGHTLAVTCV 246
LSGH+ + + P N SA D +W+V C L GH+ AV +
Sbjct: 63 LSGHEGEVYCCKFHP---NGST--LASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMEL 116
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHT 303
+ DG ++++ S D T+ VW++ G+ ++ LKGH +VNS A + TG+ D T
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 304 GKQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
K + + KKAA++ + N + + ++++SG D + +W+ +K T M
Sbjct: 177 VKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-M 232
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGPVYQIRFEL 412
GH V + S +G ++ S + D ++++W+ + V +F+G+V + L
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNV---HNFEKNL 289
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ C P S +Y W SR +L
Sbjct: 290 LRCSWSPDGSKIAAG-SADRFVYVWDTTSRRIL 321
Score = 181 (68.8 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 67/286 (23%), Positives = 127/286 (44%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ +GH+ V C + +G L S + W+ + L GH +G
Sbjct: 57 QAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGH----SGA 112
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV-TCVKWG-GDGVIYTG 257
E +H N SAS D +WD + V L GHT V +C G ++ TG
Sbjct: 113 VME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 171
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
S D T+K+W+ + I+ + + + V ++ + T + +G D+ K + +
Sbjct: 172 SDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 230
Query: 317 ALERY-NKIKG----NAPERLVSGSDDFTMFLWE--PAVSKQPKTRM-TGH----QQLVN 364
+ + + + G + L+S + D T+ +W+ P K+ R+ G+ ++ +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLL 290
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+SPDG +A+ S D+ + +W+ T+ + + GH G + ++ F
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAF 336
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 284 (105.0 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 79/248 (31%), Positives = 120/248 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V +A P + +GS D T+++WDL + TGH + V + S
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + G+ P ++ V+ S+D AR
Sbjct: 259 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYGLDLHPT-IDV----LVTCSRDSTAR 312
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IWDV + V LSGHT AV V+ + I TGS D TI++W+ GK L H
Sbjct: 313 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 372
Query: 283 WVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V ++ L Y +G+ D+ KQ+ P+ L +N I N+ LVSG+D
Sbjct: 373 SVRAVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGAD 431
Query: 338 DFTMFLWE 345
+ TM LW+
Sbjct: 432 NGTMHLWD 439
Score = 189 (71.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 55/209 (26%), Positives = 92/209 (44%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV + P L + S D+T R+WD+ T+ + +GH N V + A +
Sbjct: 285 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 344
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
++GS ++ WD GK L+ HKK + + P H F S S D + + W
Sbjct: 345 ITGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVVLHPRHYT-----FASGSPD-NIKQW 397
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ LSGH + + DGV+ +G+ + T+ +W+ G + + H V
Sbjct: 398 KFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRV--HAA-VQ 454
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMK 314
+L +E + AFD + + + E K
Sbjct: 455 PGSLDSESGIFACAFDQSESRLLTAEADK 483
Score = 187 (70.9 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 62/220 (28%), Positives = 101/220 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 199 ISGHLGWVRCIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 253
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 254 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 313
Query: 307 YSSPEEMKKAALERYNK----IKGNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + ++ A E ++++GS D T+ LW+ V+ + + +T H++
Sbjct: 314 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD-LVAGKTRVTLTNHKK 372
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V V P AS S D +IK W G F+ GH
Sbjct: 373 SVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGH 411
Score = 180 (68.4 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 65/254 (25%), Positives = 112/254 (44%)
Query: 147 TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
+GH WV CIA + V+GS ++ WD +GK + L+GH + G+ V
Sbjct: 200 SGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLS-LTGHISTVRGVI---VST 255
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKV 265
+P S +D + WD+ K + GH AV + V+ T S+D T ++
Sbjct: 256 RSPY--LFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 313
Query: 266 WETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK- 323
W+ + L GH + V ++ + E + TG+ D T + + + L + K
Sbjct: 314 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKS 373
Query: 324 IKGNA--PER--LVSGSDDFTMFLWE-PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
++ P SGS D + W+ P S ++GH ++N + + DG V+ A
Sbjct: 374 VRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQN--LSGHNAIINTLTVNSDGVLVSGA 430
Query: 379 SFDKSIKLWNGTTG 392
+ ++ LW+ TG
Sbjct: 431 D-NGTMHLWDWRTG 443
Score = 169 (64.5 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 55/202 (27%), Positives = 89/202 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V V S L S D V+ WDL + GH + V +
Sbjct: 240 SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 299
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K S + LSGH + + + P + ++ S D
Sbjct: 300 DVLVTCSRDSTARIWDVRT-KASVHTLSGHTNAVATVRCQAAE---P--QIITGSHDTTI 353
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K + L+ H +V V + +GS D IK W+ G I+ L GH
Sbjct: 354 RLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHN 412
Query: 282 HWVNSLALSTEYALRTGAFDHT 303
+N+L ++++ L +GA + T
Sbjct: 413 AIINTLTVNSDGVLVSGADNGT 434
Score = 123 (48.4 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 39/124 (31%), Positives = 55/124 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GHT AV +V Q+ +GS DTT+RLWDL T HK V +
Sbjct: 324 TLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRH 383
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
SGS ++ W G N LSGH I ++ +N+ VS + +G
Sbjct: 384 YTFASGSP-DNIKQWKFPDGSFIQN-LSGHNAIINTLT-----VNSD-GVLVSGADNGTM 435
Query: 223 RIWD 226
+WD
Sbjct: 436 HLWD 439
Score = 38 (18.4 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVE 79
V+ L+ K + +++D+ VPL K K++++
Sbjct: 10 VHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIK 47
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 284 (105.0 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 81/248 (32%), Positives = 120/248 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V +A P + +GS D T+++WDL + TGH + V + S
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + G+ P L+ V+ S+D AR
Sbjct: 259 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYGLDLHPT-LDV----LVTCSRDSTAR 312
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IWDV + V LSGHT AV V+ + I TGS D TI++W+ GK L H
Sbjct: 313 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 372
Query: 283 WVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V ++ L Y +G+ D+ KQ+ P+ L +N I NA LVSG+D
Sbjct: 373 SVRAVVLHPLLYTFASGSPDNI-KQWKFPDGGFIQNLSGHNAIINTLAVNADGVLVSGAD 431
Query: 338 DFTMFLWE 345
+ TM LW+
Sbjct: 432 NGTMHLWD 439
Score = 181 (68.8 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 62/220 (28%), Positives = 101/220 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 199 ISGHLGWVRCIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 253
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 254 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARI 313
Query: 307 YSSPEEMKKAALERYNK----IKGNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + ++ A E ++++GS D T+ LW+ V+ + + +T H++
Sbjct: 314 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD-LVAGKTRVTLTNHKK 372
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V V P AS S D +IK W G F+ GH
Sbjct: 373 SVRAVVLHPLLYTFASGSPD-NIKQWKFPDGGFIQNLSGH 411
Score = 181 (68.8 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 55/215 (25%), Positives = 94/215 (43%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV + P L + S D+T R+WD+ T+ + +GH N V + A +
Sbjct: 285 GHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 344
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
++GS ++ WD GK L+ HKK + + P+ F S S D + + W
Sbjct: 345 ITGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVVLHPLLYT-----FASGSPD-NIKQW 397
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ LSGH + + DGV+ +G+ + T+ +W+ G + + H V
Sbjct: 398 KFPDGGFIQNLSGHNAIINTLAVNADGVLVSGADNGTMHLWDWRTGYNFQRV--HAA-VQ 454
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER 320
+L +E + AFD + + + E K + R
Sbjct: 455 PGSLDSESGIFACAFDRSESRLLTAEADKTIKVYR 489
Score = 177 (67.4 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 63/253 (24%), Positives = 112/253 (44%)
Query: 147 TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
+GH WV CIA + V+GS ++ WD +GK + L+GH + G+ V
Sbjct: 200 SGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLS-LTGHISTVRGVI---VST 255
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKV 265
+P S +D + WD+ K + GH AV + V+ T S+D T ++
Sbjct: 256 RSPY--LFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARI 313
Query: 266 WETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK- 323
W+ + L GH + V ++ + E + TG+ D T + + + L + K
Sbjct: 314 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKS 373
Query: 324 IKGNAPERLV----SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
++ L+ SGS D + W+ + ++GH ++N + + DG V+ A
Sbjct: 374 VRAVVLHPLLYTFASGSPD-NIKQWKFPDGGFIQN-LSGHNAIINTLAVNADGVLVSGAD 431
Query: 380 FDKSIKLWNGTTG 392
+ ++ LW+ TG
Sbjct: 432 -NGTMHLWDWRTG 443
Score = 173 (66.0 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 58/204 (28%), Positives = 91/204 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V V S L S D V+ WDL + GH + V +
Sbjct: 240 SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTL 299
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K S + LSGH + + + P + ++ S D
Sbjct: 300 DVLVTCSRDSTARIWDVRT-KASVHTLSGHTNAVATVRCQAAE---P--QIITGSHDTTI 353
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT---GSQDCTIKVWETTQGKLIRELKG 279
R+WD+ K + L+ H +V V ++YT GS D IK W+ G I+ L G
Sbjct: 354 RLWDLVAGKTRVTLTNHKKSVRAVVL--HPLLYTFASGSPD-NIKQWKFPDGGFIQNLSG 410
Query: 280 HGHWVNSLALSTEYALRTGAFDHT 303
H +N+LA++ + L +GA + T
Sbjct: 411 HNAIINTLAVNADGVLVSGADNGT 434
Score = 129 (50.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 53/190 (27%), Positives = 75/190 (39%)
Query: 236 LSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-- 292
+SGH V C+ G+ TGS D TIK+W+ GKL L GH V + +ST
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 293 YALRTGAFDHTGK----QYSSPEEMKKAALER-YNKIKGNAPERLVSGSDDFTMFLWEPA 347
Y G D K +Y+ L Y + LV+ S D T +W+
Sbjct: 259 YLFSCGE-DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVR 317
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
T ++GH V V + + S D +I+LW+ GK H V
Sbjct: 318 TKASVHT-LSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 376
Query: 408 IRFE-LIYCF 416
+ L+Y F
Sbjct: 377 VVLHPLLYTF 386
Score = 38 (18.4 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVE 79
V+ L+ K + +++D+ VPL K K++++
Sbjct: 10 VHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIK 47
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 284 (105.0 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 79/248 (31%), Positives = 120/248 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V +A P + +GS D T+++WDL + TGH + V + S
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + G+ P ++ V+ S+D AR
Sbjct: 260 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYGLDLHPT-IDV----LVTCSRDSTAR 313
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IWDV + V LSGHT AV V+ + I TGS D TI++W+ GK L H
Sbjct: 314 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 373
Query: 283 WVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V ++ L Y +G+ D+ KQ+ P+ L +N I N+ LVSG+D
Sbjct: 374 SVRAVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGAD 432
Query: 338 DFTMFLWE 345
+ TM LW+
Sbjct: 433 NGTMHLWD 440
Score = 190 (71.9 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 56/215 (26%), Positives = 94/215 (43%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV + P L + S D+T R+WD+ T+ + +GH N V + A +
Sbjct: 286 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 345
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
++GS ++ WD GK L+ HKK + + P H F S S D + + W
Sbjct: 346 ITGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVVLHPRHYT-----FASGSPD-NIKQW 398
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ LSGH + + DGV+ +G+ + T+ +W+ G + + H V
Sbjct: 399 KFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRV--HAA-VQ 455
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER 320
+L +E + AFD + + + E K + R
Sbjct: 456 PGSLDSESGIFACAFDQSESRLLTAEADKTIKVYR 490
Score = 187 (70.9 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 62/220 (28%), Positives = 101/220 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 200 ISGHLGWVRCIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 254
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 255 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 314
Query: 307 YSSPEEMKKAALERYNK----IKGNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + ++ A E ++++GS D T+ LW+ V+ + + +T H++
Sbjct: 315 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD-LVAGKTRVTLTNHKK 373
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V V P AS S D +IK W G F+ GH
Sbjct: 374 SVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGH 412
Score = 180 (68.4 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 65/254 (25%), Positives = 112/254 (44%)
Query: 147 TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
+GH WV CIA + V+GS ++ WD +GK + L+GH + G+ V
Sbjct: 201 SGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLS-LTGHISTVRGVI---VST 256
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKV 265
+P S +D + WD+ K + GH AV + V+ T S+D T ++
Sbjct: 257 RSPY--LFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 314
Query: 266 WETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK- 323
W+ + L GH + V ++ + E + TG+ D T + + + L + K
Sbjct: 315 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKS 374
Query: 324 IKGNA--PER--LVSGSDDFTMFLWE-PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
++ P SGS D + W+ P S ++GH ++N + + DG V+ A
Sbjct: 375 VRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQN--LSGHNAIINTLTVNSDGVLVSGA 431
Query: 379 SFDKSIKLWNGTTG 392
+ ++ LW+ TG
Sbjct: 432 D-NGTMHLWDWRTG 444
Score = 169 (64.5 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 55/202 (27%), Positives = 89/202 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V V S L S D V+ WDL + GH + V +
Sbjct: 241 SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 300
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K S + LSGH + + + P + ++ S D
Sbjct: 301 DVLVTCSRDSTARIWDVRT-KASVHTLSGHTNAVATVRCQAAE---P--QIITGSHDTTI 354
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K + L+ H +V V + +GS D IK W+ G I+ L GH
Sbjct: 355 RLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHN 413
Query: 282 HWVNSLALSTEYALRTGAFDHT 303
+N+L ++++ L +GA + T
Sbjct: 414 AIINTLTVNSDGVLVSGADNGT 435
Score = 123 (48.4 bits), Expect = 0.00070, Sum P(2) = 0.00069
Identities = 39/124 (31%), Positives = 55/124 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GHT AV +V Q+ +GS DTT+RLWDL T HK V +
Sbjct: 325 TLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRH 384
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
SGS ++ W G N LSGH I ++ +N+ VS + +G
Sbjct: 385 YTFASGSP-DNIKQWKFPDGSFIQN-LSGHNAIINTLT-----VNSD-GVLVSGADNGTM 436
Query: 223 RIWD 226
+WD
Sbjct: 437 HLWD 440
Score = 38 (18.4 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVE 79
V+ L+ K + +++D+ VPL K K++++
Sbjct: 10 VHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIK 47
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 284 (105.0 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 79/248 (31%), Positives = 120/248 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V +A P + +GS D T+++WDL + TGH + V + S
Sbjct: 201 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 260
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + G+ P ++ V+ S+D AR
Sbjct: 261 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYGLDLHPT-IDV----LVTCSRDSTAR 314
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IWDV + V LSGHT AV V+ + I TGS D TI++W+ GK L H
Sbjct: 315 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 374
Query: 283 WVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V ++ L Y +G+ D+ KQ+ P+ L +N I N+ LVSG+D
Sbjct: 375 SVRAVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGAD 433
Query: 338 DFTMFLWE 345
+ TM LW+
Sbjct: 434 NGTMHLWD 441
Score = 189 (71.6 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 55/209 (26%), Positives = 92/209 (44%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV + P L + S D+T R+WD+ T+ + +GH N V + A +
Sbjct: 287 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 346
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
++GS ++ WD GK L+ HKK + + P H F S S D + + W
Sbjct: 347 ITGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVVLHPRHYT-----FASGSPD-NIKQW 399
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ LSGH + + DGV+ +G+ + T+ +W+ G + + H V
Sbjct: 400 KFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRV--HAA-VQ 456
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMK 314
+L +E + AFD + + + E K
Sbjct: 457 PGSLDSESGIFACAFDQSESRLLTAEADK 485
Score = 187 (70.9 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 62/220 (28%), Positives = 101/220 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 201 ISGHLGWVRCIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 255
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 256 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 315
Query: 307 YSSPEEMKKAALERYNK----IKGNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + ++ A E ++++GS D T+ LW+ V+ + + +T H++
Sbjct: 316 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD-LVAGKTRVTLTNHKK 374
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V V P AS S D +IK W G F+ GH
Sbjct: 375 SVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGH 413
Score = 185 (70.2 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 72/297 (24%), Positives = 128/297 (43%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAWSADGK 163
AG T AV+ + + +A + W + +++ +GH WV CIA +
Sbjct: 161 AGMTSAVMEAGNAKNSALMAKKAPTMPKPQW--HPPWKLYRVISGHLGWVRCIAVEPGNQ 218
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
V+GS ++ WD +GK + L+GH + G+ V +P S +D +
Sbjct: 219 WFVTGSADRTIKIWDLASGKLKLS-LTGHISTVRGVI---VSTRSPY--LFSCGEDKQVK 272
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
WD+ K + GH AV + V+ T S+D T ++W+ + L GH +
Sbjct: 273 CWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTN 332
Query: 283 WVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK-IKGNA--PER--LVSGS 336
V ++ + E + TG+ D T + + + L + K ++ P SGS
Sbjct: 333 AVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGS 392
Query: 337 DDFTMFLWE-PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
D + W+ P S ++GH ++N + + DG V+ A + ++ LW+ TG
Sbjct: 393 PD-NIKQWKFPDGSFIQN--LSGHNAIINTLTVNSDGVLVSGAD-NGTMHLWDWRTG 445
Score = 169 (64.5 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 55/202 (27%), Positives = 89/202 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V V S L S D V+ WDL + GH + V +
Sbjct: 242 SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 301
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K S + LSGH + + + P + ++ S D
Sbjct: 302 DVLVTCSRDSTARIWDVRT-KASVHTLSGHTNAVATVRCQAAE---P--QIITGSHDTTI 355
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K + L+ H +V V + +GS D IK W+ G I+ L GH
Sbjct: 356 RLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHN 414
Query: 282 HWVNSLALSTEYALRTGAFDHT 303
+N+L ++++ L +GA + T
Sbjct: 415 AIINTLTVNSDGVLVSGADNGT 436
Score = 123 (48.4 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 39/124 (31%), Positives = 55/124 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GHT AV +V Q+ +GS DTT+RLWDL T HK V +
Sbjct: 326 TLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRH 385
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
SGS ++ W G N LSGH I ++ +N+ VS + +G
Sbjct: 386 YTFASGSP-DNIKQWKFPDGSFIQN-LSGHNAIINTLT-----VNSD-GVLVSGADNGTM 437
Query: 223 RIWD 226
+WD
Sbjct: 438 HLWD 441
Score = 38 (18.4 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVE 79
V+ L+ K + +++D+ VPL K K++++
Sbjct: 10 VHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIK 47
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 283 (104.7 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 107/377 (28%), Positives = 176/377 (46%)
Query: 39 SQIVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVN 98
SQ++ K + +K+ A +S L G H+++ E S+V + A +IRP
Sbjct: 93 SQVITKFSDPNKKI--AGQVSMQSLEKIKGVPEAAHRIAGESQASLVKRTLAE-QIRPEW 149
Query: 99 RCSAT----IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
T I+GH V V P + +G+GD T+++WDL + TGH V
Sbjct: 150 HAPWTLMRVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVR 209
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+A S +L S + ++CWD +T K + GH + + P L+ V
Sbjct: 210 GLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRH-YHGHLSGVYALKLHPT-LDV----LV 263
Query: 215 SASKDGDARIWDVSLRKCVICLSGH--TLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGK 272
+A +D AR+WD+ R+ V LSGH T+A V+ D + TGS D TI++W+ GK
Sbjct: 264 TAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQ-EFDPQVVTGSMDSTIRLWDLAAGK 322
Query: 273 LIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----N 327
+ L H V +L+L E+ +G+ D+ K + PE E +N I N
Sbjct: 323 TLTTLTHHKKTVRALSLHPDEFTFASGSSDNI-KHWKFPEGAFMGNFEGHNAIVNTLSIN 381
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGH--QQLVNHVY-FSPDGQ-WVASASFDKS 383
+ + SG+D+ +M W+ +GH Q+L + V S D + + ++SFDK+
Sbjct: 382 SDNVMFSGADNGSMCFWD---------WKSGHKYQELQSVVQPGSLDSEAGIFASSFDKT 432
Query: 384 -IKLWNGTTGKFVAVFR 399
++L K V +++
Sbjct: 433 GLRLITCEADKSVKIYK 449
Score = 171 (65.3 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 59/220 (26%), Positives = 96/220 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ + EP + + F + + D +IWD++ + L+GH V +
Sbjct: 159 ISGHLGWVRCVDVEPGN-----QWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAV 213
Query: 249 GG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V +L L T L T D +
Sbjct: 214 SPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARV 273
Query: 307 YSSPEEMKKAALERYNK-IKGNAPE----RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ L + + A + ++V+GS D T+ LW+ A K T +T H++
Sbjct: 274 WDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKT-LTTLTHHKK 332
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V + PD AS S D +IK W G F+ F GH
Sbjct: 333 TVRALSLHPDEFTFASGSSD-NIKHWKFPEGAFMGNFEGH 371
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 283 (104.7 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 85/293 (29%), Positives = 137/293 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH A+ SV FSP+G+QLA+GS DT + LW L Q F+ GHK+ + + +S G L
Sbjct: 16 GHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNLL 75
Query: 166 VSGSKAGELQCWDP-QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S S+ ++ W P + GK S H + + + +A + SAS+D ++
Sbjct: 76 ASASRDRTIRLWIPDKRGKSS--EFKAHTAPVRSVDF-----SADGQFLASASEDKSIKV 128
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W++ ++ + L HT V C K+ DG +I + S+D TIK+W+TT + + +
Sbjct: 129 WNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGF 188
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PER--LVS 334
N +A + + + DHT K + + K L+ Y G P L++
Sbjct: 189 ANFVAFNPNGTCIASAGSDHTVKIWDI--RVNKL-LQHYQVHSGGVNCVSFHPSGNYLIT 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GH V V FS G+ S D + LW
Sbjct: 246 ASSDGTLKILDLLEGRLIYT-LQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
Score = 250 (93.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 59/181 (32%), Positives = 93/181 (51%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S+ HT V SV FS DG+ LAS S D ++++W++ Q ++ H +WV C +S
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSP 154
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S+ ++ WD T K N S + +++ P N C SA D
Sbjct: 155 DGRLIVSCSEDKTIKIWDT-TNKQCVNNFSDFVGFANFVAFNP---NGTC--IASAGSDH 208
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
+IWD+ + K + H+ V CV + G + T S D T+K+ + +G+LI L+G
Sbjct: 209 TVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 268
Query: 280 H 280
H
Sbjct: 269 H 269
Score = 233 (87.1 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 76/275 (27%), Positives = 119/275 (43%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLS--GHKKWITGISWEPVH 205
GHK + + +S +GK L +GS L W +P GHK IT + + P+
Sbjct: 16 GHKAAITSVDFSPNGKQLATGSWDTFLMLWSL---RPQARAFRYVGHKDVITSVQFSPLG 72
Query: 206 LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIK 264
N SAS+D R+W R HT V V + DG + + S+D +IK
Sbjct: 73 -NL----LASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIK 127
Query: 265 VWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALERYNK 323
VW + + + L H HWV S + L D T K + + K + ++
Sbjct: 128 VWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN---KQCVNNFSD 184
Query: 324 IKGNA------PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
G A P + S D T+ +W+ V+K + H VN V F P G ++
Sbjct: 185 FVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQV-HSGGVNCVSFHPSGNYL 243
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+AS D ++K+ + G+ + +GH GPV+ + F
Sbjct: 244 ITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF 278
Score = 129 (50.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 57/176 (32%), Positives = 85/176 (48%)
Query: 308 SSPEEMKKAALERYNKIKGN---------AP--ERLVSGSDDFTMFLWEPAVSKQPKT-R 355
SSPE+ LERY KG+ +P ++L +GS D + LW ++ Q + R
Sbjct: 3 SSPED---PVLERY--FKGHKAAITSVDFSPNGKQLATGSWDTFLMLW--SLRPQARAFR 55
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLW-NGTTGKFVAVFRGHVGPVYQIRFELIY 414
GH+ ++ V FSP G +ASAS D++I+LW GK + F+ H PV + F
Sbjct: 56 YVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKS-SEFKAHTAPVRSVDFSADG 114
Query: 415 CFRYPSN---FYCVVDMSCCMSLYS------W------SADSRLLLSGSKDSTLKV 455
F ++ V +M LYS W S D RL++S S+D T+K+
Sbjct: 115 QFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 265 (98.3 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 64/202 (31%), Positives = 102/202 (50%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFD 301
VN + EY L +G+ D
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSD 210
Score = 204 (76.9 bits), Expect = 9.6e-16, P = 9.6e-16
Identities = 58/166 (34%), Positives = 79/166 (47%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + F
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Score = 165 (63.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 34/101 (33%), Positives = 52/101 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
K L S + ++ WD GK GH + + + P
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHP 199
Score = 154 (59.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 51/182 (28%), Positives = 84/182 (46%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETT 269
R + D +W ++ C++ L+GHT V V+ + +I GSQ +I+VW+
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 270 QGKLIRELKGHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEEMKKAALERYN----- 322
K++R L GH + SL E+ + +G+ D K + + +K + RY
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEF-VASGSQDTNIKLW---DIRRKGCVFRYRGHSQA 149
Query: 323 -KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ +P+ L S +DD T+ LW+ K + GH VN V F P+ +AS S
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 380 FD 381
D
Sbjct: 209 SD 210
Score = 123 (48.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 28/70 (40%), Positives = 38/70 (54%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGS 169
+ L SGS
Sbjct: 199 PNEYLLASGS 208
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 278 (102.9 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 79/292 (27%), Positives = 135/292 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +A+ SV FS + +QLASGS D+ + +W + Q+ ++ GHK+ V C+ +S G L
Sbjct: 17 GHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
SGS+ ++ W P K H + VH + + V+AS D ++W
Sbjct: 77 ASGSRDKTVRIWIPNV-KGESTVFRAHTATVRS-----VHFCSDGQSLVTASDDKTVKVW 130
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
+K + LS H V C ++ DG +I + S D T+K+W+ T + + HG +V
Sbjct: 131 STHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 285 NSLALSTE-YALRTGAFDHTGKQYS-------SPEEMKKAALERYN-KIKGNAPERLVSG 335
+ + + D+T K + ++ AA+ + GN L++
Sbjct: 191 TYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY---LLTA 247
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GHQ V FS G++ AS D+ + +W
Sbjct: 248 SSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 250 (93.1 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 61/205 (29%), Positives = 100/205 (48%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ L + S D TV++W + Q +F + H NWV C +S
Sbjct: 96 STVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSP 155
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD +T + + H ++T + + P + C +AS D
Sbjct: 156 DGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHP---SGTC--IAAASMDN 209
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WDV + + H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHG 269
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H ++A S RTG + +G
Sbjct: 270 HQGPATTVAFS-----RTGEYFASG 289
Score = 245 (91.3 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 73/218 (33%), Positives = 105/218 (48%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ ++P +R + AGH +AV V FSP G LASGS D TVR+W N + H
Sbjct: 45 VWHMKPQSR-AYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHT 103
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
V + + +DG+ LV+ S ++ W K + LS H W+ + P
Sbjct: 104 ATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFS-LSQHINWVRCARFSP-----DG 157
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETT 269
R VSAS D ++WD + R+CV H VT V + G I S D T+KVW+
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVR 217
Query: 270 QGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGK 305
+L++ + H VN+L+ S Y L T + D T K
Sbjct: 218 THRLLQHYQLHSAAVNALSFHPSGNYLL-TASSDSTLK 254
Score = 218 (81.8 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 73/275 (26%), Positives = 118/275 (42%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP--LSGHKKWITGISWEPV- 204
GH++ + + +S + K L SGS L W KP +GHK +T +++ P
Sbjct: 17 GHRDAITSVDFSLNTKQLASGSMDSCLMVWHM---KPQSRAYRFAGHKDAVTCVNFSPSG 73
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTI 263
HL A S S+D RIW +++ HT V V + DG + T S D T+
Sbjct: 74 HLLA------SGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTV 127
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNK 323
KVW T + K + L H +WV S + L A D K ++ + + Y +
Sbjct: 128 KVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDD--KTVKLWDKTSRECVHSYCE 185
Query: 324 IKGNA------PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
G P + + S D T+ +W+ + + H VN + F P G ++
Sbjct: 186 HGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQL-HSAAVNALSFHPSGNYL 244
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+AS D ++K+ + G+ + GH GP + F
Sbjct: 245 LTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF 279
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 62/240 (25%), Positives = 101/240 (42%)
Query: 238 GHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YAL 295
GH A+T V + + +GS D + VW GH V + S + L
Sbjct: 17 GHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 296 RTGAFDHTGKQYSSPEEMKKAALERYNK-IKG----NAPERLVSGSDDFTMFLWEPAVSK 350
+G+ D T + + + + + ++ + + LV+ SDD T+ +W K
Sbjct: 77 ASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQK 136
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ ++ H V FSPDG+ + SAS DK++KLW+ T+ + V + H G V + F
Sbjct: 137 FLFS-LSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDF 195
Query: 411 ELI-YCFRYPS--NFYCVVDM------------SCCMSLYSWSADSRLLLSGSKDSTLKV 455
C S N V D+ S ++ S+ LL+ S DSTLK+
Sbjct: 196 HPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKI 255
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 291 (107.5 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 87/313 (27%), Positives = 153/313 (48%)
Query: 92 FRIRPVNRCSATIAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
+R RPV + + GH + V++ + FS G ++ SGS D T+++W + GH
Sbjct: 979 WRSRPVRK-PKVLKGHDDHVITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCLRTLVGHT 1035
Query: 151 NWVLCIAWSAD--GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA 208
V WS+ G ++SGS L+ WD +G + L GH + +HL+
Sbjct: 1036 GGV----WSSQMSGNIIISGSTDRTLKVWDMDSGA-CVHTLQGHTSTV-----RCMHLHG 1085
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWET 268
+ VS S+D R+WD+ C+ L GH AV CV++ G +I +G+ D +K+W
Sbjct: 1086 S--KVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGK-LIVSGAYDYMVKIWHP 1142
Query: 269 TQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA 328
+ + + L+GH + V SL + + +G+ D + + + K L + +
Sbjct: 1143 ERQECLHTLQGHTNRVYSLQFDGLHVV-SGSLDTSIRVWDVETGNCKHTLMGHQSLTSGM 1201
Query: 329 PER---LVSGSDDFTMFLWEPAVSKQPKTRMTG---HQQLVNHVYFSPDGQWVASASFDK 382
R LVSG+ D T+ +W+ + +T ++G H V + F+ ++V ++S D
Sbjct: 1202 ELRQNILVSGNADSTVKVWDITTGQCLQT-LSGPNKHHSAVTCLQFN--SRFVVTSSDDG 1258
Query: 383 SIKLWNGTTGKFV 395
++KLW+ TG F+
Sbjct: 1259 TVKLWDVKTGDFI 1271
Score = 238 (88.8 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 74/257 (28%), Positives = 122/257 (47%)
Query: 148 GHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
GH + V+ C+ +S G +VSGS L+ W GK L GH TG W +
Sbjct: 992 GHDDHVITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCL-RTLVGH----TGGVWSS-QM 1043
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVW 266
+ +S S D ++WD+ CV L GHT V C+ G V+ +GS+D T++VW
Sbjct: 1044 SGNI--IISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVV-SGSRDATLRVW 1100
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIK 325
+ QG + L GH V + + + +GA+D+ K + + L+ + N++
Sbjct: 1101 DIEQGSCLHVLVGHLAAVRCVQYDGKLIV-SGAYDYMVKIWHPERQECLHTLQGHTNRVY 1159
Query: 326 GNAPERL--VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ L VSGS D ++ +W+ T M GHQ L + + + + S + D +
Sbjct: 1160 SLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLM-GHQSLTSGMELRQN--ILVSGNADST 1216
Query: 384 IKLWNGTTGKFVAVFRG 400
+K+W+ TTG+ + G
Sbjct: 1217 VKVWDITTGQCLQTLSG 1233
Score = 236 (88.1 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 61/193 (31%), Positives = 97/193 (50%)
Query: 90 AVFRIRPVNR--CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT 147
A R+ + + C + GH AV V + DG+ + SG+ D V++W Q +
Sbjct: 1095 ATLRVWDIEQGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTLQ 1152
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GH N V + + DG H+VSGS ++ WD +TG + L GH+ +G+ + N
Sbjct: 1153 GHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCK-HTLMGHQSLTSGME---LRQN 1206
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSG---HTLAVTCVKWGGDGVIYTGSQDCTIK 264
VS + D ++WD++ +C+ LSG H AVTC+++ V+ T S D T+K
Sbjct: 1207 I----LVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVV-TSSDDGTVK 1261
Query: 265 VWETTQGKLIREL 277
+W+ G IR L
Sbjct: 1262 LWDVKTGDFIRNL 1274
Score = 183 (69.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 68/262 (25%), Positives = 115/262 (43%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
R VS S D ++W KC+ L GHT V + G+ +I +GS D T+KVW+ G
Sbjct: 1007 RIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGN-IIISGSTDRTLKVWDMDSG 1065
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPE----EMKKAALERYNKIKGN 327
+ L+GH V + L + +G+ D T + + + + L ++ +
Sbjct: 1066 ACVHTLQGHTSTVRCMHLHGSKVV-SGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYD 1124
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
+ +VSG+ D+ + +W P + T + GH V + F DG V S S D SI++W
Sbjct: 1125 G-KLIVSGAYDYMVKIWHPERQECLHT-LQGHTNRVYSLQF--DGLHVVSGSLDTSIRVW 1180
Query: 388 NGTTGKFVAVFRGHVGPV--YQIRFELIYCFRYPSNF--YCVVDMSCCMSLYS----WSA 439
+ TG GH ++R ++ S + + C +L SA
Sbjct: 1181 DVETGNCKHTLMGHQSLTSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSA 1240
Query: 440 ------DSRLLLSGSKDSTLKV 455
+SR +++ S D T+K+
Sbjct: 1241 VTCLQFNSRFVVTSSDDGTVKL 1262
Score = 182 (69.1 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 63/235 (26%), Positives = 109/235 (46%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH +TC+++ G+ ++ +GS D T+KVW GK +R L GH V S +S
Sbjct: 990 LKGHDDHVITCLQFSGNRIV-SGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNII 1048
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERYN---KIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
+ +G+ D T K + L+ + + ++VSGS D T+ +W+
Sbjct: 1049 I-SGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIEQGSC 1107
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
+ GH V V + DG+ + S ++D +K+W+ + + +GH VY ++F+
Sbjct: 1108 LHV-LVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFD 1164
Query: 412 LIYCFRYPSNFYCVV-DMSC--C-------MSLYS-WSADSRLLLSGSKDSTLKV 455
++ + V D+ C SL S +L+SG+ DST+KV
Sbjct: 1165 GLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQNILVSGNADSTVKV 1219
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 286 (105.7 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 76/252 (30%), Positives = 122/252 (48%)
Query: 104 IAGHTEAVLSVAFSPD-GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H+ V S+ GR LA+G D V +W ++ + TGH + V CI +++
Sbjct: 16 IVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +V+GS +G L+ WD + K L GHK I+ + + P+ S S D +
Sbjct: 76 ERVVAGSLSGSLRLWDLEAAKIL-RTLMGHKASISSLDFHPMG-----EYLASGSVDSNI 129
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WDV + CV GHT AV C+ + DG + + S D T+K+W+ GK+I E H
Sbjct: 130 KLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHT 189
Query: 282 HWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA---PER--LVSG 335
VN + EY L +G+ D T K + + + E + + P+ L SG
Sbjct: 190 SAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSG 249
Query: 336 SDD-FTMFLWEP 346
S++ ++ WEP
Sbjct: 250 SENTLRVYGWEP 261
Score = 222 (83.2 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 62/211 (29%), Positives = 100/211 (47%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETT 269
R + +D IW VS C++ L+GHT AV C+++ + + GS ++++W+
Sbjct: 34 RLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLE 93
Query: 270 QGKLIRELKGHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEEMKKAALERYN----- 322
K++R L GH ++SL EY L +G+ D K + + +K + RY
Sbjct: 94 AAKILRTLMGHKASISSLDFHPMGEY-LASGSVDSNIKLW---DVRRKGCVFRYKGHTQA 149
Query: 323 -KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ +P+ L S SDD T+ LW+ K T T H VN V F P+ +AS S
Sbjct: 150 VRCLAFSPDGKWLASASDDSTVKLWDLIAGKMI-TEFTSHTSAVNVVQFHPNEYLLASGS 208
Query: 380 FDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
D+++KLW+ + G G V + F
Sbjct: 209 ADRTVKLWDLEKFNMIGSSEGETGVVRSVLF 239
Score = 220 (82.5 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 61/204 (29%), Positives = 99/204 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH ++ S+ F P G LASGS D+ ++LWD+ + +F+ GH V C+A+S DG
Sbjct: 100 TLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S S ++ WD GK + H + + + P S S D
Sbjct: 160 KWLASASDDSTVKLWDLIAGKMI-TEFTSHTSAVNVVQFHPNEY-----LLASGSADRTV 213
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKV--WETTQGKLIRELKG 279
++WD+ + G T V V + DG +Y+GS++ T++V WE + + + G
Sbjct: 214 KLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSEN-TLRVYGWEPDRCFDVVHV-G 271
Query: 280 HGHWVNSLALSTEYALRTGAFDHT 303
G V+ LA+S + ++ HT
Sbjct: 272 WGK-VSDLAISNNQMIAV-SYSHT 293
Score = 199 (75.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 52/209 (24%), Positives = 100/209 (47%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C ++ GHT AV + F+ ++ +GS ++RLWDL + GHK + + +
Sbjct: 55 CIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFH 114
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
G++L SGS ++ WD + K GH + + +++ P + SAS D
Sbjct: 115 PMGEYLASGSVDSNIKLWDVRR-KGCVFRYKGHTQAVRCLAFSP-----DGKWLASASDD 168
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELK 278
++WD+ K + + HT AV V++ + ++ +GS D T+K+W+ + +I +
Sbjct: 169 STVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSE 228
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQY 307
G V S+ + + + ++T + Y
Sbjct: 229 GETGVVRSVLFNPDGSCLYSGSENTLRVY 257
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 59/226 (26%), Positives = 101/226 (44%)
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL-ST 291
++ S + ++ K G ++ TG +DC + +W ++ I L GH V + S+
Sbjct: 16 IVAHSSNVSSLVLGKSSGR-LLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSS 74
Query: 292 EYALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKGNA--P--ERLVSGSDDFTMFLWEP 346
E + G+ + + + ++ + + I P E L SGS D + LW+
Sbjct: 75 EERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDV 134
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY 406
K R GH Q V + FSPDG+W+ASAS D ++KLW+ GK + F H V
Sbjct: 135 R-RKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVN 193
Query: 407 QIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDST 452
++F +P N Y + S ++ W + ++ S+ T
Sbjct: 194 VVQF-------HP-NEYLLASGSADRTVKLWDLEKFNMIGSSEGET 231
Score = 159 (61.0 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 69/284 (24%), Positives = 125/284 (44%)
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS-ADGKHLVSGSKAGELQCWDPQTGKPSG- 186
+TT+ W L + H + V + + G+ L +G + + W KP+
Sbjct: 5 NTTITSWKLQ------EIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIW--AVSKPNCI 56
Query: 187 NPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCV 246
L+GH + G + N+ R V+ S G R+WD+ K + L GH +++ +
Sbjct: 57 MSLTGHTSAV-GC----IQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSL 111
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTG 304
+ G + +GS D IK+W+ + + KGH V LA S + L + + D T
Sbjct: 112 DFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTV 171
Query: 305 KQYS--SPEEMKK--AALERYNKIKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGH 359
K + + + + + + N ++ + E L+ SGS D T+ LW+ + G
Sbjct: 172 KLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSS-EGE 230
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
+V V F+PDG + S S + +++++ + V HVG
Sbjct: 231 TGVVRSVLFNPDGSCLYSGS-ENTLRVYGWEPDRCFDVV--HVG 271
Score = 150 (57.9 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 41/113 (36%), Positives = 57/113 (50%)
Query: 66 PLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLAS 125
P+G YL V L V + VFR + GHT+AV +AFSPDG+ LAS
Sbjct: 115 PMGEYLASGSVDSNIKLWDVRRKGCVFRYK----------GHTQAVRCLAFSPDGKWLAS 164
Query: 126 GSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
S D+TV+LWDL + + T H + V + + + L SGS ++ WD
Sbjct: 165 ASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWD 217
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 277 (102.6 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 80/294 (27%), Positives = 140/294 (47%)
Query: 103 TIAGHTEAVLSVAFS-PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T+ GH V ++AF+ P G ++A+GS D T +LW T + GH ++C+A++
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQ 188
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ +GS + WD ++G+ L+GH I + + N R V+ S D
Sbjct: 189 STLVATGSMDTTAKLWDVESGEEVST-LAGHFAEIISLCF-----NTTGDRLVTGSFDHT 242
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGH 280
A +WDV + V LSGH ++CV++ D +I T S D + KVW+ G+ + L GH
Sbjct: 243 AILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGH 302
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGNAP-ERLVS 334
V + + T + T + D T + +S+ LE + +K+ NA R+++
Sbjct: 303 NDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLT 362
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
S D T +W + + GH + F+ +G + + S D + ++W+
Sbjct: 363 ASVDKTSRVWCVKTGACLQV-LEGHSDEIFSCAFNYEGDTIITGSKDNTCRIWH 415
Score = 252 (93.8 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 81/316 (25%), Positives = 142/316 (44%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD-G 162
+ H + +VAF+ G +GS D T ++WD + + GH+N V IA++ G
Sbjct: 88 LQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +GS + W +TGK GH I +++ P + S D A
Sbjct: 148 DKVATGSFDKTCKLWSAETGK-CFYTFRGHTAEIVCLAFNP-----QSTLVATGSMDTTA 201
Query: 223 RIWDVSLRKCVICLSGHTLAVT--CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
++WDV + V L+GH + C GD ++ TGS D T +W+ G+ + L GH
Sbjct: 202 KLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLV-TGSFDHTAILWDVPSGRKVHVLSGH 260
Query: 281 GHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPERLVS- 334
++ + + + +L T + D + K + + A L +N + N +L++
Sbjct: 261 RGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIAT 320
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
S D T ++ Q ++ GH+ ++ V F+ G V +AS DK+ ++W TG
Sbjct: 321 ASADGTSRVFSTDTF-QCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGAC 379
Query: 395 VAVFRGHVGPVYQIRF 410
+ V GH ++ F
Sbjct: 380 LQVLEGHSDEIFSCAF 395
Score = 245 (91.3 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 68/254 (26%), Positives = 123/254 (48%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T GHT ++ +AF+P +A+GS DTT +LWD+ + + GH ++ + +
Sbjct: 168 KCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCF 227
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
+ G LV+GS WD +G+ + LSGH+ I+ + + N C +AS
Sbjct: 228 NTTGDRLVTGSFDHTAILWDVPSGRKV-HVLSGHRGEISCVQF-----NWDCSLIATASL 281
Query: 219 DGDARIWDVSLRKCVICLSGHTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRE 276
D ++WD +C+ L GH V C + G +I T S D T +V+ T + + +
Sbjct: 282 DKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQ-LIATASADGTSRVFSTDTFQCLCQ 340
Query: 277 LKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYN-KIKGNA----PE 330
L+GH ++ + + + + + T + D T + + LE ++ +I A +
Sbjct: 341 LEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGD 400
Query: 331 RLVSGSDDFTMFLW 344
+++GS D T +W
Sbjct: 401 TIITGSKDNTCRIW 414
Score = 231 (86.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 74/253 (29%), Positives = 111/253 (43%)
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG---GDGVIYTGSQDCTIKVWETT 269
F++ S D +IWD + + + L GH V + + GD V TGS D T K+W
Sbjct: 107 FITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVA-TGSFDKTCKLWSAE 165
Query: 270 QGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYS--SPEEMKKAA---LERYNK 323
GK +GH + LA + + L TG+ D T K + S EE+ A E +
Sbjct: 166 TGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISL 225
Query: 324 IKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+RLV+GS D T LW+ ++ ++GH+ ++ V F+ D +A+AS DKS
Sbjct: 226 CFNTTGDRLVTGSFDHTAILWDVPSGRKVHV-LSGHRGEISCVQFNWDCSLIATASLDKS 284
Query: 384 IKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRL 443
K+W+ G+ +A GH V + CF Y ++S L
Sbjct: 285 CKVWDAEGGQCLATLLGHNDEVLDV------CFNYTGQLIATASADGTSRVFSTDTFQCL 338
Query: 444 L-LSGSKDSTLKV 455
L G K KV
Sbjct: 339 CQLEGHKGEISKV 351
Score = 164 (62.8 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 48/173 (27%), Positives = 84/173 (48%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
P R ++GH + V F+ D +A+ S D + ++WD + GH + VL
Sbjct: 249 PSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLD 308
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ ++ G+ + + S G + + T + L GHK I+ + + NA R ++
Sbjct: 309 VCFNYTGQLIATASADGTSRVFSTDTFQCLCQ-LEGHKGEISKVCF-----NAQGSRVLT 362
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAV-TCV-KWGGDGVIYTGSQDCTIKVW 266
AS D +R+W V C+ L GH+ + +C + GD +I TGS+D T ++W
Sbjct: 363 ASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTII-TGSKDNTCRIW 414
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 281 (104.0 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 79/248 (31%), Positives = 119/248 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V +A P + +GS D T+++WDL + TGH + V + S
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + G+ P ++ V+ S+D AR
Sbjct: 260 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYGLDLHPT-IDV----LVTCSRDSTAR 313
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IWDV + V LSGHT AV V+ + I TGS D TI++W+ GK L H
Sbjct: 314 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 373
Query: 283 WVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V ++ L Y +G+ D+ KQ+ P+ L +N I N LVSG+D
Sbjct: 374 SVRAVVLHPLHYTFASGSPDNI-KQWKFPDGGFIQNLSGHNAIINTLAVNTDGVLVSGAD 432
Query: 338 DFTMFLWE 345
+ TM LW+
Sbjct: 433 NGTMHLWD 440
Score = 190 (71.9 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 56/215 (26%), Positives = 95/215 (44%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV + P L + S D+T R+WD+ T+ + +GH N V + A +
Sbjct: 286 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 345
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
++GS ++ WD GK L+ HKK + + P+H F S S D + + W
Sbjct: 346 ITGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVVLHPLHYT-----FASGSPD-NIKQW 398
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ LSGH + + DGV+ +G+ + T+ +W+ G + + H V
Sbjct: 399 KFPDGGFIQNLSGHNAIINTLAVNTDGVLVSGADNGTMHLWDWRTGYNFQRV--HAA-VQ 455
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER 320
+L +E + AFD + + + E K + R
Sbjct: 456 PGSLDSESGIFACAFDRSESRLLTAEADKTIKVYR 490
Score = 183 (69.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 62/220 (28%), Positives = 101/220 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 200 ISGHLGWVRCIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 254
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 255 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 314
Query: 307 YSSPEEMKKAALERYNK----IKGNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + ++ A E ++++GS D T+ LW+ V+ + + +T H++
Sbjct: 315 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD-LVAGKTRVTLTNHKK 373
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V V P AS S D +IK W G F+ GH
Sbjct: 374 SVRAVVLHPLHYTFASGSPD-NIKQWKFPDGGFIQNLSGH 412
Score = 176 (67.0 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 63/253 (24%), Positives = 111/253 (43%)
Query: 147 TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
+GH WV CIA + V+GS ++ WD +GK + L+GH + G+ V
Sbjct: 201 SGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLS-LTGHISTVRGVI---VST 256
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKV 265
+P S +D + WD+ K + GH AV + V+ T S+D T ++
Sbjct: 257 RSPY--LFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 314
Query: 266 WETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK- 323
W+ + L GH + V ++ + E + TG+ D T + + + L + K
Sbjct: 315 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKS 374
Query: 324 IKGNAPERL----VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
++ L SGS D + W+ + ++GH ++N + + DG V+ A
Sbjct: 375 VRAVVLHPLHYTFASGSPD-NIKQWKFPDGGFIQN-LSGHNAIINTLAVNTDGVLVSGAD 432
Query: 380 FDKSIKLWNGTTG 392
+ ++ LW+ TG
Sbjct: 433 -NGTMHLWDWRTG 444
Score = 173 (66.0 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 57/202 (28%), Positives = 90/202 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V V S L S D V+ WDL + GH + V +
Sbjct: 241 SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 300
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K S + LSGH + + + P + ++ S D
Sbjct: 301 DVLVTCSRDSTARIWDVRT-KASVHTLSGHTNAVATVRCQAAE---P--QIITGSHDTTI 354
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K + L+ H +V V + +GS D IK W+ G I+ L GH
Sbjct: 355 RLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPD-NIKQWKFPDGGFIQNLSGHN 413
Query: 282 HWVNSLALSTEYALRTGAFDHT 303
+N+LA++T+ L +GA + T
Sbjct: 414 AIINTLAVNTDGVLVSGADNGT 435
Score = 38 (18.4 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVE 79
V+ L+ K + +++D+ VPL K K++++
Sbjct: 10 VHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIK 47
Score = 37 (18.1 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 10/35 (28%), Positives = 12/35 (34%)
Query: 19 EGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLP 53
E P AP +P P Q V L+ P
Sbjct: 67 EKGPQNAPDSYPHKQYPANQGQDVEYLVTGTHPYP 101
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 196 (74.1 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 74/303 (24%), Positives = 132/303 (43%)
Query: 100 CSATIAGHTEAVLSV--AFSPDGRQL-ASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
CS +AGH E VLS+ S G L +GS D TVRLW+ +++ + TGH +L +
Sbjct: 393 CSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAV 452
Query: 157 AWSADG-KHLVSGSKAGELQCWDPQ-TGKPSGNPLSGHKKWITGISWEPVHLNAPCRR-- 212
A++ VSGS L+ W + S P++ + + + ++ A R
Sbjct: 453 AFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDS 512
Query: 213 -FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQ 270
+ S+D A IW + V+ L GH + V++ D + T S D T+K+W +
Sbjct: 513 LVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISD 572
Query: 271 GKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHTGKQYSSPEEMKKAALERY-NKI--- 324
G ++ +GH V + T+ + GA D K ++ A +++ +K+
Sbjct: 573 GSCLKTFEGHTSSVLRASFITDGTQFVSCGA-DGLLKLWNVNTSECIATYDQHEDKVWAL 631
Query: 325 -KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
G E + +G D + LW + + + ++ + + V A + K+
Sbjct: 632 AVGKKTEMIATGGGDAVINLWHDSTASDKEDDFRKEEEAILRGQELENA--VLDAEYTKA 689
Query: 384 IKL 386
I+L
Sbjct: 690 IRL 692
Score = 183 (69.5 bits), Expect = 7.2e-22, Sum P(2) = 7.2e-22
Identities = 45/171 (26%), Positives = 84/171 (49%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
+TI G ++ + ++A SPD + L S +R+WDL T + GH+ V+ +A A
Sbjct: 54 STIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHAS 113
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
G L + ++ WD G + + GHK ++ I + P ++ +S S D
Sbjct: 114 GGLLATAGADRKVLVWDVDGGFCT-HYFRGHKGVVSSILFHP---DSNKNILISGSDDAT 169
Query: 222 ARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
R+WD++ + KC+ + H AVT + DG+ +++ +D + +W+
Sbjct: 170 VRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWD 220
Score = 154 (59.3 bits), Expect = 7.2e-22, Sum P(2) = 7.2e-22
Identities = 54/184 (29%), Positives = 90/184 (48%)
Query: 244 TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALR-TGAFD 301
TCV G+ +I TGS+D T+++W T I GH + ++A + + ++ +G+ D
Sbjct: 409 TCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGD 468
Query: 302 HTGKQYS---------SPEEMK-KAALERYNK-IKGNAPER---LV-SGSDDFTMFLWEP 346
T K +S P +K ++ + ++K I A R LV +GS+D T +W
Sbjct: 469 RTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRL 528
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY 406
T + GH++ + V FS Q V +AS DK++K+W + G + F GH V
Sbjct: 529 PDLVHVVT-LKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVL 587
Query: 407 QIRF 410
+ F
Sbjct: 588 RASF 591
Score = 151 (58.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 74/313 (23%), Positives = 128/313 (40%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQ-LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI--A 157
S + G+ E + + F D Q LA + VR++D+ T + + GHK VL +
Sbjct: 351 SKRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTC 410
Query: 158 WSADGKHL-VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
S+ G L V+GSK ++ W+ T K +GH I +++ + FVS
Sbjct: 411 VSSSGNVLIVTGSKDKTVRLWNA-TSKSCIGVGTGHNGDILAVAFAKKSFSF----FVSG 465
Query: 217 SKDGDARIWD-----------VSLRKCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIK 264
S D ++W ++L+ + ++ H + V D ++ TGS+D T
Sbjct: 466 SGDRTLKVWSLDGISEDSEEPINLKTRSV-VAAHDKDINSVAVARNDSLVCTGSEDRTAS 524
Query: 265 VWETTQGKLIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERYNK 323
+W + LKGH + S+ ST + + T + D T K ++ + E +
Sbjct: 525 IWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTS 584
Query: 324 IKGNAP-----ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
A + VS D + LW S+ T H+ V + + +A+
Sbjct: 585 SVLRASFITDGTQFVSCGADGLLKLWNVNTSECIAT-YDQHEDKVWALAVGKKTEMIATG 643
Query: 379 SFDKSIKLWNGTT 391
D I LW+ +T
Sbjct: 644 GGDAVINLWHDST 656
Score = 132 (51.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 40/173 (23%), Positives = 73/173 (42%)
Query: 96 PVN-RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
P+N + + +A H + + SVA + + + +GS D T +W L + GHK +
Sbjct: 486 PINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIF 545
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ +S + +++ S ++ W G GH + S+ +FV
Sbjct: 546 SVEFSTVDQCVMTASGDKTVKIWAISDGSCL-KTFEGHTSSVLRASFI-----TDGTQFV 599
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVW 266
S DG ++W+V+ +C+ H V + G +I TG D I +W
Sbjct: 600 SCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 115 (45.5 bits), Expect = 8.4e-18, Sum P(2) = 8.4e-18
Identities = 48/188 (25%), Positives = 80/188 (42%)
Query: 237 SGHTLAVTCVKWGGDGVIYTGSQDCTIKVW----------ETTQGKLIRELKGHGHWVNS 286
+G LAV K + +GS D T+KVW E K + H +NS
Sbjct: 446 NGDILAVAFAKKSFSFFV-SGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINS 504
Query: 287 LALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPERLV-SGSDDFT 340
+A++ +L TG+ D T + P+ + L+ + + ++ + ++ V + S D T
Sbjct: 505 VAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKT 564
Query: 341 MFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG 400
+ +W + KT GH V F DG S D +KLWN T + +A +
Sbjct: 565 VKIWAISDGSCLKT-FEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQ 623
Query: 401 HVGPVYQI 408
H V+ +
Sbjct: 624 HEDKVWAL 631
Score = 115 (45.5 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 40/166 (24%), Positives = 67/166 (40%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C + GH V+ +A G LA+ D V +WD++ GHK V I +
Sbjct: 93 KCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILF 152
Query: 159 SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
D L+SGS ++ WD L+ +K + ++ + L+ SA
Sbjct: 153 HPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVT--SIALSEDGLTLFSA 210
Query: 217 SKDGDARIWDVSLRKCVICLSGHTL--AVTCVKWGGDGVIYTGSQD 260
+D +WD+ C ++ + + AVT V G + S D
Sbjct: 211 GRDKVVNLWDLHDYSCKATVATYEVLEAVTTVSSGTPFASFVASLD 256
Score = 81 (33.6 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 33/135 (24%), Positives = 56/135 (41%)
Query: 333 VSGSDDFTMFLWE-PAVSK---QP---KTR--MTGHQQLVNHVYFSPDGQWVASASFDKS 383
VSGS D T+ +W +S+ +P KTR + H + +N V + + V + S D++
Sbjct: 463 VSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRT 522
Query: 384 IKLWNGTTGKFVAVFRGHVGPVYQIRFELI-YCFRYPSN-----FYCVVDMSCCMSLYSW 437
+W V +GH ++ + F + C S + + D SC + +
Sbjct: 523 ASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSC-LKTFEG 581
Query: 438 SADSRLLLSGSKDST 452
S L S D T
Sbjct: 582 HTSSVLRASFITDGT 596
Score = 45 (20.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 10/31 (32%), Positives = 21/31 (67%)
Query: 425 VVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
V+ + C+S S+ + L+++GSKD T+++
Sbjct: 404 VLSLDTCVS----SSGNVLIVTGSKDKTVRL 430
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 271 (100.5 bits), Expect = 8.6e-22, P = 8.6e-22
Identities = 86/312 (27%), Positives = 145/312 (46%)
Query: 89 QAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG 148
Q +FR + R GH+ + + F PDG Q+A+ S D+TV LW+LN +
Sbjct: 2 QGLFRDPALER---HFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFAS 58
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-HLN 207
H V +AWS G + S ++ W+P+ SG ++ H K + + ++ HL
Sbjct: 59 HSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVA-HSKAVRSVDFDSTGHL- 116
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVW 266
++AS D A+IW V+ R+ V + V K+ +G ++ T S D +++++
Sbjct: 117 -----MLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIY 171
Query: 267 ETTQGKLIR----------ELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKA 316
+ G+ +R +L H W N LA++ R FD +G Q + A
Sbjct: 172 DVDSGECVRTFTEERAAPRQLAWHP-WGNMLAVALG-CNRIKIFDVSGSQLLQLYVVHSA 229
Query: 317 ALERYNKIKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ N + + L+SGSDD T+ + + + +P +TGH VN V FS DG
Sbjct: 230 PV---NDVAFHPSGHFLLSGSDDRTIRILD-LLEGRPIYTLTGHTDAVNAVAFSRDGDKF 285
Query: 376 ASASFDKSIKLW 387
A+ D+ + +W
Sbjct: 286 ATGGSDRQLLVW 297
Score = 149 (57.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 60/273 (21%), Positives = 106/273 (38%)
Query: 147 TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
TGH + + + DG + + S + W+ + H + G++W P
Sbjct: 15 TGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIR-FASHSAPVNGVAWSPKG- 72
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKV 265
N SA D +IW+ LR H+ AV V + G ++ T S D + K+
Sbjct: 73 NL----VASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKI 128
Query: 266 WETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYS--SPEEMKKAALERY- 321
W + + + +WV S S L T + D + + Y S E ++ ER
Sbjct: 129 WRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAA 188
Query: 322 -NKIKGNAPERLVS---GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVAS 377
++ + +++ G + +F Q H VN V F P G ++ S
Sbjct: 189 PRQLAWHPWGNMLAVALGCNRIKIF---DVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLS 245
Query: 378 ASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
S D++I++ + G+ + GH V + F
Sbjct: 246 GSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAF 278
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 279 (103.3 bits), Expect = 9.7e-22, P = 9.7e-22
Identities = 83/305 (27%), Positives = 150/305 (49%)
Query: 99 RCSATIAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
R + GH + V++ + F G ++ SGS D T+++W T + GH V
Sbjct: 293 RSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---- 346
Query: 158 WSADGKH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
WS+ + ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS
Sbjct: 347 WSSQMRDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVS 398
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
S+D R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ +
Sbjct: 399 GSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLH 457
Query: 276 ELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---L 332
L+GH + V SL + + +G+ D + + + L + + + L
Sbjct: 458 TLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNIL 516
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
VSG+ D T+ +W+ + +T + HQ V + F+ + +V ++S D ++KLW+
Sbjct: 517 VSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLK 574
Query: 391 TGKFV 395
TG+F+
Sbjct: 575 TGEFI 579
Score = 254 (94.5 bits), Expect = 7.2e-19, P = 7.2e-19
Identities = 63/182 (34%), Positives = 98/182 (53%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C + GH AV V + DGR++ SG+ D V++WD T+T + GH N V + +
Sbjct: 414 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 471
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG H+VSGS ++ WD +TG + L+GH+ +G+ + L VS +
Sbjct: 472 --DGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQSLTSGMELKDNIL-------VSGNA 521
Query: 219 DGDARIWDVSLRKCVICLSG---HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
D +IWD+ +C+ L G H AVTC+++ + VI T S D T+K+W+ G+ IR
Sbjct: 522 DSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVI-TSSDDGTVKLWDLKTGEFIR 580
Query: 276 EL 277
L
Sbjct: 581 NL 582
Score = 220 (82.5 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 73/279 (26%), Positives = 127/279 (45%)
Query: 148 GHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
GH + V+ C+ + G +VSGS L+ W TGK L GH TG W
Sbjct: 300 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-RTLVGH----TGGVWSSQMR 352
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVW 266
+ +S S D ++W+ +C+ L GHT V C+ V+ +GS+D T++VW
Sbjct: 353 D---NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVW 408
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIK 325
+ G+ + L GH V + + +GA+D K + E L+ + N++
Sbjct: 409 DIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGHTNRVY 467
Query: 326 GNAPE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ +VSGS D ++ +W+ T +TGHQ L + + + + S + D +
Sbjct: 468 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQSLTSGMELKDN--ILVSGNADST 524
Query: 384 IKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNF 422
+K+W+ TG+ + +G +Q + C ++ NF
Sbjct: 525 VKIWDIKTGQCLQTLQGP--SKHQ---SAVTCLQFNKNF 558
Score = 192 (72.6 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 65/237 (27%), Positives = 114/237 (48%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTE 292
L GH +TC+++ G+ ++ +GS D T+KVW GK +R L GH G W + + +
Sbjct: 298 LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR---D 353
Query: 293 YALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PERLVSGSDDFTMFLWEPAVS 349
+ +G+ D T K +++ E + ++ +R+VSGS D T+ +W+
Sbjct: 354 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG 413
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ M GH V V + DG+ V S ++D +K+W+ T + +GH VY ++
Sbjct: 414 QCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 470
Query: 410 FELIYC--------FRY--PSNFYCVVDMSCCMSLYS-WSADSRLLLSGSKDSTLKV 455
F+ I+ R C+ ++ SL S +L+SG+ DST+K+
Sbjct: 471 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKI 527
Score = 37 (18.1 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 234 ICLSGHTLAVTCVKW 248
+C+ L ++CV W
Sbjct: 3 VCVLSSVLVLSCVCW 17
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 274 (101.5 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 93/326 (28%), Positives = 145/326 (44%)
Query: 79 EKVLSIVYQPQAVFRIRPVN-----RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVR 133
+K S++ +P A R +P + I+GH V S+A P+ ASG+GD T++
Sbjct: 110 DKPTSLIQRPSAT-RQQPPEWHAPWKLMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIK 168
Query: 134 LWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK 193
+W+L T TGH + V +A S +L S + ++CWD +T K + GH
Sbjct: 169 IWNLATGALRLTLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRH-YHGHL 227
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDG 252
+ ++ P L+ V+ +DG AR+WD+ R + LSGHT V V+ D
Sbjct: 228 SGVYTLALHP-RLDL----LVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADP 282
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
+ TGS D T+++W+ GK + L H + SLA A + KQ+ P
Sbjct: 283 QVITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLATHPREFTFASASTGSIKQWKCPGG 342
Query: 313 MKKAALERYNKIKG----NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQ--QL---- 362
E +N I N L SG D+ +M W+ + +T T Q L
Sbjct: 343 EFMQNFEGHNAIINTLSVNEDNVLFSGGDNGSMSFWDWKTGYRYQTIDTTAQPGSLEAEA 402
Query: 363 -VNHVYFSPDGQWVASASFDKSIKLW 387
+ F G + + DK+IK+W
Sbjct: 403 GIMTSTFDRTGLRLITGEADKTIKVW 428
Score = 192 (72.6 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 64/265 (24%), Positives = 119/265 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH V +A SP L S D V+ WDL T + GH + V +A
Sbjct: 180 TLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRL 239
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+G + G + WD +T + + + LSGH + + + P + ++ S D
Sbjct: 240 DLLVTGGRDGVARVWDMRT-RSNIHVLSGHTGTVADVQCQEAD---P--QVITGSLDATV 293
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
R+WD++ K + L+ H + + + + +IK W+ G+ ++ +GH
Sbjct: 294 RLWDLAAGKTMGVLTHHKKGIRSLATHPREFTFASASTGSIKQWKCPGGEFMQNFEGHNA 353
Query: 283 WVNSLALSTEYALRTGA-------FD-HTGKQYSSPEEMKK-AALERYNKIKGNAPER-- 331
+N+L+++ + L +G +D TG +Y + + + +LE I + +R
Sbjct: 354 IINTLSVNEDNVLFSGGDNGSMSFWDWKTGYRYQTIDTTAQPGSLEAEAGIMTSTFDRTG 413
Query: 332 --LVSGSDDFTMFLWEPAVSKQPKT 354
L++G D T+ +W+ P+T
Sbjct: 414 LRLITGEADKTIKVWKQDDQATPET 438
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 57/220 (25%), Positives = 95/220 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ ++ EP + F S + D +IW+++ + L+GH V +
Sbjct: 139 ISGHLGWVRSLAVEPNN-----EWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAV 193
Query: 249 GG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V +LAL L TG D +
Sbjct: 194 SPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARV 253
Query: 307 YSSPEEMKKAALERYNKIKGN-----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ L + + A ++++GS D T+ LW+ A K +T H++
Sbjct: 254 WDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGV-LTHHKK 312
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
+ + P ASAS SIK W G+F+ F GH
Sbjct: 313 GIRSLATHPREFTFASASTG-SIKQWKCPGGEFMQNFEGH 351
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 277 (102.6 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 82/300 (27%), Positives = 149/300 (49%)
Query: 104 IAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GH + V++ + F G ++ SGS D T+++W T + GH V WS+
Sbjct: 298 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 351
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS S+D
Sbjct: 352 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVSGSRDA 403
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ + L+GH
Sbjct: 404 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 462
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---LVSGSD 337
+ V SL + + +G+ D + + + L + + + LVSG+
Sbjct: 463 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 521
Query: 338 DFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
D T+ +W+ + +T + HQ V + F+ + +V ++S D ++KLW+ TG+F+
Sbjct: 522 DSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFI 579
Score = 254 (94.5 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 63/182 (34%), Positives = 98/182 (53%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C + GH AV V + DGR++ SG+ D V++WD T+T + GH N V + +
Sbjct: 414 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 471
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG H+VSGS ++ WD +TG + L+GH+ +G+ + L VS +
Sbjct: 472 --DGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQSLTSGMELKDNIL-------VSGNA 521
Query: 219 DGDARIWDVSLRKCVICLSG---HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
D +IWD+ +C+ L G H AVTC+++ + VI T S D T+K+W+ G+ IR
Sbjct: 522 DSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVI-TSSDDGTVKLWDLKTGEFIR 580
Query: 276 EL 277
L
Sbjct: 581 NL 582
Score = 229 (85.7 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 71/253 (28%), Positives = 117/253 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT V S + + SGS D T+++W+ T + GH + V C+
Sbjct: 334 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-- 389
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K +VSGS+ L+ WD +TG+ + L GH + + ++ RR VS +
Sbjct: 390 HLHEKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQYDG-------RRVVSGAY 441
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D ++WD C+ L GHT V +++ G V+ +GS D +I+VW+ G I L
Sbjct: 442 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLT 500
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP------ERL 332
GH + + L + L +G D T K + L+ +K + +
Sbjct: 501 GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFV 559
Query: 333 VSGSDDFTMFLWE 345
++ SDD T+ LW+
Sbjct: 560 ITSSDDGTVKLWD 572
Score = 220 (82.5 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 73/279 (26%), Positives = 127/279 (45%)
Query: 148 GHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
GH + V+ C+ + G +VSGS L+ W TGK L GH TG W
Sbjct: 300 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-RTLVGH----TGGVWSSQMR 352
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVW 266
+ +S S D ++W+ +C+ L GHT V C+ V+ +GS+D T++VW
Sbjct: 353 D---NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVW 408
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIK 325
+ G+ + L GH V + + +GA+D K + E L+ + N++
Sbjct: 409 DIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGHTNRVY 467
Query: 326 GNAPE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ +VSGS D ++ +W+ T +TGHQ L + + + + S + D +
Sbjct: 468 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQSLTSGMELKDN--ILVSGNADST 524
Query: 384 IKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNF 422
+K+W+ TG+ + +G +Q + C ++ NF
Sbjct: 525 VKIWDIKTGQCLQTLQGP--SKHQ---SAVTCLQFNKNF 558
Score = 192 (72.6 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 65/237 (27%), Positives = 114/237 (48%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTE 292
L GH +TC+++ G+ ++ +GS D T+KVW GK +R L GH G W + + +
Sbjct: 298 LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR---D 353
Query: 293 YALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PERLVSGSDDFTMFLWEPAVS 349
+ +G+ D T K +++ E + ++ +R+VSGS D T+ +W+
Sbjct: 354 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG 413
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ M GH V V + DG+ V S ++D +K+W+ T + +GH VY ++
Sbjct: 414 QCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 470
Query: 410 FELIYC--------FRY--PSNFYCVVDMSCCMSLYS-WSADSRLLLSGSKDSTLKV 455
F+ I+ R C+ ++ SL S +L+SG+ DST+K+
Sbjct: 471 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKI 527
Score = 38 (18.4 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 234 ICLSGHTLAVTCVKW 248
+C+ L ++CV W
Sbjct: 3 VCVPSSVLVLSCVCW 17
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 233 (87.1 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 68/224 (30%), Positives = 105/224 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP--VH---LNA------ 208
DG + S S ++ W T K L H+ + ISW P H L A
Sbjct: 244 QDGTLIASSSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESAHPTILEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV--TCVKWGGDGVIYTGSQDCT 262
P +S S+D ++WDVS+ C++ L GH V V GG ++ + + D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIV-SCADDKT 361
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+++W+ + + L H H+V SL T + TG+ D T K
Sbjct: 362 LRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 232 (86.7 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 60/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ TG +GH++W+ + P N S+S D
Sbjct: 205 DHIVSASRDKTIKMWEVATGY-CVKTFTGHREWVRMV--RP---NQDGTLIASSSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSIGMCLMTLVGHDNWVRGV 344
Score = 203 (76.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 60/189 (31%), Positives = 85/189 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 ADGKH--------------------LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ H L+SGS+ ++ WD G L GH W+ G+
Sbjct: 286 PESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
VH + VS + D RIWD ++C LS H VT + + + TGS
Sbjct: 345 L---VHPGG--KYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 201 (75.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 61/204 (29%), Positives = 95/204 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+V+ CV +GH V V+ DG +I + S D T++VW + EL+ H H
Sbjct: 218 MWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTEYALRTGAFDHTGKQ 306
V ++ + E A T + TG +
Sbjct: 278 VVECISWAPESAHPT-ILEATGSE 300
Score = 177 (67.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 68/229 (29%), Positives = 105/229 (45%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + VI + S+D TIKVW+ G R LKGH V ++ T
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE A
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVA 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS+S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
++ C + P + + + + LLSGS+D T+K+
Sbjct: 277 ---HVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKM 322
Score = 159 (61.0 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 55/202 (27%), Positives = 94/202 (46%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVIVSASEDATIKVWDHETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLV-SGSDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L+ S S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPD 371
K+ K + H+ +V + ++P+
Sbjct: 266 KECKAELREHEHVVECISWAPE 287
Score = 157 (60.3 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 46/184 (25%), Positives = 84/184 (45%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HTG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L + + D T + + + KA L
Sbjct: 215 TIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
Score = 126 (49.4 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 46/179 (25%), Positives = 77/179 (43%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL 273
VSAS+D ++W+V+ CV +GH V V+ DG + S + +
Sbjct: 208 VSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSN----------DQT 257
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYN---KIKGNAP 329
+R WV + E +H + S +PE LE K G
Sbjct: 258 VRV------WV---VATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPG 308
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
L+SGS D T+ +W+ ++ T + GH V V P G+++ S + DK++++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSIGMCLMT-LVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWD 366
Score = 82 (33.9 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
+VS +DD T+ +W+ + KT ++ H+ V + F +V + S D+++K+W
Sbjct: 353 IVSCADDKTLRIWDYKNKRCTKT-LSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 57 (25.1 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
G ++ S S DK+IK+W+ + G + GH
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGMCLMTLVGH 337
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 276 (102.2 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 82/300 (27%), Positives = 148/300 (49%)
Query: 104 IAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GH + V++ + F G ++ SGS D T+++W T + GH V WS+
Sbjct: 256 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 309
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS S+D
Sbjct: 310 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVSGSRDA 361
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ + L+GH
Sbjct: 362 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 420
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---LVSGSD 337
+ V SL + + +G+ D + + + L + + + LVSG+
Sbjct: 421 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 479
Query: 338 DFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
D T+ +W+ + +T HQ V + F+ + +V ++S D ++KLW+ TG+F+
Sbjct: 480 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFI 537
Score = 254 (94.5 bits), Expect = 7.2e-19, P = 7.2e-19
Identities = 63/182 (34%), Positives = 98/182 (53%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C + GH AV V + DGR++ SG+ D V++WD T+T + GH N V + +
Sbjct: 372 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 429
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG H+VSGS ++ WD +TG + L+GH+ +G+ + L VS +
Sbjct: 430 --DGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQSLTSGMELKDNIL-------VSGNA 479
Query: 219 DGDARIWDVSLRKCVICLSG---HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
D +IWD+ +C+ L G H AVTC+++ + VI T S D T+K+W+ G+ IR
Sbjct: 480 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI-TSSDDGTVKLWDLKTGEFIR 538
Query: 276 EL 277
L
Sbjct: 539 NL 540
Score = 234 (87.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 72/253 (28%), Positives = 117/253 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT V S + + SGS D T+++W+ T + GH + V C+
Sbjct: 292 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-- 347
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K +VSGS+ L+ WD +TG+ + L GH + + ++ RR VS +
Sbjct: 348 HLHEKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQYDG-------RRVVSGAY 399
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D ++WD C+ L GHT V +++ G V+ +GS D +I+VW+ G I L
Sbjct: 400 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLT 458
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP------ERL 332
GH + + L + L +G D T K + L+ NK + +
Sbjct: 459 GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV 517
Query: 333 VSGSDDFTMFLWE 345
++ SDD T+ LW+
Sbjct: 518 ITSSDDGTVKLWD 530
Score = 219 (82.2 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 69/257 (26%), Positives = 119/257 (46%)
Query: 148 GHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
GH + V+ C+ + G +VSGS L+ W TGK L GH TG W
Sbjct: 258 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-RTLVGH----TGGVWSSQMR 310
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVW 266
+ +S S D ++W+ +C+ L GHT V C+ V+ +GS+D T++VW
Sbjct: 311 D---NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVW 366
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIK 325
+ G+ + L GH V + + +GA+D K + E L+ + N++
Sbjct: 367 DIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGHTNRVY 425
Query: 326 GNAPE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ +VSGS D ++ +W+ T +TGHQ L + + + + S + D +
Sbjct: 426 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQSLTSGMELKDN--ILVSGNADST 482
Query: 384 IKLWNGTTGKFVAVFRG 400
+K+W+ TG+ + +G
Sbjct: 483 VKIWDIKTGQCLQTLQG 499
Score = 192 (72.6 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 65/237 (27%), Positives = 114/237 (48%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTE 292
L GH +TC+++ G+ ++ +GS D T+KVW GK +R L GH G W + + +
Sbjct: 256 LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR---D 311
Query: 293 YALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PERLVSGSDDFTMFLWEPAVS 349
+ +G+ D T K +++ E + ++ +R+VSGS D T+ +W+
Sbjct: 312 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG 371
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ M GH V V + DG+ V S ++D +K+W+ T + +GH VY ++
Sbjct: 372 QCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 428
Query: 410 FELIYC--------FRY--PSNFYCVVDMSCCMSLYS-WSADSRLLLSGSKDSTLKV 455
F+ I+ R C+ ++ SL S +L+SG+ DST+K+
Sbjct: 429 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKI 485
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 276 (102.2 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 82/300 (27%), Positives = 148/300 (49%)
Query: 104 IAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GH + V++ + F G ++ SGS D T+++W T + GH V WS+
Sbjct: 296 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 349
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS S+D
Sbjct: 350 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVSGSRDA 401
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ + L+GH
Sbjct: 402 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 460
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---LVSGSD 337
+ V SL + + +G+ D + + + L + + + LVSG+
Sbjct: 461 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 519
Query: 338 DFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
D T+ +W+ + +T HQ V + F+ + +V ++S D ++KLW+ TG+F+
Sbjct: 520 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFI 577
Score = 254 (94.5 bits), Expect = 8.4e-19, P = 8.4e-19
Identities = 63/182 (34%), Positives = 98/182 (53%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C + GH AV V + DGR++ SG+ D V++WD T+T + GH N V + +
Sbjct: 412 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 469
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG H+VSGS ++ WD +TG + L+GH+ +G+ + L VS +
Sbjct: 470 --DGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQSLTSGMELKDNIL-------VSGNA 519
Query: 219 DGDARIWDVSLRKCVICLSG---HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
D +IWD+ +C+ L G H AVTC+++ + VI T S D T+K+W+ G+ IR
Sbjct: 520 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI-TSSDDGTVKLWDLKTGEFIR 578
Query: 276 EL 277
L
Sbjct: 579 NL 580
Score = 234 (87.4 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 72/253 (28%), Positives = 117/253 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT V S + + SGS D T+++W+ T + GH + V C+
Sbjct: 332 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-- 387
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K +VSGS+ L+ WD +TG+ + L GH + + ++ RR VS +
Sbjct: 388 HLHEKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQYDG-------RRVVSGAY 439
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D ++WD C+ L GHT V +++ G V+ +GS D +I+VW+ G I L
Sbjct: 440 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLT 498
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP------ERL 332
GH + + L + L +G D T K + L+ NK + +
Sbjct: 499 GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV 557
Query: 333 VSGSDDFTMFLWE 345
++ SDD T+ LW+
Sbjct: 558 ITSSDDGTVKLWD 570
Score = 219 (82.2 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 69/257 (26%), Positives = 119/257 (46%)
Query: 148 GHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
GH + V+ C+ + G +VSGS L+ W TGK L GH TG W
Sbjct: 298 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-RTLVGH----TGGVWSSQMR 350
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVW 266
+ +S S D ++W+ +C+ L GHT V C+ V+ +GS+D T++VW
Sbjct: 351 D---NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVW 406
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIK 325
+ G+ + L GH V + + +GA+D K + E L+ + N++
Sbjct: 407 DIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGHTNRVY 465
Query: 326 GNAPE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ +VSGS D ++ +W+ T +TGHQ L + + + + S + D +
Sbjct: 466 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQSLTSGMELKDN--ILVSGNADST 522
Query: 384 IKLWNGTTGKFVAVFRG 400
+K+W+ TG+ + +G
Sbjct: 523 VKIWDIKTGQCLQTLQG 539
Score = 192 (72.6 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 65/237 (27%), Positives = 114/237 (48%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTE 292
L GH +TC+++ G+ ++ +GS D T+KVW GK +R L GH G W + + +
Sbjct: 296 LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR---D 351
Query: 293 YALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PERLVSGSDDFTMFLWEPAVS 349
+ +G+ D T K +++ E + ++ +R+VSGS D T+ +W+
Sbjct: 352 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG 411
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ M GH V V + DG+ V S ++D +K+W+ T + +GH VY ++
Sbjct: 412 QCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 468
Query: 410 FELIYC--------FRY--PSNFYCVVDMSCCMSLYS-WSADSRLLLSGSKDSTLKV 455
F+ I+ R C+ ++ SL S +L+SG+ DST+K+
Sbjct: 469 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKI 525
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 254 (94.5 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 62/196 (31%), Positives = 98/196 (50%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 20 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 79
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 80 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 132
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 133 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 192
Query: 281 GHWVNSLALS-TEYAL 295
VN + EY L
Sbjct: 193 TGPVNVVEFHPNEYLL 208
Score = 204 (76.9 bits), Expect = 9.6e-16, P = 9.6e-16
Identities = 58/166 (34%), Positives = 79/166 (47%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 39 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 97
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 98 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 155
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + F
Sbjct: 156 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 201
Score = 165 (63.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 34/101 (33%), Positives = 52/101 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 104 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 163
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
K L S + ++ WD GK GH + + + P
Sbjct: 164 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHP 203
Score = 138 (53.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 37/149 (24%), Positives = 68/149 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C ++ GHT V SV + + +GS ++R+WDL + GHK + + +
Sbjct: 59 CIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFH 118
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
G+ + SGS+ ++ WD + K GH + + + + P + SA+ D
Sbjct: 119 PYGEFVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSP-----DGKWLASAADD 172
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKW 248
++WD++ K + GHT V V++
Sbjct: 173 HTVKLWDLTAGKMMSEFPGHTGPVNVVEF 201
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 277 (102.6 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 75/220 (34%), Positives = 112/220 (50%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH+ V S +FSPD + L SGS D TVRLW ++T T + GH + V +++S G
Sbjct: 520 TLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLG 579
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ + S + W P +GH + +S+ P N C F +S D
Sbjct: 580 HYFATASHDQTARLWSCDHIYPL-RIFAGHLNDVDCVSFHP---NG-CYVFTGSS-DKTC 633
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
R+WDVS V GHT V + DG + TGS+D I VW+ GK +++++GHG
Sbjct: 634 RMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHG 693
Query: 282 -HWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALE 319
+ + SL+ S E L +G DHT + + ++KKA E
Sbjct: 694 KNAIYSLSYSKEGNVLISGGADHTVRVW----DLKKATTE 729
Score = 154 (59.3 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 49/184 (26%), Positives = 83/184 (45%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST-EY 293
L GH+ V + D + +GS+D T+++W + KGH H V ++ S +
Sbjct: 521 LVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGH 580
Query: 294 ALRTGAFDHTGKQYSS----PEEMKKAALERYNKIKGNAPERLV-SGSDDFTMFLWEPAV 348
T + D T + +S P + L + + + V +GS D T +W+ V
Sbjct: 581 YFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWD--V 638
Query: 349 SKQPKTRM-TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH-VGPVY 406
S R+ GH V + PDG+W+++ S D I +W+ TGK + RGH +Y
Sbjct: 639 STGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIY 698
Query: 407 QIRF 410
+ +
Sbjct: 699 SLSY 702
Score = 137 (53.3 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 57/240 (23%), Positives = 104/240 (43%)
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
WS DG L + + A L D P+ L GH + S+ P + + +S S
Sbjct: 493 WSLDGSSLNNPNIA--LNNNDKDED-PTCKTLVGHSGTVYSTSFSPDN-----KYLLSGS 544
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRE 276
+D R+W + ++ GH V V + G + T S D T ++W +R
Sbjct: 545 EDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRI 604
Query: 277 LKGHGHWVNSLALSTE--YALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKGNA--PER 331
GH + V+ ++ Y TG+ D T + + S + + L + A P+
Sbjct: 605 FAGHLNDVDCVSFHPNGCYVF-TGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDG 663
Query: 332 --LVSGSDDFTMFLWEPAVSKQPKTRMTGH-QQLVNHVYFSPDGQWVASASFDKSIKLWN 388
L +GS+D + +W+ K+ K +M GH + + + +S +G + S D ++++W+
Sbjct: 664 RWLSTGSEDGIINVWDIGTGKRLK-QMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWD 722
Score = 118 (46.6 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 40/140 (28%), Positives = 63/140 (45%)
Query: 275 RELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN---AP- 329
+ L GH V S + S + L +G+ D T + +S + + +N + +P
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 330 -ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+ S D T LW P GH V+ V F P+G +V + S DK+ ++W+
Sbjct: 579 GHYFATASHDQTARLWS-CDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWD 637
Query: 389 GTTGKFVAVFRGHVGPVYQI 408
+TG V +F GH PV I
Sbjct: 638 VSTGDSVRLFLGHTAPVISI 657
Score = 109 (43.4 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 35/114 (30%), Positives = 53/114 (46%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L+SGS+D T+ LW + GH V V FSP G + A+AS D++ +LW+
Sbjct: 540 LLSGSEDKTVRLWSMD-THTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDH 598
Query: 392 GKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ +F GH+ V + F C+ + + D +C M S RL L
Sbjct: 599 IYPLRIFAGHLNDVDCVSFHPNGCYVFTGSS----DKTCRMWDVSTGDSVRLFL 648
Score = 107 (42.7 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
KT + GH V FSPD +++ S S DK+++LW+ T + ++GH PV+ + F
Sbjct: 519 KT-LVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSF 575
Score = 57 (25.1 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 27/122 (22%), Positives = 49/122 (40%)
Query: 29 FPQNAGPQQLSQIVNKLLNNEEKLPYAFYIS----DHELLVPLGSYLE-KHKVSVEKVLS 83
F N G +I +K+ +EEK + D L P L K +++ L
Sbjct: 375 FKDNTGDDDKDKIKDKIAKDEEKKESELKVDGEKKDSNLSSPARDILPLPPKTALDLKLE 434
Query: 84 I--VYQPQAVFRIRPVNR-----CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
I V + + ++ + C T + + + FS D R A+G D+ +++W
Sbjct: 435 IQKVKESRDAIKLDNLQLALPSVCMYTFQNTNKDMSCLDFSDDCRIAAAGFQDSYIKIWS 494
Query: 137 LN 138
L+
Sbjct: 495 LD 496
Score = 44 (20.5 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
S+S + +L+SG D T++V
Sbjct: 701 SYSKEGNVLISGGADHTVRV 720
Score = 43 (20.2 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 232 CVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVW 266
C+ ++C+ + D + G QD IK+W
Sbjct: 458 CMYTFQNTNKDMSCLDFSDDCRIAAAGFQDSYIKIW 493
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 276 (102.2 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 82/300 (27%), Positives = 148/300 (49%)
Query: 104 IAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GH + V++ + F G ++ SGS D T+++W T + GH V WS+
Sbjct: 376 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 429
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS S+D
Sbjct: 430 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVSGSRDA 481
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ + L+GH
Sbjct: 482 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 540
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---LVSGSD 337
+ V SL + + +G+ D + + + L + + + LVSG+
Sbjct: 541 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 599
Query: 338 DFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
D T+ +W+ + +T HQ V + F+ + +V ++S D ++KLW+ TG+F+
Sbjct: 600 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFI 657
Score = 254 (94.5 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 63/182 (34%), Positives = 98/182 (53%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C + GH AV V + DGR++ SG+ D V++WD T+T + GH N V + +
Sbjct: 492 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 549
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG H+VSGS ++ WD +TG + L+GH+ +G+ + L VS +
Sbjct: 550 --DGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQSLTSGMELKDNIL-------VSGNA 599
Query: 219 DGDARIWDVSLRKCVICLSG---HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
D +IWD+ +C+ L G H AVTC+++ + VI T S D T+K+W+ G+ IR
Sbjct: 600 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI-TSSDDGTVKLWDLKTGEFIR 658
Query: 276 EL 277
L
Sbjct: 659 NL 660
Score = 234 (87.4 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 72/253 (28%), Positives = 117/253 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT V S + + SGS D T+++W+ T + GH + V C+
Sbjct: 412 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-- 467
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K +VSGS+ L+ WD +TG+ + L GH + + ++ RR VS +
Sbjct: 468 HLHEKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQYDG-------RRVVSGAY 519
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D ++WD C+ L GHT V +++ G V+ +GS D +I+VW+ G I L
Sbjct: 520 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLT 578
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP------ERL 332
GH + + L + L +G D T K + L+ NK + +
Sbjct: 579 GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV 637
Query: 333 VSGSDDFTMFLWE 345
++ SDD T+ LW+
Sbjct: 638 ITSSDDGTVKLWD 650
Score = 219 (82.2 bits), Expect = 9.0e-15, P = 9.0e-15
Identities = 69/257 (26%), Positives = 119/257 (46%)
Query: 148 GHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
GH + V+ C+ + G +VSGS L+ W TGK L GH TG W
Sbjct: 378 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-RTLVGH----TGGVWSSQMR 430
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVW 266
+ +S S D ++W+ +C+ L GHT V C+ V+ +GS+D T++VW
Sbjct: 431 D---NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVW 486
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIK 325
+ G+ + L GH V + + +GA+D K + E L+ + N++
Sbjct: 487 DIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGHTNRVY 545
Query: 326 GNAPE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ +VSGS D ++ +W+ T +TGHQ L + + + + S + D +
Sbjct: 546 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQSLTSGMELKDN--ILVSGNADST 602
Query: 384 IKLWNGTTGKFVAVFRG 400
+K+W+ TG+ + +G
Sbjct: 603 VKIWDIKTGQCLQTLQG 619
Score = 192 (72.6 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 65/237 (27%), Positives = 114/237 (48%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTE 292
L GH +TC+++ G+ ++ +GS D T+KVW GK +R L GH G W + + +
Sbjct: 376 LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR---D 431
Query: 293 YALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PERLVSGSDDFTMFLWEPAVS 349
+ +G+ D T K +++ E + ++ +R+VSGS D T+ +W+
Sbjct: 432 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG 491
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ M GH V V + DG+ V S ++D +K+W+ T + +GH VY ++
Sbjct: 492 QCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 548
Query: 410 FELIYC--------FRY--PSNFYCVVDMSCCMSLYS-WSADSRLLLSGSKDSTLKV 455
F+ I+ R C+ ++ SL S +L+SG+ DST+K+
Sbjct: 549 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKI 605
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 276 (102.2 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 82/300 (27%), Positives = 148/300 (49%)
Query: 104 IAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GH + V++ + F G ++ SGS D T+++W T + GH V WS+
Sbjct: 381 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 434
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS S+D
Sbjct: 435 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVSGSRDA 486
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ + L+GH
Sbjct: 487 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 545
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---LVSGSD 337
+ V SL + + +G+ D + + + L + + + LVSG+
Sbjct: 546 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 604
Query: 338 DFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
D T+ +W+ + +T HQ V + F+ + +V ++S D ++KLW+ TG+F+
Sbjct: 605 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFI 662
Score = 254 (94.5 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 63/182 (34%), Positives = 98/182 (53%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C + GH AV V + DGR++ SG+ D V++WD T+T + GH N V + +
Sbjct: 497 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 554
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG H+VSGS ++ WD +TG + L+GH+ +G+ + L VS +
Sbjct: 555 --DGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQSLTSGMELKDNIL-------VSGNA 604
Query: 219 DGDARIWDVSLRKCVICLSG---HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
D +IWD+ +C+ L G H AVTC+++ + VI T S D T+K+W+ G+ IR
Sbjct: 605 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI-TSSDDGTVKLWDLKTGEFIR 663
Query: 276 EL 277
L
Sbjct: 664 NL 665
Score = 234 (87.4 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 72/253 (28%), Positives = 117/253 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT V S + + SGS D T+++W+ T + GH + V C+
Sbjct: 417 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-- 472
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K +VSGS+ L+ WD +TG+ + L GH + + ++ RR VS +
Sbjct: 473 HLHEKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQYDG-------RRVVSGAY 524
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D ++WD C+ L GHT V +++ G V+ +GS D +I+VW+ G I L
Sbjct: 525 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLT 583
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP------ERL 332
GH + + L + L +G D T K + L+ NK + +
Sbjct: 584 GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV 642
Query: 333 VSGSDDFTMFLWE 345
++ SDD T+ LW+
Sbjct: 643 ITSSDDGTVKLWD 655
Score = 219 (82.2 bits), Expect = 9.1e-15, P = 9.1e-15
Identities = 69/257 (26%), Positives = 119/257 (46%)
Query: 148 GHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
GH + V+ C+ + G +VSGS L+ W TGK L GH TG W
Sbjct: 383 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-RTLVGH----TGGVWSSQMR 435
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVW 266
+ +S S D ++W+ +C+ L GHT V C+ V+ +GS+D T++VW
Sbjct: 436 D---NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVW 491
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIK 325
+ G+ + L GH V + + +GA+D K + E L+ + N++
Sbjct: 492 DIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGHTNRVY 550
Query: 326 GNAPE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ +VSGS D ++ +W+ T +TGHQ L + + + + S + D +
Sbjct: 551 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQSLTSGMELKDN--ILVSGNADST 607
Query: 384 IKLWNGTTGKFVAVFRG 400
+K+W+ TG+ + +G
Sbjct: 608 VKIWDIKTGQCLQTLQG 624
Score = 192 (72.6 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 65/237 (27%), Positives = 114/237 (48%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTE 292
L GH +TC+++ G+ ++ +GS D T+KVW GK +R L GH G W + + +
Sbjct: 381 LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR---D 436
Query: 293 YALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PERLVSGSDDFTMFLWEPAVS 349
+ +G+ D T K +++ E + ++ +R+VSGS D T+ +W+
Sbjct: 437 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG 496
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ M GH V V + DG+ V S ++D +K+W+ T + +GH VY ++
Sbjct: 497 QCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 553
Query: 410 FELIYC--------FRY--PSNFYCVVDMSCCMSLYS-WSADSRLLLSGSKDSTLKV 455
F+ I+ R C+ ++ SL S +L+SG+ DST+K+
Sbjct: 554 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKI 610
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 276 (102.2 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 83/301 (27%), Positives = 150/301 (49%)
Query: 104 IAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GH + V++ + F G ++ SGS D T+++W T + GH V WS+
Sbjct: 429 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 482
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS S+D
Sbjct: 483 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVSGSRDA 534
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ + L+GH
Sbjct: 535 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 593
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---LVSGSD 337
+ V SL + + +G+ D + + + L + + + LVSG+
Sbjct: 594 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 652
Query: 338 DFTMFLWEPAVSKQPKTRMTG---HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
D T+ +W+ + +T + G HQ V + F+ + +V ++S D ++KLW+ TG+F
Sbjct: 653 DSTVKIWDIKTGQCLQT-LQGPHKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLRTGEF 709
Query: 395 V 395
+
Sbjct: 710 I 710
Score = 254 (94.5 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 63/182 (34%), Positives = 98/182 (53%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C + GH AV V + DGR++ SG+ D V++WD T+T + GH N V + +
Sbjct: 545 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 602
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG H+VSGS ++ WD +TG + L+GH+ +G+ + L VS +
Sbjct: 603 --DGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQSLTSGMELKDNIL-------VSGNA 652
Query: 219 DGDARIWDVSLRKCVICLSG---HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
D +IWD+ +C+ L G H AVTC+++ + VI T S D T+K+W+ G+ IR
Sbjct: 653 DSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVI-TSSDDGTVKLWDLRTGEFIR 711
Query: 276 EL 277
L
Sbjct: 712 NL 713
Score = 229 (85.7 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 71/253 (28%), Positives = 117/253 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT V S + + SGS D T+++W+ T + GH + V C+
Sbjct: 465 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-- 520
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K +VSGS+ L+ WD +TG+ + L GH + + ++ RR VS +
Sbjct: 521 HLHEKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQYDG-------RRVVSGAY 572
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D ++WD C+ L GHT V +++ G V+ +GS D +I+VW+ G I L
Sbjct: 573 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLT 631
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP------ERL 332
GH + + L + L +G D T K + L+ +K + +
Sbjct: 632 GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFV 690
Query: 333 VSGSDDFTMFLWE 345
++ SDD T+ LW+
Sbjct: 691 ITSSDDGTVKLWD 703
Score = 224 (83.9 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 79/299 (26%), Positives = 135/299 (45%)
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGN 187
DT R DL + + GH + V+ C+ + G +VSGS L+ W TGK
Sbjct: 415 DTNWRRGDLKSPKVL---KGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-R 468
Query: 188 PLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVK 247
L GH TG W + +S S D ++W+ +C+ L GHT V C+
Sbjct: 469 TLVGH----TGGVWSSQMRD---NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH 521
Query: 248 WGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY 307
V+ +GS+D T++VW+ G+ + L GH V + + +GA+D K +
Sbjct: 522 LHEKRVV-SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVW 579
Query: 308 SSPEEMKKAALERY-NKIKGNAPE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
E L+ + N++ + +VSGS D ++ +W+ T +TGHQ L +
Sbjct: 580 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQSLTS 638
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG-HVGPVYQIRFELIYCFRYPSNF 422
+ + + S + D ++K+W+ TG+ + +G H +Q + C ++ NF
Sbjct: 639 GMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPHK---HQ---SAVTCLQFNKNF 689
Score = 192 (72.6 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 65/237 (27%), Positives = 114/237 (48%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTE 292
L GH +TC+++ G+ ++ +GS D T+KVW GK +R L GH G W + + +
Sbjct: 429 LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR---D 484
Query: 293 YALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PERLVSGSDDFTMFLWEPAVS 349
+ +G+ D T K +++ E + ++ +R+VSGS D T+ +W+
Sbjct: 485 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG 544
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ M GH V V + DG+ V S ++D +K+W+ T + +GH VY ++
Sbjct: 545 QCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 601
Query: 410 FELIYC--------FRY--PSNFYCVVDMSCCMSLYS-WSADSRLLLSGSKDSTLKV 455
F+ I+ R C+ ++ SL S +L+SG+ DST+K+
Sbjct: 602 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKI 658
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 272 (100.8 bits), Expect = 4.3e-21, P = 4.3e-21
Identities = 76/249 (30%), Positives = 120/249 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V S+A P + +GS D T+++WDL + TGH + V +A S
Sbjct: 204 ISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSP 263
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + + P ++ V+ S+D AR
Sbjct: 264 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYDLDLHPT-IDV----LVTCSRDATAR 317
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
+WD+ + V LSGHT V VK V+ GS D TI++W+ GK L H
Sbjct: 318 VWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHK 377
Query: 282 HWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGS 336
V +L L +Y +G+ D+ KQ+ P+ L +N I N+ LVSG+
Sbjct: 378 KSVRALVLHPRQYTFASGSPDNI-KQWKFPDGNFIQNLSGHNAIINTLAVNSDGVLVSGA 436
Query: 337 DDFTMFLWE 345
D+ T+ +W+
Sbjct: 437 DNGTIHMWD 445
Score = 186 (70.5 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 62/221 (28%), Positives = 96/221 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 204 ISGHLGWVRSIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAV 258
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 259 SNRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARV 318
Query: 307 YSSPEEMKKAALERYN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQ 360
+ + L + K + P+ + GS D T+ LW+ K T +T H+
Sbjct: 319 WDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRAT-LTNHK 377
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
+ V + P AS S D +IK W G F+ GH
Sbjct: 378 KSVRALVLHPRQYTFASGSPD-NIKQWKFPDGNFIQNLSGH 417
Score = 175 (66.7 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 55/210 (26%), Positives = 91/210 (43%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI-AWSADGKH 164
GH AV + P L + S D T R+WD+ T+ + +GH N V + SA+ +
Sbjct: 290 GHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQV 349
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
+ GS ++ WD GK L+ HKK + + P F S S D + +
Sbjct: 350 VTVGSHDTTIRLWDLVAGKTRAT-LTNHKKSVRALVLHPRQYT-----FASGSPD-NIKQ 402
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
W + LSGH + + DGV+ +G+ + TI +W+ G + + H V
Sbjct: 403 WKFPDGNFIQNLSGHNAIINTLAVNSDGVLVSGADNGTIHMWDWRTGYNFQRI--HAA-V 459
Query: 285 NSLALSTEYALRTGAFDHTGKQYSSPEEMK 314
+L +E + + FD + + + E K
Sbjct: 460 QPGSLDSESGIFSCVFDQSESRLITAEADK 489
Score = 170 (64.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 66/256 (25%), Positives = 110/256 (42%)
Query: 147 TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
+GH WV IA + V+GS ++ WD +GK + L+GH + G++ V
Sbjct: 205 SGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLS-LTGHISTVRGVA---VSN 260
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKV 265
+P S +D + WD+ K + GH AV + V+ T S+D T +V
Sbjct: 261 RSPY--LFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARV 318
Query: 266 WETTQGKLIRELKGHGHWVNSLAL-STEYALRT-GAFDHTGKQYSSPEEMKKAALERYNK 323
W+ + L GH + V ++ S E + T G+ D T + + +A L + K
Sbjct: 319 WDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHKK 378
Query: 324 IKGNAPERLVSGSDDFTMFLWEPAVSKQPK-------TRMTGHQQLVNHVYFSPDGQWVA 376
+ LV +T P KQ K ++GH ++N + + DG V+
Sbjct: 379 ----SVRALVLHPRQYTFASGSPDNIKQWKFPDGNFIQNLSGHNAIINTLAVNSDGVLVS 434
Query: 377 SASFDKSIKLWNGTTG 392
A + +I +W+ TG
Sbjct: 435 GAD-NGTIHMWDWRTG 449
Score = 163 (62.4 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 56/202 (27%), Positives = 88/202 (43%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V VA S L S D V+ WDL + GH + V +
Sbjct: 245 SLTGHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTI 304
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K + + LSGH + + + +A + S D
Sbjct: 305 DVLVTCSRDATARVWDIRT-KANVHTLSGHTNTVATVKCQ----SAEPQVVTVGSHDTTI 359
Query: 223 RIWDVSLRKCVICLSGHTLAVTC-VKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K L+ H +V V +GS D IK W+ G I+ L GH
Sbjct: 360 RLWDLVAGKTRATLTNHKKSVRALVLHPRQYTFASGSPD-NIKQWKFPDGNFIQNLSGHN 418
Query: 282 HWVNSLALSTEYALRTGAFDHT 303
+N+LA++++ L +GA + T
Sbjct: 419 AIINTLAVNSDGVLVSGADNGT 440
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 272 (100.8 bits), Expect = 6.1e-21, P = 6.1e-21
Identities = 87/306 (28%), Positives = 143/306 (46%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALE------RY--NKIKGNAPER 331
VN + EY L +G+ D T + + + + +E RY + + G +P
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYAGSWVVGLSPPP 248
Query: 332 LVSG---------SDDFTMFLWEPAVSKQPK-TRMTGHQQLVNHVYFSPDGQWVASASFD 381
V G S + L+ + P R T H +L V F+PDG + S D
Sbjct: 249 KVVGCRYGAGVSRSHHRSCSLFPGLPTAFPDFLRPTPHSRLPRSVLFNPDGCCLYSGCQD 308
Query: 382 KSIKLW 387
S++++
Sbjct: 309 -SLRVY 313
Score = 204 (76.9 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 58/166 (34%), Positives = 79/166 (47%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + F
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Score = 191 (72.3 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 58/206 (28%), Positives = 97/206 (47%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETT 269
R + D +W ++ C++ L+GHT V V+ + +I GSQ +I+VW+
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 270 QGKLIRELKGHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEEMKKAALERYN----- 322
K++R L GH + SL E+ + +G+ D K + + +K + RY
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEF-VASGSQDTNIKLW---DIRRKGCVFRYRGHSQA 149
Query: 323 -KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ +P+ L S +DD T+ LW+ K + GH VN V F P+ +AS S
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 380 FDKSIKLWNGTTGKFVAVFRGHVGPV 405
D++I+ W+ + V+ G GPV
Sbjct: 209 SDRTIRFWDLEKFQVVSCIEGEPGPV 234
Score = 189 (71.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 43/136 (31%), Positives = 64/136 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S + ++ WD GK GH + + + P S S D
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHPNEY-----LLASGSSDRTI 213
Query: 223 RIWDVSLRKCVICLSG 238
R WD+ + V C+ G
Sbjct: 214 RFWDLEKFQVVSCIEG 229
Score = 146 (56.5 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 51/181 (28%), Positives = 81/181 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGSKAGELQCWDPQT--------GKPSGNPLSGHKKWITGISWEPVHLNAPCR 211
+ L SGS ++ WD + G+P P+ W+ G+S P +
Sbjct: 199 PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG--PVRYAGSWVVGLSPPPKVVGCRYG 256
Query: 212 RFVSASKDGDARIWD--VSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--W 266
VS S ++ + + + H+ V + DG +Y+G QD +++V W
Sbjct: 257 AGVSRSHHRSCSLFPGLPTAFPDFLRPTPHSRLPRSVLFNPDGCCLYSGCQD-SLRVYGW 315
Query: 267 E 267
E
Sbjct: 316 E 316
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 251 (93.4 bits), Expect = 6.4e-21, P = 6.4e-21
Identities = 80/269 (29%), Positives = 131/269 (48%)
Query: 49 EEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQ----AVFRIRPVNRCSA-- 102
++K P Y+ L+ G ++ VS E +I+ + V+++ P + S
Sbjct: 3 QQKAPQVTYLEVGSLVGHNG-FVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGK 61
Query: 103 ---TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN--TQTPMFKCTGHKNWVLCIA 157
++ GH+ V V S DG+ SGS D T+RLWD+ T +FK GH V+ +A
Sbjct: 62 AHRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFK--GHTQDVMSVA 119
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSG---HKKWITGISWEPVHLNAPCRRFV 214
+S+D + ++SGS+ ++ W+ G+ L G H+ W++ I + P N P V
Sbjct: 120 FSSDNRQIISGSRDATIKVWNT-LGECKFT-LEGPEAHQDWVSCIRFSP---NTPT--IV 172
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKL 273
S S D +IWD+ KC L+ HT V V DG + +G +D +WE + GK
Sbjct: 173 SGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKP 232
Query: 274 IRELKGHGHWVNSLALS-TEYALRTGAFD 301
+ +L+ + +N+LA S +Y L D
Sbjct: 233 LYKLEAR-NTINALAFSPNKYWLSAATDD 260
Score = 198 (74.8 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 83/321 (25%), Positives = 143/321 (44%)
Query: 148 GHKNWVLCIAWSADGKH-LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW--EPV 204
GH +V IA S + ++S S+ + W T + +P H+ + G S + V
Sbjct: 19 GHNGFVTSIAVSPENPDTIISSSRDKTVMVWQ-LTPTDATSPGKAHRS-LKGHSHFVQDV 76
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
++ + +S S D R+WD++ GHT V V + D I +GS+D TI
Sbjct: 77 VISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATI 136
Query: 264 KVWETTQGKLIRELKG---HGHWVNSLALSTEY-ALRTGAFDHTGKQYSSPEEMKKAALE 319
KVW T G+ L+G H WV+ + S + +G++D+ K + L
Sbjct: 137 KVWNTL-GECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLT 195
Query: 320 RY----NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQW 374
+ N + + L SG D LWE + K P ++ + +N + FSP+ W
Sbjct: 196 DHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGK-PLYKLEA-RNTINALAFSPNKYW 253
Query: 375 VASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSL 434
+++A+ DK I +W+ T + +A + P +++ + F C+SL
Sbjct: 254 LSAATDDKII-IWDLLTKQVLA----EIVP--EVKEQ---AFDSKKKKESKPKAPACLSL 303
Query: 435 YSWSADSRLLLSGSKDSTLKV 455
+WSAD +L +G D ++V
Sbjct: 304 -AWSADGSVLYAGYNDGLIRV 323
Score = 159 (61.0 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 57/225 (25%), Positives = 103/225 (45%)
Query: 236 LSGHTLAVTCVKWGGDG--VIYTGSQDCTIKVWE------TTQGKLIRELKGHGHWVNSL 287
L GH VT + + I + S+D T+ VW+ T+ GK R LKGH H+V +
Sbjct: 17 LVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDV 76
Query: 288 ALSTE--YALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPER-LVSGSDDFT 340
+S + +AL +G++D+T + + + + + + + + ++ R ++SGS D T
Sbjct: 77 VISHDGQFAL-SGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDAT 135
Query: 341 MFLWEPAVSKQPKTRMTG---HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
+ +W + K + G HQ V+ + FSP+ + S S+D +K+W+ + K
Sbjct: 136 IKVWNTL--GECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHT 193
Query: 398 FRGHVGPVYQIRFE---LIYCFRYPSNFYCVVDMSCCMSLYSWSA 439
H G V + + F C+ ++S LY A
Sbjct: 194 LTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEA 238
Score = 132 (51.5 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 55/198 (27%), Positives = 84/198 (42%)
Query: 97 VNRCSATIAG---HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC----TGH 149
+ C T+ G H + V + FSP+ + SGS D V++WD+ + FKC T H
Sbjct: 142 LGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKS----FKCNHTLTDH 197
Query: 150 KNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKP--------SGNPL--SGHKKWITG- 198
+V + S DG SG K W+ +GKP + N L S +K W++
Sbjct: 198 TGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNTINALAFSPNKYWLSAA 257
Query: 199 -----ISWEPVHLNAPCRRFVSASKDG-DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG 252
I W+ + + D++ S K CLS LA W DG
Sbjct: 258 TDDKIIIWDLLTKQVLAEIVPEVKEQAFDSKKKKESKPKAPACLS---LA-----WSADG 309
Query: 253 -VIYTGSQDCTIKVWETT 269
V+Y G D I+V++++
Sbjct: 310 SVLYAGYNDGLIRVYKSS 327
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 273 (101.2 bits), Expect = 6.8e-21, P = 6.8e-21
Identities = 92/330 (27%), Positives = 143/330 (43%)
Query: 99 RCSA-TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
RCS T GHT V+ + F + LA+GS DTT+++WD T + GH++ + C+
Sbjct: 339 RCSIKTFKGHTNGVMCLQF--EDNILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQ 396
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+ D L+SGS ++ W+ +TG+ +GH+ + G+ H +A S S
Sbjct: 397 F--DDTKLISGSMDRTIKVWNWRTGECIST-YTGHRGGVIGL-----HFDASI--LASGS 446
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRE 276
D +IW+ K L GHT V V+ +++ S DCT+++W+ IR
Sbjct: 447 VDKTVKIWNFE-DKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRT 505
Query: 277 LKGH-GHWVNSLALSTEYALR-------TGAFDHTGKQYSSPEEMKKAALE---RYNKIK 325
GH G + L E+ T P LE Y++
Sbjct: 506 FHGHVGQVQQVVPLPREFEFEEHDAECENDDLSTTSGDADPPSIQASMGLEPNAAYSQSS 565
Query: 326 --------GNA--PERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
G A P +V+ + D T+ LWE + +T GH + V + D +
Sbjct: 566 AFGTSFDNGRAAPPRYMVTSALDSTIRLWETTTGRCLRT-FFGHLEGVWAL--GADTLRI 622
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
S + D+ IK+W+ TGK F GH GPV
Sbjct: 623 VSGAEDRMIKIWDPRTGKCERTFTGHSGPV 652
Score = 203 (76.5 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 58/182 (31%), Positives = 89/182 (48%)
Query: 231 KCVI-CLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
+C I GHT V C+++ D ++ TGS D TIK+W+T G+ +R L+GH + L
Sbjct: 339 RCSIKTFKGHTNGVMCLQFE-DNILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQF 397
Query: 290 STEYALRTGAFDHTGKQYS--SPEEMKKAALERYNKIKGNAPER-LVSGSDDFTMFLWEP 346
+ L +G+ D T K ++ + E + R I + L SGS D T+ +W
Sbjct: 398 D-DTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFDASILASGSVDKTVKIWN- 455
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY 406
+ + GH VN V + V SAS D +++LW+ T + F GHVG V
Sbjct: 456 -FEDKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQ 514
Query: 407 QI 408
Q+
Sbjct: 515 QV 516
Score = 168 (64.2 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 61/225 (27%), Positives = 105/225 (46%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
++ + ++ GHT+ V +V R + S S D TVRLWDL+T+T + GH V +
Sbjct: 458 DKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVV 517
Query: 158 ----------WSADGKHLVSGSKAGELQCWDPQTGKPS-G-NPLSGHKKWIT-GISWEPV 204
A+ ++ + +G+ DP + + S G P + + + G S++
Sbjct: 518 PLPREFEFEEHDAECENDDLSTTSGDA---DPPSIQASMGLEPNAAYSQSSAFGTSFDNG 574
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTI 263
AP R V+++ D R+W+ + +C+ GH V + G D + I +G++D I
Sbjct: 575 RA-APPRYMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWAL--GADTLRIVSGAEDRMI 631
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
K+W+ GK R GH V + L + TG+ D + YS
Sbjct: 632 KIWDPRTGKCERTFTGHSGPVTCIGLG-DSRFATGSEDCEVRMYS 675
Score = 38 (18.4 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 6/22 (27%), Positives = 16/22 (72%)
Query: 434 LYSWSADSRLLLSGSKDSTLKV 455
+++ AD+ ++SG++D +K+
Sbjct: 612 VWALGADTLRIVSGAEDRMIKI 633
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 272 (100.8 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 76/254 (29%), Positives = 122/254 (48%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER----YNKIKGNAPER--LV 333
VN + EY L +G+ D T + + + + +E I N P+ L
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFN-PDGCCLY 247
Query: 334 SG-SDDFTMFLWEP 346
SG D ++ WEP
Sbjct: 248 SGCQDSLRVYGWEP 261
Score = 218 (81.8 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 53/168 (31%), Positives = 81/168 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S + ++ WD GK GH + + + P S S D
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHPNEY-----LLASGSSDRTI 213
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
R WD+ + V C+ G V + + DG +Y+G QD +++V WE
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 204 (76.9 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 58/166 (34%), Positives = 79/166 (47%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + F
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGSKAGELQCWD 178
+ L SGS ++ WD
Sbjct: 199 PNEYLLASGSSDRTIRFWD 217
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 268 (99.4 bits), Expect = 9.6e-21, P = 9.6e-21
Identities = 72/252 (28%), Positives = 116/252 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+ S I+GH V +A P A+G+GD +++WDL + TGH + V +A
Sbjct: 163 KLSRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAV 222
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
S +L S + +++CWD + K + GH + ++ P ++ ++ +
Sbjct: 223 STKHPYLFSCGEDRQVKCWDLEYNKVIRH-YHGHLSAVYSLALHPT-IDV----LATSGR 276
Query: 219 DGDARIWDVSLRKCVICLSGHTLAV-TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D ARIWD+ + V L+GHT V + V + I TGS D T+++W+ GK + L
Sbjct: 277 DSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTL 336
Query: 278 KGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKI----KGNAPERLV 333
H V S+ L + A KQ+ PE + + I N+ LV
Sbjct: 337 TNHKKSVRSIVLHPSLYMFASASPDNIKQWRCPEGKFVQNISGHTSIVNCMAANSEGVLV 396
Query: 334 SGSDDFTMFLWE 345
SG D+ TMF W+
Sbjct: 397 SGGDNGTMFFWD 408
Score = 221 (82.9 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 61/209 (29%), Positives = 95/209 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV S+A P LA+ D+T R+WD+ T+ + TGH N V + A +
Sbjct: 254 GHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQI 313
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
++GS ++ WD GK S L+ HKK + I P F SAS D + + W
Sbjct: 314 ITGSHDSTVRLWDLAAGK-SVCTLTNHKKSVRSIVLHP-----SLYMFASASPD-NIKQW 366
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
K V +SGHT V C+ +GV+ +G + T+ W+ G + + V
Sbjct: 367 RCPEGKFVQNISGHTSIVNCMAANSEGVLVSGGDNGTMFFWDWRTGYNFQRFQAP---VQ 423
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMK 314
++ +E + FD +G + + E K
Sbjct: 424 PGSMDSEAGIFAMCFDQSGSRLITAEADK 452
Score = 202 (76.2 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 66/224 (29%), Positives = 101/224 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + F + + D +IWD++ K + L+GH V V
Sbjct: 168 ISGHLGWVRCIAVEPGN-----EWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAV 222
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V SLAL T L T D T +
Sbjct: 223 STKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARI 282
Query: 307 YSSPEEMKKAALERY-NKIKGNAPE----RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + N + + ++++GS D T+ LW+ A K T +T H++
Sbjct: 283 WDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCT-LTNHKK 341
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
V + P ASAS D +IK W GKFV GH V
Sbjct: 342 SVRSIVLHPSLYMFASASPD-NIKQWRCPEGKFVQNISGHTSIV 384
Score = 137 (53.3 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 49/181 (27%), Positives = 72/181 (39%)
Query: 236 LSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-- 292
+SGH V C+ G+ TG+ D IK+W+ GKL L GH V +A+ST+
Sbjct: 168 ISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHP 227
Query: 293 YALRTGAFDHTGK----QYSSPEEMKKAALER-YNKIKGNAPERLVSGSDDFTMFLWEPA 347
Y G D K +Y+ L Y+ + L + D T +W+
Sbjct: 228 YLFSCGE-DRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMR 286
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
T +TGH V V + + S D +++LW+ GK V H V
Sbjct: 287 TKANVHT-LTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRS 345
Query: 408 I 408
I
Sbjct: 346 I 346
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 271 (100.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 75/254 (29%), Positives = 122/254 (48%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER----YNKIKGNAPER--LV 333
VN + EY L +G+ D T + + + + +E + N P+ L
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN-PDGCCLY 247
Query: 334 SG-SDDFTMFLWEP 346
SG D ++ WEP
Sbjct: 248 SGCQDSLRVYGWEP 261
Score = 219 (82.2 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 54/168 (32%), Positives = 81/168 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S + ++ WD GK GH + + + P S S D
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHPNEY-----LLASGSSDRTI 213
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
R WD+ + V C+ G V V + DG +Y+G QD +++V WE
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 204 (76.9 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 58/166 (34%), Positives = 79/166 (47%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + F
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGSKAGELQCWD 178
+ L SGS ++ WD
Sbjct: 199 PNEYLLASGSSDRTIRFWD 217
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 271 (100.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 75/254 (29%), Positives = 122/254 (48%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER----YNKIKGNAPER--LV 333
VN + EY L +G+ D T + + + + +E + N P+ L
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN-PDGCCLY 247
Query: 334 SG-SDDFTMFLWEP 346
SG D ++ WEP
Sbjct: 248 SGCQDSLRVYGWEP 261
Score = 219 (82.2 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 54/168 (32%), Positives = 81/168 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S + ++ WD GK GH + + + P S S D
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHPNEY-----LLASGSSDRTI 213
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
R WD+ + V C+ G V V + DG +Y+G QD +++V WE
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 204 (76.9 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 58/166 (34%), Positives = 79/166 (47%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + F
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGSKAGELQCWD 178
+ L SGS ++ WD
Sbjct: 199 PNEYLLASGSSDRTIRFWD 217
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 271 (100.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 75/254 (29%), Positives = 122/254 (48%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER----YNKIKGNAPER--LV 333
VN + EY L +G+ D T + + + + +E + N P+ L
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN-PDGCCLY 247
Query: 334 SG-SDDFTMFLWEP 346
SG D ++ WEP
Sbjct: 248 SGCQDSLRVYGWEP 261
Score = 219 (82.2 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 54/168 (32%), Positives = 81/168 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S + ++ WD GK GH + + + P S S D
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHPNEY-----LLASGSSDRTI 213
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
R WD+ + V C+ G V V + DG +Y+G QD +++V WE
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 204 (76.9 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 58/166 (34%), Positives = 79/166 (47%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + F
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGSKAGELQCWD 178
+ L SGS ++ WD
Sbjct: 199 PNEYLLASGSSDRTIRFWD 217
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 271 (100.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 75/254 (29%), Positives = 122/254 (48%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER----YNKIKGNAPER--LV 333
VN + EY L +G+ D T + + + + +E + N P+ L
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN-PDGCCLY 247
Query: 334 SG-SDDFTMFLWEP 346
SG D ++ WEP
Sbjct: 248 SGCQDSLRVYGWEP 261
Score = 219 (82.2 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 54/168 (32%), Positives = 81/168 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S + ++ WD GK GH + + + P S S D
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHPNEY-----LLASGSSDRTI 213
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
R WD+ + V C+ G V V + DG +Y+G QD +++V WE
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 204 (76.9 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 58/166 (34%), Positives = 79/166 (47%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + F
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGSKAGELQCWD 178
+ L SGS ++ WD
Sbjct: 199 PNEYLLASGSSDRTIRFWD 217
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 267 (99.0 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 83/306 (27%), Positives = 139/306 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH V +V FSPD +ASG D V++W +T ++ GH + I+WS DG
Sbjct: 172 LRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGA 231
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+ SGS ++ W+ TGK P GH ++ I++ P VS S D
Sbjct: 232 TIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKG-----NMLVSGSYDEAVF 286
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+WDV + + L H+ V+ + DG + + D +++W+T+ G+ +R L +
Sbjct: 287 LWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDN 346
Query: 283 W-VNSLALST--EYALR------TGAFDHT-G---KQYSSPEEMK---KAALERYNK-IK 325
V+S+ S +Y L +D+ G K Y K A Y + I
Sbjct: 347 PPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIP 406
Query: 326 GNAPERL--VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV--YFSPDGQWVASASFD 381
G P VSGS+D + W+ V+K+ R+ H +V V + +G+++ S D
Sbjct: 407 GRTPGYAFAVSGSEDGAILCWD-VVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLD 465
Query: 382 KSIKLW 387
++++W
Sbjct: 466 GTVRVW 471
Score = 232 (86.7 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 64/195 (32%), Positives = 101/195 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT----QTPMFKCTGHKNWVLCIAW 158
T GH + ++++SPDG +ASGS D T+RLW++ T TP GH N+V IA+
Sbjct: 213 TFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFI---GHHNYVYAIAF 269
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS--WEPVHLNAPCRRFVSA 216
S G LVSGS + WD ++ + + L H ++GI W+ L A C
Sbjct: 270 SPKGNMLVSGSYDEAVFLWDVRSARVMKS-LPAHSDPVSGIDVVWDGT-LIASC------ 321
Query: 217 SKDGDARIWDVSLRKCVICLSGH-TLAVTCVKWGGDG--VIYTGSQDCTIKVWETTQGKL 273
+ DG RIWD S +C+ L V+ VK+ +G V+ DC +++W+ +G+
Sbjct: 322 ATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDC-VRLWDYVEGRC 380
Query: 274 IRELKGHGHWVNSLA 288
++ +GH + SL+
Sbjct: 381 LKTYQGHSNKKYSLS 395
Score = 197 (74.4 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 55/228 (24%), Positives = 104/228 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L GH + ++ + + P S DG ++W S K + GH ++ + W
Sbjct: 172 LRGHLRGVSAVRFSP-----DASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISW 226
Query: 249 GGDGV-IYTGSQDCTIKVWETTQGKLI-RELKGHGHWVNSLALSTE-YALRTGAFDHTGK 305
DG I +GS D TI++W GK GH ++V ++A S + L +G++D
Sbjct: 227 SPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVF 286
Query: 306 QYS--SPEEMKK--AALERYNKIKGNAPERLVSG-SDDFTMFLWEPAVSKQPKTRMTGHQ 360
+ S MK A + + I L++ + D + +W+ + + +T +
Sbjct: 287 LWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDN 346
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G++V + + D ++LW+ G+ + ++GH Y +
Sbjct: 347 PPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSL 394
Score = 130 (50.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 53/193 (27%), Positives = 88/193 (45%)
Query: 89 QAVFR--IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC 146
+AVF +R R ++ H++ V + DG +AS + D VR+WD +T +
Sbjct: 283 EAVFLWDVRSA-RVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTL 341
Query: 147 TGHKNW-VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGH--KKWIT----GI 199
N V + +S +GK++++ + ++ WD G+ GH KK+ G+
Sbjct: 342 VHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCL-KTYQGHSNKKYSLSGAFGV 400
Query: 200 SWEPVHLNAPCRRF-VSASKDGDARIWDVSLRKCVICLSGH---TLAV-TCVKWGGDGVI 254
+ + P F VS S+DG WDV +K + + H L V TC G ++
Sbjct: 401 YGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMV 460
Query: 255 YTGSQDCTIKVWE 267
G D T++VWE
Sbjct: 461 SCGL-DGTVRVWE 472
Score = 128 (50.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 38/146 (26%), Positives = 60/146 (41%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
F GH V + +S D + SG G ++ W TGK GH I+ ISW P
Sbjct: 170 FLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYT-FEGHLAGISTISWSP 228
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKC-VICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
S S D R+W+V K GH V + + G ++ +GS D
Sbjct: 229 DGAT-----IASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDE 283
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
+ +W+ ++++ L H V+ +
Sbjct: 284 AVFLWDVRSARVMKSLPAHSDPVSGI 309
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+ SG D + +W + K T GH ++ + +SPDG +AS S DK+I+LWN T
Sbjct: 191 IASGGADGAVKVWAASTGKLIYT-FEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLT 249
Query: 392 GK-FVAVFRGHVGPVYQIRF 410
GK F GH VY I F
Sbjct: 250 GKAHPTPFIGHHNYVYAIAF 269
Score = 115 (45.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY 406
+V+ + K + GH + V+ V FSPD +AS D ++K+W +TGK + F GH+ +
Sbjct: 163 SVNYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGIS 222
Query: 407 QI 408
I
Sbjct: 223 TI 224
Score = 55 (24.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 432 MSLYSWSADSRLLLSGSKDSTLKV 455
+S SWS D + SGS D T+++
Sbjct: 221 ISTISWSPDGATIASGSDDKTIRL 244
Score = 41 (19.5 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 369 SPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
+P + S S D +I W+ T K + H G V
Sbjct: 409 TPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVV 445
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 269 (99.8 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 66/204 (32%), Positives = 103/204 (50%)
Query: 104 IAGHTEAVLSVAFSPD-GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H+ V S+ GR LA+G D V +W +N + TGH + + SA
Sbjct: 16 IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S D D
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLLGHKANICSLDFHPYG------SFVASGSLDTD 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WDV + C+ HT AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHT 303
VN + +EY L +G+ D T
Sbjct: 189 SGPVNVVEFHPSEYLLASGSSDRT 212
Score = 213 (80.0 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 57/202 (28%), Positives = 91/202 (45%)
Query: 71 LEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSG 128
+E ++S ++ L + R+ + T+ GH + S+ F P G +ASGS
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP 188
DT ++LWD+ + +FK H V C+ +S DGK L S + ++ WD GK
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFE- 184
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+GH + + + P S S D R WD+ V C+ V C+ +
Sbjct: 185 FTGHSGPVNVVEFHPSEY-----LLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILF 239
Query: 249 GGDGV-IYTGSQDCTIKV--WE 267
DG +Y G QD +++V WE
Sbjct: 240 NPDGCCLYGGFQD-SLRVYGWE 260
Score = 181 (68.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 59/218 (27%), Positives = 96/218 (44%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETT 269
R + D +W V+ CV+ L+GHT + ++ + +I GSQ +I+VW+
Sbjct: 34 RLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 93
Query: 270 QGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYN------ 322
K++R L GH + SL + + +G+ D K + + +K + +Y
Sbjct: 94 AAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW---DVRRKGCIFKYKSHTQAV 150
Query: 323 KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
+ +P+ L S +DD T+ LW+ K TGH VN V F P +AS S
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWDLTAGKV-MFEFTGHSGPVNVVEFHPSEYLLASGSS 209
Query: 381 DKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRY 418
D++I+ W+ V+ PV I F C Y
Sbjct: 210 DRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLY 247
Score = 165 (63.1 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 49/232 (21%), Positives = 102/232 (43%)
Query: 97 VNR--CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
VN+ C ++ GHT + S+ S + +GS ++R+WDL + GHK +
Sbjct: 50 VNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANIC 109
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ + G + SGS +++ WD + K H + + + + P +
Sbjct: 110 SLDFHPYGSFVASGSLDTDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSP-----DGKWLA 163
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKL 273
SA+ D ++WD++ K + +GH+ V V++ + ++ +GS D TI+ W+ + +
Sbjct: 164 SAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHV 223
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKI 324
+ ++ V + + + G F + + Y PE + + K+
Sbjct: 224 VSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPERCFDVVVVNWGKV 275
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 276 (102.2 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 99/357 (27%), Positives = 162/357 (45%)
Query: 114 VAFSPDGRQLASGSGDTTVRLWDLNTQT---PMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+AFSP LA G+ D TVRL+D+++ T + K GH + I +S G + S S+
Sbjct: 1789 LAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSE 1848
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
++ W+ QT K H I IS+ P + C +S S D ++W
Sbjct: 1849 DLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTN---ECE-LISCSDDYSTKVWSRFTT 1904
Query: 231 KCVICLSGHTLAVT-CVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLA 288
+ G T + CV + DG I T S+DC+I V+ + KL+ LKGH WVN
Sbjct: 1905 STTLSTEGSTNTIKHCV-YSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCT 1963
Query: 289 LSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA-----PERLVSGSDDFTMF 342
S + L +G +D + ++ + + L+ ++ A + ++S S D ++
Sbjct: 1964 FSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVK 2023
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQW-VASASFDKSIKLWNGTTGKFVAVFRGH 401
+W+ + T + HQ ++ V S D + S+S D IK W G +A GH
Sbjct: 2024 VWDAQFGSEI-TSLR-HQTRISDVVSSSDASGRIFSSSDDGIIKSWYPVAGSCLATLTGH 2081
Query: 402 VGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLS---GSKDSTLKV 455
GP+ Q++F P++ S +S S+D+ + LS S D T+K+
Sbjct: 2082 SGPIKQVQFN-------PNSGGGGSSSFSSFSSFSSSSDAPVTLSIASSSDDGTVKL 2131
Score = 218 (81.8 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 82/313 (26%), Positives = 145/313 (46%)
Query: 110 AVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGS 169
++ S FS + +Q+ + + V L+D+N+Q + H V + S DG ++V+GS
Sbjct: 1700 SIKSCKFSANSKQILATTMKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGS 1759
Query: 170 KAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVS- 228
+ W G N L W +++ P P V A+ D R++DVS
Sbjct: 1760 DDATAKVWSSTLGTQLTNFLIPGDCWANCLAFSPTQ---PLLA-VGAT-DCTVRLFDVSS 1814
Query: 229 --LRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL-KGHGHWV 284
+ + V L GHT A+T + + G +I + S+D IKVW K + K H +
Sbjct: 1815 NTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPI 1874
Query: 285 NSLALS--TEYALRTGAFDHTGKQYSSPEEMKKAALE-RYNKIKG--NAPER--LVSGSD 337
N ++ + E L + + D++ K +S + E N IK +P+ + + S
Sbjct: 1875 NCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSR 1934
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
D ++ ++ + SK+ R+ GH VN FSPD + + S +D ++++WN T K +
Sbjct: 1935 DCSIAVYLCS-SKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLC 1993
Query: 398 FRGHVGPVYQIRF 410
+GH + + F
Sbjct: 1994 LKGHSSSIEKAFF 2006
Score = 206 (77.6 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 69/288 (23%), Positives = 123/288 (42%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSA 160
A + GHT A+ S+ FSP G +AS S D +++W++ T + H + + CI+++
Sbjct: 1822 AKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNP 1881
Query: 161 DGK-HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+ L+S S + W T + + G I + P + + S+D
Sbjct: 1882 TNECELISCSDDYSTKVWSRFTTSTTLST-EGSTNTIKHCVYSP-----DGKYIATVSRD 1935
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELK 278
++ S +K + L GHT V + D + +G D ++VW K + LK
Sbjct: 1936 CSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLK 1995
Query: 279 GHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIK-----GNAPERL 332
GH + + + + + +FD + K + + + +L +I +A R+
Sbjct: 1996 GHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITSLRHQTRISDVVSSSDASGRI 2055
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
S SDD + W P T +TGH + V F+P+ S+SF
Sbjct: 2056 FSSSDDGIIKSWYPVAGSCLAT-LTGHSGPIKQVQFNPNSGGGGSSSF 2102
Score = 205 (77.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 87/371 (23%), Positives = 150/371 (40%)
Query: 66 PLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPV--NRCSATIAGHTEAVLSVAFSPDGRQL 123
P SY HKV+ + + ++ + +P + C TI G + + +S DG +
Sbjct: 1480 PNKSYC--HKVAASESGGLKHKTWIEWLNKPQIKDSCKQTITGLEDGATACCYSRDGSMI 1537
Query: 124 ASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGK 183
AS D+ + ++ + + + GH NW+ C ++S DGK L S S + WD G
Sbjct: 1538 ASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSDDGKTLASSSWDNTVIVWDLIVGN 1597
Query: 184 PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL-SGHTLA 242
+ H + + + P N +S + D I++ S + S H+
Sbjct: 1598 QI-HQFKDHSRAVNYCEFSPTANNL----LMSCAWDSSIIIFNTSDKNIFRNFRSAHSKP 1652
Query: 243 VTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY-ALRTGAF 300
V W DG +I + S D TIK+W LK H +++ S Y ++++ F
Sbjct: 1653 VNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLK---HVIDA---SLSYGSIKSCKF 1706
Query: 301 DHTGKQYSSPEEMKKAAL------ERYNKIKGNAPER------------LVSGSDDFTMF 342
KQ + MK L ++ + GN + +V+GSDD T
Sbjct: 1707 SANSKQILATT-MKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAK 1765
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN---GTTGKFVAVFR 399
+W + Q + N + FSP +A + D +++L++ T + VA
Sbjct: 1766 VWSSTLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLH 1825
Query: 400 GHVGPVYQIRF 410
GH + I F
Sbjct: 1826 GHTRAITSITF 1836
Score = 195 (73.7 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 54/184 (29%), Positives = 85/184 (46%)
Query: 101 SATIA--GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
S T++ G T + +SPDG+ +A+ S D ++ ++ +++ +F+ GH +WV +
Sbjct: 1905 STTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTF 1964
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
S D K LVSG L+ W+ +T K L GH I E + +SAS
Sbjct: 1965 SPDSKKLVSGGWDFNLRVWNIKTQKEL-LCLKGHSSSI-----EKAFFTKDQKYIISASF 2018
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD--GVIYTGSQDCTIKVWETTQGKLIRE 276
DG ++WD + L H ++ V D G I++ S D IK W G +
Sbjct: 2019 DGSVKVWDAQFGSEITSLR-HQTRISDVVSSSDASGRIFSSSDDGIIKSWYPVAGSCLAT 2077
Query: 277 LKGH 280
L GH
Sbjct: 2078 LTGH 2081
Score = 135 (52.6 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 45/180 (25%), Positives = 71/180 (39%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD--GVIYTGSQDCTIKVWETTQG 271
+SAS DG ++WD + L H ++ V D G I++ S D IK W G
Sbjct: 2014 ISASFDGSVKVWDAQFGSEITSLR-HQTRISDVVSSSDASGRIFSSSDDGIIKSWYPVAG 2072
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER 331
+ L GH + + + G + +SS A +
Sbjct: 2073 SCLATLTGHSGPIKQVQFNPNSG---GGGSSSFSSFSSFSSSSDAPVTL----------S 2119
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+ S SDD T+ LWE + H+ +N FS DG++VA+ D + +W+ T
Sbjct: 2120 IASSSDDGTVKLWE---FNSATATTSAHKGSINQCVFSKDGKYVATCGQDCVLNIWDAKT 2176
Score = 50 (22.7 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 31/128 (24%), Positives = 52/128 (40%)
Query: 283 WVNSLALSTEY-ALRTGAFDHTGKQYS--SPEEMKKAALERYNKIKGNAP--ERLVSGSD 337
WV S+ ST L G+ K +S + + + Y +P + L G+
Sbjct: 2280 WVESVEFSTSGDLLAAGSRTKQVKIFSPLNDKPVTHQTSSSYVTSLSFSPNDKYLAIGTF 2339
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
D T+ L + A K + +T + + F D + S S D+S+ +WN +T
Sbjct: 2340 DGTVELLDIASGKLRRI-LTTQVSSITSLKFL-DSTRLVSVSNDRSLIVWNFSTSSIENE 2397
Query: 398 FRGHVGPV 405
F H P+
Sbjct: 2398 FI-HQSPI 2404
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 266 (98.7 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 70/248 (28%), Positives = 117/248 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GHT V ++A A+GS D T+++WDL + TGH + + + S+
Sbjct: 203 ISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHP 262
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + ++ CWD ++ K N GH++ + ++ P L+ S +D R
Sbjct: 263 YLFSVGEDNKVLCWDLESNKQVRN-YYGHRQGVYSVALHPT-LDV----LFSGGRDNCVR 316
Query: 224 IWDVSLRKCVICLSGHTLAVTCVK-WGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+WD+ R + + GH + +K D + +GS D T+K+W+ G L H
Sbjct: 317 VWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKK 376
Query: 283 WVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V S+ + EY+ TGA D+ KQ+ P+ L +N I NA LVSG D
Sbjct: 377 GVRSMVIHEKEYSFATGAADNI-KQWKCPDGSFIKNLSGHNSIINAMALNADNVLVSGGD 435
Query: 338 DFTMFLWE 345
+ ++ W+
Sbjct: 436 NGSISFWD 443
Score = 195 (73.7 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 60/210 (28%), Positives = 97/210 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI-AWSADGKH 164
GH + V SVA P L SG D VR+WD+ T+ +F+ GHK +L + + +AD +
Sbjct: 289 GHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLKSQNADPQ- 347
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
++SGS ++ WD TG S L+ HKK G+ +H F + + D + +
Sbjct: 348 VISGSMDTTVKLWDLATGT-SAATLTNHKK---GVRSMVIHEKE--YSFATGAAD-NIKQ 400
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
W + LSGH + + D V+ +G + +I W+ G ++ + V
Sbjct: 401 WKCPDGSFIKNLSGHNSIINAMALNADNVLVSGGDNGSISFWDWKTGYCFQKTQSI---V 457
Query: 285 NSLALSTEYALRTGAFDHTGKQYSSPEEMK 314
+L E + AFD TG + + E K
Sbjct: 458 QPGSLEGEAGIFDMAFDKTGSRLITCEADK 487
Score = 176 (67.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 53/197 (26%), Positives = 87/197 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH A+ + S L S D V WDL + + GH+ V +A
Sbjct: 244 TLTGHVSAIRGLEVSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTL 303
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L SG + ++ WD +T + + + GHK I + + NA + +S S D
Sbjct: 304 DVLFSGGRDNCVRVWDMRT-RANIFEMKGHKGTILSLKSQ----NAD-PQVISGSMDTTV 357
Query: 223 RIWDVSLRKCVICLSGHTLAV-TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WD++ L+ H V + V + TG+ D IK W+ G I+ L GH
Sbjct: 358 KLWDLATGTSAATLTNHKKGVRSMVIHEKEYSFATGAAD-NIKQWKCPDGSFIKNLSGHN 416
Query: 282 HWVNSLALSTEYALRTG 298
+N++AL+ + L +G
Sbjct: 417 SIINAMALNADNVLVSG 433
Score = 164 (62.8 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 52/220 (23%), Positives = 97/220 (44%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ + + F + S D ++WD++ + + L+GH A+ ++
Sbjct: 203 ISGHTGWVRAIAVDKSN-----EWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEV 257
Query: 249 GG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D + W+ K +R GH V S+AL T L +G D+ +
Sbjct: 258 SSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRV 317
Query: 307 YSSPEEMKKAALERYN----KIKG-NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ ++ + +K NA +++SGS D T+ LW+ A T +T H++
Sbjct: 318 WDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAAT-LTNHKK 376
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V + A+ + D +IK W G F+ GH
Sbjct: 377 GVRSMVIHEKEYSFATGAAD-NIKQWKCPDGSFIKNLSGH 415
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 262 (97.3 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 81/293 (27%), Positives = 135/293 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH A+ SV FSP G+QLA+ S DT + LW+ Q F+ GHK+ V + +S G L
Sbjct: 16 GHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLL 75
Query: 166 VSGSKAGELQCWDP-QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S S+ ++ W P + GK S H + + + +A + +AS+D ++
Sbjct: 76 ASASRDRTVRLWIPDKRGKSS--EFKAHTAPVRSVDF-----SADGQFLATASEDKSIKV 128
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W++ ++ + L HT V C K+ DG +I + S+D TIK+W+TT + + +
Sbjct: 129 WNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PER--LVS 334
N + + + + DHT K + + K L+ Y G P +++
Sbjct: 189 ANFVDFNPNGTCIASAGSDHTVKIWDI--RVNKL-LQHYQVHSGGVNCVSFHPSGNYIIT 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GH V V FS G+ +S D + LW
Sbjct: 246 ASSDGTLKILDLLEGRLIYT-LQGHTGPVFTVSFSKGGELFSSGGADTQVLLW 297
Score = 249 (92.7 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 70/228 (30%), Positives = 111/228 (48%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S+ HT V SV FS DG+ LA+ S D ++++W++ Q ++ H +WV C +S
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSP 154
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S+ ++ WD T K N S + + + P N C SA D
Sbjct: 155 DGRLIVSCSEDKTIKIWDT-TNKQCVNNFSDSVGFANFVDFNP---NGTC--IASAGSDH 208
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
+IWD+ + K + H+ V CV + G I T S D T+K+ + +G+LI L+G
Sbjct: 209 TVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQG 268
Query: 280 HGHWVNSLALSTEYAL-RTGAFD------HTGKQYSSPEEMKKAALER 320
H V +++ S L +G D T Y + ++M K L+R
Sbjct: 269 HTGPVFTVSFSKGGELFSSGGADTQVLLWRTNFDYLNCKDMIKRNLKR 316
Score = 234 (87.4 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 76/275 (27%), Positives = 118/275 (42%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLS--GHKKWITGISWEPVH 205
GHK + + +S GK L + S L W+ KP GHK +T + + P+
Sbjct: 16 GHKAAITSVDFSPSGKQLATASWDTFLMLWNC---KPQARAFRYVGHKDVVTSVQFSPLG 72
Query: 206 LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIK 264
N SAS+D R+W R HT V V + DG + T S+D +IK
Sbjct: 73 -NL----LASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIK 127
Query: 265 VWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALERYNK 323
VW + + + L H HWV S + L D T K + + K + ++
Sbjct: 128 VWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN---KQCVNNFSD 184
Query: 324 IKGNA------PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
G A P + S D T+ +W+ V+K + H VN V F P G ++
Sbjct: 185 SVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQV-HSGGVNCVSFHPSGNYI 243
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+AS D ++K+ + G+ + +GH GPV+ + F
Sbjct: 244 ITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF 278
Score = 119 (46.9 bits), Expect = 0.00050, P = 0.00050
Identities = 45/143 (31%), Positives = 68/143 (47%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW- 387
++L + S D + LW Q + R GH+ +V V FSP G +ASAS D++++LW
Sbjct: 31 KQLATASWDTFLMLWN--CKPQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLWI 88
Query: 388 NGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSN---FYCVVDMSCCMSLYS------W- 437
GK + F+ H PV + F F ++ V +M LYS W
Sbjct: 89 PDKRGKS-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWV 147
Query: 438 -----SADSRLLLSGSKDSTLKV 455
S D RL++S S+D T+K+
Sbjct: 148 RCAKFSPDGRLIVSCSEDKTIKI 170
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 264 (98.0 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 83/304 (27%), Positives = 147/304 (48%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
SA + GH + V++ D L +GS D T+++W ++ M+ GH V S
Sbjct: 248 SAVLRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQ 306
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
G+++VSGS ++ W G + L GH + ++ L V+ S+D
Sbjct: 307 CGRYIVSGSTDRTVKVWSTVDGSLL-HTLQGHTSTVRCMAMAGSIL-------VTGSRDT 358
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WDV + + L GH AV CV++ G V+ +G D T+K+W G+ IR L GH
Sbjct: 359 TLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVV-SGGYDFTVKIWNAHTGRCIRTLTGH 417
Query: 281 GHWVNSLALSTEYALR-TGAFDHTGK--QYSSPEEMKKAAL-ERYNKIKGNAPER---LV 333
+ V SL +E ++ +G+ D + + ++ PE + AL + + + R LV
Sbjct: 418 NNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILV 477
Query: 334 SGSDDFTMFLWEPAVSKQPKTRM-TGHQQLVNHV-YFSPDGQWVASASFDKSIKLWNGTT 391
S + D + +W+ + + M +GH+ + + +F + VA++S D ++KLW+
Sbjct: 478 SCNADSHVRVWD--IHEGTCVHMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLWDIER 533
Query: 392 GKFV 395
G +
Sbjct: 534 GALI 537
Score = 249 (92.7 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 69/212 (32%), Positives = 106/212 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
AT+ GH AV V F DG + SG D TV++W+ +T + TGH N V + + ++
Sbjct: 372 ATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESE 429
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNP----LSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+ SGS ++ WD +P G L GH +G+ + N VS +
Sbjct: 430 RSIVCSGSLDTSIRVWD--FTRPEGQECVALLQGHTSLTSGMQ---LRGNI----LVSCN 480
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D R+WD+ CV LSGH A+T ++W G ++ T S D T+K+W+ +G LIR+L
Sbjct: 481 ADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIRDL 540
Query: 278 K-----GHGHWVNSL-ALSTEYALRTGAFDHT 303
G+G + L + ST A G+ ++T
Sbjct: 541 VTLDSGGNGGCIWRLCSTSTMLACAVGSRNNT 572
Score = 217 (81.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 58/182 (31%), Positives = 92/182 (50%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTE 292
L GH +TC++ D V+ TGS D T+KVW +G+++ L GH G W + ++
Sbjct: 251 LRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGR 309
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYN---KIKGNAPERLVSGSDDFTMFLWEPAVS 349
Y + +G+ D T K +S+ + L+ + + A LV+GS D T+ +W+
Sbjct: 310 YIV-SGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESG 368
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ T + GH V V F DG V S +D ++K+WN TG+ + GH VY +
Sbjct: 369 RHLAT-LHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLL 425
Query: 410 FE 411
FE
Sbjct: 426 FE 427
Score = 185 (70.2 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 72/292 (24%), Positives = 125/292 (42%)
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGN 187
D + W+ N GH++ V+ C+ D LV+GS L+ W G+
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDV--LVTGSDDNTLKVWCIDKGEVMYT 291
Query: 188 PLSGHKKWITGISWEPVHLNAPCRRF-VSASKDGDARIWDVSLRKCVICLSGHTLAVTCV 246
L GH TG W + C R+ VS S D ++W + L GHT V C+
Sbjct: 292 -LVGH----TGGVW--TSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCM 344
Query: 247 KWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQ 306
G ++ TGS+D T++VW+ G+ + L GH V + + +G +D T K
Sbjct: 345 AMAGS-ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVV-SGGYDFTVKI 402
Query: 307 YSSPEEMKKAALERYNKIKGNA---PERLV--SGSDDFTMFLWE---PAVSKQPKTRMTG 358
+++ L +N + ER + SGS D ++ +W+ P ++ + G
Sbjct: 403 WNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPE-GQECVALLQG 461
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
H L + + G + S + D +++W+ G V + GH + +++
Sbjct: 462 HTSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQW 511
Score = 147 (56.8 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 41/133 (30%), Positives = 64/133 (48%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GHKNWVL 154
RC T+ GH V S+ F + + SGS DT++R+WD T+ +C GH + L
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDF-TRPEGQECVALLQGHTS--L 465
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
G LVS + ++ WD G + LSGH+ IT + W ++ A
Sbjct: 466 TSGMQLRGNILVSCNADSHVRVWDIHEGT-CVHMLSGHRSAITSLQWFGRNMVA------ 518
Query: 215 SASKDGDARIWDV 227
++S DG ++WD+
Sbjct: 519 TSSDDGTVKLWDI 531
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 264 (98.0 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 83/304 (27%), Positives = 147/304 (48%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
SA + GH + V++ D L +GS D T+++W ++ M+ GH V S
Sbjct: 248 SAVLRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQ 306
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
G+++VSGS ++ W G + L GH + ++ L V+ S+D
Sbjct: 307 CGRYIVSGSTDRTVKVWSTVDGSLL-HTLQGHTSTVRCMAMAGSIL-------VTGSRDT 358
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WDV + + L GH AV CV++ G V+ +G D T+K+W G+ IR L GH
Sbjct: 359 TLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVV-SGGYDFTVKIWNAHTGRCIRTLTGH 417
Query: 281 GHWVNSLALSTEYALR-TGAFDHTGK--QYSSPEEMKKAAL-ERYNKIKGNAPER---LV 333
+ V SL +E ++ +G+ D + + ++ PE + AL + + + R LV
Sbjct: 418 NNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILV 477
Query: 334 SGSDDFTMFLWEPAVSKQPKTRM-TGHQQLVNHV-YFSPDGQWVASASFDKSIKLWNGTT 391
S + D + +W+ + + M +GH+ + + +F + VA++S D ++KLW+
Sbjct: 478 SCNADSHVRVWD--IHEGTCVHMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLWDIER 533
Query: 392 GKFV 395
G +
Sbjct: 534 GALI 537
Score = 249 (92.7 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 69/212 (32%), Positives = 106/212 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
AT+ GH AV V F DG + SG D TV++W+ +T + TGH N V + + ++
Sbjct: 372 ATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESE 429
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNP----LSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+ SGS ++ WD +P G L GH +G+ + N VS +
Sbjct: 430 RSIVCSGSLDTSIRVWD--FTRPEGQECVALLQGHTSLTSGMQ---LRGNI----LVSCN 480
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D R+WD+ CV LSGH A+T ++W G ++ T S D T+K+W+ +G LIR+L
Sbjct: 481 ADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIRDL 540
Query: 278 K-----GHGHWVNSL-ALSTEYALRTGAFDHT 303
G+G + L + ST A G+ ++T
Sbjct: 541 VTLDSGGNGGCIWRLCSTSTMLACAVGSRNNT 572
Score = 217 (81.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 58/182 (31%), Positives = 92/182 (50%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTE 292
L GH +TC++ D V+ TGS D T+KVW +G+++ L GH G W + ++
Sbjct: 251 LRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGR 309
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYN---KIKGNAPERLVSGSDDFTMFLWEPAVS 349
Y + +G+ D T K +S+ + L+ + + A LV+GS D T+ +W+
Sbjct: 310 YIV-SGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESG 368
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ T + GH V V F DG V S +D ++K+WN TG+ + GH VY +
Sbjct: 369 RHLAT-LHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLL 425
Query: 410 FE 411
FE
Sbjct: 426 FE 427
Score = 185 (70.2 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 72/292 (24%), Positives = 125/292 (42%)
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGN 187
D + W+ N GH++ V+ C+ D LV+GS L+ W G+
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDV--LVTGSDDNTLKVWCIDKGEVMYT 291
Query: 188 PLSGHKKWITGISWEPVHLNAPCRRF-VSASKDGDARIWDVSLRKCVICLSGHTLAVTCV 246
L GH TG W + C R+ VS S D ++W + L GHT V C+
Sbjct: 292 -LVGH----TGGVW--TSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCM 344
Query: 247 KWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQ 306
G ++ TGS+D T++VW+ G+ + L GH V + + +G +D T K
Sbjct: 345 AMAGS-ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVV-SGGYDFTVKI 402
Query: 307 YSSPEEMKKAALERYNKIKGNA---PERLV--SGSDDFTMFLWE---PAVSKQPKTRMTG 358
+++ L +N + ER + SGS D ++ +W+ P ++ + G
Sbjct: 403 WNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPE-GQECVALLQG 461
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
H L + + G + S + D +++W+ G V + GH + +++
Sbjct: 462 HTSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQW 511
Score = 147 (56.8 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 41/133 (30%), Positives = 64/133 (48%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GHKNWVL 154
RC T+ GH V S+ F + + SGS DT++R+WD T+ +C GH + L
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDF-TRPEGQECVALLQGHTS--L 465
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
G LVS + ++ WD G + LSGH+ IT + W ++ A
Sbjct: 466 TSGMQLRGNILVSCNADSHVRVWDIHEGT-CVHMLSGHRSAITSLQWFGRNMVA------ 518
Query: 215 SASKDGDARIWDV 227
++S DG ++WD+
Sbjct: 519 TSSDDGTVKLWDI 531
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 223 (83.6 bits), Expect = 5.3e-20, Sum P(2) = 5.3e-20
Identities = 57/186 (30%), Positives = 87/186 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH+ + V S DG SGS D T+RLWDL + GH VL +A+SAD + +
Sbjct: 62 GHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQI 121
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
VSGS+ ++ W+ GH W++ + + P H N P VS D ++W
Sbjct: 122 VSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSN-PI--IVSCGWDRTVKVW 178
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYT-GSQDCTIKVWETTQGKLIRELKGHGHWV 284
+++ K GH + V DG + T G +D +W+ GK + L+ H +
Sbjct: 179 NLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDII 237
Query: 285 NSLALS 290
N+L S
Sbjct: 238 NALCFS 243
Score = 197 (74.4 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 74/292 (25%), Positives = 132/292 (45%)
Query: 119 DGRQLASGSGDTTVRLW------DLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAG 172
D + S S D T+ +W D N P + GH +++ + S+DG + +SGS
Sbjct: 27 DPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQ 86
Query: 173 ELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR-K 231
L+ WD GK + GH K + +++ +A R+ VS S+D ++W+ K
Sbjct: 87 TLRLWDLAAGKTTRR-FEGHTKDVLSVAF-----SADNRQIVSGSRDKTIKLWNTLAECK 140
Query: 232 CVICLSGHTLAVTCVKWG---GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLA 288
I GHT V+CV++ + +I + D T+KVW KL GH ++N++
Sbjct: 141 FTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVT 200
Query: 289 LSTEYALRT-GAFDHTGKQYSSPEEMKKAALERYNKIKGN--APERL-VSGSDDFTMFLW 344
+S + +L T G D + + LE + I +P R + + ++ +W
Sbjct: 201 VSPDGSLCTSGGKDSKALLWDLNDGKNLYTLEHNDIINALCFSPNRYWLCVAYGPSIKIW 260
Query: 345 EPAVSK-----QPK----TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
+ A K +P+ T Q ++ + +S DGQ + + D +I++W
Sbjct: 261 DLACKKTVEELRPEVVSPTSKADQPQCLS-LAWSTDGQTLFAGYSDNTIRVW 311
Score = 195 (73.7 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 76/272 (27%), Positives = 117/272 (43%)
Query: 148 GHKNWVLCIAWSA-DGKHLVSGSKAGELQCW----DPQT--GKPSGNPLSGHKKWITGIS 200
GH WV IA + D ++S S+ L W D T G P L GH +I+ +
Sbjct: 13 GHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKR-LYGHSHFISDVV 71
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQ 259
L++ +S S D R+WD++ K GHT V V + D I +GS+
Sbjct: 72 -----LSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSR 126
Query: 260 DCTIKVWET-TQGKLIRELKGHGHWVNSLALSTEYA---LRTGAFDHTGKQYSSPEEMKK 315
D TIK+W T + K + GH WV+ + S ++ + + +D T K ++ K
Sbjct: 127 DKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLK 186
Query: 316 AALERYNKIKGN---APERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP 370
+N +P+ + SG D LW+ K T H ++N + FSP
Sbjct: 187 NNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYT--LEHNDIINALCFSP 244
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
+ W+ A + SIK+W+ K V R V
Sbjct: 245 NRYWLCVA-YGPSIKIWDLACKKTVEELRPEV 275
Score = 161 (61.7 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 65/223 (29%), Positives = 96/223 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW------DVSLRKCVICLSGHTLA 242
L GH W+T I+ P + +SAS+D +W D + L GH+
Sbjct: 11 LIGHNGWVTQIATNPKDPDT----IISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHF 66
Query: 243 VTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAF 300
++ V DG +GS D T+++W+ GK R +GH V S+A S + + +G+
Sbjct: 67 ISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSR 126
Query: 301 DHTGKQYSSPEEMKKAALE----------RYNKIKGNAPERLVSGSDDFTMFLWEPAVSK 350
D T K +++ E K E R++ N P +VS D T+ +W A K
Sbjct: 127 DKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSN-PI-IVSCGWDRTVKVWNLANCK 184
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
K GH +N V SPDG S D LW+ GK
Sbjct: 185 L-KNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGK 226
Score = 151 (58.2 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 53/185 (28%), Positives = 86/185 (46%)
Query: 236 LSGHTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQ------GKLIRELKGHGHWVNSL 287
L GH VT + I + S+D T+ VW+ T+ G + L GH H+++ +
Sbjct: 11 LIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDV 70
Query: 288 ALSTE--YALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPER-LVSGSDDFT 340
LS++ YAL +G++D T + + E + K + +A R +VSGS D T
Sbjct: 71 VLSSDGNYAL-SGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKT 129
Query: 341 MFLWEPAVSKQPKTRMTGHQQLVNHVYFSPD--GQWVASASFDKSIKLWNGTTGKFVAVF 398
+ LW + + GH V+ V FSP+ + S +D+++K+WN K
Sbjct: 130 IKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNH 189
Query: 399 RGHVG 403
GH G
Sbjct: 190 HGHNG 194
Score = 144 (55.7 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 52/184 (28%), Positives = 80/184 (43%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C TI GHT+ V V FSP+ + S D TV++W+L GH ++
Sbjct: 139 CKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNT 198
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K + WD GK + L H I + + P N R ++
Sbjct: 199 VTVSPDGSLCTSGGKDSKALLWDLNDGK-NLYTLE-HNDIINALCFSP---N---RYWLC 250
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVT-------CVK--WGGDG-VIYTGSQDCTIKV 265
+ +IWD++ +K V L ++ T C+ W DG ++ G D TI+V
Sbjct: 251 VAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRV 310
Query: 266 WETT 269
W+ +
Sbjct: 311 WQVS 314
Score = 134 (52.2 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ-----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
P+ ++S S D T+ +W+ + P+ R+ GH ++ V S DG + S S+D++
Sbjct: 28 PDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQT 87
Query: 384 IKLWNGTTGKFVAVFRGHVGPVYQIRF 410
++LW+ GK F GH V + F
Sbjct: 88 LRLWDLAAGKTTRRFEGHTKDVLSVAF 114
Score = 123 (48.4 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 33/79 (41%), Positives = 42/79 (53%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
+SGS D T+ LW+ A K + R GH + V V FS D + + S S DK+IKLWN
Sbjct: 80 LSGSWDQTLRLWDLAAGKTTR-RFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAE 138
Query: 393 -KFVAVFRGHVGPVYQIRF 410
KF GH V +RF
Sbjct: 139 CKFTIQEDGHTDWVSCVRF 157
Score = 63 (27.2 bits), Expect = 5.3e-20, Sum P(2) = 5.3e-20
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 427 DMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
D C+SL +WS D + L +G D+T++V
Sbjct: 283 DQPQCLSL-AWSTDGQTLFAGYSDNTIRV 310
Score = 58 (25.5 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 10/20 (50%), Positives = 18/20 (90%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
++SAD+R ++SGS+D T+K+
Sbjct: 113 AFSADNRQIVSGSRDKTIKL 132
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 260 (96.6 bits), Expect = 9.1e-20, P = 9.1e-20
Identities = 79/309 (25%), Positives = 142/309 (45%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++ +N ++ +A T V FS D + + +V +W K GH +
Sbjct: 191 VQQINLHASQVAD-TRPVAFCEFSADSEHIVTAGWSGSVAVWKREQCAQEIKFIGHSSQA 249
Query: 154 LCI-----AWSAD---GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
C A++ + ++VS S G + W P G L H + ++ +++ P
Sbjct: 250 GCARFHPGAFTQNDYSSLNVVSCSYDGTVLLWSLSQESPIGE-LEQHPQRVSKVAFHP-- 306
Query: 206 LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIK 264
N +A D R++D++ +K ++ GH+ +V V + DG V TG DC +
Sbjct: 307 -NG--HHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGR 363
Query: 265 VWETTQGKLIRELKGHGHWVNSLA-LSTEYALRTGAFDHTGKQYSSPEEMKKAALERYN- 322
VW+ G+ I L GH ++S+ + Y + TG+ D++ K + + +
Sbjct: 364 VWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTS 423
Query: 323 ---KIKGNAP-ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
+++ +A + LVS S D T+ +W QP ++ GH + V SPDGQW+ S+
Sbjct: 424 VVTRVRADAAGQYLVSASFDCTLKMWS-TTGWQPLRQLQGHDTRILCVDISPDGQWMCSS 482
Query: 379 SFDKSIKLW 387
+FD++ KLW
Sbjct: 483 AFDRTFKLW 491
Score = 258 (95.9 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 63/207 (30%), Positives = 105/207 (50%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
H + V VAF P+G LA+ D+T R++DL T+ + GH V +A+ DG +
Sbjct: 295 HPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVAL 354
Query: 167 SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
+G + WD +TG+ L GH K I + W P N ++ S D ++WD
Sbjct: 355 TGGHDCYGRVWDMRTGRCIMF-LDGHTKEIHSVEWMP---NG--YEMITGSSDNSMKVWD 408
Query: 227 VSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ +R+ + HT VT V+ G + + S DCT+K+W TT + +R+L+GH +
Sbjct: 409 LRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQPLRQLQGHDTRIL 468
Query: 286 SLALSTEYA-LRTGAFDHTGKQYSSPE 311
+ +S + + + AFD T K ++ +
Sbjct: 469 CVDISPDGQWMCSSAFDRTFKLWAQSD 495
Score = 160 (61.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 60/254 (23%), Positives = 110/254 (43%)
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP---VHLNAPCRRFV 214
+SAD +H+V+ +G + W + + GH + P + V
Sbjct: 212 FSADSEHIVTAGWSGSVAVWKREQCAQEIKFI-GHSSQAGCARFHPGAFTQNDYSSLNVV 270
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKL 273
S S DG +W +S + L H V+ V + +G + T D T ++++ T K
Sbjct: 271 SCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKE 330
Query: 274 IRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERYNKIKGNA---P 329
+ +GH V +A + ++ TG D G+ + L+ + K + P
Sbjct: 331 LLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMP 390
Query: 330 E--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
+++GS D +M +W+ + + T M H +V V GQ++ SASFD ++K+W
Sbjct: 391 NGYEMITGSSDNSMKVWDLRMRRNTYT-MPAHTSVVTRVRADAAGQYLVSASFDCTLKMW 449
Query: 388 NGTTGKFVAVFRGH 401
+ T + + +GH
Sbjct: 450 STTGWQPLRQLQGH 463
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 51/239 (21%), Positives = 96/239 (40%)
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCV--ICLSGHTLAVTCVKWGGDGVI---YTG---- 257
+A V+A G +W +C I GH+ C ++ Y+
Sbjct: 213 SADSEHIVTAGWSGSVAVW--KREQCAQEIKFIGHSSQAGCARFHPGAFTQNDYSSLNVV 270
Query: 258 --SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMK 314
S D T+ +W +Q I EL+ H V+ +A + L T FD T + Y + +
Sbjct: 271 SCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKE 330
Query: 315 KAALERYNKIKGNA---PERLVS--GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFS 369
E ++K + P+ V+ G D +W+ + + GH + ++ V +
Sbjct: 331 LLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMF-LDGHTKEIHSVEWM 389
Query: 370 PDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDM 428
P+G + + S D S+K+W+ + H V ++R + + ++F C + M
Sbjct: 390 PNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKM 448
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 225 (84.3 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 163 (62.4 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 74/285 (25%), Positives = 119/285 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVT 456
CF P+ ++ S+ W + ++++ K + +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVISTS 278
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 120 (47.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 45/157 (28%), Positives = 69/157 (43%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRF 410
S S DK+IKLWN T G K+ H V +RF
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRF 156
Score = 54 (24.1 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKV 455
C SL +WSAD + L +G D+ ++V
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRV 309
Score = 43 (20.2 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 225 (84.3 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 163 (62.4 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 74/285 (25%), Positives = 119/285 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVT 456
CF P+ ++ S+ W + ++++ K + +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVISTS 278
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 120 (47.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 45/157 (28%), Positives = 69/157 (43%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRF 410
S S DK+IKLWN T G K+ H V +RF
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRF 156
Score = 54 (24.1 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKV 455
C SL +WSAD + L +G D+ ++V
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRV 309
Score = 43 (20.2 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 225 (84.3 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 163 (62.4 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 74/285 (25%), Positives = 119/285 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVT 456
CF P+ ++ S+ W + ++++ K + +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVISTS 278
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 120 (47.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 45/157 (28%), Positives = 69/157 (43%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRF 410
S S DK+IKLWN T G K+ H V +RF
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRF 156
Score = 54 (24.1 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKV 455
C SL +WSAD + L +G D+ ++V
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRV 309
Score = 43 (20.2 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 225 (84.3 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 163 (62.4 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 74/285 (25%), Positives = 119/285 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVT 456
CF P+ ++ S+ W + ++++ K + +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVISTS 278
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 120 (47.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 45/157 (28%), Positives = 69/157 (43%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRF 410
S S DK+IKLWN T G K+ H V +RF
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRF 156
Score = 54 (24.1 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKV 455
C SL +WSAD + L +G D+ ++V
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRV 309
Score = 43 (20.2 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 225 (84.3 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 163 (62.4 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 74/285 (25%), Positives = 119/285 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVT 456
CF P+ ++ S+ W + ++++ K + +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVISTS 278
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 120 (47.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 45/157 (28%), Positives = 69/157 (43%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRF 410
S S DK+IKLWN T G K+ H V +RF
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRF 156
Score = 54 (24.1 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKV 455
C SL +WSAD + L +G D+ ++V
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRV 309
Score = 43 (20.2 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 225 (84.3 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 163 (62.4 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 74/285 (25%), Positives = 119/285 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVT 456
CF P+ ++ S+ W + ++++ K + +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVISTS 278
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 120 (47.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 45/157 (28%), Positives = 69/157 (43%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRF 410
S S DK+IKLWN T G K+ H V +RF
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRF 156
Score = 54 (24.1 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKV 455
C SL +WSAD + L +G D+ ++V
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRV 309
Score = 43 (20.2 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 225 (84.3 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 163 (62.4 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 74/285 (25%), Positives = 119/285 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVT 456
CF P+ ++ S+ W + ++++ K + +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVISTS 278
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 120 (47.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 45/157 (28%), Positives = 69/157 (43%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRF 410
S S DK+IKLWN T G K+ H V +RF
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRF 156
Score = 54 (24.1 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKV 455
C SL +WSAD + L +G D+ ++V
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRV 309
Score = 43 (20.2 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 225 (84.3 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 163 (62.4 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 74/285 (25%), Positives = 119/285 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVT 456
CF P+ ++ S+ W + ++++ K + +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVISTS 278
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 120 (47.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 45/157 (28%), Positives = 69/157 (43%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRF 410
S S DK+IKLWN T G K+ H V +RF
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRF 156
Score = 54 (24.1 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKV 455
C SL +WSAD + L +G D+ ++V
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRV 309
Score = 43 (20.2 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 225 (84.3 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 163 (62.4 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 74/285 (25%), Positives = 119/285 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVT 456
CF P+ ++ S+ W + ++++ K + +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVISTS 278
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 120 (47.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 45/157 (28%), Positives = 69/157 (43%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRF 410
S S DK+IKLWN T G K+ H V +RF
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRF 156
Score = 54 (24.1 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKV 455
C SL +WSAD + L +G D+ ++V
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRV 309
Score = 43 (20.2 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 225 (84.3 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 163 (62.4 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 74/285 (25%), Positives = 119/285 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVT 456
CF P+ ++ S+ W + ++++ K + +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVISTS 278
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 120 (47.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 45/157 (28%), Positives = 69/157 (43%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRF 410
S S DK+IKLWN T G K+ H V +RF
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRF 156
Score = 54 (24.1 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKV 455
C SL +WSAD + L +G D+ ++V
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRV 309
Score = 43 (20.2 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 260 (96.6 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 58/186 (31%), Positives = 93/186 (50%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH V FSP G AS S D T R+W ++ P+ GH + V C+ W + ++
Sbjct: 458 GHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYI 517
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+GS ++ WD QTG+ GH+ + ++ P R S +DG +W
Sbjct: 518 ATGSSDKTVRLWDVQTGE-CVRIFIGHRSMVLSLAMSP-----DGRYMASGDEDGTIMMW 571
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQG-KLIR--ELKGHG 281
D+S +C+ L GH V + + G+G ++ +GS DCT+K+W+ T KL + E G+
Sbjct: 572 DLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNS 631
Query: 282 HWVNSL 287
+ + SL
Sbjct: 632 NRLRSL 637
Score = 242 (90.2 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 79/246 (32%), Positives = 109/246 (44%)
Query: 94 IRPVNRCSATIA-GHTEAVLSVAFSPDGRQLASGSGDTTVRLWD--LNTQTPMFKCTGHK 150
I P R S T+ GH+ V S FSP G + S S DTT+RLW LN +K GH
Sbjct: 403 IGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYK--GHN 460
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
V +S G + S S + W +P ++GH + + W P N C
Sbjct: 461 YPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPL-RIMAGHLSDVDCVQWHP---N--C 514
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETT 269
+ S D R+WDV +CV GH V + DG + +G +D TI +W+ +
Sbjct: 515 NYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLS 574
Query: 270 QGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA 328
+ I L GH V SL+ S E +L +G+ D T K + K E N GN+
Sbjct: 575 TARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKN---GNS 631
Query: 329 PERLVS 334
RL S
Sbjct: 632 -NRLRS 636
Score = 187 (70.9 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 45/136 (33%), Positives = 70/136 (51%)
Query: 93 RIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNW 152
RI+P+ +AGH V V + P+ +A+GS D TVRLWD+ T + GH++
Sbjct: 491 RIQPLR----IMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSM 546
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
VL +A S DG+++ SG + G + WD T + PL GH + +S+ +
Sbjct: 547 VLSLAMSPDGRYMASGDEDGTIMMWDLSTARCI-TPLMGHNSCVWSLSY-----SGEGSL 600
Query: 213 FVSASKDGDARIWDVS 228
S S D ++WDV+
Sbjct: 601 LASGSADCTVKLWDVT 616
Score = 154 (59.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 53/218 (24%), Positives = 100/218 (45%)
Query: 182 GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTL 241
G+ S L GH + ++ P P +S+S D R+W L ++C GH
Sbjct: 407 GRRSYTLLLGHSGPVYSATFSP-----PGDFVLSSSADTTIRLWSTKLNANLVCYKGHNY 461
Query: 242 AVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--STEYALRTG 298
V ++ G + S D T ++W + + +R + GH V+ + + Y + TG
Sbjct: 462 PVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNY-IATG 520
Query: 299 AFDHTGKQYS-SPEEMKKAALERYNKIKGNA--PER--LVSGSDDFTMFLWEPAVSKQPK 353
+ D T + + E + + + + A P+ + SG +D T+ +W+ + ++
Sbjct: 521 SSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCI- 579
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
T + GH V + +S +G +AS S D ++KLW+ T+
Sbjct: 580 TPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTS 617
Score = 121 (47.7 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 44/139 (31%), Positives = 69/139 (49%)
Query: 334 SGSDDFTMFLWEPAVSK-QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
S S D T +W ++ + QP M GH V+ V + P+ ++A+ S DK+++LW+ TG
Sbjct: 477 SCSHDRTARIW--SMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTG 534
Query: 393 KFVAVFRGHVGPVYQI------RF-----ELIYCFRYP-SNFYCVVDM----SCCMSLYS 436
+ V +F GH V + R+ E + S C+ + SC SL S
Sbjct: 535 ECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSL-S 593
Query: 437 WSADSRLLLSGSKDSTLKV 455
+S + LL SGS D T+K+
Sbjct: 594 YSGEGSLLASGSADCTVKL 612
Score = 54 (24.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 115 AFSPDGRQLASGSGDTTVRLWDL 137
+ S DG +A G D+++++WD+
Sbjct: 359 SISHDGSLVAGGFSDSSIKVWDM 381
Score = 40 (19.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWD 178
N + C + S DG + G ++ WD
Sbjct: 353 NGLNCSSISHDGSLVAGGFSDSSIKVWD 380
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 224 (83.9 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 59/188 (31%), Positives = 92/188 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+SAD +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSN-PI--IVSCGWDKMVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS 290
+N+L S
Sbjct: 235 TINALCFS 242
Score = 156 (60.0 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 66/229 (28%), Positives = 99/229 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHSGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S + + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ ++ + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSN-PI-IVSCGWDKMVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG 400
KT GH +N V SPDG AS D LW+ GK + G
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 152 (58.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 67/263 (25%), Positives = 114/263 (43%)
Query: 148 GHKNWVLCIAWSADGKHLV-SGSKAGELQCWDPQTGKPS-GNP---LSGHKKWITGISWE 202
GH WV IA + ++ S S+ + W + + G P L GH +++ +
Sbjct: 13 GHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
+++ + +S S DG R+WD++ GHT V V + D I +GS+D
Sbjct: 71 ---ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDK 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTEYA---LRTGAFDHTGKQYSSPE-EMKKA 316
TIK+W T K + H WV+ + S + + + +D K ++ ++K
Sbjct: 128 TIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTN 187
Query: 317 ALER--Y-NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+ Y N + + L SG D LW+ K T G +N + FSP+
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DTINALCFSPNR 245
Query: 373 QWVASASFDKSIKLWNGTTGKFV 395
W+ +A+ SIK+W+ GK +
Sbjct: 246 YWLCAAT-GPSIKIWD-LEGKII 266
Score = 146 (56.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 53/186 (28%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C TI HTE V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDT-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ LR+ +I + C W DG ++ G D I+V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 143 (55.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 53/184 (28%), Positives = 86/184 (46%)
Query: 236 LSGHTLAVTCVKWGGD--GVIYTGSQDCTIKVW-----ETTQGKLIRELKGHGHWVNSLA 288
L GH+ VT + +I + S+D TI +W ET G R L+GH H+V+ +
Sbjct: 11 LKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 289 LSTE--YALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPER-LVSGSDDFTM 341
+S++ +AL +G++D T + + + K + +A R +VSGS D T+
Sbjct: 71 ISSDGQFAL-SGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTI 129
Query: 342 FLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ--WVASASFDKSIKLWNGTTGKFVAVFR 399
LW + + H + V+ V FSP+ + S +DK +K+WN K
Sbjct: 130 KLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHI 189
Query: 400 GHVG 403
GH G
Sbjct: 190 GHTG 193
Score = 131 (51.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ ++S S D T+ +W+ + P+ + GH V+ V S DGQ+ S S+D ++
Sbjct: 28 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQIRF 410
+LW+ TTG F GH V + F
Sbjct: 88 RLWDLTTGTTTRRFVGHTKDVLSVAF 113
Score = 58 (25.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 10/20 (50%), Positives = 18/20 (90%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
++SAD+R ++SGS+D T+K+
Sbjct: 112 AFSADNRQIVSGSRDKTIKL 131
Score = 55 (24.4 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKV 455
C SL +WSAD + L +G D+ ++V
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLIRV 309
Score = 44 (20.5 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D I++W T G
Sbjct: 291 WSADGQTLFAGYTDNLIRVWQVTIG 315
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 256 (95.2 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 81/298 (27%), Positives = 135/298 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I GH V SVAF P +GS D T+++WD+ T TGH V +A S
Sbjct: 172 IQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHT 231
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
++ S +++CWD + K + GH + ++ P L+ ++ +D R
Sbjct: 232 YMFSAGDDKQVKCWDLEQNKVIRS-YHGHLSGVYCLALHPT-LDV----LLTGGRDSVCR 285
Query: 224 IWDVSLRKCVICLSGHTLAVTCV-KWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+WD+ + + LSGH V V D + TGS D TIK W+ GK + L H
Sbjct: 286 VWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKK 345
Query: 283 WVNSLALST-EYALRTGAFDHTGKQYSSPE-EMKKAALERY----NKIKGNAPERLVSGS 336
V ++ L E A + + D+T K++S P+ E L + N + N +V+G
Sbjct: 346 SVRAMTLHPKENAFASASADNT-KKFSLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGG 404
Query: 337 DDFTMFLWEPAVS---KQPKTRMT-GHQQLVNHVY---FSPDGQWVASASFDKSIKLW 387
D+ +++ W+ +Q +T + G + +Y + G + + DK+IK+W
Sbjct: 405 DNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMW 462
Score = 185 (70.2 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 61/236 (25%), Positives = 103/236 (43%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
N+ + GH V +A P L +G D+ R+WD+ T+ +F +GH N V +
Sbjct: 250 NKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVF 309
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+V+GS ++ WD + GK L+ HKK + ++ P NA F SAS
Sbjct: 310 TRPTDPQVVTGSHDTTIKFWDLRYGKTMST-LTHHKKSVRAMTLHPKE-NA----FASAS 363
Query: 218 KDGDARIWDVSLRKCVIC---LSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLI 274
D + SL K C LS + + DGV+ TG + +I W+ G
Sbjct: 364 ADNTKKF---SLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGGDNGSIWFWDWKSGHSF 420
Query: 275 RELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPE 330
++ + V +L +E + +D+TG + + E K ++ + + + PE
Sbjct: 421 QQSETI---VQPGSLESEAGIYAACYDNTGSRLVTCEADK--TIKMWKEDENATPE 471
Score = 152 (58.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 63/267 (23%), Positives = 110/267 (41%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH E V +A S + S D V+ WDL + GH + V C+A
Sbjct: 213 TLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTL 272
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L++G + + WD +T K LSGH + + P P + V+ S D
Sbjct: 273 DVLLTGGRDSVCRVWDIRT-KMQIFALSGHDNTVCSVFTRPTD---P--QVVTGSHDTTI 326
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
+ WD+ K + L+ H +V + + + S D T K + +G+ +
Sbjct: 327 KFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNT-KKFSLPKGEFCHNMLSQQ 385
Query: 282 HWV-NSLALSTEYALRTGA-------FD-HTGKQYSSPEEM-KKAALER----YNKIKGN 327
+ N++A++ + + TG +D +G + E + + +LE Y N
Sbjct: 386 KTIINAMAVNEDGVMVTGGDNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDN 445
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKT 354
RLV+ D T+ +W+ + P+T
Sbjct: 446 TGSRLVTCEADKTIKMWKEDENATPET 472
Score = 129 (50.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 44/154 (28%), Positives = 65/154 (42%)
Query: 256 TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPE-EMK 314
TGS D TIK+W+ G L L GH V LA+S + A D KQ + E
Sbjct: 193 TGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDD--KQVKCWDLEQN 250
Query: 315 KAALERYNKIKGNA-----P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY 367
K + + G P + L++G D +W+ +K ++GH V V+
Sbjct: 251 KVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIR-TKMQIFALSGHDNTVCSVF 309
Query: 368 FSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
P V + S D +IK W+ GK ++ H
Sbjct: 310 TRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHH 343
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 259 (96.2 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 66/205 (32%), Positives = 102/205 (49%)
Query: 104 IAGHTEAVLSVAFSPD-GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H+ V S+ GR LA+G D V +W +N + TGH + + SA
Sbjct: 16 IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S D D
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLLGHKANICSLDFHPYG------SFVASGSLDTD 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WDV + C+ HT AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGH 188
Query: 281 GHWVNSLAL--STEYALRTGAFDHT 303
VN + S EY L +G+ T
Sbjct: 189 YGPVNVVEFHPSIEYLLASGSSSMT 213
Score = 201 (75.8 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 58/204 (28%), Positives = 93/204 (45%)
Query: 71 LEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSG 128
+E ++S ++ L + R+ + T+ GH + S+ F P G +ASGS
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP 188
DT ++LWD+ + +FK H V C+ +S DGK L S + ++ WD GK
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFE- 184
Query: 189 LSGHKKWITGISWEPV--HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCV 246
+GH + + + P +L A S S R WD+ V C+ V C+
Sbjct: 185 FTGHYGPVNVVEFHPSIEYLLA------SGSSSMTIRFWDLEKFHVVSCIEEEATPVRCI 238
Query: 247 KWGGDGV-IYTGSQDCTIKV--WE 267
+ DG +Y G QD +++V WE
Sbjct: 239 LFNPDGCCLYGGFQD-SLRVYGWE 261
Score = 189 (71.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 60/196 (30%), Positives = 87/196 (44%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + VW + + L GH + SL +S + L A +G E
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P + SGS D + LW+ K + H Q V
Sbjct: 94 AAKI-LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR-RKGCIFKYKSHTQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYC 424
+ FSPDG+W+ASA+ D ++KLW+ T GK + F GH GPV + F +PS Y
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEF-------HPSIEYL 204
Query: 425 VVDMSCCMSLYSWSAD 440
+ S M++ W +
Sbjct: 205 LASGSSSMTIRFWDLE 220
Score = 167 (63.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 58/219 (26%), Positives = 96/219 (43%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETT 269
R + D +W V+ CV+ L+GHT + ++ + +I GSQ +I+VW+
Sbjct: 34 RLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 93
Query: 270 QGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYN------ 322
K++R L GH + SL + + +G+ D K + + +K + +Y
Sbjct: 94 AAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW---DVRRKGCIFKYKSHTQAV 150
Query: 323 KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV-ASAS 379
+ +P+ L S +DD T+ LW+ K TGH VN V F P +++ AS S
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWDLTAGKV-MFEFTGHYGPVNVVEFHPSIEYLLASGS 209
Query: 380 FDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRY 418
+I+ W+ V+ PV I F C Y
Sbjct: 210 SSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLY 248
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 48/233 (20%), Positives = 100/233 (42%)
Query: 97 VNR--CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
VN+ C ++ GHT + S+ S + +GS ++R+WDL + GHK +
Sbjct: 50 VNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANIC 109
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ + G + SGS +++ WD + K H + + + + P +
Sbjct: 110 SLDFHPYGSFVASGSLDTDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSP-----DGKWLA 163
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGK 272
SA+ D ++WD++ K + +GH V V++ + ++ +GS TI+ W+ +
Sbjct: 164 SAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFH 223
Query: 273 LIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKI 324
++ ++ V + + + G F + + Y PE + + K+
Sbjct: 224 VVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPERCFDVVVVNWGKV 276
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 239 (89.2 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 69/230 (30%), Positives = 118/230 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQ-LASGSGDTTVRLWDLNTQTPMF-----KCTGHKNWVLCI 156
T+ HT+ V ++A D + + S D ++ LW L + + + TGH ++V +
Sbjct: 10 TMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDV 69
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
S+DG+ +SGS GEL+ WD TG+ S GH K + +++ + R+ VSA
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLATGE-STRRFVGHTKDVLSVAFSTDN-----RQIVSA 123
Query: 217 SKDGDARIWDVSLRKCVICLS---GHTLAVTCVKWGGDGVIYT---GSQDCTIKVWETTQ 270
S+D ++W+ +L +C +S GH V+CV++ + ++ T S D T+KVW
Sbjct: 124 SRDRTIKLWN-TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 182
Query: 271 GKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALE 319
KL L GH ++N++A+S + +L +G D + E K +LE
Sbjct: 183 CKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
Score = 232 (86.7 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 59/189 (31%), Positives = 96/189 (50%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D +RLWDL T + GH VL +A+S D +
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNR 118
Query: 164 HLVSGSKAGELQCWDPQTG-KPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+VS S+ ++ W+ K + + GHK+W++ + + P N VSAS D
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSP---NTLVPTIVSASWDKTV 175
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
++W++ K L+GH+ + V DG + +G +D I +W+ +GK + L+ G
Sbjct: 176 KVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-G 234
Query: 282 HWVNSLALS 290
++SL S
Sbjct: 235 SIIHSLCFS 243
Score = 187 (70.9 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 82/323 (25%), Positives = 144/323 (44%)
Query: 149 HKNWVLCIAWSADGKH-LVSGSKAGELQCWD-PQTGKPSG---NPLSGHKKWITGISWEP 203
H + V IA D +V+ S+ + W + K G ++GH ++ +
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFV-----QD 68
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
V L++ + +S S DG+ R+WD++ + GHT V V + D I + S+D T
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRT 128
Query: 263 IKVWETT-QGKL-IRELKGHGHWVNSLALSTEYALRT---GAFDHTGKQYSSPE-EMKK- 315
IK+W T + K I E GH WV+ + S + T ++D T K ++ +++
Sbjct: 129 IKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNT 188
Query: 316 -AALERYNKIKGNAPERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
A Y +P+ + SG D + LW+ A K+ + G +++ + FSP+
Sbjct: 189 LAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG--SIIHSLCFSPNR 246
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCM 432
W+ +A+ + SI++W+ + V + + + E N V+ C
Sbjct: 247 YWLCAAT-ENSIRIWDLESKSVVEDLKVDL----KAEAEKTDGSTGIGNKTKVI---YCT 298
Query: 433 SLYSWSADSRLLLSGSKDSTLKV 455
SL +WSAD L SG D ++V
Sbjct: 299 SL-NWSADGNTLFSGYTDGVIRV 320
Score = 153 (58.9 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 54/185 (29%), Positives = 89/185 (48%)
Query: 236 LSGHTLAVTCVKWGGDG--VIYTGSQDCTIKVWETTQ-----GKLIRELKGHGHWVNSLA 288
+ HT VT + D VI T S+D +I +W+ T+ G R + GH H+V +
Sbjct: 11 MCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVV 70
Query: 289 LSTE--YALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKGNA----PERLVSGSDDFTM 341
LS++ +AL +G++D + + + E + + + A ++VS S D T+
Sbjct: 71 LSSDGQFAL-SGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTI 129
Query: 342 FLWEP-AVSKQPKTRMTGHQQLVNHVYFSPDG--QWVASASFDKSIKLWNGTTGKFVAVF 398
LW K + GH++ V+ V FSP+ + SAS+DK++K+WN K
Sbjct: 130 KLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTL 189
Query: 399 RGHVG 403
GH G
Sbjct: 190 AGHSG 194
Score = 141 (54.7 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 63/221 (28%), Positives = 95/221 (42%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW-----DVSLRKCVICLSGHTLAV 243
+ H +T I+ PV N+ V++S+D +W D S ++GH+ V
Sbjct: 11 MCAHTDMVTAIA-TPVD-NSDV--IVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
V DG +GS D +++W+ G+ R GH V S+A ST+ + + + D
Sbjct: 67 QDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRD 126
Query: 302 HTGKQYSSPEEMKKAALE-----RYNKIKGNAPERLV----SGSDDFTMFLWEPAVSKQP 352
T K +++ E K E + +P LV S S D T+ +W K
Sbjct: 127 RTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR 186
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
T + GH +N V SPDG AS D I LW+ GK
Sbjct: 187 NT-LAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK 226
Score = 133 (51.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 43/142 (30%), Positives = 64/142 (45%)
Query: 97 VNRCSATIA---GHTEAVLSVAFSPDGR--QLASGSGDTTVRLWDLNTQTPMFKCTGHKN 151
+ C TI+ GH E V V FSP+ + S S D TV++W+L GH
Sbjct: 135 LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSG 194
Query: 152 WVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCR 211
++ +A S DG SG K G + WD GK + +G I + + P N R
Sbjct: 195 YLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG--SIIHSLCFSP---N---R 246
Query: 212 RFVSASKDGDARIWDVSLRKCV 233
++ A+ + RIWD+ + V
Sbjct: 247 YWLCAATENSIRIWDLESKSVV 268
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 251 (93.4 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 82/298 (27%), Positives = 143/298 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSADG 162
++GH V F P G LAS D + LW++ + GH V+ + ++ DG
Sbjct: 89 LSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 148
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L S S + WD +TG+ L GH ++ S P P + + S DG
Sbjct: 149 SMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--SCYPAR-RGP-QLVCTGSDDGTV 203
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ +K + +T V V + D +I +G D IKVW+ Q KL ++GH
Sbjct: 204 KLWDIR-KKAAVQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGH 261
Query: 281 GHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE--MK--KAALERYNK--IKGN-A 328
V L+LS+E + L + A D+T + + +P+E +K + + + K ++ + +
Sbjct: 262 ADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 321
Query: 329 PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ ++ GS D +++W+ S++ ++ GH VN + F P+ + SAS DK +
Sbjct: 322 PDGSKIAGGSADRFVYVWD-TTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRL 378
Score = 186 (70.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 65/247 (26%), Positives = 117/247 (47%)
Query: 215 SASKDGDARIWDVSLRKC--VICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQG 271
SA D +W+V C L GH+ AV + + DG ++++ S D T+ VW++ G
Sbjct: 110 SAGFDRLILLWNV-YGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG 168
Query: 272 KLIRELKGHGHWVNSL--ALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIK--- 325
+ ++ LKGH +VNS A + TG+ D T K + + KKAA++ + N +
Sbjct: 169 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW---DIRKKAAVQTFQNTYQVLA 225
Query: 326 ---GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ ++++SG D + +W+ +K T M GH V + S +G ++ S + D
Sbjct: 226 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDN 284
Query: 383 SIKLWN----GTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWS 438
++++W+ + V +F+G+V + L+ C P + S +Y W
Sbjct: 285 TVRIWDVRPFAPKERCVKIFQGNV---HNFEKNLLRCSWSPDGSK-IAGGSADRFVYVWD 340
Query: 439 ADSRLLL 445
SR +L
Sbjct: 341 TTSRRIL 347
Score = 176 (67.0 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 44/168 (26%), Positives = 82/168 (48%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
AT+ GH+ AV+ + ++ DG L S S D TV +WD T + + GH ++V +
Sbjct: 130 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 189
Query: 162 GKHLV-SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
G LV +GS G ++ WD + K + + + +++ N + +S D
Sbjct: 190 GPQLVCTGSDDGTVKLWDIR--KKAAVQTFQNTYQVLAVTF-----NDTSDQIISGGIDN 242
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE 267
D ++WD+ K + GH +VT + +G + + + D T+++W+
Sbjct: 243 DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWD 290
Score = 172 (65.6 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 66/286 (23%), Positives = 125/286 (43%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ +GH+ V C + G L S + W+ + L GH +G
Sbjct: 83 QAPIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGH----SGA 138
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV-TCVKWG-GDGVIYTG 257
E +H N SAS D +WD + V L GHT V +C G ++ TG
Sbjct: 139 VME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 197
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
S D T+K+W+ + ++ + + + V ++ + T + +G D+ K + +
Sbjct: 198 SDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 256
Query: 317 ALERY-NKIKG----NAPERLVSGSDDFTMFLWE--PAVSKQPKTRM-TGH----QQLVN 364
+ + + + G + L+S + D T+ +W+ P K+ ++ G+ ++ +
Sbjct: 257 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLL 316
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+SPDG +A S D+ + +W+ T+ + + GH G V ++ F
Sbjct: 317 RCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAF 362
Score = 136 (52.9 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 37/123 (30%), Positives = 61/123 (49%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GH---- 149
N+ + T+ GH ++V ++ S +G L S + D TVR+WD+ P +C G+
Sbjct: 252 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNF 311
Query: 150 -KNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW---EPVH 205
KN + C +WS DG + GS + WD T + L GH + +++ EP+
Sbjct: 312 EKNLLRC-SWSPDGSKIAGGSADRFVYVWDT-TSRRILYKLPGHAGSVNELAFHPEEPII 369
Query: 206 LNA 208
L+A
Sbjct: 370 LSA 372
Score = 125 (49.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 50/190 (26%), Positives = 77/190 (40%)
Query: 228 SLRKCVICLSGHTLAVTCVK---WGGDGVIYTGSQDCTIKVWETTQGKL--IRELKGHGH 282
SL+ ++ LSGH V C K WG + + D I +W G LKGH
Sbjct: 81 SLQAPIMLLSGHEGEVYCCKFHPWGN--TLASAGFDRLILLWNV-YGDCDNYATLKGHSG 137
Query: 283 WVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PERLVSG 335
V L +T+ + L + + D T + S + L+ + + P+ + +G
Sbjct: 138 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 197
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
SDD T+ LW+ +T +Q L V F+ + S D IK+W+ K
Sbjct: 198 SDDGTVKLWDIRKKAAVQTFQNTYQVLA--VTFNDTSDQIISGGIDNDIKVWDLRQNKLT 255
Query: 396 AVFRGHVGPV 405
RGH V
Sbjct: 256 YTMRGHADSV 265
Score = 37 (18.1 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 436 SWSADSRLLLSGSKD 450
SWS D + GS D
Sbjct: 319 SWSPDGSKIAGGSAD 333
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 225 (84.3 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 62 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 121
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 122 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 178
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 179 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 237
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 238 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 295
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 296 ADGQTLF 302
Score = 163 (62.4 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 74/285 (25%), Positives = 119/285 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 14 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 69
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 70 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 129
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 130 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 187
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 188 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 241
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVT 456
CF P+ ++ S+ W + ++++ K + +
Sbjct: 242 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVISTS 281
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 141 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 200
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 201 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 252
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 253 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 312
Query: 266 WETTQG 271
W+ T G
Sbjct: 313 WQVTIG 318
Score = 120 (47.3 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 45/157 (28%), Positives = 69/157 (43%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 5 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 64
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 65 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 123
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRF 410
S S DK+IKLWN T G K+ H V +RF
Sbjct: 124 VSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRF 159
Score = 54 (24.1 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKV 455
C SL +WSAD + L +G D+ ++V
Sbjct: 289 CTSL-AWSADGQTLFAGYTDNLVRV 312
Score = 43 (20.2 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 294 WSADGQTLFAGYTDNLVRVWQVTIG 318
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 236 (88.1 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 59/192 (30%), Positives = 95/192 (49%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
+T+ GH V+SV SP G +AS S D +RLWDL + + +A+S D
Sbjct: 58 STLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPD 117
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+HL +GS G++ + +TGK + L K+I I++ P + S + DG
Sbjct: 118 SQHLATGSHVGKVNIFGVETGKKEYS-LDTRGKFILSIAYSP-----DGKYLASGAIDGI 171
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGH 280
I+D++ K + L GH + + + + D ++ T S D IK++E L L GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGH 231
Query: 281 GHWVNSLALSTE 292
G WV ++A S +
Sbjct: 232 GSWVLNVAFSPD 243
Score = 206 (77.6 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 50/158 (31%), Positives = 84/158 (53%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ ++ Q + LSGH W+ +++ P + FVS+S D ++WDVS R
Sbjct: 211 DGYIKIYEVQHASLAAT-LSGHGSWVLNVAFSPDDTH-----FVSSSSDKSVKVWDVSAR 264
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
CV H V VK+ +G I + + D I V++
Sbjct: 265 TCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
Score = 194 (73.4 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 56/177 (31%), Positives = 87/177 (49%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AG +A SVAFSPD + LA+GS V ++ + T + ++L IA+S DGK+
Sbjct: 104 AGPVDA-WSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKY 162
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L SG+ G + +D TGK + L GH I +++ P + V+AS DG +I
Sbjct: 163 LASGAIDGIINIFDIATGKLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKI 216
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGH 280
++V LSGH V V + D + + S D ++KVW+ + + H
Sbjct: 217 YEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDH 273
Score = 165 (63.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 73/288 (25%), Positives = 126/288 (43%)
Query: 137 LNTQ-TPMFKCT-GHKNWVLCIAW---SADGKHLV-SGSKAGELQCWDPQTGKPS-GNPL 189
++TQ + +FK H++ + + W S DG LV SGS ++ W + + L
Sbjct: 1 MSTQYSILFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTL 60
Query: 190 SGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG 249
GH+ + + P N S+S D R+WD+ K + + + V +
Sbjct: 61 EGHQLGVVSVDVSPSG-NI----MASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFS 115
Query: 250 GDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQY 307
D + TGS + ++ GK L G ++ S+A S + L +GA D +
Sbjct: 116 PDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 308 SSPEEMKKAALERYNK-IKGN--APER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
LE + I+ +P+ LV+ SDD + ++E + T ++GH
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAAT-LSGHGSW 234
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
V +V FSPD S+S DKS+K+W+ + V F H V+ +++
Sbjct: 235 VLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKY 282
Score = 146 (56.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 32/124 (25%), Positives = 62/124 (50%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FSPD + L + S D ++++++ + +GH +WVL +A+S D
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD + + + H+ + G+ + N + VS + D +
Sbjct: 245 THFVSSSSDKSVKVWDV-SARTCVHTFLDHQDQVWGVKY-----NKNGSKIVSVADDQEI 298
Query: 223 RIWD 226
++D
Sbjct: 299 HVYD 302
Score = 134 (52.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCS--ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRL 134
S + L + +I V S AT++GH VL+VAFSPD S S D +V++
Sbjct: 199 SPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKV 258
Query: 135 WDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
WD++ +T + H++ V + ++ +G +VS + E+ +D
Sbjct: 259 WDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 223 (83.6 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 72/247 (29%), Positives = 114/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVN 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 164 (62.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 73/285 (25%), Positives = 118/285 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T +S H R F+S +D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQLS---AHAETQ-RLFLSCRRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVNVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVT 456
CF P+ ++ S+ W + ++++ K + +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVISTS 278
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 51/186 (27%), Positives = 75/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V +W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 112 (44.5 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 46/157 (29%), Positives = 66/157 (42%)
Query: 268 TTQGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV L+ T+ + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQLSAHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRF 410
S S DK+IKLWN T G K+ H V +RF
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRF 156
Score = 54 (24.1 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKV 455
C SL +WSAD + L +G D+ ++V
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRV 309
Score = 43 (20.2 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 201 (75.8 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 56/186 (30%), Positives = 87/186 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ H +AV VAF P LASGS D T+++WD GH V + +
Sbjct: 109 TLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQK 168
Query: 163 KHLVSGSKAGEL--QCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ + S + +L + WDP + LSGH ++ + + L + +SAS+DG
Sbjct: 169 GNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRF----LTSNDNHLISASRDG 224
Query: 221 DARIWDVSLRKCVICLSGHTLA-VTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELK 278
RIWDVS CV + T + + V DG + +G +D I VWE + + L
Sbjct: 225 TLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALL 284
Query: 279 GHGHWV 284
GH +++
Sbjct: 285 GHENFI 290
Score = 173 (66.0 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 61/213 (28%), Positives = 105/213 (49%)
Query: 177 WDPQTGKPSG-NPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVIC 235
W P KPS + L+ H+ +T +++ PV + S S+D +IWD L +
Sbjct: 100 WLP---KPSSTHTLTSHRDAVTCVAFHPVFTS-----LASGSEDCTIKIWDWELGEIERT 151
Query: 236 LSGHTLAVTCVKWGGD-G--VIYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLAL-- 289
L GH V+ + +GG G ++ + S D TIK+W+ ++ IR L GH H V+S+
Sbjct: 152 LKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLT 211
Query: 290 STEYALRTGAFDHTGKQYSSPE----EMKKAALERYNKIKGNAP----ERLVSGSDDFTM 341
S + L + + D T + + ++ K+A E + I+ +P + LVSG D +
Sbjct: 212 SNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESW--IRDVSPSFDGKWLVSGGRDQAI 269
Query: 342 FLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQW 374
+WE + S +PK + GH+ + F+P +
Sbjct: 270 TVWEVS-SAEPKAALLGHENFIECCVFAPPASY 301
Score = 157 (60.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 57/235 (24%), Positives = 105/235 (44%)
Query: 236 LSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH----------GHWV 284
L+ H AVTCV + + +GS+DCTIK+W+ G++ R LKGH G
Sbjct: 110 LTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKG 169
Query: 285 NSLALSTEYALRTGAFDHTGKQYSSPEEMK--KAALERYNKIKGNAPERLVSGSDDFTMF 342
N+L S L +D + K Y++ + ++ + N L+S S D T+
Sbjct: 170 NTLLASCSSDLTIKLWDPS-KDYANIRTLSGHDHSVSSVRFLTSN-DNHLISASRDGTLR 227
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
+W+ + K + + + V S DG+W+ S D++I +W ++ + A GH
Sbjct: 228 IWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHE 287
Query: 403 GPVYQIRFELIYC--FRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
I C F P+++ + ++ ++ + +G++D T+K+
Sbjct: 288 N--------FIECCVFAPPASYEHLATLAGLKKPPPATSSCEFVATGARDKTIKL 334
Score = 156 (60.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 53/202 (26%), Positives = 96/202 (47%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQ--TPMFKCTGHKNWVLCIAWSADGKH 164
H+ + + S D L S S D T+R+WD++T + K + ++W+ ++ S DGK
Sbjct: 202 HSVSSVRFLTSNDNH-LISASRDGTLRIWDVSTGFCVKVIK-SATESWIRDVSPSFDGKW 259
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV----HL------------NA 208
LVSG + + W+ + +P L GH+ +I + P HL +
Sbjct: 260 LVSGGRDQAITVWEVSSAEPKA-ALLGHENFIECCVFAPPASYEHLATLAGLKKPPPATS 318
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVT-CVKWGGDGVIYTGSQDCTIKVWE 267
C + ++D ++W+ R + L GH V V G +++ S D TI+ W+
Sbjct: 319 SCEFVATGARDKTIKLWEARGR-LIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWD 377
Query: 268 TTQ-GKLIRELKG-HGHWVNSL 287
+Q G+L++ + G H H+V+ +
Sbjct: 378 LSQEGRLVKTISGAHEHFVSCI 399
Score = 97 (39.2 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN- 388
E + +G+ D T+ LWE A + KT + GH V + F P G+++ S S DK+I+ W+
Sbjct: 321 EFVATGARDKTIKLWE-ARGRLIKT-LHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDL 378
Query: 389 GTTGKFVAVFRG 400
G+ V G
Sbjct: 379 SQEGRLVKTISG 390
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 201 (75.8 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 56/186 (30%), Positives = 87/186 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ H +AV VAF P LASGS D T+++WD GH V + +
Sbjct: 109 TLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQK 168
Query: 163 KHLVSGSKAGEL--QCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ + S + +L + WDP + LSGH ++ + + L + +SAS+DG
Sbjct: 169 GNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRF----LTSNDNHLISASRDG 224
Query: 221 DARIWDVSLRKCVICLSGHTLA-VTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELK 278
RIWDVS CV + T + + V DG + +G +D I VWE + + L
Sbjct: 225 TLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALL 284
Query: 279 GHGHWV 284
GH +++
Sbjct: 285 GHENFI 290
Score = 173 (66.0 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 61/213 (28%), Positives = 105/213 (49%)
Query: 177 WDPQTGKPSG-NPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVIC 235
W P KPS + L+ H+ +T +++ PV + S S+D +IWD L +
Sbjct: 100 WLP---KPSSTHTLTSHRDAVTCVAFHPVFTS-----LASGSEDCTIKIWDWELGEIERT 151
Query: 236 LSGHTLAVTCVKWGGD-G--VIYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLAL-- 289
L GH V+ + +GG G ++ + S D TIK+W+ ++ IR L GH H V+S+
Sbjct: 152 LKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLT 211
Query: 290 STEYALRTGAFDHTGKQYSSPE----EMKKAALERYNKIKGNAP----ERLVSGSDDFTM 341
S + L + + D T + + ++ K+A E + I+ +P + LVSG D +
Sbjct: 212 SNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESW--IRDVSPSFDGKWLVSGGRDQAI 269
Query: 342 FLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQW 374
+WE + S +PK + GH+ + F+P +
Sbjct: 270 TVWEVS-SAEPKAALLGHENFIECCVFAPPASY 301
Score = 157 (60.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 57/235 (24%), Positives = 105/235 (44%)
Query: 236 LSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH----------GHWV 284
L+ H AVTCV + + +GS+DCTIK+W+ G++ R LKGH G
Sbjct: 110 LTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKG 169
Query: 285 NSLALSTEYALRTGAFDHTGKQYSSPEEMK--KAALERYNKIKGNAPERLVSGSDDFTMF 342
N+L S L +D + K Y++ + ++ + N L+S S D T+
Sbjct: 170 NTLLASCSSDLTIKLWDPS-KDYANIRTLSGHDHSVSSVRFLTSN-DNHLISASRDGTLR 227
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
+W+ + K + + + V S DG+W+ S D++I +W ++ + A GH
Sbjct: 228 IWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHE 287
Query: 403 GPVYQIRFELIYC--FRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
I C F P+++ + ++ ++ + +G++D T+K+
Sbjct: 288 N--------FIECCVFAPPASYEHLATLAGLKKPPPATSSCEFVATGARDKTIKL 334
Score = 156 (60.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 53/202 (26%), Positives = 96/202 (47%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQ--TPMFKCTGHKNWVLCIAWSADGKH 164
H+ + + S D L S S D T+R+WD++T + K + ++W+ ++ S DGK
Sbjct: 202 HSVSSVRFLTSNDNH-LISASRDGTLRIWDVSTGFCVKVIK-SATESWIRDVSPSFDGKW 259
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV----HL------------NA 208
LVSG + + W+ + +P L GH+ +I + P HL +
Sbjct: 260 LVSGGRDQAITVWEVSSAEPKA-ALLGHENFIECCVFAPPASYEHLATLAGLKKPPPATS 318
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVT-CVKWGGDGVIYTGSQDCTIKVWE 267
C + ++D ++W+ R + L GH V V G +++ S D TI+ W+
Sbjct: 319 SCEFVATGARDKTIKLWEARGR-LIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWD 377
Query: 268 TTQ-GKLIRELKG-HGHWVNSL 287
+Q G+L++ + G H H+V+ +
Sbjct: 378 LSQEGRLVKTISGAHEHFVSCI 399
Score = 97 (39.2 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN- 388
E + +G+ D T+ LWE A + KT + GH V + F P G+++ S S DK+I+ W+
Sbjct: 321 EFVATGARDKTIKLWE-ARGRLIKT-LHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDL 378
Query: 389 GTTGKFVAVFRG 400
G+ V G
Sbjct: 379 SQEGRLVKTISG 390
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 54/183 (29%), Positives = 74/183 (40%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
H+ L V + + AS S D + + L P+ GH N V I W G L
Sbjct: 307 HSAPALDVDWQSNNT-FASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLA 365
Query: 167 SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH--LNAPCRRFV-----SASKD 219
S S L+ W + + L H K I I W P N P + SAS D
Sbjct: 366 SCSDDMTLKIWSMKQDS-CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFD 424
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELK 278
R+WDV C+ L+ H V V + DG + +GS D + +W T G L+ +
Sbjct: 425 STVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYR 484
Query: 279 GHG 281
G G
Sbjct: 485 GTG 487
Score = 166 (63.5 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 65/243 (26%), Positives = 103/243 (42%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN-------TQTPMFKCT- 147
P N+ + + GH V A++P LASGSGD+T R+W+L+ TQ + C
Sbjct: 158 PPNK-AVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIR 216
Query: 148 -GHKNW-----VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
G ++ V + W+++G L +GS G + W S L HK I + W
Sbjct: 217 EGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLAS--TLGQHKGPIFALKW 274
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDC 261
N +SA D IWD + H+ V W + + S D
Sbjct: 275 -----NKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDM 329
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER 320
I V + Q + I+ +GH + VN++ T L + + D T K +S ++ L+
Sbjct: 330 CIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQA 389
Query: 321 YNK 323
+NK
Sbjct: 390 HNK 392
Score = 140 (54.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 51/216 (23%), Positives = 86/216 (39%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
++T+ H + ++ ++ G + S D T +WD +T + H L + W +
Sbjct: 259 ASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQS 318
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-HLNAPCRRFVSASKD 219
+ + C Q +P GH + I W+P +L A C S D
Sbjct: 319 NNTFASCSTDMCIHVCKLGQD-RPI-KTFQGHTNEVNAIKWDPTGNLLASC------SDD 370
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGV-----------IYTGSQDCTIKVW 266
+IW + CV L H + +KW G G + + S D T+++W
Sbjct: 371 MTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLW 430
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ +G I L H V S+A S + L +G+FD
Sbjct: 431 DVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFD 466
Score = 138 (53.6 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S S D T+ LW+ T +T HQ+ V V FSPDG+++AS SFDK + +WN T
Sbjct: 418 LDSASFDSTVRLWDVDRGICIHT-LTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT 476
Query: 392 GKFVAVFRGHVGPVYQI 408
G V +RG G ++++
Sbjct: 477 GALVHSYRG-TGGIFEV 492
Score = 127 (49.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 31/84 (36%), Positives = 44/84 (52%)
Query: 93 RIRPVNR--CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
R+ V+R C T+ H E V SVAFSPDGR LASGS D V +W+ T + G
Sbjct: 428 RLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-T 486
Query: 151 NWVLCIAWSADGKHLVSGSKAGEL 174
+ + W+A G + + + G +
Sbjct: 487 GGIFEVCWNAAGDKVGASASDGSV 510
Score = 37 (18.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
++S D R L SGS D + +
Sbjct: 452 AFSPDGRYLASGSFDKCVHI 471
Score = 37 (18.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 8 TNNVMCLLTDPEGNPLGA 25
TN V + DP GN L +
Sbjct: 349 TNEVNAIKWDPTGNLLAS 366
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 249 (92.7 bits), Expect = 7.6e-19, P = 7.6e-19
Identities = 85/307 (27%), Positives = 147/307 (47%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW++
Sbjct: 41 PGALLQAGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC 99
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 100 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 156
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K I +T V V + D +I +G
Sbjct: 157 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQII-SGG 212
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 213 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 272
Query: 313 -MK--KAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+K + + + K ++ + +P+ ++ +GS D +++W+ S++ ++ GH +N
Sbjct: 273 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRILYKLPGHAGSIN 331
Query: 365 HVYFSPD 371
V F PD
Sbjct: 332 EVAFHPD 338
Score = 193 (73.0 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 60/213 (28%), Positives = 100/213 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GHT V S + G QL +GS D TV+LWD+ + + + + VL + ++
Sbjct: 147 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAI-QTFQNTYQVLAVTFNDTS 205
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
++SG +++ WD + K + + GH +TG+S L++ +S + D
Sbjct: 206 DQIISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLS-----LSSEGSYLLSNAMDNTV 259
Query: 223 RIWDVS----LRKCVICLSG--HTLAVTCVK--WGGDGV-IYTGSQDCTIKVWETTQGKL 273
R+WDV +CV G H ++ W DG I GS D + VW+TT ++
Sbjct: 260 RVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRI 319
Query: 274 IRELKGHGHWVNSLALST-EYALRTGAFDHTGK 305
+ +L GH +N +A E + TG F G+
Sbjct: 320 LYKLPGHAGSINEVAFHPDEPIIETG-FHRIGQ 351
Score = 188 (71.2 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 71/273 (26%), Positives = 125/273 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC--VICLSGHTLAVTCV 246
LSGH+ + + P N SA D +W+V C L GH+ AV +
Sbjct: 62 LSGHEGEVYCCKFHP---NGST--LASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMEL 115
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHT 303
+ DG ++++ S D T+ VW++ G+ ++ LKGH +VNS A + TG+ D T
Sbjct: 116 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 175
Query: 304 GKQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
K + + KKAA++ + N + + ++++SG D + +W+ +K T M
Sbjct: 176 VKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-M 231
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGPVYQIRFEL 412
GH V + S +G ++ S + D ++++W+ + V +F+G+V + L
Sbjct: 232 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV---HNFEKNL 288
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ C P S +Y W SR +L
Sbjct: 289 LRCSWSPDGSKIAAG-SADRFVYVWDTTSRRIL 320
Score = 178 (67.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 66/286 (23%), Positives = 127/286 (44%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ +GH+ V C + +G L S + W+ + L GH +G
Sbjct: 56 QAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGH----SGA 111
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV-TCVKWG-GDGVIYTG 257
E +H N SAS D +WD + V L GHT V +C G ++ TG
Sbjct: 112 VME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 170
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
S D T+K+W+ + I+ + + + V ++ + T + +G D+ K + +
Sbjct: 171 SDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 229
Query: 317 ALERY-NKIKG----NAPERLVSGSDDFTMFLWE--PAVSKQPKTRM-TGH----QQLVN 364
+ + + + G + L+S + D T+ +W+ P K+ ++ G+ ++ +
Sbjct: 230 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 289
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+SPDG +A+ S D+ + +W+ T+ + + GH G + ++ F
Sbjct: 290 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAF 335
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 252 (93.8 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 68/212 (32%), Positives = 109/212 (51%)
Query: 102 ATIAGHT-EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
A I GH V VAF P GR LA+ D++ RLWDL +T + GH V C+++ +
Sbjct: 346 ADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHS 405
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG LV+G + WD +TG+ L GH + G+ + P + + S+D
Sbjct: 406 DGSVLVTGGLDAFGRVWDLRTGRCIMF-LEGHLGAVFGVDFSPNGFH-----IATGSQDN 459
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGD--GVIYTGSQDCTIKVWETTQGKLIRELK 278
+IWD+ R+ V + HT ++ VK+ + + T S D T K+W + ++ L+
Sbjct: 460 TCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQ 519
Query: 279 GHGHWVNS--LALSTEYALRTGAFDHTGKQYS 308
GH + V S +A +++Y + T +FD T K +S
Sbjct: 520 GHDNKVISVDIAPNSQY-IATTSFDRTFKLWS 550
Score = 206 (77.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 71/260 (27%), Positives = 116/260 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQ-------LASGSGDTTVRLWDLNTQTPMFKCTGHK-NWVL 154
T+ GH V VA P + +ASG D V+LW N + + TGH + V
Sbjct: 298 TLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVS 357
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+A+ G+ L + + WD + K GH K + +S+ H + V
Sbjct: 358 KVAFHPSGRFLATACYDSSWRLWDLEQ-KTEVLHQEGHAKPVHCLSY---HSDGSV--LV 411
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKL 273
+ D R+WD+ +C++ L GH AV V + +G I TGSQD T K+W+ + +
Sbjct: 412 TGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQP 471
Query: 274 IRELKGHGHWVNSLALSTEYA--LRTGAFDHTGKQYSSPEEMKKAALERY-NKIKGN--A 328
+ + H + ++ + E L T ++D T K +S+ L+ + NK+ A
Sbjct: 472 VYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIA 531
Query: 329 P--ERLVSGSDDFTMFLWEP 346
P + + + S D T LW P
Sbjct: 532 PNSQYIATTSFDRTFKLWSP 551
Score = 172 (65.6 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 63/284 (22%), Positives = 123/284 (43%)
Query: 137 LNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI 196
L + P+ G V A+S D L++ S +G + W + L GH ++
Sbjct: 248 LQSLAPLCSQVGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELK-QTLRGHASYV 306
Query: 197 TGISWEPVHLNAPCRRFV---SASKDGDARIWDVSLRKCVICLSGHTL-AVTCVKWGGDG 252
G++ P + A V S DG ++W + + + ++GH V+ V + G
Sbjct: 307 GGVALRP-GVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSG 365
Query: 253 -VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSP 310
+ T D + ++W+ Q + +GH V+ L+ ++ + L TG D G+ +
Sbjct: 366 RFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLR 425
Query: 311 EEMKKAALERY-NKIKGN--APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNH 365
LE + + G +P + +GS D T +W+ +QP + H L++
Sbjct: 426 TGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLR-RRQPVYTIPAHTNLISD 484
Query: 366 VYFSPD-GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V + + G ++ + S+D + K+W+ T + + +GH V +
Sbjct: 485 VKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISV 528
Score = 155 (59.6 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 35/114 (30%), Positives = 56/114 (49%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R RC + GH AV V FSP+G +A+GS D T ++WDL + P++ H
Sbjct: 421 VWDLR-TGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHT 479
Query: 151 NWVLCIAWSAD-GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
N + + + + G LV+ S + W +T +P L GH + + P
Sbjct: 480 NLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPL-KTLQGHDNKVISVDIAP 532
Score = 118 (46.6 bits), Expect = 0.00081, P = 0.00081
Identities = 44/188 (23%), Positives = 79/188 (42%)
Query: 238 GHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL-----ST 291
G T V+ + D ++ T S K+W +L + L+GH +V +AL +
Sbjct: 259 GDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKAD 318
Query: 292 E---YALRTGAFDHTGKQYSSPEEMKKAAL-----ERYNKIKGNAPER-LVSGSDDFTMF 342
E A+ +G D K + E A + R +K+ + R L + D +
Sbjct: 319 EENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWR 378
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ K GH + V+ + + DG + + D ++W+ TG+ + GH+
Sbjct: 379 LWD-LEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHL 437
Query: 403 GPVYQIRF 410
G V+ + F
Sbjct: 438 GAVFGVDF 445
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 241 (89.9 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 80/298 (26%), Positives = 141/298 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSADG 162
++GH V F P+G LAS D + +W++ + GH V+ + ++ DG
Sbjct: 52 LSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDG 111
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L S S + WD +TG+ L GH ++ S P P + + S DG
Sbjct: 112 SLLFSASTDKTVCVWDSETGERVKR-LKGHTSFVN--SCFPAR-RGP-QLACTGSDDGTV 166
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ +K + +T V V + D +I +G D IKVW+ Q KLI ++GH
Sbjct: 167 KLWDIR-KKASVHTFQNTYQVLSVTFNDTSDQII-SGGIDNDIKVWDLRQNKLIYSMQGH 224
Query: 281 GHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE--MK--KAALERYNK----IKGN 327
G V L+LS + + L + + D++ + + +P+E +K + + + K +
Sbjct: 225 GDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 284
Query: 328 AP-ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
A ++ +GS D +++W+ +++ ++ GH VN V F P+ V S S DK +
Sbjct: 285 ADGSKIAAGSADRFVYIWD-TTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRL 341
Score = 178 (67.7 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 47/168 (27%), Positives = 82/168 (48%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
AT+ GH+ AV+ + ++ DG L S S D TV +WD T + + GH ++V +
Sbjct: 93 ATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARR 152
Query: 162 GKHLV-SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
G L +GS G ++ WD + K S + + ++ V N + +S D
Sbjct: 153 GPQLACTGSDDGTVKLWDIRK-KASVHTFQNTYQVLS------VTFNDTSDQIISGGIDN 205
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE 267
D ++WD+ K + + GH +VT + DG + + S D +++VW+
Sbjct: 206 DIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWD 253
Score = 171 (65.3 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 69/286 (24%), Positives = 127/286 (44%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ +GH+ V C + +G L S + W+ + L GH +G
Sbjct: 46 QAPIMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGH----SGA 101
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV-TCVKWG-GDGVIYTG 257
E +H N SAS D +WD + V L GHT V +C G + TG
Sbjct: 102 VME-LHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTG 160
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
S D T+K+W+ + + + + + V S+ + T + +G D+ K + +
Sbjct: 161 SDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIY 219
Query: 317 ALERY-NKIKG---NAP-ERLVSGSDDFTMFLWE--PAVSKQPKTRM-TGH----QQLVN 364
+++ + + + G +A L+S S D ++ +W+ P K+ ++ G+ ++ +
Sbjct: 220 SMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLL 279
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+S DG +A+ S D+ + +W+ TT + V GH G V ++ F
Sbjct: 280 RCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAF 325
Score = 162 (62.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 48/170 (28%), Positives = 80/170 (47%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
+T VLSV F+ Q+ SG D +++WDL ++ GH + V ++ SADG +L+
Sbjct: 182 NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLL 241
Query: 167 SGSKAGELQCWDPQTGKPS--------GNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
S S ++ WD + P GN + +K + SW +A + + S
Sbjct: 242 SNSMDNSVRVWDIRPFAPKERCVKIFQGN-VHNFEKNLLRCSW-----SADGSKIAAGSA 295
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE 267
D IWD + R+ V L GH +V V + + ++ +GS D + + E
Sbjct: 296 DRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYIGE 345
Score = 136 (52.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 35/115 (30%), Positives = 57/115 (49%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GH---- 149
N+ ++ GH ++V ++ S DG L S S D +VR+WD+ P +C G+
Sbjct: 215 NKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNF 274
Query: 150 -KNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
KN + C +WSADG + +GS + WD T + L GH + +++ P
Sbjct: 275 EKNLLRC-SWSADGSKIAAGSADRFVYIWDTTTRRIVYK-LPGHAGSVNEVAFHP 327
Score = 128 (50.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 54/222 (24%), Positives = 89/222 (40%)
Query: 193 KKWITGISWEPVHLNAPCRRFVSASKDGDARIW----DVSLRKCVICLSGHTLAVTCVKW 248
KK + ++ PV + P V+A++ SL+ ++ LSGH V C K+
Sbjct: 5 KKRVADMAVVPVGVKRPRTELVAAAQSQQLSAMGPPRSSSLQAPIMLLSGHEGEVYCCKF 64
Query: 249 GGDGVIYTGS-QDCTIKVWETTQG-KLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGK 305
+G S D I +W + LKGH V L +T+ +L A D T
Sbjct: 65 HPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVC 124
Query: 306 QYSSPEEMKKAALERYNKIKGNA------PERLVSGSDDFTMFLWEPAVSKQPKTRMTGH 359
+ S + L+ + + P+ +GSDD T+ LW+ + K+ +
Sbjct: 125 VWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWD--IRKKASVHTFQN 182
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V V F+ + S D IK+W+ K + +GH
Sbjct: 183 TYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGH 224
Score = 43 (20.2 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 436 SWSADSRLLLSGSKD 450
SWSAD + +GS D
Sbjct: 282 SWSADGSKIAAGSAD 296
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 229 (85.7 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 58/192 (30%), Positives = 94/192 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH V+SV SP G +AS S D +RLWDL + + +A+S D +
Sbjct: 60 LEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQ 119
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
HL +GS G++ + +TGK + L K+I I++ P + S + DG
Sbjct: 120 HLATGSHVGKVNIFGVETGKKEYS-LDTRGKFILSIAYSP-----DGKYLASGAIDGIIN 173
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
I+D++ K + L GH + + + + D ++ T S D IK+++ L L GHG
Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGS 233
Query: 283 WVNSLALSTEYA 294
WV ++A S + A
Sbjct: 234 WVLNVAFSPDDA 245
Score = 210 (79.0 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 51/158 (32%), Positives = 83/158 (52%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASD 210
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ +D Q + LSGH W+ +++ P + FVS+S D ++WDVS R
Sbjct: 211 DGYIKIYDVQHASLAAT-LSGHGSWVLNVAFSPDDAH-----FVSSSSDKSVKVWDVSAR 264
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
CV H V VK+ +G I + D I V++
Sbjct: 265 TCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
Score = 158 (60.7 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 72/291 (24%), Positives = 126/291 (43%)
Query: 137 LNTQ-TPMFKCT-GHKNWVLCIAW---SADGKHLV-SGSKAGELQCWDPQTGKPSGN-PL 189
++TQ + +FK H++ + + W S DG LV SGS ++ W + L
Sbjct: 1 MSTQYSILFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWAL 60
Query: 190 SGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG 249
GH+ + + P N S+S D R+WD+ K + + + V +
Sbjct: 61 EGHQLGVVSVDVSPSG-NI----MASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFS 115
Query: 250 GDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDH----- 302
D + TGS + ++ GK L G ++ S+A S + L +GA D
Sbjct: 116 PDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 303 ---TGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGH 359
TGK + ++ A+ + + LV+ SDD + +++ + T ++GH
Sbjct: 176 DIATGKLLHT---LEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAAT-LSGH 231
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
V +V FSPD S+S DKS+K+W+ + V F H V+ +++
Sbjct: 232 GSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKY 282
Score = 141 (54.7 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 32/124 (25%), Positives = 60/124 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FS D + L + S D ++++D+ + +GH +WVL +A+S D
Sbjct: 185 TLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD + + + H+ + G+ + N + VS D +
Sbjct: 245 AHFVSSSSDKSVKVWDV-SARTCVHTFLDHQDQVWGVKY-----NRNGSKIVSVGDDQEI 298
Query: 223 RIWD 226
++D
Sbjct: 299 HVYD 302
Score = 135 (52.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCS--ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRL 134
S + L + +I V S AT++GH VL+VAFSPD S S D +V++
Sbjct: 199 STDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKV 258
Query: 135 WDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
WD++ +T + H++ V + ++ +G +VS E+ +D
Sbjct: 259 WDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 240 (89.5 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 80 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 139
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 140 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 193
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 194 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 253
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 254 TIKMWDVSTGMCLMTLVGHDNWVRGV 279
Score = 227 (85.0 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 119 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 178
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 179 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 237
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 238 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 297
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 298 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 340
Score = 195 (73.7 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 99 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 152
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 153 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 212
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 213 VVECISWAPE 222
Score = 194 (73.4 bits), Expect = 9.7e-13, P = 9.7e-13
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 161 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 220
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 221 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 279
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 280 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 334
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 335 VDQTVKVWE 343
Score = 173 (66.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 66/229 (28%), Positives = 103/229 (44%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 99 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 157
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 158 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 211
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
++ C + P + Y + + LLSGS+D T+K+
Sbjct: 212 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 257
Score = 166 (63.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 29 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 81
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 82 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 141
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 142 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 200
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 201 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 246
Score = 151 (58.2 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 37 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 94
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 95 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 149
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 150 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 209
Query: 321 YNKI 324
+ +
Sbjct: 210 HEHV 213
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 227 (85.0 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 58/203 (28%), Positives = 92/203 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSAD 161
T+ GHT+AV +A G+QL S S D +++LWD K GH++ V + +
Sbjct: 143 TLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPT 202
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
G ++S S+ ++ WD TG GH W+ + ++ F SAS D
Sbjct: 203 GDFVLSASRDHTIKQWDISTGY-CVYTFRGHNDWV-----RMIRISNDGTLFASASLDQT 256
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGD-------G---------VIYTGSQDCTIKV 265
+W + + + L H AV CV+W D G ++++GS+D +IK
Sbjct: 257 VTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKA 316
Query: 266 WETTQGKLIRELKGHGHWVNSLA 288
W G ++ L H +WV LA
Sbjct: 317 WNINTGDVLFTLLAHENWVRGLA 339
Score = 205 (77.2 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 65/207 (31%), Positives = 95/207 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH + V F P +AS S D T+++WD T GH + V IA A GK
Sbjct: 102 LTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGK 161
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGDA 222
LVS S ++ WD L GH+ ++ +++ P FV SAS+D
Sbjct: 162 QLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTF------LPTGDFVLSASRDHTI 215
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWE--TTQGKLIRELKG 279
+ WD+S CV GH V ++ DG ++ + S D T+ VW T KL+ L+
Sbjct: 216 KQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLV--LRD 273
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQ 306
H H V + E+A T + TG+Q
Sbjct: 274 HEHAVECV----EWAPDTAYTNVTGQQ 296
Score = 199 (75.1 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 56/218 (25%), Positives = 100/218 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C ++ GH V SV F P G + S S D T++ WD++T ++ GH +WV I S
Sbjct: 183 CLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRIS 242
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP--VHLNAPCRR----- 212
DG S S + W T K + L H+ + + W P + N ++
Sbjct: 243 NDGTLFASASLDQTVTVWSFAT-KSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNS 301
Query: 213 ---FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWET 268
S S+D + W+++ + L H V + + G + + + D T++VWE
Sbjct: 302 THILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWEL 361
Query: 269 TQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+ + ++ ++ H H+V+++A T + TG+ D + K
Sbjct: 362 SAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCK 399
Score = 194 (73.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 51/184 (27%), Positives = 87/184 (47%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH + V + S DG AS S D TV +W T++ H++ V C+ W+
Sbjct: 225 CVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWA 284
Query: 160 AD-------GK-------HLV-SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
D G+ H++ SGS+ ++ W+ TG L+ H+ W+ G+++ P
Sbjct: 285 PDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLA-HENWVRGLAFHPK 343
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
+ +S + D R+W++S ++C+ + H V+ V + + TGS D +
Sbjct: 344 G-----KYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSC 398
Query: 264 KVWE 267
KVWE
Sbjct: 399 KVWE 402
Score = 186 (70.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 74/309 (23%), Positives = 131/309 (42%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
K TGH+ + + + + S S+ ++ WD +TG+ L GH + I+
Sbjct: 101 KLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLE-RTLKGHTDAVNDIA---- 155
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR-KCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
++A ++ VS S D ++WD C+ L GH V+ V + GD V+ + S+D
Sbjct: 156 -IDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVL-SASRDH 213
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPEEMKKAALER 320
TIK W+ + G + +GH WV + +S + L A D T +S + K L
Sbjct: 214 TIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRD 273
Query: 321 YN---KIKGNAPERL---VSGSD---DFTMFLWEPAVSKQPKT----------RMTGHQQ 361
+ + AP+ V+G + T L+ + + K + H+
Sbjct: 274 HEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHEN 333
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSN 421
V + F P G+++ S + DK++++W + + + H V + F F +
Sbjct: 334 WVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGS 393
Query: 422 FYCVVDMSC 430
VDMSC
Sbjct: 394 ----VDMSC 398
Score = 155 (59.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 58/204 (28%), Positives = 92/204 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVH-LNAPCRRFVSASKDGDARIWDVSLRKCVIC 235
W P+ P L+GH+ IT + + P+ + A C S+D ++WD +
Sbjct: 92 WIPRP--PETQKLTGHRLPITRVIFHPLWTIMASC------SEDATIKVWDYETGQLERT 143
Query: 236 LSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQG-KLIRELKGHGHWVNSLA-LSTE 292
L GHT AV + G + + S D +IK+W+ Q ++ LKGH H V+S+ L T
Sbjct: 144 LKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTG 203
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNK----IK-GNAPERLVSGSDDFTMFLWEPA 347
+ + + DHT KQ+ +N I+ N S S D T+ +W A
Sbjct: 204 DFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFA 263
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPD 371
+K K + H+ V V ++PD
Sbjct: 264 -TKSAKLVLRDHEHAVECVEWAPD 286
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 61/227 (26%), Positives = 96/227 (42%)
Query: 236 LSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-Y 293
L+GH L +T V + I S+D TIKVW+ G+L R LKGH VN +A+
Sbjct: 102 LTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGK 161
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYNKIKGNA--P--ERLVSGSDDFTMFLWEPA 347
L + + D + K + + K+ + + P + ++S S D T+ W+ +
Sbjct: 162 QLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDIS 221
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
T GH V + S DG ASAS D+++ +W+ T V R H V
Sbjct: 222 TGYCVYT-FRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVEC 280
Query: 408 IRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLK 454
+ + P Y V + +L SGS+D ++K
Sbjct: 281 VEWA-------PDTAYTNVT-----GQQPEGNSTHILFSGSRDRSIK 315
Score = 84 (34.6 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 27/103 (26%), Positives = 53/103 (51%)
Query: 290 STEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKGNA--PER--LVSGSDDFTMFLW 344
++ + L +G+ D + K ++ + ++ L N ++G A P+ L+S +DD T+ +W
Sbjct: 300 NSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVW 359
Query: 345 EPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
E + + K + H+ V+ V F +V + S D S K+W
Sbjct: 360 ELSAQRCMKA-IEAHEHFVSTVAFHQTSPFVITGSVDMSCKVW 401
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 253 (94.1 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 65/157 (41%), Positives = 80/157 (50%)
Query: 71 LEKHKVSVEKVLSIVYQPQAVFRIRPVN-RCSATIAGHTEAVLSVAFSPDGRQLASGSGD 129
LE H SV VL+ + V P T+ GH+ VLSVAFSPDGR LASGS D
Sbjct: 699 LEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFD 758
Query: 130 TTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPL 189
TVRLWD T + GH NWV +A+S DG+ L SGS ++ WDP TG L
Sbjct: 759 KTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQ-QTL 817
Query: 190 SGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
GH + +++ P R S S D R+WD
Sbjct: 818 RGHSDTVRSVAFSP-----DGRLLASGSFDKTVRLWD 849
Score = 240 (89.5 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 61/163 (37%), Positives = 93/163 (57%)
Query: 236 LSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YA 294
L GH+ +V W V+ +GS D T+++W+ G L + L+GH WV S+A S +
Sbjct: 699 LEGHSNSV----WA---VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRL 751
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERY-NKIKGNA--PE-RLV-SGSDDFTMFLWEPAVS 349
L +G+FD T + + + L + N ++ A P+ RL+ SGS D T+ LW+PA
Sbjct: 752 LASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATG 811
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
+T + GH V V FSPDG+ +AS SFDK+++LW+ TG
Sbjct: 812 SLQQT-LRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATG 853
Score = 204 (76.9 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 57/193 (29%), Positives = 98/193 (50%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD 251
++KW + H N+ S S D R+WD + L GH+ V V + D
Sbjct: 689 NEKWGAELQTLEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPD 748
Query: 252 G-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSS 309
G ++ +GS D T+++W+ G L + L+GH +WV S+A S + L +G+FD T + +
Sbjct: 749 GRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDP 808
Query: 310 PEEMKKAALERYNK-IKGNA--PE-RLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+ L ++ ++ A P+ RL+ SGS D T+ LW+PA +T + + V
Sbjct: 809 ATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLII--KGTVT 866
Query: 365 HVYFSPDGQWVAS 377
+ FS DG ++++
Sbjct: 867 ELQFSQDGSYIST 879
Score = 194 (73.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 42/80 (52%), Positives = 51/80 (63%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH+ V SVAFSPDGR LASGS D TVRLWD T + GH + V +A+S DG
Sbjct: 774 TLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDG 833
Query: 163 KHLVSGSKAGELQCWDPQTG 182
+ L SGS ++ WDP TG
Sbjct: 834 RLLASGSFDKTVRLWDPATG 853
Score = 174 (66.3 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 36/79 (45%), Positives = 47/79 (59%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L SGSDD T+ LW+PA +T + GH V V FSPDG+ +AS SFDK+++LW+ T
Sbjct: 710 LASGSDDETVRLWDPATGSLQQT-LEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPAT 768
Query: 392 GKFVAVFRGHVGPVYQIRF 410
G RGH V + F
Sbjct: 769 GSLQQTLRGHSNWVRSVAF 787
Score = 172 (65.6 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 35/79 (44%), Positives = 46/79 (58%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L SGS D T+ LW+PA +T + GH V V FSPDG+ +AS SFDK+++LW+ T
Sbjct: 752 LASGSFDKTVRLWDPATGSLQQT-LRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPAT 810
Query: 392 GKFVAVFRGHVGPVYQIRF 410
G RGH V + F
Sbjct: 811 GSLQQTLRGHSDTVRSVAF 829
Score = 144 (55.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 43/116 (37%), Positives = 60/116 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH++ V SVAFSPDGR LASGS D TVRLWD T T + + K V + +S DG
Sbjct: 816 TLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGT-LQQTLIIKGTVTELQFSQDG 874
Query: 163 KHLVS--GSKAGELQCWDPQTGKPS--GNPLSGHKKWIT--G--ISWEPVHLNAPC 210
++ + GS + +C + + P + L WI+ G + W P C
Sbjct: 875 SYISTNLGSLNIQSRCGNNLSSSPKMHSDILINGPDWISVNGREVLWLPPEARPSC 930
Score = 49 (22.3 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
++S D RLL SGS D T+++
Sbjct: 828 AFSPDGRLLASGSFDKTVRL 847
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 250 (93.1 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 63/196 (32%), Positives = 98/196 (50%)
Query: 104 IAGHTEAVLSVAFSPD-GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H+ V S+ GR LA+G D V +W +N + TGH + + SA
Sbjct: 16 IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S D D
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLLGHKANICSLDFHPYG------SFVASGSLDTD 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WDV + C+ HT AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGH 188
Query: 281 GHWVNSLALS-TEYAL 295
VN + +EY L
Sbjct: 189 YGPVNVVEFHPSEYPL 204
Score = 197 (74.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 56/205 (27%), Positives = 92/205 (44%)
Query: 71 LEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSG 128
+E ++S ++ L + R+ + T+ GH + S+ F P G +ASGS
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP 188
DT ++LWD+ + +FK H V C+ +S DGK L S + ++ WD GK
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFE- 184
Query: 189 LSGHKKWITGISWEPVHL---NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTC 245
+GH + + + P +P R + R WD+ V C+ V C
Sbjct: 185 FTGHYGPVNVVEFHPSEYPLAGSPVHRTI--------RFWDLEKFHVVSCIEEEATPVRC 236
Query: 246 VKWGGDGV-IYTGSQDCTIKV--WE 267
+ + DG +Y G QD +++V WE
Sbjct: 237 ILFNPDGCCLYGGFQD-SLRVYGWE 260
Score = 181 (68.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 54/166 (32%), Positives = 76/166 (45%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + VW + + L GH + SL +S + L A +G E
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P + SGS D + LW+ K + H Q V
Sbjct: 94 AAKI-LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR-RKGCIFKYKSHTQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ FSPDG+W+ASA+ D ++KLW+ T GK + F GH GPV + F
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEF 197
Score = 144 (55.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 48/232 (20%), Positives = 96/232 (41%)
Query: 97 VNR--CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
VN+ C ++ GHT + S+ S + +GS ++R+WDL + GHK +
Sbjct: 50 VNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANIC 109
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ + G + SGS +++ WD + K H + + + + P +
Sbjct: 110 SLDFHPYGSFVASGSLDTDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSP-----DGKWLA 163
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQ-DCTIKVWETTQGKL 273
SA+ D ++WD++ K + +GH V V++ GS TI+ W+ + +
Sbjct: 164 SAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSEYPLAGSPVHRTIRFWDLEKFHV 223
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKI 324
+ ++ V + + + G F + + Y PE + + K+
Sbjct: 224 VSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPERCFDVVVVNWGKV 275
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 244 (91.0 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 84/322 (26%), Positives = 141/322 (43%)
Query: 103 TIAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T GH + ++A SP D +A+G GD LW + + GHK+ V C+A+S D
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYD 124
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-HLNAPCRRFVSASKDG 220
G+ L SG G +Q +D +G L G I + W P H+ ++ S+D
Sbjct: 125 GQLLASGGLDGVVQIFDASSGTLKC-VLDGPGAGIEWVRWHPRGHI------VLAGSEDC 177
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
+W+ + SGH L VTC + DG +I TGS D ++ VW + I +KG
Sbjct: 178 SLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKG 237
Query: 280 HGHWVNSLA---LSTEYALR-TGAFD---H-----TGKQYSS-PEEMKKAALERYNKIKG 326
H + L +++ +L +G+ D H TGK SS +++
Sbjct: 238 HPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSA 297
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
P G D + +W+ S P+ + H++ V + + +++A+ + ++ +
Sbjct: 298 TIPLAATGGMDK-KLIIWDLQHST-PRF-ICEHEEGVTSLTWIGTSKYLATGCANGTVSI 354
Query: 387 WNGTTGKFVAVFRGHVGPVYQI 408
W+ G V + GH V I
Sbjct: 355 WDSLLGNCVHTYHGHQDAVQAI 376
Score = 180 (68.4 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 70/305 (22%), Positives = 131/305 (42%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT--GHKNWVLCIAW 158
+A + GH ++V +AFS DG+ LASG D V+++D ++ T KC G + + W
Sbjct: 106 AAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGT--LKCVLDGPGAGIEWVRW 163
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
G +++GS+ L W+ + N SGH +T + P + + S
Sbjct: 164 HPRGHIVLAGSEDCSLWMWNADK-EAYLNMFSGHNLNVTCGDFTP-----DGKLICTGSD 217
Query: 219 DGDARIWDVSLRKCVICLSGH---TLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLI 274
D +W+ + + + GH T +TC+ + + +GS+D ++ + GK++
Sbjct: 218 DASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVV 277
Query: 275 RELKGHGHWVNSLALSTEYAL----RTGAFDHT----GKQYSSPEEMKKAALERYNKIKG 326
L H V + S A TG D Q+S+P + + E +
Sbjct: 278 SSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICEHE-EGVTSLTW 336
Query: 327 NAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ L +G + T+ +W+ + T GHQ V + S + ++ S S D + +
Sbjct: 337 IGTSKYLATGCANGTVSIWDSLLGNCVHT-YHGHQDAVQAISVSTNTDFIVSVSVDNTAR 395
Query: 386 LWNGT 390
++ +
Sbjct: 396 VFESS 400
Score = 127 (49.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 60/277 (21%), Positives = 110/277 (39%)
Query: 1 MEIETETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISD 60
++I ++ + C+L P G + + P+ S+ + + N +K Y S
Sbjct: 137 VQIFDASSGTLKCVLDGP-GAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSG 195
Query: 61 HELLVPLGSYLEKHKV---SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFS 117
H L V G + K+ + IV+ P+ I V HTE + + +
Sbjct: 196 HNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPY----HTEGLTCLDIN 251
Query: 118 PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAG---EL 174
+ SGS D +V + ++ T + H + V C+ +S + + G +L
Sbjct: 252 SNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKL 311
Query: 175 QCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI 234
WD Q P + H++ +T ++W + + +G IWD L CV
Sbjct: 312 IIWDLQHSTPRF--ICEHEEGVTSLTWI-----GTSKYLATGCANGTVSIWDSLLGNCVH 364
Query: 235 CLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQ 270
GH AV + + I + S D T +V+E+++
Sbjct: 365 TYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESSE 401
Score = 118 (46.6 bits), Expect = 0.00051, P = 0.00051
Identities = 49/236 (20%), Positives = 102/236 (43%)
Query: 185 SGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVT 244
S + +GHK + ++ P + D A +W + L GH +V+
Sbjct: 62 SVHTFTGHKGELYALACSPTDATL----VATGGGDDKAFLWKIGNGDWAAELPGHKDSVS 117
Query: 245 CVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDH 302
C+ + DG ++ +G D +++++ + G L L G G + + + + G+ D
Sbjct: 118 CLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDC 177
Query: 303 TGKQYSSPEE--MKKAALERYNKIKGN-APE-RLV-SGSDDFTMFLWEPAVSKQPKTRMT 357
+ +++ +E + + N G+ P+ +L+ +GSDD ++ +W P + +
Sbjct: 178 SLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHI-VK 236
Query: 358 GHQ---QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
GH + + + + + S S D S+ + N TGK V+ H V ++F
Sbjct: 237 GHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKF 292
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 246 (91.7 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 62/203 (30%), Positives = 100/203 (49%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S+ HT V SV FS DG+ L + S D ++++W + Q ++ H +WV C +S
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP 154
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S+ ++ WD T K N S + + + P N C SA D
Sbjct: 155 DGRLIVSCSEDKTIKIWDT-TSKQCVNNFSDSVGFANFVDFSP---NGTC--IASAGSDH 208
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
RIWD+ + + + H+ V C+ + G + T S D T+K+ + +G+LI L+G
Sbjct: 209 AVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQG 268
Query: 280 HGHWVNSLALSTEYALRT-GAFD 301
H V +++ S + L T G D
Sbjct: 269 HTGPVFTVSFSKDGELFTSGGAD 291
Score = 239 (89.2 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 77/293 (26%), Positives = 133/293 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH A+ S FSP+ +Q+A+ S DT + LW L ++ GHK+ V + +S G L
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLL 75
Query: 166 VSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S S+ ++ W + GK S H + + + +A + V+AS+D ++
Sbjct: 76 ASASRDKTVRLWVLDRKGKSS--EFKAHTAPVRSVDF-----SADGQFLVTASEDKSIKV 128
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W + ++ + L HT V C K+ DG +I + S+D TIK+W+TT + + +
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGF 188
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERY-------NKIKGN-APERLVS 334
N + S + + DH + + M + L+ Y N + + + LV+
Sbjct: 189 ANFVDFSPNGTCIASAGSDHAVRIWDI--RMNRL-LQHYQVHSCGVNCLSFHPSGNSLVT 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GH V V FS DG+ S D + +W
Sbjct: 246 ASSDGTVKILDLVEGRLIYT-LQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 210 (79.0 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 61/217 (28%), Positives = 101/217 (46%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ ++P R + GH + V S+ FSP G LAS S D TVRLW L+ + + H
Sbjct: 44 LWSLKPHARAYRYV-GHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHT 102
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
V + +SADG+ LV+ S+ ++ W + + L H W+ + P
Sbjct: 103 APVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYS-LYRHTHWVRCAKFSP-----DG 156
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETT 269
R VS S+D +IWD + ++CV S V + +G I + D +++W+
Sbjct: 157 RLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIR 216
Query: 270 QGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGK 305
+L++ + H VN L+ +L T + D T K
Sbjct: 217 MNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVK 253
Score = 195 (73.7 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 69/275 (25%), Positives = 114/275 (41%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLS--GHKKWITGISWEPVH 205
GHK + +S + K + + S L W KP GHK +T + + P
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSL---KPHARAYRYVGHKDVVTSLQFSPQG 72
Query: 206 LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIK 264
N SAS+D R+W + + HT V V + DG + T S+D +IK
Sbjct: 73 -NL----LASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIK 127
Query: 265 VWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALERYNK 323
VW + + + L H HWV S + L D T K + + K + ++
Sbjct: 128 VWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTS---KQCVNNFSD 184
Query: 324 IKGNA------PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
G A P + S D + +W+ +++ + H VN + F P G +
Sbjct: 185 SVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQV-HSCGVNCLSFHPSGNSL 243
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+AS D ++K+ + G+ + +GH GPV+ + F
Sbjct: 244 VTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSF 278
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 42/143 (29%), Positives = 68/143 (47%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+++ + S D + LW ++ + R GH+ +V + FSP G +ASAS DK+++LW
Sbjct: 31 KQIATASWDTFLMLW--SLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWV 88
Query: 389 -GTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRYPS-NFYCVVDMSCCMSLYS---W- 437
GK + F+ H PV + F L+ S + + SLY W
Sbjct: 89 LDRKGKS-SEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWV 147
Query: 438 -----SADSRLLLSGSKDSTLKV 455
S D RL++S S+D T+K+
Sbjct: 148 RCAKFSPDGRLIVSCSEDKTIKI 170
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 245 (91.3 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 79/293 (26%), Positives = 132/293 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH A+ S+ SP+G+QLA+ S DT + LW+ ++ GHK+ V + +S G L
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLL 75
Query: 166 VSGSKAGELQCWDP-QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S S+ ++ W P + GK S H + + + +A + +AS+D ++
Sbjct: 76 ASASRDRTVRLWIPDKRGKFS--EFKAHTAPVRSVDF-----SADGQFLATASEDKSIKV 128
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W + ++ + L HT V C K+ DG +I + S+D TIK+W+TT + + +
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PER--LVS 334
N + + + + D T K + + K L+ Y G P LV+
Sbjct: 189 ANFVDFNPSGTCIASAGSDQTVKVWDV--RVNKL-LQHYQVHSGGVNCISFHPSDNYLVT 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GH V V FS G+ AS D + LW
Sbjct: 246 ASSDGTLKILDLLEGRLIYT-LQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 225 (84.3 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 77/286 (26%), Positives = 122/286 (42%)
Query: 139 TQTPMFK--CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLS--GHKK 194
T+ P+ + GHK + + S +GK L + S L W+ KP GHK
Sbjct: 5 TEDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWN---FKPHARAYRYVGHKD 61
Query: 195 WITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-V 253
+T + + P H N SAS+D R+W R HT V V + DG
Sbjct: 62 VVTSVQFSP-HGNL----LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQF 116
Query: 254 IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEE 312
+ T S+D +IKVW + + + L H HWV S + L D T K + +
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN- 175
Query: 313 MKKAALERYNKIKGNA------PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K + ++ G A P + S D T+ +W+ V+K + H VN
Sbjct: 176 --KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV-HSGGVN 232
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ F P ++ +AS D ++K+ + G+ + +GH GPV+ + F
Sbjct: 233 CISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF 278
Score = 129 (50.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 47/157 (29%), Positives = 72/157 (45%)
Query: 315 KAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQW 374
KAA+ + + N + + D F M LW + R GH+ +V V FSP G
Sbjct: 18 KAAITSLD-LSPNGKQLATASWDTFLM-LWNFKPHARAY-RYVGHKDVVTSVQFSPHGNL 74
Query: 375 VASASFDKSIKLW-NGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSN------FYCVVD 427
+ASAS D++++LW GKF + F+ H PV + F F ++ + +
Sbjct: 75 LASASRDRTVRLWIPDKRGKF-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 133
Query: 428 MSCCMSLYS---W------SADSRLLLSGSKDSTLKV 455
SLY W S D RL++S S+D T+K+
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 217 (81.4 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 70/248 (28%), Positives = 115/248 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH+ V V S DG+ SG+ D T+RLWDL T + GH VL +A+SAD
Sbjct: 58 SLKGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADN 117
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +VSGS+ ++ W+ GH +W++ + + P N P VS D
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSN-PI--IVSCGWDKMV 174
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
++W+++ K GHT + V DG + +G +D +W+ +GK + L G
Sbjct: 175 KVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDS-G 233
Query: 282 HWVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVS 334
+N+L S Y L TG +D GK +E+++ + +K + L
Sbjct: 234 DVINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELRQEVISTNSKAEPPQCTSLAW 291
Query: 335 GSDDFTMF 342
+D T+F
Sbjct: 292 SADGQTLF 299
Score = 162 (62.1 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 67/263 (25%), Positives = 118/263 (44%)
Query: 148 GHKNWVLCIAWSADGKHLV-SGSKAGELQCWDPQTGKPS-GNP---LSGHKKWITGISWE 202
GH WV IA + ++ S S+ + W + + G P L GH +++ +
Sbjct: 13 GHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVV-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
+++ + +S + DG R+WD++ GHT V V + D I +GS+D
Sbjct: 71 ---ISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDK 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTEYA---LRTGAFDHTGKQYSSPE-EMKKA 316
TIK+W T K + +GH WV+ + S + + + +D K ++ ++K
Sbjct: 128 TIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTN 187
Query: 317 ALER--Y-NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+ Y N + + L SG D LW+ K T +G ++N + FSP+
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSG--DVINALCFSPNR 245
Query: 373 QWVASASFDKSIKLWNGTTGKFV 395
W+ +A+ SIK+W+ GK +
Sbjct: 246 YWLCAAT-GPSIKIWD-LEGKII 266
Score = 156 (60.0 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 64/222 (28%), Positives = 99/222 (44%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P + + +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHSGWVTQIATTPKYPDM----ILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +G+ D T+++W+ T G R GH V S+A S + + +G+ D
Sbjct: 67 SDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEE--MKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSN-PI-IVSCGWDKMVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
KT GH +N V SPDG AS D LW+ GK
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 225
Score = 154 (59.3 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 55/184 (29%), Positives = 88/184 (47%)
Query: 236 LSGHTLAVTCVKWGGD--GVIYTGSQDCTIKVW-----ETTQGKLIRELKGHGHWVNSLA 288
L GH+ VT + +I + S+D +I +W ET G R LKGH H+V+ +
Sbjct: 11 LKGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVV 70
Query: 289 LSTE--YALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPER-LVSGSDDFTM 341
+S++ +AL +GA+D T + + + + K + +A R +VSGS D T+
Sbjct: 71 ISSDGQFAL-SGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTI 129
Query: 342 FLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ--WVASASFDKSIKLWNGTTGKFVAVFR 399
LW + + GH + V+ V FSP+ + S +DK +K+WN K
Sbjct: 130 KLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHI 189
Query: 400 GHVG 403
GH G
Sbjct: 190 GHTG 193
Score = 153 (58.9 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 55/186 (29%), Positives = 77/186 (41%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C TI GHTE V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK SG I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDV--INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ LR+ VI + C W DG ++ G D I+V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELRQEVISTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 123 (48.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ ++S S D ++ +W+ + P+ + GH V+ V S DGQ+ S ++D ++
Sbjct: 28 PDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVISSDGQFALSGAWDGTL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQIRF 410
+LW+ TTG F GH V + F
Sbjct: 88 RLWDLTTGLTTRRFVGHTKDVLSVAF 113
Score = 58 (25.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 10/20 (50%), Positives = 18/20 (90%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
++SAD+R ++SGS+D T+K+
Sbjct: 112 AFSADNRQIVSGSRDKTIKL 131
Score = 55 (24.4 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKV 455
C SL +WSAD + L +G D+ ++V
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLIRV 309
Score = 44 (20.5 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D I++W T G
Sbjct: 291 WSADGQTLFAGYTDNLIRVWQVTIG 315
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 246 (91.7 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 75/295 (25%), Positives = 129/295 (43%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
+GHT V +V P + ASG D +++WDL + TGH + V + S
Sbjct: 181 SGHTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPF 240
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L SG + +++CWD + K + GH + +S P L+ V+ ++D AR+
Sbjct: 241 LFSGGEDKQVKCWDLEYNKVIRH-YHGHLSAVQALSVHP-SLDV----LVTCARDSTARV 294
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
WD+ + V C +GHT V V D + T S D T+++W+ G+ + L H
Sbjct: 295 WDMRTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKS 354
Query: 284 VNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKI----KGNAPERLVSGSDDF 339
V +L + + A KQ+ P+ L +N I N +VSG+D+
Sbjct: 355 VRALTIHPRLNMFASASPDNIKQWKLPKGEFMQNLSGHNAIINTLSSNDDGVVVSGADNG 414
Query: 340 TMFLWE-------PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
++ W+ + +P+ + + F G + +A DK+IK++
Sbjct: 415 SLCFWDWRSGFCFQKIQTKPQPGSIESEAGIYASCFDKTGLRLITAEADKTIKMY 469
Score = 183 (69.5 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 58/219 (26%), Positives = 100/219 (45%)
Query: 190 SGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG 249
SGH W+ + EP + + F S D +IWD++ + + L+GH +V VK
Sbjct: 181 SGHTGWVRAVDVEPGN-----QWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVS 235
Query: 250 G-DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY-ALRTGAFDHTGKQY 307
+++G +D +K W+ K+IR GH V +L++ L T A D T + +
Sbjct: 236 PRHPFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVW 295
Query: 308 SSPEEMKKAALERY-NKIKG----NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
+ + + N + + ++++ S D T+ LW+ A + T +T H++
Sbjct: 296 DMRTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCT-LTHHKKS 354
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V + P ASAS D +IK W G+F+ GH
Sbjct: 355 VRALTIHPRLNMFASASPD-NIKQWKLPKGEFMQNLSGH 392
Score = 167 (63.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 47/197 (23%), Positives = 92/197 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH +V +V SP L SG D V+ WDL + GH + V ++
Sbjct: 221 SLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSL 280
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ ++ + WD +T K + +GH + + + V P + ++AS D
Sbjct: 281 DVLVTCARDSTARVWDMRT-KAQVHCFAGHTNTVADVVCQSVD---P--QVITASHDATV 334
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
R+WD++ + + L+ H +V + ++ + IK W+ +G+ ++ L GH
Sbjct: 335 RLWDLAAGRSMCTLTHHKKSVRALTIHPRLNMFASASPDNIKQWKLPKGEFMQNLSGHNA 394
Query: 283 WVNSLALSTEYALRTGA 299
+N+L+ + + + +GA
Sbjct: 395 IINTLSSNDDGVVVSGA 411
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 226 (84.6 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 69/302 (22%), Positives = 131/302 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
R T+ GH + ++ + D R L S S D + +WD T + +WV+ A+
Sbjct: 2 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 61
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPS---GNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ G + G + +T + + L GH +++ + L+ + ++
Sbjct: 62 APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF----LDD--NQIIT 115
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
+S D +WD+ + + +GH+ V + DG + +G+ D +IK+W+
Sbjct: 116 SSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCR 175
Query: 275 RELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG------- 326
+ GH +N++A YA TG+ D T + + + + N I G
Sbjct: 176 QTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS 235
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+ L++G DDF +W+ A+ + GH V+ + + DG VA+ S+D +K+
Sbjct: 236 RSGRLLLAGYDDFNCNIWD-AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 294
Query: 387 WN 388
WN
Sbjct: 295 WN 296
Score = 177 (67.4 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 69/269 (25%), Positives = 114/269 (42%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++
Sbjct: 9 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAY----- 61
Query: 207 NAPCRRFVSASK-DGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDC 261
AP FV+ D I+ + R+ + +S GHT ++C ++ D I T S D
Sbjct: 62 -APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT 120
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEM-KKAALE 319
T +W+ G+ GH V SL+L+ + +GA D + K + + M ++ +
Sbjct: 121 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 180
Query: 320 RYNKIKGNA--PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSPDG 372
+ I A P +GSDD T L++ ++ M H ++ V FS G
Sbjct: 181 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE--LLMYSHDNIICGITSVAFSRSG 238
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGH 401
+ + + D + +W+ G V GH
Sbjct: 239 RLLLAGYDDFNCNIWDAMKGDRAGVLAGH 267
Score = 136 (52.9 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 52/223 (23%), Positives = 88/223 (39%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-Y 293
L GH + + WG D ++ + SQD + +W++ + + WV + A +
Sbjct: 7 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 66
Query: 294 ALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMFL 343
+ G D+ YS + R ++ G+ ++++ S D T L
Sbjct: 67 FVACGGLDNICSIYSLKTREGNVRVSR--ELPGHTGYLSCCRFLDDNQIITSSGDTTCAL 124
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W+ +Q GH V + +PDG+ S + D SIKLW+ F GH
Sbjct: 125 WDIETGQQT-VGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 183
Query: 404 PVYQIRF-ELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ + F Y F S+ D +C L+ AD LL+
Sbjct: 184 DINAVAFFPNGYAFTTGSD-----DATC--RLFDLRADQELLM 219
Score = 37 (18.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 430 CCMSLYSWSADSRLLLSGSKD 450
C ++ ++S RLLL+G D
Sbjct: 227 CGITSVAFSRSGRLLLAGYDD 247
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 218 (81.8 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 55/189 (29%), Positives = 92/189 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH+ V S DG S S D T+RLW+L T T + GH N VL +++SAD
Sbjct: 58 SLKGHSHIVSDCVISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADN 117
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +VSGS+ ++ W+ GH +W++ + + P N P VS+ D
Sbjct: 118 RQIVSGSRDRSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQN-PV--IVSSGWDKLV 174
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
++W++S K GHT + V DG + +G +D T +W+ + K + L +
Sbjct: 175 KVWELSSCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNAND 234
Query: 282 HWVNSLALS 290
+++L S
Sbjct: 235 E-IHALVFS 242
Score = 189 (71.6 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 63/213 (29%), Positives = 104/213 (48%)
Query: 103 TIAGHTEAVLSVAFSPDG-RQLASGSGDTTVRLWDLNT-QT----PMFKCTGHKNWVLCI 156
T+ GH V S+A S + L S S D T+ +W+L +T P GH + V
Sbjct: 10 TLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDC 69
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
S+DG + +S S L+ W+ TG + GH + +S+ +A R+ VS
Sbjct: 70 VISSDGAYALSASWDKTLRLWELATGTTTRR-FVGHTNDVLSVSF-----SADNRQIVSG 123
Query: 217 SKDGDARIWDVSLRKC--VICLSGHTLAVTCVKWGGDG---VIYTGSQDCTIKVWETTQG 271
S+D ++W+ +L C I GH+ V+CV++ + VI + D +KVWE +
Sbjct: 124 SRDRSIKLWN-TLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSC 182
Query: 272 KLIRELKGHGHWVNSLALSTEYAL-RTGAFDHT 303
KL + GH ++N++ +S + +L +G D T
Sbjct: 183 KLQTDHIGHTGYINTVTISPDGSLCASGGKDGT 215
Score = 150 (57.9 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 55/215 (25%), Positives = 98/215 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T ++ + P +S+S+D IW+++ + L GH+ V
Sbjct: 11 LEGHNGWVTSLA---TSMENP-NMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIV 66
Query: 244 T-CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ CV + S D T+++WE G R GH + V S++ S + + +G+ D
Sbjct: 67 SDCVISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRD 126
Query: 302 HTGKQYSSPEEMKKAALERYNK-----IKGNA-PER--LVSGSDDFTMFLWEPAVSKQPK 353
+ K +++ + K E+ + ++ + P+ +VS D + +WE + K +
Sbjct: 127 RSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKL-Q 185
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
T GH +N V SPDG AS D + LW+
Sbjct: 186 TDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWD 220
Score = 145 (56.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 52/184 (28%), Positives = 89/184 (48%)
Query: 236 LSGHTLAVTCVKWGGDG--VIYTGSQDCTIKVW-----ETTQGKLIRELKGHGHWVNSLA 288
L GH VT + + ++ + S+D T+ +W ET+ G R LKGH H V+
Sbjct: 11 LEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCV 70
Query: 289 LSTE--YALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKG---NAPER-LVSGSDDFTM 341
+S++ YAL + ++D T + + + + + N + +A R +VSGS D ++
Sbjct: 71 ISSDGAYAL-SASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSI 129
Query: 342 FLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ--WVASASFDKSIKLWNGTTGKFVAVFR 399
LW + GH + V+ V FSP+ Q + S+ +DK +K+W ++ K
Sbjct: 130 KLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHI 189
Query: 400 GHVG 403
GH G
Sbjct: 190 GHTG 193
Score = 145 (56.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 63/247 (25%), Positives = 108/247 (43%)
Query: 148 GHKNWVLCIAWSADGKH-LVSGSKAGELQCWDPQTGKPS-GNP---LSGHKKWITGISWE 202
GH WV +A S + + L+S S+ L W+ + S G P L GH ++
Sbjct: 13 GHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCV-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
+++ +SAS D R+W+++ GHT V V + D I +GS+D
Sbjct: 71 ---ISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDR 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTEY---ALRTGAFDHTGK--QYSSPE-EMK 314
+IK+W T K KGH WV+ + S + + +D K + SS + +
Sbjct: 128 SIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTD 187
Query: 315 KAALERYNKIKGNAPERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
Y +P+ + SG D T LW+ SK + + + + ++ + FSP+
Sbjct: 188 HIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYS-LNANDE-IHALVFSPNR 245
Query: 373 QWVASAS 379
W+ +A+
Sbjct: 246 YWLCAAT 252
Score = 134 (52.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 29/86 (33%), Positives = 42/86 (48%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P L+S S D T+ +W + PK + GH +V+ S DG + SAS+DK++
Sbjct: 28 PNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCVISSDGAYALSASWDKTL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQIRF 410
+LW TG F GH V + F
Sbjct: 88 RLWELATGTTTRRFVGHTNDVLSVSF 113
Score = 56 (24.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 10/20 (50%), Positives = 18/20 (90%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
S+SAD+R ++SGS+D ++K+
Sbjct: 112 SFSADNRQIVSGSRDRSIKL 131
Score = 53 (23.7 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLK 454
C+SL +WSAD + L +G D+ ++
Sbjct: 286 CISL-AWSADGQTLFAGYTDNIIR 308
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 244 (91.0 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 79/293 (26%), Positives = 133/293 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH A+ S FSP+ +Q+A+ S DT + LW L ++ GHK+ V + +S G L
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLL 75
Query: 166 VSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S S+ ++ W + GK S H + + + +A + V+AS+D ++
Sbjct: 76 ASASRDRTVRLWVLDRKGKSS--EFKAHTAPVRSVDF-----SADGQLLVTASEDKSIKV 128
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W + ++ + L HT V C K+ DG +I + S+D TIK+W+TT + + +
Sbjct: 129 WSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERY--NKIKGNA----P--ERLVS 334
N + + + + DH K + M K L+ Y + N P LV+
Sbjct: 189 ANFVDFNPNGTCIASAGSDHAVKIWDI--RMNKL-LQHYQVHSCGVNCLSFHPLGNSLVT 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GH V V FS DG+ + S D + +W
Sbjct: 246 ASSDGTVKMLDLIEGRLIYT-LQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 241 (89.9 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 62/204 (30%), Positives = 102/204 (50%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S+ HT V SV FS DG+ L + S D ++++W + Q ++ H +WV C +S
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSP 154
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S+ ++ WD T K N S + + + P N C SA D
Sbjct: 155 DGRLIVSCSEDKTIKIWDT-TNKQCVNNFSDSVGFANFVDFNP---NGTC--IASAGSDH 208
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELK 278
+IWD+ + K + H+ V C+ + G+ ++ T S D T+K+ + +G+LI L+
Sbjct: 209 AVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLV-TASSDGTVKMLDLIEGRLIYTLQ 267
Query: 279 GHGHWVNSLALSTEYALRT-GAFD 301
GH V +++ S + L T G D
Sbjct: 268 GHTGPVFTVSFSKDGELLTSGGAD 291
Score = 195 (73.7 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 70/275 (25%), Positives = 115/275 (41%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLS--GHKKWITGISWEPVH 205
GHK + +S + K + + S L W KP GHK +T + + P
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSL---KPHARAYRYVGHKDVVTSLQFSPQG 72
Query: 206 LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIK 264
N SAS+D R+W + + HT V V + DG ++ T S+D +IK
Sbjct: 73 -NL----LASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIK 127
Query: 265 VWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALERYNK 323
VW + + + L H HWV S + L D T K + + K + ++
Sbjct: 128 VWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN---KQCVNNFSD 184
Query: 324 IKGNA------PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
G A P + S D + +W+ ++K + H VN + F P G +
Sbjct: 185 SVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQV-HSCGVNCLSFHPLGNSL 243
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+AS D ++K+ + G+ + +GH GPV+ + F
Sbjct: 244 VTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSF 278
Score = 120 (47.3 bits), Expect = 0.00039, P = 0.00039
Identities = 41/143 (28%), Positives = 68/143 (47%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+++ + S D + LW ++ + R GH+ +V + FSP G +ASAS D++++LW
Sbjct: 31 KQIATASWDTFLMLW--SLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWV 88
Query: 389 -GTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRYPS-NFYCVVDMSCCMSLYS---W- 437
GK + F+ H PV + F L+ S + + SLY W
Sbjct: 89 LDRKGKS-SEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWV 147
Query: 438 -----SADSRLLLSGSKDSTLKV 455
S D RL++S S+D T+K+
Sbjct: 148 RCAKFSPDGRLIVSCSEDKTIKI 170
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 244 (91.0 bits), Expect = 5.7e-18, P = 5.7e-18
Identities = 78/293 (26%), Positives = 132/293 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH A+ S+ SP+G+QLA+ S DT + LW+ ++ GHK+ V + +S G L
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLL 75
Query: 166 VSGSKAGELQCWDP-QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S S+ ++ W P + GK S H + + + +A + +AS+D ++
Sbjct: 76 ASASRDRTVRLWIPDKRGKFS--EFKAHTAPVRSVDF-----SADGQFLATASEDKSIKV 128
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W + ++ + L HT V C K+ DG +I + S+D TIK+W+TT + + +
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PER--LVS 334
N + + + + D T K + + K L+ Y G P L++
Sbjct: 189 ANFVDFNPSGTCIASAGSDQTVKVWDV--RVNKL-LQHYQVHSGGVNCISFHPSGNYLIT 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GH V V FS G+ AS D + LW
Sbjct: 246 ASSDGTLKILDLLEGRLIYT-LQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 231 (86.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 78/286 (27%), Positives = 123/286 (43%)
Query: 139 TQTPMFK--CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLS--GHKK 194
T+ P+ + GHK + + S +GK L + S L W+ KP GHK
Sbjct: 5 TEDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWN---FKPHARAYRYVGHKD 61
Query: 195 WITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-V 253
+T + + P H N SAS+D R+W R HT V V + DG
Sbjct: 62 VVTSVQFSP-HGNL----LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQF 116
Query: 254 IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEE 312
+ T S+D +IKVW + + + L H HWV S + L D T K + +
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN- 175
Query: 313 MKKAALERYNKIKGNA------PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K + ++ G A P + S D T+ +W+ V+K + H VN
Sbjct: 176 --KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV-HSGGVN 232
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ F P G ++ +AS D ++K+ + G+ + +GH GPV+ + F
Sbjct: 233 CISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF 278
Score = 129 (50.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 47/157 (29%), Positives = 72/157 (45%)
Query: 315 KAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQW 374
KAA+ + + N + + D F M LW + R GH+ +V V FSP G
Sbjct: 18 KAAITSLD-LSPNGKQLATASWDTFLM-LWNFKPHARAY-RYVGHKDVVTSVQFSPHGNL 74
Query: 375 VASASFDKSIKLW-NGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSN------FYCVVD 427
+ASAS D++++LW GKF + F+ H PV + F F ++ + +
Sbjct: 75 LASASRDRTVRLWIPDKRGKF-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 133
Query: 428 MSCCMSLYS---W------SADSRLLLSGSKDSTLKV 455
SLY W S D RL++S S+D T+K+
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 232 (86.7 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 73/299 (24%), Positives = 128/299 (42%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTP-MFKCTGHKNWVLCIAWSADG 162
+ GH + + F P+G L S D + +W + + +GH V+ ++ DG
Sbjct: 51 LEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDG 110
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+ + S L WD TG+ GH ++ + C S S D
Sbjct: 111 SHIFTCSTDKTLAFWDIATGQRQRR-FKGHGNFVNSVQGSRRGQQLLC----SGSDDRTI 165
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
+IWD + L VT V +G G + +G D +K+W+ + ++ L+GH
Sbjct: 166 KIWDARKKHAAHTLES-PFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHS 224
Query: 282 HWVNSLALSTEYA-LRTGAFDHT-----GKQYSSPEEMKKAALERYNKIKGN------AP 329
+ ++LS E + T A D+T + Y+ E K + + N +P
Sbjct: 225 DTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSP 284
Query: 330 --ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+++ SGS D +++W+ +++ ++ GH VN V FSP + S S DK++ L
Sbjct: 285 GSDKITSGSADRHVYIWD-VNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYL 342
Score = 206 (77.6 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 69/248 (27%), Positives = 121/248 (48%)
Query: 214 VSASKDGDARIWDVSLRKC--VICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQ 270
+S+ D IW V C V+ +SGH+ AV + DG I+T S D T+ W+
Sbjct: 71 LSSGFDRQIYIWQV-YEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIAT 129
Query: 271 GKLIRELKGHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEEMKKAALERYNKIK--- 325
G+ R KGHG++VNS+ S + L +G+ D T K + + ++ LE ++
Sbjct: 130 GQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVC 189
Query: 326 -GNAPERLVSGSDDFTMFLWEPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVASASFDKS 383
G+ E+++SG D + +W+ + KQ + GH + + SP+G ++ + + D +
Sbjct: 190 FGDTGEQVISGGIDNEVKIWD--IRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNT 247
Query: 384 IKLWNG---TTG-KFVAVFRGHVGPVYQIRFE--LIYCFRYPSNFYCVVDMSCCMSLYSW 437
+++W+ G + V VF+GH Q FE L+ C P + + S +Y W
Sbjct: 248 LRVWDVRPYAPGERCVKVFQGH-----QHNFEKNLLRCAWSPGSDK-ITSGSADRHVYIW 301
Query: 438 SADSRLLL 445
++R +L
Sbjct: 302 DVNTRRIL 309
Score = 180 (68.4 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 64/258 (24%), Positives = 119/258 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH+ AV+ F+PDG + + S D T+ WD+ T + GH N+V + S G+
Sbjct: 94 MSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQ 153
Query: 164 HLV-SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L+ SGS ++ WD + K + + L + +T + + + +S D +
Sbjct: 154 QLLCSGSDDRTIKIWDARK-KHAAHTLESPFQ-VTAVCFGDTG-----EQVISGGIDNEV 206
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWET---TQG-KLIREL 277
+IWD+ + + L GH+ +T + +G I T + D T++VW+ G + ++
Sbjct: 207 KIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVF 266
Query: 278 KGHGHWVNSLALSTEYA-----LRTGAFD-HTGK-QYSSPEEMKKAALER--YNKIKGNA 328
+GH H L ++ + +G+ D H ++ + K N + +
Sbjct: 267 QGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSP 326
Query: 329 PERLV-SGSDDFTMFLWE 345
E L+ SGS D T++L E
Sbjct: 327 KEPLILSGSSDKTLYLGE 344
Score = 140 (54.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 61/288 (21%), Positives = 116/288 (40%)
Query: 138 NTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWIT 197
N Q P+ + GH+ + + +G+ L+S ++ W + +SGH +
Sbjct: 43 NLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGH----S 98
Query: 198 GISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIY 255
G E H + S D WD++ + GH V V+ G ++
Sbjct: 99 GAVME-AHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLC 157
Query: 256 TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMK 314
+GS D TIK+W+ + L+ V ++ T + +G D+ K + ++
Sbjct: 158 SGSDDRTIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAV 216
Query: 315 KAALERYNK-IKGNA--PER--LVSGSDDFTMFLWE--PAVSKQPKTRM-TGHQQLVN-- 364
L ++ I G + PE +++ + D T+ +W+ P + ++ GHQ
Sbjct: 217 LHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKN 276
Query: 365 --HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+SP + S S D+ + +W+ T + + GH G V + F
Sbjct: 277 LLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDF 324
Score = 40 (19.1 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 437 WSADSRLLLSGSKDSTL 453
+S L+LSGS D TL
Sbjct: 324 FSPKEPLILSGSSDKTL 340
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 248 (92.4 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 82/292 (28%), Positives = 135/292 (46%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWD---LNTQTPMFKCTGHKNWVLCIAWSADGKHLVS 167
V SV +SP+G++L +G LW+ N +T + H + + + W+++ + L+S
Sbjct: 136 VYSVCWSPEGKRLITGCQTGEFTLWNGTAFNFETIL---QAHDSAIRALKWASNEQWLLS 192
Query: 168 GSKAGELQCWDPQTGKPSGNPLSGHK-KWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
+ G ++ W P + + S HK + I G+++ P + +F +AS DG AR+WD
Sbjct: 193 ADQGGYVKYWQPNMN--NAHMFSAHKDEAIRGLAFAPTDV-----KFATASDDGTARVWD 245
Query: 227 VSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCT--IKVWETTQGKLIRELKGHGHW 283
+ L GH V C+ W G+I TGS+D +K+W+ G + L+ H
Sbjct: 246 FARYTEERVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSS 305
Query: 284 VNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNK--IKGNA--P--ERL-VSG 335
V ++ + L TG DH K Y MK+ R +K + A P E L VSG
Sbjct: 306 VMAVEFNKNGNWLLTGGRDHLVKMYDI-RMMKEMRTYRAHKKEVISLAWHPIHEGLFVSG 364
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
D ++ W K+ H Q + + + P G +A+ S D + K W
Sbjct: 365 GGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILATGSNDNNTKFW 416
Score = 148 (57.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 47/190 (24%), Positives = 80/190 (42%)
Query: 97 VNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
+N A EA+ +AF+P + A+ S D T R+WD T GH V CI
Sbjct: 206 MNNAHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEERVLRGHGAEVRCI 265
Query: 157 AWSADGKHLVSGSKAGE--LQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
W + +GS+ + ++ WDP++G L HK + + + N +
Sbjct: 266 DWHPTKGLIATGSRDTQQPVKIWDPKSGSCLAT-LQEHKSSVMAVEF-----NKNGNWLL 319
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGK 272
+ +D +++D+ + K + H V + W +G+ +G D +I W K
Sbjct: 320 TGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMVDGEK 379
Query: 273 LIRELKGHGH 282
I L+ H H
Sbjct: 380 EIGLLE-HAH 388
Score = 136 (52.9 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 36/128 (28%), Positives = 58/128 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C AT+ H +V++V F+ +G L +G D V+++D+ M HK V+ +AW
Sbjct: 295 CLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWH 354
Query: 160 ADGKHL-VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-HLNAPCRRFVSAS 217
+ L VSG G + W K G H + I + W P+ H+ A + S
Sbjct: 355 PIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILA------TGS 408
Query: 218 KDGDARIW 225
D + + W
Sbjct: 409 NDNNTKFW 416
Score = 40 (19.1 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 315 KAALERYNKIKGNAPERLVSGSDDFT 340
K A ++ ++ N+ + + +GSDDFT
Sbjct: 521 KKAQRQFERMWNNS-KGIGAGSDDFT 545
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 237 (88.5 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 74/281 (26%), Positives = 125/281 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T GH+ V +FSPD + L S S DTT RLW + T + + GH V +++S G
Sbjct: 674 TFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFG 733
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ + S + W P +GH + + P ++N + S D A
Sbjct: 734 FYFATASHDRTARLWTTNHISPL-RIFTGHLSDCNTVRFHP-NINY----LATGSNDKSA 787
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
R+W++ KCV GH + V + DG ++ T +D ++ +W+ + GK ++++ GH
Sbjct: 788 RLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHT 847
Query: 282 HWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFT 340
V SL S + + L +G+ D T + + ++KKA +N P L++
Sbjct: 848 KCVYSLDFSCDGSILASGSSDCTVRLW----DVKKA----FNSSLSTQPSSLINDESRKR 899
Query: 341 MFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
L S + Q V +V FS +AS +F+
Sbjct: 900 KTLKSKLFSDELLETYPTKQTPVYNVCFSRRNLLLASGAFN 940
Score = 173 (66.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 61/230 (26%), Positives = 105/230 (45%)
Query: 167 SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
S S + +LQ Q + GH + G S+ P + +S S+D AR+W
Sbjct: 656 SSSSSNKLQ---KQQKESEFKTFLGHSGPVYGCSFSP-----DSQYLLSCSEDTTARLWS 707
Query: 227 VSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ ++C GH V V + G + T S D T ++W T +R GH N
Sbjct: 708 METMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCN 767
Query: 286 SLAL--STEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKGNA--PE-RLVS-GSDD 338
++ + Y L TG+ D + + + + + + I A P+ RL++ +D
Sbjct: 768 TVRFHPNINY-LATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGED 826
Query: 339 FTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
++ LW+ + K+ K +M GH + V + FS DG +AS S D +++LW+
Sbjct: 827 TSVILWDLSTGKKVK-KMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWD 875
Score = 165 (63.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 34/80 (42%), Positives = 45/80 (56%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C GH + +VAFSPDGR LA+ DT+V LWDL+T + K GH V + +
Sbjct: 796 KCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDF 855
Query: 159 SADGKHLVSGSKAGELQCWD 178
S DG L SGS ++ WD
Sbjct: 856 SCDGSILASGSSDCTVRLWD 875
Score = 144 (55.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 57/232 (24%), Positives = 102/232 (43%)
Query: 123 LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTG 182
L SGS ++ +L ++ GH V ++S D ++L+S S+ + W +T
Sbjct: 652 LNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMET- 710
Query: 183 KPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLA 242
+ GH + +S+ P F +AS D AR+W + + +GH
Sbjct: 711 MSNLVCYKGHNFPVWDVSFSPFGFY-----FATASHDRTARLWTTNHISPLRIFTGHLSD 765
Query: 243 VTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFD 301
V++ + + TGS D + ++WE GK +R GH + ++A S + L A +
Sbjct: 766 CNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGE 825
Query: 302 HTGK---QYSSPEEMKKAALERYNKIKGNAP-----ERLVSGSDDFTMFLWE 345
T S+ +++KK ++ + K + L SGS D T+ LW+
Sbjct: 826 DTSVILWDLSTGKKVKK--MDGHTKCVYSLDFSCDGSILASGSSDCTVRLWD 875
Score = 130 (50.8 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 41/137 (29%), Positives = 59/137 (43%)
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
+ S D T LW P TGH N V F P+ ++A+ S DKS +LW TGK
Sbjct: 738 TASHDRTARLWTTN-HISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGK 796
Query: 394 FVAVFRGHVGPVYQIRFE---LIYCFRYPSNFYCVVDMSC------------CMSLYSWS 438
V +F GH P+Y + F + + D+S C+ +S
Sbjct: 797 CVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFS 856
Query: 439 ADSRLLLSGSKDSTLKV 455
D +L SGS D T+++
Sbjct: 857 CDGSILASGSSDCTVRL 873
Score = 111 (44.1 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 39/157 (24%), Positives = 64/157 (40%)
Query: 257 GSQDCTIKVW---ETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEM 313
G D ++K+W E + +L ++ + + G F + SS M
Sbjct: 576 GFSDSSVKIWNLKEMKEQRLQQQQQQQQQQQQQQNSNQNGYFENGNFASSASSASSA--M 633
Query: 314 KKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ 373
+ N A L SGS + L + + KT + GH V FSPD Q
Sbjct: 634 NGSGNNNENNKSTTANNNLNSGSSSSSNKLQKQQKESEFKTFL-GHSGPVYGCSFSPDSQ 692
Query: 374 WVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
++ S S D + +LW+ T + ++GH PV+ + F
Sbjct: 693 YLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSF 729
Score = 58 (25.5 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 29/125 (23%), Positives = 55/125 (44%)
Query: 15 LTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAF--YISDHELLVPLGSYLE 72
LTDP PL P+ P P S + KL ++K +S E VP+ + E
Sbjct: 469 LTDPNA-PL-PPVVAPPPP-PPPTSGYIPKLKKKDKKKKEVKDERMSKIESNVPIPNLTE 525
Query: 73 KHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTV 132
+ + +++ + ++ + C TI + + + S D + +A G D++V
Sbjct: 526 RFE---NELMEDFTKCVSLSSSHLPSICFYTIFNTYQGLNTTDISKDAQLVAGGFSDSSV 582
Query: 133 RLWDL 137
++W+L
Sbjct: 583 KIWNL 587
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 249 (92.7 bits), Expect = 7.3e-18, P = 7.3e-18
Identities = 71/276 (25%), Positives = 129/276 (46%)
Query: 121 RQLASGSGDTTVRLWDLN-TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDP 179
R L +G D V LW + T +PM C GH + V +A++++ +++G+ +G ++ WD
Sbjct: 29 RLLLTGGDDYKVNLWSIGKTTSPMSLC-GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDL 87
Query: 180 QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGH 239
+ K +GH+ + + + P S S D + R+WD + C+ GH
Sbjct: 88 EESKMV-RAFTGHRSNCSAVEFHPFG-----EFLASGSSDTNLRVWDTRKKGCIQTYKGH 141
Query: 240 TLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST-EYALRT 297
T ++ +++ DG + +G D +KVW+ T GKL+ E K H + SL E+ L T
Sbjct: 142 TRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLAT 201
Query: 298 GAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PE--RLVSGSDD-FTMFLWEPAVSKQ 351
G+ D T K + E+ ++ A P+ L G DD ++ WEP + +
Sbjct: 202 GSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVYSWEPVICRD 261
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
G L + + +G+++ + + S+ +W
Sbjct: 262 GVDM--GWSTLGD--FCINEGKFIGCSYYRNSVGIW 293
Score = 177 (67.4 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 53/180 (29%), Positives = 86/180 (47%)
Query: 239 HTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL- 295
H+ V C+ G ++ TG D + +W + L GH V+S+A ++E L
Sbjct: 14 HSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLV 73
Query: 296 RTGAFDHTGKQYSSPE-EMKKAAL-ERYN--KIKGNA-PERLVSGSDDFTMFLWEPAVSK 350
GA K + E +M +A R N ++ + E L SGS D + +W+
Sbjct: 74 LAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKG 133
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+T GH + ++ + FSPDG+WV S D +K+W+ T GK + F+ H GP+ + F
Sbjct: 134 CIQT-YKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDF 192
Score = 174 (66.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 53/207 (25%), Positives = 91/207 (43%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GHT V SVAF+ + + +G+ ++LWDL + TGH++ + + G
Sbjct: 53 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG 112
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ L SGS L+ WD + K GH + I+ I + P R VS D
Sbjct: 113 EFLASGSSDTNLRVWDTRK-KGCIQTYKGHTRGISTIEFSP-----DGRWVVSGGLDNVV 166
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WD++ K + H + + + + ++ TGS D T+K W+ +LI +
Sbjct: 167 KVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEA 226
Query: 282 HWVNSLALSTEYALRTGAFDHTGKQYS 308
V ++A + D K YS
Sbjct: 227 TGVRAIAFHPDGQTLFCGLDDGLKVYS 253
Score = 156 (60.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 50/194 (25%), Positives = 81/194 (41%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSATIA--GHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
E+VL + V ++ + A GH +V F P G LASGS DT +R+WD
Sbjct: 69 EEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWD 128
Query: 137 LNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI 196
+ + GH + I +S DG+ +VSG ++ WD GK + H+ I
Sbjct: 129 TRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLL-HEFKCHEGPI 187
Query: 197 TGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIY 255
+ + P+ + S D + WD+ + + V + + DG ++
Sbjct: 188 RSLDFHPLEF-----LLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLF 242
Query: 256 TGSQDCTIKV--WE 267
G D +KV WE
Sbjct: 243 CGLDD-GLKVYSWE 255
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 52/240 (21%), Positives = 100/240 (41%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETT 269
R ++ D +W + + L GHT V V + + V + G+ IK+W+
Sbjct: 29 RLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLE 88
Query: 270 QGKLIRELKGHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEEMKKAALERYN-KIKG 326
+ K++R GH +++ E+ L +G+ D + + + KK ++ Y +G
Sbjct: 89 ESKMVRAFTGHRSNCSAVEFHPFGEF-LASGSSDTNLRVWDT---RKKGCIQTYKGHTRG 144
Query: 327 NA-----PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ P+ +VSG D + +W+ K H+ + + F P +A+ S
Sbjct: 145 ISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLH-EFKCHEGPIRSLDFHPLEFLLATGS 203
Query: 380 FDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSN--FYCVVDMSCCMSLYSW 437
D+++K W+ T + + R V I F +P +C +D + +YSW
Sbjct: 204 ADRTVKFWDLETFELIGTTRPEATGVRAIAF-------HPDGQTLFCGLDDG--LKVYSW 254
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 243 (90.6 bits), Expect = 7.9e-18, P = 7.9e-18
Identities = 74/293 (25%), Positives = 135/293 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH + + F+P+ +QLA+GS D ++ +W+L + F+ GH + + + ++ G +
Sbjct: 16 GHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLV 75
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
S S+ ++ W P K H S VH + +R V+AS D ++W
Sbjct: 76 ASSSRDQTVRLWTPSI-KGESTVFKAHTA-----SVRSVHFSRDGQRLVTASDDKSVKVW 129
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
V +K + L+ HT V C ++ DG +I + D T+++W+T+ + I +G
Sbjct: 130 GVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSA 189
Query: 285 NSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG---NA----PER--LVS 334
+ S+ + + D+T K + +++ L ++ K+ N P L+S
Sbjct: 190 TFVDFNSSGTCIASSGADNTIKIW----DIRTNKLIQHYKVHNAGVNCFSFHPSGNYLIS 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
GS D T+ + + + T + GH+ V V FS DG AS D + +W
Sbjct: 246 GSSDSTIKILDLLEGRLIYT-LHGHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Score = 224 (83.9 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 64/220 (29%), Positives = 102/220 (46%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW--DLNTQTPMFKCTG 148
++ + P R + GHT+ + V F+P G +AS S D TVRLW + ++ +FK
Sbjct: 44 IWNLAPKARAFRFV-GHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKA-- 100
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA 208
H V + +S DG+ LV+ S ++ W + K + L+ H W+ + P
Sbjct: 101 HTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYS-LNRHTNWVRCARFSP----- 154
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
R S D R+WD S +C+ + + + T V + G I + D TIK+W+
Sbjct: 155 DGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWD 214
Query: 268 TTQGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGK 305
KLI+ K H VN + S Y + +G+ D T K
Sbjct: 215 IRTNKLIQHYKVHNAGVNCFSFHPSGNYLI-SGSSDSTIK 253
Score = 223 (83.6 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 71/271 (26%), Positives = 115/271 (42%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GHK+ + C ++ + K L +GS L W+ K GH ITG+++
Sbjct: 16 GHKDVISCADFNPNNKQLATGSCDKSLMIWN-LAPKARAFRFVGHTDVITGVNF------ 68
Query: 208 APCRRFV-SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV 265
AP V S+S+D R+W S++ HT +V V + DG + T S D ++KV
Sbjct: 69 APSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKV 128
Query: 266 WETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFD-HTGKQYSSPEEMKKAALERYNK- 323
W + K + L H +WV S + L D T + + + Y
Sbjct: 129 WGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGS 188
Query: 324 ---IKGNAPERLVSGSD-DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ N+ ++ S D T+ +W+ +K + H VN F P G ++ S S
Sbjct: 189 ATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKV-HNAGVNCFSFHPSGNYLISGS 247
Query: 380 FDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
D +IK+ + G+ + GH GPV + F
Sbjct: 248 SDSTIKILDLLEGRLIYTLHGHKGPVLTVTF 278
Score = 216 (81.1 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 53/181 (29%), Positives = 85/181 (46%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT +V SV FS DG++L + S D +V++W + + ++ H NWV C +S
Sbjct: 95 STVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSP 154
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ + S ++ WD + + N + + G S V N+ S+ D
Sbjct: 155 DGRLIASCGDDRTVRLWDTSSHQCI-NIFTDY-----GGSATFVDFNSSGTCIASSGADN 208
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
+IWD+ K + H V C + G + +GS D TIK+ + +G+LI L G
Sbjct: 209 TIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHG 268
Query: 280 H 280
H
Sbjct: 269 H 269
Score = 126 (49.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 47/144 (32%), Positives = 67/144 (46%)
Query: 273 LIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKG-N-A 328
L R KGH ++ + L TG+ D + ++ +P+ + + I G N A
Sbjct: 10 LERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFA 69
Query: 329 PE-RLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
P LV S S D T+ LW P++ K T H V V+FS DGQ + +AS DKS+K+
Sbjct: 70 PSGSLVASSSRDQTVRLWTPSI-KGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKV 128
Query: 387 WNGTTGKFVAVFRGHVGPVYQIRF 410
W KF+ H V RF
Sbjct: 129 WGVERKKFLYSLNRHTNWVRCARF 152
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 231 (86.4 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
Identities = 81/313 (25%), Positives = 136/313 (43%)
Query: 89 QAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-T 147
QA R+ + ++GH+ + F+ G+ +ASGS D ++ LW N + +
Sbjct: 41 QAAPRLSSLQAPLMELSGHSGEIFCAKFNSAGQYIASGSMDRSILLWRANGDCENYGILS 100
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GH+ +L + WS D + S S L WD TG+ + GH++ I + +
Sbjct: 101 GHRGAILDLQWSRDSDIIFSASADMHLASWDLTTGERIRRYV-GHEEVINSLD---ISKR 156
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVW 266
F S S DG IWD + + VT V G IY+G D IKVW
Sbjct: 157 GEEILF-SGSDDGTIGIWDPRKKHAADYIESD-FPVTAVAISEAGNEIYSGGIDNDIKVW 214
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYS----SPEEMKKAALE-- 319
+ + ++ + GH + +L +S + +L + A D T + + +P E +
Sbjct: 215 DVRKKAVVYNMAGHRDTITTLKVSPDSQSLLSYAMDSTARTWDIRPFAPTERHIRTFDGA 274
Query: 320 ----RYNKIKGN---APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
N ++G +R+ G+ D T+ +W K ++ GH+ VN V FSP
Sbjct: 275 PMGIEKNLVRGGWDKEGKRVAMGAADGTVVIWSNETGKLTY-KLPGHKAAVNCVEFSPGT 333
Query: 373 Q-WVASASFDKSI 384
+ + S S DK++
Sbjct: 334 EPLILSGSSDKTL 346
Score = 162 (62.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 45/167 (26%), Positives = 76/167 (45%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
V +VA S G ++ SG D +++WD+ + ++ GH++ + + S D + L+S +
Sbjct: 190 VTAVAISEAGNEIYSGGIDNDIKVWDVRKKAVVYNMAGHRDTITTLKVSPDSQSLLSYAM 249
Query: 171 AGELQCWDPQTGKPS--------GNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ WD + P+ G P+ K + G W+ +R + DG
Sbjct: 250 DSTARTWDIRPFAPTERHIRTFDGAPMGIEKNLVRG-GWDKEG-----KRVAMGAADGTV 303
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDCTIKVWE 267
IW K L GH AV CV++ G + +I +GS D T+ V E
Sbjct: 304 VIWSNETGKLTYKLPGHKAAVNCVEFSPGTEPLILSGSSDKTLLVGE 350
Score = 149 (57.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 65/292 (22%), Positives = 124/292 (42%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ + +GH + C +++ G+++ SGS + W + LSGH+ I +
Sbjct: 50 QAPLMELSGHSGEIFCAKFNSAGQYIASGSMDRSILLWRANGDCENYGILSGHRGAILDL 109
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTC--VKWGGDGVIYTG 257
W + SAS D WD++ + + GH + + G+ ++++G
Sbjct: 110 QW-----SRDSDIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRGEEILFSG 164
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKA 316
S D TI +W+ + K + V ++A+S + +G D+ K + + KKA
Sbjct: 165 SDDGTIGIWDPRK-KHAADYIESDFPVTAVAISEAGNEIYSGGIDNDIKVW---DVRKKA 220
Query: 317 ALERYNKIKGN---------APER--LVSGSDDFTMFLWE--PAVSKQPKTRM-----TG 358
+ YN + G+ +P+ L+S + D T W+ P + R G
Sbjct: 221 VV--YN-MAGHRDTITTLKVSPDSQSLLSYAMDSTARTWDIRPFAPTERHIRTFDGAPMG 277
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
++ + + +G+ VA + D ++ +W+ TGK GH V + F
Sbjct: 278 IEKNLVRGGWDKEGKRVAMGAADGTVVIWSNETGKLTYKLPGHKAAVNCVEF 329
Score = 41 (19.5 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 443 LLLSGSKDSTLKV 455
L+LSGS D TL V
Sbjct: 336 LILSGSSDKTLLV 348
>UNIPROTKB|Q3SZK1 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9913 "Bos taurus" [GO:0045766 "positive regulation of
angiogenesis" evidence=NAS] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=IMP] [GO:0014909 "smooth
muscle cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BC102815 IPI:IPI00693899
RefSeq:NP_001070463.1 UniGene:Bt.20293 ProteinModelPortal:Q3SZK1
STRING:Q3SZK1 PRIDE:Q3SZK1 Ensembl:ENSBTAT00000005126 GeneID:767919
KEGG:bta:767919 CTD:14 GeneTree:ENSGT00690000102167
HOGENOM:HOG000261676 HOVERGEN:HBG061307 InParanoid:Q3SZK1
OMA:VWSFEVG OrthoDB:EOG4D26PX NextBio:20918276 ArrayExpress:Q3SZK1
GO:GO:0001525 GO:GO:0045766 GO:GO:0010595 GO:GO:0014909
Uniprot:Q3SZK1
Length = 434
Score = 241 (89.9 bits), Expect = 8.8e-18, P = 8.8e-18
Identities = 89/349 (25%), Positives = 150/349 (42%)
Query: 85 VYQPQ--AVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQT 141
V +PQ V + + T A H+ +V V+ P LA +G D +W L+
Sbjct: 66 VLEPQEGVVGSMEGPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGE 125
Query: 142 PMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
+F+C GHK+ V C +S D + +G +G L+ W T + + +G +W+ W
Sbjct: 126 LLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEWM---EW 182
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
P AP ++ + DG+ +W V C G TC + DG G +D
Sbjct: 183 HP---RAPV--LLAGTADGNTWMWKVPTGDCKT-FQGPNCPATCGRVLPDGKRAVVGYED 236
Query: 261 CTIKVWETTQGKLIRELKG-HGHW--VNSLALSTEYAL-RTGAFDHTGKQYSS------- 309
TI++W+ QG I LKG GH + +A + + +L TG+ D K S+
Sbjct: 237 GTIRIWDLKQGNSIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAKLVSATTGKVVG 296
Query: 310 ---PEEM-KKAALERYNKIKGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRM 356
PE + + +L + + N+ E L G D T+ +++ +S Q
Sbjct: 297 VFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIYD--LSTQTLRHQ 354
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
HQ + + + V + S D ++LW+ TG+ + +RGH +
Sbjct: 355 CQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEI 403
Score = 164 (62.8 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 55/204 (26%), Positives = 92/204 (45%)
Query: 118 PDGRQLASGSGDTTVRLWDLN--TQTPMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGEL 174
PDG++ G D T+R+WDL + K T GH+ + C+A + DG +++GS +
Sbjct: 225 PDGKRAVVGYEDGTIRIWDLKQGNSIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQA 284
Query: 175 QCWDPQTGKPSG--NPLSGHKKWITGISWEPVHLNAPCRRFVSASK-------DGDARIW 225
+ TGK G P + + G E + F S DG I+
Sbjct: 285 KLVSATTGKVVGVFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIY 344
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
D+S + + H + + W G V+YT S D +++W+ G+L+ + +GH +
Sbjct: 345 DLSTQT-LRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEI 403
Query: 285 NSLALSTEYALR-TGAFDHTGKQY 307
ALS + +L T + DH K +
Sbjct: 404 LDFALSKDASLVVTTSGDHKAKVF 427
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 240 (89.5 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 227 (85.0 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 195 (73.7 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 194 (73.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 66/229 (28%), Positives = 103/229 (44%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
++ C + P + Y + + LLSGS+D T+K+
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 240 (89.5 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 227 (85.0 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 195 (73.7 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 194 (73.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 66/229 (28%), Positives = 103/229 (44%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
++ C + P + Y + + LLSGS+D T+K+
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 240 (89.5 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 227 (85.0 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 195 (73.7 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 194 (73.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 66/229 (28%), Positives = 103/229 (44%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
++ C + P + Y + + LLSGS+D T+K+
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 240 (89.5 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 227 (85.0 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 195 (73.7 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 194 (73.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 66/229 (28%), Positives = 103/229 (44%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
++ C + P + Y + + LLSGS+D T+K+
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 240 (89.5 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 227 (85.0 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 195 (73.7 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 194 (73.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 66/229 (28%), Positives = 103/229 (44%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
++ C + P + Y + + LLSGS+D T+K+
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 240 (89.5 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 227 (85.0 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 195 (73.7 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 194 (73.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 66/229 (28%), Positives = 103/229 (44%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
++ C + P + Y + + LLSGS+D T+K+
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 240 (89.5 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 227 (85.0 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 195 (73.7 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 194 (73.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 66/229 (28%), Positives = 103/229 (44%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
++ C + P + Y + + LLSGS+D T+K+
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 240 (89.5 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 227 (85.0 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 195 (73.7 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 194 (73.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 66/229 (28%), Positives = 103/229 (44%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
++ C + P + Y + + LLSGS+D T+K+
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>RGD|1306281 [details] [associations]
symbol:Aamp "angio-associated, migratory cell protein"
species:10116 "Rattus norvegicus" [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0014909 "smooth muscle cell migration"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306281 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 CTD:14
GeneTree:ENSGT00690000102167 OMA:VWSFEVG EMBL:CH474004
RefSeq:NP_001100390.1 UniGene:Rn.13592 ProteinModelPortal:G3V7V2
PRIDE:G3V7V2 Ensembl:ENSRNOT00000019497 GeneID:301512
KEGG:rno:301512 NextBio:648863 Uniprot:G3V7V2
Length = 435
Score = 240 (89.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 89/349 (25%), Positives = 151/349 (43%)
Query: 85 VYQPQ--AVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQT 141
V +PQ V + + T A H+ +V V+ P LA +G D +W L+
Sbjct: 67 VLEPQEGVVGSMEGPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGE 126
Query: 142 PMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
+F+C GHK+ V C +S D + +G +G L+ W +T + + +G +W+ W
Sbjct: 127 LLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVETKEEVWSFEAGDLEWM---EW 183
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
P AP ++ + DG+ +W V C G TC + DG G +D
Sbjct: 184 HP---RAPV--LLAGTADGNTWMWKVPNGDCKT-FQGPNCPATCGRVLPDGKRAVVGYED 237
Query: 261 CTIKVWETTQGKLIRELKG-HGHW--VNSLALSTEYAL-RTGAFDHTGKQYSS------- 309
TI++W+ QG I LKG GH + +A + + +L TG+ D K S+
Sbjct: 238 GTIRIWDLKQGNPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAKLVSATTGKVVG 297
Query: 310 ---PEEM-KKAALERYNKIKGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRM 356
PE + + +L + + N+ E L G D T+ +++ +S Q
Sbjct: 298 VFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIYD--LSTQTLRHQ 355
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
HQ + + + V + S D ++LW+ TG+ + +RGH +
Sbjct: 356 CQHQSGIVQLLWEAGTAVVYTCSLDGVVRLWDARTGRLLTDYRGHTAEI 404
Score = 172 (65.6 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 56/204 (27%), Positives = 93/204 (45%)
Query: 118 PDGRQLASGSGDTTVRLWDLNTQTPM--FKCT-GHKNWVLCIAWSADGKHLVSGSKAGEL 174
PDG++ G D T+R+WDL P+ K T GH+ + C+A + DG +++GS +
Sbjct: 226 PDGKRAVVGYEDGTIRIWDLKQGNPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQA 285
Query: 175 QCWDPQTGKPSG--NPLSGHKKWITGISWEPVHLNAPCRRFVSASK-------DGDARIW 225
+ TGK G P + + G E + F S DG I+
Sbjct: 286 KLVSATTGKVVGVFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIY 345
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
D+S + + H + + W G V+YT S D +++W+ G+L+ + +GH +
Sbjct: 346 DLSTQT-LRHQCQHQSGIVQLLWEAGTAVVYTCSLDGVVRLWDARTGRLLTDYRGHTAEI 404
Query: 285 NSLALSTEYALR-TGAFDHTGKQY 307
ALS + +L T + DH K +
Sbjct: 405 LDFALSKDASLVVTTSGDHKAKVF 428
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 239 (89.2 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 227 (85.0 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 194 (73.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 194 (73.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 66/229 (28%), Positives = 103/229 (44%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
++ C + P + Y + + LLSGS+D T+K+
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVEDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 238 (88.8 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDISTGMCLMTLVGHDNWVRGV 344
Score = 226 (84.6 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 65/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSTISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WD+S C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 197 (74.4 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 59/204 (28%), Positives = 93/204 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTEYALRTGAFDHTGKQ 306
V ++ + E + T + + TG +
Sbjct: 278 VVECISWAPESSYSTIS-EATGSE 300
Score = 193 (73.0 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 179 (68.1 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 67/229 (29%), Positives = 103/229 (44%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ T
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
++ C + P + Y + + LLSGS+D T+K+
Sbjct: 277 ---HVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKM 322
Score = 165 (63.1 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 59/228 (25%), Positives = 107/228 (46%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQW--VASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + ++ A+ ++ K +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSTISEATGSETKK--SGKPGPFL 311
Score = 152 (58.6 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HTG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 223 (83.6 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 59/193 (30%), Positives = 94/193 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT--QTPMFKCTGHKNWVLCIAWSA 160
T+ GH V+SV S +G AS S D +RLWDL T Q W +A+S
Sbjct: 59 TLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWT--VAFSP 116
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
D K++ +GS G++ + ++GK + L K+I I++ P + S + DG
Sbjct: 117 DSKYIATGSHLGKVNIFGVESGKKE-HSLDTRGKFILSIAYSP-----DGKYLASGAIDG 170
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
I+D++ K + L GH + + + + D ++ T S D IK+++ L L G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 280 HGHWVNSLALSTE 292
HG WV S+A S +
Sbjct: 231 HGSWVLSVAFSPD 243
Score = 213 (80.0 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 50/158 (31%), Positives = 82/158 (51%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ +D Q +G LSGH W+ +++ P + FVS+S D ++WD S R
Sbjct: 211 DGYIKIYDVQHANLAGT-LSGHGSWVLSVAFSPDDTH-----FVSSSSDKSIKVWDTSSR 264
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
CV H V VK+ G I + D I +++
Sbjct: 265 SCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 160 (61.4 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 72/288 (25%), Positives = 125/288 (43%)
Query: 137 LNTQ-TPMFKCT-GHKNWVLCIAWSA---DGKH-LVSGSKAGELQCWDPQTGKPSGN-PL 189
++TQ + +FK H++ + AW DG +V+GS ++ W K L
Sbjct: 1 MSTQYSILFKQEHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTL 60
Query: 190 SGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG 249
GH+ + ++ + N S+S D R+WD+ K + + + V +
Sbjct: 61 EGHQLGVVSVN---ISQNGAIA--ASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFS 115
Query: 250 GDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQY 307
D I TGS + ++ GK L G ++ S+A S + L +GA D +
Sbjct: 116 PDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 308 SSPEEMKKAALERYNK-IKGN--APER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
LE + I+ +P+ LV+ SDD + +++ + T ++GH
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-LSGHGSW 234
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
V V FSPD S+S DKSIK+W+ ++ V F H V+ +++
Sbjct: 235 VLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKY 282
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 35/124 (28%), Positives = 59/124 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FSPD + L + S D ++++D+ +GH +WVL +A+S D
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD + + N H+ + + + P + VSA D
Sbjct: 245 THFVSSSSDKSIKVWDTSS-RSCVNTFFDHQDQVWSVKYNPTG-----SKIVSAGDDRAI 298
Query: 223 RIWD 226
I+D
Sbjct: 299 HIYD 302
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 24/88 (27%), Positives = 48/88 (54%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ ++ N + T++GH VLSVAFSPD S S D ++++WD ++++ + H+
Sbjct: 216 IYDVQHAN-LAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQ 274
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWD 178
+ V + ++ G +VS + +D
Sbjct: 275 DQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 243 (90.6 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 66/205 (32%), Positives = 101/205 (49%)
Query: 104 IAGHTEAVLSVAFSPD-GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H+ V S+ GR LA+G D V +W + Q TGH + + SA
Sbjct: 16 IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSV-AQLRHDLLTGHTTPIESLQISAKE 74
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S D D
Sbjct: 75 ELIVAGSQSGSIRVWDLEAAKIL-RTLLGHKANICSLDFHPYG------SFVASGSLDTD 127
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WDV + C+ HT AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 128 IKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGH 187
Query: 281 GHWVNSLAL--STEYALRTGAFDHT 303
VN + S EY L +G+ T
Sbjct: 188 YGPVNVVEFHPSIEYLLASGSSSMT 212
Score = 210 (79.0 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 61/214 (28%), Positives = 98/214 (45%)
Query: 61 HELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSP 118
H+LL + +E ++S ++ L + R+ + T+ GH + S+ F P
Sbjct: 55 HDLLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHP 114
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
G +ASGS DT ++LWD+ + +FK H V C+ +S DGK L S + ++ WD
Sbjct: 115 YGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWD 174
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPV--HLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
GK +GH + + + P +L A S S R WD+ V C+
Sbjct: 175 LTAGKVMFE-FTGHYGPVNVVEFHPSIEYLLA------SGSSSMTIRFWDLEKFHVVSCI 227
Query: 237 SGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
V C+ + DG +Y G QD +++V WE
Sbjct: 228 EEEATPVRCILFNPDGCCLYGGFQD-SLRVYGWE 260
Score = 177 (67.4 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 62/197 (31%), Positives = 88/197 (44%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRE-LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPE 311
++ TG DC + VW Q L + L GH + SL +S + L A +G
Sbjct: 35 LLATGGDDCRVNVWSVAQ--LRHDLLTGHTTPIESLQISAKEELIV-AGSQSGSIRVWDL 91
Query: 312 EMKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV 363
E K L K N P + SGS D + LW+ K + H Q V
Sbjct: 92 EAAKI-LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR-RKGCIFKYKSHTQAV 149
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFY 423
+ FSPDG+W+ASA+ D ++KLW+ T GK + F GH GPV + F +PS Y
Sbjct: 150 RCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEF-------HPSIEY 202
Query: 424 CVVDMSCCMSLYSWSAD 440
+ S M++ W +
Sbjct: 203 LLASGSSSMTIRFWDLE 219
Score = 146 (56.5 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 45/224 (20%), Positives = 95/224 (42%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GHT + S+ S + +GS ++R+WDL + GHK + + + G
Sbjct: 58 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS 117
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+ SGS +++ WD + K H + + + + P + SA+ D +
Sbjct: 118 FVASGSLDTDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSP-----DGKWLASAADDHTVK 171
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
+WD++ K + +GH V V++ + ++ +GS TI+ W+ + ++ ++
Sbjct: 172 LWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEA 231
Query: 282 HWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKI 324
V + + + G F + + Y PE + + K+
Sbjct: 232 TPVRCILFNPDGCCLYGGFQDSLRVYGWEPERCFDVVVVNWGKV 275
Score = 144 (55.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 58/220 (26%), Positives = 96/220 (43%)
Query: 211 RRFVSASKDGDARIWDVS-LRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWET 268
R + D +W V+ LR + L+GHT + ++ + +I GSQ +I+VW+
Sbjct: 34 RLLATGGDDCRVNVWSVAQLRHDL--LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL 91
Query: 269 TQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYN----- 322
K++R L GH + SL + + +G+ D K + + +K + +Y
Sbjct: 92 EAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW---DVRRKGCIFKYKSHTQA 148
Query: 323 -KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV-ASA 378
+ +P+ L S +DD T+ LW+ K TGH VN V F P +++ AS
Sbjct: 149 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKV-MFEFTGHYGPVNVVEFHPSIEYLLASG 207
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRY 418
S +I+ W+ V+ PV I F C Y
Sbjct: 208 SSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLY 247
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 241 (89.9 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 65/210 (30%), Positives = 100/210 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T GH + + VAF P G+ L + S D T RLWD+NT + GH V IA+ DG
Sbjct: 334 TFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDG 393
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
S + WD +TG+ S GH K + +++ P N S +D
Sbjct: 394 ALAASCGLDSLARVWDLRTGR-SILVFQGHIKPVFSVNFSP---NG--YHLASGGEDNQC 447
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGG-DGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
RIWD+ +RK + + H V+ VK+ +G + T S D + +W L++ L GH
Sbjct: 448 RIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGH 507
Query: 281 GHWVNSLALSTEYA-LRTGAFDHTGKQYSS 309
V SL ++ + + + T + D T K ++S
Sbjct: 508 ESKVASLDITADSSCIATVSHDRTIKLWTS 537
Score = 179 (68.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 63/257 (24%), Positives = 110/257 (42%)
Query: 97 VNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN-TQTPMFKCTGHKNWVLC 155
V A + H E V FSP LA+ S D T +LW + T F+ GH + +
Sbjct: 287 VTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFE--GHLDRLAR 344
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+A+ GK+L + S + WD TG GH + + GI+++ A S
Sbjct: 345 VAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQ-EGHSRSVYGIAFQQDGALA-----AS 398
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLI 274
D AR+WD+ + ++ GH V V + +G + +G +D ++W+ K +
Sbjct: 399 CGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSL 458
Query: 275 RELKGHGHWVNSLALSTE--YALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKG---NA 328
+ H + V+ + + Y L T ++D +S + + K+ +K+ A
Sbjct: 459 YIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITA 518
Query: 329 PERLVSG-SDDFTMFLW 344
++ S D T+ LW
Sbjct: 519 DSSCIATVSHDRTIKLW 535
Score = 156 (60.0 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 66/296 (22%), Positives = 120/296 (40%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSADGKH 164
G + +FS DG+ LA+ S +LW++ T HK + +S
Sbjct: 253 GDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDC 312
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L + S + W +T GH + +++ P + + S D R+
Sbjct: 313 LATASADRTAKLW--KTDGTLLQTFEGHLDRLARVAFHPSG-----KYLGTTSYDKTWRL 365
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHW 283
WD++ ++ GH+ +V + + DG + D +VW+ G+ I +GH
Sbjct: 366 WDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKP 425
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKK------AALERYNKIKGNAPER--LVS 334
V S+ S Y L +G D+ + + M+K A +++K E L +
Sbjct: 426 VFSVNFSPNGYHLASGGEDNQCRIWDL--RMRKSLYIIPAHANLVSQVKYEPQEGYFLAT 483
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
S D + +W K+ + GH+ V + + D +A+ S D++IKLW +
Sbjct: 484 ASYDMKVNIWSGRDFSLVKS-LAGHESKVASLDITADSSCIATVSHDRTIKLWTSS 538
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 56/218 (25%), Positives = 93/218 (42%)
Query: 204 VHLNAPCRRFVSASKDGDARI-WDVSLRK--CVICLS-GHTLAVTCVKWGGDG-VIYTGS 258
V + RR +D DA W + K + C + G +T + DG ++ T S
Sbjct: 215 VRIQRAKRRRDDPDEDMDAETKWALKHAKHMALDCSNFGDDRPLTGCSFSRDGKILATCS 274
Query: 259 QDCTIKVWETTQ-GKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
K+WE Q I LK H + S + L T + D T K + + + +
Sbjct: 275 LSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQT 334
Query: 317 A---LERYNKIKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
L+R ++ + + L + S D T LW+ + + GH + V + F DG
Sbjct: 335 FEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQ-EGHSRSVYGIAFQQDG 393
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
AS D ++W+ TG+ + VF+GH+ PV+ + F
Sbjct: 394 ALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNF 431
Score = 138 (53.6 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 64/257 (24%), Positives = 114/257 (44%)
Query: 215 SASKDGDARIWDV-SLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQGK 272
+ S G ++W++ + + L H T V + D + T S D T K+W+T G
Sbjct: 272 TCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKT-DGT 330
Query: 273 LIRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK-IKGNAP 329
L++ +GH + +A S +Y L T ++D T + + + E +++ + G A
Sbjct: 331 LLQTFEGHLDRLARVAFHPSGKY-LGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAF 389
Query: 330 ER---LVS--GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
++ L + G D +W+ + GH + V V FSP+G +AS D
Sbjct: 390 QQDGALAASCGLDSLAR-VWDLRTGRSILV-FQGHIKPVFSVNFSPNGYHLASGGEDNQC 447
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSA-DSRL 443
++W+ K + + H V Q+++E P Y + S M + WS D L
Sbjct: 448 RIWDLRMRKSLYIIPAHANLVSQVKYE-------PQEGYFLATASYDMKVNIWSGRDFSL 500
Query: 444 L--LSG--SKDSTLKVT 456
+ L+G SK ++L +T
Sbjct: 501 VKSLAGHESKVASLDIT 517
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 246 (91.7 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 82/291 (28%), Positives = 130/291 (44%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWD---LNTQTPMFKCTGHKNWVLCIAWSADGKHLVS 167
+ ++A++P+GR+L +G+ LW+ N +T + H V + WS + +V+
Sbjct: 149 IFTLAWTPEGRRLVTGASSGEFTLWNGLTFNFETIL---QAHDISVRTMVWSHNDSWMVT 205
Query: 168 GSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDV 227
G G ++ W Q+ + HK+ I GIS+ P +FVS S DG RIWD
Sbjct: 206 GDHGGYVKYW--QSNMNNVKMYQAHKEAIRGISFSPTD-----SKFVSGSDDGTLRIWDF 258
Query: 228 SLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCT--IKVWETTQGKLIRELKGHGHWV 284
+ L GH V CV W G+I +GS+D IK+W+ G + L H V
Sbjct: 259 MRCQEERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTV 318
Query: 285 NSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----P--ERLV-SGS 336
L + L T + DH K + ++ + R +K + ++ P E L SG
Sbjct: 319 MDLKWNDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGG 378
Query: 337 DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
D ++ W K+ T H +V + + P G + S S D +IK W
Sbjct: 379 SDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFW 429
Score = 207 (77.9 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 65/225 (28%), Positives = 106/225 (47%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
H EA+ ++FSP + SGS D T+R+WD GH V C+ W +V
Sbjct: 228 HKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQKGMIV 287
Query: 167 SGSKAGE--LQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
SGSK + ++ WDP++G L HK + + W N V+AS+D ++
Sbjct: 288 SGSKDNQQPIKIWDPKSGIALAT-LHAHKSTVMDLKW-----NDNGNWLVTASRDHLLKL 341
Query: 225 WDV-SLRKCVICLSGHTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGKLIRELK-GH 280
+D+ +LR+ V GH + V W +G+ +G D +I W K I ++ H
Sbjct: 342 FDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVETAH 401
Query: 281 GHWVNSLALST-EYALRTGAFDHTGKQYSS--PEEMKKAALERYN 322
V +LA + L +G+ DHT K ++ P ++ + ++YN
Sbjct: 402 DSIVWTLAWHPLGHILCSGSNDHTIKFWTRNRPGDLMR---DKYN 443
Score = 205 (77.2 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 55/191 (28%), Positives = 88/191 (46%)
Query: 93 RIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSGDTT--VRLWDLNTQTPMFKCTG 148
RI RC + GH V V + P + SGS D +++WD + +
Sbjct: 254 RIWDFMRCQEERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHA 313
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA 208
HK+ V+ + W+ +G LV+ S+ L+ +D + + GHKK + +SW P+H
Sbjct: 314 HKSTVMDLKWNDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGL 373
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICL-SGHTLAVTCVKWGGDG-VIYTGSQDCTIKVW 266
C S DG W+V K + C+ + H V + W G ++ +GS D TIK W
Sbjct: 374 FC----SGGSDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFW 429
Query: 267 ETTQ-GKLIRE 276
+ G L+R+
Sbjct: 430 TRNRPGDLMRD 440
Score = 135 (52.6 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 46/201 (22%), Positives = 90/201 (44%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETT 269
RR V+ + G+ +W+ L H ++V + W D + TG +K W++
Sbjct: 159 RRLVTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGDHGGYVKYWQSN 218
Query: 270 QGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYN---KIK 325
++ + H + ++ S T+ +G+ D T + + ++ L + K
Sbjct: 219 MNN-VKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCV 277
Query: 326 GNAPER--LVSGSDDFT--MFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
P++ +VSGS D + +W+P T + H+ V + ++ +G W+ +AS D
Sbjct: 278 HWHPQKGMIVSGSKDNQQPIKIWDPKSGIALAT-LHAHKSTVMDLKWNDNGNWLVTASRD 336
Query: 382 KSIKLWN-GTTGKFVAVFRGH 401
+KL++ + V VFRGH
Sbjct: 337 HLLKLFDIRNLREEVQVFRGH 357
Score = 42 (19.8 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 436 SWSADSRLLLSGSKDSTLK 454
+W +L SGS D T+K
Sbjct: 409 AWHPLGHILCSGSNDHTIK 427
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 237 (88.5 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 60/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS ++ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSAARDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 224 (83.9 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 65/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S + D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 194 (73.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 192 (72.6 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 55/190 (28%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSA++D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSAARDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 170 (64.9 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 65/229 (28%), Positives = 103/229 (44%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS + D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSAARDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
++ C + P + Y + + LLSGS+D T+K+
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 59/226 (26%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + A D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 148 (57.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 45/184 (24%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + ++D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SAARDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 216 (81.1 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 57/196 (29%), Positives = 94/196 (47%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
P+ R ++ GH V V S DG+ SGS D T+RLWDLN + H VL
Sbjct: 57 PIGRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLS 116
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+A+SAD + +VSGS+ ++ W+ H W++ + + P + + P VS
Sbjct: 117 VAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRD-PV--IVS 173
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
A D ++W++ + GHT V V DG + +G +D +W+ +GK +
Sbjct: 174 AGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL 233
Query: 275 RELKGHGHWVNSLALS 290
L G+ +N+++ S
Sbjct: 234 YTLPGNDV-INAMSFS 248
Score = 179 (68.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 58/213 (27%), Positives = 105/213 (49%)
Query: 99 RCSATIAGHTEAVLSVAFSP--DGRQLASGSGDTTVRLWDLNTQTPMFK---------CT 147
+ + T+ GHT V +A D + S S D T+ +WD+++ P+ + T
Sbjct: 7 KLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLT 66
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GH ++V + S+DG+ +SGS L+ WD G + +S H K + +++ +
Sbjct: 67 GHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFIS-HTKDVLSVAF-----S 120
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSG--HTLAVTCVKWGG---DGVIYTGSQDCT 262
A R+ VS S+D ++W+ +L +C ++ HT V+ V++ D VI + D
Sbjct: 121 ADNRQIVSGSRDKSIKLWN-TLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKV 179
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYAL 295
+KVW +L GH +VN++ +S + +L
Sbjct: 180 VKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSL 212
Score = 177 (67.4 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 50/176 (28%), Positives = 86/176 (48%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG--HKNWVLCIAWSADGKH 164
HT+ VLSVAFS D RQ+ SGS D +++LW+ Q + T H +WV + +S +
Sbjct: 110 HTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCK-YTITDDCHTDWVSTVRFSPSNRD 168
Query: 165 --LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+VS ++ W+ + N + GH ++ ++ P + C S KDG A
Sbjct: 169 PVIVSAGWDKVVKVWNLGNCRLKTNHI-GHTGYVNTVTVSPD--GSLC---ASGGKDGQA 222
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
+WD++ K + L G+ + + + + + + +IK+W+ K I ELK
Sbjct: 223 MLWDLNEGKHLYTLPGNDV-INAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELK 277
Score = 152 (58.6 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 68/261 (26%), Positives = 115/261 (44%)
Query: 148 GHKNWVLCIA-WSADGKHLV-SGSKAGELQCWD-----PQTGKPSGNP---LSGHKKWIT 197
GH WV IA ++ + K V S S+ + WD P P G P L+GH +++
Sbjct: 14 GHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVS 73
Query: 198 GISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYT 256
+ +++ + +S S D R+WD++ HT V V + D I +
Sbjct: 74 DVV-----ISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVS 128
Query: 257 GSQDCTIKVWET-TQGKLIRELKGHGHWVNSLALST---EYALRTGAFDHTGKQYSSPE- 311
GS+D +IK+W T Q K H WV+++ S + + + +D K ++
Sbjct: 129 GSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNC 188
Query: 312 EMKKAALER--Y-NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY 367
+K + Y N + + L SG D LW+ K T + G+ ++N +
Sbjct: 189 RLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LPGND-VINAMS 246
Query: 368 FSPDGQWVASASFDKSIKLWN 388
FSP+ W+ +A SIK+W+
Sbjct: 247 FSPNRYWLCAA-VGSSIKIWD 266
Score = 137 (53.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 58/229 (25%), Positives = 99/229 (43%)
Query: 189 LSGHKKWITGISW-----EPVHLNAPCRRFVSA-SKDGDARIWDVSLRKCVICLSGHTLA 242
L GH W+T I+ + L++ + + D A + + + + V L+GH
Sbjct: 12 LEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHF 71
Query: 243 VTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAF 300
V+ V DG +GS D T+++W+ QG R+ H V S+A S + + +G+
Sbjct: 72 VSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSR 131
Query: 301 DHTGKQYSSPEEMKKAALER-----YNKIKGNAPER---LVSGSDDFTMFLWEPAVSKQP 352
D + K +++ + K + + ++ + R +VS D + +W +
Sbjct: 132 DKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRL- 190
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
KT GH VN V SPDG AS D LW+ GK + G+
Sbjct: 191 KTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN 239
Score = 134 (52.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 48/166 (28%), Positives = 78/166 (46%)
Query: 251 DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE--YALRTGAFDHTGKQYS 308
D I D V E G+ +R L GH H+V+ + +S++ +AL +G++D T + +
Sbjct: 39 DKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFAL-SGSWDKTLRLWD 97
Query: 309 SPEEMKKAALERYNK----IKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTG--HQQ 361
+ + + K + +A R +VSGS D ++ LW Q K +T H
Sbjct: 98 LNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLA--QCKYTITDDCHTD 155
Query: 362 LVNHVYFSPDGQ--WVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
V+ V FSP + + SA +DK +K+WN + GH G V
Sbjct: 156 WVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYV 201
Score = 112 (44.5 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 327 NAPERLVSGSDDFTMFLWE-PAVSK-------QPKTRMTGHQQLVNHVYFSPDGQWVASA 378
N ++S S D T+ +W+ +V+ +P +TGH V+ V S DGQ+ S
Sbjct: 28 NDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSG 87
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
S+DK+++LW+ G F H V + F
Sbjct: 88 SWDKTLRLWDLNQGVSTRQFISHTKDVLSVAF 119
Score = 54 (24.1 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 9/20 (45%), Positives = 18/20 (90%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
++SAD+R ++SGS+D ++K+
Sbjct: 118 AFSADNRQIVSGSRDKSIKL 137
Score = 52 (23.4 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKV 455
C+SL +WS D + L +G D+ ++V
Sbjct: 293 CISL-AWSQDGQTLFAGYTDNIIRV 316
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 216 (81.1 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 57/196 (29%), Positives = 94/196 (47%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
P+ R ++ GH V V S DG+ SGS D T+RLWDLN + H VL
Sbjct: 57 PIGRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLS 116
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+A+SAD + +VSGS+ ++ W+ H W++ + + P + + P VS
Sbjct: 117 VAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRD-PV--IVS 173
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
A D ++W++ + GHT V V DG + +G +D +W+ +GK +
Sbjct: 174 AGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL 233
Query: 275 RELKGHGHWVNSLALS 290
L G+ +N+++ S
Sbjct: 234 YTLPGNDV-INAMSFS 248
Score = 179 (68.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 58/213 (27%), Positives = 105/213 (49%)
Query: 99 RCSATIAGHTEAVLSVAFSP--DGRQLASGSGDTTVRLWDLNTQTPMFK---------CT 147
+ + T+ GHT V +A D + S S D T+ +WD+++ P+ + T
Sbjct: 7 KLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLT 66
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GH ++V + S+DG+ +SGS L+ WD G + +S H K + +++ +
Sbjct: 67 GHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFIS-HTKDVLSVAF-----S 120
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSG--HTLAVTCVKWGG---DGVIYTGSQDCT 262
A R+ VS S+D ++W+ +L +C ++ HT V+ V++ D VI + D
Sbjct: 121 ADNRQIVSGSRDKSIKLWN-TLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKV 179
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYAL 295
+KVW +L GH +VN++ +S + +L
Sbjct: 180 VKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSL 212
Score = 177 (67.4 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 50/176 (28%), Positives = 86/176 (48%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG--HKNWVLCIAWSADGKH 164
HT+ VLSVAFS D RQ+ SGS D +++LW+ Q + T H +WV + +S +
Sbjct: 110 HTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCK-YTITDDCHTDWVSTVRFSPSNRD 168
Query: 165 --LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+VS ++ W+ + N + GH ++ ++ P + C S KDG A
Sbjct: 169 PVIVSAGWDKVVKVWNLGNCRLKTNHI-GHTGYVNTVTVSPD--GSLC---ASGGKDGQA 222
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
+WD++ K + L G+ + + + + + + +IK+W+ K I ELK
Sbjct: 223 MLWDLNEGKHLYTLPGNDV-INAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELK 277
Score = 152 (58.6 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 68/261 (26%), Positives = 115/261 (44%)
Query: 148 GHKNWVLCIA-WSADGKHLV-SGSKAGELQCWD-----PQTGKPSGNP---LSGHKKWIT 197
GH WV IA ++ + K V S S+ + WD P P G P L+GH +++
Sbjct: 14 GHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVS 73
Query: 198 GISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYT 256
+ +++ + +S S D R+WD++ HT V V + D I +
Sbjct: 74 DVV-----ISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVS 128
Query: 257 GSQDCTIKVWET-TQGKLIRELKGHGHWVNSLALST---EYALRTGAFDHTGKQYSSPE- 311
GS+D +IK+W T Q K H WV+++ S + + + +D K ++
Sbjct: 129 GSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNC 188
Query: 312 EMKKAALER--Y-NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY 367
+K + Y N + + L SG D LW+ K T + G+ ++N +
Sbjct: 189 RLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LPGND-VINAMS 246
Query: 368 FSPDGQWVASASFDKSIKLWN 388
FSP+ W+ +A SIK+W+
Sbjct: 247 FSPNRYWLCAA-VGSSIKIWD 266
Score = 137 (53.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 58/229 (25%), Positives = 99/229 (43%)
Query: 189 LSGHKKWITGISW-----EPVHLNAPCRRFVSA-SKDGDARIWDVSLRKCVICLSGHTLA 242
L GH W+T I+ + L++ + + D A + + + + V L+GH
Sbjct: 12 LEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHF 71
Query: 243 VTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAF 300
V+ V DG +GS D T+++W+ QG R+ H V S+A S + + +G+
Sbjct: 72 VSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSR 131
Query: 301 DHTGKQYSSPEEMKKAALER-----YNKIKGNAPER---LVSGSDDFTMFLWEPAVSKQP 352
D + K +++ + K + + ++ + R +VS D + +W +
Sbjct: 132 DKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRL- 190
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
KT GH VN V SPDG AS D LW+ GK + G+
Sbjct: 191 KTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN 239
Score = 134 (52.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 48/166 (28%), Positives = 78/166 (46%)
Query: 251 DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE--YALRTGAFDHTGKQYS 308
D I D V E G+ +R L GH H+V+ + +S++ +AL +G++D T + +
Sbjct: 39 DKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFAL-SGSWDKTLRLWD 97
Query: 309 SPEEMKKAALERYNK----IKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTG--HQQ 361
+ + + K + +A R +VSGS D ++ LW Q K +T H
Sbjct: 98 LNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLA--QCKYTITDDCHTD 155
Query: 362 LVNHVYFSPDGQ--WVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
V+ V FSP + + SA +DK +K+WN + GH G V
Sbjct: 156 WVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYV 201
Score = 112 (44.5 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 327 NAPERLVSGSDDFTMFLWE-PAVSK-------QPKTRMTGHQQLVNHVYFSPDGQWVASA 378
N ++S S D T+ +W+ +V+ +P +TGH V+ V S DGQ+ S
Sbjct: 28 NDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSG 87
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
S+DK+++LW+ G F H V + F
Sbjct: 88 SWDKTLRLWDLNQGVSTRQFISHTKDVLSVAF 119
Score = 54 (24.1 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 9/20 (45%), Positives = 18/20 (90%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
++SAD+R ++SGS+D ++K+
Sbjct: 118 AFSADNRQIVSGSRDKSIKL 137
Score = 52 (23.4 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKV 455
C+SL +WS D + L +G D+ ++V
Sbjct: 293 CISL-AWSQDGQTLFAGYTDNIIRV 316
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 240 (89.5 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 82/315 (26%), Positives = 141/315 (44%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
+R +N + I G + FSP+ + LA+ +LW + + GH V
Sbjct: 217 LRSLNNFCSQI-GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNV 275
Query: 154 LCIAW------SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
I + S D K +L S + G ++ W + +P + + GH + ++W H
Sbjct: 276 GAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD-IEGHTVRVARVTW---H 331
Query: 206 LNAPCRRFVSAS-KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
P RF+ + D R+WD+ ++ ++ GH++ V + + DG + TG D
Sbjct: 332 ---PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFG 388
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQ---------YSSPEEM 313
+VW+ G+ I L+GH + + S Y + TG+ D+T K Y+ P
Sbjct: 389 RVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 448
Query: 314 KKAALERYNKIKGNAPERLVSGSDDFTMFLW-EPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
++ I GN L++G+ D T +W P S P + GH+ V + S DG
Sbjct: 449 NLVTGVKFEPIHGNF---LLTGAYDNTAKIWTHPGWS--PLKTLAGHEGKVMGLDISSDG 503
Query: 373 QWVASASFDKSIKLW 387
Q +A+ S+D++ KLW
Sbjct: 504 QLIATCSYDRTFKLW 518
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 66/260 (25%), Positives = 110/260 (42%)
Query: 158 WSADGKHLVSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEP---VHLNAPCRRF 213
+S + K L + +G + W P + L GH + I + P V L+
Sbjct: 238 FSPNSKMLATACWSGLCKLWSVPDCNLL--HTLRGHNTNVGAIVFHPKSTVSLDQKDVNL 295
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
S + DG ++W + + V + GHT+ V V W G + T D + ++W+ +
Sbjct: 296 ASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQE 355
Query: 273 LIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERYNK-IKG-N-A 328
I +GH V +A + +L TG D G+ + LE + K I G N +
Sbjct: 356 EILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFS 415
Query: 329 PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP-DGQWVASASFDKSIK 385
P + +GS D T +W+ + T + HQ LV V F P G ++ + ++D + K
Sbjct: 416 PNGYHIATGSGDNTCKVWDLRQRRCVYT-IPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 474
Query: 386 LWNGTTGKFVAVFRGHVGPV 405
+W + GH G V
Sbjct: 475 IWTHPGWSPLKTLAGHEGKV 494
Score = 144 (55.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R RC + GH + + + FSP+G +A+GSGD T ++WDL + ++ H+
Sbjct: 390 VWDLR-TGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 448
Query: 151 NWVLCIAWSA-DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP 209
N V + + G L++G+ + W P L+GH+ + G+ +++
Sbjct: 449 NLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPL-KTLAGHEGKVMGLD-----ISSD 502
Query: 210 CRRFVSASKDGDARIW 225
+ + S D ++W
Sbjct: 503 GQLIATCSYDRTFKLW 518
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 241 (89.9 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 76/278 (27%), Positives = 130/278 (46%)
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKK----WITGISWEPV 204
H + V C+ +S DGK+L +G Q +D TGK + +K +I + + P
Sbjct: 280 HNSVVCCVNFSNDGKYLATGCNRSA-QIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSP- 337
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
+ ++D ++WD+ +K GH L + + + DG I +GS D
Sbjct: 338 ----DGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKA 393
Query: 264 KVWETTQGK----LIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPE----EMK 314
K+W+ +GK L E G + V S+A+S + L G+ D+ + + + E
Sbjct: 394 KIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERY 453
Query: 315 KAALER-YNKIKGNAPERLVSGSDDFTMFLWEPAVSK-QPKTRMT--GHQQLVNHVYFSP 370
+ L+ Y+ + L SGS D ++ LW+ + S+ + + R T GH+ V V FSP
Sbjct: 454 EGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSP 513
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
DG W+ S S D+S++ W+ G + +GH V +
Sbjct: 514 DGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISV 551
Score = 237 (88.5 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 71/252 (28%), Positives = 121/252 (48%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+ SV FSPDG LA+G+ D TV++WD++T+ GH+ + + +S+DG+ +VSGS
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSG 389
Query: 171 AGELQCWDPQTGKPS---GNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDV 227
+ + WD + GK + GN G K +T ++ P R + S D R+WD
Sbjct: 390 DKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSP-----DGRLVAAGSLDNIVRLWDA 444
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETT----QGKLIRELKGHGH 282
+ GH +V V + DG + +GS D ++K+W+ + + + GH
Sbjct: 445 QTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKD 504
Query: 283 WVNSLALSTEYA-LRTGAFDHT--------GKQYSSPEEMKKAALERYNKIKGNAPERLV 333
+V S+A S + + L +G+ D + G + + K + + K N+
Sbjct: 505 FVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFA 564
Query: 334 SGSDDFTMFLWE 345
+GS DF LW+
Sbjct: 565 TGSGDFRSRLWK 576
Score = 224 (83.9 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 81/304 (26%), Positives = 140/304 (46%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT--QTPMFKCTGHKN---WVLCIAWSAD 161
H V V FS DG+ LA+G + + +++D++T + F K+ ++ + +S D
Sbjct: 280 HNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
G +L +G++ ++ WD T K + GH+ I + + ++ R VS S D
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQ-HTFYGHELDIYSLDY-----SSDGRFIVSGSGDKK 392
Query: 222 ARIWDVSLRKCVICLSGHTLA----VTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRE 276
A+IWD+ KC L + VT V DG ++ GS D +++W+ G +
Sbjct: 393 AKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLER 452
Query: 277 LKGHGHWVNSLALSTE-YALRTGAFDHTGKQYS-SPEEMKKAALERYNKIK------GNA 328
+GH V S+A S + +L +G+ D + K + S + +N K +
Sbjct: 453 YEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFS 512
Query: 329 PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP--DGQWV-ASASFDKS 383
P+ L+SGS D ++ W+P + + GH+ V V SP + V A+ S D
Sbjct: 513 PDGSWLISGSKDRSVQFWDPR-NGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFR 571
Query: 384 IKLW 387
+LW
Sbjct: 572 SRLW 575
Score = 218 (81.8 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 60/197 (30%), Positives = 94/197 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC----TGHKNWVLCIAW 158
T GH + S+ +S DGR + SGSGD ++WD+ F G KN V +A
Sbjct: 364 TFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAM 423
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
S DG+ + +GS ++ WD QTG GH + +++ P + S S
Sbjct: 424 SPDGRLVAAGSLDNIVRLWDAQTGYFLER-YEGHLDSVYSVAFSP-----DGKSLASGSL 477
Query: 219 DGDARIWDVS----LRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKL 273
D ++WD+S +C +GH V V + DG + +GS+D +++ W+ G
Sbjct: 478 DKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTT 537
Query: 274 IRELKGHGHWVNSLALS 290
L+GH + V S+ALS
Sbjct: 538 HMMLQGHKNSVISVALS 554
Score = 217 (81.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 60/180 (33%), Positives = 85/180 (47%)
Query: 99 RCSATIA----GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
+C+ T+ G V SVA SPDGR +A+GS D VRLWD T + + GH + V
Sbjct: 402 KCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVY 461
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGN---PLSGHKKWITGISWEPVHLNAPCR 211
+A+S DGK L SGS L+ WD + +GHK ++ +++ P
Sbjct: 462 SVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSP-----DGS 516
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCV----KWGGDGVIYTGSQDCTIKVWE 267
+S SKD + WD + L GH +V V K GV TGS D ++W+
Sbjct: 517 WLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWK 576
Score = 160 (61.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 36/82 (43%), Positives = 47/82 (57%)
Query: 95 RPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
R +RC AT GH + VLSVAFSPDG L SGS D +V+ WD T GHKN V+
Sbjct: 490 RSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVI 549
Query: 155 CIAWSA-DGKHLVSGSKAGELQ 175
+A S + H V + +G+ +
Sbjct: 550 SVALSPKNNSHGVFATGSGDFR 571
Score = 153 (58.9 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 50/186 (26%), Positives = 84/186 (45%)
Query: 239 HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR----ELKGHGH-WVNSLALSTE- 292
H V CV + DG + + ++++ GK + E + G ++ S+ S +
Sbjct: 280 HNSVVCCVNFSNDGKYLATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDG 339
Query: 293 YALRTGAFDHTGKQYS-SPEEMKKA----ALERYNKIKGNAPERLVSGSDDFTMFLWEPA 347
L TGA D T K + ++++ L+ Y+ + +VSGS D +W+
Sbjct: 340 NYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIE 399
Query: 348 VSKQPKT---RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGP 404
K T G + V V SPDG+ VA+ S D ++LW+ TG F+ + GH+
Sbjct: 400 KGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDS 459
Query: 405 VYQIRF 410
VY + F
Sbjct: 460 VYSVAF 465
Score = 47 (21.6 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 433 SLYS--WSADSRLLLSGSKDSTLKV 455
S+YS +S D + L SGS D +LK+
Sbjct: 459 SVYSVAFSPDGKSLASGSLDKSLKL 483
Score = 41 (19.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 436 SWSADSRLLLSGSKDSTLK 454
++S D L+SGSKD +++
Sbjct: 510 AFSPDGSWLISGSKDRSVQ 528
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 210 (79.0 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 57/197 (28%), Positives = 94/197 (47%)
Query: 97 VNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
+ ++ GH++A+ V+ S DG SGS D +VRLWDL+ + GH + V +
Sbjct: 61 IGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSV 120
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
++S D + +VS S+ ++ W+ H WIT + + P A VS
Sbjct: 121 SFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAI---IVSC 177
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKL 273
D ++W+ L+ C + L GHT + V DG + +G +D K+W+ +GK
Sbjct: 178 GWDKLVKVWN--LKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKH 235
Query: 274 IRELKGHGHWVNSLALS 290
+ L+ G +NSL S
Sbjct: 236 LYSLET-GSTINSLCFS 251
Score = 202 (76.2 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 76/283 (26%), Positives = 128/283 (45%)
Query: 148 GHKNWVLCIAWSADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW--EP 203
GH +WV ++ D K +VS S+ +L W+ T SG + KK +TG S
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGE-IGTAKKSLTGHSQAIND 77
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
V +++ +S S D R+WD+SL + + GHT V V + D I + S+D T
Sbjct: 78 VSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKT 137
Query: 263 IKVWET-TQGKLIRELKGHGHWVNSLALS---TEYALRTGAFDHTGKQYSSPE-EMKKAA 317
IK+W T Q K + H W+ + S + + + +D K ++ ++ K
Sbjct: 138 IKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKN- 196
Query: 318 LERYNKIKGN---APERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
LE + + +P+ + SG D LW+ K + TG +N + FSP
Sbjct: 197 LEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG--STINSLCFSPCD 254
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYC 415
W+ +A+ D+ I++WN K + + PV Q + + +C
Sbjct: 255 YWLCAAT-DRFIRIWN-LESKLII---SEIYPVKQSKIGVPWC 292
Score = 189 (71.6 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 61/229 (26%), Positives = 110/229 (48%)
Query: 106 GHTEAVLSVAFSPDGR--QLASGSGDTTVRLWDLNTQ-------TPMFKCTGHKNWVLCI 156
GH++ V SV+ D + + S S D + +W++NT T TGH + +
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ S+DG +SGS ++ WD G+ + + GH + +S+ P + R+ VSA
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFI-GHTSDVFSVSFSPDN-----RQIVSA 132
Query: 217 SKDGDARIWDVSLRKCVICLSG--HTLAVTCVKWG---GDGVIYTGSQDCTIKVWETTQG 271
S+D ++W+ +L +C ++ HT +TCV++ +I + D +KVW
Sbjct: 133 SRDKTIKLWN-TLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNC 191
Query: 272 KLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALE 319
L + L+GH +N++ +S + +L +G D K + E +LE
Sbjct: 192 DLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLE 240
Score = 135 (52.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 50/181 (27%), Positives = 79/181 (43%)
Query: 99 RCSATIAG--HTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
+C TI HT+ + V FSP Q + S D V++W+L GH +
Sbjct: 146 QCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLN 205
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ S DG SG K G + WD + GK + +G I + + +PC ++
Sbjct: 206 TVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGST--INSLCF------SPCDYWL 257
Query: 215 SASKDGDARIWDVSLRKCVIC----LSGHTLAV---TCVKWGGDG-VIYTGSQDCTIKVW 266
A+ D RIW++ K +I + + V T + W +G ++Y GS D I V+
Sbjct: 258 CAATDRFIRIWNLE-SKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVY 316
Query: 267 E 267
E
Sbjct: 317 E 317
Score = 59 (25.8 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 405 VYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
++ + +LI YP + + C SL +WSA+ +LL GS D + V
Sbjct: 267 IWNLESKLIISEIYPVK-QSKIGVPWCTSL-TWSANGQLLYCGSTDGNIYV 315
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 210 (79.0 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 57/197 (28%), Positives = 94/197 (47%)
Query: 97 VNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
+ ++ GH++A+ V+ S DG SGS D +VRLWDL+ + GH + V +
Sbjct: 61 IGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSV 120
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
++S D + +VS S+ ++ W+ H WIT + + P A VS
Sbjct: 121 SFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAI---IVSC 177
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKL 273
D ++W+ L+ C + L GHT + V DG + +G +D K+W+ +GK
Sbjct: 178 GWDKLVKVWN--LKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKH 235
Query: 274 IRELKGHGHWVNSLALS 290
+ L+ G +NSL S
Sbjct: 236 LYSLET-GSTINSLCFS 251
Score = 202 (76.2 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 76/283 (26%), Positives = 128/283 (45%)
Query: 148 GHKNWVLCIAWSADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW--EP 203
GH +WV ++ D K +VS S+ +L W+ T SG + KK +TG S
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGE-IGTAKKSLTGHSQAIND 77
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
V +++ +S S D R+WD+SL + + GHT V V + D I + S+D T
Sbjct: 78 VSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKT 137
Query: 263 IKVWET-TQGKLIRELKGHGHWVNSLALS---TEYALRTGAFDHTGKQYSSPE-EMKKAA 317
IK+W T Q K + H W+ + S + + + +D K ++ ++ K
Sbjct: 138 IKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKN- 196
Query: 318 LERYNKIKGN---APERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
LE + + +P+ + SG D LW+ K + TG +N + FSP
Sbjct: 197 LEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG--STINSLCFSPCD 254
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYC 415
W+ +A+ D+ I++WN K + + PV Q + + +C
Sbjct: 255 YWLCAAT-DRFIRIWN-LESKLII---SEIYPVKQSKIGVPWC 292
Score = 189 (71.6 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 61/229 (26%), Positives = 110/229 (48%)
Query: 106 GHTEAVLSVAFSPDGR--QLASGSGDTTVRLWDLNTQ-------TPMFKCTGHKNWVLCI 156
GH++ V SV+ D + + S S D + +W++NT T TGH + +
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ S+DG +SGS ++ WD G+ + + GH + +S+ P + R+ VSA
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFI-GHTSDVFSVSFSPDN-----RQIVSA 132
Query: 217 SKDGDARIWDVSLRKCVICLSG--HTLAVTCVKWG---GDGVIYTGSQDCTIKVWETTQG 271
S+D ++W+ +L +C ++ HT +TCV++ +I + D +KVW
Sbjct: 133 SRDKTIKLWN-TLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNC 191
Query: 272 KLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALE 319
L + L+GH +N++ +S + +L +G D K + E +LE
Sbjct: 192 DLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLE 240
Score = 135 (52.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 50/181 (27%), Positives = 79/181 (43%)
Query: 99 RCSATIAG--HTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
+C TI HT+ + V FSP Q + S D V++W+L GH +
Sbjct: 146 QCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLN 205
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ S DG SG K G + WD + GK + +G I + + +PC ++
Sbjct: 206 TVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGST--INSLCF------SPCDYWL 257
Query: 215 SASKDGDARIWDVSLRKCVIC----LSGHTLAV---TCVKWGGDG-VIYTGSQDCTIKVW 266
A+ D RIW++ K +I + + V T + W +G ++Y GS D I V+
Sbjct: 258 CAATDRFIRIWNLE-SKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVY 316
Query: 267 E 267
E
Sbjct: 317 E 317
Score = 59 (25.8 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 405 VYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
++ + +LI YP + + C SL +WSA+ +LL GS D + V
Sbjct: 267 IWNLESKLIISEIYPVK-QSKIGVPWCTSL-TWSANGQLLYCGSTDGNIYV 315
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 233 (87.1 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 58/205 (28%), Positives = 98/205 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ + S D TV++W + Q +F + H NWV C +S
Sbjct: 58 STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSP 117
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD ++ + + H ++T + + P + C +A D
Sbjct: 118 DGRLIVSASDDKTVKLWD-KSSRECVHSYCEHGGFVTYVDFHP---SGTC--IAAAGMDN 171
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WDV + + H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 172 TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 231
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H ++A S RTG + +G
Sbjct: 232 HQGPATTVAFS-----RTGEYFASG 251
Score = 232 (86.7 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 70/218 (32%), Positives = 101/218 (46%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ ++P +R + GH +AV V FSP G LASGS D TVR+W N + H
Sbjct: 7 VWHMKPQSR-AYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHT 65
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
V + + +DG+ V+ S ++ W K + LS H W+ + P
Sbjct: 66 ATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFS-LSQHINWVRCAKFSP-----DG 119
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETT 269
R VSAS D ++WD S R+CV H VT V + G I D T+KVW+
Sbjct: 120 RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 179
Query: 270 QGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGK 305
+L++ + H VN L+ S Y + T + D T K
Sbjct: 180 THRLLQHYQLHSAAVNGLSFHPSGNYLI-TASSDSTLK 216
Score = 228 (85.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 71/284 (25%), Positives = 123/284 (43%)
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP 188
D+ + +W + Q+ ++ TGHK+ V C+ +S G L SGS+ ++ W P K
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNV-KGESTV 60
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
H + VH + + FV+AS D ++W +K + LS H V C K+
Sbjct: 61 FRAHTATVRS-----VHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKF 115
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQ 306
DG +I + S D T+K+W+ + + + HG +V + + D+T K
Sbjct: 116 SPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKV 175
Query: 307 YSSPEEMKKAALERYNK-IKGNA--PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + ++ + G + P L++ S D T+ + + + T + GHQ
Sbjct: 176 WDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYT-LHGHQG 234
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
V FS G++ AS D+ + +W F V G V V
Sbjct: 235 PATTVAFSRTGEYFASGGSDEQVMVWKSN---FDIVDHGEVTKV 275
Score = 185 (70.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 63/230 (27%), Positives = 100/230 (43%)
Query: 190 SGHKKWITGISWEPV-HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+GHK +T +++ P HL A S S+D RIW +++ HT V V +
Sbjct: 20 TGHKDAVTCVNFSPSGHLLA------SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHF 73
Query: 249 GGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDH-TGKQ 306
DG + T S D T+KVW T + K + L H +WV S + L A D T K
Sbjct: 74 CSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKL 133
Query: 307 YS-SPEEMKKAALER-----YNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQ 360
+ S E + E Y + +G D+ T+ +W+ + + H
Sbjct: 134 WDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN-TVKVWDVRTHRLLQHYQL-HS 191
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
VN + F P G ++ +AS D ++K+ + G+ + GH GP + F
Sbjct: 192 AAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF 241
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 236 (88.1 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 55/175 (31%), Positives = 89/175 (50%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
HT V SV FS DG+ LA+ S D ++++W + Q ++ H +WV C +S DG+ +V
Sbjct: 59 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 118
Query: 167 SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
S S+ ++ WD T K N S + + + P + C SA D ++WD
Sbjct: 119 SCSEDKTIKIWDT-TNKQCVNNFSDSVGFANFVDFNP---SGTC--IASAGSDQTVKVWD 172
Query: 227 VSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGH 280
V + K + H+ V C+ + G + T S D T+K+ + +G+LI L+GH
Sbjct: 173 VRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGH 227
Score = 209 (78.6 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 62/203 (30%), Positives = 93/203 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH + V SV FSP G LAS S D TVRLW + + + H V + +SADG+ L
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFL 75
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+ S+ ++ W + + L H W+ + P R VS S+D +IW
Sbjct: 76 ATASEDKSIKVWSMYRQRFLYS-LYRHTHWVRCAKFSP-----DGRLIVSCSEDKTIKIW 129
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
D + ++CV S V + G I + D T+KVW+ KL++ + H V
Sbjct: 130 DTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGV 189
Query: 285 NSLAL--STEYALRTGAFDHTGK 305
N ++ S Y + T + D T K
Sbjct: 190 NCISFHPSGNYLI-TASSDGTLK 211
Score = 207 (77.9 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 64/230 (27%), Positives = 101/230 (43%)
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GHK +T + + P H N SAS+D R+W R HT V V +
Sbjct: 16 GHKDVVTSVQFSP-HGNL----LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSA 70
Query: 251 DG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYS 308
DG + T S+D +IKVW + + + L H HWV S + L D T K +
Sbjct: 71 DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 130
Query: 309 SPEEMKKAALERYNKIKGNA------PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQ 360
+ K + ++ G A P + S D T+ +W+ V+K + H
Sbjct: 131 TTN---KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV-HS 186
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
VN + F P G ++ +AS D ++K+ + G+ + +GH GPV+ + F
Sbjct: 187 GGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF 236
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 65/265 (24%), Positives = 113/265 (42%)
Query: 134 LWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDP-QTGKPSGNPLSGH 192
LW+ ++ GHK+ V + +S G L S S+ ++ W P + GK S H
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFS--EFKAH 59
Query: 193 KKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG 252
+ + + +A + +AS+D ++W + ++ + L HT V C K+ DG
Sbjct: 60 TAPVRSVDF-----SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG 114
Query: 253 -VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSP 310
+I + S+D TIK+W+TT + + + N + + + + D T K +
Sbjct: 115 RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV- 173
Query: 311 EEMKKAALERYNKIKGNA------PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
+ K L+ Y G P L++ S D T+ + + + T + GH
Sbjct: 174 -RVNKL-LQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYT-LQGHTGP 230
Query: 363 VNHVYFSPDGQWVASASFDKSIKLW 387
V V FS G+ AS D + LW
Sbjct: 231 VFTVSFSKGGELFASGGADTQVLLW 255
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 38/117 (32%), Positives = 57/117 (48%)
Query: 355 RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW-NGTTGKFVAVFRGHVGPVYQIRFELI 413
R GH+ +V V FSP G +ASAS D++++LW GKF + F+ H PV + F
Sbjct: 13 RYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKF-SEFKAHTAPVRSVDFSAD 71
Query: 414 YCFRYPSN------FYCVVDMSCCMSLYS---W------SADSRLLLSGSKDSTLKV 455
F ++ + + SLY W S D RL++S S+D T+K+
Sbjct: 72 GQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 128
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 215 (80.7 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 75/268 (27%), Positives = 136/268 (50%)
Query: 142 PMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
P + TGH ++V + S+DG+ +SGS GEL+ WD TG + GH K + +++
Sbjct: 67 PFRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRR-FVGHDKDVLSVAF 125
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSG-------HTLAVTCVKWGGDG-- 252
+ R+ VSAS+D ++W+ +L +C + G H V+CV++ +
Sbjct: 126 -----SVDNRQIVSASRDRTIKLWN-TLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQ 179
Query: 253 -VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSP 310
I +GS D T+KVW T KL L+GHG +VN++A+S + +L +G D +
Sbjct: 180 PTIVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLA 239
Query: 311 EEMKKAALERYNKIKGN--APER--LVSGSDDFTMFLWEPAVSK------QPKTRMTGHQ 360
E + +L+ + I +P R L + + D ++ +W+ SK +P+ ++ +Q
Sbjct: 240 EGKRLYSLDAGSIIHSLCFSPNRYWLCAATQD-SIKIWD-LESKHIVQDLKPEIPVSKNQ 297
Query: 361 QLV-NHVYFSPDGQWVASASFDKSIKLW 387
L + +S DG + + D +I+++
Sbjct: 298 MLYCTSLNWSADGSTLYAGYTDGTIRIY 325
Score = 212 (79.7 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 58/193 (30%), Positives = 91/193 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D +RLWDL+T + GH VL +A+S D +
Sbjct: 71 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNR 130
Query: 164 HLVSGSKAGELQCWDP--QTGKPSGNPLSG---HKKWITGISWEPVHLNAPCRRFVSASK 218
+VS S+ ++ W+ + G L G H W++ + + P N VS S
Sbjct: 131 QIVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSP---NTFQPTIVSGSW 187
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIREL 277
D ++W+++ K L GH V V DG + +G +D +W+ +GK + L
Sbjct: 188 DRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGKRLYSL 247
Query: 278 KGHGHWVNSLALS 290
G ++SL S
Sbjct: 248 DA-GSIIHSLCFS 259
Score = 144 (55.7 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 46/165 (27%), Positives = 78/165 (47%)
Query: 106 GHTEAVLSVAFSPDGRQ-LASGSGDTTVRLWDLNTQT--------------PMFKCTGHK 150
GH + V ++A D + S S D ++ +WDL P + TGH
Sbjct: 16 GHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLTGHS 75
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
++V + S+DG+ +SGS GEL+ WD TG + GH K + +++ +
Sbjct: 76 HFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRR-FVGHDKDVLSVAF-----SVDN 129
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSG-------HTLAVTCVKW 248
R+ VSAS+D ++W+ +L +C + G H V+CV++
Sbjct: 130 RQIVSASRDRTIKLWN-TLGECKYTIGGDLGGGEGHNGWVSCVRF 173
Score = 124 (48.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 52/173 (30%), Positives = 77/173 (44%)
Query: 236 LSGHTLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L+GH+ V V DG +GS D +++W+ + G R GH V S+A S +
Sbjct: 71 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNR 130
Query: 295 -LRTGAFDHTGKQYSSPEEMKKAA---L---ERYN------KIKGNAPE-RLVSGSDDFT 340
+ + + D T K +++ E K L E +N + N + +VSGS D T
Sbjct: 131 QIVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDRT 190
Query: 341 MFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
+ +W K + + GH VN V SPDG AS D LW+ GK
Sbjct: 191 VKVWNLTNCKL-RCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGK 242
Score = 111 (44.1 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
P R+TGH V V S DGQ+ S S+D ++LW+ +TG F GH V + F
Sbjct: 67 PFRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFS 126
Query: 412 L 412
+
Sbjct: 127 V 127
Score = 109 (43.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 53/201 (26%), Positives = 87/201 (43%)
Query: 236 LSGHTLAVTCVKWGGDG--VIYTGSQDCTIKVWETTQ--------------GKLIRELKG 279
+ GH VT + D I + S+D ++ VW+ T G R L G
Sbjct: 14 MHGHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLTG 73
Query: 280 HGHWVNSLALSTE--YALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPER-L 332
H H+V + LS++ +AL +G++D + + + ++K + + R +
Sbjct: 74 HSHFVQDVVLSSDGQFAL-SGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNRQI 132
Query: 333 VSGSDDFTMFLWEPAVSKQPKT------RMTGHQQLVNHVYFSPDG--QWVASASFDKSI 384
VS S D T+ LW + + T GH V+ V FSP+ + S S+D+++
Sbjct: 133 VSASRDRTIKLWN-TLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDRTV 191
Query: 385 KLWNGTTGKFVAVFRGHVGPV 405
K+WN T K GH G V
Sbjct: 192 KVWNLTNCKLRCNLEGHGGYV 212
Score = 57 (25.1 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKV 455
M C SL +WSAD L +G D T+++
Sbjct: 298 MLYCTSL-NWSADGSTLYAGYTDGTIRI 324
Score = 47 (21.6 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 8/20 (40%), Positives = 16/20 (80%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
++S D+R ++S S+D T+K+
Sbjct: 124 AFSVDNRQIVSASRDRTIKL 143
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 235 (87.8 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 54/161 (33%), Positives = 85/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GHTEA+ SV +S D ++ S S D T+R+WD+ + TG+K + CI++S
Sbjct: 252 TLSGHTEAISSVLWS-DAEEICSASWDHTIRVWDVESGGLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHE----QQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGAD 406
Score = 170 (64.9 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 54/179 (30%), Positives = 87/179 (48%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GH + + WS D + + S S ++ WD ++G L+G+K +
Sbjct: 246 TRTPLVTLSGHTEAISSVLWS-DAEEICSASWDHTIRVWDVESGGLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT VKW +
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SP 310
+ +GS D +K+W+T K + +L H V S+ + L +G D+ YS SP
Sbjct: 358 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYSYSP 416
Score = 141 (54.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 62/274 (22%), Positives = 120/274 (43%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ I + + ++SGS + W + GK S + GH + ++W V
Sbjct: 96 QCMFHDDWISSIEGAEEW--ILSGSYDKTSRIWSLE-GK-SIMTIVGHTDVVKDVAW--V 149
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVI----CLSGHTLAVTCVKWGGDGVIY-TGSQ 259
++ ++AS D +W+ ++ K + C GH +V + G + +GS
Sbjct: 150 KKDSLSCLLLTASMDQTVLLWEWNVEKNKVKALHCCRGHAGSVDAIAVDSSGAKFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALE 319
D +K+W T E++ +T + + G +P E
Sbjct: 210 DKMLKIWSTVPTDEEDEMEE----------ATNRPRKKQKTEQLGLT-RTPLVTLSGHTE 258
Query: 320 RYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ + + E + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS S
Sbjct: 259 AISSVLWSDAEEICSASWDHTIRVWD-VESGGLKSTLTGNK-VFNCISYSPLCKRLASGS 316
Query: 380 FDKSIKLWNGTT--GKFVAV-FRGHVGPVYQIRF 410
D+ I+LW+ T G V++ H G V +++
Sbjct: 317 TDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Score = 139 (54.0 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 56/245 (22%), Positives = 110/245 (44%)
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+S + EL+ + T P H WI+ I + +S S D +RIW
Sbjct: 75 ISSEEVVELEYVEKYTA-PQPEQCMFHDDWISSIEGAEEWI-------LSGSYDKTSRIW 126
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGV---IYTGSQDCTIKVWE-TTQGKLIREL--- 277
+ K ++ + GHT V V W D + + T S D T+ +WE + ++ L
Sbjct: 127 SLE-GKSIMTIVGHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNVEKNKVKALHCC 185
Query: 278 KGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGS 336
+GH V+++A+ + A +G++D K +S+ ++ +E N P +
Sbjct: 186 RGHAGSVDAIAVDSSGAKFCSGSWDKMLKIWSTVPTDEEDEMEEAT----NRPRKKQKTE 241
Query: 337 DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA 396
+ +++ P ++GH + ++ V +S D + + SAS+D +I++W+ +G +
Sbjct: 242 --------QLGLTRTPLVTLSGHTEAISSVLWS-DAEEICSASWDHTIRVWDVESGGLKS 292
Query: 397 VFRGH 401
G+
Sbjct: 293 TLTGN 297
Score = 136 (52.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
Score = 123 (48.4 bits), Expect = 3.5e-11, Sum P(3) = 3.5e-11
Identities = 55/210 (26%), Positives = 90/210 (42%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLNNEEKL----PYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P A LS I+NKLL + +L + F I L VPL ++E +S E+V
Sbjct: 21 PFSIPAAAEVADLSNIINKLLETKNELHKHVEFDFLIKGQFLRVPLVKHMELENISSEEV 80
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ + Y + + +C H + + S+ + + + SGS D T R+W L ++
Sbjct: 81 VELEYVEK--YTAPQPEQCMF----HDDWISSIEGAEEW--ILSGSYDKTSRIWSLEGKS 132
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKW 195
M GH + V +AW D L++ S + W+ K L GH
Sbjct: 133 IM-TIVGHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNVEKNKVKALHCCRGH--- 188
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
G S + + +++ +F S S D +IW
Sbjct: 189 -AG-SVDAIAVDSSGAKFCSGSWDKMLKIW 216
Score = 106 (42.4 bits), Expect = 3.5e-11, Sum P(3) = 3.5e-11
Identities = 41/163 (25%), Positives = 75/163 (46%)
Query: 230 RKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
R ++ LSGHT A++ V W I + S D TI+VW+ G L L G+ + N ++
Sbjct: 247 RTPLVTLSGHTEAISSVLWSDAEEICSASWDHTIRVWDVESGGLKSTLTGNKVF-NCISY 305
Query: 290 STEYA-LRTGAFDHTGKQY---SSPEEMKKAALERYN----KIKGNAP--ERLVSGSDDF 339
S L +G+ D + + + + +L + +K + ++L+SGS D
Sbjct: 306 SPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDN 365
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ LW+ K P + H+ V V ++ G ++ + +K
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNK 408
Score = 100 (40.3 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 35/120 (29%), Positives = 55/120 (45%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG---NAP--ER 331
L GH ++S+ S + + ++DHT + + K+ L NK+ +P +R
Sbjct: 253 LSGHTEAISSVLWSDAEEICSASWDHTIRVWDVESGGLKSTLTG-NKVFNCISYSPLCKR 311
Query: 332 LVSGSDDFTMFLWEPAVSKQP--KTRMTGHQQLVNHVYFSPDG-QWVASASFDKSIKLWN 388
L SGS D + LW+P +T H V V +SP Q + S S D +KLW+
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWD 371
Score = 39 (18.8 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 437 WSADSRLLLSGSKDSTL 453
W+ D+ LLLSG D+ L
Sbjct: 394 WT-DTGLLLSGGADNKL 409
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 238 (88.8 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 82/315 (26%), Positives = 140/315 (44%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
+R +N + I G + FSP+ + LA+ +LW + + GH V
Sbjct: 218 LRSLNNFCSQI-GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNV 276
Query: 154 LCIAW------SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
I + S D K +L S + G ++ W + +P + + GH + + W H
Sbjct: 277 GAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVAD-IEGHTVRVARVMW---H 332
Query: 206 LNAPCRRFVSAS-KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
P RF+ + D R+WD+ ++ ++ GH++ V + + DG + TG D
Sbjct: 333 ---PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFG 389
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQ---------YSSPEEM 313
+VW+ G+ I L+GH + + S Y + TG+ D+T K Y+ P
Sbjct: 390 RVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 449
Query: 314 KKAALERYNKIKGNAPERLVSGSDDFTMFLW-EPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
++ I GN L++G+ D T +W P S P + GH+ V + S DG
Sbjct: 450 NLVTGVKFEPIHGNF---LLTGAYDNTAKIWTHPGWS--PLKTLAGHEGKVMGLDISSDG 504
Query: 373 QWVASASFDKSIKLW 387
Q +A+ S+D++ KLW
Sbjct: 505 QLIATCSYDRTFKLW 519
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 66/260 (25%), Positives = 110/260 (42%)
Query: 158 WSADGKHLVSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEP---VHLNAPCRRF 213
+S + K L + +G + W P + L GH + I + P V L+
Sbjct: 239 FSPNSKMLATACWSGLCKLWSVPDCNLL--HTLRGHNTNVGAIVFHPKSTVSLDPKDVNL 296
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
S + DG ++W + + V + GHT+ V V W G + T D + ++W+ +
Sbjct: 297 ASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQE 356
Query: 273 LIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERYNK-IKG-N-A 328
I +GH V +A + +L TG D G+ + LE + K I G N +
Sbjct: 357 EILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFS 416
Query: 329 PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP-DGQWVASASFDKSIK 385
P + +GS D T +W+ + T + HQ LV V F P G ++ + ++D + K
Sbjct: 417 PNGYHIATGSGDNTCKVWDLRQRRCVYT-IPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 475
Query: 386 LWNGTTGKFVAVFRGHVGPV 405
+W + GH G V
Sbjct: 476 IWTHPGWSPLKTLAGHEGKV 495
Score = 144 (55.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R RC + GH + + + FSP+G +A+GSGD T ++WDL + ++ H+
Sbjct: 391 VWDLR-TGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 449
Query: 151 NWVLCIAWSA-DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP 209
N V + + G L++G+ + W P L+GH+ + G+ +++
Sbjct: 450 NLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPL-KTLAGHEGKVMGLD-----ISSD 503
Query: 210 CRRFVSASKDGDARIW 225
+ + S D ++W
Sbjct: 504 GQLIATCSYDRTFKLW 519
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 230 (86.0 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 80/320 (25%), Positives = 138/320 (43%)
Query: 83 SIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTP 142
S++ + + R +N + + GHT VL F P G ASG D + LW++
Sbjct: 25 SLITEGSVLQRTSDLNVPNLQMFGHTAEVLVARFDPSGSYFASGGMDRQILLWNVFGDVK 84
Query: 143 MFKC-TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
+ G K + + WS D + + S L WD SG + HK ++
Sbjct: 85 NYGVLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAV----SGQKIRKHKGHAGVVNA 140
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
V L S S D ++WD + C+ + +T V G ++ G D
Sbjct: 141 LDV-LKVGSELLTSVSDDCTMKVWDSRSKDCIKTIE-EKYPLTAVAIAQQGTQVFIGGID 198
Query: 261 CTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTG-----KQYSSPE--- 311
IK+W+ LKGH + SLA+S + +L + + D+T K ++S +
Sbjct: 199 GAIKIWDLRNNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQL 258
Query: 312 EMKKAAL--ERYNK--IKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV 366
++ + A+ + +N + + R V +GS D +++W + + + + GH+ VNHV
Sbjct: 259 QIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKNVYVW--SATGDLRYVLPGHEGSVNHV 316
Query: 367 YFSPDGQWVASASFDKSIKL 386
F P + S S D++I L
Sbjct: 317 DFHPHQDIILSCSSDRTIFL 336
Score = 147 (56.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 64/256 (25%), Positives = 113/256 (44%)
Query: 213 FVSASKDGDARIWDV--SLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETT 269
F S D +W+V ++ + L+G A+T ++W D V+Y S D + W+
Sbjct: 65 FASGGMDRQILLWNVFGDVKNYGV-LNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAV 123
Query: 270 QGKLIRELKGHGHWVNSL-ALSTEYALRTGAFDH-TGKQYSS-PEEMKKAALERYN---- 322
G+ IR+ KGH VN+L L L T D T K + S ++ K E+Y
Sbjct: 124 SGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIEEKYPLTAV 183
Query: 323 KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
I + + G D + +W+ + + GH+ ++ + S DG + S S D
Sbjct: 184 AIAQQGTQVFIGGIDG-AIKIWDLR-NNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDN 241
Query: 383 SIKLWN----GTTGKFVAVFRGHV-GPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSW 437
++++++ + + + +F G + G + + L + S F V S ++Y W
Sbjct: 242 TVRIFDVKPFASAQRQLQIFEGAIHGQEHNL---LGVAWSRNSRF--VGAGSSDKNVYVW 296
Query: 438 SA--DSRLLLSGSKDS 451
SA D R +L G + S
Sbjct: 297 SATGDLRYVLPGHEGS 312
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 238 (88.8 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 82/315 (26%), Positives = 140/315 (44%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
+R +N + I G + FSP+ + LA+ +LW + + GH V
Sbjct: 233 LRSLNNFCSQI-GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNV 291
Query: 154 LCIAW------SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
I + S D K +L S + G ++ W + +P + + GH + + W H
Sbjct: 292 GAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD-IEGHTVRVARVMW---H 347
Query: 206 LNAPCRRFVSAS-KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
P RF+ + D R+WD+ ++ ++ GH++ V + + DG + TG D
Sbjct: 348 ---PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFG 404
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQ---------YSSPEEM 313
+VW+ G+ I L+GH + + S Y + TG+ D+T K Y+ P
Sbjct: 405 RVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 464
Query: 314 KKAALERYNKIKGNAPERLVSGSDDFTMFLW-EPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
++ I GN L++G+ D T +W P S P + GH+ V + S DG
Sbjct: 465 NLVTGVKFEPIHGNF---LLTGAYDNTAKIWTHPGWS--PLKTLAGHEGKVMGLDISSDG 519
Query: 373 QWVASASFDKSIKLW 387
Q +A+ S+D++ KLW
Sbjct: 520 QLIATCSYDRTFKLW 534
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 66/260 (25%), Positives = 110/260 (42%)
Query: 158 WSADGKHLVSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEP---VHLNAPCRRF 213
+S + K L + +G + W P + L GH + I + P V L+
Sbjct: 254 FSPNSKMLATACWSGLCKLWSVPDCNLL--HTLRGHNTNVGAIVFHPKSTVSLDQKDVNL 311
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
S + DG ++W + + V + GHT+ V V W G + T D + ++W+ +
Sbjct: 312 ASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQE 371
Query: 273 LIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERYNK-IKG-N-A 328
I +GH V +A + +L TG D G+ + LE + K I G N +
Sbjct: 372 EILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFS 431
Query: 329 PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP-DGQWVASASFDKSIK 385
P + +GS D T +W+ + T + HQ LV V F P G ++ + ++D + K
Sbjct: 432 PNGYHIATGSGDNTCKVWDLRQRRCVYT-IPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 490
Query: 386 LWNGTTGKFVAVFRGHVGPV 405
+W + GH G V
Sbjct: 491 IWTHPGWSPLKTLAGHEGKV 510
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R RC + GH + + + FSP+G +A+GSGD T ++WDL + ++ H+
Sbjct: 406 VWDLR-TGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 464
Query: 151 NWVLCIAWSA-DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP 209
N V + + G L++G+ + W P L+GH+ + G+ +++
Sbjct: 465 NLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPL-KTLAGHEGKVMGLD-----ISSD 518
Query: 210 CRRFVSASKDGDARIW 225
+ + S D ++W
Sbjct: 519 GQLIATCSYDRTFKLW 534
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 238 (88.8 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 82/315 (26%), Positives = 140/315 (44%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
+R +N + I G + FSP+ + LA+ +LW + + GH V
Sbjct: 235 LRSLNNFCSQI-GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNV 293
Query: 154 LCIAW------SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
I + S D K +L S + G ++ W + +P + + GH + + W H
Sbjct: 294 GAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD-IEGHTVRVARVMW---H 349
Query: 206 LNAPCRRFVSAS-KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
P RF+ + D R+WD+ ++ ++ GH++ V + + DG + TG D
Sbjct: 350 ---PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFG 406
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQ---------YSSPEEM 313
+VW+ G+ I L+GH + + S Y + TG+ D+T K Y+ P
Sbjct: 407 RVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 466
Query: 314 KKAALERYNKIKGNAPERLVSGSDDFTMFLW-EPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
++ I GN L++G+ D T +W P S P + GH+ V + S DG
Sbjct: 467 NLVTGVKFEPIHGNF---LLTGAYDNTAKIWTHPGWS--PLKTLAGHEGKVMGLDISSDG 521
Query: 373 QWVASASFDKSIKLW 387
Q +A+ S+D++ KLW
Sbjct: 522 QLIATCSYDRTFKLW 536
Score = 171 (65.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 66/260 (25%), Positives = 110/260 (42%)
Query: 158 WSADGKHLVSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEP---VHLNAPCRRF 213
+S + K L + +G + W P + L GH + I + P V L+
Sbjct: 256 FSPNSKMLATACWSGLCKLWSVPDCNLL--HTLRGHNTNVGAIVFHPKSTVSLDQKDVNL 313
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
S + DG ++W + + V + GHT+ V V W G + T D + ++W+ +
Sbjct: 314 ASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQE 373
Query: 273 LIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERYNK-IKG-N-A 328
I +GH V +A + +L TG D G+ + LE + K I G N +
Sbjct: 374 EILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFS 433
Query: 329 PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP-DGQWVASASFDKSIK 385
P + +GS D T +W+ + T + HQ LV V F P G ++ + ++D + K
Sbjct: 434 PNGYHIATGSGDNTCKVWDLRQRRCVYT-IPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 492
Query: 386 LWNGTTGKFVAVFRGHVGPV 405
+W + GH G V
Sbjct: 493 IWTHPGWSPLKTLAGHEGKV 512
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R RC + GH + + + FSP+G +A+GSGD T ++WDL + ++ H+
Sbjct: 408 VWDLR-TGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 466
Query: 151 NWVLCIAWSA-DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP 209
N V + + G L++G+ + W P L+GH+ + G+ +++
Sbjct: 467 NLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPL-KTLAGHEGKVMGLD-----ISSD 520
Query: 210 CRRFVSASKDGDARIW 225
+ + S D ++W
Sbjct: 521 GQLIATCSYDRTFKLW 536
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 239 (89.2 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 88/309 (28%), Positives = 143/309 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH + VL++ F+ R L +GS D+T+ +WDL T + + +GH + V + + D + L
Sbjct: 300 GHMDGVLTLQFNY--RLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYF--DDRKL 355
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI-SWEPVHLNAPCRRFVSASKDGDARI 224
++GS ++ W+ TG+ GH + + S++ V VS S D ++
Sbjct: 356 ITGSLDKTIRVWNYITGECIST-YRGHSDSVLSVDSYQKV--------IVSGSADKTVKV 406
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W V R C L GHT V CVK ++ S D TI++W+ ++ +GH
Sbjct: 407 WHVESRTCYT-LRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQ 465
Query: 284 VNSLALSTEYALRTGAFDHTGKQYSSPEE---MKKAA-------LERYNKIKGNAP--ER 331
V + T + A D+T SSP++ M A E+ + N P
Sbjct: 466 VQKIIPLTIKDVENLATDNTSDG-SSPQDDPTMTDGADESDTPSNEQETVLDENIPYPTH 524
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L+S D T+ LW+ K +T+ GH + V + + D + S S D SIK+W+ +
Sbjct: 525 LLSCGLDNTIKLWDVKTGKCIRTQF-GHVEGVWDI--AADNFRIISGSHDGSIKVWDLQS 581
Query: 392 GKFVAVFRG 400
GK + F G
Sbjct: 582 GKCMHTFNG 590
Score = 193 (73.0 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 53/159 (33%), Positives = 82/159 (51%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGK--QYSSP 310
+++TGS D TI +W+ GKLIR L GH V +L + L TG+ D T + Y +
Sbjct: 314 LLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFD-DRKLITGSLDKTIRVWNYITG 372
Query: 311 EEMKKAALERYNKIKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFS 369
E + + + ++ ++ +VSGS D T+ +W V + + GH + VN V
Sbjct: 373 ECISTYRGHSDSVLSVDSYQKVIVSGSADKTVKVWH--VESRTCYTLRGHTEWVNCVKLH 430
Query: 370 PDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
P S S D +I++W+ T + VFRGHVG V +I
Sbjct: 431 PKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQVQKI 469
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 54/189 (28%), Positives = 81/189 (42%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
+R T+ GHTE V V P S S DTT+R+WD+ T + + GH V I
Sbjct: 411 SRTCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQVQKII 470
Query: 158 --WSADGKHLVSGSKA-GELQCWDPQT--GKPSGNPLSGHKKWIT--GISWEPVHLNAPC 210
D ++L + + + G DP G + S ++ + I + P HL
Sbjct: 471 PLTIKDVENLATDNTSDGSSPQDDPTMTDGADESDTPSNEQETVLDENIPY-PTHL---- 525
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQ 270
+S D ++WDV KC+ GH V + +I +GS D +IKVW+
Sbjct: 526 ---LSCGLDNTIKLWDVKTGKCIRTQFGHVEGVWDIAADNFRII-SGSHDGSIKVWDLQS 581
Query: 271 GKLIRELKG 279
GK + G
Sbjct: 582 GKCMHTFNG 590
Score = 146 (56.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 39/136 (28%), Positives = 67/136 (49%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH++ V ++ F D R+L +GS D T+R+W+ T + GH + VL + + K
Sbjct: 338 LSGHSDGVKTLYF--DDRKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSV--DSYQK 393
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS ++ W ++ + L GH +W+ + P + C S S D R
Sbjct: 394 VIVSGSADKTVKVWHVESR--TCYTLRGHTEWVNCVKLHPKSFS--C---FSCSDDTTIR 446
Query: 224 IWDVSLRKCVICLSGH 239
+WD+ C+ GH
Sbjct: 447 MWDIRTNSCLKVFRGH 462
Score = 42 (19.8 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 438 SADSRLLLSGSKDSTLKV 455
+AD+ ++SGS D ++KV
Sbjct: 559 AADNFRIISGSHDGSIKV 576
>UNIPROTKB|Q5RCG7 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9601 "Pongo abelii" [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0014909 "smooth muscle cell migration"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:14 GeneTree:ENSGT00690000102167
HOVERGEN:HBG061307 OrthoDB:EOG4D26PX GO:GO:0001525 GO:GO:0010595
GO:GO:0014909 EMBL:CR858303 EMBL:CR859206 RefSeq:NP_001125288.1
UniGene:Pab.19266 ProteinModelPortal:Q5RCG7
Ensembl:ENSPPYT00000015307 GeneID:100172186 KEGG:pon:100172186
InParanoid:Q5RCG7 Uniprot:Q5RCG7
Length = 434
Score = 235 (87.8 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 89/349 (25%), Positives = 149/349 (42%)
Query: 85 VYQPQ--AVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQT 141
V +PQ V + + T A H+ +V V+ P LA +G D +W L+
Sbjct: 66 VLEPQEGVVGSMEGPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGE 125
Query: 142 PMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
+F+C GHK+ V C +S D + +G +G L+ W T + + +G +W+ W
Sbjct: 126 LLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEWM---EW 182
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
P AP ++ + DG+ +W V C G TC + DG G +D
Sbjct: 183 HP---RAPV--LLAGTADGNTWMWKVPNGDCKT-FQGPNCPATCGRVLPDGKRAVVGYED 236
Query: 261 CTIKVWETTQGKLIRELKG-HGHW--VNSLALSTEYAL-RTGAFDHTGKQYSS------- 309
TI++W+ QG I LKG GH + +A + + +L TG+ D K S+
Sbjct: 237 GTIRIWDLKQGSPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAKLVSATTGKVVG 296
Query: 310 ---PEEM-KKAALERYNKIKGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRM 356
PE + + +L + + N+ E L G D T+ +++ A Q
Sbjct: 297 VFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIYDLAT--QTLRHQ 354
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
HQ + + + V + S D ++LW+ TG+ + +RGH +
Sbjct: 355 CQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEI 403
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 55/204 (26%), Positives = 94/204 (46%)
Query: 118 PDGRQLASGSGDTTVRLWDLNTQTPM--FKCT-GHKNWVLCIAWSADGKHLVSGSKAGEL 174
PDG++ G D T+R+WDL +P+ K T GH+ + C+A + DG +++GS +
Sbjct: 225 PDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQA 284
Query: 175 QCWDPQTGKPSG--NPLSGHKKWITGISWEPVHLNAPCRRFVSASK-------DGDARIW 225
+ TGK G P + + G E + F S DG I+
Sbjct: 285 KLVSATTGKVVGVFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIY 344
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
D++ + + H + + W G V+YT S D +++W+ G+L+ + +GH +
Sbjct: 345 DLATQT-LRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEI 403
Query: 285 NSLALSTEYALR-TGAFDHTGKQY 307
ALS + +L T + DH K +
Sbjct: 404 LDFALSKDASLVVTTSGDHKAKVF 427
>UNIPROTKB|Q13685 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0014909 "smooth muscle cell
migration" evidence=IEP] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=ISS] [GO:0009986 "cell
surface" evidence=IDA] [GO:0001525 "angiogenesis" evidence=NAS]
[GO:0008201 "heparin binding" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005737
GO:GO:0009986 GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0008201
CTD:14 HOGENOM:HOG000261676 HOVERGEN:HBG061307 OrthoDB:EOG4D26PX
GO:GO:0001525 GO:GO:0010595 GO:GO:0014909 EMBL:M95627 EMBL:CR456755
EMBL:BC008809 EMBL:BC020244 EMBL:BC039866 IPI:IPI00014481
PIR:I39383 RefSeq:NP_001078.2 UniGene:Hs.83347
ProteinModelPortal:Q13685 SMR:Q13685 IntAct:Q13685
MINT:MINT-1418005 STRING:Q13685 PhosphoSite:Q13685 DMDM:62906874
PaxDb:Q13685 PRIDE:Q13685 Ensembl:ENST00000248450 GeneID:14
KEGG:hsa:14 UCSC:uc002vhk.3 GeneCards:GC02M219092 HGNC:HGNC:18
HPA:CAB017717 MIM:603488 neXtProt:NX_Q13685 PharmGKB:PA24365
InParanoid:Q13685 ChiTaRS:AAMP GenomeRNAi:14 NextBio:31
ArrayExpress:Q13685 Bgee:Q13685 CleanEx:HS_AAMP
Genevestigator:Q13685 GermOnline:ENSG00000127837 Uniprot:Q13685
Length = 434
Score = 235 (87.8 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 89/349 (25%), Positives = 149/349 (42%)
Query: 85 VYQPQ--AVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQT 141
V +PQ V + + T A H+ +V V+ P LA +G D +W L+
Sbjct: 66 VLEPQEGVVGSMEGPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGE 125
Query: 142 PMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
+F+C GHK+ V C +S D + +G +G L+ W T + + +G +W+ W
Sbjct: 126 LLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEWM---EW 182
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
P AP ++ + DG+ +W V C G TC + DG G +D
Sbjct: 183 HP---RAPV--LLAGTADGNTWMWKVPNGDCKT-FQGPNCPATCGRVLPDGKRAVVGYED 236
Query: 261 CTIKVWETTQGKLIRELKG-HGHW--VNSLALSTEYAL-RTGAFDHTGKQYSS------- 309
TI++W+ QG I LKG GH + +A + + +L TG+ D K S+
Sbjct: 237 GTIRIWDLKQGSPIHVLKGTEGHQGPLTCVAANQDGSLILTGSVDCQAKLVSATTGKVVG 296
Query: 310 ---PEEM-KKAALERYNKIKGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRM 356
PE + + +L + + N+ E L G D T+ +++ A Q
Sbjct: 297 VFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIYDLAT--QTLRHQ 354
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
HQ + + + V + S D ++LW+ TG+ + +RGH +
Sbjct: 355 CQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEI 403
Score = 168 (64.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 55/204 (26%), Positives = 94/204 (46%)
Query: 118 PDGRQLASGSGDTTVRLWDLNTQTPM--FKCT-GHKNWVLCIAWSADGKHLVSGSKAGEL 174
PDG++ G D T+R+WDL +P+ K T GH+ + C+A + DG +++GS +
Sbjct: 225 PDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTCVAANQDGSLILTGSVDCQA 284
Query: 175 QCWDPQTGKPSG--NPLSGHKKWITGISWEPVHLNAPCRRFVSASK-------DGDARIW 225
+ TGK G P + + G E + F S DG I+
Sbjct: 285 KLVSATTGKVVGVFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIY 344
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
D++ + + H + + W G V+YT S D +++W+ G+L+ + +GH +
Sbjct: 345 DLATQT-LRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEI 403
Query: 285 NSLALSTEYALR-TGAFDHTGKQY 307
ALS + +L T + DH K +
Sbjct: 404 LDFALSKDASLVVTTSGDHKAKVF 427
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 237 (88.5 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 81/315 (25%), Positives = 142/315 (45%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
+R +N + I G + FSP+ + LA+ +LW + + + GH V
Sbjct: 217 LRSLNNFCSQI-GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNV 275
Query: 154 LCIAW------SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
I + S D K +L S + G ++ W + +P + + GH + + W H
Sbjct: 276 GAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD-IEGHTVRVARVMW---H 331
Query: 206 LNAPCRRFVSAS-KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
P RF+ + D R+WD+ ++ ++ GH++ V + + DG + TG D
Sbjct: 332 ---PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFG 388
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQ---------YSSPEEM 313
+VW+ G+ I L+GH + ++ S Y + TG+ D+T K Y+ P
Sbjct: 389 RVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 448
Query: 314 KKAALERYNKIKGNAPERLVSGSDDFTMFLW-EPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
++ I G+ L++G+ D T +W P S P + GH+ V + S DG
Sbjct: 449 NLVTGVKFEPIHGDF---LLTGAYDNTAKIWTHPGWS--PLKTLAGHEGKVMGLDISSDG 503
Query: 373 QWVASASFDKSIKLW 387
Q +A+ S+D++ KLW
Sbjct: 504 QLIATCSYDRTFKLW 518
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 65/260 (25%), Positives = 109/260 (41%)
Query: 158 WSADGKHLVSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEP---VHLNAPCRRF 213
+S + K L + +G + W P + L GH + I + P V L+
Sbjct: 238 FSPNSKMLATACWSGLCKLWSVPDCSLL--HTLRGHNTNVGAIVFHPKSTVSLDQKDVNL 295
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
S + DG ++W + + V + GHT+ V V W G + T D + ++W+ +
Sbjct: 296 ASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQE 355
Query: 273 LIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERYNK-IKGNA-- 328
I +GH V +A + +L TG D G+ + LE + K I G +
Sbjct: 356 EILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFS 415
Query: 329 PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP-DGQWVASASFDKSIK 385
P + +GS D T +W+ + T + HQ LV V F P G ++ + ++D + K
Sbjct: 416 PNGYHIATGSGDNTCKVWDLRQRRCVYT-IPAHQNLVTGVKFEPIHGDFLLTGAYDNTAK 474
Query: 386 LWNGTTGKFVAVFRGHVGPV 405
+W + GH G V
Sbjct: 475 IWTHPGWSPLKTLAGHEGKV 494
Score = 146 (56.5 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 34/136 (25%), Positives = 67/136 (49%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R RC + GH + + ++FSP+G +A+GSGD T ++WDL + ++ H+
Sbjct: 390 VWDLR-TGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 448
Query: 151 NWVLCIAWSA-DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP 209
N V + + G L++G+ + W P L+GH+ + G+ +++
Sbjct: 449 NLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPL-KTLAGHEGKVMGLD-----ISSD 502
Query: 210 CRRFVSASKDGDARIW 225
+ + S D ++W
Sbjct: 503 GQLIATCSYDRTFKLW 518
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 231 (86.4 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 73/298 (24%), Positives = 138/298 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH VL +SPD R + S S D + +WD T T W++ A++ G
Sbjct: 66 LKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGN 125
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI-TGISWEP--VHLNAPCRRFVSASKDG 220
+ G ++ + P T S ++ K+ + T S+ ++ N+ ++ ++ S D
Sbjct: 126 FVACGGLDNKVTVY-PIT---SDEEMAAKKRTVGTHTSYMSCCIYPNSD-QQILTGSGDS 180
Query: 221 DARIWDVSLRKCVICLSGHT---LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
+WDV + + GH+ +A+ +GS D +W+ G +++
Sbjct: 181 TCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSF 240
Query: 278 KGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG-NAPERLVSG 335
+GH VNS+ A+ TG+ D + + Y + + A + + I G N+ + VSG
Sbjct: 241 EGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSG 300
Query: 336 S------DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
+D+T+ LW+ S++ + GH+ V+ V SPDG +++ S+D +I++W
Sbjct: 301 RLLFAGYNDYTVNLWDTLKSERV-CLLYGHENKVSCVQVSPDGTALSTGSWDYTIRVW 357
Score = 181 (68.8 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 54/208 (25%), Positives = 100/208 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI--AWSA 160
T+ HT + + +Q+ +GSGD+T LWD+ + + GH V+ I A +
Sbjct: 153 TVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNE 212
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA-SKD 219
G VSGS WD ++G + GH+ + + + H PC ++ S D
Sbjct: 213 TGNTFVSGSCDRMAFIWDMRSGHVVQS-FEGHQSDVNSVKF---H---PCGDAIATGSDD 265
Query: 220 GDARIWDVSLRKCVICLSGHTL--AVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRE 276
R++D+ + V + ++ V V + G +++ G D T+ +W+T + + +
Sbjct: 266 SSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSERVCL 325
Query: 277 LKGHGHWVNSLALSTE-YALRTGAFDHT 303
L GH + V+ + +S + AL TG++D+T
Sbjct: 326 LYGHENKVSCVQVSPDGTALSTGSWDYT 353
Score = 175 (66.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 64/275 (23%), Positives = 119/275 (43%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GH+ VLC WS D +H++S S+ G L WD T + ++ WI ++
Sbjct: 68 GHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKE-HAVTMPTTWIMACAY------ 120
Query: 208 APCRRFVSASK-DGDARIWDVSLRKCVIC----LSGHTLAVTCVKW-GGDGVIYTGSQDC 261
AP FV+ D ++ ++ + + + HT ++C + D I TGS D
Sbjct: 121 APSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDS 180
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALS---TEYALRTGAFDHTGKQYSSPEEMKKAAL 318
T +W+ G+L++ GH V ++ L+ T +G+ D + +
Sbjct: 181 TCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSF 240
Query: 319 ERY----NKIKGN-APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL---VNHVYFSP 370
E + N +K + + + +GSDD + L++ ++ + + + VN V FS
Sbjct: 241 EGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADRE--VAVFAKESIIFGVNSVDFSV 298
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
G+ + + D ++ LW+ + V + GH V
Sbjct: 299 SGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKV 333
Score = 136 (52.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 49/188 (26%), Positives = 78/188 (41%)
Query: 236 LSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-Y 293
L GH V C W D I + SQD + +W+ + W+ + A +
Sbjct: 66 LKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGN 125
Query: 294 ALRTGAFDHTGKQY--SSPEEM--KKAALERYNK-----IKGNAPERLVSGSDDFTMFLW 344
+ G D+ Y +S EEM KK + + I N+ +++++GS D T LW
Sbjct: 126 FVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALW 185
Query: 345 EPAVSKQPKTRMTGHQQLVNHVYFSPD--GQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
+ S Q GH V + +P+ G S S D+ +W+ +G V F GH
Sbjct: 186 D-VESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQ 244
Query: 403 GPVYQIRF 410
V ++F
Sbjct: 245 SDVNSVKF 252
Score = 119 (46.9 bits), Expect = 0.00031, P = 0.00031
Identities = 56/226 (24%), Positives = 90/226 (39%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDV-SLRKCVICLSGHTLAVTCVK 247
L GH+ + W P R +S+S+DG IWD + K T + C
Sbjct: 66 LKGHQAKVLCTDWSPDK-----RHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAY 120
Query: 248 WGGDGVIYTGSQDCTIKVWETTQGKLI----RELKGHGHWVNSLAL-STEYALRTGAFDH 302
+ G D + V+ T + + R + H +++ +++ + TG+ D
Sbjct: 121 APSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDS 180
Query: 303 TGKQYSSPEEMKKAALERYNKIKGN------APER----LVSGSDDFTMFLWEPAVSKQP 352
T + L+ ++ G+ AP VSGS D F+W+ S
Sbjct: 181 TCALWDVESGQ---LLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMR-SGHV 236
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVF 398
GHQ VN V F P G +A+ S D S +L++ + VAVF
Sbjct: 237 VQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREVAVF 282
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 238 (88.8 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 90/296 (30%), Positives = 138/296 (46%)
Query: 99 RC-SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
RC ++GH++ V+ + + LASGS D T+RLW+L T + GH + V C+
Sbjct: 263 RCRQVVLSGHSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQ 320
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+ D L+SGS ++ W+ +T + + L GH + ++++ L VS S
Sbjct: 321 F--DQCKLISGSMDKTIRIWNYRTSECI-SILHGHTDSVLCLTFDSTLL-------VSGS 370
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRE 276
D ++W S K I L GHT V V+ D G++ +GS D TIK+W +
Sbjct: 371 ADCTVKLWHFSGGKR-ITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHT 429
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN---APE--R 331
H V SLAL+ + L + + D T KQ+ E KK + I+G A + R
Sbjct: 430 FSAHIGPVQSLALA-DSRLFSCSLDGTIKQWDI--EKKKCVHTLFGHIEGVWEIAADHLR 486
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
L+SG+ D + +WE + H + V V D + V S S D I LW
Sbjct: 487 LISGAHDGVVKVWEACECVHT---LKNHSEPVTSVALG-DCE-VVSGSEDGKIYLW 537
Score = 182 (69.1 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 58/193 (30%), Positives = 89/193 (46%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
+ C + + GHT++VL + F D L SGS D TV+LW + + GH V +
Sbjct: 343 SECISILHGHTDSVLCLTF--DSTLLVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVR 399
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
D ++SGS ++ W +T + S H + ++ A R F S S
Sbjct: 400 IIRDRGLVLSGSDDSTIKIWSLETNTCL-HTFSAHIGPVQSLAL------ADSRLF-SCS 451
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRE 276
DG + WD+ +KCV L GH V + D + + +G+ D +KVWE + +
Sbjct: 452 LDGTIKQWDIEKKKCVHTLFGHIEGVWEI--AADHLRLISGAHDGVVKVWEACE--CVHT 507
Query: 277 LKGHGHWVNSLAL 289
LK H V S+AL
Sbjct: 508 LKNHSEPVTSVAL 520
Score = 174 (66.3 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 66/237 (27%), Positives = 107/237 (45%)
Query: 234 ICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY 293
+ LSGH+ V C++ + ++ +GS D TI++W + + L+GH V L +
Sbjct: 267 VVLSGHSDGVMCLQLVRN-ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFD-QC 324
Query: 294 ALRTGAFDHTGK--QYSSPE--EMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVS 349
L +G+ D T + Y + E + + + ++ LVSGS D T+ LW +
Sbjct: 325 KLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDST-LLVSGSADCTVKLWHFSGG 383
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
K+ R GH VN V D V S S D +IK+W+ T + F H+GPV +
Sbjct: 384 KRITLR--GHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLA 441
Query: 410 F---ELIYCFRYPS-NFYCVVDMSCCMSLYS-----W--SADSRLLLSGSKDSTLKV 455
L C + + + C +L+ W +AD L+SG+ D +KV
Sbjct: 442 LADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADHLRLISGAHDGVVKV 498
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 227 (85.0 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 67/226 (29%), Positives = 115/226 (50%)
Query: 107 HTEAVLSVAFSPDGRQL-ASGSGDTTVRLWDLNTQTPMF-----KCTGHKNWVLCIAWSA 160
HT+ V ++A D + + S D ++ LW L + + TGH ++V + S+
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSS 73
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +SGS GEL+ WD TG+ + GH K + +++ + R+ VSAS+D
Sbjct: 74 DGQFALSGSWDGELRLWDLATGETTRR-FVGHTKDVLSVAFSTDN-----RQIVSASRDR 127
Query: 221 DARIWDVSLRKCVICLS---GHTLAVTCVKWGGDGVIYT---GSQDCTIKVWETTQGKLI 274
++W+ +L +C +S GH V+CV++ + ++ T S D T+KVW KL
Sbjct: 128 TIKLWN-TLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR 186
Query: 275 RELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALE 319
L GH ++N++A+S + +L +G D + E K +LE
Sbjct: 187 NSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
Score = 226 (84.6 bits), Expect = 7.0e-17, P = 7.0e-17
Identities = 59/189 (31%), Positives = 95/189 (50%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D +RLWDL T + GH VL +A+S D +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR 118
Query: 164 HLVSGSKAGELQCWDPQTG-KPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+VS S+ ++ W+ K + + GHK+W++ + + P N VSAS D
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSP---NTLVPTIVSASWDKTV 175
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
++W++ K L GH+ + V DG + +G +D I +W+ +GK + L+ G
Sbjct: 176 KVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-G 234
Query: 282 HWVNSLALS 290
++SL S
Sbjct: 235 SIIHSLCFS 243
Score = 186 (70.5 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 80/323 (24%), Positives = 144/323 (44%)
Query: 149 HKNWVLCIAWSADGKHL-VSGSKAGELQCW----DPQTGKPSGNPLSGHKKWITGISWEP 203
H + V IA D + V+ S+ + W D ++ + L+GH ++ E
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFV-----ED 68
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
V L++ + +S S DG+ R+WD++ + GHT V V + D I + S+D T
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRT 128
Query: 263 IKVWETT-QGKL-IRELKGHGHWVNSLALSTEYALRT---GAFDHTGKQYSSPE-EMKKA 316
IK+W T + K I E GH WV+ + S + T ++D T K ++ +++ +
Sbjct: 129 IKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNS 188
Query: 317 ALER--YNKIKGNAPERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+ Y +P+ + SG D + LW+ A K+ + G +++ + FSP+
Sbjct: 189 LVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG--SIIHSLCFSPNR 246
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCM 432
W+ +A+ + SI++W+ + V + + + + YC
Sbjct: 247 YWLCAAT-ENSIRIWDLESKSVVEDLKVDLKSEAEKNEGGVGTGNQKKVIYCT------- 298
Query: 433 SLYSWSADSRLLLSGSKDSTLKV 455
SL +WSAD L SG D ++V
Sbjct: 299 SL-NWSADGSTLFSGYTDGVVRV 320
Score = 147 (56.8 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 54/185 (29%), Positives = 89/185 (48%)
Query: 236 LSGHTLAVTCVKWGGDG--VIYTGSQDCTIKVWETTQ-----GKLIRELKGHGHWVNSLA 288
+ HT VT + D +I T S+D +I +W+ T+ G R L GH H+V +
Sbjct: 11 MRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVV 70
Query: 289 LSTE--YALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKGNA----PERLVSGSDDFTM 341
LS++ +AL +G++D + + + E + + + A ++VS S D T+
Sbjct: 71 LSSDGQFAL-SGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTI 129
Query: 342 FLWEP-AVSKQPKTRMTGHQQLVNHVYFSPDG--QWVASASFDKSIKLWNGTTGKFVAVF 398
LW K + GH++ V+ V FSP+ + SAS+DK++K+WN K
Sbjct: 130 KLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSL 189
Query: 399 RGHVG 403
GH G
Sbjct: 190 VGHSG 194
Score = 142 (55.0 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 63/221 (28%), Positives = 95/221 (42%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW-----DVSLRKCVICLSGHTLAV 243
+ H +T I+ P+ N+ V+AS+D +W D S L+GH+ V
Sbjct: 11 MRAHTDIVTAIA-TPID-NSDI--IVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
V DG +GS D +++W+ G+ R GH V S+A ST+ + + + D
Sbjct: 67 EDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRD 126
Query: 302 HTGKQYSSPEEMKKAALE-----RYNKIKGNAPERLV----SGSDDFTMFLWEPAVSKQP 352
T K +++ E K E + +P LV S S D T+ +W K
Sbjct: 127 RTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKL- 185
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
+ + GH +N V SPDG AS D I LW+ GK
Sbjct: 186 RNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK 226
Score = 136 (52.9 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 53/179 (29%), Positives = 76/179 (42%)
Query: 97 VNRCSATIA---GHTEAVLSVAFSPDGR--QLASGSGDTTVRLWDLNTQTPMFKCTGHKN 151
+ C TI+ GH E V V FSP+ + S S D TV++W+L GH
Sbjct: 135 LGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSG 194
Query: 152 WVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCR 211
++ +A S DG SG K G + WD GK + +G I + + P N R
Sbjct: 195 YLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG--SIIHSLCFSP---N---R 246
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD----CTIKVW 266
++ A+ + RIWD+ + V L + GG G TG+Q CT W
Sbjct: 247 YWLCAATENSIRIWDLESKSVVEDLKVDLKSEAEKNEGGVG---TGNQKKVIYCTSLNW 302
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 233 (87.1 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 60/206 (29%), Positives = 96/206 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ TG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTMKMWEVATGY-CVKTFTGHREWVRMV--RP---NQDGTLLASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDISTGMCLMTLVGHDNWVRGV 344
Score = 221 (82.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 66/224 (29%), Positives = 103/224 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP--VH------------ 205
DG L S S ++ W T K L H+ + ISW P H
Sbjct: 244 QDGTLLASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESAHPTISEATGSENK 302
Query: 206 -LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDCT 262
P +S S+D ++WD+S C++ L GH V V + GG V+ + + D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVV-SCADDKT 361
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+++W+ + ++ L H H+V SL + TG+ D T K
Sbjct: 362 LRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVK 405
Score = 211 (79.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 62/189 (32%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG LAS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 ADGKH--------------------LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ H L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDGVIYTGS 258
+ P R VS + D RIWD ++C+ LS H VT + + + TGS
Sbjct: 345 LFHPGG-----RFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 194 (73.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 59/204 (28%), Positives = 93/204 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTMK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V+ CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTEYALRTGAFDHTGKQ 306
V ++ + E A T + + TG +
Sbjct: 278 VVECISWAPESAHPTIS-EATGSE 300
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 67/229 (29%), Positives = 104/229 (45%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + ++ + S+D TIKVW+ G R LKGH V ++ T
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D TM +WE A
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTMKMWEVA 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKV 455
++ C + P + + + + LLSGS+D T+K+
Sbjct: 277 ---HVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKM 322
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 58/226 (25%), Positives = 101/226 (44%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SLMVSASEDATIKVWDYEAGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFL 311
Score = 143 (55.4 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 43/184 (23%), Positives = 80/184 (43%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD + G L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFE-RTLKGHTDSVQDISFDQ 160
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
+ S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 161 TG-----KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
T+K+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 49/192 (25%), Positives = 80/192 (41%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL 273
VSAS+D ++W+V+ CV +GH V V+ DG + C+ +
Sbjct: 208 VSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLAS---CS-------NDQT 257
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERY---NKIKGNAP 329
+R WV + E +H + S +PE E NK G
Sbjct: 258 VRV------WV---VATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPG 308
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
L+SGS D T+ +W+ + T + GH V V F P G++V S + DK++++W+
Sbjct: 309 PFLLSGSRDKTIKMWDISTGMCLMT-LVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 390 TTGKFVAVFRGH 401
+ + H
Sbjct: 368 KNKRCMKTLSAH 379
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 215 (80.7 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 51/158 (32%), Positives = 84/158 (53%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 133 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 192
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ +D Q +G LSGH W+ +++ P + FVS+S D ++WDV R
Sbjct: 193 DGYIKIYDVQHANLAGT-LSGHASWVLNVAFCPDDTH-----FVSSSSDKSVKVWDVGTR 246
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
CV H V VK+ G+G I + D I +++
Sbjct: 247 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 284
Score = 177 (67.4 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 52/164 (31%), Positives = 84/164 (51%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AG +A ++AFSPD + LA+G+ V ++ + + + ++L IA+S DGK+
Sbjct: 86 AGPVDA-WTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 144
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L SG+ G + +D TGK + L GH I +++ P + V+AS DG +I
Sbjct: 145 LASGAIDGIINIFDIATGKLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKI 198
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWE 267
+DV LSGH V V + D + + S D ++KVW+
Sbjct: 199 YDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 242
Score = 168 (64.2 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 50/180 (27%), Positives = 85/180 (47%)
Query: 112 LSVAFSPDGRQLASGSGDTTVRLWDLNT--QTPMFKCTGHKNWVLCIAWSADGKHLVSGS 169
L + +S +G QL G +VRLWDL Q W L A+S D ++L +G+
Sbjct: 54 LDLQWSLEGHQL----GVVSVRLWDLENGKQIKSIDAGPVDAWTL--AFSPDSQYLATGT 107
Query: 170 KAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSL 229
G++ + ++GK + L K+I I++ P + S + DG I+D++
Sbjct: 108 HVGKVNIFGVESGKKEYS-LDTRGKFILSIAYSP-----DGKYLASGAIDGIINIFDIAT 161
Query: 230 RKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLA 288
K + L GH + + + + D ++ T S D IK+++ L L GH WV ++A
Sbjct: 162 GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVA 221
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FSPD + L + S D ++++D+ +GH +WVL +A+ D
Sbjct: 167 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 226
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD T + + H+ + G+ + N + VS D +
Sbjct: 227 THFVSSSSDKSVKVWDVGT-RTCVHTFFDHQDQVWGVKY-----NGNGSKIVSVGDDQEI 280
Query: 223 RIWD 226
I+D
Sbjct: 281 HIYD 284
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ ++ N + T++GH VL+VAF PD S S D +V++WD+ T+T + H+
Sbjct: 198 IYDVQHAN-LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQ 256
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWD 178
+ V + ++ +G +VS E+ +D
Sbjct: 257 DQVWGVKYNGNGSKIVSVGDDQEIHIYD 284
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 47/195 (24%), Positives = 86/195 (44%)
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K + + + + + D + TG+ + ++ GK L G
Sbjct: 71 RLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRG 130
Query: 282 HWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNK-IKGN--APER--LVSG 335
++ S+A S + L +GA D + LE + I+ +P+ LV+
Sbjct: 131 KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTA 190
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
SDD + +++ + T ++GH V +V F PD S+S DKS+K+W+ T V
Sbjct: 191 SDDGYIKIYDVQHANLAGT-LSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV 249
Query: 396 AVFRGHVGPVYQIRF 410
F H V+ +++
Sbjct: 250 HTFFDHQDQVWGVKY 264
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 233 (87.1 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 54/161 (33%), Positives = 85/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GH EAV SV +S D ++ S S D T+R+WD+ + + TG+K + CI++S
Sbjct: 252 TLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVESGSLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHE----QQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGAD 406
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 54/176 (30%), Positives = 86/176 (48%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GH V + WS D + + S S ++ WD ++G L+G+K +
Sbjct: 246 TRTPVVTLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVESGSLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT VKW +
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ +GS D +K+W+T K + +L H V S+ + L +G D+ K YS
Sbjct: 358 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN--KLYS 411
Score = 154 (59.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 64/274 (23%), Positives = 122/274 (44%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ I + + +++GS + W + GK S + GH + ++W V
Sbjct: 96 QCMFHDDWISSIKGAEEW--ILTGSYDKTSRIWSLE-GK-SIMTIVGHTDVVKDVAW--V 149
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGVIY-TGSQ 259
++ +SAS D +W+ ++ K + C GH +V + G G + +GS
Sbjct: 150 KKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALE 319
D +K+W T E++ ST + + G +P +E
Sbjct: 210 DKMLKIWSTVPTDEEDEMEE----------STNRPRKKQKTEQLGLT-RTPVVTLSGHME 258
Query: 320 RYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ + + E + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS S
Sbjct: 259 AVSSVLWSDAEEICSASWDHTIRVWD-VESGSLKSTLTGNK-VFNCISYSPLCKRLASGS 316
Query: 380 FDKSIKLWNGTT--GKFVAV-FRGHVGPVYQIRF 410
D+ I+LW+ T G V++ H G V +++
Sbjct: 317 TDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Score = 136 (52.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
Score = 133 (51.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 56/247 (22%), Positives = 111/247 (44%)
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+S + E++ + T P H WI+ I + ++ S D +RIW
Sbjct: 75 ISSEEVVEIEYVEKYTA-PQPEQCMFHDDWISSIKGAEEWI-------LTGSYDKTSRIW 126
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGV---IYTGSQDCTIKVWE-TTQGKLIREL--- 277
+ K ++ + GHT V V W D + + + S D TI +WE + ++ L
Sbjct: 127 SLE-GKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCC 185
Query: 278 KGHGHWVNSLALS---TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVS 334
+GH V+S+A+ T++ +G++D K +S+ ++ +E N P +
Sbjct: 186 RGHAGSVDSIAVDGSGTKFC--SGSWDKMLKIWSTVPTDEEDEMEEST----NRPRKKQK 239
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
+ +++ P ++GH + V+ V +S D + + SAS+D +I++W+ +G
Sbjct: 240 TE--------QLGLTRTPVVTLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVESGSL 290
Query: 395 VAVFRGH 401
+ G+
Sbjct: 291 KSTLTGN 297
Score = 117 (46.2 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 54/210 (25%), Positives = 90/210 (42%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLN--NE--EKLPYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P + LS I+NKLL NE + + + F I L +PL ++E +S E+V
Sbjct: 21 PFSIPAASEIADLSNIINKLLKDKNEFHKHVEFDFLIKGQFLRMPLDKHMEMENISSEEV 80
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ I Y + + +C H + + S+ + + + +GS D T R+W L ++
Sbjct: 81 VEIEYVEK--YTAPQPEQCMF----HDDWISSIKGAEEW--ILTGSYDKTSRIWSLEGKS 132
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKW 195
M GH + V +AW D L+S S + W+ + L GH
Sbjct: 133 IM-TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGH--- 188
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
G S + + ++ +F S S D +IW
Sbjct: 189 -AG-SVDSIAVDGSGTKFCSGSWDKMLKIW 216
Score = 106 (42.4 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 42/163 (25%), Positives = 74/163 (45%)
Query: 230 RKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
R V+ LSGH AV+ V W I + S D TI+VW+ G L L G+ + N ++
Sbjct: 247 RTPVVTLSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVESGSLKSTLTGNKVF-NCISY 305
Query: 290 STEYA-LRTGAFDHTGKQY---SSPEEMKKAALERYN----KIKGNAP--ERLVSGSDDF 339
S L +G+ D + + + + +L + +K + ++L+SGS D
Sbjct: 306 SPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDN 365
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ LW+ K P + H+ V V ++ G ++ + +K
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNK 408
Score = 102 (41.0 bits), Expect = 4.2e-10, Sum P(3) = 4.2e-10
Identities = 36/120 (30%), Positives = 55/120 (45%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG---NAP--ER 331
L GH V+S+ S + + ++DHT + + K+ L NK+ +P +R
Sbjct: 253 LSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVESGSLKSTLTG-NKVFNCISYSPLCKR 311
Query: 332 LVSGSDDFTMFLWEPAVSKQP--KTRMTGHQQLVNHVYFSPDG-QWVASASFDKSIKLWN 388
L SGS D + LW+P +T H V V +SP Q + S S D +KLW+
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWD 371
Score = 39 (18.8 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 437 WSADSRLLLSGSKDSTL 453
W+ D+ LLLSG D+ L
Sbjct: 394 WT-DTGLLLSGGADNKL 409
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 233 (87.1 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 54/161 (33%), Positives = 85/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GH EAV SV +S D ++ S S D T+R+WD+ + + TG+K + CI++S
Sbjct: 252 TLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVESGSLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHE----QQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGAD 406
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 54/176 (30%), Positives = 86/176 (48%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GH V + WS D + + S S ++ WD ++G L+G+K +
Sbjct: 246 TRTPIVTLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVESGSLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT VKW +
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ +GS D +K+W+T K + +L H V S+ + L +G D+ K YS
Sbjct: 358 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN--KLYS 411
Score = 153 (58.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 64/274 (23%), Positives = 122/274 (44%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ I + + +++GS + W + GK S + GH + ++W V
Sbjct: 96 QCMFHDDWISSIKGAEEW--ILTGSYDKTSRIWSLE-GK-SIMTIVGHTDVVKDVAW--V 149
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGVIY-TGSQ 259
++ +SAS D +W+ ++ K + C GH +V + G G + +GS
Sbjct: 150 KKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALE 319
D +K+W T E++ ST + + G +P +E
Sbjct: 210 DKMLKIWSTVPTDEEDEMEE----------STNRPRKKQKTEQLGLT-RTPIVTLSGHME 258
Query: 320 RYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ + + E + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS S
Sbjct: 259 AVSSVLWSDAEEICSASWDHTIRVWD-VESGSLKSTLTGNK-VFNCISYSPLCKRLASGS 316
Query: 380 FDKSIKLWNGTT--GKFVAV-FRGHVGPVYQIRF 410
D+ I+LW+ T G V++ H G V +++
Sbjct: 317 TDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Score = 136 (52.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
Score = 132 (51.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 56/247 (22%), Positives = 111/247 (44%)
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+S + E++ + T P H WI+ I + ++ S D +RIW
Sbjct: 75 ISSEEVVEIEYVEKYTA-PQPEQCMFHDDWISSIKGAEEWI-------LTGSYDKTSRIW 126
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGV---IYTGSQDCTIKVWE-TTQGKLIREL--- 277
+ K ++ + GHT V V W D + + + S D TI +WE + ++ L
Sbjct: 127 SLE-GKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCC 185
Query: 278 KGHGHWVNSLALS---TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVS 334
+GH V+S+A+ T++ +G++D K +S+ ++ +E N P +
Sbjct: 186 RGHAGSVDSIAVDGSGTKFC--SGSWDKMLKIWSTVPTDEEDEMEEST----NRPRKKQK 239
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
+ +++ P ++GH + V+ V +S D + + SAS+D +I++W+ +G
Sbjct: 240 TE--------QLGLTRTPIVTLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVESGSL 290
Query: 395 VAVFRGH 401
+ G+
Sbjct: 291 KSTLTGN 297
Score = 117 (46.2 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 54/210 (25%), Positives = 90/210 (42%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLN--NE--EKLPYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P + LS I+NKLL NE + + + F I L +PL ++E +S E+V
Sbjct: 21 PFSIPAASEIADLSNIINKLLKDKNEFHKHVEFDFLIKGQFLRMPLDKHMEMENISSEEV 80
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ I Y + + +C H + + S+ + + + +GS D T R+W L ++
Sbjct: 81 VEIEYVEK--YTAPQPEQCMF----HDDWISSIKGAEEW--ILTGSYDKTSRIWSLEGKS 132
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKW 195
M GH + V +AW D L+S S + W+ + L GH
Sbjct: 133 IM-TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGH--- 188
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
G S + + ++ +F S S D +IW
Sbjct: 189 -AG-SVDSIAVDGSGTKFCSGSWDKMLKIW 216
Score = 105 (42.0 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 41/163 (25%), Positives = 74/163 (45%)
Query: 230 RKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
R ++ LSGH AV+ V W I + S D TI+VW+ G L L G+ + N ++
Sbjct: 247 RTPIVTLSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVESGSLKSTLTGNKVF-NCISY 305
Query: 290 STEYA-LRTGAFDHTGKQY---SSPEEMKKAALERYN----KIKGNAP--ERLVSGSDDF 339
S L +G+ D + + + + +L + +K + ++L+SGS D
Sbjct: 306 SPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDN 365
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ LW+ K P + H+ V V ++ G ++ + +K
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNK 408
Score = 102 (41.0 bits), Expect = 4.2e-10, Sum P(3) = 4.2e-10
Identities = 36/120 (30%), Positives = 55/120 (45%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG---NAP--ER 331
L GH V+S+ S + + ++DHT + + K+ L NK+ +P +R
Sbjct: 253 LSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVESGSLKSTLTG-NKVFNCISYSPLCKR 311
Query: 332 LVSGSDDFTMFLWEPAVSKQP--KTRMTGHQQLVNHVYFSPDG-QWVASASFDKSIKLWN 388
L SGS D + LW+P +T H V V +SP Q + S S D +KLW+
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWD 371
Score = 39 (18.8 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 437 WSADSRLLLSGSKDSTL 453
W+ D+ LLLSG D+ L
Sbjct: 394 WT-DTGLLLSGGADNKL 409
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 233 (87.1 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 55/161 (34%), Positives = 85/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GHTEA+ SV +S D ++ S S D TVR+WD+ + TG+K + CI++S
Sbjct: 252 TLSGHTEAISSVLWS-DADEVCSASWDHTVRVWDVESGGLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTH----DQQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 MVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGAD 406
Score = 167 (63.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 54/176 (30%), Positives = 85/176 (48%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GH + + WS D + S S ++ WD ++G L+G+K +
Sbjct: 246 TRTPLVTLSGHTEAISSVLWS-DADEVCSASWDHTVRVWDVESGGLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT VKW D
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ +GS D +K+W+T K + +L H V S+ + L +G D+ K YS
Sbjct: 358 LISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN--KLYS 411
Score = 138 (53.6 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHDQQLISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
Score = 135 (52.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 62/275 (22%), Positives = 121/275 (44%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ I + + ++SGS + W + GK S + GH + ++W V
Sbjct: 96 QCMFHDDWISSIKGAEEW--ILSGSYDKTSRIWSLE-GK-SIMTIVGHTDVVKDVAW--V 149
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGVIY-TGSQ 259
++ ++AS D +W+ ++ K + C GH +V + G + +GS
Sbjct: 150 KKDSLSCLLLTASMDQTILLWEWNIERNKVKALHCCRGHAGSVDAIAVDSSGTKFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAAL 318
D +K+W T E++ + + + L RT +G
Sbjct: 210 DKMLKIWSTVPTDEEDEIQEPTNRPRKKQKTEQLGLTRTPLVTLSGHT------------ 257
Query: 319 ERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
E + + + + + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS
Sbjct: 258 EAISSVLWSDADEVCSASWDHTVRVWD-VESGGLKSTLTGNK-VFNCISYSPLCKRLASG 315
Query: 379 SFDKSIKLWNGTT--GKFVAV-FRGHVGPVYQIRF 410
S D+ I+LW+ T G V++ H G V +++
Sbjct: 316 STDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Score = 115 (45.5 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 52/210 (24%), Positives = 90/210 (42%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLNNEEKL----PYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P + LS I+NKLL + +L + F I L +PL ++E +S E+V
Sbjct: 21 PFSIPATSEVADLSNIINKLLETKNELHKHVEFDFLIKGQFLRMPLVKHMELEDISSEEV 80
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ + Y + + +C H + + S+ + + + SGS D T R+W L ++
Sbjct: 81 VELEYVEK--YTAPQPEQCMF----HDDWISSIKGAEEW--ILSGSYDKTSRIWSLEGKS 132
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKW 195
M GH + V +AW D L++ S + W+ + L GH
Sbjct: 133 IM-TIVGHTDVVKDVAWVKKDSLSCLLLTASMDQTILLWEWNIERNKVKALHCCRGH--- 188
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
G S + + +++ +F S S D +IW
Sbjct: 189 -AG-SVDAIAVDSSGTKFCSGSWDKMLKIW 216
Score = 105 (42.0 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 39/163 (23%), Positives = 75/163 (46%)
Query: 230 RKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
R ++ LSGHT A++ V W + + S D T++VW+ G L L G+ + N ++
Sbjct: 247 RTPLVTLSGHTEAISSVLWSDADEVCSASWDHTVRVWDVESGGLKSTLTGNKVF-NCISY 305
Query: 290 STEYA-LRTGAFDHTGKQY---SSPEEMKKAALERYN----KIKGNAP--ERLVSGSDDF 339
S L +G+ D + + + + +L + +K + ++L+SGS D
Sbjct: 306 SPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSLDN 365
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ LW+ K P + H+ V V ++ G ++ + +K
Sbjct: 366 MVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNK 408
Score = 101 (40.6 bits), Expect = 8.9e-10, Sum P(3) = 8.9e-10
Identities = 35/120 (29%), Positives = 55/120 (45%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG---NAP--ER 331
L GH ++S+ S + + ++DHT + + K+ L NK+ +P +R
Sbjct: 253 LSGHTEAISSVLWSDADEVCSASWDHTVRVWDVESGGLKSTLTG-NKVFNCISYSPLCKR 311
Query: 332 LVSGSDDFTMFLWEPAVSKQP--KTRMTGHQQLVNHVYFSPD-GQWVASASFDKSIKLWN 388
L SGS D + LW+P +T H V V +SP Q + S S D +KLW+
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSLDNMVKLWD 371
Score = 39 (18.8 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 437 WSADSRLLLSGSKDSTL 453
W+ D+ LLLSG D+ L
Sbjct: 394 WT-DTGLLLSGGADNKL 409
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 230 (86.0 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 52/161 (32%), Positives = 85/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GH EA+ SV +S D ++ S S D T+++WD+ + + TG+K + CI++S
Sbjct: 252 TLSGHKEAISSVLWS-DAEEICSASWDHTIKVWDVESGSLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHE----QQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 MVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDSGLLLSGGAD 406
Score = 175 (66.7 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 54/176 (30%), Positives = 87/176 (49%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GHK + + WS D + + S S ++ WD ++G L+G+K +
Sbjct: 246 TRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIKVWDVESGSLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT VKW +
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ +GS D +K+W+T K + +L H V S+ + L +G D+ K YS
Sbjct: 358 LISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDSGLLLSGGADN--KLYS 411
Score = 144 (55.7 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 58/245 (23%), Positives = 111/245 (45%)
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+S + EL+ + T P H WI+ I + ++ S D +RIW
Sbjct: 75 ISSEEVVELEYVEKYTA-PQPEQCMFHDDWISAIEGTEEWI-------LTGSYDKTSRIW 126
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGV---IYTGSQDCTIKVWE-TTQGKLIREL--- 277
+ K ++ + GHT V V W D + + + S D TI +WE + ++ L
Sbjct: 127 SLE-GKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCC 185
Query: 278 KGHGHWVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGS 336
+GH V+S+A+ ST +G++D K +S+ ++ +E N P +
Sbjct: 186 RGHAGSVDSIAVDSTGTKFCSGSWDKMLKIWSTVPTDEEDEMEEST----NRPRKKQKTE 241
Query: 337 DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA 396
+ +++ P ++GH++ ++ V +S D + + SAS+D +IK+W+ +G +
Sbjct: 242 --------QLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIKVWDVESGSLKS 292
Query: 397 VFRGH 401
G+
Sbjct: 293 TLTGN 297
Score = 143 (55.4 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 63/274 (22%), Positives = 120/274 (43%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ I + + +++GS + W + GK S + GH + ++W V
Sbjct: 96 QCMFHDDWISAIEGTEEW--ILTGSYDKTSRIWSLE-GK-SIMTIVGHTDVVKDVAW--V 149
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGVIY-TGSQ 259
++ +SAS D +W+ ++ K + C GH +V + G + +GS
Sbjct: 150 KKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTKFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALE 319
D +K+W T E++ ST + + G +P E
Sbjct: 210 DKMLKIWSTVPTDEEDEMEE----------STNRPRKKQKTEQLGLT-RTPIVTLSGHKE 258
Query: 320 RYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ + + E + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS S
Sbjct: 259 AISSVLWSDAEEICSASWDHTIKVWD-VESGSLKSTLTGNK-VFNCISYSPLCKRLASGS 316
Query: 380 FDKSIKLWNGTT--GKFVAV-FRGHVGPVYQIRF 410
D+ I+LW+ T G V++ H G V +++
Sbjct: 317 TDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Score = 137 (53.3 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHEQQLISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
Score = 108 (43.1 bits), Expect = 5.3e-10, Sum P(3) = 5.3e-10
Identities = 41/163 (25%), Positives = 74/163 (45%)
Query: 230 RKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
R ++ LSGH A++ V W I + S D TIKVW+ G L L G+ + N ++
Sbjct: 247 RTPIVTLSGHKEAISSVLWSDAEEICSASWDHTIKVWDVESGSLKSTLTGNKVF-NCISY 305
Query: 290 STEYA-LRTGAFDHTGKQY---SSPEEMKKAALERYN----KIKGNAP--ERLVSGSDDF 339
S L +G+ D + + + + +L + +K + ++L+SGS D
Sbjct: 306 SPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDN 365
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ LW+ K P + H+ V V ++ G ++ + +K
Sbjct: 366 MVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDSGLLLSGGADNK 408
Score = 108 (43.1 bits), Expect = 5.3e-10, Sum P(3) = 5.3e-10
Identities = 51/210 (24%), Positives = 91/210 (43%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLN--NE--EKLPYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P + LS ++NKLL NE + + + F I L +PL ++E +S E+V
Sbjct: 21 PFSIPAASEIADLSNLINKLLEAKNEFHKHVEFDFLIKGQFLRMPLFKHMELENISSEEV 80
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ + Y + + +C H + + ++ + + + +GS D T R+W L ++
Sbjct: 81 VELEYVEK--YTAPQPEQCMF----HDDWISAIEGTEEW--ILTGSYDKTSRIWSLEGKS 132
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKW 195
M GH + V +AW D L+S S + W+ + L GH
Sbjct: 133 IM-TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGH--- 188
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
G S + + +++ +F S S D +IW
Sbjct: 189 -AG-SVDSIAVDSTGTKFCSGSWDKMLKIW 216
Score = 106 (42.4 bits), Expect = 8.5e-10, Sum P(3) = 8.5e-10
Identities = 36/120 (30%), Positives = 55/120 (45%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG---NAP--ER 331
L GH ++S+ S + + ++DHT K + K+ L NK+ +P +R
Sbjct: 253 LSGHKEAISSVLWSDAEEICSASWDHTIKVWDVESGSLKSTLTG-NKVFNCISYSPLCKR 311
Query: 332 LVSGSDDFTMFLWEPAVSKQP--KTRMTGHQQLVNHVYFSPDG-QWVASASFDKSIKLWN 388
L SGS D + LW+P +T H V V +SP Q + S S D +KLW+
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVKLWD 371
Score = 42 (19.8 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 437 WSADSRLLLSGSKDSTL 453
W+ DS LLLSG D+ L
Sbjct: 394 WT-DSGLLLSGGADNKL 409
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 235 (87.8 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 73/283 (25%), Positives = 127/283 (44%)
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
D + SGS D TV +WD+N++ ++K GH VLC+ + LVSGS + WD
Sbjct: 230 DDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWD 289
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW--DVS--LRKCVI 234
Q +P GH + G+ ++ +S+S+D AR+W D + C+
Sbjct: 290 WQNRRPL-KVYFGHTDNVLGVVVSENYI-------ISSSRDHTARVWRLDATSPAEACMH 341
Query: 235 CLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY 293
L GH +V V++ G+I T S D T++ W+ T G IR + H + + ++
Sbjct: 342 VLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGKF 401
Query: 294 ALRTGAFDHTGKQYSSPE----EMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVS 349
+ +G+ D T + + + M + + ++ N E++VSG D T+ +W
Sbjct: 402 IV-SGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFN-DEKIVSGGYDGTVRIWNFNTG 459
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
+Q V + F D + + + + I +WN G
Sbjct: 460 EQHCVLHNSRNSRVFGLQF--DHRRIIACTHSSEILVWNFDDG 500
Score = 229 (85.7 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 54/201 (26%), Positives = 101/201 (50%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH+ +VL + F L SGS D+T+ +WD + P+ GH + VL + S + ++
Sbjct: 259 GHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSEN--YI 316
Query: 166 VSGSKAGELQCWDPQTGKPSG---NPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+S S+ + W P+ + L GH + + + ++ V+AS D
Sbjct: 317 ISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQY-----SSKTGLIVTASSDRTL 371
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
R WD++ C+ + H + C ++ G ++ +GS D TI+++E + GKL+R L+GH
Sbjct: 372 RTWDITTGHCIRIIHAHQRGIACAQYNGKFIV-SGSSDLTIRIFEASSGKLLRMLQGHED 430
Query: 283 WVNSLALSTEYALRTGAFDHT 303
+ ++ + E + +G +D T
Sbjct: 431 LIRTVRFNDEKIV-SGGYDGT 450
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 52/207 (25%), Positives = 103/207 (49%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGK 272
VS SKD +WDV+ R + L GH+ +V C+ + ++ +GS D TI +W+ +
Sbjct: 235 VSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRR 294
Query: 273 LIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY----SSPEE----MKKAALERYNKI 324
++ GH V + +S Y + + DHT + + +SP E + + L N +
Sbjct: 295 PLKVYFGHTDNVLGVVVSENYIISSSR-DHTARVWRLDATSPAEACMHVLRGHLASVNSV 353
Query: 325 KGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ ++ L V+ S D T+ W+ + + HQ+ + ++ G+++ S S D +
Sbjct: 354 QYSSKTGLIVTASSDRTLRTWDITTGHCIRI-IHAHQRGIACAQYN--GKFIVSGSSDLT 410
Query: 384 IKLWNGTTGKFVAVFRGHVGPVYQIRF 410
I+++ ++GK + + +GH + +RF
Sbjct: 411 IRIFEASSGKLLRMLQGHEDLIRTVRF 437
Score = 160 (61.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 67/252 (26%), Positives = 114/252 (45%)
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
V C+ + D + +VSGSK + WD + + L GH + + + CRR
Sbjct: 224 VYCVQY--DDEIMVSGSKDRTVSVWDVNS-RFILYKLYGHSGSVLCLDF--------CRR 272
Query: 213 ---FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWE-- 267
VS S D IWD R+ + GHT V V + I + S+D T +VW
Sbjct: 273 RNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVS-ENYIISSSRDHTARVWRLD 331
Query: 268 -TTQGKL-IRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERYNKI 324
T+ + + L+GH VNS+ S++ L T + D T + + + + +
Sbjct: 332 ATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRG 391
Query: 325 KGNAPER---LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
A +VSGS D T+ ++E + K + + GH+ L+ V F+ + + S +D
Sbjct: 392 IACAQYNGKFIVSGSSDLTIRIFEASSGKLLRM-LQGHEDLIRTVRFNDEK--IVSGGYD 448
Query: 382 KSIKLWNGTTGK 393
++++WN TG+
Sbjct: 449 GTVRIWNFNTGE 460
Score = 137 (53.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 40/141 (28%), Positives = 64/141 (45%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
P C + GH +V SV +S + + S D T+R WD+ T + H+ + C
Sbjct: 335 PAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIAC 394
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
++ GK +VSGS ++ ++ +GK L GH+ I V N + VS
Sbjct: 395 AQYN--GKFIVSGSSDLTIRIFEASSGKLL-RMLQGHEDLI-----RTVRFND--EKIVS 444
Query: 216 ASKDGDARIWDVSL--RKCVI 234
DG RIW+ + + CV+
Sbjct: 445 GGYDGTVRIWNFNTGEQHCVL 465
Score = 127 (49.8 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 54/219 (24%), Positives = 94/219 (42%)
Query: 242 AVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAF 300
+V CV++ D ++ +GS+D T+ VW+ ++ +L GH V L L +G+
Sbjct: 223 SVYCVQYD-DEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSS 281
Query: 301 DHTGKQYSSPEEMK-KAALERYNKIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRM- 356
D T + K + + G ++S S D T +W + + M
Sbjct: 282 DSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSENYIISSSRDHTARVWRLDATSPAEACMH 341
Query: 357 --TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIY 414
GH VN V +S + +AS D++++ W+ TTG + + H I
Sbjct: 342 VLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRG--------IA 393
Query: 415 CFRYPSNFYCVVDMSCCMSLYSWSADS-RLL--LSGSKD 450
C +Y F +V S +++ + A S +LL L G +D
Sbjct: 394 CAQYNGKF--IVSGSSDLTIRIFEASSGKLLRMLQGHED 430
>UNIPROTKB|F1P1L6 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009986 "cell surface" evidence=IEA] [GO:0014909
"smooth muscle cell migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000102167 GO:GO:0014909 EMBL:AADN02016792
IPI:IPI00586339 Ensembl:ENSGALT00000018663 ArrayExpress:F1P1L6
Uniprot:F1P1L6
Length = 408
Score = 232 (86.7 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 80/326 (24%), Positives = 145/326 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T + H+ +V V+ P LA +G D +W L+ +F+C+GHK+ V C +S D
Sbjct: 60 TFSLHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECSGHKDSVTCAGFSHD 119
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP-VHLNAPCRRFVSASKDG 220
+ +G +G ++ W T + + + G +W+ W P H+ ++ + DG
Sbjct: 120 SVFVATGDMSGLIKVWRVDTKEEAWSFEVGDLEWM---EWHPQAHV------LLAGTADG 170
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKG 279
++ +W + C G TC K DG G +D T+++W+ QG + LKG
Sbjct: 171 NSWMWKIPSGDCKT-FQGPACPATCGKILPDGKRAVVGYEDGTMRIWDLKQGTSLHVLKG 229
Query: 280 H-GHW--VNSLALSTEYAL-RTGAFD-H-------TGKQ---YSSPEEMKKAALERYNKI 324
GH + +A + + +L TG+ D H TGK + KA +
Sbjct: 230 QDGHQDPLTCVASNQDGSLILTGSVDCHAKLVNSATGKVVCVFKMESAAPKAPASEGEEA 289
Query: 325 KGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ N+ E L G D T+ +++ +S Q H+ + + + + V
Sbjct: 290 ESNSVESLGFCNVMPLAAVGYLDGTLAIYD--LSTQSLRHKCQHESGIVQLLWEENSAVV 347
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGH 401
+ S D +++LW+ +GK ++ +RGH
Sbjct: 348 YTCSLDGAVRLWDARSGKMISEYRGH 373
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 56/209 (26%), Positives = 93/209 (44%)
Query: 118 PDGRQLASGSGDTTVRLWDLNTQTPMFKCTG---HKNWVLCIAWSADGKHLVSGSKAGEL 174
PDG++ G D T+R+WDL T + G H++ + C+A + DG +++GS
Sbjct: 199 PDGKRAVVGYEDGTMRIWDLKQGTSLHVLKGQDGHQDPLTCVASNQDGSLILTGSVDCHA 258
Query: 175 QCWDPQTGK-------PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK---DGDARI 224
+ + TGK S P + + S V C A+ DG I
Sbjct: 259 KLVNSATGKVVCVFKMESAAPKAPASEGEEAES-NSVESLGFCNVMPLAAVGYLDGTLAI 317
Query: 225 WDVS---LR-KCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKG 279
+D+S LR KC H + + W V+YT S D +++W+ GK+I E +G
Sbjct: 318 YDLSTQSLRHKCQ-----HESGIVQLLWEENSAVVYTCSLDGAVRLWDARSGKMISEYRG 372
Query: 280 HGHWVNSLALSTEYALR-TGAFDHTGKQY 307
H + A++ + ++ T + DH K +
Sbjct: 373 HSAEILDFAVNKDASIVVTTSGDHQAKVF 401
>UNIPROTKB|F1ND84 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009986 "cell surface" evidence=IEA] [GO:0014909
"smooth muscle cell migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000102167 OMA:VWSFEVG GO:GO:0014909
EMBL:AADN02016792 IPI:IPI00821947 Ensembl:ENSGALT00000038174
ArrayExpress:F1ND84 Uniprot:F1ND84
Length = 411
Score = 232 (86.7 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 80/326 (24%), Positives = 145/326 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T + H+ +V V+ P LA +G D +W L+ +F+C+GHK+ V C +S D
Sbjct: 63 TFSLHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECSGHKDSVTCAGFSHD 122
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP-VHLNAPCRRFVSASKDG 220
+ +G +G ++ W T + + + G +W+ W P H+ ++ + DG
Sbjct: 123 SVFVATGDMSGLIKVWRVDTKEEAWSFEVGDLEWM---EWHPQAHV------LLAGTADG 173
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKG 279
++ +W + C G TC K DG G +D T+++W+ QG + LKG
Sbjct: 174 NSWMWKIPSGDCKT-FQGPACPATCGKILPDGKRAVVGYEDGTMRIWDLKQGTSLHVLKG 232
Query: 280 H-GHW--VNSLALSTEYAL-RTGAFD-H-------TGKQ---YSSPEEMKKAALERYNKI 324
GH + +A + + +L TG+ D H TGK + KA +
Sbjct: 233 QDGHQDPLTCVASNQDGSLILTGSVDCHAKLVNSATGKVVCVFKMESAAPKAPASEGEEA 292
Query: 325 KGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ N+ E L G D T+ +++ +S Q H+ + + + + V
Sbjct: 293 ESNSVESLGFCNVMPLAAVGYLDGTLAIYD--LSTQSLRHKCQHESGIVQLLWEENSAVV 350
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGH 401
+ S D +++LW+ +GK ++ +RGH
Sbjct: 351 YTCSLDGAVRLWDARSGKMISEYRGH 376
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 56/209 (26%), Positives = 93/209 (44%)
Query: 118 PDGRQLASGSGDTTVRLWDLNTQTPMFKCTG---HKNWVLCIAWSADGKHLVSGSKAGEL 174
PDG++ G D T+R+WDL T + G H++ + C+A + DG +++GS
Sbjct: 202 PDGKRAVVGYEDGTMRIWDLKQGTSLHVLKGQDGHQDPLTCVASNQDGSLILTGSVDCHA 261
Query: 175 QCWDPQTGK-------PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK---DGDARI 224
+ + TGK S P + + S V C A+ DG I
Sbjct: 262 KLVNSATGKVVCVFKMESAAPKAPASEGEEAES-NSVESLGFCNVMPLAAVGYLDGTLAI 320
Query: 225 WDVS---LR-KCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKG 279
+D+S LR KC H + + W V+YT S D +++W+ GK+I E +G
Sbjct: 321 YDLSTQSLRHKCQ-----HESGIVQLLWEENSAVVYTCSLDGAVRLWDARSGKMISEYRG 375
Query: 280 HGHWVNSLALSTEYALR-TGAFDHTGKQY 307
H + A++ + ++ T + DH K +
Sbjct: 376 HSAEILDFAVNKDASIVVTTSGDHQAKVF 404
>UNIPROTKB|Q7YR70 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9615 "Canis lupus familiaris" [GO:0014909 "smooth muscle
cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 CTD:14
GeneTree:ENSGT00690000102167 HOGENOM:HOG000261676
HOVERGEN:HBG061307 OMA:VWSFEVG OrthoDB:EOG4D26PX GO:GO:0001525
GO:GO:0010595 GO:GO:0014909 EMBL:AY197355 RefSeq:NP_001013872.1
UniGene:Cfa.8616 ProteinModelPortal:Q7YR70 STRING:Q7YR70
Ensembl:ENSCAFT00000023220 GeneID:478908 KEGG:cfa:478908
InParanoid:Q7YR70 NextBio:20854176 Uniprot:Q7YR70
Length = 435
Score = 232 (86.7 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 89/349 (25%), Positives = 149/349 (42%)
Query: 85 VYQPQ--AVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQT 141
V +PQ V + + T A H+ +V V+ P LA +G D +W L+
Sbjct: 67 VLEPQEGVVGSMEGPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGE 126
Query: 142 PMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
+F+C GHK+ V C +S D + +G +G L+ W T + + +G +W+ W
Sbjct: 127 LLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEWM---EW 183
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
P AP ++ + DG+ +W V C G TC + DG G +D
Sbjct: 184 HP---RAPV--LLAGTADGNTWMWKVPNGDCKT-FQGPNCPATCGRVLPDGKRAVVGYED 237
Query: 261 CTIKVWETTQGKLIRELKG-HGHW--VNSLALSTEYAL-RTGAFD--------HTGKQYS 308
TI++W+ QG I LKG GH + +A + + +L TG+ D TGK
Sbjct: 238 GTIRIWDLKQGSPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAQLVSATTGKVVG 297
Query: 309 --SPEEM-KKAALERYNKIKGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRM 356
PE + + + + + N+ E L G D T+ +++ +S Q
Sbjct: 298 VFRPETVASQPNVGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIYD--LSTQTLRHQ 355
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
HQ + + + V + S D ++LW+ TG+ + +RGH +
Sbjct: 356 CQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEI 404
Score = 176 (67.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 57/204 (27%), Positives = 94/204 (46%)
Query: 118 PDGRQLASGSGDTTVRLWDLNTQTPM--FKCT-GHKNWVLCIAWSADGKHLVSGSKAGEL 174
PDG++ G D T+R+WDL +P+ K T GH+ + C+A + DG +++GS +
Sbjct: 226 PDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQA 285
Query: 175 QCWDPQTGKPSG--NPLSGHKKWITGISWEPVHLNAPCRRFVSASK-------DGDARIW 225
Q TGK G P + + G E + F S DG I+
Sbjct: 286 QLVSATTGKVVGVFRPETVASQPNVGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIY 345
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
D+S + + H + + W G V+YT S D +++W+ G+L+ + +GH +
Sbjct: 346 DLSTQT-LRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEI 404
Query: 285 NSLALSTEYALR-TGAFDHTGKQY 307
ALS + +L T + DH K +
Sbjct: 405 LDFALSKDASLVVTTSGDHKAKVF 428
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 234 (87.4 bits), Expect = 9.9e-17, P = 9.9e-17
Identities = 81/315 (25%), Positives = 141/315 (44%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
+R +N + I G + FSP+ + LA+ +LW + + + GH V
Sbjct: 217 LRSLNNFCSQI-GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNV 275
Query: 154 LCIAW------SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
I + S D K +L S + G ++ W + +P + + GH + + W H
Sbjct: 276 GAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD-IEGHTVRVARVMW---H 331
Query: 206 LNAPCRRFVSAS-KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
P RF+ + D R+WD+ ++ ++ GH++ V + + DG + TG D
Sbjct: 332 ---PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFG 388
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQ---------YSSPEEM 313
+VW+ G+ I L+GH + + S Y + TG+ D+T K Y+ P
Sbjct: 389 RVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 448
Query: 314 KKAALERYNKIKGNAPERLVSGSDDFTMFLW-EPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
++ I G+ L++G+ D T +W P S P + GH+ V + S DG
Sbjct: 449 NLVTGVKFEPIHGDF---LLTGAYDNTAKIWTHPGWS--PLKTLAGHEGKVMGLDISSDG 503
Query: 373 QWVASASFDKSIKLW 387
Q +A+ S+D++ KLW
Sbjct: 504 QLIATCSYDRTFKLW 518
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 66/260 (25%), Positives = 110/260 (42%)
Query: 158 WSADGKHLVSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEP---VHLNAPCRRF 213
+S + K L + +G + W P + L GH + I + P V L+
Sbjct: 238 FSPNSKMLATACWSGLCKLWSVPDCSLL--HTLRGHNTNVGAIVFHPKSTVSLDQKDVNL 295
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
S + DG ++W + + V + GHT+ V V W G + T D + ++W+ +
Sbjct: 296 ASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQE 355
Query: 273 LIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERYNK-IKG-N-A 328
I +GH V +A + +L TG D G+ + LE + K I G N +
Sbjct: 356 EILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFS 415
Query: 329 PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP-DGQWVASASFDKSIK 385
P + +GS D T +W+ + T + HQ LV V F P G ++ + ++D + K
Sbjct: 416 PNGYHIATGSGDNTCKVWDLRQRRCVYT-IPAHQNLVTGVKFEPIHGDFLLTGAYDNTAK 474
Query: 386 LWNGTTGKFVAVFRGHVGPV 405
+W + GH G V
Sbjct: 475 IWTHPGWSPLKTLAGHEGKV 494
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R RC + GH + + + FSP+G +A+GSGD T ++WDL + ++ H+
Sbjct: 390 VWDLR-TGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 448
Query: 151 NWVLCIAWSA-DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP 209
N V + + G L++G+ + W P L+GH+ + G+ +++
Sbjct: 449 NLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPL-KTLAGHEGKVMGLD-----ISSD 502
Query: 210 CRRFVSASKDGDARIW 225
+ + S D ++W
Sbjct: 503 GQLIATCSYDRTFKLW 518
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 231 (86.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 53/161 (32%), Positives = 85/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GH EA+ SV +S D ++ S S D T+R+WD+ + + TG+K + CI++S
Sbjct: 252 TLSGHKEAISSVLWS-DAEEICSASWDHTIRVWDVESGSLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHE----QQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGAD 406
Score = 171 (65.3 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 53/176 (30%), Positives = 87/176 (49%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GHK + + WS D + + S S ++ WD ++G L+G+K +
Sbjct: 246 TRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIRVWDVESGSLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT +KW +
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ +GS D +K+W+T K + +L H V S+ + L +G D+ K YS
Sbjct: 358 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN--KLYS 411
Score = 139 (54.0 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 57/245 (23%), Positives = 111/245 (45%)
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+S + EL+ + T P H WI+ + + ++ S D +RIW
Sbjct: 75 ISSEEVVELEYVEKYTA-PQPEQCLFHDDWISSVRGAEEWI-------LTGSYDKTSRIW 126
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGV---IYTGSQDCTIKVWE-TTQGKLIREL--- 277
+ K ++ + GHT V V W D + + + S D TI +WE + ++ L
Sbjct: 127 SLE-GKSIMTIVGHTDVVKDVAWVKKDNLSCLLLSSSMDQTILLWEWNVERNKVKALHCC 185
Query: 278 KGHGHWVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGS 336
+GH V+S+A+ ST +G++D K +S+ ++ LE N P +
Sbjct: 186 RGHAGSVDSIAVDSTGTKFCSGSWDKMLKIWSAVPTDEEDELEEPT----NRPRKKQKTE 241
Query: 337 DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA 396
+ +++ P ++GH++ ++ V +S D + + SAS+D +I++W+ +G +
Sbjct: 242 --------QLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIRVWDVESGSLKS 292
Query: 397 VFRGH 401
G+
Sbjct: 293 TLTGN 297
Score = 136 (52.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 62/275 (22%), Positives = 120/275 (43%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ + + + +++GS + W + GK S + GH + ++W
Sbjct: 96 QCLFHDDWISSVRGAEEW--ILTGSYDKTSRIWSLE-GK-SIMTIVGHTDVVKDVAWVKK 151
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGVIY-TGSQ 259
N C +S+S D +W+ ++ K + C GH +V + G + +GS
Sbjct: 152 D-NLSCL-LLSSSMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTKFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAAL 318
D +K+W EL+ + + + L RT +G +
Sbjct: 210 DKMLKIWSAVPTDEEDELEEPTNRPRKKQKTEQLGLTRTPIVTLSGHK------------ 257
Query: 319 ERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
E + + + E + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS
Sbjct: 258 EAISSVLWSDAEEICSASWDHTIRVWD-VESGSLKSTLTGNK-VFNCISYSPLCKRLASG 315
Query: 379 SFDKSIKLWNGTT--GKFVAV-FRGHVGPVYQIRF 410
S D+ I+LW+ T G V++ H G V +++
Sbjct: 316 STDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKW 350
Score = 135 (52.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
Score = 112 (44.5 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 54/210 (25%), Positives = 91/210 (43%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLN--NE--EKLPYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P + LS I+NKLL NE + + + F I L +PL ++E +S E+V
Sbjct: 21 PFSIPAASEIADLSNIINKLLEAKNEFHKHVEFDFLIKGQFLRLPLLKHMELENISSEEV 80
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ + Y + + +C H + + SV + + + +GS D T R+W L ++
Sbjct: 81 VELEYVEK--YTAPQPEQCLF----HDDWISSVRGAEEW--ILTGSYDKTSRIWSLEGKS 132
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKW 195
M GH + V +AW D L+S S + W+ + L GH
Sbjct: 133 IM-TIVGHTDVVKDVAWVKKDNLSCLLLSSSMDQTILLWEWNVERNKVKALHCCRGH--- 188
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
G S + + +++ +F S S D +IW
Sbjct: 189 -AG-SVDSIAVDSTGTKFCSGSWDKMLKIW 216
Score = 103 (41.3 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 40/163 (24%), Positives = 74/163 (45%)
Query: 230 RKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
R ++ LSGH A++ V W I + S D TI+VW+ G L L G+ + N ++
Sbjct: 247 RTPIVTLSGHKEAISSVLWSDAEEICSASWDHTIRVWDVESGSLKSTLTGNKVF-NCISY 305
Query: 290 STEYA-LRTGAFDHTGKQY---SSPEEMKKAALERYN----KIKGNAP--ERLVSGSDDF 339
S L +G+ D + + + + +L + +K + ++L+SGS D
Sbjct: 306 SPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSLDN 365
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ LW+ K P + H+ V V ++ G ++ + +K
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNK 408
Score = 99 (39.9 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 34/120 (28%), Positives = 55/120 (45%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG---NAP--ER 331
L GH ++S+ S + + ++DHT + + K+ L NK+ +P +R
Sbjct: 253 LSGHKEAISSVLWSDAEEICSASWDHTIRVWDVESGSLKSTLTG-NKVFNCISYSPLCKR 311
Query: 332 LVSGSDDFTMFLWEPAVSKQP--KTRMTGHQQLVNHVYFSPDG-QWVASASFDKSIKLWN 388
L SGS D + LW+P +T H V + +SP Q + S S D +KLW+
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSLDNIVKLWD 371
Score = 39 (18.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 437 WSADSRLLLSGSKDSTL 453
W+ D+ LLLSG D+ L
Sbjct: 394 WT-DTGLLLSGGADNKL 409
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 235 (87.8 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 77/319 (24%), Positives = 138/319 (43%)
Query: 99 RCSAT-IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKN--WVLC 155
RC+ I+ V S+ +P + + + + + ++D N + GH W +
Sbjct: 243 RCTQRHISPDQGVVTSLHLTP--KYIVASLDNAKIHVYDTNGENQK-TLEGHVMGVWAM- 298
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ W LVSG E++ W+ TG+ S L GH + + + +S
Sbjct: 299 VPWD---NILVSGGCDREVRVWNMATGE-SIYLLRGHTSTVRCLKMSDKNTA------IS 348
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
S+D RIWD+ C L GH +V C+ GD ++ +GS D T +VW ++G+ +R
Sbjct: 349 GSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAVHGD-IVVSGSYDTTARVWSISEGRFLR 407
Query: 276 ELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN---APERL 332
L GH + ++A + TG+ D + + + A L+ + + G + + L
Sbjct: 408 ALSGHFSQIYAIAFDGR-RIATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQMSGDTL 466
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
V+G D ++ +W P R+ H V + F D + S D +K+W TG
Sbjct: 467 VTGGSDGSVRVWS-LTRMAPIHRLAAHDNSVTSLQF--DNNRIVSGGSDGRVKVWCLRTG 523
Query: 393 KFVAVFRGHVGPVYQIRFE 411
+ + V+++ FE
Sbjct: 524 QLLRELSTPSDTVWRVTFE 542
Score = 159 (61.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 61/236 (25%), Positives = 111/236 (47%)
Query: 236 LSGHTLAV-TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH + V V W D ++ +G D ++VW G+ I L+GH V L +S +
Sbjct: 288 LEGHVMGVWAMVPW--DNILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMSDKNT 345
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERYN-KIKGNAP--ERLVSGSDDFTMFLWEPAVSKQ 351
+G+ D T + + ++ L + ++ A + +VSGS D T +W ++S+
Sbjct: 346 AISGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAVHGDIVVSGSYDTTARVW--SISEG 403
Query: 352 PKTR-MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
R ++GH + + F DG+ +A+ S D S+++W+ TG+ A+ +GH V Q++
Sbjct: 404 RFLRALSGHFSQIYAIAF--DGRRIATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQM 461
Query: 411 E---LIYCFRYPS-NFYCVVDMSCCM-------SLYSWSADSRLLLSGSKDSTLKV 455
L+ S + + M+ S+ S D+ ++SG D +KV
Sbjct: 462 SGDTLVTGGSDGSVRVWSLTRMAPIHRLAAHDNSVTSLQFDNNRIVSGGSDGRVKV 517
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 237 (88.5 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 58/202 (28%), Positives = 95/202 (47%)
Query: 107 HTEAVLSVAFS-PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
H+ AV + R L +G D V LW + + GH + + + + A +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 74
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+G+ +G ++ WD + K L+GH+ +++ P F S S D + +IW
Sbjct: 75 AAGAASGTIKLWDLEEAKVV-RTLTGHRSNCVSVNFHPFG-----EFFASGSLDTNLKIW 128
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
D+ + C+ GHT V +++ DG I +G +D +KVW+ T GKL+ E K H +
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKI 188
Query: 285 NSLALST-EYALRTGAFDHTGK 305
SL E+ L TG+ D T K
Sbjct: 189 QSLDFHPHEFLLATGSADKTVK 210
Score = 196 (74.1 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 62/224 (27%), Positives = 102/224 (45%)
Query: 239 HTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL-STEYAL 295
H+ AV C+K G V+ TG +D + +W + I L GH ++S+ ++E +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 74
Query: 296 RTGAFDHTGKQYSSPEEMKKAAL--ERYNKIKGNA-P--ERLVSGSDDFTMFLWEPAVSK 350
GA T K + E L R N + N P E SGS D + +W+ + K
Sbjct: 75 AAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWD--IRK 132
Query: 351 QPKTRM-TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ GH + VN + F+PDG+W+ S D +K+W+ T GK + F+ H G + +
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLD 192
Query: 410 FELIYCFRYPSNFYCVVDMSCCMSLYSWSADS-RLLLSGSKDST 452
F +P F S ++ W ++ L+ SG ++T
Sbjct: 193 F-------HPHEFLLATG-SADKTVKFWDLETFELIGSGGTETT 228
Score = 170 (64.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 45/168 (26%), Positives = 77/168 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH +SV F P G ASGS DT +++WD+ + + GH V + ++ DG
Sbjct: 96 TLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG 155
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +VSG + ++ WD GK + H+ I + + P + S D
Sbjct: 156 RWIVSGGEDNVVKVWDLTAGKLL-HEFKSHEGKIQSLDFHPHEF-----LLATGSADKTV 209
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
+ WD+ + + T V C+ + DG + G Q+ ++K+ WE
Sbjct: 210 KFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQE-SLKIFSWE 256
Score = 162 (62.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 43/173 (24%), Positives = 81/173 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH+ + SV F +A+G+ T++LWDL + TGH++ + + + G
Sbjct: 54 SLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFG 113
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ SGS L+ WD + K + GH + + + + P R VS +D
Sbjct: 114 EFFASGSLDTNLKIWDIRK-KGCIHTYKGHTRGVNVLRFTP-----DGRWIVSGGEDNVV 167
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQGKLI 274
++WD++ K + H + + + + ++ TGS D T+K W+ +LI
Sbjct: 168 KVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELI 220
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 233 (87.1 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 77/312 (24%), Positives = 140/312 (44%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
+R VN + I G + FSP+ + L + S +LW + T + GH V
Sbjct: 203 LRNVNNFCSQI-GDDRPISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNV 261
Query: 154 LCIAWSADGK--------HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
I++ ++ S + G ++ W + +P + + GH + ++W H
Sbjct: 262 GAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEPIAD-IEGHSMRVARVTW---H 317
Query: 206 LNAPCRRFVSAS-KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
P RF+ + D R+WD+ +++ ++ GH+ V + + DG + TG D
Sbjct: 318 ---PSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFA 374
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYN 322
+VW+ G+ + L+GH + S+ S + + TG+ D+ K + + + +
Sbjct: 375 RVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQ 434
Query: 323 ------KIKGNAPERLVSGSDDFTMFLW-EPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
K + N L++G+ D T +W P S P + GH+ V V SPDGQ +
Sbjct: 435 NLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWS--PLKTLAGHEGKVMGVDLSPDGQLI 492
Query: 376 ASASFDKSIKLW 387
A+ S+D++ KLW
Sbjct: 493 ATCSYDRTFKLW 504
Score = 217 (81.4 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 64/211 (30%), Positives = 97/211 (45%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A I GH+ V V + P GR L + D + RLWDL Q + GH V + + D
Sbjct: 302 ADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPD 361
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
G +G + WD +TG+ L GH K I I++ P + + S D
Sbjct: 362 GSLAGTGGLDSFARVWDLRTGR-CVMFLEGHIKEIYSINFSPNGFHV-----ATGSGDNA 415
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWG-GDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WD+ R+C+ + H V+ VK+ DG + TG+ D T K+W ++ L G
Sbjct: 416 CKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAG 475
Query: 280 HGHWVNSLALSTEYAL-RTGAFDHTGKQYSS 309
H V + LS + L T ++D T K + S
Sbjct: 476 HEGKVMGVDLSPDGQLIATCSYDRTFKLWMS 506
Score = 164 (62.8 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 64/260 (24%), Positives = 110/260 (42%)
Query: 158 WSADGKHLVSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEP---VHLNAPCRRF 213
+S + K LV+ S +G + W P L GH + IS+ P + L
Sbjct: 224 FSPNSKLLVTASWSGLCKLWKVPDCTLI--RTLRGHNTNVGAISFHPQATLTLEESDVNM 281
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
S + DG ++W + + + + GH++ V V W G + T D + ++W+ +
Sbjct: 282 ASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQE 341
Query: 273 LIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERYNK-IKG-N-A 328
I +GH V+ L + +L TG D + + LE + K I N +
Sbjct: 342 EILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFS 401
Query: 329 PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP-DGQWVASASFDKSIK 385
P + +GS D +W+ + T + HQ LV+ V F P DG ++ + ++D + K
Sbjct: 402 PNGFHVATGSGDNACKVWDLRQRRCIYT-IPAHQNLVSSVKFQPNDGHYLLTGAYDNTAK 460
Query: 386 LWNGTTGKFVAVFRGHVGPV 405
+W + GH G V
Sbjct: 461 IWTHPGWSPLKTLAGHEGKV 480
Score = 157 (60.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 36/122 (29%), Positives = 62/122 (50%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R RC + GH + + S+ FSP+G +A+GSGD ++WDL + ++ H+
Sbjct: 376 VWDLR-TGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQ 434
Query: 151 NWVLCIAWSA-DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-HLNA 208
N V + + DG +L++G+ + W P L+GH+ + G+ P L A
Sbjct: 435 NLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPL-KTLAGHEGKVMGVDLSPDGQLIA 493
Query: 209 PC 210
C
Sbjct: 494 TC 495
Score = 129 (50.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 42/172 (24%), Positives = 78/172 (45%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLA------LSTEYA---LRTGAFDHT 303
++ T S K+W+ LIR L+GH V +++ L+ E + + + A D +
Sbjct: 230 LLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGS 289
Query: 304 GKQYSSPEEMKKAALE----RYNKIKGNAPERLVSGSD-DFTMFLWEPAVSKQPKTRMTG 358
K +S + A +E R ++ + R + + D + LW+ V ++ G
Sbjct: 290 VKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEI-LHQEG 348
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
H + V+ ++F PDG + D ++W+ TG+ V GH+ +Y I F
Sbjct: 349 HSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINF 400
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 226 (84.6 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 69/302 (22%), Positives = 131/302 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
R T+ GH + ++ + D R L S S D + +WD T + +WV+ A+
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPS---GNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ G + G + +T + + L GH +++ + L+ + ++
Sbjct: 106 APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF----LDD--NQIIT 159
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
+S D +WD+ + + +GH+ V + DG + +G+ D +IK+W+
Sbjct: 160 SSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCR 219
Query: 275 RELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG------- 326
+ GH +N++A YA TG+ D T + + + + N I G
Sbjct: 220 QTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS 279
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+ L++G DDF +W+ A+ + GH V+ + + DG VA+ S+D +K+
Sbjct: 280 RSGRLLLAGYDDFNCNIWD-AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
Query: 387 WN 388
WN
Sbjct: 339 WN 340
Score = 177 (67.4 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 69/269 (25%), Positives = 114/269 (42%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAY----- 105
Query: 207 NAPCRRFVSASK-DGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDC 261
AP FV+ D I+ + R+ + +S GHT ++C ++ D I T S D
Sbjct: 106 -APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT 164
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEM-KKAALE 319
T +W+ G+ GH V SL+L+ + +GA D + K + + M ++ +
Sbjct: 165 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 224
Query: 320 RYNKIKGNA--PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSPDG 372
+ I A P +GSDD T L++ ++ M H ++ V FS G
Sbjct: 225 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE--LLMYSHDNIICGITSVAFSRSG 282
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGH 401
+ + + D + +W+ G V GH
Sbjct: 283 RLLLAGYDDFNCNIWDAMKGDRAGVLAGH 311
Score = 136 (52.9 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 52/223 (23%), Positives = 88/223 (39%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-Y 293
L GH + + WG D ++ + SQD + +W++ + + WV + A +
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 294 ALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMFL 343
+ G D+ YS + R ++ G+ ++++ S D T L
Sbjct: 111 FVACGGLDNICSIYSLKTREGNVRVSR--ELPGHTGYLSCCRFLDDNQIITSSGDTTCAL 168
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W+ +Q GH V + +PDG+ S + D SIKLW+ F GH
Sbjct: 169 WDIETGQQT-VGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 227
Query: 404 PVYQIRF-ELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ + F Y F S+ D +C L+ AD LL+
Sbjct: 228 DINAVAFFPNGYAFTTGSD-----DATC--RLFDLRADQELLM 263
Score = 37 (18.1 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 430 CCMSLYSWSADSRLLLSGSKD 450
C ++ ++S RLLL+G D
Sbjct: 271 CGITSVAFSRSGRLLLAGYDD 291
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 226 (84.6 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 69/302 (22%), Positives = 131/302 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
R T+ GH + ++ + D R L S S D + +WD T + +WV+ A+
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPS---GNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ G + G + +T + + L GH +++ + L+ + ++
Sbjct: 106 APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF----LDD--NQIIT 159
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
+S D +WD+ + + +GH+ V + DG + +G+ D +IK+W+
Sbjct: 160 SSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCR 219
Query: 275 RELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG------- 326
+ GH +N++A YA TG+ D T + + + + N I G
Sbjct: 220 QTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS 279
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+ L++G DDF +W+ A+ + GH V+ + + DG VA+ S+D +K+
Sbjct: 280 RSGRLLLAGYDDFNCNIWD-AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
Query: 387 WN 388
WN
Sbjct: 339 WN 340
Score = 177 (67.4 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 69/269 (25%), Positives = 114/269 (42%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAY----- 105
Query: 207 NAPCRRFVSASK-DGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDC 261
AP FV+ D I+ + R+ + +S GHT ++C ++ D I T S D
Sbjct: 106 -APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT 164
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEM-KKAALE 319
T +W+ G+ GH V SL+L+ + +GA D + K + + M ++ +
Sbjct: 165 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 224
Query: 320 RYNKIKGNA--PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSPDG 372
+ I A P +GSDD T L++ ++ M H ++ V FS G
Sbjct: 225 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE--LLMYSHDNIICGITSVAFSRSG 282
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGH 401
+ + + D + +W+ G V GH
Sbjct: 283 RLLLAGYDDFNCNIWDAMKGDRAGVLAGH 311
Score = 136 (52.9 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 52/223 (23%), Positives = 88/223 (39%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-Y 293
L GH + + WG D ++ + SQD + +W++ + + WV + A +
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 294 ALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMFL 343
+ G D+ YS + R ++ G+ ++++ S D T L
Sbjct: 111 FVACGGLDNICSIYSLKTREGNVRVSR--ELPGHTGYLSCCRFLDDNQIITSSGDTTCAL 168
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W+ +Q GH V + +PDG+ S + D SIKLW+ F GH
Sbjct: 169 WDIETGQQT-VGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 227
Query: 404 PVYQIRF-ELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ + F Y F S+ D +C L+ AD LL+
Sbjct: 228 DINAVAFFPNGYAFTTGSD-----DATC--RLFDLRADQELLM 263
Score = 37 (18.1 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 430 CCMSLYSWSADSRLLLSGSKD 450
C ++ ++S RLLL+G D
Sbjct: 271 CGITSVAFSRSGRLLLAGYDD 291
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 226 (84.6 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 69/302 (22%), Positives = 131/302 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
R T+ GH + ++ + D R L S S D + +WD T + +WV+ A+
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPS---GNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ G + G + +T + + L GH +++ + L+ + ++
Sbjct: 106 APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF----LDD--NQIIT 159
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
+S D +WD+ + + +GH+ V + DG + +G+ D +IK+W+
Sbjct: 160 SSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCR 219
Query: 275 RELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG------- 326
+ GH +N++A YA TG+ D T + + + + N I G
Sbjct: 220 QTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS 279
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+ L++G DDF +W+ A+ + GH V+ + + DG VA+ S+D +K+
Sbjct: 280 RSGRLLLAGYDDFNCNIWD-AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
Query: 387 WN 388
WN
Sbjct: 339 WN 340
Score = 177 (67.4 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 69/269 (25%), Positives = 114/269 (42%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAY----- 105
Query: 207 NAPCRRFVSASK-DGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDC 261
AP FV+ D I+ + R+ + +S GHT ++C ++ D I T S D
Sbjct: 106 -APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT 164
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEM-KKAALE 319
T +W+ G+ GH V SL+L+ + +GA D + K + + M ++ +
Sbjct: 165 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 224
Query: 320 RYNKIKGNA--PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSPDG 372
+ I A P +GSDD T L++ ++ M H ++ V FS G
Sbjct: 225 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE--LLMYSHDNIICGITSVAFSRSG 282
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGH 401
+ + + D + +W+ G V GH
Sbjct: 283 RLLLAGYDDFNCNIWDAMKGDRAGVLAGH 311
Score = 136 (52.9 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 52/223 (23%), Positives = 88/223 (39%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-Y 293
L GH + + WG D ++ + SQD + +W++ + + WV + A +
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 294 ALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMFL 343
+ G D+ YS + R ++ G+ ++++ S D T L
Sbjct: 111 FVACGGLDNICSIYSLKTREGNVRVSR--ELPGHTGYLSCCRFLDDNQIITSSGDTTCAL 168
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W+ +Q GH V + +PDG+ S + D SIKLW+ F GH
Sbjct: 169 WDIETGQQT-VGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 227
Query: 404 PVYQIRF-ELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ + F Y F S+ D +C L+ AD LL+
Sbjct: 228 DINAVAFFPNGYAFTTGSD-----DATC--RLFDLRADQELLM 263
Score = 37 (18.1 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 430 CCMSLYSWSADSRLLLSGSKD 450
C ++ ++S RLLL+G D
Sbjct: 271 CGITSVAFSRSGRLLLAGYDD 291
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 226 (84.6 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 69/302 (22%), Positives = 131/302 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
R T+ GH + ++ + D R L S S D + +WD T + +WV+ A+
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPS---GNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ G + G + +T + + L GH +++ + L+ + ++
Sbjct: 106 APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF----LDD--NQIIT 159
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
+S D +WD+ + + +GH+ V + DG + +G+ D +IK+W+
Sbjct: 160 SSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCR 219
Query: 275 RELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG------- 326
+ GH +N++A YA TG+ D T + + + + N I G
Sbjct: 220 QTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS 279
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+ L++G DDF +W+ A+ + GH V+ + + DG VA+ S+D +K+
Sbjct: 280 RSGRLLLAGYDDFNCNIWD-AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
Query: 387 WN 388
WN
Sbjct: 339 WN 340
Score = 177 (67.4 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 69/269 (25%), Positives = 114/269 (42%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAY----- 105
Query: 207 NAPCRRFVSASK-DGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDC 261
AP FV+ D I+ + R+ + +S GHT ++C ++ D I T S D
Sbjct: 106 -APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT 164
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEM-KKAALE 319
T +W+ G+ GH V SL+L+ + +GA D + K + + M ++ +
Sbjct: 165 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 224
Query: 320 RYNKIKGNA--PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSPDG 372
+ I A P +GSDD T L++ ++ M H ++ V FS G
Sbjct: 225 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE--LLMYSHDNIICGITSVAFSRSG 282
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGH 401
+ + + D + +W+ G V GH
Sbjct: 283 RLLLAGYDDFNCNIWDAMKGDRAGVLAGH 311
Score = 136 (52.9 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 52/223 (23%), Positives = 88/223 (39%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-Y 293
L GH + + WG D ++ + SQD + +W++ + + WV + A +
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 294 ALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMFL 343
+ G D+ YS + R ++ G+ ++++ S D T L
Sbjct: 111 FVACGGLDNICSIYSLKTREGNVRVSR--ELPGHTGYLSCCRFLDDNQIITSSGDTTCAL 168
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W+ +Q GH V + +PDG+ S + D SIKLW+ F GH
Sbjct: 169 WDIETGQQT-VGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 227
Query: 404 PVYQIRF-ELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ + F Y F S+ D +C L+ AD LL+
Sbjct: 228 DINAVAFFPNGYAFTTGSD-----DATC--RLFDLRADQELLM 263
Score = 37 (18.1 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 430 CCMSLYSWSADSRLLLSGSKD 450
C ++ ++S RLLL+G D
Sbjct: 271 CGITSVAFSRSGRLLLAGYDD 291
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 226 (84.6 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 69/302 (22%), Positives = 131/302 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
R T+ GH + ++ + D R L S S D + +WD T + +WV+ A+
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPS---GNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ G + G + +T + + L GH +++ + L+ + ++
Sbjct: 106 APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF----LDD--NQIIT 159
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
+S D +WD+ + + +GH+ V + DG + +G+ D +IK+W+
Sbjct: 160 SSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCR 219
Query: 275 RELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG------- 326
+ GH +N++A YA TG+ D T + + + + N I G
Sbjct: 220 QTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS 279
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+ L++G DDF +W+ A+ + GH V+ + + DG VA+ S+D +K+
Sbjct: 280 RSGRLLLAGYDDFNCNIWD-AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
Query: 387 WN 388
WN
Sbjct: 339 WN 340
Score = 177 (67.4 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 69/269 (25%), Positives = 114/269 (42%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAY----- 105
Query: 207 NAPCRRFVSASK-DGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDC 261
AP FV+ D I+ + R+ + +S GHT ++C ++ D I T S D
Sbjct: 106 -APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT 164
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEM-KKAALE 319
T +W+ G+ GH V SL+L+ + +GA D + K + + M ++ +
Sbjct: 165 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 224
Query: 320 RYNKIKGNA--PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSPDG 372
+ I A P +GSDD T L++ ++ M H ++ V FS G
Sbjct: 225 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE--LLMYSHDNIICGITSVAFSRSG 282
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGH 401
+ + + D + +W+ G V GH
Sbjct: 283 RLLLAGYDDFNCNIWDAMKGDRAGVLAGH 311
Score = 136 (52.9 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 52/223 (23%), Positives = 88/223 (39%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-Y 293
L GH + + WG D ++ + SQD + +W++ + + WV + A +
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 294 ALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMFL 343
+ G D+ YS + R ++ G+ ++++ S D T L
Sbjct: 111 FVACGGLDNICSIYSLKTREGNVRVSR--ELPGHTGYLSCCRFLDDNQIITSSGDTTCAL 168
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W+ +Q GH V + +PDG+ S + D SIKLW+ F GH
Sbjct: 169 WDIETGQQT-VGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 227
Query: 404 PVYQIRF-ELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ + F Y F S+ D +C L+ AD LL+
Sbjct: 228 DINAVAFFPNGYAFTTGSD-----DATC--RLFDLRADQELLM 263
Score = 37 (18.1 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 430 CCMSLYSWSADSRLLLSGSKD 450
C ++ ++S RLLL+G D
Sbjct: 271 CGITSVAFSRSGRLLLAGYDD 291
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 225 (84.3 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 75/330 (22%), Positives = 142/330 (43%)
Query: 72 EKHKVSVEKVLS-IVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDT 130
+ K + LS I V RI+ R T+ GH + ++ + D R L S S D
Sbjct: 20 DARKACADATLSQITNNIDPVGRIQM--RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDG 77
Query: 131 TVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPS---GN 187
+ +WD T + +WV+ A++ G ++ G ++ +T + +
Sbjct: 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSR 137
Query: 188 PLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVK 247
L+GH +++ + L+ + V++S D +WD+ + +GHT V +
Sbjct: 138 ELAGHTGYLSCCRF----LDD--NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLS 191
Query: 248 WGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGK 305
D ++ +G+ D + K+W+ +G + GH +N++ A TG+ D T +
Sbjct: 192 LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251
Query: 306 QYSSPEEMKKAALERYNKIKG-------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTG 358
+ + + N I G + L++G DDF +W+ A+ + G
Sbjct: 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWD-ALKADRAGVLAG 310
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
H V+ + + DG VA+ S+D +K+WN
Sbjct: 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 177 (67.4 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 70/271 (25%), Positives = 112/271 (41%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++ P
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGN 110
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDCT 262
C D I+++ R+ + +S GHT ++C ++ D I T S D T
Sbjct: 111 YVAC-----GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERY 321
+W+ G+ GH V SL+L+ + L +GA D + K + E M + +
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 322 ----NKI----KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSP 370
N I GNA +GSDD T L++ ++ T H ++ V FS
Sbjct: 226 ESDINAICFFPNGNA---FATGSDDATCRLFDLRADQELMTY--SHDNIICGITSVSFSK 280
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
G+ + + D + +W+ V GH
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311
Score = 138 (53.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 55/224 (24%), Positives = 90/224 (40%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--STE 292
L GH + + WG D ++ + SQD + +W++ + + WV + A S
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMF 342
Y + G D+ Y+ + R ++ G+ ++V+ S D T
Sbjct: 111 Y-VACGGLDNICSIYNLKTREGNVRVSR--ELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +Q T TGH V + +PD + S + D S KLW+ G F GH
Sbjct: 168 LWDIETGQQTTT-FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 403 GPVYQIRFELIYCFRYPSN--FYCVVDMSCCMSLYSWSADSRLL 444
+ I CF +P+ F D + C L+ AD L+
Sbjct: 227 SDINAI------CF-FPNGNAFATGSDDATCR-LFDLRADQELM 262
Score = 41 (19.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKV 455
C ++ S+S RLLL+G D V
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNV 296
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 225 (84.3 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 75/330 (22%), Positives = 142/330 (43%)
Query: 72 EKHKVSVEKVLS-IVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDT 130
+ K + LS I V RI+ R T+ GH + ++ + D R L S S D
Sbjct: 20 DARKACADATLSQITNNIDPVGRIQM--RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDG 77
Query: 131 TVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPS---GN 187
+ +WD T + +WV+ A++ G ++ G ++ +T + +
Sbjct: 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSR 137
Query: 188 PLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVK 247
L+GH +++ + L+ + V++S D +WD+ + +GHT V +
Sbjct: 138 ELAGHTGYLSCCRF----LDD--NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLS 191
Query: 248 WGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGK 305
D ++ +G+ D + K+W+ +G + GH +N++ A TG+ D T +
Sbjct: 192 LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251
Query: 306 QYSSPEEMKKAALERYNKIKG-------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTG 358
+ + + N I G + L++G DDF +W+ A+ + G
Sbjct: 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWD-ALKADRAGVLAG 310
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
H V+ + + DG VA+ S+D +K+WN
Sbjct: 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 177 (67.4 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 70/271 (25%), Positives = 112/271 (41%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++ P
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGN 110
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDCT 262
C D I+++ R+ + +S GHT ++C ++ D I T S D T
Sbjct: 111 YVAC-----GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERY 321
+W+ G+ GH V SL+L+ + L +GA D + K + E M + +
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 322 ----NKI----KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSP 370
N I GNA +GSDD T L++ ++ T H ++ V FS
Sbjct: 226 ESDINAICFFPNGNA---FATGSDDATCRLFDLRADQELMTY--SHDNIICGITSVSFSK 280
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
G+ + + D + +W+ V GH
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311
Score = 138 (53.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 55/224 (24%), Positives = 90/224 (40%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--STE 292
L GH + + WG D ++ + SQD + +W++ + + WV + A S
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMF 342
Y + G D+ Y+ + R ++ G+ ++V+ S D T
Sbjct: 111 Y-VACGGLDNICSIYNLKTREGNVRVSR--ELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +Q T TGH V + +PD + S + D S KLW+ G F GH
Sbjct: 168 LWDIETGQQTTT-FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 403 GPVYQIRFELIYCFRYPSN--FYCVVDMSCCMSLYSWSADSRLL 444
+ I CF +P+ F D + C L+ AD L+
Sbjct: 227 SDINAI------CF-FPNGNAFATGSDDATCR-LFDLRADQELM 262
Score = 41 (19.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKV 455
C ++ S+S RLLL+G D V
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNV 296
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 225 (84.3 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 75/330 (22%), Positives = 142/330 (43%)
Query: 72 EKHKVSVEKVLS-IVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDT 130
+ K + LS I V RI+ R T+ GH + ++ + D R L S S D
Sbjct: 20 DARKACADATLSQITNNIDPVGRIQM--RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDG 77
Query: 131 TVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPS---GN 187
+ +WD T + +WV+ A++ G ++ G ++ +T + +
Sbjct: 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSR 137
Query: 188 PLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVK 247
L+GH +++ + L+ + V++S D +WD+ + +GHT V +
Sbjct: 138 ELAGHTGYLSCCRF----LDD--NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLS 191
Query: 248 WGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGK 305
D ++ +G+ D + K+W+ +G + GH +N++ A TG+ D T +
Sbjct: 192 LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251
Query: 306 QYSSPEEMKKAALERYNKIKG-------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTG 358
+ + + N I G + L++G DDF +W+ A+ + G
Sbjct: 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWD-ALKADRAGVLAG 310
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
H V+ + + DG VA+ S+D +K+WN
Sbjct: 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 177 (67.4 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 70/271 (25%), Positives = 112/271 (41%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++ P
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGN 110
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDCT 262
C D I+++ R+ + +S GHT ++C ++ D I T S D T
Sbjct: 111 YVAC-----GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERY 321
+W+ G+ GH V SL+L+ + L +GA D + K + E M + +
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 322 ----NKI----KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSP 370
N I GNA +GSDD T L++ ++ T H ++ V FS
Sbjct: 226 ESDINAICFFPNGNA---FATGSDDATCRLFDLRADQELMTY--SHDNIICGITSVSFSK 280
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
G+ + + D + +W+ V GH
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311
Score = 138 (53.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 55/224 (24%), Positives = 90/224 (40%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--STE 292
L GH + + WG D ++ + SQD + +W++ + + WV + A S
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMF 342
Y + G D+ Y+ + R ++ G+ ++V+ S D T
Sbjct: 111 Y-VACGGLDNICSIYNLKTREGNVRVSR--ELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +Q T TGH V + +PD + S + D S KLW+ G F GH
Sbjct: 168 LWDIETGQQTTT-FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 403 GPVYQIRFELIYCFRYPSN--FYCVVDMSCCMSLYSWSADSRLL 444
+ I CF +P+ F D + C L+ AD L+
Sbjct: 227 SDINAI------CF-FPNGNAFATGSDDATCR-LFDLRADQELM 262
Score = 41 (19.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKV 455
C ++ S+S RLLL+G D V
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNV 296
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 225 (84.3 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 75/330 (22%), Positives = 142/330 (43%)
Query: 72 EKHKVSVEKVLS-IVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDT 130
+ K + LS I V RI+ R T+ GH + ++ + D R L S S D
Sbjct: 20 DARKACADATLSQITNNIDPVGRIQM--RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDG 77
Query: 131 TVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPS---GN 187
+ +WD T + +WV+ A++ G ++ G ++ +T + +
Sbjct: 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSR 137
Query: 188 PLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVK 247
L+GH +++ + L+ + V++S D +WD+ + +GHT V +
Sbjct: 138 ELAGHTGYLSCCRF----LDD--NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLS 191
Query: 248 WGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGK 305
D ++ +G+ D + K+W+ +G + GH +N++ A TG+ D T +
Sbjct: 192 LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251
Query: 306 QYSSPEEMKKAALERYNKIKG-------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTG 358
+ + + N I G + L++G DDF +W+ A+ + G
Sbjct: 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWD-ALKADRAGVLAG 310
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
H V+ + + DG VA+ S+D +K+WN
Sbjct: 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 177 (67.4 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 70/271 (25%), Positives = 112/271 (41%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++ P
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGN 110
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDCT 262
C D I+++ R+ + +S GHT ++C ++ D I T S D T
Sbjct: 111 YVAC-----GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERY 321
+W+ G+ GH V SL+L+ + L +GA D + K + E M + +
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 322 ----NKI----KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSP 370
N I GNA +GSDD T L++ ++ T H ++ V FS
Sbjct: 226 ESDINAICFFPNGNA---FATGSDDATCRLFDLRADQELMTY--SHDNIICGITSVSFSK 280
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
G+ + + D + +W+ V GH
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311
Score = 138 (53.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 55/224 (24%), Positives = 90/224 (40%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--STE 292
L GH + + WG D ++ + SQD + +W++ + + WV + A S
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMF 342
Y + G D+ Y+ + R ++ G+ ++V+ S D T
Sbjct: 111 Y-VACGGLDNICSIYNLKTREGNVRVSR--ELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +Q T TGH V + +PD + S + D S KLW+ G F GH
Sbjct: 168 LWDIETGQQTTT-FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 403 GPVYQIRFELIYCFRYPSN--FYCVVDMSCCMSLYSWSADSRLL 444
+ I CF +P+ F D + C L+ AD L+
Sbjct: 227 SDINAI------CF-FPNGNAFATGSDDATCR-LFDLRADQELM 262
Score = 41 (19.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKV 455
C ++ S+S RLLL+G D V
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNV 296
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 225 (84.3 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 75/330 (22%), Positives = 142/330 (43%)
Query: 72 EKHKVSVEKVLS-IVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDT 130
+ K + LS I V RI+ R T+ GH + ++ + D R L S S D
Sbjct: 20 DARKACADATLSQITNNIDPVGRIQM--RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDG 77
Query: 131 TVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPS---GN 187
+ +WD T + +WV+ A++ G ++ G ++ +T + +
Sbjct: 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSR 137
Query: 188 PLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVK 247
L+GH +++ + L+ + V++S D +WD+ + +GHT V +
Sbjct: 138 ELAGHTGYLSCCRF----LDD--NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLS 191
Query: 248 WGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGK 305
D ++ +G+ D + K+W+ +G + GH +N++ A TG+ D T +
Sbjct: 192 LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251
Query: 306 QYSSPEEMKKAALERYNKIKG-------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTG 358
+ + + N I G + L++G DDF +W+ A+ + G
Sbjct: 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWD-ALKADRAGVLAG 310
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
H V+ + + DG VA+ S+D +K+WN
Sbjct: 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 177 (67.4 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 70/271 (25%), Positives = 112/271 (41%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++ P
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGN 110
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDCT 262
C D I+++ R+ + +S GHT ++C ++ D I T S D T
Sbjct: 111 YVAC-----GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERY 321
+W+ G+ GH V SL+L+ + L +GA D + K + E M + +
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 322 ----NKI----KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSP 370
N I GNA +GSDD T L++ ++ T H ++ V FS
Sbjct: 226 ESDINAICFFPNGNA---FATGSDDATCRLFDLRADQELMTY--SHDNIICGITSVSFSK 280
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
G+ + + D + +W+ V GH
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311
Score = 138 (53.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 55/224 (24%), Positives = 90/224 (40%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--STE 292
L GH + + WG D ++ + SQD + +W++ + + WV + A S
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMF 342
Y + G D+ Y+ + R ++ G+ ++V+ S D T
Sbjct: 111 Y-VACGGLDNICSIYNLKTREGNVRVSR--ELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +Q T TGH V + +PD + S + D S KLW+ G F GH
Sbjct: 168 LWDIETGQQTTT-FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 403 GPVYQIRFELIYCFRYPSN--FYCVVDMSCCMSLYSWSADSRLL 444
+ I CF +P+ F D + C L+ AD L+
Sbjct: 227 SDINAI------CF-FPNGNAFATGSDDATCR-LFDLRADQELM 262
Score = 41 (19.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKV 455
C ++ S+S RLLL+G D V
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNV 296
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 225 (84.3 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 72/316 (22%), Positives = 136/316 (43%)
Query: 89 QAVFRIRPVNRCSA----TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF 144
Q I PV R T+ GH + ++ + D R L S S D + +WD T +
Sbjct: 32 QITANIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVH 91
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPS---GNPLSGHKKWITGISW 201
+WV+ A++ G ++ G ++ +T + + L+GH +++ +
Sbjct: 92 AIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF 151
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQD 260
L+ + V++S D +WD+ + +GHT V + D ++ +G+ D
Sbjct: 152 ----LDD--NQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACD 205
Query: 261 CTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALE 319
+ K+W+ +G + GH +N++ A TG+ D T + + + +
Sbjct: 206 ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYS 265
Query: 320 RYNKIKG-------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
N I G + L++G DDF +W+ A+ + GH V+ + + DG
Sbjct: 266 HDNIICGITSVAFSKSGRLLLAGYDDFNCNVWD-ALKADRAGVLAGHDNRVSCLGVTDDG 324
Query: 373 QWVASASFDKSIKLWN 388
VA+ S+D +K+WN
Sbjct: 325 MAVATGSWDSFLKIWN 340
Score = 175 (66.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 69/271 (25%), Positives = 112/271 (41%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++ P
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGN 110
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDCT 262
C D I+++ R+ + +S GHT ++C ++ D I T S D T
Sbjct: 111 YVAC-----GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERY 321
+W+ G+ GH V SL+L+ + L +GA D + K + E M + +
Sbjct: 166 CALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 322 ----NKI----KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSP 370
N I GNA +GSDD T L++ ++ + H ++ V FS
Sbjct: 226 ESDINAICFFPNGNA---FATGSDDATCRLFDLRADQE--LMVYSHDNIICGITSVAFSK 280
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
G+ + + D + +W+ V GH
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311
Score = 134 (52.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 54/225 (24%), Positives = 90/225 (40%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--STE 292
L GH + + WG D ++ + SQD + +W++ + + WV + A S
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMF 342
Y + G D+ Y+ + R ++ G+ ++V+ S D T
Sbjct: 111 Y-VACGGLDNICSIYNLKTREGNVRVSR--ELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +Q T GH V + +PD + S + D S KLW+ G F GH
Sbjct: 168 LWDIETGQQTTT-FAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 403 GPVYQIRFELIYCFRYPSN--FYCVVDMSCCMSLYSWSADSRLLL 445
+ I CF +P+ F D + C L+ AD L++
Sbjct: 227 SDINAI------CF-FPNGNAFATGSDDATCR-LFDLRADQELMV 263
Score = 38 (18.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKV 455
C ++ ++S RLLL+G D V
Sbjct: 271 CGITSVAFSKSGRLLLAGYDDFNCNV 296
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 222 (83.2 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 59/202 (29%), Positives = 98/202 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D +RLWDL + GH VL +A+S D +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 118
Query: 164 HLVSGSKAGELQCWDP--QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+VS S+ ++ W+ + GH+ W++ + + P L P VSAS D
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ-PT--IVSASWDKT 175
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGH 280
++W++S K L+GHT V+ V DG + +G +D + +W+ +GK + L+ +
Sbjct: 176 VKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN 235
Query: 281 GHWVNSLALSTEYALRTGAFDH 302
+++L S A +H
Sbjct: 236 SV-IHALCFSPNRYWLCAATEH 256
Score = 222 (83.2 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 70/231 (30%), Positives = 117/231 (50%)
Query: 103 TIAGHTEAVLSVAFSPDGRQL-ASGSGDTTVRLWDLNTQTPMF-----KCTGHKNWVLCI 156
T+ HT+ V ++A D + S S D ++ LW L + + TGH ++V +
Sbjct: 10 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDV 69
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
S+DG+ +SGS GEL+ WD G S GH K + +++ L+ R+ VSA
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLAAGV-STRRFVGHTKDVLSVAFS---LDN--RQIVSA 123
Query: 217 SKDGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGV---IYTGSQDCTIKVWETT 269
S+D ++W+ +L +C +S GH V+CV++ + + I + S D T+KVW +
Sbjct: 124 SRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS 182
Query: 270 QGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALE 319
KL L GH +V+++A+S + +L +G D + E K +LE
Sbjct: 183 NCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE 233
Score = 175 (66.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 49/178 (27%), Positives = 89/178 (50%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQ---TPMFKCTGHKNWVLCIAWSADG 162
GHT+ VLSVAFS D RQ+ S S D T++LW+ + T GH++WV C+ +S +
Sbjct: 103 GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT 162
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+VS S ++ W+ K L+GH +++ ++ P + C S KDG
Sbjct: 163 LQPTIVSASWDKTVKVWNLSNCKLRST-LAGHTGYVSTVAVSPD--GSLC---ASGGKDG 216
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
+WD++ K + L +++ + + + + + + IK+W+ ++ +LK
Sbjct: 217 VVLLWDLAEGKKLYSLEANSV-IHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLK 273
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 81/324 (25%), Positives = 136/324 (41%)
Query: 149 HKNWVLCIAWSADGKHL-VSGSKAGELQCWD-PQTGKPSG---NPLSGHKKWITGISWEP 203
H + V IA D + VS S+ + W + K G L+GH ++ E
Sbjct: 14 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFV-----ED 68
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
V L++ + +S S DG+ R+WD++ GHT V V + D I + S+D T
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRT 128
Query: 263 IKVWETT-QGKLIRELKGHGH--WVNSLALST---EYALRTGAFDHTGKQYSSPEEMKKA 316
IK+W T + K G GH WV+ + S + + + ++D T K ++ ++
Sbjct: 129 IKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRS 188
Query: 317 ALER---YNKIKGNAPERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPD 371
L Y +P+ + SG D + LW+ A K K +++ + FSP+
Sbjct: 189 TLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK--KLYSLEANSVIHALCFSPN 246
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCC 431
W+ +A+ + IK+W+ + V + + + YC
Sbjct: 247 RYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCT------ 299
Query: 432 MSLYSWSADSRLLLSGSKDSTLKV 455
SL +WSAD L SG D ++V
Sbjct: 300 -SL-NWSADGSTLFSGYTDGVIRV 321
Score = 134 (52.2 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 62/222 (27%), Positives = 94/222 (42%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW-----DVSLRKCVICLSGHTLAV 243
+ H +T I+ P+ NA VSAS+D +W D + L+GH+ V
Sbjct: 11 MRAHTDMVTAIA-TPID-NADI--IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
V DG +GS D +++W+ G R GH V S+A S + + + + D
Sbjct: 67 EDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD 126
Query: 302 HTGKQYSSPEEMKKAALERYN---------KIKGNAPE-RLVSGSDDFTMFLWEPAVSKQ 351
T K +++ E K E + N + +VS S D T+ +W + K
Sbjct: 127 RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL 186
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
T + GH V+ V SPDG AS D + LW+ GK
Sbjct: 187 RST-LAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK 227
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 43/143 (30%), Positives = 66/143 (46%)
Query: 97 VNRCSATIA----GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHK 150
+ C TI+ GH + V V FSP+ Q + S S D TV++W+L+ GH
Sbjct: 135 LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHT 194
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
+V +A S DG SG K G + WD GK + L + I + + P N
Sbjct: 195 GYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYS-LEANSV-IHALCFSP---N--- 246
Query: 211 RRFVSASKDGDARIWDVSLRKCV 233
R ++ A+ + +IWD+ + V
Sbjct: 247 RYWLCAATEHGIKIWDLESKSIV 269
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 209 (78.6 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 54/177 (30%), Positives = 86/177 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 18 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 77
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 78 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 134
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKG 279
+W+++ K GHT + V DG + +G +D +W+ +GK + L G
Sbjct: 135 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 191
Score = 153 (58.9 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 43/164 (26%), Positives = 81/164 (49%)
Query: 136 DLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKW 195
+ N P GH ++V + S+DG+ +SGS G L+ WD TG + GH K
Sbjct: 8 ETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR-FVGHTKD 66
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIWD-VSLRKCVICLSGHTLAVTCVKWGGDG-- 252
+ +++ ++ R+ VS S+D ++W+ + + K + H+ V+CV++ +
Sbjct: 67 VLSVAF-----SSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 121
Query: 253 -VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL 295
+I + D +KVW KL GH ++N++ +S + +L
Sbjct: 122 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL 165
Score = 137 (53.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 54/177 (30%), Positives = 79/177 (44%)
Query: 236 LSGHTLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH+ V+ V DG +GS D T+++W+ T G R GH V S+A S++
Sbjct: 18 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 77
Query: 295 -LRTGAFDHTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFL 343
+ +G+ D T K +Y+ +E + R++ N P +VS D + +
Sbjct: 78 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKV 135
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG 400
W A K KT GH +N V SPDG AS D LW+ GK + G
Sbjct: 136 WNLANCKL-KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 191
Score = 125 (49.1 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTE--YALRTGAFDHTGKQYSSPEEMKKAALERYNK- 323
ET G R L+GH H+V+ + +S++ +AL +G++D T + + + K
Sbjct: 8 ETNYGIPQRALRGHSHFVSDVVISSDGQFAL-SGSWDGTLRLWDLTTGTTTRRFVGHTKD 66
Query: 324 ---IKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ--WVAS 377
+ ++ R +VSGS D T+ LW + + H + V+ V FSP+ + S
Sbjct: 67 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 126
Query: 378 ASFDKSIKLWNGTTGKFVAVFRGHVG 403
+DK +K+WN K GH G
Sbjct: 127 CGWDKLVKVWNLANCKLKTNHIGHTG 152
Score = 112 (44.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
P+ + GH V+ V S DGQ+ S S+D +++LW+ TTG F GH V + F
Sbjct: 14 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF 72
Score = 109 (43.4 bits), Expect = 0.00088, P = 0.00088
Identities = 31/80 (38%), Positives = 41/80 (51%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
+SGS D T+ LW+ + R GH + V V FS D + + S S DK+IKLWN T G
Sbjct: 38 LSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN-TLG 95
Query: 393 --KFVAVFRGHVGPVYQIRF 410
K+ H V +RF
Sbjct: 96 VCKYTVQDESHSEWVSCVRF 115
Score = 55 (24.4 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 9/20 (45%), Positives = 18/20 (90%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
++S+D+R ++SGS+D T+K+
Sbjct: 71 AFSSDNRQIVSGSRDKTIKL 90
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 231 (86.4 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 91/338 (26%), Positives = 158/338 (46%)
Query: 85 VYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDL----NTQ 140
V+ P+ V R+ V + H V V FS DG+ LA+G + + +++D+ N
Sbjct: 249 VFNPE-VQRVLDVELVHHLV--HDSVVCCVRFSRDGKYLATGC-NRSAQIFDVTLGQNVA 304
Query: 141 TPMFKCTGHKN--WVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
+ ++ + +S DGK+L +G++ +++ WD T + + SGH++ I
Sbjct: 305 VLQDESVDKSGDLYIRSVCFSPDGKYLATGAEDKQIRVWDIAT-RTIKHIFSGHEQDIYS 363
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTG 257
+ + N R S S D R+WD++ K V LS VT V DG+ + G
Sbjct: 364 LDFAG---NG--RYIASGSGDKTVRLWDIAEGKLVYTLSIED-GVTTVAMSPDGLYVAAG 417
Query: 258 SQDCTIKVWETTQGKLIRELK---GHGHWVNSLALSTE-YALRTGAFDHTGK--QYSSPE 311
S D T++VW+TT G L+ L+ GH V S+A + L +G+ D T K + + P
Sbjct: 418 SLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPR 477
Query: 312 EMKKAALER---YNKIKGN---------APER--LVSGSDDFTMFLWEPAVSKQPKTRMT 357
+ +A + + +G+ P+ ++SGS D + W+P ++ + +
Sbjct: 478 QQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDP-ITGNAQMMLQ 536
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLW--NGTTGK 393
GH+ V V SP G A+ S D ++W + TG+
Sbjct: 537 GHKNSVISVAPSPTGNLFATGSGDMRARIWRYSAYTGR 574
Score = 140 (54.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 55/204 (26%), Positives = 88/204 (43%)
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL----- 277
R+ DV L ++ H V CV++ DG + + ++++ T G+ + L
Sbjct: 256 RVLDVELVHHLV----HDSVVCCVRFSRDGKYLATGCNRSAQIFDVTLGQNVAVLQDESV 311
Query: 278 -KGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNK------IKGNAP 329
K ++ S+ S + L TGA D + + K + + GN
Sbjct: 312 DKSGDLYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNG- 370
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+ SGS D T+ LW+ A K T + V V SPDG +VA+ S DK++++W+
Sbjct: 371 RYIASGSGDKTVRLWDIAEGKLVYTLSI--EDGVTTVAMSPDGLYVAAGSLDKTVRVWDT 428
Query: 390 TTGKFVAVFR---GHVGPVYQIRF 410
TTG V GH VY + F
Sbjct: 429 TTGYLVERLENPDGHKDSVYSVAF 452
Score = 140 (54.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 69/273 (25%), Positives = 119/273 (43%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHT------LAVTCVKWGGDG-VIYTGSQDCTIK 264
++++ + A+I+DV+L + V L + L + V + DG + TG++D I+
Sbjct: 282 KYLATGCNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSPDGKYLATGAEDKQIR 341
Query: 265 VWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYN 322
VW+ + GH + SL A + Y + +G+ D T + + E L +
Sbjct: 342 VWDIATRTIKHIFSGHEQDIYSLDFAGNGRY-IASGSGDKTVRLWDIAEGKLVYTLSIED 400
Query: 323 KIKGNA--PERL--VSGSDDFTMFLWEPAVSK--QPKTRMTGHQQLVNHVYFSPDGQWVA 376
+ A P+ L +GS D T+ +W+ + GH+ V V F+P+G+ +
Sbjct: 401 GVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELV 460
Query: 377 SASFDKSIKLWN-----------GTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCV 425
S S DK+IKLW G GK F GH F L C P + V
Sbjct: 461 SGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKD------FVLSVCLT-PDGHW-V 512
Query: 426 VDMSCCMSLYSW---SADSRLLLSGSKDSTLKV 455
+ S + W + +++++L G K+S + V
Sbjct: 513 MSGSKDRGVQFWDPITGNAQMMLQGHKNSVISV 545
>UNIPROTKB|F1P2Y8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0070545 "PeBoW complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:AADN02019869 IPI:IPI00587836
Ensembl:ENSGALT00000013803 Uniprot:F1P2Y8
Length = 411
Score = 227 (85.0 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 53/162 (32%), Positives = 85/162 (52%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
AT++GHTEA+ SV +S D ++ S S D T++LWD T TG+K + +++S
Sbjct: 239 ATLSGHTEAISSVLWS-DAEEICSASWDHTIKLWDAETGGLKSTLTGNKVFN-SVSYSPL 296
Query: 162 GKHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+ L SGS ++ WDP++ G L+ H W+T + W P H + + +S S D
Sbjct: 297 CRRLASGSTDRHIRLWDPRSKDGSLVLLSLTSHTGWVTSVKWSPTHEH----QLISGSLD 352
Query: 220 GDARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V CV W G++ +G D
Sbjct: 353 NIVKLWDTRSCKAPLYDLAAHEDKVLCVDWTEAGLLLSGGAD 394
Score = 171 (65.3 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 51/178 (28%), Positives = 84/178 (47%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GH + + WS D + + S S ++ WD +TG L+G+K +
Sbjct: 234 TRTPLATLSGHTEAISSVLWS-DAEEICSASWDHTIKLWDAETGGLKST-LTGNKVF-NS 290
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK---CVICLSGHTLAVTCVKWGG--DGV 253
+S+ P+ CRR S S D R+WD + ++ L+ HT VT VKW +
Sbjct: 291 VSYSPL-----CRRLASGSTDRHIRLWDPRSKDGSLVLLSLTSHTGWVTSVKWSPTHEHQ 345
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSP 310
+ +GS D +K+W+T K + +L H V + + L +G D+ Y P
Sbjct: 346 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLCVDWTEAGLLLSGGADNKLYCYRYP 403
Score = 147 (56.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 50/192 (26%), Positives = 92/192 (47%)
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKW-GGDGV---IYTGSQDCTIKVWE-TTQGKL 273
D ARIW + K ++ ++GHT V V W D + + + S D TI +WE +
Sbjct: 108 DQTARIWSLE-GKSIMTIAGHTEVVKDVAWVKQDSLSCLLISASMDQTILLWEWNVEKNK 166
Query: 274 IREL---KGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP 329
++ L +GH V+S+A+ T +G++D K +S+ ++ +E N P
Sbjct: 167 VKALHCCRGHAGSVDSVAVDCTRTKFCSGSWDKMLKIWSAVPTDEEDEMEE----AANRP 222
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+ + +++ P ++GH + ++ V +S D + + SAS+D +IKLW+
Sbjct: 223 RKKQKTE--------QLGLTRTPLATLSGHTEAISSVLWS-DAEEICSASWDHTIKLWDA 273
Query: 390 TTGKFVAVFRGH 401
TG + G+
Sbjct: 274 ETGGLKSTLTGN 285
Score = 117 (46.2 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 55/210 (26%), Positives = 88/210 (41%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLN----NEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P + LS ++NKLL + + + + F I L VPL +++E +S E+V
Sbjct: 9 PFSVPAASETADLSHLINKLLAARGADHKYVEFDFLIQGQFLRVPLVTHMEMENISTEEV 68
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ I Y + +P C H + + SV + + + +G D T R+W L ++
Sbjct: 69 VEIEYV-EKYMAPQP-EECIF----HDDWISSVQATEEW--ILTGCYDQTARIWSLEGKS 120
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKW 195
M GH V +AW D L+S S + W+ K L GH
Sbjct: 121 IM-TIAGHTEVVKDVAWVKQDSLSCLLISASMDQTILLWEWNVEKNKVKALHCCRGH--- 176
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
G S + V ++ +F S S D +IW
Sbjct: 177 -AG-SVDSVAVDCTRTKFCSGSWDKMLKIW 204
Score = 101 (40.6 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 42/157 (26%), Positives = 72/157 (45%)
Query: 236 LSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
LSGHT A++ V W I + S D TIK+W+ G L L G+ + NS++ S
Sbjct: 241 LSGHTEAISSVLWSDAEEICSASWDHTIKLWDAETGGLKSTLTGNKVF-NSVSYSPLCRR 299
Query: 295 LRTGAFDHTGKQY---SSPEEMKKAALERYN----KIKGNAPE--RLVSGSDDFTMFLWE 345
L +G+ D + + S + +L + +K + +L+SGS D + LW+
Sbjct: 300 LASGSTDRHIRLWDPRSKDGSLVLLSLTSHTGWVTSVKWSPTHEHQLISGSLDNIVKLWD 359
Query: 346 PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
K P + H+ V V ++ G ++ + +K
Sbjct: 360 TRSCKAPLYDLAAHEDKVLCVDWTEAGLLLSGGADNK 396
Score = 73 (30.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 29/106 (27%), Positives = 43/106 (40%)
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKT--RMTGHQQLVNHVYFSPDGQW-VASASFDKSIKLW 387
RL SGS D + LW+P +T H V V +SP + + S S D +KLW
Sbjct: 299 RLASGSTDRHIRLWDPRSKDGSLVLLSLTSHTGWVTSVKWSPTHEHQLISGSLDNIVKLW 358
Query: 388 NGTTGKFVAV-FRGHVGPVYQIRF------------ELIYCFRYPS 420
+ + K H V + + +YC+RYP+
Sbjct: 359 DTRSCKAPLYDLAAHEDKVLCVDWTEAGLLLSGGADNKLYCYRYPA 404
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 237 (88.5 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 79/278 (28%), Positives = 124/278 (44%)
Query: 59 SDHELLVPLG---SYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVA 115
+D LV G SY++ + + + S++ + R +P I GH+ V V+
Sbjct: 470 NDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRD----RHKPQENTRKLI-GHSGPVYGVS 524
Query: 116 FSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQ 175
FSPD + L S S D TVRLW L+T T + GH V + +S G + V+ S +
Sbjct: 525 FSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTAR 584
Query: 176 CWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVIC 235
W P +GH I + H N+ + S D R+WDV CV
Sbjct: 585 LWATDHIYPL-RIFAGH---INDVDCVEFHPNS--NYVFTGSSDKTCRMWDVHTGNCVRV 638
Query: 236 LSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHW-VNSLALSTE- 292
GHT +V C+ DG + +G +D I VW+ G+ ++ ++GH + SLA S +
Sbjct: 639 FLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDG 698
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERY---NKIKGN 327
L +G D++ + + + A E N + GN
Sbjct: 699 TVLVSGCADNSVRVWDVKKNTNDAGPEPEAFNNNVNGN 736
Score = 177 (67.4 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 56/210 (26%), Positives = 93/210 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN--------------TQTPMFK 145
C T + + F+ D +A+G D+ ++LW L+ Q K
Sbjct: 453 CMYTFHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRK 512
Query: 146 CTGHKNWVLCIAWSADGKHLVSGSKAGELQCW--DPQTGKPSGNPLSGHKKWITGISWEP 203
GH V +++S D K+L+S S+ ++ W D T S GH + + + + P
Sbjct: 513 LIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVS---YKGHTQPVWDVKFSP 569
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCT 262
+ FV+AS D AR+W + +GH V CV++ ++TGS D T
Sbjct: 570 LG-----HYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKT 624
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTE 292
++W+ G +R GH + VN LA+S +
Sbjct: 625 CRMWDVHTGNCVRVFLGHTNSVNCLAVSPD 654
Score = 170 (64.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 64/240 (26%), Positives = 107/240 (44%)
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
WS DGK L S K + PQ L GH + G+S+ P + + +S S
Sbjct: 488 WSLDGKPLKSVLKRDRHK---PQENT---RKLIGHSGPVYGVSFSPDN-----KYLLSCS 536
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRE 276
+D R+W + ++ GHT V VK+ G + T S D T ++W T +R
Sbjct: 537 EDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRI 596
Query: 277 LKGHGHWVNSLAL--STEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKGNA--PER 331
GH + V+ + ++ Y TG+ D T + + + L N + A P+
Sbjct: 597 FAGHINDVDCVEFHPNSNYVF-TGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDG 655
Query: 332 --LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL-VNHVYFSPDGQWVASASFDKSIKLWN 388
L SG +D + +W+ ++ K+ M GH + + + FS DG + S D S+++W+
Sbjct: 656 RWLASGGEDGIICVWDIGSGRRLKS-MRGHARASLYSLAFSRDGTVLVSGCADNSVRVWD 714
Score = 134 (52.2 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 45/183 (24%), Positives = 82/183 (44%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST-EY 293
L GH+ V V + D + + S+D T+++W + KGH V + S +
Sbjct: 513 LIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGH 572
Query: 294 ALRTGAFDHTGKQYSS----PEEMKKAALERYNKIKGNAPERLV-SGSDDFTMFLWEPAV 348
T + D T + +++ P + + + ++ + V +GS D T +W+
Sbjct: 573 YFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHT 632
Query: 349 SKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV-GPVYQ 407
+ + GH VN + SPDG+W+AS D I +W+ +G+ + RGH +Y
Sbjct: 633 GNCVRVFL-GHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYS 691
Query: 408 IRF 410
+ F
Sbjct: 692 LAF 694
Score = 46 (21.3 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 433 SLYS--WSADSRLLLSGSKDSTLKV 455
SLYS +S D +L+SG D++++V
Sbjct: 688 SLYSLAFSRDGTVLVSGCADNSVRV 712
Score = 40 (19.1 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 40 QIVNKLLNNEEKLPYAFYISDHELLVPLGSYLEK 73
++++K ++E KL + + SDH LV G +EK
Sbjct: 230 ELISKGFSSEAKLFFDKFRSDH--LVLHGIEVEK 261
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 233 (87.1 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 57/202 (28%), Positives = 94/202 (46%)
Query: 107 HTEAVLSVAFS-PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
H+ AV + R L +G D V LW + + GH + + + + A +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+G+ +G ++ WD + K L+GH+ + + P F S S D + +IW
Sbjct: 75 AAGAASGTIKLWDLEEAKIV-RTLTGHRSNCISVDFHPFG-----EFFASGSLDTNLKIW 128
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
D+ + C+ GHT V +++ DG + +G +D +KVW+ T GKL+ E K H +
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQI 188
Query: 285 NSLALST-EYALRTGAFDHTGK 305
SL E+ L TG+ D T K
Sbjct: 189 QSLDFHPHEFLLATGSADRTVK 210
Score = 194 (73.4 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 55/181 (30%), Positives = 86/181 (47%)
Query: 239 HTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL-STEYAL 295
H+ AV C+K G V+ TG +D + +W + I L GH ++S+ ++E +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 296 RTGAFDHTGKQYSSPEEMKKAAL--ERYNKIKGNA-P--ERLVSGSDDFTMFLWEPAVSK 350
GA T K + E L R N I + P E SGS D + +W+ + K
Sbjct: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD--IRK 132
Query: 351 QPKTRM-TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ GH + VN + F+PDG+WV S D +K+W+ T GK + F+ H G + +
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLD 192
Query: 410 F 410
F
Sbjct: 193 F 193
Score = 172 (65.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 45/168 (26%), Positives = 76/168 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH +SV F P G ASGS DT +++WD+ + + GH V + ++ DG
Sbjct: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG 155
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +VSG + ++ WD GK H+ I + + P + S D
Sbjct: 156 RWVVSGGEDNIVKVWDLTAGKLL-TEFKSHEGQIQSLDFHPHEF-----LLATGSADRTV 209
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKV--WE 267
+ WD+ + + T V C+ + DG + G Q+ ++K+ WE
Sbjct: 210 KFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQE-SLKIFSWE 256
Score = 162 (62.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 43/173 (24%), Positives = 81/173 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH+ + SV F +A+G+ T++LWDL + TGH++ + + + G
Sbjct: 54 SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ SGS L+ WD + K + GH + + + + P R VS +D
Sbjct: 114 EFFASGSLDTNLKIWDIRK-KGCIHTYKGHTRGVNVLRFTP-----DGRWVVSGGEDNIV 167
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQGKLI 274
++WD++ K + H + + + + ++ TGS D T+K W+ +LI
Sbjct: 168 KVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELI 220
Score = 140 (54.3 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 45/196 (22%), Positives = 86/196 (43%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT-GSQDCTIKVWETT 269
R V+ +D +W + ++ L GH+ + V + V+ G+ TIK+W+
Sbjct: 30 RVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLE 89
Query: 270 QGKLIRELKGHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEEMKKAALERY------ 321
+ K++R L GH S+ E+ +G+ D K + + KK + Y
Sbjct: 90 EAKIVRTLTGHRSNCISVDFHPFGEF-FASGSLDTNLKIW---DIRKKGCIHTYKGHTRG 145
Query: 322 -NKIKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
N ++ R +VSG +D + +W+ K T H+ + + F P +A+ S
Sbjct: 146 VNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKL-LTEFKSHEGQIQSLDFHPHEFLLATGS 204
Query: 380 FDKSIKLWNGTTGKFV 395
D+++K W+ T + +
Sbjct: 205 ADRTVKFWDLETFELI 220
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 226 (84.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 52/161 (32%), Positives = 84/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GH EA+ SV +S D ++ S S D T+ +WD+ + + TG+K + CI++S
Sbjct: 252 TLSGHKEAISSVLWS-DAEEICSASWDHTIGVWDVESGSLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHE----QQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTNTGLLLSGGAD 406
Score = 172 (65.6 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 54/176 (30%), Positives = 86/176 (48%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GHK + + WS D + + S S + WD ++G L+G+K +
Sbjct: 246 TRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIGVWDVESGSLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT VKW +
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ +GS D +K+W+T K + +L H V S+ + L +G D+ K YS
Sbjct: 358 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTNTGLLLSGGADN--KLYS 411
Score = 145 (56.1 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 63/274 (22%), Positives = 120/274 (43%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ I + + +++GS + W + GK S + GH + ++W V
Sbjct: 96 QCMFHDDWISAIEGAEEW--ILTGSYDKTSRIWSSE-GK-SIMTIVGHTDVVKDVAW--V 149
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGVIY-TGSQ 259
++ +SAS D +W+ ++ K + C GH +V + G + +GS
Sbjct: 150 KKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTRFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALE 319
D +K+W T E++ ST + + G +P E
Sbjct: 210 DKMLKIWSTVPTDEEDEMEE----------STNRPRKKQKTEQLGLT-RTPIVTLSGHKE 258
Query: 320 RYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ + + E + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS S
Sbjct: 259 AISSVLWSDAEEICSASWDHTIGVWD-VESGSLKSTLTGNK-VFNCISYSPLCKRLASGS 316
Query: 380 FDKSIKLWNGTT--GKFVAV-FRGHVGPVYQIRF 410
D+ I+LW+ T G V++ H G V +++
Sbjct: 317 TDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Score = 136 (52.9 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
Score = 107 (42.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 52/210 (24%), Positives = 90/210 (42%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLN--NE--EKLPYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P + LS I+NKLL NE + + + F I L +PL ++E +S E+V
Sbjct: 21 PFSIPAASEIADLSNIINKLLEAKNEFHKHVEFDFLIKGQFLRMPLFKHMELENISSEEV 80
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ + Y + + +C H + + ++ + + + +GS D T R+W ++
Sbjct: 81 VELEYVEK--YTAPQPEQCMF----HDDWISAIEGAEEW--ILTGSYDKTSRIWSSEGKS 132
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKW 195
M GH + V +AW D L+S S + W+ + L GH
Sbjct: 133 IM-TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGH--- 188
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
G S + + +++ RF S S D +IW
Sbjct: 189 -AG-SVDSIAVDSTGTRFCSGSWDKMLKIW 216
Score = 99 (39.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 40/163 (24%), Positives = 73/163 (44%)
Query: 230 RKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
R ++ LSGH A++ V W I + S D TI VW+ G L L G+ + N ++
Sbjct: 247 RTPIVTLSGHKEAISSVLWSDAEEICSASWDHTIGVWDVESGSLKSTLTGNKVF-NCISY 305
Query: 290 STEYA-LRTGAFDHTGKQY---SSPEEMKKAALERYN----KIKGNAP--ERLVSGSDDF 339
S L +G+ D + + + + +L + +K + ++L+SGS D
Sbjct: 306 SPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDN 365
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ LW+ K P + H+ V V ++ G ++ + +K
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTNTGLLLSGGADNK 408
Score = 98 (39.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 35/120 (29%), Positives = 54/120 (45%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG---NAP--ER 331
L GH ++S+ S + + ++DHT + K+ L NK+ +P +R
Sbjct: 253 LSGHKEAISSVLWSDAEEICSASWDHTIGVWDVESGSLKSTLTG-NKVFNCISYSPLCKR 311
Query: 332 LVSGSDDFTMFLWEPAVSKQP--KTRMTGHQQLVNHVYFSPDG-QWVASASFDKSIKLWN 388
L SGS D + LW+P +T H V V +SP Q + S S D +KLW+
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWD 371
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 223 (83.6 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 86/324 (26%), Positives = 150/324 (46%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW +
Sbjct: 42 PGALLQTGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDC 100
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 157
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K I +T V V + D +I +G
Sbjct: 158 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQII-SGG 213
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 313 -MK--KAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEP----AVSKQPKTRMTGHQ 360
+K + + + K ++ + +P+ ++ +GS D ++ W ++ + P+ R++ +
Sbjct: 274 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPWHSLSVRSLGQIPRHRLSRQE 333
Query: 361 QLVNHVYFSPDGQWVASASFDKSI 384
V +G + SAS DK +
Sbjct: 334 DSVK----PQEGIXILSASSDKRL 353
Score = 184 (69.8 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 77/294 (26%), Positives = 129/294 (43%)
Query: 167 SGSKAGELQCWDP---QTGKPSGNPLSGHKKWITGISWE----PVHLNAPCRRFVSASKD 219
SG AG+ Q QTG P + L ++G E H N SA D
Sbjct: 31 SGPGAGQQQATPGALLQTGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGST--LASAGFD 88
Query: 220 GDARIWDVSLRKC--VICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRE 276
+W V C L GH+ AV + + DG ++++ S D T+ VW++ G+ ++
Sbjct: 89 RLILLWSV-YGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR 147
Query: 277 LKGHGHWVNSL--ALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIK------GN 327
LKGH +VNS A + TG+ D T K + + KKAA++ + N + +
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW---DIRKKAAIQTFQNTYQVLAVTFND 204
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
++++SG D + +W+ +K T M GH V + S +G ++ S + D ++++W
Sbjct: 205 TSDQIISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Query: 388 N----GTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSW 437
+ + V +F+G+V + L+ C P S LY W
Sbjct: 264 DVRPFAPKERCVKIFQGNV---HNFEKNLLRCSWSPDGSKIAAG-SADSFLYPW 313
Score = 141 (54.7 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 61/264 (23%), Positives = 113/264 (42%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ +GH+ V C + +G L S + W + L GH +G
Sbjct: 57 QAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGH----SGA 112
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV-TCVKWG-GDGVIYTG 257
E +H N SAS D +WD + V L GHT V +C G ++ TG
Sbjct: 113 VME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 171
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
S D T+K+W+ + I+ + + + V ++ + T + +G D+ K + +
Sbjct: 172 SDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 230
Query: 317 ALERY-NKIKG----NAPERLVSGSDDFTMFLWE--PAVSKQPKTRM-TGH----QQLVN 364
+ + + + G + L+S + D T+ +W+ P K+ ++ G+ ++ +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 365 HVYFSPDGQWVASASFDKSIKLWN 388
+SPDG +A+ S D + W+
Sbjct: 291 RCSWSPDGSKIAAGSADSFLYPWH 314
Score = 44 (20.5 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 436 SWSADSRLLLSGSKDSTL 453
SWS D + +GS DS L
Sbjct: 293 SWSPDGSKIAAGSADSFL 310
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 228 (85.3 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 66/211 (31%), Positives = 99/211 (46%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A I GH+ V V + P GR L + D + RLWDL Q + GH V IA+ D
Sbjct: 316 ADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTD 375
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
G +G + WD +TG+ L GH K I G+++ P N + S D
Sbjct: 376 GSLAGTGGLDAFGRVWDLRTGRCIMF-LEGHLKEIYGLNFSP---NG--YHVATGSGDNT 429
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGD--GVIYTGSQDCTIKVWETTQGKLIRELKG 279
++WD+ RKC+ + H VT VK+ + + TG+ D T K+W ++ L G
Sbjct: 430 CKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAG 489
Query: 280 HGHWVNSLALSTEYAL-RTGAFDHTGKQYSS 309
H V L +S + L T ++D T K +++
Sbjct: 490 HEGKVMGLDISLDGQLIATCSYDRTFKLWTA 520
Score = 227 (85.0 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 81/312 (25%), Positives = 140/312 (44%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
+R +N + I G + FSP+ + LA+ +LW + + GH V
Sbjct: 217 LRSLNNFCSQI-GDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNV 275
Query: 154 LCIAW------SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
I + S D K +L S + G ++ W ++ +P + + GH + + W H
Sbjct: 276 GAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESDEPVAD-IEGHSMRVARVMW---H 331
Query: 206 LNAPCRRFVSAS-KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
P RF+ + D R+WD+ ++ ++ GH+ V + + DG + TG D
Sbjct: 332 ---PSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFG 388
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERY- 321
+VW+ G+ I L+GH + L S Y + TG+ D+T K + + + +
Sbjct: 389 RVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQ 448
Query: 322 NKIKG-----NAPERLVSGSDDFTMFLW-EPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
N + G N L++G+ D T +W P S P + GH+ V + S DGQ +
Sbjct: 449 NLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWS--PLKTLAGHEGKVMGLDISLDGQLI 506
Query: 376 ASASFDKSIKLW 387
A+ S+D++ KLW
Sbjct: 507 ATCSYDRTFKLW 518
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 68/267 (25%), Positives = 114/267 (42%)
Query: 158 WSADGKHLVSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEP---VHLNAPCRRF 213
+S + K L + +G + W P + L GH + I + P V L+
Sbjct: 238 FSPNSKLLATACWSGLCKLWSVPDCNLV--HTLRGHSTNVGAIVFHPKATVSLDKKDVNL 295
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
S + DG ++W + + V + GH++ V V W G + T D + ++W+ +
Sbjct: 296 ASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQE 355
Query: 273 LIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERYNK-IKG-N-A 328
I +GH V +A T+ +L TG D G+ + LE + K I G N +
Sbjct: 356 EILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFS 415
Query: 329 PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPD-GQWVASASFDKSIK 385
P + +GS D T +W+ K T + HQ LV V F P+ G ++ + ++D + K
Sbjct: 416 PNGYHVATGSGDNTCKVWDLRQRKCIYT-IPAHQNLVTGVKFEPNHGNFLLTGAYDNTAK 474
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFEL 412
+W + GH G V + L
Sbjct: 475 IWTHPGWSPLKTLAGHEGKVMGLDISL 501
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 35/136 (25%), Positives = 67/136 (49%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R RC + GH + + + FSP+G +A+GSGD T ++WDL + ++ H+
Sbjct: 390 VWDLR-TGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQ 448
Query: 151 NWVLCIAWSAD-GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP 209
N V + + + G L++G+ + W P L+GH+ + G+ + L+
Sbjct: 449 NLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPL-KTLAGHEGKVMGLD---ISLDG- 503
Query: 210 CRRFVSASKDGDARIW 225
+ + S D ++W
Sbjct: 504 -QLIATCSYDRTFKLW 518
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 213 (80.0 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 48/142 (33%), Positives = 77/142 (54%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ +D Q +G LSGH W+ +++ P + FVS+S D ++WDV R
Sbjct: 211 DGYIKIYDVQHANLAGT-LSGHASWVLNVAFCPDDTH-----FVSSSSDKSVKVWDVGTR 264
Query: 231 KCVICLSGHTLAVTCVKWGGDG 252
CV H V VK+ G+G
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNG 286
Score = 181 (68.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 53/189 (28%), Positives = 88/189 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT--QTPMFKCTGHKNWVLCIAWSA 160
++ GH V+SV S AS S D +RLWDL Q W L A+S
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTL--AFSP 116
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
D ++L +G+ G++ + ++GK + L K+I I++ P + S + DG
Sbjct: 117 DSQYLATGTHVGKVNIFGVESGKKEYS-LDTRGKFILSIAYSP-----DGKYLASGAIDG 170
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
I+D++ K + L GH + + + + D ++ T S D IK+++ L L G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 280 HGHWVNSLA 288
H WV ++A
Sbjct: 231 HASWVLNVA 239
Score = 177 (67.4 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 52/164 (31%), Positives = 84/164 (51%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AG +A ++AFSPD + LA+G+ V ++ + + + ++L IA+S DGK+
Sbjct: 104 AGPVDA-WTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 162
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L SG+ G + +D TGK + L GH I +++ P + V+AS DG +I
Sbjct: 163 LASGAIDGIINIFDIATGKLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKI 216
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWE 267
+DV LSGH V V + D + + S D ++KVW+
Sbjct: 217 YDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 62/274 (22%), Positives = 116/274 (42%)
Query: 149 HKNWVLCIAWSADGKH----LVSGSKAGELQCWDPQTGKPSGN-PLSGHKKWITGISWEP 203
H + + +AW + K +V+GS ++ W + + L GH+ + +
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVD--- 71
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
+ P S+S D R+WD+ K + + + + + D + TG+
Sbjct: 72 ISHTLPIA--ASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGK 129
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERY 321
+ ++ GK L G ++ S+A S + L +GA D + LE +
Sbjct: 130 VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Query: 322 NK-IKGN--APER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVA 376
I+ +P+ LV+ SDD + +++ + T ++GH V +V F PD
Sbjct: 190 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-LSGHASWVLNVAFCPDDTHFV 248
Query: 377 SASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
S+S DKS+K+W+ T V F H V+ +++
Sbjct: 249 SSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKY 282
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FSPD + L + S D ++++D+ +GH +WVL +A+ D
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
H VS S ++ WD T + + H+ + G+ +
Sbjct: 245 THFVSSSSDKSVKVWDVGT-RTCVHTFFDHQDQVWGVKY 282
Score = 124 (48.7 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 24/77 (31%), Positives = 45/77 (58%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ ++ N + T++GH VL+VAF PD S S D +V++WD+ T+T + H+
Sbjct: 216 IYDVQHAN-LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQ 274
Query: 151 NWVLCIAWSADGKHLVS 167
+ V + ++ +G +VS
Sbjct: 275 DQVWGVKYNGNGSKIVS 291
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 221 (82.9 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 71/316 (22%), Positives = 135/316 (42%)
Query: 89 QAVFRIRPVNRCSA----TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF 144
Q I PV R T+ GH + ++ + D R L S S D + +WD T +
Sbjct: 32 QITANIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVH 91
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPS---GNPLSGHKKWITGISW 201
+WV+ A++ G ++ G + +T + + L+GH +++ +
Sbjct: 92 AIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRF 151
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQD 260
L+ + V++S D +WD+ + +GHT V + D ++ +G+ D
Sbjct: 152 ----LDD--NQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACD 205
Query: 261 CTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALE 319
+ K+W+ +G + GH +N++ A TG+ D T + + + +
Sbjct: 206 ASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYS 265
Query: 320 RYNKIKG-------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
N I G + L++G DDF +W+ + + + GH V+ + + DG
Sbjct: 266 HDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGV-LAGHDNRVSCLGVTDDG 324
Query: 373 QWVASASFDKSIKLWN 388
VA+ S+D +K+WN
Sbjct: 325 MAVATGSWDSFLKIWN 340
Score = 172 (65.6 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 69/271 (25%), Positives = 111/271 (40%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++ P
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGN 110
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDCT 262
C D I+ + R+ + +S GHT ++C ++ D I T S D T
Sbjct: 111 YVAC-----GGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERY 321
+W+ G+ GH V SL+L+ + L +GA D + K + E M + +
Sbjct: 166 CALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGH 225
Query: 322 ----NKI----KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSP 370
N I GNA +GSDD T L++ ++ + H ++ V FS
Sbjct: 226 ESDINAICFFPNGNA---FATGSDDATCRLFDLRADQE--LMVYSHDNIICGITSVAFSK 280
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
G+ + + D + +W+ V GH
Sbjct: 281 SGRLLLAGYDDFNCNVWDTLKADRAGVLAGH 311
Score = 136 (52.9 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 55/225 (24%), Positives = 90/225 (40%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--STE 292
L GH + + WG D ++ + SQD + +W++ + + WV + A S
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMF 342
Y + G D+ YS + R ++ G+ ++V+ S D T
Sbjct: 111 Y-VACGGLDNICSIYSLKTREGNVRVSR--ELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +Q T GH V + +PD + S + D S KLW+ G F GH
Sbjct: 168 LWDIETGQQTTT-FAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHE 226
Query: 403 GPVYQIRFELIYCFRYPSN--FYCVVDMSCCMSLYSWSADSRLLL 445
+ I CF +P+ F D + C L+ AD L++
Sbjct: 227 SDINAI------CF-FPNGNAFATGSDDATCR-LFDLRADQELMV 263
Score = 38 (18.4 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKV 455
C ++ ++S RLLL+G D V
Sbjct: 271 CGITSVAFSKSGRLLLAGYDDFNCNV 296
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 216 (81.1 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 52/158 (32%), Positives = 84/158 (53%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ +D Q +G LSGH W+ +++ P + FVS+S D ++WDV R
Sbjct: 211 DGYIKIYDVQHANLAGT-LSGHASWVLNVAFCPDDTH-----FVSSSSDKSVKVWDVGTR 264
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
CV H V VK+ G+G I + D I V++
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 182 (69.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 53/189 (28%), Positives = 89/189 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT--QTPMFKCTGHKNWVLCIAWSA 160
++ GH V+SV S AS S D +RLWDL+ Q W L A+S
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTL--AFSP 116
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
D ++L +G+ G++ + ++GK + L K+I I++ P + S + DG
Sbjct: 117 DSQYLATGTHVGKVNIFGVESGKKEYS-LDTRGKFILSIAYSP-----DGKYLASGAIDG 170
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
I+D++ K + L GH + + + + D ++ T S D IK+++ L L G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 280 HGHWVNSLA 288
H WV ++A
Sbjct: 231 HASWVLNVA 239
Score = 177 (67.4 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 52/164 (31%), Positives = 84/164 (51%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AG +A ++AFSPD + LA+G+ V ++ + + + ++L IA+S DGK+
Sbjct: 104 AGPVDA-WTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 162
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L SG+ G + +D TGK + L GH I +++ P + V+AS DG +I
Sbjct: 163 LASGAIDGIINIFDIATGKLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKI 216
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWE 267
+DV LSGH V V + D + + S D ++KVW+
Sbjct: 217 YDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Score = 146 (56.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 33/124 (26%), Positives = 59/124 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FSPD + L + S D ++++D+ +GH +WVL +A+ D
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD T + + H+ + G+ + N + VS D +
Sbjct: 245 THFVSSSSDKSVKVWDVGT-RTCVHTFFDHQDQVWGVKY-----NGNGSKIVSVGDDQEI 298
Query: 223 RIWD 226
++D
Sbjct: 299 HVYD 302
Score = 137 (53.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 65/286 (22%), Positives = 120/286 (41%)
Query: 138 NTQTPMFKCT-GHKNWVLCIAWSADGKH----LVSGSKAGELQCWDPQTGKPSGN-PLSG 191
N + +FK H + + +AW + K +V+GS ++ W + L G
Sbjct: 3 NQYSILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWCDERLDLQWSLEG 62
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD 251
H+ + + + P S+S D R+WD+ K + + + + + D
Sbjct: 63 HQLGVVSVD---ISHTLPIA--ASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPD 117
Query: 252 G-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSS 309
+ TG+ + ++ GK L G ++ S+A S + L +GA D +
Sbjct: 118 SQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 310 PEEMKKAALERYNK-IKGN--APER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
LE + I+ +P+ LV+ SDD + +++ + T ++GH V
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-LSGHASWVL 236
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+V F PD S+S DKS+K+W+ T V F H V+ +++
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKY 282
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ ++ N + T++GH VL+VAF PD S S D +V++WD+ T+T + H+
Sbjct: 216 IYDVQHAN-LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQ 274
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWD 178
+ V + ++ +G +VS E+ +D
Sbjct: 275 DQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 170 (64.9 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 76/310 (24%), Positives = 126/310 (40%)
Query: 104 IAGHTEAVLSVAF-SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
IAG+ + + + P+ LA + +R+ D+ + GH + + + S DG
Sbjct: 334 IAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDG 393
Query: 163 KHLVSGSKAGELQCW----DPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K + + SK E + W + Q +P GH IT IS N P + V+ S
Sbjct: 394 KWIATASKDNEARLWRWNGELQDFEPFAR-FQGHAGAITAISLSKSQ-NEP-KFLVTGST 450
Query: 219 DGDARIWDV-SLRKCVICLS-----GHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQG 271
D + W + + ++ S H + + D T S D KVW+T G
Sbjct: 451 DLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSG 510
Query: 272 KLIRELKGH--GHW-VNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYN----KI 324
+ I LKGH G W +N + + TG+ D T K +S + K LE + ++
Sbjct: 511 ETIGVLKGHKRGLWDINFYKF--DKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRV 568
Query: 325 K---GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
K P+ L G+D LW+ + K+ + H Q + + DG++ +A D
Sbjct: 569 KFFNREHPQLLSCGADGLIK-LWDYKQGEIIKS-LDNHDQRIWAMDLKNDGEYFTTADAD 626
Query: 382 KSIKLWNGTT 391
+ W T
Sbjct: 627 GKLSFWTDNT 636
Score = 155 (59.6 bits), Expect = 6.0e-16, Sum P(3) = 6.0e-16
Identities = 46/172 (26%), Positives = 78/172 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I G E + ++ +PDG LA S +R++DLN + + K + V + +
Sbjct: 56 IPGDGEVITNLTITPDGSYLAMISQSQLLRIFDLNKGS-VIKNFKLPSPVYISSVDSTSS 114
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
G G + WD + G + + L GH I +++ LN+ R S G +
Sbjct: 115 LFAFGGSDGVITVWDIENGYVT-HSLKGHGTTICSLTFHG-ELNSQDWRLASGDTMGTVK 172
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
IWD+ R+C+ L H AV V + DG ++ +G +D + ++ T K I
Sbjct: 173 IWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTI 224
Score = 128 (50.1 bits), Expect = 6.0e-16, Sum P(3) = 6.0e-16
Identities = 28/89 (31%), Positives = 50/89 (56%)
Query: 327 NAPERLVSGSDDFTMFLWE-P----AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
N P+ LV+GS D T+ W+ P ++ K + H + +N + SP+ ++ A+AS+D
Sbjct: 440 NEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYD 499
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
K K+W +G+ + V +GH ++ I F
Sbjct: 500 KLGKVWQTDSGETIGVLKGHKRGLWDINF 528
Score = 116 (45.9 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 51/184 (27%), Positives = 79/184 (42%)
Query: 238 GHTLAVTCVKWGGDG----VIYTGSQDCTIKVWE--TTQGKLIREL----KGHGHWVNSL 287
GH A+T + + TGS D TIK W+ T +++ + H +NS+
Sbjct: 425 GHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSI 484
Query: 288 ALST--EYALRTGAFDHTGK--QYSSPEEM-----KKAALERYNKIKGNAPERLVSGSDD 338
+S EY T ++D GK Q S E + K L N K + + +V+GS D
Sbjct: 485 DVSPNDEY-FATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFD--KLIVTGSGD 541
Query: 339 FTMFLWEPAVSKQPKTRMTGHQQLVNHV-YFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
T+ +W KT + GH V V +F+ + + S D IKLW+ G+ +
Sbjct: 542 KTIKVWSLLDFSCKKT-LEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKS 600
Query: 398 FRGH 401
H
Sbjct: 601 LDNH 604
Score = 103 (41.3 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 23/55 (41%), Positives = 31/55 (56%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLW--NGTTGKF--VAVFRGHVGPVYQI 408
GH ++N V S DG+W+A+AS D +LW NG F A F+GH G + I
Sbjct: 379 GHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAI 433
Score = 93 (37.8 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 39/192 (20%), Positives = 76/192 (39%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
G T A +S + +G L + + V + +L+T ++K G + + + DG +L
Sbjct: 19 GGTSASISTS---NGELLLATPLNEDVIITNLDTNEIIYKIPGDGEVITNLTITPDGSYL 75
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
S++ L+ +D G N +I+ + ++ F DG +W
Sbjct: 76 AMISQSQLLRIFDLNKGSVIKNFKLPSPVYISSV-------DSTSSLFAFGGSDGVITVW 128
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGG-----DGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
D+ L GH + + + G D + +G T+K+W+ + + I LK H
Sbjct: 129 DIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDH 188
Query: 281 GHWVNSLALSTE 292
V + +
Sbjct: 189 NTAVRGVGFDQD 200
Score = 80 (33.2 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDL-NTQT-PMFKCTGHKNWVLCI 156
RC T+ H AV V F DG SG D V +++ N +T F +
Sbjct: 180 RCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFV 239
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSG-NPL 189
+ D ++ +G L+ WD ++G+ G +P+
Sbjct: 240 SLIDDRQYFYTGGSENVLKIWDIKSGEMIGRSPI 273
Score = 40 (19.1 bits), Expect = 6.0e-16, Sum P(3) = 6.0e-16
Identities = 7/14 (50%), Positives = 12/14 (85%)
Query: 442 RLLLSGSKDSTLKV 455
+L+++GS D T+KV
Sbjct: 533 KLIVTGSGDKTIKV 546
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 170 (64.9 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 76/310 (24%), Positives = 126/310 (40%)
Query: 104 IAGHTEAVLSVAF-SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
IAG+ + + + P+ LA + +R+ D+ + GH + + + S DG
Sbjct: 334 IAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDG 393
Query: 163 KHLVSGSKAGELQCW----DPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K + + SK E + W + Q +P GH IT IS N P + V+ S
Sbjct: 394 KWIATASKDNEARLWRWNGELQDFEPFAR-FQGHAGAITAISLSKSQ-NEP-KFLVTGST 450
Query: 219 DGDARIWDV-SLRKCVICLS-----GHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQG 271
D + W + + ++ S H + + D T S D KVW+T G
Sbjct: 451 DLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSG 510
Query: 272 KLIRELKGH--GHW-VNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYN----KI 324
+ I LKGH G W +N + + TG+ D T K +S + K LE + ++
Sbjct: 511 ETIGVLKGHKRGLWDINFYKF--DKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRV 568
Query: 325 K---GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
K P+ L G+D LW+ + K+ + H Q + + DG++ +A D
Sbjct: 569 KFFNREHPQLLSCGADGLIK-LWDYKQGEIIKS-LDNHDQRIWAMDLKNDGEYFTTADAD 626
Query: 382 KSIKLWNGTT 391
+ W T
Sbjct: 627 GKLSFWTDNT 636
Score = 155 (59.6 bits), Expect = 6.0e-16, Sum P(3) = 6.0e-16
Identities = 46/172 (26%), Positives = 78/172 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I G E + ++ +PDG LA S +R++DLN + + K + V + +
Sbjct: 56 IPGDGEVITNLTITPDGSYLAMISQSQLLRIFDLNKGS-VIKNFKLPSPVYISSVDSTSS 114
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
G G + WD + G + + L GH I +++ LN+ R S G +
Sbjct: 115 LFAFGGSDGVITVWDIENGYVT-HSLKGHGTTICSLTFHG-ELNSQDWRLASGDTMGTVK 172
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
IWD+ R+C+ L H AV V + DG ++ +G +D + ++ T K I
Sbjct: 173 IWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTI 224
Score = 128 (50.1 bits), Expect = 6.0e-16, Sum P(3) = 6.0e-16
Identities = 28/89 (31%), Positives = 50/89 (56%)
Query: 327 NAPERLVSGSDDFTMFLWE-P----AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
N P+ LV+GS D T+ W+ P ++ K + H + +N + SP+ ++ A+AS+D
Sbjct: 440 NEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYD 499
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
K K+W +G+ + V +GH ++ I F
Sbjct: 500 KLGKVWQTDSGETIGVLKGHKRGLWDINF 528
Score = 116 (45.9 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 51/184 (27%), Positives = 79/184 (42%)
Query: 238 GHTLAVTCVKWGGDG----VIYTGSQDCTIKVWE--TTQGKLIREL----KGHGHWVNSL 287
GH A+T + + TGS D TIK W+ T +++ + H +NS+
Sbjct: 425 GHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSI 484
Query: 288 ALST--EYALRTGAFDHTGK--QYSSPEEM-----KKAALERYNKIKGNAPERLVSGSDD 338
+S EY T ++D GK Q S E + K L N K + + +V+GS D
Sbjct: 485 DVSPNDEY-FATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFD--KLIVTGSGD 541
Query: 339 FTMFLWEPAVSKQPKTRMTGHQQLVNHV-YFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
T+ +W KT + GH V V +F+ + + S D IKLW+ G+ +
Sbjct: 542 KTIKVWSLLDFSCKKT-LEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKS 600
Query: 398 FRGH 401
H
Sbjct: 601 LDNH 604
Score = 103 (41.3 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 23/55 (41%), Positives = 31/55 (56%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLW--NGTTGKF--VAVFRGHVGPVYQI 408
GH ++N V S DG+W+A+AS D +LW NG F A F+GH G + I
Sbjct: 379 GHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAI 433
Score = 93 (37.8 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 39/192 (20%), Positives = 76/192 (39%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
G T A +S + +G L + + V + +L+T ++K G + + + DG +L
Sbjct: 19 GGTSASISTS---NGELLLATPLNEDVIITNLDTNEIIYKIPGDGEVITNLTITPDGSYL 75
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
S++ L+ +D G N +I+ + ++ F DG +W
Sbjct: 76 AMISQSQLLRIFDLNKGSVIKNFKLPSPVYISSV-------DSTSSLFAFGGSDGVITVW 128
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGG-----DGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
D+ L GH + + + G D + +G T+K+W+ + + I LK H
Sbjct: 129 DIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDH 188
Query: 281 GHWVNSLALSTE 292
V + +
Sbjct: 189 NTAVRGVGFDQD 200
Score = 80 (33.2 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDL-NTQT-PMFKCTGHKNWVLCI 156
RC T+ H AV V F DG SG D V +++ N +T F +
Sbjct: 180 RCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFV 239
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSG-NPL 189
+ D ++ +G L+ WD ++G+ G +P+
Sbjct: 240 SLIDDRQYFYTGGSENVLKIWDIKSGEMIGRSPI 273
Score = 40 (19.1 bits), Expect = 6.0e-16, Sum P(3) = 6.0e-16
Identities = 7/14 (50%), Positives = 12/14 (85%)
Query: 442 RLLLSGSKDSTLKV 455
+L+++GS D T+KV
Sbjct: 533 KLIVTGSGDKTIKV 546
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 226 (84.6 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 60/204 (29%), Positives = 104/204 (50%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C + GHT +VL + + D R + +GS D+TVR+WD+NT + H VL + +S
Sbjct: 223 CLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 280
Query: 160 ADGKHLVSGSKAGELQCWD--PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+G +V+ SK + WD T L GH+ + + ++ ++ VSAS
Sbjct: 281 -NGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI-------VSAS 331
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D ++W S + V L+GH + C+++ D ++ +GS D TI++W+ G +R L
Sbjct: 332 GDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVL 390
Query: 278 KGHGHWVNSLALSTEYALRTGAFD 301
+GH V + + + +GA+D
Sbjct: 391 EGHEELVRCIRFDNKRIV-SGAYD 413
Score = 212 (79.7 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 75/285 (26%), Positives = 133/285 (46%)
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
D ++ SG D ++++WD ++ + TGH VLC+ + D + +V+GS ++ WD
Sbjct: 200 DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWD 257
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD------VSLRKC 232
TG+ N L H + + +HL V+ SKD +WD ++LR+
Sbjct: 258 VNTGEVL-NTLIHHNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRV 309
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
++ GH AV V + D I + S D TIKVW T+ + +R L GH + L
Sbjct: 310 LV---GHRAAVNVVDFD-DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 365
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP---ERLVSGSDDFTMFLWEPAVS 349
+ +G+ D+T + + LE + ++ +R+VSG+ D + +W+ +
Sbjct: 366 LVV-SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAA 424
Query: 350 KQPKTRMTGH--QQLVNH---VY-FSPDGQWVASASFDKSIKLWN 388
P+ + + LV H V+ D + S+S D +I +W+
Sbjct: 425 LDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 469
Score = 190 (71.9 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 56/206 (27%), Positives = 102/206 (49%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
+ +S +D +IWD S +C+ L+GHT +V C+++ + VI TGS D T++VW+ G
Sbjct: 203 KIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRVWDVNTG 261
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY---SSPEEMKKAALERYN---KIK 325
+++ L H V L S + T + D + + S+ + + L + +
Sbjct: 262 EVLNTLIHHNEAVLHLRFSNGLMV-TCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 320
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ +VS S D T+ +W + + +T + GH++ + + + + V S S D +I+
Sbjct: 321 DFDDKYIVSASGDRTIKVWSTSTCEFVRT-LNGHKRGIACLQYRD--RLVVSGSSDNTIR 377
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFE 411
LW+ G + V GH V IRF+
Sbjct: 378 LWDIECGACLRVLEGHEELVRCIRFD 403
Score = 176 (67.0 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 54/194 (27%), Positives = 92/194 (47%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
E+V+ + + R+ VN T+ H EAVL + FS +G + S D ++ +WD
Sbjct: 241 ERVI-VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTC-SKDRSIAVWD 297
Query: 137 LNTQTPMFK---CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK 193
+ + T + GH+ V + + D K++VS S ++ W T + L+GHK
Sbjct: 298 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-FVRTLNGHK 354
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV 253
+ I + + R VS S D R+WD+ C+ L GH V C+++ +
Sbjct: 355 RGIACLQYRD-------RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI 407
Query: 254 IYTGSQDCTIKVWE 267
+ +G+ D IKVW+
Sbjct: 408 V-SGAYDGKIKVWD 420
Score = 162 (62.1 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 58/237 (24%), Positives = 115/237 (48%)
Query: 235 CLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
C S ++ V C+++ D +I +G +D +IK+W+ + + ++ L GH V L E
Sbjct: 186 CRSENSKGVYCLQYDDDKII-SGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD-ERV 243
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN---APERLVSGSDDFTMFLWEPAVSKQ 351
+ TG+ D T + + L +N+ + + +V+ S D ++ +W+ A +
Sbjct: 244 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATD 303
Query: 352 PKTR--MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
R + GH+ VN V F D +++ SAS D++IK+W+ +T +FV GH + ++
Sbjct: 304 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 361
Query: 410 F-ELIYCFRYPSNFYCVVDMSC--CMSLYSWSA--------DSRLLLSGSKDSTLKV 455
+ + + N + D+ C C+ + D++ ++SG+ D +KV
Sbjct: 362 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKV 418
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 226 (84.6 bits), Expect = 7.5e-16, P = 7.5e-16
Identities = 77/285 (27%), Positives = 139/285 (48%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT +VL + + D + + SGS D+TVR+WD+NT + H VL + +
Sbjct: 241 QCVKTLMGHTGSVLCLQY--DDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF 298
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSG----NPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ +G +V+ SK + WD + PS L GH+ + + ++ ++ V
Sbjct: 299 N-NGM-MVTCSKDRSIAVWDMTS--PSEITLRRVLVGHRAAVNVVDFDEKYI-------V 347
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLI 274
SAS D ++W S + V L+GH + C+++ D ++ +GS D +I++W+ G +
Sbjct: 348 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNSIRLWDIECGACL 406
Query: 275 RELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMK-KAA---------LERYNKI 324
R L+GH V + T+ + +GA+D K + + +AA +E ++
Sbjct: 407 RVLEGHEELVRCIRFDTKRIV-SGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRV 465
Query: 325 -KGNAPE-RLVSGSDDFTMFLWE--PAVSKQPKTRMTGHQQLVNH 365
+ E ++VS S D T+ +W+ + KT T L+ H
Sbjct: 466 FRLQFDEFQIVSSSHDDTILIWDFLNFTPNENKTGRTPSPALMEH 510
Score = 206 (77.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 75/285 (26%), Positives = 129/285 (45%)
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
DG+ + SG D T+++WD + GH VLC+ + D K ++SGS ++ WD
Sbjct: 220 DGK-IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQY--DDKVIISGSSDSTVRVWD 276
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD------VSLRKC 232
TG+ N L H + + +HL V+ SKD +WD ++LR+
Sbjct: 277 VNTGEMV-NTLIHHCEAV-------LHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRV 328
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
++ GH AV V + + I + S D TIKVW T+ + +R L GH + L
Sbjct: 329 LV---GHRAAVNVVDFD-EKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 384
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA---PERLVSGSDDFTMFLWEPAVS 349
+ +G+ D++ + + LE + ++ +R+VSG+ D + +W+ +
Sbjct: 385 LVV-SGSSDNSIRLWDIECGACLRVLEGHEELVRCIRFDTKRIVSGAYDGKIKVWDLVAA 443
Query: 350 KQPKTRMTGH--QQLVNH---VY-FSPDGQWVASASFDKSIKLWN 388
P+ LV H V+ D + S+S D +I +W+
Sbjct: 444 LDPRAASNTLCLNTLVEHTGRVFRLQFDEFQIVSSSHDDTILIWD 488
Score = 196 (74.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 60/206 (29%), Positives = 104/206 (50%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
+ VS +D +IWD + +CV L GHT +V C+++ D VI +GS D T++VW+ G
Sbjct: 222 KIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYD-DKVIISGSSDSTVRVWDVNTG 280
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY--SSPEEMKKAALERYNKIKGNA- 328
+++ L H V L + + T + D + + +SP E+ + ++ N
Sbjct: 281 EMVNTLIHHCEAVLHLRFNNGMMV-TCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVV 339
Query: 329 --PER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
E+ +VS S D T+ +W + + +T + GH++ + + + + V S S D SI+
Sbjct: 340 DFDEKYIVSASGDRTIKVWSTSTCEFVRT-LNGHKRGIACLQYRD--RLVVSGSSDNSIR 396
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFE 411
LW+ G + V GH V IRF+
Sbjct: 397 LWDIECGACLRVLEGHEELVRCIRFD 422
Score = 185 (70.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 69/244 (28%), Positives = 116/244 (47%)
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
V C+ + DGK +VSG + ++ WD +T L GH + + ++ +
Sbjct: 213 VYCLQYD-DGK-IVSGLRDNTIKIWD-RTDLQCVKTLMGHTGSVLCLQYDD-------KV 262
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGK 272
+S S D R+WDV+ + V L H AV +++ +G++ T S+D +I VW+ T
Sbjct: 263 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFN-NGMMVTCSKDRSIAVWDMTSPS 321
Query: 273 LI---RELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA- 328
I R L GH VN + +Y + D T K +S+ L + + G A
Sbjct: 322 EITLRRVLVGHRAAVNVVDFDEKYIVSASG-DRTIKVWSTSTCEFVRTLNGHKR--GIAC 378
Query: 329 ---PERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+RLV SGS D ++ LW+ + + GH++LV + F D + + S ++D I
Sbjct: 379 LQYRDRLVVSGSSDNSIRLWDIECGACLRV-LEGHEELVRCIRF--DTKRIVSGAYDGKI 435
Query: 385 KLWN 388
K+W+
Sbjct: 436 KVWD 439
Score = 173 (66.0 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 62/244 (25%), Positives = 120/244 (49%)
Query: 229 LRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLA 288
LR+ + C S ++ V C+++ DG I +G +D TIK+W+ T + ++ L GH V L
Sbjct: 200 LRR-INCRSENSKGVYCLQYD-DGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQ 257
Query: 289 LSTEYALRTGAFDHTGKQYS-SPEEMKKAAL---ERYNKIKGNAPERLVSGSDDFTMFLW 344
+ + +G+ D T + + + EM + E ++ N +V+ S D ++ +W
Sbjct: 258 YDDKVII-SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNG-MMVTCSKDRSIAVW 315
Query: 345 EPAVSKQPKTR--MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
+ + R + GH+ VN V F D +++ SAS D++IK+W+ +T +FV GH
Sbjct: 316 DMTSPSEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWSTSTCEFVRTLNGHK 373
Query: 403 GPVYQIRF-ELIYCFRYPSNFYCVVDMSC--CMSLYSWSA--------DSRLLLSGSKDS 451
+ +++ + + N + D+ C C+ + D++ ++SG+ D
Sbjct: 374 RGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRFDTKRIVSGAYDG 433
Query: 452 TLKV 455
+KV
Sbjct: 434 KIKV 437
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 226 (84.6 bits), Expect = 7.5e-16, P = 7.5e-16
Identities = 60/204 (29%), Positives = 104/204 (50%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C + GHT +VL + + D R + +GS D+TVR+WD+NT + H VL + +S
Sbjct: 240 CLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 297
Query: 160 ADGKHLVSGSKAGELQCWD--PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+G +V+ SK + WD T L GH+ + + ++ ++ VSAS
Sbjct: 298 -NGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI-------VSAS 348
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D ++W S + V L+GH + C+++ D ++ +GS D TI++W+ G +R L
Sbjct: 349 GDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVL 407
Query: 278 KGHGHWVNSLALSTEYALRTGAFD 301
+GH V + + + +GA+D
Sbjct: 408 EGHEELVRCIRFDNKRIV-SGAYD 430
Score = 213 (80.0 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 75/285 (26%), Positives = 132/285 (46%)
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
D ++ SG D ++++WD + + TGH VLC+ + D + +V+GS ++ WD
Sbjct: 217 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWD 274
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD------VSLRKC 232
TG+ N L H + + +HL V+ SKD +WD ++LR+
Sbjct: 275 VNTGEVL-NTLIHHNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRV 326
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
++ GH AV V + D I + S D TIKVW T+ + +R L GH + L
Sbjct: 327 LV---GHRAAVNVVDFD-DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 382
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP---ERLVSGSDDFTMFLWEPAVS 349
+ +G+ D+T + + LE + ++ +R+VSG+ D + +W+ +
Sbjct: 383 LVV-SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAA 441
Query: 350 KQPKTRMTGH--QQLVNH---VY-FSPDGQWVASASFDKSIKLWN 388
P+ + + LV H V+ D + S+S D +I +W+
Sbjct: 442 LDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 486
Score = 187 (70.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 55/206 (26%), Positives = 102/206 (49%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
+ +S +D +IWD + +C+ L+GHT +V C+++ + VI TGS D T++VW+ G
Sbjct: 220 KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRVWDVNTG 278
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY---SSPEEMKKAALERYN---KIK 325
+++ L H V L S + T + D + + S+ + + L + +
Sbjct: 279 EVLNTLIHHNEAVLHLRFSNGLMV-TCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 337
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ +VS S D T+ +W + + +T + GH++ + + + + V S S D +I+
Sbjct: 338 DFDDKYIVSASGDRTIKVWSTSTCEFVRT-LNGHKRGIACLQYRD--RLVVSGSSDNTIR 394
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFE 411
LW+ G + V GH V IRF+
Sbjct: 395 LWDIECGACLRVLEGHEELVRCIRFD 420
Score = 176 (67.0 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 54/194 (27%), Positives = 92/194 (47%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
E+V+ + + R+ VN T+ H EAVL + FS +G + S D ++ +WD
Sbjct: 258 ERVI-VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTC-SKDRSIAVWD 314
Query: 137 LNTQTPMFK---CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK 193
+ + T + GH+ V + + D K++VS S ++ W T + L+GHK
Sbjct: 315 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-FVRTLNGHK 371
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV 253
+ I + + R VS S D R+WD+ C+ L GH V C+++ +
Sbjct: 372 RGIACLQYRD-------RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI 424
Query: 254 IYTGSQDCTIKVWE 267
+ +G+ D IKVW+
Sbjct: 425 V-SGAYDGKIKVWD 437
Score = 162 (62.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 58/237 (24%), Positives = 115/237 (48%)
Query: 235 CLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
C S ++ V C+++ + +I +G +D +IK+W+ T + ++ L GH V L E
Sbjct: 203 CRSENSKGVYCLQYDDEKII-SGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERV 260
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN---APERLVSGSDDFTMFLWEPAVSKQ 351
+ TG+ D T + + L +N+ + + +V+ S D ++ +W+ A +
Sbjct: 261 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATD 320
Query: 352 PKTR--MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
R + GH+ VN V F D +++ SAS D++IK+W+ +T +FV GH + ++
Sbjct: 321 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 378
Query: 410 F-ELIYCFRYPSNFYCVVDMSC--CMSLYSWSA--------DSRLLLSGSKDSTLKV 455
+ + + N + D+ C C+ + D++ ++SG+ D +KV
Sbjct: 379 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKV 435
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 226 (84.6 bits), Expect = 7.5e-16, P = 7.5e-16
Identities = 60/204 (29%), Positives = 104/204 (50%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C + GHT +VL + + D R + +GS D+TVR+WD+NT + H VL + +S
Sbjct: 240 CLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 297
Query: 160 ADGKHLVSGSKAGELQCWD--PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+G +V+ SK + WD T L GH+ + + ++ ++ VSAS
Sbjct: 298 -NGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI-------VSAS 348
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D ++W S + V L+GH + C+++ D ++ +GS D TI++W+ G +R L
Sbjct: 349 GDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVL 407
Query: 278 KGHGHWVNSLALSTEYALRTGAFD 301
+GH V + + + +GA+D
Sbjct: 408 EGHEELVRCIRFDNKRIV-SGAYD 430
Score = 213 (80.0 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 75/285 (26%), Positives = 132/285 (46%)
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
D ++ SG D ++++WD + + TGH VLC+ + D + +V+GS ++ WD
Sbjct: 217 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWD 274
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD------VSLRKC 232
TG+ N L H + + +HL V+ SKD +WD ++LR+
Sbjct: 275 VNTGEVL-NTLIHHNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRV 326
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
++ GH AV V + D I + S D TIKVW T+ + +R L GH + L
Sbjct: 327 LV---GHRAAVNVVDFD-DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 382
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP---ERLVSGSDDFTMFLWEPAVS 349
+ +G+ D+T + + LE + ++ +R+VSG+ D + +W+ +
Sbjct: 383 LVV-SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAA 441
Query: 350 KQPKTRMTGH--QQLVNH---VY-FSPDGQWVASASFDKSIKLWN 388
P+ + + LV H V+ D + S+S D +I +W+
Sbjct: 442 LDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 486
Score = 187 (70.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 55/206 (26%), Positives = 102/206 (49%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
+ +S +D +IWD + +C+ L+GHT +V C+++ + VI TGS D T++VW+ G
Sbjct: 220 KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRVWDVNTG 278
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY---SSPEEMKKAALERYN---KIK 325
+++ L H V L S + T + D + + S+ + + L + +
Sbjct: 279 EVLNTLIHHNEAVLHLRFSNGLMV-TCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 337
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ +VS S D T+ +W + + +T + GH++ + + + + V S S D +I+
Sbjct: 338 DFDDKYIVSASGDRTIKVWSTSTCEFVRT-LNGHKRGIACLQYRD--RLVVSGSSDNTIR 394
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFE 411
LW+ G + V GH V IRF+
Sbjct: 395 LWDIECGACLRVLEGHEELVRCIRFD 420
Score = 176 (67.0 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 54/194 (27%), Positives = 92/194 (47%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
E+V+ + + R+ VN T+ H EAVL + FS +G + S D ++ +WD
Sbjct: 258 ERVI-VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTC-SKDRSIAVWD 314
Query: 137 LNTQTPMFK---CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK 193
+ + T + GH+ V + + D K++VS S ++ W T + L+GHK
Sbjct: 315 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-FVRTLNGHK 371
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV 253
+ I + + R VS S D R+WD+ C+ L GH V C+++ +
Sbjct: 372 RGIACLQYRD-------RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI 424
Query: 254 IYTGSQDCTIKVWE 267
+ +G+ D IKVW+
Sbjct: 425 V-SGAYDGKIKVWD 437
Score = 162 (62.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 58/237 (24%), Positives = 115/237 (48%)
Query: 235 CLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
C S ++ V C+++ + +I +G +D +IK+W+ T + ++ L GH V L E
Sbjct: 203 CRSENSKGVYCLQYDDEKII-SGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERV 260
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN---APERLVSGSDDFTMFLWEPAVSKQ 351
+ TG+ D T + + L +N+ + + +V+ S D ++ +W+ A +
Sbjct: 261 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATD 320
Query: 352 PKTR--MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
R + GH+ VN V F D +++ SAS D++IK+W+ +T +FV GH + ++
Sbjct: 321 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 378
Query: 410 F-ELIYCFRYPSNFYCVVDMSC--CMSLYSWSA--------DSRLLLSGSKDSTLKV 455
+ + + N + D+ C C+ + D++ ++SG+ D +KV
Sbjct: 379 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKV 435
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 220 (82.5 bits), Expect = 7.6e-16, Sum P(2) = 7.6e-16
Identities = 87/352 (24%), Positives = 152/352 (43%)
Query: 58 ISDHELLVPLGSYLE--KHKVSVEKV-LSIVYQPQAVFRIRP----VNRCSATIAGHTEA 110
+ ++E L L S E K K+ E+ L V Q R+ V + T+ GH
Sbjct: 6 LHENETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGNK 65
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
VL + + D R++ S S D V +WD T T WV+ A++ G + G
Sbjct: 66 VLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGL 125
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWI---TGISWEPVHLNAPCRRFVSASKDGDARIWDV 227
+ + P T + N ++ KK + T N+ ++ ++AS DG +WDV
Sbjct: 126 DNKCSVY-PLTFDKNEN-MAAKKKSVAMHTNYLSACSFTNSDMQQILTASGDGTCALWDV 183
Query: 228 SLRKCVICLSGHTLAVTCVKWGGD---GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
+ + GH V C+ +G D VW+ G+ I+ + H +
Sbjct: 184 ESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQAFETHESDI 243
Query: 285 NSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG------NAPERLV-SGS 336
NS+ + A +G+ D T + Y + + A + + I G + RL+ +G
Sbjct: 244 NSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGY 303
Query: 337 DDFTMFLWEPAVSKQPKTRMT-GHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
+D+T+ +W+ V K + + GH+ V+ + SPDG S S+D ++++W
Sbjct: 304 NDYTINVWD--VLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353
Score = 147 (56.8 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 63/277 (22%), Positives = 115/277 (41%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GH N VLC+ W D + +VS S+ G++ WD T + ++ W+ ++ P
Sbjct: 61 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKE-HAVTMPCTWVMACAYAPSGCA 119
Query: 208 APCRRF---VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTI 263
C S + +++ +K + + + L+ C D I T S D T
Sbjct: 120 IACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSA-CSFTNSDMQQILTASGDGTC 178
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALS---TEYALRTGAFDHTGKQYSSPEEMKKAALER 320
+W+ G+L++ GHG V L L+ T +G D + A E
Sbjct: 179 ALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQAFET 238
Query: 321 Y----NKIKGN-APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSPDG 372
+ N ++ + + SGSDD T L++ ++ + + ++ + V FS G
Sbjct: 239 HESDINSVRYYPSGDAFASGSDDATCRLYDLRADRE--VAIYSKESIIFGASSVDFSLSG 296
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ + + D +I +W+ G V++ GH V +R
Sbjct: 297 RLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLR 333
Score = 37 (18.1 bits), Expect = 7.6e-16, Sum P(2) = 7.6e-16
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 438 SADSRLLLSGSKDSTLKV 455
S D SGS D TL+V
Sbjct: 335 SPDGTAFCSGSWDHTLRV 352
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 226 (84.6 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 60/204 (29%), Positives = 104/204 (50%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C + GHT +VL + + D R + +GS D+TVR+WD+NT + H VL + +S
Sbjct: 245 CLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 302
Query: 160 ADGKHLVSGSKAGELQCWD--PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+G +V+ SK + WD T L GH+ + + ++ ++ VSAS
Sbjct: 303 -NGL-MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYI-------VSAS 353
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D ++W S + V L+GH + C+++ D ++ +GS D TI++W+ G +R L
Sbjct: 354 GDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVL 412
Query: 278 KGHGHWVNSLALSTEYALRTGAFD 301
+GH V + + + +GA+D
Sbjct: 413 EGHEELVRCIRFDNKRIV-SGAYD 435
Score = 213 (80.0 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 75/285 (26%), Positives = 132/285 (46%)
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
D ++ SG D ++++WD + + TGH VLC+ + D + +V+GS ++ WD
Sbjct: 222 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWD 279
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD------VSLRKC 232
TG+ N L H + + +HL V+ SKD +WD ++LR+
Sbjct: 280 VNTGEVL-NTLIHHNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRV 331
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
++ GH AV V + D I + S D TIKVW T+ + +R L GH + L
Sbjct: 332 LV---GHRAAVNVVDFD-DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 387
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP---ERLVSGSDDFTMFLWEPAVS 349
+ +G+ D+T + + LE + ++ +R+VSG+ D + +W+ +
Sbjct: 388 LVV-SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAA 446
Query: 350 KQPKTRMTGH--QQLVNH---VY-FSPDGQWVASASFDKSIKLWN 388
P+ + + LV H V+ D + S+S D +I +W+
Sbjct: 447 LDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 491
Score = 194 (73.4 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 56/206 (27%), Positives = 104/206 (50%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
+ +S +D +IWD + +C+ L+GHT +V C+++ + VI TGS D T++VW+ G
Sbjct: 225 KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRVWDVNTG 283
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY--SSPEEMKKAALERYNKIKGNAP 329
+++ L H V L S + T + D + + +SP ++ + ++ N
Sbjct: 284 EVLNTLIHHNEAVLHLRFSNGLMV-TCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 342
Query: 330 E----RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ +VS S D T+ +W + + +T + GH++ + + + + V S S D +I+
Sbjct: 343 DFDDKYIVSASGDRTIKVWSTSTCEFVRT-LNGHKRGIACLQYRD--RLVVSGSSDNTIR 399
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFE 411
LW+ G + V GH V IRF+
Sbjct: 400 LWDIECGACLRVLEGHEELVRCIRFD 425
Score = 176 (67.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 54/194 (27%), Positives = 92/194 (47%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
E+V+ + + R+ VN T+ H EAVL + FS +G + S D ++ +WD
Sbjct: 263 ERVI-VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTC-SKDRSIAVWD 319
Query: 137 LNTQTPMFK---CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK 193
+ + T + GH+ V + + D K++VS S ++ W T + L+GHK
Sbjct: 320 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-FVRTLNGHK 376
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV 253
+ I + + R VS S D R+WD+ C+ L GH V C+++ +
Sbjct: 377 RGIACLQYRD-------RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI 429
Query: 254 IYTGSQDCTIKVWE 267
+ +G+ D IKVW+
Sbjct: 430 V-SGAYDGKIKVWD 442
Score = 160 (61.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 58/237 (24%), Positives = 114/237 (48%)
Query: 235 CLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
C S ++ V C+++ + +I +G +D +IK+W+ T + ++ L GH V L E
Sbjct: 208 CRSENSKGVYCLQYDDEKII-SGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERV 265
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN---APERLVSGSDDFTMFLWEPAVSKQ 351
+ TG+ D T + + L +N+ + + +V+ S D ++ +W+ A
Sbjct: 266 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTD 325
Query: 352 PKTR--MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
R + GH+ VN V F D +++ SAS D++IK+W+ +T +FV GH + ++
Sbjct: 326 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 383
Query: 410 F-ELIYCFRYPSNFYCVVDMSC--CMSLYSWSA--------DSRLLLSGSKDSTLKV 455
+ + + N + D+ C C+ + D++ ++SG+ D +KV
Sbjct: 384 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKV 440
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 215 (80.7 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 51/158 (32%), Positives = 84/158 (53%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ +D Q +G LSGH W+ +++ P + FVS+S D ++WDV R
Sbjct: 211 DGYIKIYDVQHANLAGT-LSGHASWVLNVAFCPDDTH-----FVSSSSDKSVKVWDVGTR 264
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
CV H V VK+ G+G I + D I +++
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 181 (68.8 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 53/189 (28%), Positives = 88/189 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT--QTPMFKCTGHKNWVLCIAWSA 160
++ GH V+SV S AS S D +RLWDL Q W L A+S
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTL--AFSP 116
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
D ++L +G+ G++ + ++GK + L K+I I++ P + S + DG
Sbjct: 117 DSQYLATGTHVGKVNIFGVESGKKEYS-LDTRGKFILSIAYSP-----DGKYLASGAIDG 170
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
I+D++ K + L GH + + + + D ++ T S D IK+++ L L G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 280 HGHWVNSLA 288
H WV ++A
Sbjct: 231 HASWVLNVA 239
Score = 177 (67.4 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 52/164 (31%), Positives = 84/164 (51%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AG +A ++AFSPD + LA+G+ V ++ + + + ++L IA+S DGK+
Sbjct: 104 AGPVDA-WTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 162
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L SG+ G + +D TGK + L GH I +++ P + V+AS DG +I
Sbjct: 163 LASGAIDGIINIFDIATGKLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKI 216
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWE 267
+DV LSGH V V + D + + S D ++KVW+
Sbjct: 217 YDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Score = 147 (56.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FSPD + L + S D ++++D+ +GH +WVL +A+ D
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD T + + H+ + G+ + N + VS D +
Sbjct: 245 THFVSSSSDKSVKVWDVGT-RTCVHTFFDHQDQVWGVKY-----NGNGSKIVSVGDDQEI 298
Query: 223 RIWD 226
I+D
Sbjct: 299 HIYD 302
Score = 145 (56.1 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 66/286 (23%), Positives = 122/286 (42%)
Query: 138 NTQTPMFKCT-GHKNWVLCIAWSADGKH----LVSGSKAGELQCWDPQTGKPSGN-PLSG 191
N + +FK H + + +AW ++ K +V+GS ++ W + K L G
Sbjct: 3 NQYSILFKQEQAHDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEG 62
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD 251
H+ + + + P S+S D R+WD+ K + + + + + D
Sbjct: 63 HQLGVVSVD---ISHTLPIA--ASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPD 117
Query: 252 G-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSS 309
+ TG+ + ++ GK L G ++ S+A S + L +GA D +
Sbjct: 118 SQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 310 PEEMKKAALERYNK-IKGN--APER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
LE + I+ +P+ LV+ SDD + +++ + T ++GH V
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-LSGHASWVL 236
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+V F PD S+S DKS+K+W+ T V F H V+ +++
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKY 282
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ ++ N + T++GH VL+VAF PD S S D +V++WD+ T+T + H+
Sbjct: 216 IYDVQHAN-LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQ 274
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWD 178
+ V + ++ +G +VS E+ +D
Sbjct: 275 DQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 215 (80.7 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 51/158 (32%), Positives = 84/158 (53%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ +D Q +G LSGH W+ +++ P + FVS+S D ++WDV R
Sbjct: 211 DGYIKIYDVQHANLAGT-LSGHASWVLNVAFCPDDTH-----FVSSSSDKSVKVWDVGTR 264
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
C+ H V VK+ G+G I + D I V++
Sbjct: 265 TCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 188 (71.2 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 55/189 (29%), Positives = 90/189 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKN-WVLCIAWSA 160
++ GH V+SV S AS S D +RLWDL M G + W L A+S
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTL--AFSP 116
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
D +HL +G+ G++ + ++GK + L K+I I++ P + S + DG
Sbjct: 117 DSQHLATGTHMGKVNIFGVESGKKEYS-LDTRGKFILSIAYSP-----DGKYLASGAIDG 170
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
I+D++ K + L GH + + + + D ++ T S D IK+++ L L G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 280 HGHWVNSLA 288
H WV ++A
Sbjct: 231 HASWVLNVA 239
Score = 178 (67.7 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 52/164 (31%), Positives = 84/164 (51%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AG +A ++AFSPD + LA+G+ V ++ + + + ++L IA+S DGK+
Sbjct: 104 AGPVDA-WTLAFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 162
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L SG+ G + +D TGK + L GH I +++ P + V+AS DG +I
Sbjct: 163 LASGAIDGIINIFDIATGKLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKI 216
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWE 267
+DV LSGH V V + D + + S D ++KVW+
Sbjct: 217 YDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Score = 145 (56.1 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 33/124 (26%), Positives = 59/124 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FSPD + L + S D ++++D+ +GH +WVL +A+ D
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD T + + H+ + G+ + N + VS D +
Sbjct: 245 THFVSSSSDKSVKVWDVGT-RTCIHTFFDHQDQVWGVKY-----NGNGSKIVSVGDDQEI 298
Query: 223 RIWD 226
++D
Sbjct: 299 HVYD 302
Score = 137 (53.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 64/286 (22%), Positives = 121/286 (42%)
Query: 138 NTQTPMFKCT-GHKNWVLCIAWSADGKH----LVSGSKAGELQCWDPQTGKPSGN-PLSG 191
N + +FK H + + +AW + K +V+GS ++ W + + L G
Sbjct: 3 NQYSILFKQEQAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEG 62
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD 251
H+ + + + P S+S D R+WD+ K + + + + + D
Sbjct: 63 HQLGVVSVD---ISHTLPIA--ASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPD 117
Query: 252 GV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSS 309
+ TG+ + ++ GK L G ++ S+A S + L +GA D +
Sbjct: 118 SQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 310 PEEMKKAALERYNK-IKGN--APER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
LE + I+ +P+ LV+ SDD + +++ + T ++GH V
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-LSGHASWVL 236
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+V F PD S+S DKS+K+W+ T + F H V+ +++
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKY 282
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ ++ N + T++GH VL+VAF PD S S D +V++WD+ T+T + H+
Sbjct: 216 IYDVQHAN-LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQ 274
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWD 178
+ V + ++ +G +VS E+ +D
Sbjct: 275 DQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 215 (80.7 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 51/158 (32%), Positives = 84/158 (53%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ +D Q +G LSGH W+ +++ P + FVS+S D ++WDV R
Sbjct: 211 DGYIKIYDVQHANLAGT-LSGHASWVLNVAFCPDDTH-----FVSSSSDKSVKVWDVGTR 264
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
CV H V VK+ G+G I + D I +++
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 181 (68.8 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 53/189 (28%), Positives = 88/189 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT--QTPMFKCTGHKNWVLCIAWSA 160
++ GH V+SV S AS S D +RLWDL Q W L A+S
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTL--AFSP 116
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
D ++L +G+ G++ + ++GK + L K+I I++ P + S + DG
Sbjct: 117 DSQYLATGTHVGKVNIFGVESGKKEYS-LDTRGKFILSIAYSP-----DGKYLASGAIDG 170
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
I+D++ K + L GH + + + + D ++ T S D IK+++ L L G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 280 HGHWVNSLA 288
H WV ++A
Sbjct: 231 HASWVLNVA 239
Score = 177 (67.4 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 52/164 (31%), Positives = 84/164 (51%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AG +A ++AFSPD + LA+G+ V ++ + + + ++L IA+S DGK+
Sbjct: 104 AGPVDA-WTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 162
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L SG+ G + +D TGK + L GH I +++ P + V+AS DG +I
Sbjct: 163 LASGAIDGIINIFDIATGKLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKI 216
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWE 267
+DV LSGH V V + D + + S D ++KVW+
Sbjct: 217 YDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Score = 147 (56.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FSPD + L + S D ++++D+ +GH +WVL +A+ D
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD T + + H+ + G+ + N + VS D +
Sbjct: 245 THFVSSSSDKSVKVWDVGT-RTCVHTFFDHQDQVWGVKY-----NGNGSKIVSVGDDQEI 298
Query: 223 RIWD 226
I+D
Sbjct: 299 HIYD 302
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 62/274 (22%), Positives = 116/274 (42%)
Query: 149 HKNWVLCIAWSADGKH----LVSGSKAGELQCWDPQTGKPSGN-PLSGHKKWITGISWEP 203
H + + +AW + K +V+GS ++ W + + L GH+ + +
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVD--- 71
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
+ P S+S D R+WD+ K + + + + + D + TG+
Sbjct: 72 ISHTLPIA--ASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGK 129
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERY 321
+ ++ GK L G ++ S+A S + L +GA D + LE +
Sbjct: 130 VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Query: 322 NK-IKGN--APER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVA 376
I+ +P+ LV+ SDD + +++ + T ++GH V +V F PD
Sbjct: 190 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-LSGHASWVLNVAFCPDDTHFV 248
Query: 377 SASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
S+S DKS+K+W+ T V F H V+ +++
Sbjct: 249 SSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKY 282
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ ++ N + T++GH VL+VAF PD S S D +V++WD+ T+T + H+
Sbjct: 216 IYDVQHAN-LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQ 274
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWD 178
+ V + ++ +G +VS E+ +D
Sbjct: 275 DQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 215 (80.7 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 51/158 (32%), Positives = 84/158 (53%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ +D Q +G LSGH W+ +++ P + FVS+S D ++WDV R
Sbjct: 211 DGYIKIYDVQHANLAGT-LSGHASWVLNVAFCPDDTH-----FVSSSSDKSVKVWDVGTR 264
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
C+ H V VK+ G+G I + D I V++
Sbjct: 265 TCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 182 (69.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 54/189 (28%), Positives = 90/189 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKN-WVLCIAWSA 160
++ GH V+SV S AS S D +RLWDL M G + W L A+S
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTL--AFSP 116
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
D ++L +G+ G++ + ++GK + L K+I I++ P + S + DG
Sbjct: 117 DSQYLATGTHMGKVNIFGVESGKKEYS-LDTRGKFILSIAYSP-----DGKYLASGAIDG 170
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
I+D++ K + L GH + + + + D ++ T S D IK+++ L L G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 280 HGHWVNSLA 288
H WV ++A
Sbjct: 231 HASWVLNVA 239
Score = 177 (67.4 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 52/164 (31%), Positives = 84/164 (51%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AG +A ++AFSPD + LA+G+ V ++ + + + ++L IA+S DGK+
Sbjct: 104 AGPVDA-WTLAFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 162
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L SG+ G + +D TGK + L GH I +++ P + V+AS DG +I
Sbjct: 163 LASGAIDGIINIFDIATGKLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKI 216
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWE 267
+DV LSGH V V + D + + S D ++KVW+
Sbjct: 217 YDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Score = 145 (56.1 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 33/124 (26%), Positives = 59/124 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FSPD + L + S D ++++D+ +GH +WVL +A+ D
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD T + + H+ + G+ + N + VS D +
Sbjct: 245 THFVSSSSDKSVKVWDVGT-RTCIHTFFDHQDQVWGVKY-----NGNGSKIVSVGDDQEI 298
Query: 223 RIWD 226
++D
Sbjct: 299 HVYD 302
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 64/286 (22%), Positives = 121/286 (42%)
Query: 138 NTQTPMFKCT-GHKNWVLCIAWSADGKH----LVSGSKAGELQCWDPQTGKPSGN-PLSG 191
N + +FK H + + +AW + K +V+GS ++ W + + L G
Sbjct: 3 NQYSILFKQEQAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEG 62
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD 251
H+ + + + P S+S D R+WD+ K + + + + + D
Sbjct: 63 HQLGVVSVD---ISHTLPIA--ASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPD 117
Query: 252 G-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSS 309
+ TG+ + ++ GK L G ++ S+A S + L +GA D +
Sbjct: 118 SQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 310 PEEMKKAALERYNK-IKGN--APER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
LE + I+ +P+ LV+ SDD + +++ + T ++GH V
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-LSGHASWVL 236
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+V F PD S+S DKS+K+W+ T + F H V+ +++
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKY 282
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ ++ N + T++GH VL+VAF PD S S D +V++WD+ T+T + H+
Sbjct: 216 IYDVQHAN-LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQ 274
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWD 178
+ V + ++ +G +VS E+ +D
Sbjct: 275 DQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 226 (84.6 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 60/204 (29%), Positives = 104/204 (50%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C + GHT +VL + + D R + +GS D+TVR+WD+NT + H VL + +S
Sbjct: 257 CLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 314
Query: 160 ADGKHLVSGSKAGELQCWD--PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+G +V+ SK + WD T L GH+ + + ++ ++ VSAS
Sbjct: 315 -NGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI-------VSAS 365
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D ++W S + V L+GH + C+++ D ++ +GS D TI++W+ G +R L
Sbjct: 366 GDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVL 424
Query: 278 KGHGHWVNSLALSTEYALRTGAFD 301
+GH V + + + +GA+D
Sbjct: 425 EGHEELVRCIRFDNKRIV-SGAYD 447
Score = 212 (79.7 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 75/285 (26%), Positives = 133/285 (46%)
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
D ++ SG D ++++WD ++ + TGH VLC+ + D + +V+GS ++ WD
Sbjct: 234 DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWD 291
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD------VSLRKC 232
TG+ N L H + + +HL V+ SKD +WD ++LR+
Sbjct: 292 VNTGEVL-NTLIHHNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRV 343
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
++ GH AV V + D I + S D TIKVW T+ + +R L GH + L
Sbjct: 344 LV---GHRAAVNVVDFD-DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 399
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP---ERLVSGSDDFTMFLWEPAVS 349
+ +G+ D+T + + LE + ++ +R+VSG+ D + +W+ +
Sbjct: 400 LVV-SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAA 458
Query: 350 KQPKTRMTGH--QQLVNH---VY-FSPDGQWVASASFDKSIKLWN 388
P+ + + LV H V+ D + S+S D +I +W+
Sbjct: 459 LDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 503
Score = 190 (71.9 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 56/206 (27%), Positives = 102/206 (49%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
+ +S +D +IWD S +C+ L+GHT +V C+++ + VI TGS D T++VW+ G
Sbjct: 237 KIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRVWDVNTG 295
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY---SSPEEMKKAALERYN---KIK 325
+++ L H V L S + T + D + + S+ + + L + +
Sbjct: 296 EVLNTLIHHNEAVLHLRFSNGLMV-TCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 354
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ +VS S D T+ +W + + +T + GH++ + + + + V S S D +I+
Sbjct: 355 DFDDKYIVSASGDRTIKVWSTSTCEFVRT-LNGHKRGIACLQYRD--RLVVSGSSDNTIR 411
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFE 411
LW+ G + V GH V IRF+
Sbjct: 412 LWDIECGACLRVLEGHEELVRCIRFD 437
Score = 176 (67.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 54/194 (27%), Positives = 92/194 (47%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
E+V+ + + R+ VN T+ H EAVL + FS +G + S D ++ +WD
Sbjct: 275 ERVI-VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTC-SKDRSIAVWD 331
Query: 137 LNTQTPMFK---CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK 193
+ + T + GH+ V + + D K++VS S ++ W T + L+GHK
Sbjct: 332 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-FVRTLNGHK 388
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV 253
+ I + + R VS S D R+WD+ C+ L GH V C+++ +
Sbjct: 389 RGIACLQYRD-------RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI 441
Query: 254 IYTGSQDCTIKVWE 267
+ +G+ D IKVW+
Sbjct: 442 V-SGAYDGKIKVWD 454
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 58/237 (24%), Positives = 115/237 (48%)
Query: 235 CLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
C S ++ V C+++ D +I +G +D +IK+W+ + + ++ L GH V L E
Sbjct: 220 CRSENSKGVYCLQYDDDKII-SGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD-ERV 277
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN---APERLVSGSDDFTMFLWEPAVSKQ 351
+ TG+ D T + + L +N+ + + +V+ S D ++ +W+ A +
Sbjct: 278 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATD 337
Query: 352 PKTR--MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
R + GH+ VN V F D +++ SAS D++IK+W+ +T +FV GH + ++
Sbjct: 338 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 395
Query: 410 F-ELIYCFRYPSNFYCVVDMSC--CMSLYSWSA--------DSRLLLSGSKDSTLKV 455
+ + + N + D+ C C+ + D++ ++SG+ D +KV
Sbjct: 396 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKV 452
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 226 (84.6 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 60/204 (29%), Positives = 104/204 (50%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C + GHT +VL + + D R + +GS D+TVR+WD+NT + H VL + +S
Sbjct: 259 CLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 316
Query: 160 ADGKHLVSGSKAGELQCWD--PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+G +V+ SK + WD T L GH+ + + ++ ++ VSAS
Sbjct: 317 -NGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI-------VSAS 367
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D ++W S + V L+GH + C+++ D ++ +GS D TI++W+ G +R L
Sbjct: 368 GDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVL 426
Query: 278 KGHGHWVNSLALSTEYALRTGAFD 301
+GH V + + + +GA+D
Sbjct: 427 EGHEELVRCIRFDNKRIV-SGAYD 449
Score = 213 (80.0 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 75/285 (26%), Positives = 132/285 (46%)
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
D ++ SG D ++++WD + + TGH VLC+ + D + +V+GS ++ WD
Sbjct: 236 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWD 293
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD------VSLRKC 232
TG+ N L H + + +HL V+ SKD +WD ++LR+
Sbjct: 294 VNTGEVL-NTLIHHNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRV 345
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
++ GH AV V + D I + S D TIKVW T+ + +R L GH + L
Sbjct: 346 LV---GHRAAVNVVDFD-DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 401
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP---ERLVSGSDDFTMFLWEPAVS 349
+ +G+ D+T + + LE + ++ +R+VSG+ D + +W+ +
Sbjct: 402 LVV-SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAA 460
Query: 350 KQPKTRMTGH--QQLVNH---VY-FSPDGQWVASASFDKSIKLWN 388
P+ + + LV H V+ D + S+S D +I +W+
Sbjct: 461 LDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 505
Score = 187 (70.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 55/206 (26%), Positives = 102/206 (49%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
+ +S +D +IWD + +C+ L+GHT +V C+++ + VI TGS D T++VW+ G
Sbjct: 239 KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRVWDVNTG 297
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY---SSPEEMKKAALERYN---KIK 325
+++ L H V L S + T + D + + S+ + + L + +
Sbjct: 298 EVLNTLIHHNEAVLHLRFSNGLMV-TCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 356
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ +VS S D T+ +W + + +T + GH++ + + + + V S S D +I+
Sbjct: 357 DFDDKYIVSASGDRTIKVWSTSTCEFVRT-LNGHKRGIACLQYRD--RLVVSGSSDNTIR 413
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFE 411
LW+ G + V GH V IRF+
Sbjct: 414 LWDIECGACLRVLEGHEELVRCIRFD 439
Score = 176 (67.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 54/194 (27%), Positives = 92/194 (47%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
E+V+ + + R+ VN T+ H EAVL + FS +G + S D ++ +WD
Sbjct: 277 ERVI-VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTC-SKDRSIAVWD 333
Query: 137 LNTQTPMFK---CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK 193
+ + T + GH+ V + + D K++VS S ++ W T + L+GHK
Sbjct: 334 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-FVRTLNGHK 390
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV 253
+ I + + R VS S D R+WD+ C+ L GH V C+++ +
Sbjct: 391 RGIACLQYRD-------RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI 443
Query: 254 IYTGSQDCTIKVWE 267
+ +G+ D IKVW+
Sbjct: 444 V-SGAYDGKIKVWD 456
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 58/237 (24%), Positives = 115/237 (48%)
Query: 235 CLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
C S ++ V C+++ + +I +G +D +IK+W+ T + ++ L GH V L E
Sbjct: 222 CRSENSKGVYCLQYDDEKII-SGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERV 279
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN---APERLVSGSDDFTMFLWEPAVSKQ 351
+ TG+ D T + + L +N+ + + +V+ S D ++ +W+ A +
Sbjct: 280 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATD 339
Query: 352 PKTR--MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
R + GH+ VN V F D +++ SAS D++IK+W+ +T +FV GH + ++
Sbjct: 340 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 397
Query: 410 F-ELIYCFRYPSNFYCVVDMSC--CMSLYSWSA--------DSRLLLSGSKDSTLKV 455
+ + + N + D+ C C+ + D++ ++SG+ D +KV
Sbjct: 398 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKV 454
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 226 (84.6 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 60/204 (29%), Positives = 104/204 (50%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C + GHT +VL + + D R + +GS D+TVR+WD+NT + H VL + +S
Sbjct: 260 CLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 317
Query: 160 ADGKHLVSGSKAGELQCWD--PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+G +V+ SK + WD T L GH+ + + ++ ++ VSAS
Sbjct: 318 -NGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI-------VSAS 368
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D ++W S + V L+GH + C+++ D ++ +GS D TI++W+ G +R L
Sbjct: 369 GDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVL 427
Query: 278 KGHGHWVNSLALSTEYALRTGAFD 301
+GH V + + + +GA+D
Sbjct: 428 EGHEELVRCIRFDNKRIV-SGAYD 450
Score = 213 (80.0 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 75/285 (26%), Positives = 132/285 (46%)
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
D ++ SG D ++++WD + + TGH VLC+ + D + +V+GS ++ WD
Sbjct: 237 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWD 294
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD------VSLRKC 232
TG+ N L H + + +HL V+ SKD +WD ++LR+
Sbjct: 295 VNTGEVL-NTLIHHNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRV 346
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
++ GH AV V + D I + S D TIKVW T+ + +R L GH + L
Sbjct: 347 LV---GHRAAVNVVDFD-DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 402
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP---ERLVSGSDDFTMFLWEPAVS 349
+ +G+ D+T + + LE + ++ +R+VSG+ D + +W+ +
Sbjct: 403 LVV-SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAA 461
Query: 350 KQPKTRMTGH--QQLVNH---VY-FSPDGQWVASASFDKSIKLWN 388
P+ + + LV H V+ D + S+S D +I +W+
Sbjct: 462 LDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 506
Score = 187 (70.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 55/206 (26%), Positives = 102/206 (49%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
+ +S +D +IWD + +C+ L+GHT +V C+++ + VI TGS D T++VW+ G
Sbjct: 240 KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRVWDVNTG 298
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY---SSPEEMKKAALERYN---KIK 325
+++ L H V L S + T + D + + S+ + + L + +
Sbjct: 299 EVLNTLIHHNEAVLHLRFSNGLMV-TCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 357
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ +VS S D T+ +W + + +T + GH++ + + + + V S S D +I+
Sbjct: 358 DFDDKYIVSASGDRTIKVWSTSTCEFVRT-LNGHKRGIACLQYRD--RLVVSGSSDNTIR 414
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFE 411
LW+ G + V GH V IRF+
Sbjct: 415 LWDIECGACLRVLEGHEELVRCIRFD 440
Score = 176 (67.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 54/194 (27%), Positives = 92/194 (47%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
E+V+ + + R+ VN T+ H EAVL + FS +G + S D ++ +WD
Sbjct: 278 ERVI-VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTC-SKDRSIAVWD 334
Query: 137 LNTQTPMFK---CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK 193
+ + T + GH+ V + + D K++VS S ++ W T + L+GHK
Sbjct: 335 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-FVRTLNGHK 391
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV 253
+ I + + R VS S D R+WD+ C+ L GH V C+++ +
Sbjct: 392 RGIACLQYRD-------RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI 444
Query: 254 IYTGSQDCTIKVWE 267
+ +G+ D IKVW+
Sbjct: 445 V-SGAYDGKIKVWD 457
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 58/237 (24%), Positives = 115/237 (48%)
Query: 235 CLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
C S ++ V C+++ + +I +G +D +IK+W+ T + ++ L GH V L E
Sbjct: 223 CRSENSKGVYCLQYDDEKII-SGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERV 280
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN---APERLVSGSDDFTMFLWEPAVSKQ 351
+ TG+ D T + + L +N+ + + +V+ S D ++ +W+ A +
Sbjct: 281 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATD 340
Query: 352 PKTR--MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
R + GH+ VN V F D +++ SAS D++IK+W+ +T +FV GH + ++
Sbjct: 341 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 398
Query: 410 F-ELIYCFRYPSNFYCVVDMSC--CMSLYSWSA--------DSRLLLSGSKDSTLKV 455
+ + + N + D+ C C+ + D++ ++SG+ D +KV
Sbjct: 399 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKV 455
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 226 (84.6 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 60/204 (29%), Positives = 104/204 (50%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C + GHT +VL + + D R + +GS D+TVR+WD+NT + H VL + +S
Sbjct: 272 CLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 329
Query: 160 ADGKHLVSGSKAGELQCWD--PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+G +V+ SK + WD T L GH+ + + ++ ++ VSAS
Sbjct: 330 -NGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI-------VSAS 380
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D ++W S + V L+GH + C+++ D ++ +GS D TI++W+ G +R L
Sbjct: 381 GDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVL 439
Query: 278 KGHGHWVNSLALSTEYALRTGAFD 301
+GH V + + + +GA+D
Sbjct: 440 EGHEELVRCIRFDNKRIV-SGAYD 462
Score = 212 (79.7 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 75/285 (26%), Positives = 133/285 (46%)
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
D ++ SG D ++++WD ++ + TGH VLC+ + D + +V+GS ++ WD
Sbjct: 249 DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWD 306
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD------VSLRKC 232
TG+ N L H + + +HL V+ SKD +WD ++LR+
Sbjct: 307 VNTGEVL-NTLIHHNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRV 358
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
++ GH AV V + D I + S D TIKVW T+ + +R L GH + L
Sbjct: 359 LV---GHRAAVNVVDFD-DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 414
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP---ERLVSGSDDFTMFLWEPAVS 349
+ +G+ D+T + + LE + ++ +R+VSG+ D + +W+ +
Sbjct: 415 LVV-SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAA 473
Query: 350 KQPKTRMTGH--QQLVNH---VY-FSPDGQWVASASFDKSIKLWN 388
P+ + + LV H V+ D + S+S D +I +W+
Sbjct: 474 LDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 518
Score = 190 (71.9 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 56/206 (27%), Positives = 102/206 (49%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
+ +S +D +IWD S +C+ L+GHT +V C+++ + VI TGS D T++VW+ G
Sbjct: 252 KIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRVWDVNTG 310
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY---SSPEEMKKAALERYN---KIK 325
+++ L H V L S + T + D + + S+ + + L + +
Sbjct: 311 EVLNTLIHHNEAVLHLRFSNGLMV-TCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 369
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ +VS S D T+ +W + + +T + GH++ + + + + V S S D +I+
Sbjct: 370 DFDDKYIVSASGDRTIKVWSTSTCEFVRT-LNGHKRGIACLQYRD--RLVVSGSSDNTIR 426
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFE 411
LW+ G + V GH V IRF+
Sbjct: 427 LWDIECGACLRVLEGHEELVRCIRFD 452
Score = 176 (67.0 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 54/194 (27%), Positives = 92/194 (47%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
E+V+ + + R+ VN T+ H EAVL + FS +G + S D ++ +WD
Sbjct: 290 ERVI-VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTC-SKDRSIAVWD 346
Query: 137 LNTQTPMFK---CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK 193
+ + T + GH+ V + + D K++VS S ++ W T + L+GHK
Sbjct: 347 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-FVRTLNGHK 403
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV 253
+ I + + R VS S D R+WD+ C+ L GH V C+++ +
Sbjct: 404 RGIACLQYRD-------RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI 456
Query: 254 IYTGSQDCTIKVWE 267
+ +G+ D IKVW+
Sbjct: 457 V-SGAYDGKIKVWD 469
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 58/237 (24%), Positives = 115/237 (48%)
Query: 235 CLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
C S ++ V C+++ D +I +G +D +IK+W+ + + ++ L GH V L E
Sbjct: 235 CRSENSKGVYCLQYDDDKII-SGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD-ERV 292
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN---APERLVSGSDDFTMFLWEPAVSKQ 351
+ TG+ D T + + L +N+ + + +V+ S D ++ +W+ A +
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATD 352
Query: 352 PKTR--MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
R + GH+ VN V F D +++ SAS D++IK+W+ +T +FV GH + ++
Sbjct: 353 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 410
Query: 410 F-ELIYCFRYPSNFYCVVDMSC--CMSLYSWSA--------DSRLLLSGSKDSTLKV 455
+ + + N + D+ C C+ + D++ ++SG+ D +KV
Sbjct: 411 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKV 467
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 226 (84.6 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 60/204 (29%), Positives = 104/204 (50%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C + GHT +VL + + D R + +GS D+TVR+WD+NT + H VL + +S
Sbjct: 272 CLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 329
Query: 160 ADGKHLVSGSKAGELQCWD--PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+G +V+ SK + WD T L GH+ + + ++ ++ VSAS
Sbjct: 330 -NGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI-------VSAS 380
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D ++W S + V L+GH + C+++ D ++ +GS D TI++W+ G +R L
Sbjct: 381 GDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVL 439
Query: 278 KGHGHWVNSLALSTEYALRTGAFD 301
+GH V + + + +GA+D
Sbjct: 440 EGHEELVRCIRFDNKRIV-SGAYD 462
Score = 213 (80.0 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 75/285 (26%), Positives = 132/285 (46%)
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
D ++ SG D ++++WD + + TGH VLC+ + D + +V+GS ++ WD
Sbjct: 249 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWD 306
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD------VSLRKC 232
TG+ N L H + + +HL V+ SKD +WD ++LR+
Sbjct: 307 VNTGEVL-NTLIHHNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRV 358
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
++ GH AV V + D I + S D TIKVW T+ + +R L GH + L
Sbjct: 359 LV---GHRAAVNVVDFD-DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 414
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP---ERLVSGSDDFTMFLWEPAVS 349
+ +G+ D+T + + LE + ++ +R+VSG+ D + +W+ +
Sbjct: 415 LVV-SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAA 473
Query: 350 KQPKTRMTGH--QQLVNH---VY-FSPDGQWVASASFDKSIKLWN 388
P+ + + LV H V+ D + S+S D +I +W+
Sbjct: 474 LDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 518
Score = 187 (70.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 55/206 (26%), Positives = 102/206 (49%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
+ +S +D +IWD + +C+ L+GHT +V C+++ + VI TGS D T++VW+ G
Sbjct: 252 KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRVWDVNTG 310
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY---SSPEEMKKAALERYN---KIK 325
+++ L H V L S + T + D + + S+ + + L + +
Sbjct: 311 EVLNTLIHHNEAVLHLRFSNGLMV-TCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 369
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ +VS S D T+ +W + + +T + GH++ + + + + V S S D +I+
Sbjct: 370 DFDDKYIVSASGDRTIKVWSTSTCEFVRT-LNGHKRGIACLQYRD--RLVVSGSSDNTIR 426
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFE 411
LW+ G + V GH V IRF+
Sbjct: 427 LWDIECGACLRVLEGHEELVRCIRFD 452
Score = 176 (67.0 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 54/194 (27%), Positives = 92/194 (47%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
E+V+ + + R+ VN T+ H EAVL + FS +G + S D ++ +WD
Sbjct: 290 ERVI-VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTC-SKDRSIAVWD 346
Query: 137 LNTQTPMFK---CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK 193
+ + T + GH+ V + + D K++VS S ++ W T + L+GHK
Sbjct: 347 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-FVRTLNGHK 403
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV 253
+ I + + R VS S D R+WD+ C+ L GH V C+++ +
Sbjct: 404 RGIACLQYRD-------RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI 456
Query: 254 IYTGSQDCTIKVWE 267
+ +G+ D IKVW+
Sbjct: 457 V-SGAYDGKIKVWD 469
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 58/237 (24%), Positives = 115/237 (48%)
Query: 235 CLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
C S ++ V C+++ + +I +G +D +IK+W+ T + ++ L GH V L E
Sbjct: 235 CRSENSKGVYCLQYDDEKII-SGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERV 292
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN---APERLVSGSDDFTMFLWEPAVSKQ 351
+ TG+ D T + + L +N+ + + +V+ S D ++ +W+ A +
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATD 352
Query: 352 PKTR--MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
R + GH+ VN V F D +++ SAS D++IK+W+ +T +FV GH + ++
Sbjct: 353 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 410
Query: 410 F-ELIYCFRYPSNFYCVVDMSC--CMSLYSWSA--------DSRLLLSGSKDSTLKV 455
+ + + N + D+ C C+ + D++ ++SG+ D +KV
Sbjct: 411 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKV 467
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 226 (84.6 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 60/204 (29%), Positives = 104/204 (50%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C + GHT +VL + + D R + +GS D+TVR+WD+NT + H VL + +S
Sbjct: 272 CLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 329
Query: 160 ADGKHLVSGSKAGELQCWD--PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+G +V+ SK + WD T L GH+ + + ++ ++ VSAS
Sbjct: 330 -NGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI-------VSAS 380
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D ++W S + V L+GH + C+++ D ++ +GS D TI++W+ G +R L
Sbjct: 381 GDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVL 439
Query: 278 KGHGHWVNSLALSTEYALRTGAFD 301
+GH V + + + +GA+D
Sbjct: 440 EGHEELVRCIRFDNKRIV-SGAYD 462
Score = 213 (80.0 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 75/285 (26%), Positives = 132/285 (46%)
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
D ++ SG D ++++WD + + TGH VLC+ + D + +V+GS ++ WD
Sbjct: 249 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWD 306
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD------VSLRKC 232
TG+ N L H + + +HL V+ SKD +WD ++LR+
Sbjct: 307 VNTGEVL-NTLIHHNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRV 358
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
++ GH AV V + D I + S D TIKVW T+ + +R L GH + L
Sbjct: 359 LV---GHRAAVNVVDFD-DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 414
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP---ERLVSGSDDFTMFLWEPAVS 349
+ +G+ D+T + + LE + ++ +R+VSG+ D + +W+ +
Sbjct: 415 LVV-SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAA 473
Query: 350 KQPKTRMTGH--QQLVNH---VY-FSPDGQWVASASFDKSIKLWN 388
P+ + + LV H V+ D + S+S D +I +W+
Sbjct: 474 LDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 518
Score = 187 (70.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 55/206 (26%), Positives = 102/206 (49%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
+ +S +D +IWD + +C+ L+GHT +V C+++ + VI TGS D T++VW+ G
Sbjct: 252 KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRVWDVNTG 310
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY---SSPEEMKKAALERYN---KIK 325
+++ L H V L S + T + D + + S+ + + L + +
Sbjct: 311 EVLNTLIHHNEAVLHLRFSNGLMV-TCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 369
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ +VS S D T+ +W + + +T + GH++ + + + + V S S D +I+
Sbjct: 370 DFDDKYIVSASGDRTIKVWSTSTCEFVRT-LNGHKRGIACLQYRD--RLVVSGSSDNTIR 426
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFE 411
LW+ G + V GH V IRF+
Sbjct: 427 LWDIECGACLRVLEGHEELVRCIRFD 452
Score = 176 (67.0 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 54/194 (27%), Positives = 92/194 (47%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
E+V+ + + R+ VN T+ H EAVL + FS +G + S D ++ +WD
Sbjct: 290 ERVI-VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTC-SKDRSIAVWD 346
Query: 137 LNTQTPMFK---CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK 193
+ + T + GH+ V + + D K++VS S ++ W T + L+GHK
Sbjct: 347 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-FVRTLNGHK 403
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV 253
+ I + + R VS S D R+WD+ C+ L GH V C+++ +
Sbjct: 404 RGIACLQYRD-------RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI 456
Query: 254 IYTGSQDCTIKVWE 267
+ +G+ D IKVW+
Sbjct: 457 V-SGAYDGKIKVWD 469
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 58/237 (24%), Positives = 115/237 (48%)
Query: 235 CLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
C S ++ V C+++ + +I +G +D +IK+W+ T + ++ L GH V L E
Sbjct: 235 CRSENSKGVYCLQYDDEKII-SGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERV 292
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN---APERLVSGSDDFTMFLWEPAVSKQ 351
+ TG+ D T + + L +N+ + + +V+ S D ++ +W+ A +
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATD 352
Query: 352 PKTR--MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
R + GH+ VN V F D +++ SAS D++IK+W+ +T +FV GH + ++
Sbjct: 353 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 410
Query: 410 F-ELIYCFRYPSNFYCVVDMSC--CMSLYSWSA--------DSRLLLSGSKDSTLKV 455
+ + + N + D+ C C+ + D++ ++SG+ D +KV
Sbjct: 411 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKV 467
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 201 (75.8 bits), Expect = 9.3e-16, Sum P(2) = 9.3e-16
Identities = 53/188 (28%), Positives = 86/188 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V A S D S S D T+RLWDL + GH + VL ++ S D +
Sbjct: 59 LTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ GH W++ + + P N FVSA D +
Sbjct: 119 QVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSP---NPDNLTFVSAGWDKAVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+WD+ GHT V+ V DG + +G +D T+ +W+ + + L+ +
Sbjct: 176 VWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKAN 235
Query: 283 WVNSLALS 290
+N+L S
Sbjct: 236 -INALVFS 242
Score = 169 (64.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 41/133 (30%), Positives = 69/133 (51%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT--GHKNWVLCIA 157
C+ GHT VLSV+ SPD RQ+ SGS D T+++W++ + T GH +WV C+
Sbjct: 97 CTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCK-YTITDGGHSDWVSCVR 155
Query: 158 WSADGKHL--VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+S + +L VS ++ WD +T + GH +++ ++ P + C S
Sbjct: 156 FSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHY-GHTGYVSAVTISPD--GSLC---AS 209
Query: 216 ASKDGDARIWDVS 228
+DG +WD++
Sbjct: 210 GGRDGTLMLWDLN 222
Score = 144 (55.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 55/188 (29%), Positives = 91/188 (48%)
Query: 236 LSGHTLAVTCVKWGGDG--VIYTGSQDCTIKVW-----ETTQGKLIRELKGHGHWVNSLA 288
L GH+ VT + + ++ +GS+D +I +W + G R L GH H+V+ A
Sbjct: 11 LEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCA 70
Query: 289 LS--TEYALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PE--RLVSGSDDFTM 341
LS + YAL + ++D T + + + E + + + + P+ ++VSGS D T+
Sbjct: 71 LSFDSHYAL-SASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTI 129
Query: 342 FLWEPAVSKQPKTRMT--GHQQLVNHVYFSP--DGQWVASASFDKSIKLWNGTTGKFVAV 397
+W + K +T GH V+ V FSP D SA +DK++K+W+ T
Sbjct: 130 KIWN--IIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTS 187
Query: 398 FRGHVGPV 405
GH G V
Sbjct: 188 HYGHTGYV 195
Score = 144 (55.7 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 53/188 (28%), Positives = 81/188 (43%)
Query: 97 VNRCSATIA--GHTEAVLSVAFSP--DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNW 152
+ C TI GH++ V V FSP D S D V++WDL T + GH +
Sbjct: 135 IGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGY 194
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
V + S DG SG + G L WD + L K I + + P N R
Sbjct: 195 VSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYS-LEA-KANINALVFSP---N---RY 246
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAV-------TCVK--WGGDG-VIYTGSQDCT 262
++ A+ RI+D+ ++ V L+ + V C+ W DG +++G D
Sbjct: 247 WLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSGWTDNL 306
Query: 263 IKVWETTQ 270
I+VW+ T+
Sbjct: 307 IRVWQVTK 314
Score = 143 (55.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 58/256 (22%), Positives = 108/256 (42%)
Query: 148 GHKNWVLCIAWSADGKH-LVSGSKAGELQCW----DPQTGKPSGNPLSGHKKWITGISWE 202
GH WV ++ + + L+SGS+ + W D + L+GH +++ +
Sbjct: 13 GHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCA-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
L+ +SAS D R+WD+ +C GHT V V D + +GS+D
Sbjct: 71 ---LSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDK 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTE---YALRTGAFDHTGKQYSSPE-EMKKA 316
TIK+W K GH WV+ + S + +D K + ++ +
Sbjct: 128 TIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTS 187
Query: 317 ALERYNKIKGN--APERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+ +P+ + SG D T+ LW+ +++ + +N + FSP+
Sbjct: 188 HYGHTGYVSAVTISPDGSLCASGGRDGTLMLWD--LNESTHLYSLEAKANINALVFSPNR 245
Query: 373 QWVASASFDKSIKLWN 388
W+ +A+ SI++++
Sbjct: 246 YWLCAAT-GSSIRIFD 260
Score = 130 (50.8 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 54/215 (25%), Positives = 95/215 (44%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW-----DVSLRKCVICLSGHTLAV 243
L GH W+T +S P + + +S S+D +W DV+ L+GH+ V
Sbjct: 11 LEGHSGWVTSLSTAPENPDI----LLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFV 66
Query: 244 T-CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ C + S D TI++W+ +G+ + GH V S+++S + + +G+ D
Sbjct: 67 SDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRD 126
Query: 302 HTGKQYSSPEEMKKAALERYNK-----IKGNA-PERL--VSGSDDFTMFLWEPAVSKQPK 353
T K ++ K + + ++ + P+ L VS D + +W+ +
Sbjct: 127 KTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSL-R 185
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
T GH V+ V SPDG AS D ++ LW+
Sbjct: 186 TSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWD 220
Score = 117 (46.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 329 PERLVSGSDDFTMFLW----EPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ L+SGS D ++ LW + + R+TGH V+ S D + SAS+DK+I
Sbjct: 28 PDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDKTI 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQI 408
+LW+ G+ F GH V +
Sbjct: 88 RLWDLEKGECTHQFVGHTSDVLSV 111
Score = 54 (24.1 bits), Expect = 9.3e-16, Sum P(2) = 9.3e-16
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKV 455
C+SL +WS D + L SG D+ ++V
Sbjct: 286 CISL-TWSPDGQTLFSGWTDNLIRV 309
Score = 53 (23.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 10/20 (50%), Positives = 16/20 (80%)
Query: 436 SWSADSRLLLSGSKDSTLKV 455
S S D+R ++SGS+D T+K+
Sbjct: 112 SISPDNRQVVSGSRDKTIKI 131
Score = 49 (22.3 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 368 FSPDGQWVASASFDKSIKLWNGT 390
+SPDGQ + S D I++W T
Sbjct: 291 WSPDGQTLFSGWTDNLIRVWQVT 313
Score = 38 (18.4 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 432 MSLYSWSADSRLLLSGSKDSTL 453
+S + S D L SG +D TL
Sbjct: 195 VSAVTISPDGSLCASGGRDGTL 216
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 219 (82.2 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 61/213 (28%), Positives = 106/213 (49%)
Query: 93 RIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNW 152
R +P+ C + HT + F D RQ+ + SGD T LWD+ T + + + H
Sbjct: 136 REQPIRVCRE-LNSHTGYLSCCRFLND-RQIVTSSGDMTCILWDVENGTKITEFSDHNGD 193
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
V+ ++ S D + +SG+ + WD ++GK +GH+ I + + P L+
Sbjct: 194 VMSVSVSPDKNYFISGACDATAKLWDLRSGK-CVQTFTGHEADINAVQYFPNGLS----- 247
Query: 213 FVSASKDGDARIWDVSL-RKCVICLSGHTLA-VTCVKWGGDG-VIYTGSQDCTIKVWETT 269
F + S D R++D+ R+ + + L +T V + G ++ G D T VW+T
Sbjct: 248 FGTGSDDASCRLFDIRADRELMQYTHDNILCGITSVGFSFSGRFLFAGYDDFTCNVWDTL 307
Query: 270 QGKLIRELKGHGHWVNSLALSTE-YALRTGAFD 301
+G+ + L GHG+ V+ L + T+ AL TG++D
Sbjct: 308 KGERVLSLTGHGNRVSCLGVPTDGMALCTGSWD 340
Score = 169 (64.5 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 69/266 (25%), Positives = 114/266 (42%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDP-QTGKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W+ D HLVS S+ G+L WD T K PL W+ ++ P
Sbjct: 60 GHLAKIYAMHWAEDNVHLVSASQDGKLLVWDGLTTNKVHAIPL--RSSWVMTCAYSPTAN 117
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVW 266
C + + R + +R C L+ HT ++C ++ D I T S D T +W
Sbjct: 118 FVACGGLDNICSIYNLRSREQPIRVCRE-LNSHTGYLSCCRFLNDRQIVTSSGDMTCILW 176
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTE--YALRTGAFDHTGKQYSSPEEMKKAALERYNKI 324
+ G I E H V S+++S + Y + +GA D T K + K ++
Sbjct: 177 DVENGTKITEFSDHNGDVMSVSVSPDKNYFI-SGACDATAKLWDL-RSGKCVQTFTGHEA 234
Query: 325 KGNA----PERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQL---VNHVYFSPDGQWV 375
NA P L +GSDD + L++ ++ + T H + + V FS G+++
Sbjct: 235 DINAVQYFPNGLSFGTGSDDASCRLFDIRADRE-LMQYT-HDNILCGITSVGFSFSGRFL 292
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGH 401
+ D + +W+ G+ V GH
Sbjct: 293 FAGYDDFTCNVWDTLKGERVLSLTGH 318
Score = 169 (64.5 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 65/296 (21%), Positives = 125/296 (42%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH + ++ ++ D L S S D + +WD T + +WV+ A+S
Sbjct: 58 LKGHLAKIYAMHWAEDNVHLVSASQDGKLLVWDGLTTNKVHAIPLRSSWVMTCAYSPTAN 117
Query: 164 HLVSGSKAGELQCWDPQTGK-PSG--NPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ G ++ ++ + P L+ H +++ + LN R+ V++S D
Sbjct: 118 FVACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRF----LND--RQIVTSSGDM 171
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKG 279
+WDV + S H V V D +G+ D T K+W+ GK ++ G
Sbjct: 172 TCILWDVENGTKITEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKCVQTFTG 231
Query: 280 HGHWVNSLA-LSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG------NAPER- 331
H +N++ + TG+ D + + + + + N + G + R
Sbjct: 232 HEADINAVQYFPNGLSFGTGSDDASCRLFDIRADRELMQYTHDNILCGITSVGFSFSGRF 291
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
L +G DDFT +W+ ++ + +TGH V+ + DG + + S+D +K+W
Sbjct: 292 LFAGYDDFTCNVWDTLKGERVLS-LTGHGNRVSCLGVPTDGMALCTGSWDSLLKIW 346
Score = 149 (57.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 50/187 (26%), Positives = 78/187 (41%)
Query: 236 LSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
L GH + + W D V + + SQD + VW+ + + WV + A S T
Sbjct: 58 LKGHLAKIYAMHWAEDNVHLVSASQDGKLLVWDGLTTNKVHAIPLRSSWVMTCAYSPTAN 117
Query: 294 ALRTGAFDHTGKQYS--SPEEMKKAALERYNKIKGNAP-------ERLVSGSDDFTMFLW 344
+ G D+ Y+ S E+ + E N G ++V+ S D T LW
Sbjct: 118 FVACGGLDNICSIYNLRSREQPIRVCRE-LNSHTGYLSCCRFLNDRQIVTSSGDMTCILW 176
Query: 345 EPAVSKQPK-TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
+ V K T + H V V SPD + S + D + KLW+ +GK V F GH
Sbjct: 177 D--VENGTKITEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEA 234
Query: 404 PVYQIRF 410
+ +++
Sbjct: 235 DINAVQY 241
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 222 (83.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 55/161 (34%), Positives = 82/161 (50%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GH EAV SV + D +L S S D T+RLWD T +G K + CI++S
Sbjct: 251 TLSGHNEAVSSVLWM-DADELCSASWDHTIRLWDAETGGQKSTLSGSKVFN-CISYSPLC 308
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ L SGS ++ WDP++ G L+ H W+T + W P H + + VS S D
Sbjct: 309 RRLASGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRWAPSHEH----QLVSGSLDN 364
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V C W +G+I +G D
Sbjct: 365 VVKLWDTRSCKAPLYDLAAHEDKVLCADWTENGLILSGGAD 405
Score = 165 (63.1 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 46/148 (31%), Positives = 70/148 (47%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GH V + W D L S S ++ WD +TG LSG K +
Sbjct: 245 TRTPLMTLSGHNEAVSSVLWM-DADELCSASWDHTIRLWDAETGGQKST-LSGSKVF-NC 301
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK---CVICLSGHTLAVTCVKWGG--DGV 253
IS+ P+ CRR S S D R+WD + ++ L+ H VT V+W +
Sbjct: 302 ISYSPL-----CRRLASGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRWAPSHEHQ 356
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGH 280
+ +GS D +K+W+T K + +L H
Sbjct: 357 LVSGSLDNVVKLWDTRSCKAPLYDLAAH 384
Score = 144 (55.7 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 54/210 (25%), Positives = 98/210 (46%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--- 248
H WI+ + A ++ S D ARIW + K V+ ++GH V V W
Sbjct: 100 HDDWISSVE-------ADSEWILTGSYDKTARIWSME-GKAVMTVAGHADVVKDVAWVKR 151
Query: 249 -GGDGVIYTGSQDCTIKVWE--TTQGKL-IREL-KGHGHWVNSLALS-TEYALRTGAFDH 302
G + V+ T S D T+ +WE + + K+ R +GH V+++A+ T +G++D
Sbjct: 152 DGLNSVLLTASLDQTVMLWEWNSERNKVKARHCCRGHAGSVDTIAVDPTRTKFCSGSWDK 211
Query: 303 TGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
K +S+ ++ +E N+ P + + +++ P ++GH +
Sbjct: 212 MLKIWSAVPTEEEDEIEEPNR-----PRKKQKTE--------QMGLTRTPLMTLSGHNEA 258
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
V+ V + D + SAS+D +I+LW+ TG
Sbjct: 259 VSSVLWM-DADELCSASWDHTIRLWDAETG 287
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 33/104 (31%), Positives = 55/104 (52%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTP---MFKCTGHKNWVLCIAW 158
+T++G ++ +++SP R+LASGS D VRLWD ++ + T H WV + W
Sbjct: 291 STLSG-SKVFNCISYSPLCRRLASGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRW 349
Query: 159 SADGKH-LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
+ +H LVSGS ++ WD ++ K L+ H+ + W
Sbjct: 350 APSHEHQLVSGSLDNVVKLWDTRSCKAPLYDLAAHEDKVLCADW 393
Score = 124 (48.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 51/210 (24%), Positives = 85/210 (40%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLN----NEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P ++ LS ++NKLL + + + F + L L ++E +S E+V
Sbjct: 21 PFSIPASSEVADLSGVINKLLEAKNAGHKHVEFDFLVRGQFLRTSLDKHIETENISTEEV 80
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ I Y + F C H + + SV D + +GS D T R+W + +
Sbjct: 81 VEIEYVEK--FTAPQPEECIM----HDDWISSV--EADSEWILTGSYDKTARIWSMEGKA 132
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWD--PQTGKPSGNPLS-GHKKW 195
M GH + V +AW DG + L++ S + W+ + K GH
Sbjct: 133 VM-TVAGHADVVKDVAWVKRDGLNSVLLTASLDQTVMLWEWNSERNKVKARHCCRGHAGS 191
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+ I+ +P +F S S D +IW
Sbjct: 192 VDTIAVDPTRT-----KFCSGSWDKMLKIW 216
Score = 99 (39.9 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER---YNKIKGNAP--ER 331
L GH V+S+ L + ++DHT + + + +K+ L +N I +P R
Sbjct: 252 LSGHNEAVSSVLWMDADELCSASWDHTIRLWDAETGGQKSTLSGSKVFNCIS-YSPLCRR 310
Query: 332 LVSGSDDFTMFLWEPAVSKQPKT---RMTGHQQLVNHVYFSPDGQW-VASASFDKSIKLW 387
L SGS D + LW+P SK +T H V V ++P + + S S D +KLW
Sbjct: 311 LASGSTDRHVRLWDPR-SKDGSLVLLSLTSHNGWVTAVRWAPSHEHQLVSGSLDNVVKLW 369
Query: 388 N 388
+
Sbjct: 370 D 370
Score = 85 (35.0 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 39/145 (26%), Positives = 64/145 (44%)
Query: 230 RKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
R ++ LSGH AV+ V W + + S D TI++W+ G L G + N ++
Sbjct: 246 RTPLMTLSGHNEAVSSVLWMDADELCSASWDHTIRLWDAETGGQKSTLSGSKVF-NCISY 304
Query: 290 STEYA-LRTGAFDHTGKQY---SSPEEMKKAALERYN----KIKGNAPE---RLVSGSDD 338
S L +G+ D + + S + +L +N ++ AP +LVSGS D
Sbjct: 305 SPLCRRLASGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRW-APSHEHQLVSGSLD 363
Query: 339 FTMFLWEPAVSKQPKTRMTGHQQLV 363
+ LW+ K P + H+ V
Sbjct: 364 NVVKLWDTRSCKAPLYDLAAHEDKV 388
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 225 (84.3 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 74/248 (29%), Positives = 116/248 (46%)
Query: 68 GSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCS--ATIAGHTEAVLSVAFSPDGRQLAS 125
G+ L++ VS E V + + +++ + AT++GHT+ V V F P GR LAS
Sbjct: 259 GATLQESNVSAESVNLATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLAS 318
Query: 126 GSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKP- 184
S DT+ RLWD+ +T + GH V ++++ DG L S + + WD +TG+
Sbjct: 319 ASEDTSWRLWDVEKRTELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTI 378
Query: 185 ---SGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTL 241
G+ + GH K I + W + R +SAS DG + WDV + + HT
Sbjct: 379 MILDGH-MDGHIKPIYALDW-----GSDGHRVLSASADGWIKCWDVRKVQRTGGVGAHTS 432
Query: 242 AVTCVKW--GGDGVIYTG---SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR 296
AV+ ++W G DG + G D + G + G H VN + + ++AL
Sbjct: 433 AVSDMRWFKGLDGPL-DGVPLGVDEKGQAMPKKSGTFLVS-SGFDHKVNIYS-ADDWALV 489
Query: 297 TGAFDHTG 304
HTG
Sbjct: 490 QSLSGHTG 497
Score = 200 (75.5 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 74/285 (25%), Positives = 121/285 (42%)
Query: 117 SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQC 176
S + LA+G + V LW L+ TP+ +GH V + + G+ L S S+ +
Sbjct: 268 SAESVNLATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASEDTSWRL 327
Query: 177 WDPQTGKPSGNPLS-GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVIC 235
WD + K + L GH + + +S+ N SA +D RIWD+ + ++
Sbjct: 328 WDVE--KRTELLLQEGHSRGVFAVSF-----NGDGSLLASAGQDSIGRIWDLRTGRTIMI 380
Query: 236 LSGHT----LAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS 290
L GH + + WG DG + + S D IK W+ + ++ G G ++++
Sbjct: 381 LDGHMDGHIKPIYALDWGSDGHRVLSASADGWIKCWDVRK---VQRTGGVGAHTSAVSDM 437
Query: 291 TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSK 350
+ G D G E K A+ K G LVS D + ++ A
Sbjct: 438 RWFKGLDGPLD--GVPLGVDE--KGQAMP---KKSGTF---LVSSGFDHKVNIYS-ADDW 486
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
++GH V V S DG+W+ S D+++KLW G+ V
Sbjct: 487 ALVQSLSGHTGPVASVDVSRDGRWIVSGGHDRTVKLWGRNDGEGV 531
Score = 184 (69.8 bits), Expect = 5.2e-13, Sum P(3) = 5.2e-13
Identities = 58/201 (28%), Positives = 91/201 (45%)
Query: 117 SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW-----------SADGKHL 165
SP+G +A+G+ V+L+ + GH N V + W SA+ +L
Sbjct: 215 SPNGETVATGNWGGQVKLFSIPNLDETMNLRGHTNKVSGMCWFPGATLQESNVSAESVNL 274
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGDARI 224
+G G++ W P LSGH + + + + H P RF+ SAS+D R+
Sbjct: 275 ATGGAEGQVNLWSLSQDTPLAT-LSGHTQRVCRVDF---H---PSGRFLASASEDTSWRL 327
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGH--G 281
WDV R ++ GH+ V V + GDG ++ + QD ++W+ G+ I L GH G
Sbjct: 328 WDVEKRTELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDG 387
Query: 282 HWVNSLALSTEYALRTGAFDH 302
H + YAL G+ H
Sbjct: 388 H------IKPIYALDWGSDGH 402
Score = 58 (25.5 bits), Expect = 5.2e-13, Sum P(3) = 5.2e-13
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
G ++ S+ FD + +++ V GH GPV +
Sbjct: 466 GTFLVSSGFDHKVNIYSADDWALVQSLSGHTGPVASV 502
Score = 41 (19.5 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 438 SADSRLLLSGSKDSTLKV 455
S D R ++SG D T+K+
Sbjct: 505 SRDGRWIVSGGHDRTVKL 522
Score = 39 (18.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 437 WSADSRLLLSGSKDSTLK 454
W +D +LS S D +K
Sbjct: 397 WGSDGHRVLSASADGWIK 414
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 221 (82.9 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 63/201 (31%), Positives = 94/201 (46%)
Query: 95 RPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
RP + S T GH ++ V F P + S S D T+R+WD T GH + V
Sbjct: 97 RPPEKFSLT--GHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQ 154
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+A+ A GK L S S ++ WD Q + GH ++ +++ P +
Sbjct: 155 DVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAG-----DYVL 209
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKL 273
SAS+D ++W+V+ CV +GH V V+ +G I+ T S D TI+VW T
Sbjct: 210 SASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDC 269
Query: 274 IRELKGHGHWVNSLALSTEYA 294
EL+ H H V +A + E A
Sbjct: 270 KVELRDHEHTVECIAWAPEAA 290
Score = 193 (73.0 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 69/267 (25%), Positives = 122/267 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSAD 161
++ GHT++V VAF G+ LAS S D +++LWD K GH + V +A+
Sbjct: 145 SLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPA 204
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWE-PVHLNAPC------RRFV 214
G +++S S+ ++ W+ TG +GH++W+ + + A C R ++
Sbjct: 205 GDYVLSASRDRTIKMWEVATGY-CVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWL 263
Query: 215 SASKDGDARIWDVSLR-KCVICLSGHTLAVTCVKWGGDG--------VIYTGSQDCTIKV 265
+ SKD + D +C+ + G D + +GS+D TI++
Sbjct: 264 TNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRI 323
Query: 266 WETTQGKLIRELKGHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEE--MKKAALERY 321
W+ + G + L GH +WV LA +Y L + + D T + + + MK ++
Sbjct: 324 WDVSVGLCLLTLSGHDNWVRGLAFHPGGKY-LVSASDDKTIRVWDLRNKRCMKTLYAHQH 382
Query: 322 --NKIKGN-APERLVSGSDDFTMFLWE 345
I + A ++SGS D T+ +WE
Sbjct: 383 FCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 78/331 (23%), Positives = 138/331 (41%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
F TGH+ + + + +VS S+ ++ WD +TG+ + L GH + ++++
Sbjct: 102 FSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERS-LKGHTDSVQDVAFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLR-KCVICLSGHTLAVTCVKW--GGDGVIYTGSQD 260
A + S S D ++WD +C+ + GH V+ V + GD V+ + S+D
Sbjct: 160 ----AQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVL-SASRD 214
Query: 261 CTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALE 319
TIK+WE G ++ GH WV + + E ++ T + D T + + + + K L
Sbjct: 215 RTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELR 274
Query: 320 RYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ E V W P + G H G ++AS S
Sbjct: 275 DH--------EHTVE------CIAWAPEAAASAINEAAGADNKKGH----HQGPFLASGS 316
Query: 380 FDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRYPS-NFYCVVDMSCCMS 433
DK+I++W+ + G + GH V + F L+ + + + + C +
Sbjct: 317 RDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKT 376
Query: 434 LYSW-----SADSR----LLLSGSKDSTLKV 455
LY+ S D ++SGS D T+KV
Sbjct: 377 LYAHQHFCTSIDFHKAHPYVISGSVDQTVKV 407
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 97 VNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
V C T++GH V +AF P G+ L S S D T+R+WDL + M H+++ I
Sbjct: 328 VGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSI 387
Query: 157 AWSADGKHLVSGSKAGELQCWD 178
+ +++SGS ++ W+
Sbjct: 388 DFHKAHPYVISGSVDQTVKVWE 409
>CGD|CAL0004633 [details] [associations]
symbol:orf19.7343 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004633 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AACQ01000069 KO:K12662 RefSeq:XP_716477.1
ProteinModelPortal:Q5A3W6 STRING:Q5A3W6 GeneID:3641939
KEGG:cal:CaO19.7343 Uniprot:Q5A3W6
Length = 458
Score = 176 (67.0 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 47/180 (26%), Positives = 85/180 (47%)
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQG 271
F+S DG IWD+ + ++ L H V C+ W +G + TGS DC++K+W+
Sbjct: 285 FMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDWSPNGYQFVTGSGDCSLKIWD---- 340
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPEEMKKAALERYNKIKG---N 327
+R+L+ + ++ L T F H + ++ ++ + + + G N
Sbjct: 341 --LRKLENNNSNNELYSIPAHTKLITDVKFYHQSRDIMQKQQQQQDQQQDQDHLLGSEFN 398
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
+ LVS S D + +W + K+ + GH V + G+W+ S+ +D+SIKLW
Sbjct: 399 DGKFLVSCSYDGDVNIWSSDNWIKIKS-LRGHTDKVMSCDINSTGKWIVSSGWDRSIKLW 457
Score = 127 (49.8 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 32/108 (29%), Positives = 47/108 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C GH++ + + PDG SG D V +WDL + + H V C+ W
Sbjct: 261 QCLVEQEGHSKPIFTGEIHPDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDW 320
Query: 159 SADGKHLVSGSKAGELQCWDPQT--GKPSGNPL---SGHKKWITGISW 201
S +G V+GS L+ WD + S N L H K IT + +
Sbjct: 321 SPNGYQFVTGSGDCSLKIWDLRKLENNNSNNELYSIPAHTKLITDVKF 368
Score = 118 (46.6 bits), Expect = 0.00061, P = 0.00061
Identities = 45/157 (28%), Positives = 65/157 (41%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT---QTPMFKCT----GHKNWVLCIAWS 159
H + + F P + S S D T +LWDLN Q +C GH +
Sbjct: 220 HNDRITKTLFHPINNLIISTSFDQTWKLWDLNKLSGQRDDLQCLVEQEGHSKPIFTGEIH 279
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
DG +SG G + WD ++G+ S L H + + W P N +FV+ S D
Sbjct: 280 PDGGLFMSGGLDGIVHIWDLRSGR-SIVTLQKHMAGVYCLDWSP---NG--YQFVTGSGD 333
Query: 220 GDARIWDVSLRKC--------VICLSGHTLAVTCVKW 248
+IWD LRK + + HT +T VK+
Sbjct: 334 CSLKIWD--LRKLENNNSNNELYSIPAHTKLITDVKF 368
Score = 107 (42.7 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 50/225 (22%), Positives = 93/225 (41%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR-------KCVICLSGHTLAVT 244
H IT + P++ N +S S D ++WD++ +C++ GH+ +
Sbjct: 220 HNDRITKTLFHPIN-NL----IISTSFDQTWKLWDLNKLSGQRDDLQCLVEQEGHSKPIF 274
Query: 245 CVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDH 302
+ DG ++ +G D + +W+ G+ I L+ H V L S Y TG+ D
Sbjct: 275 TGEIHPDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDWSPNGYQFVTGSGDC 334
Query: 303 TGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
+ K + +++K N + P +D F + Q + + QQ
Sbjct: 335 SLKIW----DLRKLENNNSNNELYSIPAHTKLITD--VKFYHQSRDIMQKQQQQQDQQQD 388
Query: 363 VNHVYFSP--DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
+H+ S DG+++ S S+D + +W+ + RGH V
Sbjct: 389 QDHLLGSEFNDGKFLVSCSYDGDVNIWSSDNWIKIKSLRGHTDKV 433
Score = 92 (37.4 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 26/91 (28%), Positives = 44/91 (48%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT-PMFKCT--G-HKNWVLCI 156
S I G T + ++ S + + +A GS D ++ L LN+Q +FK T G H + +
Sbjct: 104 SQFIPGTTRTISNIKISNNDKYIACGSWDGSINL--LNSQDLSIFKKTPSGFHNEKISGL 161
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGN 187
+W+ + LVSG G + W+ + N
Sbjct: 162 SWNNNDNQLVSGGNEGTINIWNVNENNNNNN 192
Score = 62 (26.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSG-HKKWITGISWEPVHLNAPCRRFVSAS 217
S + K++ GS G + + Q SG H + I+G+SW N + VS
Sbjct: 120 SNNDKYIACGSWDGSINLLNSQDLSIFKKTPSGFHNEKISGLSW-----NNNDNQLVSGG 174
Query: 218 KDGDARIWDVS 228
+G IW+V+
Sbjct: 175 NEGTINIWNVN 185
>UNIPROTKB|Q5A3W6 [details] [associations]
symbol:PRP4 "Potential spliceosomal U4/U6 snRNP protein
Prp4p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004633 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AACQ01000069 KO:K12662 RefSeq:XP_716477.1
ProteinModelPortal:Q5A3W6 STRING:Q5A3W6 GeneID:3641939
KEGG:cal:CaO19.7343 Uniprot:Q5A3W6
Length = 458
Score = 176 (67.0 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 47/180 (26%), Positives = 85/180 (47%)
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQG 271
F+S DG IWD+ + ++ L H V C+ W +G + TGS DC++K+W+
Sbjct: 285 FMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDWSPNGYQFVTGSGDCSLKIWD---- 340
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPEEMKKAALERYNKIKG---N 327
+R+L+ + ++ L T F H + ++ ++ + + + G N
Sbjct: 341 --LRKLENNNSNNELYSIPAHTKLITDVKFYHQSRDIMQKQQQQQDQQQDQDHLLGSEFN 398
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
+ LVS S D + +W + K+ + GH V + G+W+ S+ +D+SIKLW
Sbjct: 399 DGKFLVSCSYDGDVNIWSSDNWIKIKS-LRGHTDKVMSCDINSTGKWIVSSGWDRSIKLW 457
Score = 127 (49.8 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 32/108 (29%), Positives = 47/108 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C GH++ + + PDG SG D V +WDL + + H V C+ W
Sbjct: 261 QCLVEQEGHSKPIFTGEIHPDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDW 320
Query: 159 SADGKHLVSGSKAGELQCWDPQT--GKPSGNPL---SGHKKWITGISW 201
S +G V+GS L+ WD + S N L H K IT + +
Sbjct: 321 SPNGYQFVTGSGDCSLKIWDLRKLENNNSNNELYSIPAHTKLITDVKF 368
Score = 118 (46.6 bits), Expect = 0.00061, P = 0.00061
Identities = 45/157 (28%), Positives = 65/157 (41%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT---QTPMFKCT----GHKNWVLCIAWS 159
H + + F P + S S D T +LWDLN Q +C GH +
Sbjct: 220 HNDRITKTLFHPINNLIISTSFDQTWKLWDLNKLSGQRDDLQCLVEQEGHSKPIFTGEIH 279
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
DG +SG G + WD ++G+ S L H + + W P N +FV+ S D
Sbjct: 280 PDGGLFMSGGLDGIVHIWDLRSGR-SIVTLQKHMAGVYCLDWSP---NG--YQFVTGSGD 333
Query: 220 GDARIWDVSLRKC--------VICLSGHTLAVTCVKW 248
+IWD LRK + + HT +T VK+
Sbjct: 334 CSLKIWD--LRKLENNNSNNELYSIPAHTKLITDVKF 368
Score = 107 (42.7 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 50/225 (22%), Positives = 93/225 (41%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR-------KCVICLSGHTLAVT 244
H IT + P++ N +S S D ++WD++ +C++ GH+ +
Sbjct: 220 HNDRITKTLFHPIN-NL----IISTSFDQTWKLWDLNKLSGQRDDLQCLVEQEGHSKPIF 274
Query: 245 CVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDH 302
+ DG ++ +G D + +W+ G+ I L+ H V L S Y TG+ D
Sbjct: 275 TGEIHPDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDWSPNGYQFVTGSGDC 334
Query: 303 TGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
+ K + +++K N + P +D F + Q + + QQ
Sbjct: 335 SLKIW----DLRKLENNNSNNELYSIPAHTKLITD--VKFYHQSRDIMQKQQQQQDQQQD 388
Query: 363 VNHVYFSP--DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
+H+ S DG+++ S S+D + +W+ + RGH V
Sbjct: 389 QDHLLGSEFNDGKFLVSCSYDGDVNIWSSDNWIKIKSLRGHTDKV 433
Score = 92 (37.4 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 26/91 (28%), Positives = 44/91 (48%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT-PMFKCT--G-HKNWVLCI 156
S I G T + ++ S + + +A GS D ++ L LN+Q +FK T G H + +
Sbjct: 104 SQFIPGTTRTISNIKISNNDKYIACGSWDGSINL--LNSQDLSIFKKTPSGFHNEKISGL 161
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGN 187
+W+ + LVSG G + W+ + N
Sbjct: 162 SWNNNDNQLVSGGNEGTINIWNVNENNNNNN 192
Score = 62 (26.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSG-HKKWITGISWEPVHLNAPCRRFVSAS 217
S + K++ GS G + + Q SG H + I+G+SW N + VS
Sbjct: 120 SNNDKYIACGSWDGSINLLNSQDLSIFKKTPSGFHNEKISGLSW-----NNNDNQLVSGG 174
Query: 218 KDGDARIWDVS 228
+G IW+V+
Sbjct: 175 NEGTINIWNVN 185
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 226 (84.6 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 75/274 (27%), Positives = 129/274 (47%)
Query: 123 LASGSGDTTVRLWDLNTQTPMFKCT----GHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
L +G D ++R++D +Q +C GH+ V I ++ ++L SGS ++ WD
Sbjct: 473 LFTGCSDNSIRVYDYKSQN--MECVQTLKGHEGPVESICYN--DQYLFSGSSDHSIKVWD 528
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGDARIWDVSLRKCVICLS 237
+ + L GH K PVH +++ S S D ++WD+ +C L
Sbjct: 529 LKKLRCIFT-LEGHDK--------PVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLE 579
Query: 238 GHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLA-LSTEYALR 296
H AV + G +++GS D TIKVW+ + LKGH WV ++ L T L
Sbjct: 580 SHARAVKTLCISGQ-YLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTN--LY 636
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGN---APERLVSGSDDFTMFLWEPAVSKQPK 353
+G++D T + ++ A L +++ + + L + SDD T+ +W+ + +
Sbjct: 637 SGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICDKLLFTASDDNTIKIWD-LETLRCN 695
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
T + GH V + D + V S S D+SI++W
Sbjct: 696 TTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 215 (80.7 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 62/193 (32%), Positives = 93/193 (48%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV--LCI 156
RC T+ GH + V +V + + L SGS D T+++WDL T + H V LCI
Sbjct: 533 RCIFTLEGHDKPVHTVLLND--KYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCI 590
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ G++L SGS ++ WD +T + L GH KW+T I +L S
Sbjct: 591 S----GQYLFSGSNDKTIKVWDLKTFR-CNYTLKGHTKWVTTICILGTNL-------YSG 638
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRE 276
S D R+W++ +C L GH V + D +++T S D TIK+W+ +
Sbjct: 639 SYDKTIRVWNLKSLECSATLRGHDRWVEHMVIC-DKLLFTASDDNTIKIWDLETLRCNTT 697
Query: 277 LKGHGHWVNSLAL 289
L+GH V LA+
Sbjct: 698 LEGHNATVQCLAV 710
Score = 213 (80.0 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 73/282 (25%), Positives = 126/282 (44%)
Query: 45 LLNNEEKLPYAFYISDHELLVPL-GSYLEKHKVSVEKVLSIVYQPQA--VFRIRPVN-RC 100
L+NN++K + + +L+ + G ++ H + +L + V+ + N C
Sbjct: 437 LINNKKK--ESINLETIKLIETIKGYHVTSHLCICDNLLFTGCSDNSIRVYDYKSQNMEC 494
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
T+ GH V S+ ++ + L SGS D ++++WDL +F GH V +
Sbjct: 495 VQTLKGHEGPVESICYND--QYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVL--L 550
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ K+L SGS ++ WD +T + L H + + + +L S S D
Sbjct: 551 NDKYLFSGSSDKTIKVWDLKTLECKYT-LESHARAVKTLCISGQYL-------FSGSNDK 602
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ +C L GHT VT + G +Y+GS D TI+VW + L+GH
Sbjct: 603 TIKVWDLKTFRCNYTLKGHTKWVTTICILGTN-LYSGSYDKTIRVWNLKSLECSATLRGH 661
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYN 322
WV + + + L T + D+T K + LE +N
Sbjct: 662 DRWVEHMVICDKL-LFTASDDNTIKIWDLETLRCNTTLEGHN 702
Score = 212 (79.7 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 53/170 (31%), Positives = 82/170 (48%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV--LCIA 157
C T+ H AV ++ S G+ L SGS D T+++WDL T + GH WV +CI
Sbjct: 574 CKYTLESHARAVKTLCIS--GQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICIL 631
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
G +L SGS ++ W+ ++ + S L GH +W+ H+ + +AS
Sbjct: 632 ----GTNLYSGSYDKTIRVWNLKSLECSAT-LRGHDRWVE-------HMVICDKLLFTAS 679
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVK-WGGDGVIYTGSQDCTIKVW 266
D +IWD+ +C L GH V C+ W + + S D +I+VW
Sbjct: 680 DDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 179 (68.1 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 58/194 (29%), Positives = 100/194 (51%)
Query: 213 FVSASKDGDARIWDVSLR--KCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQ 270
F S D R++D + +CV L GH V + + D +++GS D +IKVW+ +
Sbjct: 474 FTGCS-DNSIRVYDYKSQNMECVQTLKGHEGPVESICYN-DQYLFSGSSDHSIKVWDLKK 531
Query: 271 GKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNK-IKGN-- 327
+ I L+GH V+++ L+ +Y L +G+ D T K + K LE + + +K
Sbjct: 532 LRCIFTLEGHDKPVHTVLLNDKY-LFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCI 590
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
+ + L SGS+D T+ +W+ + T + GH + V + G + S S+DK+I++W
Sbjct: 591 SGQYLFSGSNDKTIKVWDLKTFRCNYT-LKGHTKWVTTICIL--GTNLYSGSYDKTIRVW 647
Query: 388 NGTTGKFVAVFRGH 401
N + + A RGH
Sbjct: 648 NLKSLECSATLRGH 661
Score = 178 (67.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 67/252 (26%), Positives = 106/252 (42%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L GH+ + I + +L F S S D ++WD+ +C+ L GH V V
Sbjct: 498 LKGHEGPVESICYNDQYL------F-SGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLL 550
Query: 249 GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
D +++GS D TIKVW+ + L+ H V +L +S +Y L +G+ D T K +
Sbjct: 551 N-DKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQY-LFSGSNDKTIKVWD 608
Query: 309 SPEEMKKAALERYNKIKGNA---PERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNH 365
L+ + K L SGS D T+ +W S + + GH + V H
Sbjct: 609 LKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWN-LKSLECSATLRGHDRWVEH 667
Query: 366 VYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCV 425
+ + + +AS D +IK+W+ T + GH V C + CV
Sbjct: 668 MVICD--KLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQ--------CLAVWEDKKCV 717
Query: 426 VDMSCCMSLYSW 437
+ S S+ W
Sbjct: 718 ISCSHDQSIRVW 729
Score = 149 (57.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 62/242 (25%), Positives = 113/242 (46%)
Query: 231 KCVICLSG-HTLAVTCVKWGGDGVIYTGSQDCTIKVWE-TTQG-KLIRELKGHGHWVNSL 287
K + + G H + C+ D +++TG D +I+V++ +Q + ++ LKGH V S+
Sbjct: 452 KLIETIKGYHVTSHLCIC---DNLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESI 508
Query: 288 ALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA---PERLVSGSDDFTMFLW 344
+ +Y L +G+ DH+ K + + LE ++K + L SGS D T+ +W
Sbjct: 509 CYNDQY-LFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDKYLFSGSSDKTIKVW 567
Query: 345 EPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGP 404
+ + + K + H + V + S GQ++ S S DK+IK+W+ T + +GH
Sbjct: 568 D-LKTLECKYTLESHARAVKTLCIS--GQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKW 624
Query: 405 VYQIRF--ELIYCFRYPSNF--YCVVDMSCCMSLYS---WSAD----SRLLLSGSKDSTL 453
V I +Y Y + + + C +L W +LL + S D+T+
Sbjct: 625 VTTICILGTNLYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICDKLLFTASDDNTI 684
Query: 454 KV 455
K+
Sbjct: 685 KI 686
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 223 (83.6 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 72/271 (26%), Positives = 130/271 (47%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C + GHT +VL + + D R + +GS D+TVR+WD+NT + H VL + ++
Sbjct: 236 CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 293
Query: 160 ADGKHLVSGSKAGELQCWD--PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+G +V+ SK + WD T L GH+ + + ++ ++ VSAS
Sbjct: 294 -NGM-MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYI-------VSAS 344
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D ++W+ S + V L+GH + C+++ D ++ +GS D TI++W+ G +R L
Sbjct: 345 GDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVL 403
Query: 278 KGHGHWVNSLALSTEYALRTGAFDHTGKQYS-----SPEEMK-----KAALERYNKI-KG 326
+GH V + + + +GA+D K + P + +E ++ +
Sbjct: 404 EGHEELVRCIRFDNKRIV-SGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFRL 462
Query: 327 NAPE-RLVSGSDDFTMFLWE----PAVSKQP 352
E ++VS S D T+ +W+ PA +P
Sbjct: 463 QFDEFQIVSSSHDDTILIWDFLNDPAAQAEP 493
Score = 215 (80.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 77/286 (26%), Positives = 133/286 (46%)
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
D +++ SG D T+++WD +T TGH VLC+ + D + +++GS ++ WD
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWD 270
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD------VSLRKC 232
TG+ N L H + + +HL V+ SKD +WD ++LR+
Sbjct: 271 VNTGEML-NTLIHHCEAV-------LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRV 322
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
++ GH AV V + D I + S D TIKVW T+ + +R L GH + L
Sbjct: 323 LV---GHRAAVNVVDFD-DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR 378
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP---ERLVSGSDDFTMFLWEPAVS 349
+ +G+ D+T + + LE + ++ +R+VSG+ D + +W+ +
Sbjct: 379 LVV-SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLIAA 437
Query: 350 KQPKTRMTGH---QQLVNH---VY-FSPDGQWVASASFDKSIKLWN 388
P+ G + LV H V+ D + S+S D +I +W+
Sbjct: 438 LDPRAP-AGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 482
Score = 191 (72.3 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 57/207 (27%), Positives = 104/207 (50%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQ 270
++ VS +D +IWD S +C L+GHT +V C+++ + VI TGS D T++VW+
Sbjct: 215 QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD-ERVIITGSSDSTVRVWDVNT 273
Query: 271 GKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY--SSPEEMKKAALERYNKIKGNA 328
G+++ L H V L + + T + D + + +SP ++ + ++ N
Sbjct: 274 GEMLNTLIHHCEAVLHLRFNNGMMV-TCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 332
Query: 329 PE----RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+ +VS S D T+ +W + + +T + GH++ + + + + V S S D +I
Sbjct: 333 VDFDDKYIVSASGDRTIKVWNTSTCEFVRT-LNGHKRGIACLQYRD--RLVVSGSSDNTI 389
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQIRFE 411
+LW+ G + V GH V IRF+
Sbjct: 390 RLWDIECGACLRVLEGHEELVRCIRFD 416
Score = 175 (66.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 54/194 (27%), Positives = 94/194 (48%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
E+V+ I + R+ VN T+ H EAVL + F+ +G + + S D ++ +WD
Sbjct: 254 ERVI-ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWD 310
Query: 137 LNTQTPMFK---CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK 193
+ + T + GH+ V + + D K++VS S ++ W+ T + L+GHK
Sbjct: 311 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE-FVRTLNGHK 367
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV 253
+ I + + R VS S D R+WD+ C+ L GH V C+++ +
Sbjct: 368 RGIACLQYRD-------RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI 420
Query: 254 IYTGSQDCTIKVWE 267
+ +G+ D IKVW+
Sbjct: 421 V-SGAYDGKIKVWD 433
Score = 165 (63.1 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 65/245 (26%), Positives = 118/245 (48%)
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL 287
SL++ + C S + V C+++ D I +G +D TIK+W+ + + R L GH V L
Sbjct: 193 SLQR-IHCRSETSKGVYCLQYD-DQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCL 250
Query: 288 ALSTEYALRTGAFDHTGKQYS-SPEEMKKAAL---ERYNKIKGNAPERLVSGSDDFTMFL 343
E + TG+ D T + + + EM + E ++ N +V+ S D ++ +
Sbjct: 251 QYD-ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG-MMVTCSKDRSIAV 308
Query: 344 WEPAVSKQPKTR--MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
W+ A R + GH+ VN V F D +++ SAS D++IK+WN +T +FV GH
Sbjct: 309 WDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGH 366
Query: 402 VGPVYQIRF-ELIYCFRYPSNFYCVVDMSC--CMSLYSWSA--------DSRLLLSGSKD 450
+ +++ + + N + D+ C C+ + D++ ++SG+ D
Sbjct: 367 KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYD 426
Query: 451 STLKV 455
+KV
Sbjct: 427 GKIKV 431
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 224 (83.9 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 88/309 (28%), Positives = 144/309 (46%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT-------QTPMFKCTGHKNWVLCIAWS 159
HT + V FS DG+ LA+G + ++++ T Q K G +V +A+S
Sbjct: 298 HTSVICYVRFSADGKFLATGCNRAAM-VFNVETGKLITLLQEESSKREGDL-YVRSVAFS 355
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
DGK+L +G + +++ WD K L+GH++ I + + + + VS S D
Sbjct: 356 PDGKYLATGVEDQQIRIWDIAQ-KRVYRLLTGHEQEIYSLDF-----SKDGKTLVSGSGD 409
Query: 220 GDARIWDVSLRKCVICLSGHTL-AVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL 277
+WDV + + L HT VT V + DG I GS D I++W T+ G L+ +L
Sbjct: 410 RTVCLWDVEAGEQKLIL--HTDDGVTTVMFSPDGQFIAAGSLDKVIRIW-TSSGTLVEQL 466
Query: 278 KGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS-------SPEEMKKAAL--ERYNKIKGN 327
GH V S+A S + L +G+ D+T K + +P K+ + + + K
Sbjct: 467 HGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDF 526
Query: 328 ------APER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+P+ ++SGS D T+ W P S + + GH V V SP+G A+ S
Sbjct: 527 ILSVTVSPDGKWIISGSKDRTIQFWSPD-SPHSQLTLQGHNNSVISVAVSPNGHCFATGS 585
Query: 380 FDKSIKLWN 388
D ++W+
Sbjct: 586 GDLRARIWS 594
Score = 195 (73.7 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 71/276 (25%), Positives = 124/276 (44%)
Query: 153 VLC-IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCR 211
V+C + +SADGK L +G + ++ +TGK K + V + +
Sbjct: 301 VICYVRFSADGKFLATGCNRAAM-VFNVETGKLITLLQEESSKREGDLYVRSVAFSPDGK 359
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQ 270
+ +D RIWD++ ++ L+GH + + + DG + +GS D T+ +W+
Sbjct: 360 YLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEA 419
Query: 271 G--KLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSP----EEMKKAALERYNK 323
G KLI G V ++ S + + G+ D + ++S E++ Y+
Sbjct: 420 GEQKLILHTDD-G--VTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSV 476
Query: 324 IKGNAPERLVSGSDDFTMFLWE--------PAVSKQP---KTRMTGHQQLVNHVYFSPDG 372
+ LVSGS D T+ LWE P++ K+ K TGH+ + V SPDG
Sbjct: 477 AFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDG 536
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
+W+ S S D++I+ W+ + +GH V +
Sbjct: 537 KWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISV 572
Score = 186 (70.5 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 63/220 (28%), Positives = 103/220 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKN-WVLCIAWSADG 162
+ GH + + S+ FS DG+ L SGSGD TV LWD+ K H + V + +S DG
Sbjct: 384 LTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQ--KLILHTDDGVTTVMFSPDG 441
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ + +GS ++ W +G L GH++ + +++ P + VS S D
Sbjct: 442 QFIAAGSLDKVIRIWT-SSGTLV-EQLHGHEESVYSVAFSP-----DGKYLVSGSLDNTI 494
Query: 223 RIWDV--------SLRK----CVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETT 269
++W++ S+ K C +GH + V DG I +GS+D TI+ W
Sbjct: 495 KLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPD 554
Query: 270 QGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYS 308
L+GH + V S+A+S + TG+ D + +S
Sbjct: 555 SPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWS 594
Score = 141 (54.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 42/140 (30%), Positives = 68/140 (48%)
Query: 41 IVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPV--- 97
+V +L +EE + Y+ S P G YL S++ + + ++ Q V + P
Sbjct: 462 LVEQLHGHEESV-YSVAFS------PDGKYLVSG--SLDNTIKL-WELQCVSNVAPSMYK 511
Query: 98 --NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T GH + +LSV SPDG+ + SGS D T++ W ++ GH N V+
Sbjct: 512 EGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVIS 571
Query: 156 IAWSADGKHLVSGSKAGELQ 175
+A S +G +GS G+L+
Sbjct: 572 VAVSPNGHCFATGS--GDLR 589
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 222 (83.2 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 73/297 (24%), Positives = 129/297 (43%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH V SVAF P +GS D T+++WD+ T TGH V +A S
Sbjct: 166 LQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHT 225
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
++ S +++CWD + K + GH + ++ P L+ ++ +D R
Sbjct: 226 YMFSAGDDKQVKCWDLEQNKVIRS-YHGHLHGVYCLALHPT-LDV----VLTGGRDSVCR 279
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
+WD+ + + L + + + D + TGS D TIK W+ GK + + H
Sbjct: 280 VWDIRTKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKT 339
Query: 284 VNSLALST-EYALRTGAFDHTGKQYSSPE-EM--KKAALER--YNKIKGNAPERLVSGSD 337
V ++AL E + + D+ K++S P+ E +L+R N + N +V+G D
Sbjct: 340 VRAMALHPKENDFVSASADNI-KKFSLPKGEFCHNMLSLQRDIINAVAVNEDGVMVTGGD 398
Query: 338 DFTMFLWEPAVSKQPKTRMT----GHQQLVNHVY---FSPDGQWVASASFDKSIKLW 387
++ W+ + T G + +Y + G + + DK+IK+W
Sbjct: 399 KGGLWFWDWKSGHNFQRAETIVQPGSLESEAGIYAACYDQTGSRLVTCEGDKTIKMW 455
Score = 144 (55.7 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 56/236 (23%), Positives = 97/236 (41%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
N+ + GH V +A P + +G D+ R+WD+ T+ +F H + V +
Sbjct: 244 NKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSVL 302
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+++GS ++ WD + GK ++ HKK + ++ P + FVSAS
Sbjct: 303 ARPTDPQVITGSHDSTIKFWDLRYGKSMAT-ITNHKKTVRAMALHPKEND-----FVSAS 356
Query: 218 KDGDARIWDVSLRKCVIC---LSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLI 274
D I SL K C LS + V DGV+ TG + W+ G
Sbjct: 357 ADN---IKKFSLPKGEFCHNMLSLQRDIINAVAVNEDGVMVTGGDKGGLWFWDWKSGHNF 413
Query: 275 RELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPE 330
+ + V +L +E + +D TG + + E K ++ + + + PE
Sbjct: 414 QRAETI---VQPGSLESEAGIYAACYDQTGSRLVTCEGDK--TIKMWKEDEDATPE 464
WARNING: HSPs involving 1367 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 456 456 0.00094 118 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1617
No. of states in DFA: 625 (66 KB)
Total size of DFA: 335 KB (2165 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 41.07u 0.10s 41.17t Elapsed: 00:00:01
Total cpu time: 41.23u 0.10s 41.33t Elapsed: 00:00:02
Start: Sat May 11 13:50:21 2013 End: Sat May 11 13:50:23 2013
WARNINGS ISSUED: 2